Psyllid ID: psy14815
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 479 | 2.2.26 [Sep-21-2011] | |||||||
| Q17GR9 | 337 | Probable cytosolic iron-s | N/A | N/A | 0.643 | 0.913 | 0.588 | 1e-118 | |
| B4GDM7 | 335 | Probable cytosolic iron-s | N/A | N/A | 0.653 | 0.934 | 0.580 | 1e-116 | |
| Q292E8 | 335 | Probable cytosolic iron-s | yes | N/A | 0.653 | 0.934 | 0.580 | 1e-116 | |
| B4MY77 | 335 | Probable cytosolic iron-s | N/A | N/A | 0.651 | 0.931 | 0.582 | 1e-116 | |
| B4P7Q3 | 335 | Probable cytosolic iron-s | N/A | N/A | 0.651 | 0.931 | 0.576 | 1e-116 | |
| B3NQR5 | 335 | Probable cytosolic iron-s | N/A | N/A | 0.651 | 0.931 | 0.573 | 1e-116 | |
| Q7K1Y4 | 335 | Probable cytosolic iron-s | yes | N/A | 0.651 | 0.931 | 0.573 | 1e-115 | |
| B3MC74 | 335 | Probable cytosolic iron-s | N/A | N/A | 0.643 | 0.919 | 0.577 | 1e-115 | |
| B4QFZ8 | 335 | Probable cytosolic iron-s | N/A | N/A | 0.651 | 0.931 | 0.570 | 1e-115 | |
| B4HRQ6 | 335 | Probable cytosolic iron-s | N/A | N/A | 0.651 | 0.931 | 0.567 | 1e-114 |
| >sp|Q17GR9|CIAO1_AEDAE Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Aedes aegypti GN=Ciao1 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 424 bits (1091), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/343 (58%), Positives = 251/343 (73%), Gaps = 35/343 (10%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
Q L GH+GR W W+P+G ++++CGEDK IR+W
Sbjct: 8 QCLTGHRGRAWGAGWHPKGNVLATCGEDKTIRIWA------------------------- 42
Query: 65 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 124
E ++ AK +LSDGH RTIR+ AWSPCG ++ASASFDAT A+WDK+SG+F
Sbjct: 43 --------EDASQRWVAKTVLSDGHSRTIRDVAWSPCGQYLASASFDATVAIWDKKSGEF 94
Query: 125 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 184
ECNATLEGHENEVKSV+WSK+G LATCSRDKSVWVWEV +EDEYECAAV+N H QDVKK
Sbjct: 95 ECNATLEGHENEVKSVSWSKSGSLLATCSRDKSVWVWEVAQEDEYECAAVLNTHTQDVKK 154
Query: 185 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244
V +HP ++ILASASYD+T+KL+KED A++DW +F TL SH STVWS++FD G+RLA+CS
Sbjct: 155 VEWHPHEDILASASYDNTIKLYKEDLADSDWSSFDTLVSHESTVWSISFDGSGNRLASCS 214
Query: 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 304
DD TVKIW+EYKPGN G+ PDN VWKCVCTL+G+H R++YDISWC + L+ATACGD
Sbjct: 215 DDQTVKIWQEYKPGNEFGVSCPDNTPVWKCVCTLAGYHSRSVYDISWCKQSGLLATACGD 274
Query: 305 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347
D +RIFKE E +F++V ++H AH+QDVN V WNP V
Sbjct: 275 DMVRIFKE-VEGSSPHEPTFEMVGSKH-AHSQDVNTVEWNPTV 315
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Aedes aegypti (taxid: 7159) |
| >sp|B4GDM7|CIAO1_DROPE Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila persimilis GN=Ciao1 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 420 bits (1079), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/348 (58%), Positives = 246/348 (70%), Gaps = 35/348 (10%)
Query: 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQ 60
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W +
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLS------------------- 44
Query: 61 LVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR 120
GN ++ K ILSDGH+RTIRE WSPCG ++ASASFDATTA+W K
Sbjct: 45 ---------------GNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKS 89
Query: 121 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ 180
SG+FECNATLEGHENEVKSV+WS++G LATCSRDKSVW+WEV +DE+ECAAV+NAH Q
Sbjct: 90 SGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQ 149
Query: 181 DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240
DVK+V +HP +ILASASYD+T+K+F E + ++DW ATL SHTSTVWS+ FD G RL
Sbjct: 150 DVKRVVWHPTKDILASASYDNTIKMFAESQLDSDWDCTATLSSHTSTVWSIDFDAEGDRL 209
Query: 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT 300
+CSDD T+KIW+ Y PGN AGI TPD SVWKCVCTLSG H R IYD+SWC LT LIAT
Sbjct: 210 VSCSDDKTLKIWRAYHPGNDAGIATPDKQSVWKCVCTLSGQHSRAIYDVSWCKLTGLIAT 269
Query: 301 ACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP 348
CGDD IRIFKE ++ D +F+ + E AH QDVN V WNP V
Sbjct: 270 GCGDDGIRIFKETSDS-KRDEPTFEQLTAEETAHEQDVNAVEWNPAVA 316
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila persimilis (taxid: 7234) |
| >sp|Q292E8|CIAO1_DROPS Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila pseudoobscura pseudoobscura GN=Ciao1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/348 (58%), Positives = 246/348 (70%), Gaps = 35/348 (10%)
Query: 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQ 60
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W +
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLS------------------- 44
Query: 61 LVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR 120
GN ++ K ILSDGH+RTIRE WSPCG ++ASASFDATTA+W K
Sbjct: 45 ---------------GNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKS 89
Query: 121 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ 180
SG+FECNATLEGHENEVKSV+WS++G LATCSRDKSVW+WEV +DE+ECAAV+NAH Q
Sbjct: 90 SGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQ 149
Query: 181 DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240
DVK+V +HP +ILASASYD+T+K+F E + ++DW ATL SHTSTVWS+ FD G RL
Sbjct: 150 DVKRVVWHPTKDILASASYDNTIKMFAESQLDSDWDCTATLSSHTSTVWSIDFDAEGDRL 209
Query: 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT 300
+CSDD T+KIW+ Y PGN AGI TPD SVWKCVCTLSG H R IYD+SWC LT LIAT
Sbjct: 210 VSCSDDKTLKIWRAYHPGNDAGIATPDKQSVWKCVCTLSGQHSRAIYDVSWCKLTGLIAT 269
Query: 301 ACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP 348
CGDD IRIFKE ++ D +F+ + E AH QDVN V WNP V
Sbjct: 270 GCGDDGIRIFKETSDS-KRDEPTFEQLTAEETAHEQDVNAVEWNPAVA 316
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila pseudoobscura pseudoobscura (taxid: 46245) |
| >sp|B4MY77|CIAO1_DROWI Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila willistoni GN=Ciao1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/347 (58%), Positives = 245/347 (70%), Gaps = 35/347 (10%)
Query: 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQ 60
+I TL+GH+GR+W V+W+P+G +SCGEDK IR+W +
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNTFASCGEDKAIRIWSLS------------------- 44
Query: 61 LVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR 120
GN ++ K ILSDGH+RTIRE WSPCG ++ASASFDATTA+W K
Sbjct: 45 ---------------GNSWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKS 89
Query: 121 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ 180
SG+FECNATLEGHENEVKSV+WSK+G LATCSRDKSVW+WEV +DE+ECAAV+N H Q
Sbjct: 90 SGEFECNATLEGHENEVKSVSWSKSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQ 149
Query: 181 DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240
DVK+V +HP ILASASYD+T+K+F E ++DW ATL SHTSTVWS+ FD G RL
Sbjct: 150 DVKRVVWHPTKEILASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSIDFDADGERL 209
Query: 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT 300
+CSDD T+KIW+ Y PGN AG+ TPD +VWKCVCTLSG H R IYD+SWC LT LIAT
Sbjct: 210 VSCSDDTTLKIWRAYHPGNDAGVATPDKQTVWKCVCTLSGQHSRAIYDVSWCKLTGLIAT 269
Query: 301 ACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347
ACGDD IRIFKE+ ++ D +F+ V E AH QDVN V WNPV+
Sbjct: 270 ACGDDGIRIFKESSDS-KRDEPTFEQVTAEESAHEQDVNSVEWNPVM 315
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila willistoni (taxid: 7260) |
| >sp|B4P7Q3|CIAO1_DROYA Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila yakuba GN=Ciao1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/347 (57%), Positives = 247/347 (71%), Gaps = 35/347 (10%)
Query: 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQ 60
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W +
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLT------------------- 44
Query: 61 LVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR 120
GN ++ K ILSDGH+RTIRE WSPCG ++ASASFDATTA+W K
Sbjct: 45 ---------------GNTWSTKTILSDGHKRTIREIQWSPCGQYLASASFDATTAIWSKS 89
Query: 121 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ 180
SG+FECNATLEGHENEVKSV+WS++G LATCSRDKSVW+WEV +DE+ECAAV+N+H Q
Sbjct: 90 SGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQ 149
Query: 181 DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240
DVK+V +HP ILASASYD+T+K++ E+ + DW ATL SHTST+W + FD G RL
Sbjct: 150 DVKRVVWHPTKEILASASYDNTIKMYAEEPIDNDWDCTATLTSHTSTIWGIDFDADGERL 209
Query: 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT 300
+CSDD TVKIW+ Y PGNSAG+ TPD +VWKCVCTLSG H R IYD+SWC LT LIAT
Sbjct: 210 VSCSDDTTVKIWRAYHPGNSAGVATPDQQTVWKCVCTLSGQHSRAIYDVSWCKLTGLIAT 269
Query: 301 ACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347
ACGDD IRIFKE ++ D +F+ + E AH+QDVN V WNPVV
Sbjct: 270 ACGDDGIRIFKETSDS-KPDEPTFEQLTAEESAHDQDVNSVQWNPVV 315
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila yakuba (taxid: 7245) |
| >sp|B3NQR5|CIAO1_DROER Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila erecta GN=Ciao1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 418 bits (1074), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/347 (57%), Positives = 247/347 (71%), Gaps = 35/347 (10%)
Query: 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQ 60
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W +
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLT------------------- 44
Query: 61 LVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR 120
G+ ++ K ILSDGH+RTIRE WSPCG ++ASASFDATTA+W K
Sbjct: 45 ---------------GSTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKS 89
Query: 121 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ 180
SG+FECNATLEGHENEVKSV+WS++G LATCSRDKSVW+WEV +DE+ECAAV+N+H Q
Sbjct: 90 SGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQ 149
Query: 181 DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240
DVK+V +HP +LASASYD+T+K++ ED + DW ATL SHTST+W + FD G RL
Sbjct: 150 DVKRVVWHPTKEVLASASYDNTIKMYAEDPVDNDWDCTATLTSHTSTIWGIDFDADGERL 209
Query: 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT 300
+CSDD T+KIWK Y PGNSAG+ TPD +VWKCVCTLSG H R IYD+SWC LT LIAT
Sbjct: 210 VSCSDDTTIKIWKAYHPGNSAGVATPDQQTVWKCVCTLSGQHSRAIYDVSWCKLTGLIAT 269
Query: 301 ACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347
ACGDD IRIFKE ++ D +F+ + E AH+QDVN V WNPVV
Sbjct: 270 ACGDDGIRIFKETSDS-KPDEPTFEQLTAEEGAHDQDVNSVQWNPVV 315
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila erecta (taxid: 7220) |
| >sp|Q7K1Y4|CIAO1_DROME Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila melanogaster GN=Ciao1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/347 (57%), Positives = 248/347 (71%), Gaps = 35/347 (10%)
Query: 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQ 60
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W +
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLT------------------- 44
Query: 61 LVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR 120
GN ++ K ILSDGH+RTIRE WSPCG ++ASASFDATTA+W K
Sbjct: 45 ---------------GNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKS 89
Query: 121 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ 180
SG+FECNATLEGHENEVKSV+WS++G LATCSRDKSVW+WEV +DE+ECAAV+N H Q
Sbjct: 90 SGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQ 149
Query: 181 DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240
DVK+V +HP +ILASASYD+T+K+F E+ + DW ATL SHTSTVW + FD G RL
Sbjct: 150 DVKRVVWHPTKDILASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFDADGERL 209
Query: 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT 300
+CSDD T+KIW+ Y PGN+AG+ TPD +VWKCVCT+SG H R IYD+SWC LT LIAT
Sbjct: 210 VSCSDDTTIKIWRAYHPGNTAGVATPDQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIAT 269
Query: 301 ACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347
ACGDD IRIFKE+ ++ D +F+ + E AH+QDVN V WNPVV
Sbjct: 270 ACGDDGIRIFKESSDS-KPDEPTFEQITAEEGAHDQDVNSVQWNPVV 315
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila melanogaster (taxid: 7227) |
| >sp|B3MC74|CIAO1_DROAN Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila ananassae GN=Ciao1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/343 (57%), Positives = 245/343 (71%), Gaps = 35/343 (10%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
TL+GH+GR+W V+W+P+G + +SCGEDK IR+W +
Sbjct: 8 HTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSL------------------------ 43
Query: 65 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 124
GN +T K ILSDGH+RTIRE WSPCG ++ASASFD TTA+W K SG+F
Sbjct: 44 ----------NGNTWTTKTILSDGHKRTIREIRWSPCGQYLASASFDGTTAIWSKSSGEF 93
Query: 125 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 184
ECNATLEGHENEVKSV+WS++G LATCSRDKSVW+WEV +DE+ECAAV+N H QDVK+
Sbjct: 94 ECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKR 153
Query: 185 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244
V +HP +LASASYD+T+K+F ED ++DW ATL SHTSTVWS+ FD G RL +CS
Sbjct: 154 VVWHPTKELLASASYDNTIKMFAEDALDSDWDCVATLSSHTSTVWSIDFDATGERLVSCS 213
Query: 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 304
DD ++KIW+ Y PGN AG+ TPD +VWKCVCT+SG H R IYD+SWC LT+LIATACGD
Sbjct: 214 DDTSLKIWQAYHPGNDAGVATPDKQTVWKCVCTISGQHSRAIYDVSWCKLTNLIATACGD 273
Query: 305 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347
D IRIFKE ++ D +F+ + E AH+QDVN V WNPVV
Sbjct: 274 DGIRIFKETSDS-KRDEPTFEQLTAEEGAHDQDVNSVEWNPVV 315
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila ananassae (taxid: 7217) |
| >sp|B4QFZ8|CIAO1_DROSI Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila simulans GN=Ciao1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/347 (57%), Positives = 247/347 (71%), Gaps = 35/347 (10%)
Query: 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQ 60
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W +
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLT------------------- 44
Query: 61 LVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR 120
GN ++ K ILSDGH+RTIRE WSPCG ++ASASFDATTA+W K
Sbjct: 45 ---------------GNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKS 89
Query: 121 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ 180
SG+FECNATLEGHENEVKSV+WS++G LATCSRDKSVW+WEV +DE+ECAAV+N H Q
Sbjct: 90 SGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQ 149
Query: 181 DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240
DVK+V +HP ++LASASYD+T+K+F E+ + DW ATL SHTSTVW + FD G RL
Sbjct: 150 DVKRVVWHPTKDVLASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFDADGERL 209
Query: 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT 300
+CSDD T+KIWK Y PGN+AG+ TP+ +VWKCVCT+SG H R IYD+SWC LT LIAT
Sbjct: 210 VSCSDDTTIKIWKAYHPGNTAGVATPEQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIAT 269
Query: 301 ACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347
ACGDD IRIFKE ++ D +F+ + E AH+QDVN V WNPVV
Sbjct: 270 ACGDDGIRIFKETSDS-KPDEPTFEQITAEEGAHDQDVNSVQWNPVV 315
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila simulans (taxid: 7240) |
| >sp|B4HRQ6|CIAO1_DROSE Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila sechellia GN=Ciao1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 414 bits (1063), Expect = e-114, Method: Compositional matrix adjust.
Identities = 197/347 (56%), Positives = 246/347 (70%), Gaps = 35/347 (10%)
Query: 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQ 60
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W +
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLT------------------- 44
Query: 61 LVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR 120
GN + K ILSDGH+RTIRE WSPCG ++ASASFDATTA+W K
Sbjct: 45 ---------------GNTWGTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKS 89
Query: 121 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ 180
SG+FECNATLEGHENEVKSV+WS++G LATCSRDKSVW+WEV +DE+ECAAV+N H Q
Sbjct: 90 SGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQ 149
Query: 181 DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240
DVK+V +HP ++LASASYD+T+K+F E+ + DW ATL SHTSTVW + FD G RL
Sbjct: 150 DVKRVVWHPTKDVLASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFDADGERL 209
Query: 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT 300
+CSDD T+KIW+ Y PGN+AG+ TP+ +VWKCVCT+SG H R IYD+SWC LT LIAT
Sbjct: 210 VSCSDDTTIKIWRAYHPGNTAGVATPEQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIAT 269
Query: 301 ACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347
ACGDD IRIFKE ++ D +F+ + E AH+QDVN V WNPVV
Sbjct: 270 ACGDDGIRIFKETSDS-KPDEPTFEQITAEEGAHDQDVNSVQWNPVV 315
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila sechellia (taxid: 7238) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 479 | ||||||
| 322798691 | 581 | hypothetical protein SINV_00781 [Solenop | 0.883 | 0.728 | 0.565 | 1e-152 | |
| 332019251 | 386 | Putative cytosolic iron-sulfur protein a | 0.643 | 0.797 | 0.630 | 1e-120 | |
| 307197840 | 334 | Protein CIAO1 [Harpegnathos saltator] | 0.643 | 0.922 | 0.622 | 1e-118 | |
| 383862289 | 356 | PREDICTED: probable cytosolic iron-sulfu | 0.643 | 0.865 | 0.627 | 1e-118 | |
| 156545541 | 334 | PREDICTED: probable cytosolic iron-sulfu | 0.643 | 0.922 | 0.613 | 1e-118 | |
| 307187516 | 337 | Protein CIAO1 [Camponotus floridanus] | 0.645 | 0.916 | 0.619 | 1e-117 | |
| 380019245 | 334 | PREDICTED: probable cytosolic iron-sulfu | 0.643 | 0.922 | 0.613 | 1e-116 | |
| 157132872 | 337 | wd-repeat protein [Aedes aegypti] gi|122 | 0.643 | 0.913 | 0.588 | 1e-116 | |
| 357623147 | 336 | hypothetical protein KGM_22505 [Danaus p | 0.638 | 0.910 | 0.615 | 1e-115 | |
| 328790407 | 334 | PREDICTED: probable cytosolic iron-sulfu | 0.643 | 0.922 | 0.604 | 1e-115 |
| >gi|322798691|gb|EFZ20289.1| hypothetical protein SINV_00781 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 272/481 (56%), Positives = 341/481 (70%), Gaps = 58/481 (12%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
Q+L GH+GRVW+V W+P+G ++SCGED
Sbjct: 18 QSLIGHRGRVWSVCWHPKGASLASCGED-------------------------------- 45
Query: 65 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 124
K I +WG E G K+ K IL++GH RTIRE AWSPCGN+IASASFDAT AVWDK+SGQF
Sbjct: 46 KRIIIWGLE--GPKWVTKMILTEGHSRTIRELAWSPCGNYIASASFDATIAVWDKKSGQF 103
Query: 125 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 184
ECN TLEGHENEVKSV+WS +GQ LATCSRDKSVWVWEV +DEYECAAVINAH QDVKK
Sbjct: 104 ECNTTLEGHENEVKSVSWSMSGQLLATCSRDKSVWVWEV-NDDEYECAAVINAHTQDVKK 162
Query: 185 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244
VR+HP + ILASASYD+TVK+FKED A++DW ATL SHTSTVWSL++D+IG+R+ATCS
Sbjct: 163 VRWHPHEEILASASYDNTVKIFKEDAADSDWSCIATLSSHTSTVWSLSWDKIGNRIATCS 222
Query: 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 304
DD TVKIW+EYKPGN GI TP+N+S+WKC+CTLSG+H RTIYDI WC T L+ TACGD
Sbjct: 223 DDETVKIWREYKPGNDMGIVTPNNESIWKCICTLSGYHTRTIYDIDWCKTTGLLVTACGD 282
Query: 305 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP---------------- 348
D IRIFKE+ + D +F +V + RAH+QDVNC+ WNP +P
Sbjct: 283 DIIRIFKEDSDC-DPHQPNFTMVCSIDRAHDQDVNCIQWNPTIPGQLASASDDSLYKTIR 341
Query: 349 -----EPQKTNLTLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTD 403
K + L+DV++ + A SLA WDNVGLL+EP K + NI+LT DLT+
Sbjct: 342 TMSQIAGNKVGIPLNDVMKAMNNFADTSLAASWDNVGLLVEP-TEPKIVSNILLTNDLTE 400
Query: 404 EVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQE 463
+V+ EA++ TDLI+ YHP IFAPLK +T WK+R+++ CL + IAV+SPH+++D+++
Sbjct: 401 DVMDEAIKLKTDLIVTYHPLIFAPLKSITTKYWKQRIIARCLENKIAVFSPHSSFDSVKG 460
Query: 464 G 464
G
Sbjct: 461 G 461
|
Source: Solenopsis invicta Species: Solenopsis invicta Genus: Solenopsis Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332019251|gb|EGI59760.1| Putative cytosolic iron-sulfur protein assembly protein Ciao1 [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/344 (63%), Positives = 257/344 (74%), Gaps = 36/344 (10%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
Q+L GH+GRVWNV W+P+G + SCGEDK I +W GL
Sbjct: 60 QSLTGHRGRVWNVCWHPKGANLGSCGEDKTIIIW------------GLE----------- 96
Query: 65 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 124
G K+ K IL++GH RTIRE AWSPCGN+IASASFDAT AVWDK+SGQF
Sbjct: 97 -----------GPKWVTKMILTEGHSRTIRELAWSPCGNYIASASFDATIAVWDKKSGQF 145
Query: 125 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 184
ECN TLEGHENEVKSV+WS +GQ LATCSRDKSVWVWEV +DEYEC AVINAH QDVKK
Sbjct: 146 ECNVTLEGHENEVKSVSWSISGQLLATCSRDKSVWVWEV-NDDEYECDAVINAHTQDVKK 204
Query: 185 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244
VR+HP + ILASASYD+TVK+FKE+ A++DW ATL SHTSTVWSL++D+IG+R+ATCS
Sbjct: 205 VRWHPHEEILASASYDNTVKIFKENAADSDWSCTATLSSHTSTVWSLSWDKIGNRIATCS 264
Query: 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 304
DD TVKIW+EYKPGN GI TP+N+SVWKC+CTLSG+H RTIYDI WC +T L+ TACGD
Sbjct: 265 DDKTVKIWREYKPGNDMGIVTPNNESVWKCICTLSGYHTRTIYDIDWCKITGLLVTACGD 324
Query: 305 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP 348
D IRIFKE+ + D SF ++ + + AH QDVNCV WNP +P
Sbjct: 325 DIIRIFKEDSDC-DPHQPSFTMICSINSAHAQDVNCVQWNPTIP 367
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307197840|gb|EFN78951.1| Protein CIAO1 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/344 (62%), Positives = 253/344 (73%), Gaps = 36/344 (10%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
Q+L GH+GRVWNV W+P+ ++SCGEDK I +W L GL
Sbjct: 8 QSLSGHRGRVWNVCWHPKDANLASCGEDKTIIIW---------GLEGL------------ 46
Query: 65 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 124
K+ K IL++GH RTIRE WSPCGN+IASASFDATTAVWDK+SGQF
Sbjct: 47 -------------KWVTKMILTEGHSRTIRELTWSPCGNYIASASFDATTAVWDKKSGQF 93
Query: 125 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 184
ECNATLEGHENEVKSV+WS +GQ LATCSRDKSVWVWE+ +DEYECAAVINAH+QDVKK
Sbjct: 94 ECNATLEGHENEVKSVSWSASGQLLATCSRDKSVWVWEIN-DDEYECAAVINAHLQDVKK 152
Query: 185 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244
VR+HP + ILASASYD+T ++FKED A+ DW ATL SHTSTVWSLA+D+ G R+ATCS
Sbjct: 153 VRWHPHEEILASASYDNTARMFKEDAADNDWTCIATLSSHTSTVWSLAWDKSGERIATCS 212
Query: 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 304
DD TVKIW+EYKPGN G+ TP+++ VWKCVCTLSG+H RTIYDI WC + L+ TACGD
Sbjct: 213 DDKTVKIWREYKPGNETGVATPNDEPVWKCVCTLSGYHTRTIYDIDWCKTSGLLVTACGD 272
Query: 305 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP 348
D IR+FKE+ E D SF +V + AH+QDVNCV WNP P
Sbjct: 273 DIIRVFKED-EDCDPHQPSFAMVCSVESAHSQDVNCVQWNPAAP 315
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383862289|ref|XP_003706616.1| PREDICTED: probable cytosolic iron-sulfur protein assembly protein Ciao1-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/344 (62%), Positives = 258/344 (75%), Gaps = 36/344 (10%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
QTL GH+GRVWNV W+P+GT ++SCGEDK I +W +EP
Sbjct: 30 QTLNGHRGRVWNVCWHPKGTCLASCGEDKTIIIWGP--QEP------------------- 68
Query: 65 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 124
K+ + IL++GH RTIRE AWSPCGN+IASASFDATTA+WDK+SGQF
Sbjct: 69 -------------KWVIRTILTEGHSRTIREIAWSPCGNYIASASFDATTAIWDKKSGQF 115
Query: 125 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 184
ECNATLEGHENEVKSV+WS +GQ LATCSRDKSVW+WEV +DEYECAAVINAH QDVKK
Sbjct: 116 ECNATLEGHENEVKSVSWSCSGQLLATCSRDKSVWIWEVN-DDEYECAAVINAHTQDVKK 174
Query: 185 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244
VR+HP + I+ASASYD+TVK+FKED A+ DW ATL SHTSTVWSLA+D+ G+R+ATCS
Sbjct: 175 VRWHPNEEIVASASYDNTVKIFKEDAADNDWSCIATLSSHTSTVWSLAWDKAGNRIATCS 234
Query: 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 304
DD TVKIW+E+K GN GI T +N+SVWKCVCT+SG+H RTIYDI WC T L+ TACGD
Sbjct: 235 DDQTVKIWQEFKSGNEPGIVTVNNESVWKCVCTISGYHTRTIYDIDWCKTTGLLVTACGD 294
Query: 305 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP 348
D IRIFKE+ ++ D + +F +V + AH QDVNCV WNP VP
Sbjct: 295 DIIRIFKEDSDS-DPNQPTFTMVCSMDIAHMQDVNCVQWNPTVP 337
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|156545541|ref|XP_001604508.1| PREDICTED: probable cytosolic iron-sulfur protein assembly protein Ciao1-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/344 (61%), Positives = 253/344 (73%), Gaps = 36/344 (10%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
Q+L GH+GRVWNV W+P G I+SCGEDK IR+W + D
Sbjct: 8 QSLVGHKGRVWNVCWHPSGESIASCGEDKTIRIW-----------------------MHD 44
Query: 65 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 124
K +K+ K IL++GH RTIRE +WSPCGN+IASASFDAT A+WD++SGQF
Sbjct: 45 K-----------SKWIIKTILTEGHTRTIREVSWSPCGNYIASASFDATVAIWDQKSGQF 93
Query: 125 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 184
ECN TLEGHENEVKSV+WS +GQ LATCSRDKSVWVWE+ +DEYECAAVINAH QDVKK
Sbjct: 94 ECNTTLEGHENEVKSVSWSVSGQLLATCSRDKSVWVWEI-TDDEYECAAVINAHTQDVKK 152
Query: 185 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244
VR+HP +ILASASYDDTVK+FKED A +DWI +TL SHTSTVWSL+F+ G RL TCS
Sbjct: 153 VRWHPEKDILASASYDDTVKIFKEDTASSDWICVSTLASHTSTVWSLSFNNRGDRLVTCS 212
Query: 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 304
DD ++KIW++Y+PGN GIPTPD++ VWKCVCTLSG+H RT+YD+ WC T LI TACGD
Sbjct: 213 DDKSLKIWQQYEPGNEMGIPTPDDEPVWKCVCTLSGYHSRTVYDVDWCKRTGLIVTACGD 272
Query: 305 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP 348
D IR+F+E ++ D +F LV + AH QDVNC WNP VP
Sbjct: 273 DIIRVFREESDS-DKHQPTFSLVCSMENAHTQDVNCSQWNPSVP 315
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307187516|gb|EFN72567.1| Protein CIAO1 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/344 (61%), Positives = 252/344 (73%), Gaps = 35/344 (10%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
Q+L GH+GRVW+V W+P+ ++SCGEDK I +W L GL
Sbjct: 8 QSLTGHRGRVWSVCWHPKNAYLASCGEDKKIIIW---------GLEGL------------ 46
Query: 65 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 124
K+ K IL++GH RTIRE AWS CG +IASASFDATTA+WDK GQF
Sbjct: 47 -------------KWVTKMILTEGHSRTIRELAWSLCGRYIASASFDATTAIWDKNEGQF 93
Query: 125 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 184
ECNATLEGHENEVKSV+WS +G LATCSRDKSVWVWEV DE+ECAAVINAH QDVKK
Sbjct: 94 ECNATLEGHENEVKSVSWSSSGDLLATCSRDKSVWVWEVNGVDEFECAAVINAHTQDVKK 153
Query: 185 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244
VR+HP + ILASASYD+TVK+FKED A++DW+ ATL SHTSTVWSL++D+IG+R+ATCS
Sbjct: 154 VRWHPNEEILASASYDNTVKIFKEDPADSDWMCVATLSSHTSTVWSLSWDKIGNRIATCS 213
Query: 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 304
DD TVKIW+EYK GN GIPTP+N+ VWKC+CTLSG+H RTIYDI WC T L+ TACGD
Sbjct: 214 DDKTVKIWREYKCGNETGIPTPNNEPVWKCICTLSGYHTRTIYDIDWCKTTGLLVTACGD 273
Query: 305 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP 348
D IRIFKE+ + D SF ++ + AH QDVNCV WNP VP
Sbjct: 274 DIIRIFKEDSDC-DPHQPSFTMICSMDNAHAQDVNCVQWNPTVP 316
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380019245|ref|XP_003693521.1| PREDICTED: probable cytosolic iron-sulfur protein assembly protein Ciao1-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/344 (61%), Positives = 256/344 (74%), Gaps = 36/344 (10%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
QTL GH+GRVWN+ W+P+G+ ++SCGEDK I +W ++P
Sbjct: 8 QTLSGHRGRVWNICWHPKGSYLASCGEDKTIIIWGP--QDP------------------- 46
Query: 65 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 124
K+ K IL +GH RTIRE AWSPCGN+IASASFDATTA+WDK++GQF
Sbjct: 47 -------------KWVVKTILIEGHTRTIREVAWSPCGNYIASASFDATTAIWDKKTGQF 93
Query: 125 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 184
ECNATLEGHENEVKSV+WS +G LATCSRDKSVW+WEV +DEYECAAVINAH QDVKK
Sbjct: 94 ECNATLEGHENEVKSVSWSCSGHLLATCSRDKSVWIWEV-NDDEYECAAVINAHTQDVKK 152
Query: 185 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244
VR+HP + I+ASASYD+TVK+FKED + DW ATL SHTSTVWSLA+D+ G+R+ATCS
Sbjct: 153 VRWHPNEEIVASASYDNTVKIFKEDIVDNDWSCVATLSSHTSTVWSLAWDKQGNRIATCS 212
Query: 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 304
DD TVKIW+EYKPGN GI T +N+SVWKCVCT++G+H RTIYDI WC +T L+ TACGD
Sbjct: 213 DDQTVKIWQEYKPGNEPGIITTNNESVWKCVCTITGYHTRTIYDIDWCKITGLLVTACGD 272
Query: 305 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP 348
D IRIFKE+ ++ D +F +V + AH QDVN V WNP+VP
Sbjct: 273 DIIRIFKEDSDS-DPHQPTFTMVCSMDTAHTQDVNSVQWNPIVP 315
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157132872|ref|XP_001662680.1| wd-repeat protein [Aedes aegypti] gi|122106727|sp|Q17GR9.1|CIAO1_AEDAE RecName: Full=Probable cytosolic iron-sulfur protein assembly protein Ciao1 gi|108881643|gb|EAT45868.1| AAEL002912-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/343 (58%), Positives = 251/343 (73%), Gaps = 35/343 (10%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
Q L GH+GR W W+P+G ++++CGEDK IR+W
Sbjct: 8 QCLTGHRGRAWGAGWHPKGNVLATCGEDKTIRIWA------------------------- 42
Query: 65 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 124
E ++ AK +LSDGH RTIR+ AWSPCG ++ASASFDAT A+WDK+SG+F
Sbjct: 43 --------EDASQRWVAKTVLSDGHSRTIRDVAWSPCGQYLASASFDATVAIWDKKSGEF 94
Query: 125 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 184
ECNATLEGHENEVKSV+WSK+G LATCSRDKSVWVWEV +EDEYECAAV+N H QDVKK
Sbjct: 95 ECNATLEGHENEVKSVSWSKSGSLLATCSRDKSVWVWEVAQEDEYECAAVLNTHTQDVKK 154
Query: 185 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244
V +HP ++ILASASYD+T+KL+KED A++DW +F TL SH STVWS++FD G+RLA+CS
Sbjct: 155 VEWHPHEDILASASYDNTIKLYKEDLADSDWSSFDTLVSHESTVWSISFDGSGNRLASCS 214
Query: 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 304
DD TVKIW+EYKPGN G+ PDN VWKCVCTL+G+H R++YDISWC + L+ATACGD
Sbjct: 215 DDQTVKIWQEYKPGNEFGVSCPDNTPVWKCVCTLAGYHSRSVYDISWCKQSGLLATACGD 274
Query: 305 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347
D +RIFKE E +F++V ++H AH+QDVN V WNP V
Sbjct: 275 DMVRIFKE-VEGSSPHEPTFEMVGSKH-AHSQDVNTVEWNPTV 315
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|357623147|gb|EHJ74412.1| hypothetical protein KGM_22505 [Danaus plexippus] | Back alignment and taxonomy information |
|---|
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/341 (61%), Positives = 245/341 (71%), Gaps = 35/341 (10%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
Q L GH+G VWNVSW+P G M SSCGEDK I
Sbjct: 8 QNLIGHKGIVWNVSWHPLGNMFSSCGEDKII----------------------------- 38
Query: 65 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 124
+LW KE G+K+ K +L DGHQRTIRE AWSPCGNF+ASASFD TTA+WDK+SGQF
Sbjct: 39 ---KLWSKE--GDKWVTKTVLVDGHQRTIREVAWSPCGNFLASASFDGTTAIWDKKSGQF 93
Query: 125 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 184
ECNATLEGHENEVKSV+WS +G LATC RDKSVWVWEV +DEY C AV+N+H QDVKK
Sbjct: 94 ECNATLEGHENEVKSVSWSPSGNLLATCGRDKSVWVWEVAGDDEYVCEAVLNSHNQDVKK 153
Query: 185 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244
V +HP +ILAS+SYD+TVK++KED+ ++DW ATL+SH STVWSLAFD+ G RLATCS
Sbjct: 154 VVWHPTSDILASSSYDNTVKIYKEDQLDSDWTCIATLQSHDSTVWSLAFDKTGKRLATCS 213
Query: 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 304
DD TVKIW+ Y P N G+ D+ WKCVCTLSG+H R IYDISWCH T L+ TACGD
Sbjct: 214 DDKTVKIWQSYGPDNQEGVIVDGEDATWKCVCTLSGYHTRCIYDISWCHTTGLLVTACGD 273
Query: 305 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 345
D +RIFKE E D + SFDL+ T+ AH+QDVNCV WNP
Sbjct: 274 DILRIFKE-AEDSDPNAPSFDLICTKLNAHSQDVNCVQWNP 313
|
Source: Danaus plexippus Species: Danaus plexippus Genus: Danaus Family: Nymphalidae Order: Lepidoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328790407|ref|XP_395314.4| PREDICTED: probable cytosolic iron-sulfur protein assembly protein Ciao1 [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/344 (60%), Positives = 255/344 (74%), Gaps = 36/344 (10%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
QTL GH+GRVWN+ W+P+G+ ++SCGEDK I +W ++P
Sbjct: 8 QTLNGHRGRVWNICWHPKGSYLASCGEDKTIIIWGP--QDP------------------- 46
Query: 65 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 124
K+ K IL +GH RTIRE AWSPCGN+IASASFDATTA+WDK++GQF
Sbjct: 47 -------------KWVVKTILIEGHTRTIREVAWSPCGNYIASASFDATTAIWDKKTGQF 93
Query: 125 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 184
ECNATLEGHENEVKSV+WS +G LATCSRDKSVW+WEV +DEYECAAVINAH QDVKK
Sbjct: 94 ECNATLEGHENEVKSVSWSCSGHLLATCSRDKSVWIWEVN-DDEYECAAVINAHTQDVKK 152
Query: 185 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244
VR+HP + ++ASASYD+TVK+FKED + DW ATL SHTSTVWSLA+D+ +R+ATCS
Sbjct: 153 VRWHPNEEVVASASYDNTVKIFKEDIMDNDWSCVATLSSHTSTVWSLAWDKQSNRIATCS 212
Query: 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 304
DD TVKIW+EYKPGN GI T +N+SVWKCVCT++G+H RTIYDI WC +T L+ TACGD
Sbjct: 213 DDQTVKIWQEYKPGNEPGIMTTNNESVWKCVCTITGYHTRTIYDIDWCKITGLLVTACGD 272
Query: 305 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP 348
D IRIFKE+ ++ D +F +V + AH QDVN V WNP++P
Sbjct: 273 DIIRIFKEDSDS-DPHQPTFTMVCSMDTAHTQDVNSVQWNPIIP 315
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 479 | ||||||
| UNIPROTKB|Q17GR9 | 337 | Ciao1 "Probable cytosolic iron | 0.588 | 0.836 | 0.663 | 1.3e-109 | |
| UNIPROTKB|B0XAF3 | 338 | Ciao1 "Probable cytosolic iron | 0.607 | 0.860 | 0.636 | 2.5e-106 | |
| UNIPROTKB|B4MY77 | 335 | Ciao1 "Probable cytosolic iron | 0.588 | 0.841 | 0.656 | 2.8e-105 | |
| UNIPROTKB|B4GDM7 | 335 | Ciao1 "Probable cytosolic iron | 0.588 | 0.841 | 0.656 | 4.6e-105 | |
| UNIPROTKB|Q292E8 | 335 | Ciao1 "Probable cytosolic iron | 0.588 | 0.841 | 0.656 | 4.6e-105 | |
| UNIPROTKB|B3MC74 | 335 | Ciao1 "Probable cytosolic iron | 0.588 | 0.841 | 0.645 | 5.8e-105 | |
| UNIPROTKB|B3NQR5 | 335 | Ciao1 "Probable cytosolic iron | 0.588 | 0.841 | 0.645 | 1.2e-104 | |
| UNIPROTKB|B4P7Q3 | 335 | Ciao1 "Probable cytosolic iron | 0.588 | 0.841 | 0.649 | 1.2e-104 | |
| FB|FBgn0033972 | 335 | Ciao1 "Ciao1" [Drosophila mela | 0.588 | 0.841 | 0.645 | 2e-104 | |
| UNIPROTKB|B4QFZ8 | 335 | Ciao1 "Probable cytosolic iron | 0.588 | 0.841 | 0.642 | 4.1e-104 |
| UNIPROTKB|Q17GR9 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Aedes aegypti (taxid:7159)] | Back alignment and assigned GO terms |
|---|
Score = 1083 (386.3 bits), Expect = 1.3e-109, P = 1.3e-109
Identities = 189/285 (66%), Positives = 234/285 (82%)
Query: 63 EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 122
EDK IR+W +++ ++ AK +LSDGH RTIR+ AWSPCG ++ASASFDAT A+WDK+SG
Sbjct: 34 EDKTIRIWAEDA-SQRWVAKTVLSDGHSRTIRDVAWSPCGQYLASASFDATVAIWDKKSG 92
Query: 123 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 182
+FECNATLEGHENEVKSV+WSK+G LATCSRDKSVWVWEV +EDEYECAAV+N H QDV
Sbjct: 93 EFECNATLEGHENEVKSVSWSKSGSLLATCSRDKSVWVWEVAQEDEYECAAVLNTHTQDV 152
Query: 183 KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242
KKV +HP ++ILASASYD+T+KL+KED A++DW +F TL SH STVWS++FD G+RLA+
Sbjct: 153 KKVEWHPHEDILASASYDNTIKLYKEDLADSDWSSFDTLVSHESTVWSISFDGSGNRLAS 212
Query: 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302
CSDD TVKIW+EYKPGN G+ PDN VWKCVCTL+G+H R++YDISWC + L+ATAC
Sbjct: 213 CSDDQTVKIWQEYKPGNEFGVSCPDNTPVWKCVCTLAGYHSRSVYDISWCKQSGLLATAC 272
Query: 303 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347
GDD +RIFKE E +F++V ++H AH+QDVN V WNP V
Sbjct: 273 GDDMVRIFKE-VEGSSPHEPTFEMVGSKH-AHSQDVNTVEWNPTV 315
|
|
| UNIPROTKB|B0XAF3 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Culex quinquefasciatus (taxid:7176)] | Back alignment and assigned GO terms |
|---|
Score = 1052 (375.4 bits), Expect = 2.5e-106, P = 2.5e-106
Identities = 189/297 (63%), Positives = 235/297 (79%)
Query: 53 PVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA 112
P + L EDK IR+W + G ++ K +LSDGH RTIR+ AWSPCG F+ASASFDA
Sbjct: 24 PRDPVLATCGEDKTIRIWADDGTG-RWVPKTVLSDGHTRTIRDVAWSPCGRFLASASFDA 82
Query: 113 TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA 172
T A+WD+RSG+FECNATLEGHENEVKSV+WSK+G LATCSRDKSVW+WEV +EDEYECA
Sbjct: 83 TVAIWDRRSGEFECNATLEGHENEVKSVSWSKSGALLATCSRDKSVWIWEVAQEDEYECA 142
Query: 173 AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLA 232
AV+N H QDVKKV +HP +++LASASYD+T++L++ED A++DW +F TL SH STVWS+A
Sbjct: 143 AVLNTHSQDVKKVEWHPNEDVLASASYDNTIQLYREDLADSDWSSFDTLASHDSTVWSIA 202
Query: 233 FDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDS-VWKCVCTLSGHHGRTIYDISW 291
FD GSRLA+CSDD TV+IW+EYKPGN G+ PD + VWKCVCTLSG H R +YDISW
Sbjct: 203 FDASGSRLASCSDDQTVRIWQEYKPGNEFGVACPDGKTPVWKCVCTLSGFHSRAVYDISW 262
Query: 292 CHLTDLIATACGDDAIRIFKENPEAGD-SDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347
C T LIATACGDD +RIF+E AG ++ +F++V ++H AH+QD N V W+P V
Sbjct: 263 CKKTGLIATACGDDMVRIFRE--VAGSPANEPTFEMVASKH-AHSQDANTVEWSPTV 316
|
|
| UNIPROTKB|B4MY77 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Drosophila willistoni (taxid:7260)] | Back alignment and assigned GO terms |
|---|
Score = 1042 (371.9 bits), Expect = 2.8e-105, P = 2.8e-105
Identities = 187/285 (65%), Positives = 221/285 (77%)
Query: 63 EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 122
EDK IR+W GN ++ K ILSDGH+RTIRE WSPCG ++ASASFDATTA+W K SG
Sbjct: 34 EDKAIRIWSLS--GNSWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSG 91
Query: 123 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 182
+FECNATLEGHENEVKSV+WSK+G LATCSRDKSVW+WEV +DE+ECAAV+N H QDV
Sbjct: 92 EFECNATLEGHENEVKSVSWSKSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDV 151
Query: 183 KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242
K+V +HP ILASASYD+T+K+F E ++DW ATL SHTSTVWS+ FD G RL +
Sbjct: 152 KRVVWHPTKEILASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSIDFDADGERLVS 211
Query: 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302
CSDD T+KIW+ Y PGN AG+ TPD +VWKCVCTLSG H R IYD+SWC LT LIATAC
Sbjct: 212 CSDDTTLKIWRAYHPGNDAGVATPDKQTVWKCVCTLSGQHSRAIYDVSWCKLTGLIATAC 271
Query: 303 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347
GDD IRIFKE+ ++ D +F+ V E AH QDVN V WNPV+
Sbjct: 272 GDDGIRIFKESSDS-KRDEPTFEQVTAEESAHEQDVNSVEWNPVM 315
|
|
| UNIPROTKB|B4GDM7 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Drosophila persimilis (taxid:7234)] | Back alignment and assigned GO terms |
|---|
Score = 1040 (371.2 bits), Expect = 4.6e-105, P = 4.6e-105
Identities = 187/285 (65%), Positives = 221/285 (77%)
Query: 63 EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 122
EDK IR+W GN ++ K ILSDGH+RTIRE WSPCG ++ASASFDATTA+W K SG
Sbjct: 34 EDKAIRVWSLS--GNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSG 91
Query: 123 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 182
+FECNATLEGHENEVKSV+WS++G LATCSRDKSVW+WEV +DE+ECAAV+NAH QDV
Sbjct: 92 EFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDV 151
Query: 183 KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242
K+V +HP +ILASASYD+T+K+F E + ++DW ATL SHTSTVWS+ FD G RL +
Sbjct: 152 KRVVWHPTKDILASASYDNTIKMFAESQLDSDWDCTATLSSHTSTVWSIDFDAEGDRLVS 211
Query: 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302
CSDD T+KIW+ Y PGN AGI TPD SVWKCVCTLSG H R IYD+SWC LT LIAT C
Sbjct: 212 CSDDKTLKIWRAYHPGNDAGIATPDKQSVWKCVCTLSGQHSRAIYDVSWCKLTGLIATGC 271
Query: 303 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347
GDD IRIFKE ++ D +F+ + E AH QDVN V WNP V
Sbjct: 272 GDDGIRIFKETSDS-KRDEPTFEQLTAEETAHEQDVNAVEWNPAV 315
|
|
| UNIPROTKB|Q292E8 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Drosophila pseudoobscura pseudoobscura (taxid:46245)] | Back alignment and assigned GO terms |
|---|
Score = 1040 (371.2 bits), Expect = 4.6e-105, P = 4.6e-105
Identities = 187/285 (65%), Positives = 221/285 (77%)
Query: 63 EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 122
EDK IR+W GN ++ K ILSDGH+RTIRE WSPCG ++ASASFDATTA+W K SG
Sbjct: 34 EDKAIRVWSLS--GNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSG 91
Query: 123 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 182
+FECNATLEGHENEVKSV+WS++G LATCSRDKSVW+WEV +DE+ECAAV+NAH QDV
Sbjct: 92 EFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDV 151
Query: 183 KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242
K+V +HP +ILASASYD+T+K+F E + ++DW ATL SHTSTVWS+ FD G RL +
Sbjct: 152 KRVVWHPTKDILASASYDNTIKMFAESQLDSDWDCTATLSSHTSTVWSIDFDAEGDRLVS 211
Query: 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302
CSDD T+KIW+ Y PGN AGI TPD SVWKCVCTLSG H R IYD+SWC LT LIAT C
Sbjct: 212 CSDDKTLKIWRAYHPGNDAGIATPDKQSVWKCVCTLSGQHSRAIYDVSWCKLTGLIATGC 271
Query: 303 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347
GDD IRIFKE ++ D +F+ + E AH QDVN V WNP V
Sbjct: 272 GDDGIRIFKETSDS-KRDEPTFEQLTAEETAHEQDVNAVEWNPAV 315
|
|
| UNIPROTKB|B3MC74 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Drosophila ananassae (taxid:7217)] | Back alignment and assigned GO terms |
|---|
Score = 1039 (370.8 bits), Expect = 5.8e-105, P = 5.8e-105
Identities = 184/285 (64%), Positives = 222/285 (77%)
Query: 63 EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 122
EDK IR+W GN +T K ILSDGH+RTIRE WSPCG ++ASASFD TTA+W K SG
Sbjct: 34 EDKAIRIWSLN--GNTWTTKTILSDGHKRTIREIRWSPCGQYLASASFDGTTAIWSKSSG 91
Query: 123 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 182
+FECNATLEGHENEVKSV+WS++G LATCSRDKSVW+WEV +DE+ECAAV+N H QDV
Sbjct: 92 EFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDV 151
Query: 183 KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242
K+V +HP +LASASYD+T+K+F ED ++DW ATL SHTSTVWS+ FD G RL +
Sbjct: 152 KRVVWHPTKELLASASYDNTIKMFAEDALDSDWDCVATLSSHTSTVWSIDFDATGERLVS 211
Query: 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302
CSDD ++KIW+ Y PGN AG+ TPD +VWKCVCT+SG H R IYD+SWC LT+LIATAC
Sbjct: 212 CSDDTSLKIWQAYHPGNDAGVATPDKQTVWKCVCTISGQHSRAIYDVSWCKLTNLIATAC 271
Query: 303 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347
GDD IRIFKE ++ D +F+ + E AH+QDVN V WNPVV
Sbjct: 272 GDDGIRIFKETSDS-KRDEPTFEQLTAEEGAHDQDVNSVEWNPVV 315
|
|
| UNIPROTKB|B3NQR5 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Drosophila erecta (taxid:7220)] | Back alignment and assigned GO terms |
|---|
Score = 1036 (369.7 bits), Expect = 1.2e-104, P = 1.2e-104
Identities = 184/285 (64%), Positives = 222/285 (77%)
Query: 63 EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 122
EDK IR+W G+ ++ K ILSDGH+RTIRE WSPCG ++ASASFDATTA+W K SG
Sbjct: 34 EDKAIRIWSLT--GSTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSG 91
Query: 123 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 182
+FECNATLEGHENEVKSV+WS++G LATCSRDKSVW+WEV +DE+ECAAV+N+H QDV
Sbjct: 92 EFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDV 151
Query: 183 KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242
K+V +HP +LASASYD+T+K++ ED + DW ATL SHTST+W + FD G RL +
Sbjct: 152 KRVVWHPTKEVLASASYDNTIKMYAEDPVDNDWDCTATLTSHTSTIWGIDFDADGERLVS 211
Query: 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302
CSDD T+KIWK Y PGNSAG+ TPD +VWKCVCTLSG H R IYD+SWC LT LIATAC
Sbjct: 212 CSDDTTIKIWKAYHPGNSAGVATPDQQTVWKCVCTLSGQHSRAIYDVSWCKLTGLIATAC 271
Query: 303 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347
GDD IRIFKE ++ D +F+ + E AH+QDVN V WNPVV
Sbjct: 272 GDDGIRIFKETSDS-KPDEPTFEQLTAEEGAHDQDVNSVQWNPVV 315
|
|
| UNIPROTKB|B4P7Q3 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Drosophila yakuba (taxid:7245)] | Back alignment and assigned GO terms |
|---|
Score = 1036 (369.7 bits), Expect = 1.2e-104, P = 1.2e-104
Identities = 185/285 (64%), Positives = 222/285 (77%)
Query: 63 EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 122
EDK IR+W GN ++ K ILSDGH+RTIRE WSPCG ++ASASFDATTA+W K SG
Sbjct: 34 EDKAIRIWSLT--GNTWSTKTILSDGHKRTIREIQWSPCGQYLASASFDATTAIWSKSSG 91
Query: 123 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 182
+FECNATLEGHENEVKSV+WS++G LATCSRDKSVW+WEV +DE+ECAAV+N+H QDV
Sbjct: 92 EFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDV 151
Query: 183 KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242
K+V +HP ILASASYD+T+K++ E+ + DW ATL SHTST+W + FD G RL +
Sbjct: 152 KRVVWHPTKEILASASYDNTIKMYAEEPIDNDWDCTATLTSHTSTIWGIDFDADGERLVS 211
Query: 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302
CSDD TVKIW+ Y PGNSAG+ TPD +VWKCVCTLSG H R IYD+SWC LT LIATAC
Sbjct: 212 CSDDTTVKIWRAYHPGNSAGVATPDQQTVWKCVCTLSGQHSRAIYDVSWCKLTGLIATAC 271
Query: 303 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347
GDD IRIFKE ++ D +F+ + E AH+QDVN V WNPVV
Sbjct: 272 GDDGIRIFKETSDS-KPDEPTFEQLTAEESAHDQDVNSVQWNPVV 315
|
|
| FB|FBgn0033972 Ciao1 "Ciao1" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1034 (369.0 bits), Expect = 2.0e-104, P = 2.0e-104
Identities = 184/285 (64%), Positives = 223/285 (78%)
Query: 63 EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 122
EDK IR+W GN ++ K ILSDGH+RTIRE WSPCG ++ASASFDATTA+W K SG
Sbjct: 34 EDKAIRIWSLT--GNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSG 91
Query: 123 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 182
+FECNATLEGHENEVKSV+WS++G LATCSRDKSVW+WEV +DE+ECAAV+N H QDV
Sbjct: 92 EFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDV 151
Query: 183 KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242
K+V +HP +ILASASYD+T+K+F E+ + DW ATL SHTSTVW + FD G RL +
Sbjct: 152 KRVVWHPTKDILASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFDADGERLVS 211
Query: 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302
CSDD T+KIW+ Y PGN+AG+ TPD +VWKCVCT+SG H R IYD+SWC LT LIATAC
Sbjct: 212 CSDDTTIKIWRAYHPGNTAGVATPDQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIATAC 271
Query: 303 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347
GDD IRIFKE+ ++ D +F+ + E AH+QDVN V WNPVV
Sbjct: 272 GDDGIRIFKESSDS-KPDEPTFEQITAEEGAHDQDVNSVQWNPVV 315
|
|
| UNIPROTKB|B4QFZ8 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Drosophila simulans (taxid:7240)] | Back alignment and assigned GO terms |
|---|
Score = 1031 (368.0 bits), Expect = 4.1e-104, P = 4.1e-104
Identities = 183/285 (64%), Positives = 222/285 (77%)
Query: 63 EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 122
EDK IR+W GN ++ K ILSDGH+RTIRE WSPCG ++ASASFDATTA+W K SG
Sbjct: 34 EDKAIRIWSLT--GNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSG 91
Query: 123 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 182
+FECNATLEGHENEVKSV+WS++G LATCSRDKSVW+WEV +DE+ECAAV+N H QDV
Sbjct: 92 EFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDV 151
Query: 183 KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242
K+V +HP ++LASASYD+T+K+F E+ + DW ATL SHTSTVW + FD G RL +
Sbjct: 152 KRVVWHPTKDVLASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFDADGERLVS 211
Query: 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302
CSDD T+KIWK Y PGN+AG+ TP+ +VWKCVCT+SG H R IYD+SWC LT LIATAC
Sbjct: 212 CSDDTTIKIWKAYHPGNTAGVATPEQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIATAC 271
Query: 303 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347
GDD IRIFKE ++ D +F+ + E AH+QDVN V WNPVV
Sbjct: 272 GDDGIRIFKETSDS-KPDEPTFEQITAEEGAHDQDVNSVQWNPVV 315
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q7PS24 | CIAO1_ANOGA | No assigned EC number | 0.5402 | 0.6450 | 0.9061 | yes | N/A |
| Q5M7T1 | CIAO1_RAT | No assigned EC number | 0.5555 | 0.6179 | 0.8731 | yes | N/A |
| Q292E8 | CIAO1_DROPS | No assigned EC number | 0.5804 | 0.6534 | 0.9343 | yes | N/A |
| Q7K1Y4 | CIAO1_DROME | No assigned EC number | 0.5734 | 0.6513 | 0.9313 | yes | N/A |
| Q99KN2 | CIAO1_MOUSE | No assigned EC number | 0.5476 | 0.6242 | 0.8820 | yes | N/A |
| Q55DA2 | CIAO1_DICDI | No assigned EC number | 0.3458 | 0.6158 | 0.8858 | yes | N/A |
| O76071 | CIAO1_HUMAN | No assigned EC number | 0.5625 | 0.6242 | 0.8820 | yes | N/A |
| B9WHJ2 | CIAO1_CANDC | No assigned EC number | 0.3222 | 0.6242 | 0.7868 | yes | N/A |
| Q9XW12 | CIAO1_CAEEL | No assigned EC number | 0.3399 | 0.6430 | 0.9139 | yes | N/A |
| A3LVM1 | CIAO1_PICST | No assigned EC number | 0.3013 | 0.6179 | 0.8199 | yes | N/A |
| Q6CBI8 | CIAO1_YARLI | No assigned EC number | 0.3682 | 0.6158 | 0.8885 | yes | N/A |
| Q28DW0 | CIAO1_XENTR | No assigned EC number | 0.5327 | 0.6158 | 0.8858 | yes | N/A |
| Q6P0D9 | CIAO1_DANRE | No assigned EC number | 0.5345 | 0.6054 | 0.8787 | yes | N/A |
| Q32PJ6 | CIAO1_BOVIN | No assigned EC number | 0.5391 | 0.6430 | 0.9085 | yes | N/A |
| Q6FJ73 | CIAO1_CANGA | No assigned EC number | 0.3314 | 0.6137 | 0.8724 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 479 | |||
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 8e-56 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 3e-44 | |
| pfam01784 | 237 | pfam01784, NIF3, NIF3 (NGG1p interacting factor 3) | 3e-39 | |
| COG0327 | 250 | COG0327, COG0327, Uncharacterized conserved protei | 7e-30 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 1e-27 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 8e-27 | |
| TIGR00486 | 249 | TIGR00486, YbgI_SA1388, dinuclear metal center pro | 1e-24 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 5e-24 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 1e-14 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 5e-09 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 1e-08 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 4e-08 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 1e-07 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 2e-07 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 4e-07 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 5e-07 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 7e-06 | |
| PTZ00421 | 493 | PTZ00421, PTZ00421, coronin; Provisional | 1e-05 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 2e-04 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 2e-04 | |
| PTZ00420 | 568 | PTZ00420, PTZ00420, coronin; Provisional | 4e-04 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 0.001 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 0.001 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 0.002 | |
| PTZ00420 | 568 | PTZ00420, PTZ00420, coronin; Provisional | 0.002 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 187 bits (476), Expect = 8e-56
Identities = 97/343 (28%), Positives = 153/343 (44%), Gaps = 72/343 (20%)
Query: 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLV 62
+TLKGH G V V+++P G ++++ D I++W L + +L+
Sbjct: 1 LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVW---------DLETGELLRTLK--- 48
Query: 63 EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 122
GH +R+ A S G ++AS S D T +WD +G
Sbjct: 49 -------------------------GHTGPVRDVAASADGTYLASGSSDKTIRLWDLETG 83
Query: 123 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 182
EC TL GH + V SV +S +G+ L++ SRDK++ VW+V + +C + H V
Sbjct: 84 --ECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDV---ETGKCLTTLRGHTDWV 138
Query: 183 KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242
V F P +AS+S D T+KL+ + ATL HT V S+AF G +L +
Sbjct: 139 NSVAFSPDGTFVASSSQDGTIKLWDLRTGKC----VATLTGHTGEVNSVAFSPDGEKLLS 194
Query: 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302
S D T+K+W + S KC+ TL G H + +++ L+A+
Sbjct: 195 SSSDGTIKLW---------------DLSTGKCLGTLRG-HENGVNSVAFSPDGYLLASGS 238
Query: 303 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 345
D IR++ D+ + + V T H V +AW+P
Sbjct: 239 EDGTIRVW---------DLRTGECVQT-LSGHTNSVTSLAWSP 271
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 156 bits (397), Expect = 3e-44
Identities = 78/249 (31%), Positives = 119/249 (47%), Gaps = 46/249 (18%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
+TL GH V +V+++P G ++SS DK I++W
Sbjct: 87 RTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVW-------------------------- 120
Query: 65 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 124
++ E+ T + GH + A+SP G F+AS+S D T +WD R+G
Sbjct: 121 -DV-----ETGKCLTTLR-----GHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTG-- 167
Query: 125 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 184
+C ATL GH EV SV +S +G+ L + S D ++ +W++ C + H V
Sbjct: 168 KCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGK---CLGTLRGHENGVNS 224
Query: 185 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244
V F P +LAS S D T++++ E TL HT++V SLA+ G RLA+ S
Sbjct: 225 VAFSPDGYLLASGSEDGTIRVWDLRTGECV----QTLSGHTNSVTSLAWSPDGKRLASGS 280
Query: 245 DDATVKIWK 253
D T++IW
Sbjct: 281 ADGTIRIWD 289
|
Length = 289 |
| >gnl|CDD|216697 pfam01784, NIF3, NIF3 (NGG1p interacting factor 3) | Back alignment and domain information |
|---|
Score = 141 bits (358), Expect = 3e-39
Identities = 50/106 (47%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 359 DVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLII 418
+++ LE +AP SLAE WDNVGL + +K I++ +D T+EV++EA+ENG DLII
Sbjct: 1 EIIELLEELAPPSLAEDWDNVGLQVGDPE--GEVKKILVALDATEEVIEEAIENGADLII 58
Query: 419 AYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQEG 464
+HP IF PLKR+T D K R + + +NI++YS HT DA G
Sbjct: 59 THHPLIFKPLKRITGDDPKGRRILKLIKNNISLYSAHTNLDAAPGG 104
|
This family contains several NIF3 (NGG1p interacting factor 3) protein homologues. NIF3 interacts with the yeast transcriptional coactivator NGG1p which is part of the ADA complex, the exact function of this interaction is unknown. Length = 237 |
| >gnl|CDD|223404 COG0327, COG0327, Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 7e-30
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 357 LHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDL 416
+ +++ LE P LAE WDN GL + +K + + +D T VL EA+E G DL
Sbjct: 3 VSELIELLEEFLPPELAEDWDNNGLQVGGPLEE--VKKVAVALDATLAVLDEAIELGADL 60
Query: 417 IIAYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQEG 464
+I +HP IF P+K + D K + + + ++I +Y+ HT DA EG
Sbjct: 61 LIVHHPLIFWPVKSLAIDGPKGKRIKALIQNDINLYAAHTNLDAHPEG 108
|
Length = 250 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 114 bits (286), Expect = 1e-27
Identities = 75/261 (28%), Positives = 118/261 (45%), Gaps = 24/261 (9%)
Query: 5 QTLKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWVM----VIREPYEKLHGLPVE--TS 57
TL GH V +++++P G +I+S D IRLW + ++R V +
Sbjct: 192 STLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSP 251
Query: 58 LRQLV----EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDAT 113
L+ D IRLW S + GH ++ A+SP G +AS S D T
Sbjct: 252 DGSLLASGSSDGTIRLWDLRSSSSLLR----TLSGHSSSVLSVAFSPDGKLLASGSSDGT 307
Query: 114 TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT-CSRDKSVWVWEVGEEDEYECA 172
+WD +G+ + TL+GHE V S+++S +G L + S D ++ +W++ +
Sbjct: 308 VRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKT- 366
Query: 173 AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLA 232
+V V F P +++S S D TV+L+ L HTS V SL
Sbjct: 367 ---LEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGS----LLRNLDGHTSRVTSLD 419
Query: 233 FDRIGSRLATCSDDATVKIWK 253
F G LA+ S D T+++W
Sbjct: 420 FSPDGKSLASGSSDNTIRLWD 440
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 112 bits (280), Expect = 8e-27
Identities = 92/390 (23%), Positives = 158/390 (40%), Gaps = 52/390 (13%)
Query: 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREP----YEKLHGLPVETS 57
++S L+GH+ + +++++P G ++ S D I+LW + E E LH V
Sbjct: 56 LSSLLLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKL 115
Query: 58 LRQLVE-----------DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA 106
+ D ++LW + G +GH ++ A+SP G +A
Sbjct: 116 ALSSPDGNSILLASSSLDGTVKLWDLSTPGKL----IRTLEGHSESVTSLAFSPDGKLLA 171
Query: 107 SAS-FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF-LATCSRDKSVWVWEVG 164
S S D T +WD R+G + +TL GH + V S+ +S +G +A+ S D ++ +W++
Sbjct: 172 SGSSLDGTIKLWDLRTG--KPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDL- 228
Query: 165 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSH 224
+ ++ H V F P ++LAS S D T++L+ + TL H
Sbjct: 229 -STGKLLRSTLSGHSDSVVSS-FSPDGSLLASGSSDGTIRLWD---LRSSSSLLRTLSGH 283
Query: 225 TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR 284
+S+V S+AF G LA+ S D TV++W TL GH
Sbjct: 284 SSSVLSVAFSPDGKLLASGSSDGTVRLWDL-------------ETGKLLSSLTLKGH-EG 329
Query: 285 TIYDISWCHLTDLIATACGDDA-IRIF--------KENPEAGDSDMVSFDLVHTEHRAHN 335
+ +S+ L+ + DD IR++ K + VSF + +
Sbjct: 330 PVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSPDGRVVSSGS 389
Query: 336 QDVNCVAWNPVVPEPQKTNLTLHDVVRRLE 365
D W+ + V L+
Sbjct: 390 TDGTVRLWDLSTGSLLRNLDGHTSRVTSLD 419
|
Length = 466 |
| >gnl|CDD|213534 TIGR00486, YbgI_SA1388, dinuclear metal center protein, YbgI/SA1388 family | Back alignment and domain information |
|---|
Score = 102 bits (255), Expect = 1e-24
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 359 DVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLII 418
++++ + P LAE DN GL + N +K +++ +D ++ V EAV G DLII
Sbjct: 5 ELIQLINRFLPKELAEDGDNNGLQVGSGNEE--VKKVVVAVDASESVADEAVRLGADLII 62
Query: 419 AYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQEG 464
+HP I+ PLKR+ R + L ++I++YS HT DA G
Sbjct: 63 THHPLIWKPLKRLIRGIKPGR-LKILLQNDISLYSAHTNLDAHDGG 107
|
The characterization of this family of uncharacterized proteins as orthologous is tentative. Members are found in all three domains of life. Several members (from Bacillus subtilis, Listeria monocytogenes, and Mycobacterium tuberculosis - all classified as Firmicutes within the Eubacteria) share a long insert relative to other members [Unknown function, General]. Length = 249 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 104 bits (259), Expect = 5e-24
Identities = 76/311 (24%), Positives = 124/311 (39%), Gaps = 47/311 (15%)
Query: 41 VIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 100
+ L L L+ D + L S +L GH+ +I A+SP
Sbjct: 25 LNSLSLLSLGSSESGILLLALLSDSLVSLPDLSS---------LLLRGHEDSITSIAFSP 75
Query: 101 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTW-SKNGQFLATC--SRDKS 157
G + S S D T +WD +G+ + H++ V + S +G + S D +
Sbjct: 76 DGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGT 135
Query: 158 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWI 216
V +W++ + + H + V + F P +LAS S D T+KL+ +
Sbjct: 136 VKLWDL--STPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGK---- 189
Query: 217 NFATLKSHTSTVWSLAFDRIGSR-LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 275
+TL HT V SLAF G +A+ S D T+++W + S K +
Sbjct: 190 PLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLW---------------DLSTGKLL 234
Query: 276 -CTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH 334
TLSGH + S+ L+A+ D IR++ D+ S + H
Sbjct: 235 RSTLSGHSDSVV--SSFSPDGSLLASGSSDGTIRLW---------DLRSSSSLLRTLSGH 283
Query: 335 NQDVNCVAWNP 345
+ V VA++P
Sbjct: 284 SSSVLSVAFSP 294
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 75.5 bits (184), Expect = 1e-14
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 42/205 (20%)
Query: 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVE 63
+TL GH V +V+++P G +++S D +RLW
Sbjct: 277 LRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLW------------------------- 311
Query: 64 DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASA-SFDATTAVWDKRSG 122
++ GH+ + ++SP G+ + S S D T +WD R+G
Sbjct: 312 ----------DLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTG 361
Query: 123 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 182
+ + V SV++S +G+ +++ S D +V +W++ ++ H V
Sbjct: 362 K---PLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDL---STGSLLRNLDGHTSRV 415
Query: 183 KKVRFHPFDNILASASYDDTVKLFK 207
+ F P LAS S D+T++L+
Sbjct: 416 TSLDFSPDGKSLASGSSDNTIRLWD 440
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 57.8 bits (138), Expect = 5e-09
Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 29/167 (17%)
Query: 2 INSQTLKGHQGRVWNVSWNPQGTMI-SSCGEDKNIRLWVMVIREPYEKLHGL-------- 52
++S TLKGH+G V ++S++P G+++ S +D IRLW + +P + L G
Sbjct: 319 LSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSF 378
Query: 53 -PVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD 111
P + D +RLW + DGH + +SP G +AS S D
Sbjct: 379 SPDGRVVSSGSTDGTVRLWDLSTGSLLRN-----LDGHTSRVTSLDFSPDGKSLASGSSD 433
Query: 112 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 158
T +WD ++ +KSV++S +G+ LA+ S D SV
Sbjct: 434 NTIRLWDLKT--------------SLKSVSFSPDGKVLASKSSDLSV 466
|
Length = 466 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 1e-08
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 123 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162
E TL+GH V SV +S +G++LA+ S D ++ +W+
Sbjct: 1 SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 4e-08
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 124 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161
+ TL+GH V SV +S +G LA+ S D +V VW
Sbjct: 1 GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVW 38
|
Length = 39 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 1e-07
Identities = 14/34 (41%), Positives = 25/34 (73%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLW 38
+TLKGH G V +V+++P G +++S +D +R+W
Sbjct: 5 RTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVW 38
|
Length = 39 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 2e-07
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLW 38
+TLKGH G V +V+++P G ++S +D I+LW
Sbjct: 6 KTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLW 39
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 4e-07
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 219 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 253
TLK HT V S+AF G+ LA+ SDD TV++W
Sbjct: 5 RTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 5e-07
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 219 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 253
TLK HT V S+AF G LA+ SDD T+K+W
Sbjct: 6 KTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 7e-06
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLW 38
QTL GH V +++W+P G ++S D IR+W
Sbjct: 254 VQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIW 288
|
Length = 289 |
| >gnl|CDD|173611 PTZ00421, PTZ00421, coronin; Provisional | Back alignment and domain information |
|---|
Score = 47.2 bits (112), Expect = 1e-05
Identities = 45/175 (25%), Positives = 69/175 (39%), Gaps = 25/175 (14%)
Query: 132 GHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEED-EYECAAVI---NAHIQDVKKVR 186
G E + V ++ + Q L T S D ++ W + EE + I H + V V
Sbjct: 73 GQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVS 132
Query: 187 FHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 245
FHP N+LASA D V ++ ++ +A +K H+ + SL ++ GS L T S
Sbjct: 133 FHPSAMNVLASAGADMVVNVWDVERGKAV----EVIKCHSDQITSLEWNLDGSLLCTTSK 188
Query: 246 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT 300
D + I P + V ++ H W DLI T
Sbjct: 189 DKKLNI---IDPRDG------------TIVSSVEAHASAKSQRCLWAKRKDLIIT 228
|
Length = 493 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 2e-04
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 170 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 207
E + H V V F P LAS S D T+KL+
Sbjct: 3 ELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 2e-04
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 170 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 207
+ + H V V F P N+LAS S D TV+++
Sbjct: 2 KLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|240412 PTZ00420, PTZ00420, coronin; Provisional | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 4e-04
Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 43/153 (28%)
Query: 7 LKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDK 65
LKGH + ++ +NP +++S ED IR+W E H D+
Sbjct: 70 LKGHTSSILDLQFNPCFSEILASGSEDLTIRVW--------EIPH------------NDE 109
Query: 66 NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI-ASASFDATTAVWD----KR 120
++ + + GH++ I W+P +I S+ FD+ +WD KR
Sbjct: 110 SV---------KEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKR 160
Query: 121 SGQFECNATLEGHENEVKSVTWSKNGQFLA-TC 152
+ F+ N ++ S+ W+ G L+ TC
Sbjct: 161 A--FQINMP-----KKLSSLKWNIKGNLLSGTC 186
|
Length = 568 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 36.1 bits (84), Expect = 0.001
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWD 118
GH + A+SP G ++AS S D T +WD
Sbjct: 9 KGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 36.2 bits (84), Expect = 0.001
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWD 118
GH + A+SP GN +AS S D T VWD
Sbjct: 8 KGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 35.8 bits (83), Expect = 0.002
Identities = 8/40 (20%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 272 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 311
+ + TL GH G + +++ +A+ D I+++
Sbjct: 2 GELLKTLKGHTGP-VTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|240412 PTZ00420, PTZ00420, coronin; Provisional | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.002
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 17/91 (18%)
Query: 221 LKSHTSTVWSLAFDRIGSR-LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV---- 275
LK HTS++ L F+ S LA+ S+D T+++W+ P ND K +
Sbjct: 70 LKGHTSSILDLQFNPCFSEILASGSEDLTIRVWE-----------IPHNDESVKEIKDPQ 118
Query: 276 CTLSGHHGRTIYDISWCHLTDLIATACGDDA 306
C L GH + I I W + I + G D+
Sbjct: 119 CILKGHK-KKISIIDWNPMNYYIMCSSGFDS 148
|
Length = 568 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 479 | |||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0645|consensus | 312 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0286|consensus | 343 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0315|consensus | 311 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0265|consensus | 338 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| KOG0273|consensus | 524 | 100.0 | ||
| KOG0295|consensus | 406 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0284|consensus | 464 | 100.0 | ||
| KOG0318|consensus | 603 | 100.0 | ||
| KOG0285|consensus | 460 | 100.0 | ||
| KOG0291|consensus | 893 | 100.0 | ||
| KOG0291|consensus | 893 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| KOG0316|consensus | 307 | 100.0 | ||
| KOG0266|consensus | 456 | 100.0 | ||
| KOG0284|consensus | 464 | 100.0 | ||
| KOG0319|consensus | 775 | 100.0 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 100.0 | |
| KOG0286|consensus | 343 | 100.0 | ||
| KOG0318|consensus | 603 | 100.0 | ||
| KOG0282|consensus | 503 | 100.0 | ||
| KOG0295|consensus | 406 | 100.0 | ||
| KOG0315|consensus | 311 | 100.0 | ||
| KOG0276|consensus | 794 | 100.0 | ||
| KOG0645|consensus | 312 | 100.0 | ||
| KOG0296|consensus | 399 | 100.0 | ||
| KOG0273|consensus | 524 | 100.0 | ||
| KOG0281|consensus | 499 | 100.0 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 100.0 | |
| KOG0643|consensus | 327 | 100.0 | ||
| KOG1407|consensus | 313 | 100.0 | ||
| KOG0293|consensus | 519 | 100.0 | ||
| KOG0292|consensus | 1202 | 100.0 | ||
| KOG0319|consensus | 775 | 100.0 | ||
| KOG0285|consensus | 460 | 100.0 | ||
| KOG0266|consensus | 456 | 100.0 | ||
| KOG1446|consensus | 311 | 100.0 | ||
| KOG0306|consensus | 888 | 100.0 | ||
| KOG0306|consensus | 888 | 100.0 | ||
| KOG0313|consensus | 423 | 100.0 | ||
| KOG0296|consensus | 399 | 100.0 | ||
| KOG0281|consensus | 499 | 100.0 | ||
| KOG0283|consensus | 712 | 100.0 | ||
| KOG0772|consensus | 641 | 100.0 | ||
| KOG0265|consensus | 338 | 100.0 | ||
| PTZ00421 | 493 | coronin; Provisional | 100.0 | |
| KOG0300|consensus | 481 | 100.0 | ||
| TIGR00486 | 249 | YbgI_SA1388 dinuclear metal center protein, YbgI/S | 100.0 | |
| KOG0275|consensus | 508 | 100.0 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 100.0 | |
| KOG0282|consensus | 503 | 100.0 | ||
| KOG0292|consensus | 1202 | 100.0 | ||
| KOG0276|consensus | 794 | 100.0 | ||
| KOG1332|consensus | 299 | 100.0 | ||
| KOG0299|consensus | 479 | 100.0 | ||
| KOG0278|consensus | 334 | 100.0 | ||
| PF01784 | 241 | NIF3: NIF3 (NGG1p interacting factor 3); InterPro: | 100.0 | |
| KOG0640|consensus | 430 | 100.0 | ||
| KOG0277|consensus | 311 | 100.0 | ||
| KOG0277|consensus | 311 | 99.98 | ||
| KOG0647|consensus | 347 | 99.98 | ||
| KOG0293|consensus | 519 | 99.98 | ||
| KOG0289|consensus | 506 | 99.97 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.97 | |
| KOG0268|consensus | 433 | 99.97 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.97 | |
| KOG0288|consensus | 459 | 99.97 | ||
| KOG0973|consensus | 942 | 99.97 | ||
| KOG2096|consensus | 420 | 99.97 | ||
| KOG0310|consensus | 487 | 99.97 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.97 | |
| KOG0310|consensus | 487 | 99.97 | ||
| KOG0264|consensus | 422 | 99.97 | ||
| KOG0316|consensus | 307 | 99.97 | ||
| KOG0278|consensus | 334 | 99.97 | ||
| KOG0274|consensus | 537 | 99.97 | ||
| KOG0305|consensus | 484 | 99.97 | ||
| KOG1036|consensus | 323 | 99.97 | ||
| KOG0289|consensus | 506 | 99.97 | ||
| KOG0643|consensus | 327 | 99.97 | ||
| PRK10799 | 247 | metal-binding protein; Provisional | 99.97 | |
| PTZ00420 | 568 | coronin; Provisional | 99.97 | |
| KOG0973|consensus | 942 | 99.96 | ||
| KOG2445|consensus | 361 | 99.96 | ||
| KOG0294|consensus | 362 | 99.96 | ||
| COG0327 | 250 | Uncharacterized conserved protein [Function unknow | 99.96 | |
| KOG0274|consensus | 537 | 99.96 | ||
| KOG0305|consensus | 484 | 99.96 | ||
| KOG0308|consensus | 735 | 99.96 | ||
| KOG0641|consensus | 350 | 99.96 | ||
| KOG1539|consensus | 910 | 99.96 | ||
| KOG0641|consensus | 350 | 99.96 | ||
| KOG0288|consensus | 459 | 99.96 | ||
| KOG0275|consensus | 508 | 99.96 | ||
| KOG0313|consensus | 423 | 99.96 | ||
| KOG1407|consensus | 313 | 99.96 | ||
| KOG4131|consensus | 272 | 99.96 | ||
| KOG0646|consensus | 476 | 99.96 | ||
| KOG1063|consensus | 764 | 99.96 | ||
| KOG1332|consensus | 299 | 99.96 | ||
| KOG0639|consensus | 705 | 99.96 | ||
| KOG0640|consensus | 430 | 99.95 | ||
| KOG0301|consensus | 745 | 99.95 | ||
| KOG1063|consensus | 764 | 99.95 | ||
| KOG0269|consensus | 839 | 99.95 | ||
| KOG1274|consensus | 933 | 99.95 | ||
| KOG0772|consensus | 641 | 99.95 | ||
| KOG1408|consensus | 1080 | 99.95 | ||
| KOG4283|consensus | 397 | 99.95 | ||
| KOG0264|consensus | 422 | 99.95 | ||
| KOG0300|consensus | 481 | 99.95 | ||
| KOG0299|consensus | 479 | 99.95 | ||
| KOG0650|consensus | 733 | 99.95 | ||
| KOG0269|consensus | 839 | 99.95 | ||
| KOG2106|consensus | 626 | 99.95 | ||
| KOG4328|consensus | 498 | 99.94 | ||
| KOG0283|consensus | 712 | 99.94 | ||
| KOG2919|consensus | 406 | 99.94 | ||
| KOG2055|consensus | 514 | 99.94 | ||
| KOG0308|consensus | 735 | 99.94 | ||
| KOG0267|consensus | 825 | 99.94 | ||
| KOG0639|consensus | 705 | 99.94 | ||
| KOG0302|consensus | 440 | 99.93 | ||
| KOG1446|consensus | 311 | 99.93 | ||
| KOG0646|consensus | 476 | 99.93 | ||
| KOG0267|consensus | 825 | 99.93 | ||
| KOG2106|consensus | 626 | 99.93 | ||
| KOG0268|consensus | 433 | 99.93 | ||
| KOG1273|consensus | 405 | 99.93 | ||
| KOG1539|consensus | 910 | 99.92 | ||
| KOG2048|consensus | 691 | 99.92 | ||
| KOG0321|consensus | 720 | 99.92 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.92 | |
| KOG0302|consensus | 440 | 99.92 | ||
| KOG0647|consensus | 347 | 99.92 | ||
| KOG2445|consensus | 361 | 99.92 | ||
| KOG1036|consensus | 323 | 99.92 | ||
| KOG2048|consensus | 691 | 99.92 | ||
| KOG0270|consensus | 463 | 99.91 | ||
| KOG1408|consensus | 1080 | 99.91 | ||
| KOG4378|consensus | 673 | 99.91 | ||
| KOG0301|consensus | 745 | 99.91 | ||
| KOG1034|consensus | 385 | 99.91 | ||
| KOG2096|consensus | 420 | 99.9 | ||
| KOG4227|consensus | 609 | 99.9 | ||
| KOG0321|consensus | 720 | 99.9 | ||
| KOG0294|consensus | 362 | 99.9 | ||
| KOG1007|consensus | 370 | 99.9 | ||
| KOG0307|consensus | 1049 | 99.89 | ||
| KOG1274|consensus | 933 | 99.89 | ||
| KOG2055|consensus | 514 | 99.89 | ||
| KOG1009|consensus | 434 | 99.89 | ||
| KOG4283|consensus | 397 | 99.89 | ||
| KOG1188|consensus | 376 | 99.88 | ||
| KOG1963|consensus | 792 | 99.88 | ||
| KOG1445|consensus | 1012 | 99.88 | ||
| KOG0307|consensus | 1049 | 99.88 | ||
| KOG1273|consensus | 405 | 99.88 | ||
| KOG0290|consensus | 364 | 99.88 | ||
| KOG1538|consensus | 1081 | 99.88 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.88 | |
| KOG0322|consensus | 323 | 99.87 | ||
| KOG1034|consensus | 385 | 99.87 | ||
| KOG0270|consensus | 463 | 99.86 | ||
| KOG1523|consensus | 361 | 99.86 | ||
| KOG4328|consensus | 498 | 99.86 | ||
| KOG0642|consensus | 577 | 99.86 | ||
| KOG4378|consensus | 673 | 99.86 | ||
| KOG1009|consensus | 434 | 99.86 | ||
| KOG0303|consensus | 472 | 99.85 | ||
| KOG0290|consensus | 364 | 99.85 | ||
| KOG1517|consensus | 1387 | 99.85 | ||
| KOG1334|consensus | 559 | 99.85 | ||
| KOG0650|consensus | 733 | 99.84 | ||
| KOG2919|consensus | 406 | 99.84 | ||
| KOG0644|consensus | 1113 | 99.84 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.84 | |
| KOG1538|consensus | 1081 | 99.83 | ||
| KOG1587|consensus | 555 | 99.83 | ||
| KOG0303|consensus | 472 | 99.82 | ||
| KOG1524|consensus | 737 | 99.82 | ||
| KOG1523|consensus | 361 | 99.82 | ||
| KOG1007|consensus | 370 | 99.81 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.81 | |
| KOG4497|consensus | 447 | 99.81 | ||
| KOG2110|consensus | 391 | 99.8 | ||
| KOG1587|consensus | 555 | 99.8 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.79 | |
| KOG1517|consensus | 1387 | 99.79 | ||
| KOG1310|consensus | 758 | 99.79 | ||
| KOG0771|consensus | 398 | 99.79 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.79 | |
| KOG1188|consensus | 376 | 99.78 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.78 | |
| KOG1963|consensus | 792 | 99.77 | ||
| KOG0771|consensus | 398 | 99.76 | ||
| KOG0642|consensus | 577 | 99.76 | ||
| KOG1445|consensus | 1012 | 99.75 | ||
| KOG0649|consensus | 325 | 99.74 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.74 | |
| KOG2111|consensus | 346 | 99.73 | ||
| KOG2139|consensus | 445 | 99.73 | ||
| KOG1524|consensus | 737 | 99.73 | ||
| KOG4227|consensus | 609 | 99.73 | ||
| KOG1240|consensus | 1431 | 99.73 | ||
| KOG0649|consensus | 325 | 99.73 | ||
| KOG2110|consensus | 391 | 99.72 | ||
| KOG0322|consensus | 323 | 99.72 | ||
| KOG1272|consensus | 545 | 99.7 | ||
| KOG2321|consensus | 703 | 99.69 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.68 | |
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.68 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.67 | |
| KOG0644|consensus | 1113 | 99.65 | ||
| KOG2394|consensus | 636 | 99.65 | ||
| KOG3881|consensus | 412 | 99.65 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.65 | |
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.65 | |
| KOG1409|consensus | 404 | 99.65 | ||
| KOG2139|consensus | 445 | 99.64 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.63 | |
| KOG1354|consensus | 433 | 99.62 | ||
| KOG2394|consensus | 636 | 99.6 | ||
| KOG4497|consensus | 447 | 99.58 | ||
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.58 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.58 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.57 | |
| KOG3881|consensus | 412 | 99.57 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.57 | |
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.56 | |
| KOG0974|consensus | 967 | 99.55 | ||
| KOG2111|consensus | 346 | 99.54 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.54 | |
| KOG1334|consensus | 559 | 99.54 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.54 | |
| KOG1272|consensus | 545 | 99.53 | ||
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.53 | |
| KOG1240|consensus | 1431 | 99.53 | ||
| KOG4547|consensus | 541 | 99.52 | ||
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 99.52 | |
| KOG1310|consensus | 758 | 99.51 | ||
| KOG2041|consensus | 1189 | 99.49 | ||
| KOG0280|consensus | 339 | 99.48 | ||
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 99.46 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.46 | |
| KOG1064|consensus | 2439 | 99.46 | ||
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.46 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.45 | |
| KOG2321|consensus | 703 | 99.43 | ||
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.43 | |
| KOG2315|consensus | 566 | 99.4 | ||
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.39 | |
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.39 | |
| KOG0974|consensus | 967 | 99.39 | ||
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.39 | |
| KOG0280|consensus | 339 | 99.38 | ||
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.36 | |
| KOG1354|consensus | 433 | 99.36 | ||
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 99.35 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 99.35 | |
| KOG4547|consensus | 541 | 99.35 | ||
| KOG0309|consensus | 1081 | 99.33 | ||
| KOG1064|consensus | 2439 | 99.33 | ||
| KOG2314|consensus | 698 | 99.32 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 99.29 | |
| KOG1409|consensus | 404 | 99.29 | ||
| KOG2041|consensus | 1189 | 99.29 | ||
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 99.28 | |
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 99.26 | |
| KOG2314|consensus | 698 | 99.26 | ||
| KOG2315|consensus | 566 | 99.25 | ||
| KOG4190|consensus | 1034 | 99.25 | ||
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 99.24 | |
| KOG4532|consensus | 344 | 99.23 | ||
| KOG4714|consensus | 319 | 99.21 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 99.18 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 99.18 | |
| KOG4532|consensus | 344 | 99.16 | ||
| KOG1912|consensus | 1062 | 99.15 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.13 | |
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 99.11 | |
| KOG3914|consensus | 390 | 99.05 | ||
| KOG3914|consensus | 390 | 99.02 | ||
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 99.01 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 99.01 | |
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 98.99 | |
| KOG1832|consensus | 1516 | 98.99 | ||
| KOG2695|consensus | 425 | 98.97 | ||
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 98.96 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.95 | |
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.93 | |
| KOG4714|consensus | 319 | 98.92 | ||
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 98.92 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 98.91 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 98.9 | |
| KOG0309|consensus | 1081 | 98.9 | ||
| KOG0882|consensus | 558 | 98.9 | ||
| KOG1912|consensus | 1062 | 98.9 | ||
| KOG4190|consensus | 1034 | 98.89 | ||
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 98.87 | |
| KOG0882|consensus | 558 | 98.87 | ||
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 98.83 | |
| KOG1275|consensus | 1118 | 98.79 | ||
| KOG3617|consensus | 1416 | 98.78 | ||
| KOG2695|consensus | 425 | 98.77 | ||
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.74 | |
| KOG1832|consensus | 1516 | 98.74 | ||
| KOG1008|consensus | 783 | 98.73 | ||
| KOG2114|consensus | 933 | 98.72 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 98.71 | |
| KOG1008|consensus | 783 | 98.7 | ||
| KOG2066|consensus | 846 | 98.68 | ||
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 98.67 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 98.67 | |
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.67 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 98.61 | |
| KOG2066|consensus | 846 | 98.6 | ||
| KOG1275|consensus | 1118 | 98.59 | ||
| KOG2114|consensus | 933 | 98.58 | ||
| KOG1920|consensus | 1265 | 98.58 | ||
| KOG1645|consensus | 463 | 98.52 | ||
| KOG1645|consensus | 463 | 98.48 | ||
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.46 | |
| KOG1920|consensus | 1265 | 98.44 | ||
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 98.41 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 98.39 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 98.36 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 98.31 | |
| KOG3621|consensus | 726 | 98.29 | ||
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 98.28 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 98.21 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 98.17 | |
| KOG3621|consensus | 726 | 98.16 | ||
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 98.15 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 98.07 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 98.06 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 98.05 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 98.01 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 97.98 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 97.95 | |
| KOG3617|consensus | 1416 | 97.95 | ||
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 97.89 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 97.88 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 97.86 | |
| KOG4649|consensus | 354 | 97.85 | ||
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 97.85 | |
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.81 | |
| KOG4640|consensus | 665 | 97.77 | ||
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 97.74 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 97.65 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 97.64 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 97.58 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 97.57 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 97.55 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 97.53 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 97.51 | |
| KOG4640|consensus | 665 | 97.48 | ||
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 97.46 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 97.45 | |
| KOG4441|consensus | 571 | 97.42 | ||
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 97.39 | |
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.38 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 97.38 | |
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 97.34 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 97.33 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 97.32 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 97.3 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 97.3 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 97.28 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 97.25 | |
| KOG2444|consensus | 238 | 97.21 | ||
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 97.19 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 97.15 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 97.02 | |
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 97.01 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 97.0 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 96.93 | |
| KOG2395|consensus | 644 | 96.86 | ||
| PHA02713 | 557 | hypothetical protein; Provisional | 96.85 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 96.82 | |
| KOG2079|consensus | 1206 | 96.69 | ||
| KOG4441|consensus | 571 | 96.68 | ||
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 96.66 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 96.58 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 96.51 | |
| KOG2079|consensus | 1206 | 96.51 | ||
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 96.5 | |
| KOG1897|consensus | 1096 | 96.48 | ||
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 96.43 | |
| KOG2395|consensus | 644 | 96.39 | ||
| KOG2444|consensus | 238 | 96.37 | ||
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 96.35 | |
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 96.25 | |
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 96.22 | |
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 96.15 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 96.15 | |
| PRK13684 | 334 | Ycf48-like protein; Provisional | 96.09 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 96.08 | |
| COG5276 | 370 | Uncharacterized conserved protein [Function unknow | 96.04 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 96.04 | |
| KOG2377|consensus | 657 | 95.99 | ||
| PHA02790 | 480 | Kelch-like protein; Provisional | 95.94 | |
| KOG3630|consensus | 1405 | 95.89 | ||
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 95.84 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 95.79 | |
| KOG1916|consensus | 1283 | 95.78 | ||
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 95.77 | |
| KOG4649|consensus | 354 | 95.76 | ||
| KOG2280|consensus | 829 | 95.55 | ||
| PHA03098 | 534 | kelch-like protein; Provisional | 95.52 | |
| KOG1897|consensus | 1096 | 95.46 | ||
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 95.44 | |
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 95.42 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 95.4 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 95.24 | |
| COG5276 | 370 | Uncharacterized conserved protein [Function unknow | 95.2 | |
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 95.11 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 95.0 | |
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 94.94 | |
| KOG1916|consensus | 1283 | 94.78 | ||
| KOG4499|consensus | 310 | 94.67 | ||
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 94.65 | |
| PF14727 | 418 | PHTB1_N: PTHB1 N-terminus | 94.64 | |
| PF14761 | 215 | HPS3_N: Hermansky-Pudlak syndrome 3 | 94.54 | |
| KOG3630|consensus | 1405 | 94.32 | ||
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 94.27 | |
| KOG2377|consensus | 657 | 94.14 | ||
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 93.64 | |
| KOG2280|consensus | 829 | 93.62 | ||
| PRK10115 | 686 | protease 2; Provisional | 93.53 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 93.47 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 93.22 | |
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 93.12 | |
| PRK14131 | 376 | N-acetylneuraminic acid mutarotase; Provisional | 93.1 | |
| PRK13684 | 334 | Ycf48-like protein; Provisional | 92.93 | |
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 92.73 | |
| TIGR03118 | 336 | PEPCTERM_chp_1 conserved hypothetical protein TIGR | 92.65 | |
| PF12657 | 173 | TFIIIC_delta: Transcription factor IIIC subunit de | 92.57 | |
| PF14761 | 215 | HPS3_N: Hermansky-Pudlak syndrome 3 | 92.12 | |
| COG4590 | 733 | ABC-type uncharacterized transport system, permeas | 91.75 | |
| KOG4460|consensus | 741 | 91.7 | ||
| PRK04247 | 238 | hypothetical protein; Provisional | 91.42 | |
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 91.19 | |
| TIGR03547 | 346 | muta_rot_YjhT mutatrotase, YjhT family. Members of | 91.13 | |
| PRK10115 | 686 | protease 2; Provisional | 91.06 | |
| PF14781 | 136 | BBS2_N: Ciliary BBSome complex subunit 2, N-termin | 90.98 | |
| TIGR03606 | 454 | non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH | 90.33 | |
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 90.31 | |
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 90.22 | |
| PLN00033 | 398 | photosystem II stability/assembly factor; Provisio | 90.09 | |
| KOG4499|consensus | 310 | 89.98 | ||
| KOG1900|consensus | 1311 | 89.65 | ||
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 89.64 | |
| PF13449 | 326 | Phytase-like: Esterase-like activity of phytase | 89.53 | |
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 89.09 | |
| COG4257 | 353 | Vgb Streptogramin lyase [Defense mechanisms] | 88.81 | |
| PF07250 | 243 | Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP | 88.58 | |
| PLN02193 | 470 | nitrile-specifier protein | 88.34 | |
| KOG1900|consensus | 1311 | 88.01 | ||
| COG4590 | 733 | ABC-type uncharacterized transport system, permeas | 87.75 | |
| PF13449 | 326 | Phytase-like: Esterase-like activity of phytase | 87.66 | |
| TIGR03606 | 454 | non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH | 87.61 | |
| PLN02153 | 341 | epithiospecifier protein | 87.54 | |
| PF12657 | 173 | TFIIIC_delta: Transcription factor IIIC subunit de | 87.35 | |
| PF14727 | 418 | PHTB1_N: PTHB1 N-terminus | 87.2 | |
| KOG2247|consensus | 615 | 85.85 | ||
| KOG1983|consensus | 993 | 85.83 | ||
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 85.81 | |
| COG4257 | 353 | Vgb Streptogramin lyase [Defense mechanisms] | 85.76 | |
| PF07250 | 243 | Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP | 85.53 | |
| KOG2247|consensus | 615 | 85.35 | ||
| PF12768 | 281 | Rax2: Cortical protein marker for cell polarity | 84.58 | |
| PF02333 | 381 | Phytase: Phytase; InterPro: IPR003431 Phytase (3.1 | 84.41 | |
| PF08801 | 422 | Nucleoporin_N: Nup133 N terminal like; InterPro: I | 84.36 | |
| COG5290 | 1243 | IkappaB kinase complex, IKAP component [Transcript | 84.24 | |
| PF10214 | 765 | Rrn6: RNA polymerase I-specific transcription-init | 83.73 | |
| TIGR03548 | 323 | mutarot_permut cyclically-permuted mutatrotase fam | 83.58 | |
| TIGR03118 | 336 | PEPCTERM_chp_1 conserved hypothetical protein TIGR | 81.73 | |
| TIGR03547 | 346 | muta_rot_YjhT mutatrotase, YjhT family. Members of | 80.87 | |
| PF12768 | 281 | Rax2: Cortical protein marker for cell polarity | 80.69 | |
| PF08801 | 422 | Nucleoporin_N: Nup133 N terminal like; InterPro: I | 80.59 | |
| KOG1983|consensus | 993 | 80.35 |
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-51 Score=353.16 Aligned_cols=314 Identities=24% Similarity=0.449 Sum_probs=280.0
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC----------CccceEEEeecCCcEEEec
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL----------PVETSLRQLVEDKNIRLWG 71 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~~i~~w~ 71 (479)
.+..++.||.++|.|++|+|+|..|+||+-|.++|+||+.+..+..+..+| |++..+++++.+|+|++||
T Consensus 106 rCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwd 185 (480)
T KOG0271|consen 106 RCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWD 185 (480)
T ss_pred eeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEec
Confidence 356788999999999999999999999999999999999999998887776 7889999999999999999
Q ss_pred CCCCCCceeeeEEeccccCCcEEEEEECC-----CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCC
Q psy14815 72 KESFGNKFTAKAILSDGHQRTIRETAWSP-----CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG 146 (479)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-----~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 146 (479)
..+..... ..+.+|...|++++|.| ..++|++++.||.|+|||+..++ ++..+.+|+.+|+|+.|--+|
T Consensus 186 pktg~~~g----~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~--~~~~lsgHT~~VTCvrwGG~g 259 (480)
T KOG0271|consen 186 PKTGQQIG----RALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGT--CVRTLSGHTASVTCVRWGGEG 259 (480)
T ss_pred CCCCCccc----ccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCce--EEEEeccCccceEEEEEcCCc
Confidence 87533322 22479999999999987 56899999999999999999986 788999999999999997554
Q ss_pred CEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEe-----------cCC------------------------
Q psy14815 147 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH-----------PFD------------------------ 191 (479)
Q Consensus 147 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~-----------~~~------------------------ 191 (479)
+|++|+.|++|++|+...+ .+...+++|...|+.++.+ |.+
T Consensus 260 -liySgS~DrtIkvw~a~dG---~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~ 335 (480)
T KOG0271|consen 260 -LIYSGSQDRTIKVWRALDG---KLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDS 335 (480)
T ss_pred -eEEecCCCceEEEEEccch---hHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccC
Confidence 8999999999999999987 7788899999999999876 222
Q ss_pred -CEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCC
Q psy14815 192 -NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDS 270 (479)
Q Consensus 192 -~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 270 (479)
..|++|+.|.++.+|+....+ +++..+.+|..-|+.+.||||++++++++-|..|++||.+.+
T Consensus 336 ~erlVSgsDd~tlflW~p~~~k---kpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tG------------- 399 (480)
T KOG0271|consen 336 GERLVSGSDDFTLFLWNPFKSK---KPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTG------------- 399 (480)
T ss_pred cceeEEecCCceEEEecccccc---cchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCc-------------
Confidence 359999999999999987654 367788999999999999999999999999999999998544
Q ss_pred ceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 271 VWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 271 ~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
+.+.+|++| -.+|+.++|+.|.++|++||.|.++++|++++.+ +..-+.+|...|.++.|+|||..+
T Consensus 400 --k~lasfRGH-v~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkK----------l~~DLpGh~DEVf~vDwspDG~rV 466 (480)
T KOG0271|consen 400 --KFLASFRGH-VAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKK----------LKQDLPGHADEVFAVDWSPDGQRV 466 (480)
T ss_pred --chhhhhhhc-cceeEEEEeccCccEEEEcCCCceEEEEEeeeee----------ecccCCCCCceEEEEEecCCCcee
Confidence 667899998 8899999999999999999999999999999998 777778999999999999999999
Q ss_pred Cccc
Q psy14815 351 QKTN 354 (479)
Q Consensus 351 ~~~~ 354 (479)
++++
T Consensus 467 ~sgg 470 (480)
T KOG0271|consen 467 ASGG 470 (480)
T ss_pred ecCC
Confidence 8876
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-46 Score=323.70 Aligned_cols=273 Identities=25% Similarity=0.441 Sum_probs=250.9
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC----------Cc--cceEEEeecCCcEEEecCCCCC
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL----------PV--ETSLRQLVEDKNIRLWGKESFG 76 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~----------~~--~~~~~~~~~~~~i~~w~~~~~~ 76 (479)
|-+.+|..+.|+++++.|+|||.+|.+++|+..+...+.++.+| |. +..+++++.||++++|+++..
T Consensus 173 gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e- 251 (459)
T KOG0272|consen 173 GDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQE- 251 (459)
T ss_pred cCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCC-
Confidence 56789999999999999999999999999999999888888876 44 458899999999999999842
Q ss_pred CceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC
Q psy14815 77 NKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 156 (479)
Q Consensus 77 ~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg 156 (479)
.....+.+|...|..++|+|+|++|+|++.|.+-++||++++. .+...++|...|.+++|.+||..+++|+.|.
T Consensus 252 ----~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~--ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~ 325 (459)
T KOG0272|consen 252 ----TPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKS--ELLLQEGHSKGVFSIAFQPDGSLAATGGLDS 325 (459)
T ss_pred ----cchhhhhcchhhheeeeecCCCceeeecccccchhhcccccch--hhHhhcccccccceeEecCCCceeeccCccc
Confidence 1222347899999999999999999999999999999999996 5677789999999999999999999999999
Q ss_pred cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEcc-
Q psy14815 157 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR- 235 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~- 235 (479)
.-+|||++++ .++..+.+|..+|.+++|+|+|..|++|+.|++++|||++.... +.++.+|.+-|+.+.|+|
T Consensus 326 ~~RvWDlRtg---r~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~----ly~ipAH~nlVS~Vk~~p~ 398 (459)
T KOG0272|consen 326 LGRVWDLRTG---RCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSE----LYTIPAHSNLVSQVKYSPQ 398 (459)
T ss_pred hhheeecccC---cEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeeccccc----ceecccccchhhheEeccc
Confidence 9999999999 77888999999999999999999999999999999999997664 888999999999999998
Q ss_pred CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcc
Q psy14815 236 IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 236 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~ 311 (479)
.|.+|+|++.|++++||.. .+|.++.++.|| ...|.++..+++++++++++.|.++++|.
T Consensus 399 ~g~fL~TasyD~t~kiWs~---------------~~~~~~ksLaGH-e~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 399 EGYFLVTASYDNTVKIWST---------------RTWSPLKSLAGH-EGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred CCeEEEEcccCcceeeecC---------------CCcccchhhcCC-ccceEEEEeccCCceEEEeccCceeeecc
Confidence 7889999999999999986 677889999998 88999999999999999999999999995
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-44 Score=293.11 Aligned_cols=294 Identities=52% Similarity=1.025 Sum_probs=261.1
Q ss_pred CcccccccccccceEEEEECCC-CCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCce
Q psy14815 1 MINSQTLKGHQGRVWNVSWNPQ-GTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKF 79 (479)
Q Consensus 1 ~~~~~~l~~h~~~V~~l~~s~~-~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~ 79 (479)
+...+++++|++.|..++|+|- |..|||||.|+.||||+...+ ..+
T Consensus 4 l~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~---------------------------------~s~ 50 (312)
T KOG0645|consen 4 LILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSG---------------------------------DSW 50 (312)
T ss_pred ceeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCC---------------------------------CcE
Confidence 3567899999999999999997 889999999999999987531 234
Q ss_pred eeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy14815 80 TAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 159 (479)
Q Consensus 80 ~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~ 159 (479)
..+..+..+|+..|.+++|+|.|++|++++.|.++.||.-..+.++++..+++|+..|.|++|+++|++||+++.|++|-
T Consensus 51 ~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVW 130 (312)
T KOG0645|consen 51 TCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVW 130 (312)
T ss_pred EEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEE
Confidence 55666667999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE
Q psy14815 160 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
+|.+.....+.+...++.|...|..+.|+|...+|++++.|.+|++|+... ...|.+..++.+|.+.|.+++|++.|..
T Consensus 131 iWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~-dddW~c~~tl~g~~~TVW~~~F~~~G~r 209 (312)
T KOG0645|consen 131 IWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDED-DDDWECVQTLDGHENTVWSLAFDNIGSR 209 (312)
T ss_pred EEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecC-CCCeeEEEEecCccceEEEEEecCCCce
Confidence 999998889999999999999999999999999999999999999999876 4478999999999999999999999999
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCC
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS 319 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 319 (479)
|++++.|++++||... ..+...|..+++.+.|. ...|++++.|+.|++|.-... +
T Consensus 210 l~s~sdD~tv~Iw~~~--------------------~~~~~~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~---~ 264 (312)
T KOG0645|consen 210 LVSCSDDGTVSIWRLY--------------------TDLSGMHSRALYDVPWD--NGVIASGGGDDAIRLFKESDS---P 264 (312)
T ss_pred EEEecCCcceEeeeec--------------------cCcchhcccceEeeeec--ccceEeccCCCEEEEEEecCC---C
Confidence 9999999999999853 23334457899999998 558999999999999987733 4
Q ss_pred CceeeEEEeccccccccceeEEEecCC-CCCCCcc
Q psy14815 320 DMVSFDLVHTEHRAHNQDVNCVAWNPV-VPEPQKT 353 (479)
Q Consensus 320 ~~~~~~~~~~~~~~h~~~v~~~~~sp~-~~~l~~~ 353 (479)
+.+.++++......|...|++++|.|. ..+|+++
T Consensus 265 d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~ 299 (312)
T KOG0645|consen 265 DEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASG 299 (312)
T ss_pred CCchHHHHHhhhcccccccceEEEcCCCCCceeec
Confidence 566777777777899999999999995 4455444
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-45 Score=311.78 Aligned_cols=280 Identities=27% Similarity=0.473 Sum_probs=246.1
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccc-cccCC---------------CccceEEEeecCC
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYE-KLHGL---------------PVETSLRQLVEDK 65 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~-~~~~~---------------~~~~~~~~~~~~~ 65 (479)
.+..+.+||...|.|++|+|||+.||+|+.||+|++||..+|+++. .+.+| +....+++.+.||
T Consensus 148 Tp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg 227 (480)
T KOG0271|consen 148 TPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDG 227 (480)
T ss_pred CcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCC
Confidence 4678999999999999999999999999999999999998887653 23332 4566888999999
Q ss_pred cEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-
Q psy14815 66 NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK- 144 (479)
Q Consensus 66 ~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~- 144 (479)
.+++||... ........+|+.+|+|++|--+| ++++|+.|++|++|+...|. +...+++|...|+.++.+.
T Consensus 228 ~vrIWd~~~-----~~~~~~lsgHT~~VTCvrwGG~g-liySgS~DrtIkvw~a~dG~--~~r~lkGHahwvN~lalsTd 299 (480)
T KOG0271|consen 228 SVRIWDTKL-----GTCVRTLSGHTASVTCVRWGGEG-LIYSGSQDRTIKVWRALDGK--LCRELKGHAHWVNHLALSTD 299 (480)
T ss_pred CEEEEEccC-----ceEEEEeccCccceEEEEEcCCc-eEEecCCCceEEEEEccchh--HHHhhcccchheeeeeccch
Confidence 999999873 22334468999999999998655 99999999999999999986 7788999999999998872
Q ss_pred ----------C-------------------------CCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEec
Q psy14815 145 ----------N-------------------------GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 189 (479)
Q Consensus 145 ----------~-------------------------~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~ 189 (479)
. +..|++|+.|.++.+|+-...+ +++....+|..-|+.+.|+|
T Consensus 300 y~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~k--kpi~rmtgHq~lVn~V~fSP 377 (480)
T KOG0271|consen 300 YVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSK--KPITRMTGHQALVNHVSFSP 377 (480)
T ss_pred hhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccc--cchhhhhchhhheeeEEECC
Confidence 1 2359999999999999987654 56778899999999999999
Q ss_pred CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCC
Q psy14815 190 FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND 269 (479)
Q Consensus 190 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 269 (479)
|++++++++.|..|++||.++++. +.++++|-..|+.++|+.|.+.|++|+.|.++++|+++..
T Consensus 378 d~r~IASaSFDkSVkLW~g~tGk~----lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tk------------ 441 (480)
T KOG0271|consen 378 DGRYIASASFDKSVKLWDGRTGKF----LASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTK------------ 441 (480)
T ss_pred CccEEEEeecccceeeeeCCCcch----hhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeee------------
Confidence 999999999999999999998875 8899999999999999999999999999999999998544
Q ss_pred CceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcc
Q psy14815 270 SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 270 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~ 311 (479)
+....+.+| ...|.++.|+|||+.+++|+.|..+++|.
T Consensus 442 ---Kl~~DLpGh-~DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 442 ---KLKQDLPGH-ADEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred ---eecccCCCC-CceEEEEEecCCCceeecCCCceEEEeec
Confidence 555677777 88999999999999999999999999995
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-43 Score=290.50 Aligned_cols=286 Identities=23% Similarity=0.361 Sum_probs=249.9
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC----------CCccceEEEeecCCcEEEec
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG----------LPVETSLRQLVEDKNIRLWG 71 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~w~ 71 (479)
...++|+||.+.|.++.|++|+++|+++|.||.+.|||.-+......+.- .|.++.++.++-|+...+|+
T Consensus 46 ~~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ 125 (343)
T KOG0286|consen 46 RTRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYP 125 (343)
T ss_pred eeEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEe
Confidence 45689999999999999999999999999999999999877665544332 47888999999999999999
Q ss_pred CCCCCCc-eeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEE
Q psy14815 72 KESFGNK-FTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFL 149 (479)
Q Consensus 72 ~~~~~~~-~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l 149 (479)
+...... .........+|.+.+.|+.|-+| ..|+|++.|.+..+||+++++ ....|.+|.+.|.+++++| +++.+
T Consensus 126 ls~~d~~g~~~v~r~l~gHtgylScC~f~dD-~~ilT~SGD~TCalWDie~g~--~~~~f~GH~gDV~slsl~p~~~ntF 202 (343)
T KOG0286|consen 126 LSTRDAEGNVRVSRELAGHTGYLSCCRFLDD-NHILTGSGDMTCALWDIETGQ--QTQVFHGHTGDVMSLSLSPSDGNTF 202 (343)
T ss_pred cccccccccceeeeeecCccceeEEEEEcCC-CceEecCCCceEEEEEcccce--EEEEecCCcccEEEEecCCCCCCeE
Confidence 9854222 22334446899999999999874 589999999999999999997 7789999999999999999 99999
Q ss_pred EEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEE
Q psy14815 150 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW 229 (479)
Q Consensus 150 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~ 229 (479)
++|+.|+..++||++.+ .+.+.+.+|...|++++|.|+|.-+++|++|+++++||++.... ..+.+-..-..+|+
T Consensus 203 vSg~cD~~aklWD~R~~---~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~--~a~ys~~~~~~git 277 (343)
T KOG0286|consen 203 VSGGCDKSAKLWDVRSG---QCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQE--LAVYSHDSIICGIT 277 (343)
T ss_pred EecccccceeeeeccCc---ceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcE--EeeeccCcccCCce
Confidence 99999999999999998 88899999999999999999999999999999999999997654 22333334456899
Q ss_pred EEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEE
Q psy14815 230 SLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 309 (479)
Q Consensus 230 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~v 309 (479)
+++||..|++|++|..|.++.+||.-+. +.+..+.+| +..|+++..+|||.-+++||.|.+++|
T Consensus 278 Sv~FS~SGRlLfagy~d~~c~vWDtlk~---------------e~vg~L~GH-eNRvScl~~s~DG~av~TgSWDs~lri 341 (343)
T KOG0286|consen 278 SVAFSKSGRLLFAGYDDFTCNVWDTLKG---------------ERVGVLAGH-ENRVSCLGVSPDGMAVATGSWDSTLRI 341 (343)
T ss_pred eEEEcccccEEEeeecCCceeEeecccc---------------ceEEEeecc-CCeeEEEEECCCCcEEEecchhHheee
Confidence 9999999999999999999999997443 446778887 899999999999999999999999999
Q ss_pred cc
Q psy14815 310 FK 311 (479)
Q Consensus 310 w~ 311 (479)
|.
T Consensus 342 W~ 343 (343)
T KOG0286|consen 342 WA 343 (343)
T ss_pred cC
Confidence 94
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=269.69 Aligned_cols=290 Identities=23% Similarity=0.348 Sum_probs=230.9
Q ss_pred cccccccccccceEEEEECCC-CCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQ-GTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~-~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
.+.-+|++|++.|+.++..+. .+.+++++.|.++.+|++..... .+.
T Consensus 6 ~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~--------------------------------~~G 53 (315)
T KOG0279|consen 6 VLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDI--------------------------------KYG 53 (315)
T ss_pred eeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCcc--------------------------------ccC
Confidence 456789999999999999986 56889999999999999754311 111
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
.....+.+|...|..+..+++|++.++++.|+++++||+.+++ ..+.|.+|...|.+++|++|.+.+++|+.|.+|++
T Consensus 54 ~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~--~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTikl 131 (315)
T KOG0279|consen 54 VPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGE--STRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKL 131 (315)
T ss_pred ceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCc--EEEEEEecCCceEEEEecCCCceeecCCCcceeee
Confidence 2223347899999999999999999999999999999999996 77889999999999999999999999999999999
Q ss_pred EEeCCCCceeeeeeeec--cccceeEEEEecC--CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC
Q psy14815 161 WEVGEEDEYECAAVINA--HIQDVKKVRFHPF--DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 236 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~--~~~~v~~l~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 236 (479)
|++.... ..+... +...|+|++|+|+ ..+|++++.|++|++||+++.+. ...+.+|++.++.+++|||
T Consensus 132 wnt~g~c----k~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l----~~~~~gh~~~v~t~~vSpD 203 (315)
T KOG0279|consen 132 WNTLGVC----KYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQL----RTTFIGHSGYVNTVTVSPD 203 (315)
T ss_pred eeecccE----EEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcch----hhccccccccEEEEEECCC
Confidence 9998752 222322 2678999999997 68999999999999999996653 6778899999999999999
Q ss_pred CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 237 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 237 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
|..+++|+.||.+.+||++... .+.++.. ...|.+++|+|+.-.|+.+. +..|+|||+.++.
T Consensus 204 GslcasGgkdg~~~LwdL~~~k---------------~lysl~a--~~~v~sl~fspnrywL~~at-~~sIkIwdl~~~~ 265 (315)
T KOG0279|consen 204 GSLCASGGKDGEAMLWDLNEGK---------------NLYSLEA--FDIVNSLCFSPNRYWLCAAT-ATSIKIWDLESKA 265 (315)
T ss_pred CCEEecCCCCceEEEEEccCCc---------------eeEeccC--CCeEeeEEecCCceeEeecc-CCceEEEeccchh
Confidence 9999999999999999996653 3444443 67999999999987666654 5679999999876
Q ss_pred CCCCceeeEEEeccccccccceeEEEecCCCCCCCc
Q psy14815 317 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 317 ~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~ 352 (479)
-.. .-..+......+...-...+++||+||+.|..
T Consensus 266 ~v~-~l~~d~~g~s~~~~~~~clslaws~dG~tLf~ 300 (315)
T KOG0279|consen 266 VVE-ELKLDGIGPSSKAGDPICLSLAWSADGQTLFA 300 (315)
T ss_pred hhh-hccccccccccccCCcEEEEEEEcCCCcEEEe
Confidence 110 00000011101111234567899999998743
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=262.16 Aligned_cols=287 Identities=22% Similarity=0.384 Sum_probs=238.6
Q ss_pred CeEEEeeCCCcEEEEecccccccccccCCCcc---------ceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEE
Q psy14815 24 TMISSCGEDKNIRLWVMVIREPYEKLHGLPVE---------TSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 94 (479)
Q Consensus 24 ~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~---------~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~ 94 (479)
-+|+|+|.|.+||+|...+|.+..++...... ...+++.....|++||+++.+.. ....+.+|.+.|+
T Consensus 11 viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~qhvRlyD~~S~np~---Pv~t~e~h~kNVt 87 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQHVRLYDLNSNNPN---PVATFEGHTKNVT 87 (311)
T ss_pred eEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCCeeEEEEccCCCCC---ceeEEeccCCceE
Confidence 47899999999999999999999888754332 23344455677999999965443 2333579999999
Q ss_pred EEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeee
Q psy14815 95 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAV 174 (479)
Q Consensus 95 ~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 174 (479)
++.|..+|+.+++|++||+++|||++... +.+.++ |..+|+++..+|+-..|++|..+|.|++||+... .+...
T Consensus 88 aVgF~~dgrWMyTgseDgt~kIWdlR~~~--~qR~~~-~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~---~c~~~ 161 (311)
T KOG0315|consen 88 AVGFQCDGRWMYTGSEDGTVKIWDLRSLS--CQRNYQ-HNSPVNTVVLHPNQTELISGDQSGNIRVWDLGEN---SCTHE 161 (311)
T ss_pred EEEEeecCeEEEecCCCceEEEEeccCcc--cchhcc-CCCCcceEEecCCcceEEeecCCCcEEEEEccCC---ccccc
Confidence 99999999999999999999999999854 444444 7799999999999999999999999999999886 22222
Q ss_pred -eeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcc--cceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEE
Q psy14815 175 -INAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE--ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKI 251 (479)
Q Consensus 175 -~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i 251 (479)
......+|+++...|+|..++.+...|.+++|++-+.. ....++.+++.|.+.+..+.+||++++|+++|.|.+++|
T Consensus 162 liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~i 241 (311)
T KOG0315|consen 162 LIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKI 241 (311)
T ss_pred cCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEE
Confidence 23344679999999999999999999999999986533 345678889999999999999999999999999999999
Q ss_pred EeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccc
Q psy14815 252 WKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH 331 (479)
Q Consensus 252 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~ 331 (479)
|+.... .+....+.+| ...+++++||.||+||++|+.|+.+++|++..++ .....
T Consensus 242 wn~~~~--------------~kle~~l~gh-~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k----------~v~qy 296 (311)
T KOG0315|consen 242 WNTDDF--------------FKLELVLTGH-QRWVWDCAFSADGEYLVTASSDHTARLWDLSAGK----------EVRQY 296 (311)
T ss_pred EecCCc--------------eeeEEEeecC-CceEEeeeeccCccEEEecCCCCceeecccccCc----------eeeec
Confidence 998432 3566788887 7899999999999999999999999999999998 44455
Q ss_pred cccccceeEEEec
Q psy14815 332 RAHNQDVNCVAWN 344 (479)
Q Consensus 332 ~~h~~~v~~~~~s 344 (479)
.+|..+..|++..
T Consensus 297 ~gh~K~~vc~~ln 309 (311)
T KOG0315|consen 297 QGHHKAAVCVALN 309 (311)
T ss_pred CCcccccEEEEee
Confidence 6888877777653
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-41 Score=292.32 Aligned_cols=264 Identities=20% Similarity=0.297 Sum_probs=236.4
Q ss_pred CCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCC--CCEEEEEECCCeEEEEECCCCeEEEeE
Q psy14815 51 GLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC--GNFIASASFDATTAVWDKRSGQFECNA 128 (479)
Q Consensus 51 ~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~ 128 (479)
...++..+++++-+|.+++|+.... .....+.+|...|.++.|+|. +..+|||+.||++++|++.+.. .+.
T Consensus 183 fS~ds~~laT~swsG~~kvW~~~~~-----~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~--~l~ 255 (459)
T KOG0272|consen 183 FSRDSKHLATGSWSGLVKVWSVPQC-----NLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQET--PLQ 255 (459)
T ss_pred eecCCCeEEEeecCCceeEeecCCc-----ceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCc--chh
Confidence 3466788999999999999998843 223335799999999999996 6789999999999999998875 788
Q ss_pred EEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEec
Q psy14815 129 TLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE 208 (479)
Q Consensus 129 ~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~ 208 (479)
.+.+|...|..++|+|+|++|+|++.|.+-++||+++. ..+....+|...|.+++|.|+|.++++|+.|..-+|||+
T Consensus 256 ~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk---~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDl 332 (459)
T KOG0272|consen 256 DLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETK---SELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDL 332 (459)
T ss_pred hhhcchhhheeeeecCCCceeeecccccchhhcccccc---hhhHhhcccccccceeEecCCCceeeccCccchhheeec
Confidence 99999999999999999999999999999999999998 455667899999999999999999999999999999999
Q ss_pred CCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEE
Q psy14815 209 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYD 288 (479)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 288 (479)
+++.. +..+.+|..+|.++.|+|+|..|+|||.|++++|||++... ++.++..| .+-|+.
T Consensus 333 Rtgr~----im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~---------------~ly~ipAH-~nlVS~ 392 (459)
T KOG0272|consen 333 RTGRC----IMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRS---------------ELYTIPAH-SNLVSQ 392 (459)
T ss_pred ccCcE----EEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccc---------------cceecccc-cchhhh
Confidence 98875 88899999999999999999999999999999999996653 35677776 889999
Q ss_pred EEecC-CCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 289 ISWCH-LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 289 l~~~~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+.|+| .|.+|++++.|+++++|...+.. +...+.||.+.|-+++.+||+.++++++
T Consensus 393 Vk~~p~~g~fL~TasyD~t~kiWs~~~~~----------~~ksLaGHe~kV~s~Dis~d~~~i~t~s 449 (459)
T KOG0272|consen 393 VKYSPQEGYFLVTASYDNTVKIWSTRTWS----------PLKSLAGHEGKVISLDISPDSQAIATSS 449 (459)
T ss_pred eEecccCCeEEEEcccCcceeeecCCCcc----------cchhhcCCccceEEEEeccCCceEEEec
Confidence 99998 68899999999999999999887 5555689999999999999999997765
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=270.89 Aligned_cols=286 Identities=23% Similarity=0.396 Sum_probs=242.6
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
.+...+.||++.|+.+.|+|+|.+||||+.|..|.+|++..... +.
T Consensus 38 ap~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdce----------------------------------N~ 83 (338)
T KOG0265|consen 38 APIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCE----------------------------------NF 83 (338)
T ss_pred chhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEecccccc----------------------------------ce
Confidence 35667889999999999999999999999999999999642221 00
Q ss_pred eEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC-CCEEEEEeCCCcEEE
Q psy14815 82 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN-GQFLATCSRDKSVWV 160 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~~~dg~i~v 160 (479)
....+|.++|..+.|.+|++.+++++.|.+++.||+++|+ ..+.+++|.+.|.++.-+.- ..++.+++.||++++
T Consensus 84 --~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~--~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl 159 (338)
T KOG0265|consen 84 --WVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGK--RIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKL 159 (338)
T ss_pred --eeeccccceeEeeeeccCCCEEEEecCCceEEEEecccce--eeehhccccceeeecCccccCCeEEEecCCCceEEE
Confidence 1125899999999999999999999999999999999997 78889999999999985443 357788999999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEE
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 240 (479)
||++.. ..++.+ ..+.+++++.|..++..+++|+-|+.|++||+++... ...+.+|..+|+.+..+++|.++
T Consensus 160 ~D~R~k---~~~~t~-~~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~----~~~lsGh~DtIt~lsls~~gs~l 231 (338)
T KOG0265|consen 160 WDIRKK---EAIKTF-ENKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDG----LYTLSGHADTITGLSLSRYGSFL 231 (338)
T ss_pred Eeeccc---chhhcc-ccceeEEEEEecccccceeeccccCceeeeccccCcc----eEEeecccCceeeEEeccCCCcc
Confidence 999987 333333 2356789999999999999999999999999997764 78899999999999999999999
Q ss_pred EEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc---ccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCC
Q psy14815 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH---HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAG 317 (479)
Q Consensus 241 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~ 317 (479)
.+-+.|.++++||++.... ..+++..+.+| .+.....++|+|++..+.+|+.|..+++||.....
T Consensus 232 lsnsMd~tvrvwd~rp~~p-----------~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~- 299 (338)
T KOG0265|consen 232 LSNSMDNTVRVWDVRPFAP-----------SQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRR- 299 (338)
T ss_pred ccccccceEEEEEecccCC-----------CCceEEEeecchhhhhhhcceeeccCCCCccccccccceEEEeeccccc-
Confidence 9999999999999976533 23667777776 23456778999999999999999999999999977
Q ss_pred CCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 318 DSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 318 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+...+.+|.+.|++++|+|..++|-+.+
T Consensus 300 ---------~lyklpGh~gsvn~~~Fhp~e~iils~~ 327 (338)
T KOG0265|consen 300 ---------ILYKLPGHYGSVNEVDFHPTEPIILSCS 327 (338)
T ss_pred ---------EEEEcCCcceeEEEeeecCCCcEEEEec
Confidence 5555579999999999999999886554
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-40 Score=308.82 Aligned_cols=282 Identities=24% Similarity=0.418 Sum_probs=236.0
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
..|+..-...++|..|++|+.+||.|-.|..|++|.+... .++++.....-..+-..+.|-.+...|.+. . ...
T Consensus 371 ~YT~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~-kl~~lk~~~~l~~~d~~sad~~~~~~D~~~---~--~~~ 444 (707)
T KOG0263|consen 371 MYTFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPK-KLKKLKDASDLSNIDTESADVDVDMLDDDS---S--GTS 444 (707)
T ss_pred EEEEEEcCCcceeEeecCCcchhhccccccEEEEEecchh-hhccccchhhhccccccccchhhhhccccC---C--cee
Confidence 3445555678999999999999999999999999998654 222332222222222222333333333332 1 112
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
....+|.++|..+.|+|+.++|+++++|+++|+|.+.+.. +...+++|..+|..+.|+|.|-+|+|++.|++.++|..
T Consensus 445 ~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s--~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~ 522 (707)
T KOG0263|consen 445 RTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWS--CLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWST 522 (707)
T ss_pred EEeecCCCceeeeeecccccceeeccCCcceeeeecccce--eEEEecCCCcceeeEEecCCceEEEecCCCceeeeeec
Confidence 2247999999999999999999999999999999999886 77888899999999999999999999999999999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
... .+.+.+.+|.+.|.|+.|+|+.+++++|+.|.+|++||..++.. ++.+.+|.++|.+++|||+|++|++|
T Consensus 523 d~~---~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~----VRiF~GH~~~V~al~~Sp~Gr~LaSg 595 (707)
T KOG0263|consen 523 DHN---KPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNS----VRIFTGHKGPVTALAFSPCGRYLASG 595 (707)
T ss_pred ccC---CchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcE----EEEecCCCCceEEEEEcCCCceEeec
Confidence 886 67788999999999999999999999999999999999998875 78889999999999999999999999
Q ss_pred eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 244 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 244 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+.||.|++||+..+ ..+..+.+| .+.|.++.|+.+|..||+|+.|.+|++||+....
T Consensus 596 ~ed~~I~iWDl~~~---------------~~v~~l~~H-t~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~ 652 (707)
T KOG0263|consen 596 DEDGLIKIWDLANG---------------SLVKQLKGH-TGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVI 652 (707)
T ss_pred ccCCcEEEEEcCCC---------------cchhhhhcc-cCceeEEEEecCCCEEEecCCCCeEEEEEchhhc
Confidence 99999999999443 557788888 8899999999999999999999999999987654
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-38 Score=277.32 Aligned_cols=302 Identities=24% Similarity=0.426 Sum_probs=255.7
Q ss_pred cccccccceEEEEECCCCC-eEEEeeCCCcEEEEecccc------------------------cccccccCCCccceEEE
Q psy14815 6 TLKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWVMVIR------------------------EPYEKLHGLPVETSLRQ 60 (479)
Q Consensus 6 ~l~~h~~~V~~l~~s~~~~-~l~t~~~dg~v~iwd~~~~------------------------~~~~~~~~~~~~~~~~~ 60 (479)
.+. |+..|.+.+|+|... .+++|+.|-+.++|++... +.+..+....++..+++
T Consensus 174 vl~-~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~Lat 252 (524)
T KOG0273|consen 174 VLR-HESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLAT 252 (524)
T ss_pred ecc-CCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEE
Confidence 344 999999999999666 8999999999999998641 11122223356788999
Q ss_pred eecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEE
Q psy14815 61 LVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV 140 (479)
Q Consensus 61 ~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l 140 (479)
+..+|.+++|+... .....+..|.++|.++.|+.+|.+|++++.|+++.+||..+++ ....+.-|..+-..+
T Consensus 253 G~~~G~~riw~~~G------~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~--~~q~f~~~s~~~lDV 324 (524)
T KOG0273|consen 253 GSEDGEARIWNKDG------NLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGT--VKQQFEFHSAPALDV 324 (524)
T ss_pred eecCcEEEEEecCc------hhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCce--EEEeeeeccCCccce
Confidence 99999999999872 2223346799999999999999999999999999999999997 455666677776788
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeee
Q psy14815 141 TWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT 220 (479)
Q Consensus 141 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 220 (479)
.|-.+ ..|++++.||.|+++.+... .+..++.+|.++|.++.|+|.+.+|++++.|++++||...... ....
T Consensus 325 dW~~~-~~F~ts~td~~i~V~kv~~~---~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~----~~~~ 396 (524)
T KOG0273|consen 325 DWQSN-DEFATSSTDGCIHVCKVGED---RPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSN----SVHD 396 (524)
T ss_pred EEecC-ceEeecCCCceEEEEEecCC---CcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCc----chhh
Confidence 99754 56999999999999999887 6677888999999999999999999999999999999987655 3778
Q ss_pred ecCCCccEEEEEEccCC---------CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEe
Q psy14815 221 LKSHTSTVWSLAFDRIG---------SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW 291 (479)
Q Consensus 221 ~~~~~~~v~~~~~~~~~---------~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 291 (479)
+..|...|..+.|+|.| ..+++++.|++|++||+. .+.+++++..| ..+|++++|
T Consensus 397 l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~---------------~gv~i~~f~kH-~~pVysvaf 460 (524)
T KOG0273|consen 397 LQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVE---------------SGVPIHTLMKH-QEPVYSVAF 460 (524)
T ss_pred hhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEcc---------------CCceeEeeccC-CCceEEEEe
Confidence 89999999999999965 478999999999999984 44778899887 889999999
Q ss_pred cCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCC
Q psy14815 292 CHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 292 ~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 351 (479)
+|+|+|+|+|+.||.|.+|+.++++ +.... ...+.|..++|+.+|..|.
T Consensus 461 S~~g~ylAsGs~dg~V~iws~~~~~----------l~~s~-~~~~~Ifel~Wn~~G~kl~ 509 (524)
T KOG0273|consen 461 SPNGRYLASGSLDGCVHIWSTKTGK----------LVKSY-QGTGGIFELCWNAAGDKLG 509 (524)
T ss_pred cCCCcEEEecCCCCeeEeccccchh----------eeEee-cCCCeEEEEEEcCCCCEEE
Confidence 9999999999999999999999998 44443 4456799999999998874
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-39 Score=274.39 Aligned_cols=282 Identities=27% Similarity=0.449 Sum_probs=257.2
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
+.+.+.||..+|+.+-|.|+-...++++.|++|++||..+++....+
T Consensus 100 l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~L--------------------------------- 146 (406)
T KOG0295|consen 100 LVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSL--------------------------------- 146 (406)
T ss_pred chhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhh---------------------------------
Confidence 45678899999999999999999999999999999999999986665
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd 162 (479)
.+|.+.+.+++|+..|+++++++.|=.+.+||..+- ..++..+.+|...|.++.|-|.|.++++++.|.+|+.|+
T Consensus 147 ----rGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~-~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We 221 (406)
T KOG0295|consen 147 ----RGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTF-FRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWE 221 (406)
T ss_pred ----hccccceeEEEEecCccEEEecCCccchhheeHHHH-HHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEe
Confidence 689999999999999999999999999999999874 357788889999999999999999999999999999999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC------
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI------ 236 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------ 236 (479)
+.++ .++.++.+|...|+.++.+.||.++++++.|.++++|-+.+... ...++.|+.+|.+++|.|.
T Consensus 222 ~~tg---~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~----k~~lR~hEh~vEci~wap~~~~~~i 294 (406)
T KOG0295|consen 222 CDTG---YCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQC----KAELREHEHPVECIAWAPESSYPSI 294 (406)
T ss_pred cccc---eeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchh----hhhhhccccceEEEEecccccCcch
Confidence 9998 88999999999999999999999999999999999999987643 5678899999999999763
Q ss_pred ---------CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeE
Q psy14815 237 ---------GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAI 307 (479)
Q Consensus 237 ---------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i 307 (479)
++++.+++.|++|++||+ .++.|+.++.+| ...|..++|+|.|+||+++.+|+++
T Consensus 295 ~~at~~~~~~~~l~s~SrDktIk~wdv---------------~tg~cL~tL~gh-dnwVr~~af~p~Gkyi~ScaDDktl 358 (406)
T KOG0295|consen 295 SEATGSTNGGQVLGSGSRDKTIKIWDV---------------STGMCLFTLVGH-DNWVRGVAFSPGGKYILSCADDKTL 358 (406)
T ss_pred hhccCCCCCccEEEeecccceEEEEec---------------cCCeEEEEEecc-cceeeeeEEcCCCeEEEEEecCCcE
Confidence 258999999999999998 556899999998 9999999999999999999999999
Q ss_pred EEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcccc
Q psy14815 308 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTNL 355 (479)
Q Consensus 308 ~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 355 (479)
++||++.++ |+... ..|...+++++|+.+.+++.++++
T Consensus 359 rvwdl~~~~---------cmk~~-~ah~hfvt~lDfh~~~p~VvTGsV 396 (406)
T KOG0295|consen 359 RVWDLKNLQ---------CMKTL-EAHEHFVTSLDFHKTAPYVVTGSV 396 (406)
T ss_pred EEEEeccce---------eeecc-CCCcceeEEEecCCCCceEEeccc
Confidence 999999998 56555 499999999999999998877764
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-38 Score=258.48 Aligned_cols=255 Identities=22% Similarity=0.330 Sum_probs=211.3
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
+++.|+||+..|..+..++||++.++++.|+++|+||+.+++....|
T Consensus 55 ~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f--------------------------------- 101 (315)
T KOG0279|consen 55 PVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRF--------------------------------- 101 (315)
T ss_pred eeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEE---------------------------------
Confidence 57899999999999999999999999999999999999988765444
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCC--CCcEEEEEEcCC--CCEEEEEeCCCcE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGH--ENEVKSVTWSKN--GQFLATCSRDKSV 158 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~v~~l~~~~~--~~~l~~~~~dg~i 158 (479)
.+|...|.+++|++|.+.+++|+.|.+|++|+.... +..+...+ .+.|+|+.|+|+ ..+|++++.|++|
T Consensus 102 ----~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~---ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~Dktv 174 (315)
T KOG0279|consen 102 ----VGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGV---CKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTV 174 (315)
T ss_pred ----EecCCceEEEEecCCCceeecCCCcceeeeeeeccc---EEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceE
Confidence 689999999999999999999999999999999876 34444333 789999999997 6799999999999
Q ss_pred EEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCC
Q psy14815 159 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS 238 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 238 (479)
++||+++. +....+.+|.+.++.++++|||.++++|+.||.+.+||++.++. +..+ .|...|.+++|+|+.-
T Consensus 175 KvWnl~~~---~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~----lysl-~a~~~v~sl~fspnry 246 (315)
T KOG0279|consen 175 KVWNLRNC---QLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKN----LYSL-EAFDIVNSLCFSPNRY 246 (315)
T ss_pred EEEccCCc---chhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCce----eEec-cCCCeEeeEEecCCce
Confidence 99999987 66778889999999999999999999999999999999997764 4444 5788999999999876
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccC
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 313 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~ 313 (479)
.|+.+. +..|+|||+........+.... .+. ..+. ......+++|+++|+.|++|-.|+.|++|.+.
T Consensus 247 wL~~at-~~sIkIwdl~~~~~v~~l~~d~---~g~---s~~~-~~~~clslaws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 247 WLCAAT-ATSIKIWDLESKAVVEELKLDG---IGP---SSKA-GDPICLSLAWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred eEeecc-CCceEEEeccchhhhhhccccc---ccc---cccc-CCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence 666554 5569999997665443322110 000 1111 13345688999999999999999999999864
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-40 Score=283.38 Aligned_cols=286 Identities=23% Similarity=0.397 Sum_probs=243.4
Q ss_pred cccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
-+.+|..+.|.|+|+.|+||++.|.+.+|+..+. ........|
T Consensus 95 vkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~f-------------------------------------nFEtilQaH 137 (464)
T KOG0284|consen 95 VKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSF-------------------------------------NFETILQAH 137 (464)
T ss_pred cccceeeEEEcCCCceeEeecccccEEEecCcee-------------------------------------eHHHHhhhh
Confidence 3568999999999999999999999999985211 111224789
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCC-CcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHE-NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 168 (479)
.++|+++.|++++.++++|+.+|.|++|+..-.. +..+..|. ..|.+++|+|+...|++++.||+|+|||....
T Consensus 138 Ds~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnn---Vk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~-- 212 (464)
T KOG0284|consen 138 DSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNN---VKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMP-- 212 (464)
T ss_pred cccceeEEEccCCCEEEEcCCCceEEecccchhh---hHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCC--
Confidence 9999999999999999999999999999987653 34444444 89999999999999999999999999999987
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCe
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 248 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~ 248 (479)
.....+.+|.-.|++++|+|...++++|+.|..|++||.+++.. +.++..|...|..+.|++++++|+++|.|..
T Consensus 213 -kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~c----l~tlh~HKntVl~~~f~~n~N~Llt~skD~~ 287 (464)
T KOG0284|consen 213 -KEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSC----LATLHGHKNTVLAVKFNPNGNWLLTGSKDQS 287 (464)
T ss_pred -chhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcch----hhhhhhccceEEEEEEcCCCCeeEEccCCce
Confidence 44456789999999999999999999999999999999998775 8899999999999999999999999999999
Q ss_pred EEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCC-CCeEEEEeCCCeEEEcccCCCCCCCCceeeEEE
Q psy14815 249 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL-TDLIATACGDDAIRIFKENPEAGDSDMVSFDLV 327 (479)
Q Consensus 249 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~-~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~ 327 (479)
++++|++.. +.++++++| ...+++++|+|- ..+|.+|+.||.|..|.+...+ .+
T Consensus 288 ~kv~DiR~m---------------kEl~~~r~H-kkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~---------p~ 342 (464)
T KOG0284|consen 288 CKVFDIRTM---------------KELFTYRGH-KKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEE---------PL 342 (464)
T ss_pred EEEEehhHh---------------HHHHHhhcc-hhhheeeccccccccceeeccCCCceEEEeccccc---------cc
Confidence 999999643 346788887 889999999994 5689999999999999998655 46
Q ss_pred eccccccccceeEEEecCCCCCCCcccccHHHHHHHHHHhCC
Q psy14815 328 HTEHRAHNQDVNCVAWNPVVPEPQKTNLTLHDVVRRLEAMAP 369 (479)
Q Consensus 328 ~~~~~~h~~~v~~~~~sp~~~~l~~~~~~~~~~~~~l~~~~p 369 (479)
..+..+|...|++++|+|-|..|+.++- ...++++.+..|
T Consensus 343 ~~i~~AHd~~iwsl~~hPlGhil~tgsn--d~t~rfw~r~rp 382 (464)
T KOG0284|consen 343 GEIPPAHDGEIWSLAYHPLGHILATGSN--DRTVRFWTRNRP 382 (464)
T ss_pred cCCCcccccceeeeeccccceeEeecCC--CcceeeeccCCC
Confidence 6677899999999999999999988752 233444444333
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=272.36 Aligned_cols=325 Identities=20% Similarity=0.328 Sum_probs=241.7
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEeccccccccc------------ccCCCccc---------------
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEK------------LHGLPVET--------------- 56 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~------------~~~~~~~~--------------- 56 (479)
...+..|...++-..|||.|.|+|+|...|+|||||....+.+.+ +....++.
T Consensus 52 ~~iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~ 131 (603)
T KOG0318|consen 52 VDIYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHV 131 (603)
T ss_pred eeeeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEE
Confidence 346778999999999999999999999999999999765332211 11112222
Q ss_pred ------------------------------eEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEE
Q psy14815 57 ------------------------------SLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA 106 (479)
Q Consensus 57 ------------------------------~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~ 106 (479)
.++++++|+.+.+|+ +.++..+ .....|..-|.|+.|+|||.+++
T Consensus 132 F~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffe----GPPFKFk-~s~r~HskFV~~VRysPDG~~Fa 206 (603)
T KOG0318|consen 132 FLWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFE----GPPFKFK-SSFREHSKFVNCVRYSPDGSRFA 206 (603)
T ss_pred EEecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEee----CCCeeee-ecccccccceeeEEECCCCCeEE
Confidence 234444555555553 2222222 23467899999999999999999
Q ss_pred EEECCCeEEEEECCCCeEEEeEEEe---CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCce--------------
Q psy14815 107 SASFDATTAVWDKRSGQFECNATLE---GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY-------------- 169 (479)
Q Consensus 107 t~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~-------------- 169 (479)
+++.||++.+||=.+++ .+..+. +|.+.|.+++|+||++.+++++.|.++++||+.+.+..
T Consensus 207 t~gsDgki~iyDGktge--~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqv 284 (603)
T KOG0318|consen 207 TAGSDGKIYIYDGKTGE--KVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQV 284 (603)
T ss_pred EecCCccEEEEcCCCcc--EEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEE
Confidence 99999999999999986 455665 89999999999999999999999999999998754211
Q ss_pred --------------------------eeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC
Q psy14815 170 --------------------------ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS 223 (479)
Q Consensus 170 --------------------------~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 223 (479)
.....+.+|...|+++..+|++++|++|+.||.|.-|+..++.... ..-+.
T Consensus 285 G~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~---~~g~~ 361 (603)
T KOG0318|consen 285 GCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDR---LAGKG 361 (603)
T ss_pred EEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccc---ccccc
Confidence 1123456899999999999999999999999999999987544210 00011
Q ss_pred CCc-----------------------------------------------------------------------------
Q psy14815 224 HTS----------------------------------------------------------------------------- 226 (479)
Q Consensus 224 ~~~----------------------------------------------------------------------------- 226 (479)
|..
T Consensus 362 h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~ 441 (603)
T KOG0318|consen 362 HTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIP 441 (603)
T ss_pred ccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeec
Confidence 222
Q ss_pred ---cEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeC
Q psy14815 227 ---TVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 303 (479)
Q Consensus 227 ---~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~ 303 (479)
...+++++|+++.++.|+.|+.|++|.+..... ........| ..+|++++|+||+.|||++..
T Consensus 442 ~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l-------------~ee~~~~~h-~a~iT~vaySpd~~yla~~Da 507 (603)
T KOG0318|consen 442 IGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDEL-------------KEEAKLLEH-RAAITDVAYSPDGAYLAAGDA 507 (603)
T ss_pred cccccceEEEcCCCCEEEEecccceEEEEEecCCcc-------------cceeeeecc-cCCceEEEECCCCcEEEEecc
Confidence 234566677777777777777777777644322 112233343 889999999999999999999
Q ss_pred CCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcccccHHHHH
Q psy14815 304 DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTNLTLHDVV 361 (479)
Q Consensus 304 dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~~~~~~~ 361 (479)
.+.+.+||+.+++ ........|.+.|++++|||+...+|.+++...-++
T Consensus 508 ~rkvv~yd~~s~~---------~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Vii 556 (603)
T KOG0318|consen 508 SRKVVLYDVASRE---------VKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVII 556 (603)
T ss_pred CCcEEEEEcccCc---------eecceeeeeeeeEEEEEeCCCceEEEeccccceEEE
Confidence 9999999999987 222233459999999999999999999986543333
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-38 Score=268.96 Aligned_cols=251 Identities=24% Similarity=0.361 Sum_probs=228.3
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
++.+.++||.+.|.|+++.|..++|+||+.|++++|||+.+|+...++
T Consensus 142 Kl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~Lkltl-------------------------------- 189 (460)
T KOG0285|consen 142 KLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTL-------------------------------- 189 (460)
T ss_pred eehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEee--------------------------------
Confidence 456789999999999999999999999999999999999998876655
Q ss_pred eEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14815 82 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vw 161 (479)
.+|...|..+++|+.-.|+++++.|+.|+.||++.++ .++.+.+|-+.|.|++.+|.-..|++|+.|..+++|
T Consensus 190 -----tGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nk--vIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvW 262 (460)
T KOG0285|consen 190 -----TGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNK--VIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVW 262 (460)
T ss_pred -----cchhheeeeeeecccCceEEEecCCCeeEEEechhhh--hHHHhccccceeEEEeccccceeEEecCCcceEEEe
Confidence 5799999999999999999999999999999999986 788899999999999999999999999999999999
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 241 (479)
|+++. ..+..+.+|..+|.++.+.|-...+++|+.|++|++||++.++. ..++..|...|.+++.+|....++
T Consensus 263 DiRtr---~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt----~~tlt~hkksvral~lhP~e~~fA 335 (460)
T KOG0285|consen 263 DIRTR---ASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKT----MITLTHHKKSVRALCLHPKENLFA 335 (460)
T ss_pred eeccc---ceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCce----eEeeecccceeeEEecCCchhhhh
Confidence 99998 66788999999999999999888999999999999999998775 778889999999999999999999
Q ss_pred EeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 242 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 242 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+++.|. |+-|++..+ ..+..+.+| ...|++++.+.|+ ++++|+++|.+.+||.+++.
T Consensus 336 Sas~dn-ik~w~~p~g---------------~f~~nlsgh-~~iintl~~nsD~-v~~~G~dng~~~fwdwksg~ 392 (460)
T KOG0285|consen 336 SASPDN-IKQWKLPEG---------------EFLQNLSGH-NAIINTLSVNSDG-VLVSGGDNGSIMFWDWKSGH 392 (460)
T ss_pred ccCCcc-ceeccCCcc---------------chhhccccc-cceeeeeeeccCc-eEEEcCCceEEEEEecCcCc
Confidence 999875 999998443 445567776 7899999998776 78899999999999999885
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=283.38 Aligned_cols=334 Identities=19% Similarity=0.298 Sum_probs=274.4
Q ss_pred CcccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccc--cccccCC----------CccceEEEeecCCcEE
Q psy14815 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREP--YEKLHGL----------PVETSLRQLVEDKNIR 68 (479)
Q Consensus 1 ~~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~--~~~~~~~----------~~~~~~~~~~~~~~i~ 68 (479)
|.+.+++.||.+.|+++.|+.|.++|++||.|-+++||.++..+. ...+.+| .+...+.+.+.||.+.
T Consensus 135 Fvl~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~~k~~~~~~l~gHkd~VvacfF~~~~~~l~tvskdG~l~ 214 (893)
T KOG0291|consen 135 FVLHRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDGNKNLFTYALNGHKDYVVACFFGANSLDLYTVSKDGALF 214 (893)
T ss_pred ceEeeeecCCccceeEEEeccCCceEEeccccceEEEEEeccccccceEeccCCCcceEEEEeccCcceEEEEecCceEE
Confidence 456789999999999999999999999999999999999887665 3334444 2355688899999999
Q ss_pred EecCCCC----------------------CCc------eee-eEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEEC
Q psy14815 69 LWGKESF----------------------GNK------FTA-KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDK 119 (479)
Q Consensus 69 ~w~~~~~----------------------~~~------~~~-~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~ 119 (479)
+|..... +.+ +.. +..........|++.+|++..+.|++|-..|...+|.+
T Consensus 215 ~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~Lyel 294 (893)
T KOG0291|consen 215 VWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYEL 294 (893)
T ss_pred EEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCeeEEEec
Confidence 9987610 011 111 11222334488999999999999999999999999999
Q ss_pred CCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEE
Q psy14815 120 RSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 198 (479)
Q Consensus 120 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~ 198 (479)
..-. .++.+.-...+|..+.|+..|..++.|+.. |.+.+|+..+. ..+...++|...+++++++|||+++++|+
T Consensus 295 P~f~--lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsE---sYVlKQQgH~~~i~~l~YSpDgq~iaTG~ 369 (893)
T KOG0291|consen 295 PDFN--LIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSE---SYVLKQQGHSDRITSLAYSPDGQLIATGA 369 (893)
T ss_pred CCce--EEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeecc---ceeeeccccccceeeEEECCCCcEEEecc
Confidence 8765 677777777899999999999999999874 89999999987 55667789999999999999999999999
Q ss_pred cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCC----------
Q psy14815 199 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDN---------- 268 (479)
Q Consensus 199 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---------- 268 (479)
+||.|++||.+.+- ++.++..|.+.|+.+.|+..++.+++.+.||+|+.||+....+...+..|.+
T Consensus 370 eDgKVKvWn~~Sgf----C~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~ 445 (893)
T KOG0291|consen 370 EDGKVKVWNTQSGF----CFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDP 445 (893)
T ss_pred CCCcEEEEeccCce----EEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcC
Confidence 99999999999654 6899999999999999999999999999999999999987766555443322
Q ss_pred -------------------CCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEec
Q psy14815 269 -------------------DSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHT 329 (479)
Q Consensus 269 -------------------~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~ 329 (479)
.++++.+-.+.|| .+||.+++|+|++..|+++|.|.+||+||+-...+. ...
T Consensus 446 sGelV~AG~~d~F~IfvWS~qTGqllDiLsGH-EgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~--------vEt 516 (893)
T KOG0291|consen 446 SGELVCAGAQDSFEIFVWSVQTGQLLDILSGH-EGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGT--------VET 516 (893)
T ss_pred CCCEEEeeccceEEEEEEEeecCeeeehhcCC-CCcceeeEEccccCeEEeccccceEEEEEeeccCce--------eee
Confidence 1335666677787 899999999999999999999999999999776411 222
Q ss_pred cccccccceeEEEecCCCCCCCccc
Q psy14815 330 EHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 330 ~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+ .+...+..++|+|||+.|+...
T Consensus 517 l--~i~sdvl~vsfrPdG~elaVaT 539 (893)
T KOG0291|consen 517 L--EIRSDVLAVSFRPDGKELAVAT 539 (893)
T ss_pred E--eeccceeEEEEcCCCCeEEEEE
Confidence 2 4567899999999999996553
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=282.51 Aligned_cols=331 Identities=21% Similarity=0.342 Sum_probs=256.1
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEE
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAI 84 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~ 84 (479)
...+||...++|++++|||+++|||+.||.|+|||..++-++.+|
T Consensus 344 lKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTF----------------------------------- 388 (893)
T KOG0291|consen 344 LKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTF----------------------------------- 388 (893)
T ss_pred eeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEe-----------------------------------
Confidence 345799999999999999999999999999999999887776665
Q ss_pred eccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCC-CcEEEEEEcCCCCEEEEEeCCC-cEEEEE
Q psy14815 85 LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHE-NEVKSVTWSKNGQFLATCSRDK-SVWVWE 162 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~l~~~~~dg-~i~vwd 162 (479)
..|++.|+.+.|+..++.+++.+.||+|+.||+...+ ..+++.... -...|++..|.|..++.|+.|. .|.+|+
T Consensus 389 --teHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYr--NfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS 464 (893)
T KOG0291|consen 389 --TEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYR--NFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWS 464 (893)
T ss_pred --ccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccc--eeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEE
Confidence 6799999999999999999999999999999998775 455554332 3567888899999999998886 599999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
+.++ +.+..+.+|++||.+++|+|.++.|++++.|.+|++||+-..... ..++ .+...+..++|.|+|+.|++
T Consensus 465 ~qTG---qllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~---vEtl-~i~sdvl~vsfrPdG~elaV 537 (893)
T KOG0291|consen 465 VQTG---QLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGT---VETL-EIRSDVLAVSFRPDGKELAV 537 (893)
T ss_pred eecC---eeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCce---eeeE-eeccceeEEEEcCCCCeEEE
Confidence 9999 778889999999999999999999999999999999998755331 2222 36678999999999999999
Q ss_pred eeCCCeEEEEeccCCCCCCCCCCCCCCCceEE----EEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCC
Q psy14815 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC----VCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 318 (479)
Q Consensus 243 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 318 (479)
++.||.|.+||.....+...+........++. +..-........+.+++++||.++++|+....|++|++..+-
T Consensus 538 aTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~~~v-- 615 (893)
T KOG0291|consen 538 ATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGESNSICIYDVPEGV-- 615 (893)
T ss_pred EEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCcccEEEEECchhh--
Confidence 99999999999987766544332211111111 111111235689999999999999999999999999988763
Q ss_pred CCceeeEEEeccccc-------------------------------------------------------cccceeEEEe
Q psy14815 319 SDMVSFDLVHTEHRA-------------------------------------------------------HNQDVNCVAW 343 (479)
Q Consensus 319 ~~~~~~~~~~~~~~~-------------------------------------------------------h~~~v~~~~~ 343 (479)
++..+... ..-.|.++.|
T Consensus 616 -------llkkfqiS~N~sLdg~~efln~rkmtEfG~~~LiD~e~~~~e~~i~~~lpG~~~gdlssRr~rpeIrv~sv~f 688 (893)
T KOG0291|consen 616 -------LLKKFQISDNRSLDGVLEFLNRRKMTEFGNMDLIDTEESDLEGRIDIALPGVQRGDLSSRRFRPEIRVTSVQF 688 (893)
T ss_pred -------eeeeEEeccccchhHHHHHhccccccccCCccccccccccccccccccCCccccCCccccccCceEEEEEEEE
Confidence 11111000 0113455556
Q ss_pred cCCCCCCCcccccHHHHHHHHHHhCCCccCCCCCcceeeeccCCCcCcccEEEEEecCCHHHHHHHHHcC
Q psy14815 344 NPVVPEPQKTNLTLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENG 413 (479)
Q Consensus 344 sp~~~~l~~~~~~~~~~~~~l~~~~p~~~a~~wd~~Gl~v~~~~~~~~v~~il~~~d~t~~~~~~a~~~~ 413 (479)
||.|+..|... ..|+.+...+..--...+-+.+|+||+.+++|+..+
T Consensus 689 sPtgraFAaat-----------------------TEGl~IYsld~~~~FDPf~LD~~vTPe~v~~al~~q 735 (893)
T KOG0291|consen 689 SPTGRAFAAAT-----------------------TEGLLIYSLDTTILFDPFDLDVDVTPESVREALREQ 735 (893)
T ss_pred CCCcCeeeeec-----------------------ccceEEEecCCceEEcccccccccCHHHHHHHHhcc
Confidence 66555444332 347777766644556777788999999999999876
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=291.42 Aligned_cols=251 Identities=27% Similarity=0.486 Sum_probs=216.8
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
.++|.||+++|....|+|+.++|+++|.|+++|+|.+.+...+..
T Consensus 444 ~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~----------------------------------- 488 (707)
T KOG0263|consen 444 SRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVI----------------------------------- 488 (707)
T ss_pred eEEeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEE-----------------------------------
Confidence 467899999999999999999999999999999999876554332
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
..+|..+|+++.|+|.|-++||++.|++-++|.....+ +.+.+.+|.+.|.|+.|+|++.++++||.|.+||+||+
T Consensus 489 --y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~--PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv 564 (707)
T KOG0263|consen 489 --YKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNK--PLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDV 564 (707)
T ss_pred --ecCCCcceeeEEecCCceEEEecCCCceeeeeecccCC--chhhhcccccccceEEECCcccccccCCCCceEEEEEc
Confidence 36899999999999999999999999999999988765 77888999999999999999999999999999999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
.++ ..++.+.+|.++|.+++|+|+|++|++|+.||.|.+||+.++.. +.++.+|.+.|.++.|+.+|..|++|
T Consensus 565 ~~G---~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~----v~~l~~Ht~ti~SlsFS~dg~vLasg 637 (707)
T KOG0263|consen 565 STG---NSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSL----VKQLKGHTGTIYSLSFSRDGNVLASG 637 (707)
T ss_pred CCC---cEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcc----hhhhhcccCceeEEEEecCCCEEEec
Confidence 999 66788999999999999999999999999999999999998775 78899999999999999999999999
Q ss_pred eCCCeEEEEeccCCCCCCC---C------CCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEE
Q psy14815 244 SDDATVKIWKEYKPGNSAG---I------PTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA 301 (479)
Q Consensus 244 ~~dg~i~iwd~~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~ 301 (479)
+.|.+|++||+........ + ..........++.++... ..+|..+.|....-.|++|
T Consensus 638 g~DnsV~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llgs~~tK-~tpv~~l~FtrrNl~L~~g 703 (707)
T KOG0263|consen 638 GADNSVRLWDLTKVIELLNLGHISTSNSAITQENNASSLLLGSFYTK-NTPVVGLHFTRRNLLLAVG 703 (707)
T ss_pred CCCCeEEEEEchhhcccccccccccccccccccCCCCcceeeeeeec-CceEEEEEEeccceeEEec
Confidence 9999999999876554410 0 001112333466677765 6799999998766555554
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-37 Score=247.13 Aligned_cols=277 Identities=20% Similarity=0.321 Sum_probs=239.3
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
.++.|..|.++|..+.|+-||+|.+|++.|++|++||...+..++++
T Consensus 9 r~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktY--------------------------------- 55 (307)
T KOG0316|consen 9 RLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTY--------------------------------- 55 (307)
T ss_pred hceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeee---------------------------------
Confidence 45678899999999999999999999999999999998888877766
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd 162 (479)
.+|...|..++.+.|...+++|+.|..+.+||+++|+ ..+.+.+|...|+.+.|+.+...+++|+.|.++++||
T Consensus 56 ----sghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGk--v~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wD 129 (307)
T KOG0316|consen 56 ----SGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGK--VDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWD 129 (307)
T ss_pred ----cCCCceeeeccccccccccccCCCCceEEEEEcccCe--eeeecccccceeeEEEecCcceEEEeccccceeEEEE
Confidence 5789999999999999999999999999999999997 7889999999999999999999999999999999999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
.++.. .++++.+......|.++..+ +..+++|+.||+++.||++.+.. . -.....+|++++|+++++..+.
T Consensus 130 CRS~s-~ePiQildea~D~V~Si~v~--~heIvaGS~DGtvRtydiR~G~l----~--sDy~g~pit~vs~s~d~nc~La 200 (307)
T KOG0316|consen 130 CRSRS-FEPIQILDEAKDGVSSIDVA--EHEIVAGSVDGTVRTYDIRKGTL----S--SDYFGHPITSVSFSKDGNCSLA 200 (307)
T ss_pred cccCC-CCccchhhhhcCceeEEEec--ccEEEeeccCCcEEEEEeeccee----e--hhhcCCcceeEEecCCCCEEEE
Confidence 99864 37788888888899999887 67899999999999999997763 2 2334568999999999999999
Q ss_pred eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccc-ccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCc
Q psy14815 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG-RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDM 321 (479)
Q Consensus 243 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 321 (479)
++.|+++++.|- .+++.+..+++|.. ..-..++++.....+++|++||.|++||+....
T Consensus 201 ~~l~stlrLlDk---------------~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~----- 260 (307)
T KOG0316|consen 201 SSLDSTLRLLDK---------------ETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDET----- 260 (307)
T ss_pred eeccceeeeccc---------------chhHHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEeccce-----
Confidence 999999999996 44566777888733 233566778888899999999999999999887
Q ss_pred eeeEEEeccccccccc-eeEEEecCCCCCCCc
Q psy14815 322 VSFDLVHTEHRAHNQD-VNCVAWNPVVPEPQK 352 (479)
Q Consensus 322 ~~~~~~~~~~~~h~~~-v~~~~~sp~~~~l~~ 352 (479)
....+..+... |.+++++|....+..
T Consensus 261 -----~~sk~~~~~~v~v~dl~~hp~~~~f~~ 287 (307)
T KOG0316|consen 261 -----QISKLSVVSTVIVTDLSCHPTMDDFIT 287 (307)
T ss_pred -----eeeeeccCCceeEEeeecccCccceeE
Confidence 44444556666 899999998776633
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=290.05 Aligned_cols=282 Identities=27% Similarity=0.456 Sum_probs=241.1
Q ss_pred cccccc-ccceEEEEECCCCCeEEEeeCCCcEEEEeccccc--ccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 5 QTLKGH-QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIRE--PYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 5 ~~l~~h-~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
+++.+| ...|+|+.|+++|+++++++.|+.+++|+..... ....
T Consensus 152 ~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~--------------------------------- 198 (456)
T KOG0266|consen 152 QTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRE--------------------------------- 198 (456)
T ss_pred eeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhcc---------------------------------
Confidence 445444 8899999999999999999999999999985544 1111
Q ss_pred eEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14815 82 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vw 161 (479)
..+|...|.+++|+|++.++++++.|++|+|||+.... ..+..+.+|...|++++|+|+++++++|+.|++|++|
T Consensus 199 ----l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~-~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriW 273 (456)
T KOG0266|consen 199 ----LSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDG-RNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIW 273 (456)
T ss_pred ----ccccccceeeeEECCCCcEEEEecCCceEEEeeccCCC-eEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEE
Confidence 15899999999999999999999999999999994432 3778899999999999999999999999999999999
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCcc--EEEEEEccCCCE
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST--VWSLAFDRIGSR 239 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~ 239 (479)
|++++ ++...+.+|...|++++|++++++|++++.|+.|++||+.++... +...+..+... ++++.|+|++++
T Consensus 274 d~~~~---~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~--~~~~~~~~~~~~~~~~~~fsp~~~~ 348 (456)
T KOG0266|consen 274 DVRTG---ECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKL--CLKLLSGAENSAPVTSVQFSPNGKY 348 (456)
T ss_pred eccCC---eEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCcee--eeecccCCCCCCceeEEEECCCCcE
Confidence 99997 788899999999999999999999999999999999999987631 24455555544 999999999999
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccc--cEEEEEecCCCCeEEEEeCCCeEEEcccCCCCC
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR--TIYDISWCHLTDLIATACGDDAIRIFKENPEAG 317 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~ 317 (479)
+++++.|+.+++||+... .+...+.+|... .+.+...++.++++++|+.|+.|++|+..++.
T Consensus 349 ll~~~~d~~~~~w~l~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~- 412 (456)
T KOG0266|consen 349 LLSASLDRTLKLWDLRSG---------------KSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGG- 412 (456)
T ss_pred EEEecCCCeEEEEEccCC---------------cceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCccc-
Confidence 999999999999999554 445666676443 55556667899999999999999999999876
Q ss_pred CCCceeeEEEecccccc-ccceeEEEecCCCCCCCccc
Q psy14815 318 DSDMVSFDLVHTEHRAH-NQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 318 ~~~~~~~~~~~~~~~~h-~~~v~~~~~sp~~~~l~~~~ 354 (479)
......+| ...+..++|+|...+++...
T Consensus 413 ---------~~~~l~~h~~~~~~~~~~~~~~~~~~s~s 441 (456)
T KOG0266|consen 413 ---------ILQRLEGHSKAAVSDLSSHPTENLIASSS 441 (456)
T ss_pred ---------hhhhhcCCCCCceeccccCCCcCeeeecC
Confidence 44555788 88999999999999887765
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-38 Score=270.88 Aligned_cols=250 Identities=26% Similarity=0.454 Sum_probs=216.8
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEE
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAI 84 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~ 84 (479)
..++.|..+|+++.|+++|.++++|+.+|.|++|+..-... + .
T Consensus 132 tilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnV-k------------------------------------~ 174 (464)
T KOG0284|consen 132 TILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNV-K------------------------------------I 174 (464)
T ss_pred HHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhh-H------------------------------------H
Confidence 35689999999999999999999999999999997532111 1 1
Q ss_pred eccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeC
Q psy14815 85 LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 164 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~ 164 (479)
....|...|++++|+|+...+++++.||+|+|||....+ ....+.+|.-.|.+++|+|...++++|+.|..|++||.+
T Consensus 175 ~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~k--ee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDpr 252 (464)
T KOG0284|consen 175 IQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPK--EERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPR 252 (464)
T ss_pred hhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCc--hhheeccCCCCcceeccCCccceeEEccCCceeEeecCC
Confidence 113456999999999999999999999999999998776 456679999999999999999999999999999999999
Q ss_pred CCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC-CCEEEEe
Q psy14815 165 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLATC 243 (479)
Q Consensus 165 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~ 243 (479)
++ .++.++..|+..|..+.|+|++++|++++.|..+++||+++.+. +..+++|...|+++.|+|- ...|.+|
T Consensus 253 Sg---~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkE----l~~~r~Hkkdv~~~~WhP~~~~lftsg 325 (464)
T KOG0284|consen 253 SG---SCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKE----LFTYRGHKKDVTSLTWHPLNESLFTSG 325 (464)
T ss_pred Cc---chhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHH----HHHhhcchhhheeeccccccccceeec
Confidence 99 78889999999999999999999999999999999999995553 7888999999999999995 4677899
Q ss_pred eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCC
Q psy14815 244 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 244 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
+.||.|..|.+... +++..+...|...|++++|+|-|.+|++|+.|.++++|.....
T Consensus 326 g~Dgsvvh~~v~~~---------------~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~rp 382 (464)
T KOG0284|consen 326 GSDGSVVHWVVGLE---------------EPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRNRP 382 (464)
T ss_pred cCCCceEEEecccc---------------ccccCCCcccccceeeeeccccceeEeecCCCcceeeeccCCC
Confidence 99999999998522 2233444446889999999999999999999999999976543
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-36 Score=276.57 Aligned_cols=322 Identities=25% Similarity=0.387 Sum_probs=253.6
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC---------Cc-----cceEEEeecCCcEE
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL---------PV-----ETSLRQLVEDKNIR 68 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~---------~~-----~~~~~~~~~~~~i~ 68 (479)
++.+++.|...|++++|++|+.-++++|.|..+.|||+.+.+....+... +. +..+.+.+.++.++
T Consensus 184 cl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~ 263 (775)
T KOG0319|consen 184 CLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVVQ 263 (775)
T ss_pred HHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCceEE
Confidence 46678899999999999999999999999999999998544433222110 00 11223333333333
Q ss_pred EecCCC--------------------------------------------------------------CCC---------
Q psy14815 69 LWGKES--------------------------------------------------------------FGN--------- 77 (479)
Q Consensus 69 ~w~~~~--------------------------------------------------------------~~~--------- 77 (479)
+||.++ .++
T Consensus 264 ~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVAT 343 (775)
T KOG0319|consen 264 YWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVAT 343 (775)
T ss_pred EEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEe
Confidence 333221 000
Q ss_pred ---------ceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCC--eEEEeEEEeCCCCcEEEEEEcCC-
Q psy14815 78 ---------KFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG--QFECNATLEGHENEVKSVTWSKN- 145 (479)
Q Consensus 78 ---------~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~v~~l~~~~~- 145 (479)
.......+..+|...|.++....+|.+|+||+.|.++++|.++.+ +..++....+|.+.|.+++++..
T Consensus 344 Ns~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~ 423 (775)
T KOG0319|consen 344 NSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLG 423 (775)
T ss_pred CCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccC
Confidence 001112245799999999997677889999999999999988443 23355666899999999999764
Q ss_pred CCEEEEEeCCCcEEEEEeCCCCceee------eeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeee
Q psy14815 146 GQFLATCSRDKSVWVWEVGEEDEYEC------AAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFA 219 (479)
Q Consensus 146 ~~~l~~~~~dg~i~vwd~~~~~~~~~------~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 219 (479)
..+|+++|.|+++++|++...+.... ......|...|+|++++|+.+++++|+.|++.++|++... ....
T Consensus 424 asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~----~l~~ 499 (775)
T KOG0319|consen 424 ASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQL----RLLG 499 (775)
T ss_pred ccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCc----eEEE
Confidence 46899999999999999987322111 1234579999999999999999999999999999999944 4588
Q ss_pred eecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEE
Q psy14815 220 TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA 299 (479)
Q Consensus 220 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~ 299 (479)
.+.+|...|+++.|+|..+.++|+|.|++|+||.+ .++.|+.++.|| ...|..+.|-.+++.|+
T Consensus 500 vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~i---------------s~fSClkT~eGH-~~aVlra~F~~~~~qli 563 (775)
T KOG0319|consen 500 VLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSI---------------STFSCLKTFEGH-TSAVLRASFIRNGKQLI 563 (775)
T ss_pred EeeCCccceEEEEeccccceeEeccCCceEEEEEe---------------ccceeeeeecCc-cceeEeeeeeeCCcEEE
Confidence 99999999999999999999999999999999998 667999999998 88999999999999999
Q ss_pred EEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 300 TACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 300 ~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+++.||-|++|+++++. |..+ +.+|+..|++++-+|....+..++
T Consensus 564 S~~adGliKlWnikt~e---------C~~t-lD~H~DrvWaL~~~~~~~~~~tgg 608 (775)
T KOG0319|consen 564 SAGADGLIKLWNIKTNE---------CEMT-LDAHNDRVWALSVSPLLDMFVTGG 608 (775)
T ss_pred eccCCCcEEEEeccchh---------hhhh-hhhccceeEEEeecCccceeEecC
Confidence 99999999999999998 5554 479999999999999988765443
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=268.36 Aligned_cols=280 Identities=33% Similarity=0.569 Sum_probs=237.0
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
++++|++|.++|++++|+|++++|++++.||.+++|++.+++....
T Consensus 1 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~---------------------------------- 46 (289)
T cd00200 1 LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRT---------------------------------- 46 (289)
T ss_pred CchHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEE----------------------------------
Confidence 3578899999999999999999999999999999999876543222
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd 162 (479)
...|...+..+.|+|+++++++++.+|.|++||+.+++ ....+..|...+.++.|+++++++++++.+|.+++||
T Consensus 47 ---~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~ 121 (289)
T cd00200 47 ---LKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGE--CVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWD 121 (289)
T ss_pred ---EecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCccc--ceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEE
Confidence 14677888999999999999999999999999999875 5566778888999999999988888888899999999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
+++. .....+..|...+++++|+|++.++++++.++.|++||++..+. ...+..|...+.++.|+|+++.+++
T Consensus 122 ~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~ 194 (289)
T cd00200 122 VETG---KCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKC----VATLTGHTGEVNSVAFSPDGEKLLS 194 (289)
T ss_pred CCCc---EEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEcccccc----ceeEecCccccceEEECCCcCEEEE
Confidence 9866 45556668888999999999999888888899999999986553 5566688889999999999999999
Q ss_pred eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCce
Q psy14815 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMV 322 (479)
Q Consensus 243 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 322 (479)
++.|+.|++||++.. +.+..+..+ ...+.++.|+|++.++++++.||.|++|++..++
T Consensus 195 ~~~~~~i~i~d~~~~---------------~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~------ 252 (289)
T cd00200 195 SSSDGTIKLWDLSTG---------------KCLGTLRGH-ENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGE------ 252 (289)
T ss_pred ecCCCcEEEEECCCC---------------ceecchhhc-CCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCce------
Confidence 999999999998543 334455454 6689999999998888888889999999998765
Q ss_pred eeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 323 SFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 323 ~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.... ...|...|.+++|+|++++|+.+.
T Consensus 253 ---~~~~-~~~~~~~i~~~~~~~~~~~l~~~~ 280 (289)
T cd00200 253 ---CVQT-LSGHTNSVTSLAWSPDGKRLASGS 280 (289)
T ss_pred ---eEEE-ccccCCcEEEEEECCCCCEEEEec
Confidence 2333 348888999999999998886654
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=245.79 Aligned_cols=268 Identities=18% Similarity=0.266 Sum_probs=231.9
Q ss_pred ccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCC----eE
Q psy14815 49 LHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG----QF 124 (479)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~----~~ 124 (479)
+...++...+++++.||.+.+||.-+.++... ..-....|..++|+|.|+++|+|+.|+...||++.+. ..
T Consensus 61 ~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~ha-----ipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~ 135 (343)
T KOG0286|consen 61 MDWSTDSRRIVSASQDGKLIVWDSFTTNKVHA-----IPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNV 135 (343)
T ss_pred eEecCCcCeEEeeccCCeEEEEEcccccceeE-----EecCceeEEEEEECCCCCeEEecCcCceeEEEecccccccccc
Confidence 34456788899999999999999875332221 2335678999999999999999999999999999854 22
Q ss_pred EEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcE
Q psy14815 125 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTV 203 (479)
Q Consensus 125 ~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i 203 (479)
.....+.+|.+.+.|+.|.+| ..|+|++.|.+..+||++++ +....+.+|.+.|.++.++| +++.+++|+-|+..
T Consensus 136 ~v~r~l~gHtgylScC~f~dD-~~ilT~SGD~TCalWDie~g---~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~a 211 (343)
T KOG0286|consen 136 RVSRELAGHTGYLSCCRFLDD-NHILTGSGDMTCALWDIETG---QQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSA 211 (343)
T ss_pred eeeeeecCccceeEEEEEcCC-CceEecCCCceEEEEEcccc---eEEEEecCCcccEEEEecCCCCCCeEEecccccce
Confidence 356678999999999999975 56999999999999999998 67788999999999999999 99999999999999
Q ss_pred EEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc-c
Q psy14815 204 KLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-H 282 (479)
Q Consensus 204 ~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 282 (479)
++||++.+. +..++.+|.+.|+++.|.|+|.-+++|++|+++++||++...+. ..+... .
T Consensus 212 klWD~R~~~----c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~---------------a~ys~~~~ 272 (343)
T KOG0286|consen 212 KLWDVRSGQ----CVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQEL---------------AVYSHDSI 272 (343)
T ss_pred eeeeccCcc----eeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEE---------------eeeccCcc
Confidence 999999765 58899999999999999999999999999999999999876543 222211 2
Q ss_pred cccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 283 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 283 ~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
..+|++++||..|++|++|..|.++.+||.-.++ ....+.+|...|+++..+|||..++.++
T Consensus 273 ~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e----------~vg~L~GHeNRvScl~~s~DG~av~TgS 334 (343)
T KOG0286|consen 273 ICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGE----------RVGVLAGHENRVSCLGVSPDGMAVATGS 334 (343)
T ss_pred cCCceeEEEcccccEEEeeecCCceeEeeccccc----------eEEEeeccCCeeEEEEECCCCcEEEecc
Confidence 5689999999999999999999999999998887 6666789999999999999999998876
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=263.17 Aligned_cols=292 Identities=21% Similarity=0.290 Sum_probs=232.0
Q ss_pred CcccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 1 ~~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
|+-..+++.|..-|+|+.|+|||++++|++.||++.+||=.+++.+..+..
T Consensus 180 FKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~----------------------------- 230 (603)
T KOG0318|consen 180 FKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELED----------------------------- 230 (603)
T ss_pred eeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecC-----------------------------
Confidence 345678889999999999999999999999999999999888888776632
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEE-----------------------------------
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE----------------------------------- 125 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~----------------------------------- 125 (479)
..+|.+.|.+++|+||+..++|++.|.+++|||+.+++..
T Consensus 231 -----~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~l 305 (603)
T KOG0318|consen 231 -----SDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYL 305 (603)
T ss_pred -----CCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEe
Confidence 1578899999999999999999999999999988764311
Q ss_pred ------EeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceee-----------e----------------
Q psy14815 126 ------CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYEC-----------A---------------- 172 (479)
Q Consensus 126 ------~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~-----------~---------------- 172 (479)
....+.+|...|+++..++++++|++|+.||.|.-|+...+..-+. +
T Consensus 306 n~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~ 385 (603)
T KOG0318|consen 306 NPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDT 385 (603)
T ss_pred cccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCe
Confidence 1223458999999999999999999999999999999864321100 0
Q ss_pred -e------------------------------------------eeecc--------ccceeEEEEecCCCEEEEEEcCC
Q psy14815 173 -A------------------------------------------VINAH--------IQDVKKVRFHPFDNILASASYDD 201 (479)
Q Consensus 173 -~------------------------------------------~~~~~--------~~~v~~l~~~~~~~~l~~~~~dg 201 (479)
. .++.+ .....+++++|+++.++.|+.|+
T Consensus 386 l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dg 465 (603)
T KOG0318|consen 386 LRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDG 465 (603)
T ss_pred EEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccc
Confidence 0 00000 01135788999999999999999
Q ss_pred cEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc
Q psy14815 202 TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH 281 (479)
Q Consensus 202 ~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (479)
.|++|.+..... .....+..|.++|++++||||+.+|++|...+.+.+||...... ....+..|
T Consensus 466 kvhvysl~g~~l--~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~--------------~~~~w~FH 529 (603)
T KOG0318|consen 466 KVHVYSLSGDEL--KEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREV--------------KTNRWAFH 529 (603)
T ss_pred eEEEEEecCCcc--cceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCce--------------ecceeeee
Confidence 999999987653 23445677999999999999999999999999999999854432 12233334
Q ss_pred ccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCc
Q psy14815 282 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 282 ~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~ 352 (479)
...|.+++|+|+..++|+|+-|..|.||+++... ........|...|+.+.|-.+...+..
T Consensus 530 -takI~~~aWsP~n~~vATGSlDt~Viiysv~kP~---------~~i~iknAH~~gVn~v~wlde~tvvSs 590 (603)
T KOG0318|consen 530 -TAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPA---------KHIIIKNAHLGGVNSVAWLDESTVVSS 590 (603)
T ss_pred -eeeEEEEEeCCCceEEEeccccceEEEEEccChh---------hheEeccccccCceeEEEecCceEEec
Confidence 7899999999999999999999999999998765 124455689988999999988776643
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-37 Score=271.75 Aligned_cols=279 Identities=20% Similarity=0.375 Sum_probs=236.9
Q ss_pred ccccccccccceEEEEECC-CCCeEEEeeCCCcEEEEeccc-ccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 3 NSQTLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWVMVI-REPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~-~~~~l~t~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
.+.++.||+..|+++.|.| .+.+|++++.|+.|+||++.. +.++.++
T Consensus 206 ~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf------------------------------- 254 (503)
T KOG0282|consen 206 LSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTF------------------------------- 254 (503)
T ss_pred heeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhh-------------------------------
Confidence 4678999999999999999 899999999999999999865 5555554
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCC-CEEEEEeCCCcEE
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVW 159 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~ 159 (479)
.+|..+|.+++|+++|..+++++.|+.+++||+++|+ ++..+. ....++|+.|+|++ +.|++|+.|+.|+
T Consensus 255 ------~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~--~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~ 325 (503)
T KOG0282|consen 255 ------KGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQ--VLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIR 325 (503)
T ss_pred ------hcchhhhhhhhccccCCeeeeeecceeeeeeccccce--EEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEE
Confidence 6899999999999999999999999999999999997 555655 34578999999988 8999999999999
Q ss_pred EEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE
Q psy14815 160 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
.||++++ +.++.+..|-+.|..+.|-++|+++++.++|+.++||+.+.+-. .......+.....++..+|++++
T Consensus 326 ~wDiRs~---kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~---ik~i~~~~~hsmP~~~~~P~~~~ 399 (503)
T KOG0282|consen 326 QWDIRSG---KVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVP---IKNIADPEMHTMPCLTLHPNGKW 399 (503)
T ss_pred EEeccch---HHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCcc---chhhcchhhccCcceecCCCCCe
Confidence 9999998 67788889999999999999999999999999999999986653 11122334445678999999999
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccc-cccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCC
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 318 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 318 (479)
++.-+.|+.|.++.+...... .....+.+|. .+.-..+.|||||.+|++|+.||.+.+||.++.+
T Consensus 400 ~~aQs~dN~i~ifs~~~~~r~------------nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~k-- 465 (503)
T KOG0282|consen 400 FAAQSMDNYIAIFSTVPPFRL------------NKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTK-- 465 (503)
T ss_pred ehhhccCceEEEEeccccccc------------CHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhh--
Confidence 999999999999997554332 1234566662 3455678999999999999999999999999988
Q ss_pred CCceeeEEEeccccccccceeEEEecCCCCC
Q psy14815 319 SDMVSFDLVHTEHRAHNQDVNCVAWNPVVPE 349 (479)
Q Consensus 319 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 349 (479)
+...++.|.+++..+.|+|..+-
T Consensus 466 --------l~~~lkah~~~ci~v~wHP~e~S 488 (503)
T KOG0282|consen 466 --------LVSKLKAHDQPCIGVDWHPVEPS 488 (503)
T ss_pred --------hhhccccCCcceEEEEecCCCcc
Confidence 66677899999999999998753
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=254.76 Aligned_cols=248 Identities=26% Similarity=0.538 Sum_probs=225.4
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEeccc-ccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVI-REPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
+.+.|+||+++|.+++|+..|++|++++.|-.+++||.++ .++++.+
T Consensus 142 ~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~-------------------------------- 189 (406)
T KOG0295|consen 142 LERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCIKSL-------------------------------- 189 (406)
T ss_pred hhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHHHHHh--------------------------------
Confidence 4678999999999999999999999999998899999875 3333332
Q ss_pred eEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14815 82 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vw 161 (479)
.+|...|.+++|-|.|.++++++.|.+|+.|++.++- ++.++.+|...|..+..+.||.++++++.|.++++|
T Consensus 190 -----~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~--cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW 262 (406)
T KOG0295|consen 190 -----IGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGY--CVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVW 262 (406)
T ss_pred -----cCcccceeeEEEEecCCeeeecccccceeEEecccce--eEEeccCchHhEEEEEecCCeeEEEecCCCceEEEE
Confidence 5789999999999999999999999999999999995 889999999999999999999999999999999999
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecC---------------CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCc
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPF---------------DNILASASYDDTVKLFKEDKAEADWINFATLKSHTS 226 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~---------------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 226 (479)
-+.+. ++...+..|+.+|.|++|.|. +.++++++.|++|++||+.++. ++.++.+|.+
T Consensus 263 ~~~t~---~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~----cL~tL~ghdn 335 (406)
T KOG0295|consen 263 VVATK---QCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGM----CLFTLVGHDN 335 (406)
T ss_pred Eeccc---hhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCe----EEEEEecccc
Confidence 99987 677889999999999999764 2589999999999999999775 5899999999
Q ss_pred cEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCe
Q psy14815 227 TVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDA 306 (479)
Q Consensus 227 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~ 306 (479)
.|..++|+|.|+||+++.+|+++++||++ ...|..++..| ..-++++.|+.+..++++|+-|.+
T Consensus 336 wVr~~af~p~Gkyi~ScaDDktlrvwdl~---------------~~~cmk~~~ah-~hfvt~lDfh~~~p~VvTGsVdqt 399 (406)
T KOG0295|consen 336 WVRGVAFSPGGKYILSCADDKTLRVWDLK---------------NLQCMKTLEAH-EHFVTSLDFHKTAPYVVTGSVDQT 399 (406)
T ss_pred eeeeeEEcCCCeEEEEEecCCcEEEEEec---------------cceeeeccCCC-cceeEEEecCCCCceEEeccccce
Confidence 99999999999999999999999999994 44777888866 778999999999999999999999
Q ss_pred EEEccc
Q psy14815 307 IRIFKE 312 (479)
Q Consensus 307 i~vw~~ 312 (479)
+++|.-
T Consensus 400 ~KvwEc 405 (406)
T KOG0295|consen 400 VKVWEC 405 (406)
T ss_pred eeeeec
Confidence 999964
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-35 Score=237.63 Aligned_cols=268 Identities=18% Similarity=0.230 Sum_probs=223.3
Q ss_pred cceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCC
Q psy14815 55 ETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHE 134 (479)
Q Consensus 55 ~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~ 134 (479)
.-.+++++.|.+|++|...+.... .......+.|..+...|+++.||+++. ..|++||+++++..++.++++|.
T Consensus 10 ~viLvsA~YDhTIRfWqa~tG~C~-----rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~ 83 (311)
T KOG0315|consen 10 PVILVSAGYDHTIRFWQALTGICS-----RTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEGHT 83 (311)
T ss_pred ceEEEeccCcceeeeeehhcCeEE-----EEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCceeEEeccC
Confidence 346778889999999998743221 112345678999999999999999986 68999999999877899999999
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccc
Q psy14815 135 NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEAD 214 (479)
Q Consensus 135 ~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 214 (479)
..|.++.|..+|+.+++|++||+++|||++.. .+. ....|.++|+++..+|+...|++|..+|.|++||+......
T Consensus 84 kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~---~~q-R~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~ 159 (311)
T KOG0315|consen 84 KNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSL---SCQ-RNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCT 159 (311)
T ss_pred CceEEEEEeecCeEEEecCCCceEEEEeccCc---ccc-hhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccc
Confidence 99999999999999999999999999999985 333 34456799999999999999999999999999999865431
Q ss_pred eEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCC
Q psy14815 215 WINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL 294 (479)
Q Consensus 215 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~ 294 (479)
. .........|.++...|||.+++.+...|.+++|++-..... ....++..++.| ...+..+.+||+
T Consensus 160 ~---~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~---------s~l~P~~k~~ah-~~~il~C~lSPd 226 (311)
T KOG0315|consen 160 H---ELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTA---------SELEPVHKFQAH-NGHILRCLLSPD 226 (311)
T ss_pred c---ccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCcc---------ccceEhhheecc-cceEEEEEECCC
Confidence 1 112334578999999999999999999999999998653322 334667788887 889999999999
Q ss_pred CCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 295 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 295 ~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+++|+++|.|.+++||+.+..- .+...+.+|..-++.++||.||+||..++
T Consensus 227 ~k~lat~ssdktv~iwn~~~~~---------kle~~l~gh~rWvWdc~FS~dg~YlvTas 277 (311)
T KOG0315|consen 227 VKYLATCSSDKTVKIWNTDDFF---------KLELVLTGHQRWVWDCAFSADGEYLVTAS 277 (311)
T ss_pred CcEEEeecCCceEEEEecCCce---------eeEEEeecCCceEEeeeeccCccEEEecC
Confidence 9999999999999999988762 14445578999999999999999997775
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=270.24 Aligned_cols=280 Identities=22% Similarity=0.340 Sum_probs=245.2
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
..+++..|+..|.++.|+|...+++++-..|.|.|||.++...++++.
T Consensus 5 ~krk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfe-------------------------------- 52 (794)
T KOG0276|consen 5 FKRKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFE-------------------------------- 52 (794)
T ss_pred hhhHhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeee--------------------------------
Confidence 456788899999999999999999999999999999998888776652
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd 162 (479)
-..-+|.+..|-+..+++++|+.|..|+||+..+++ .+..|+.|.+.|.+++.+|.-.+++++|.|-.|++||
T Consensus 53 -----V~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~e--kV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~ 125 (794)
T KOG0276|consen 53 -----VSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGE--KVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWD 125 (794)
T ss_pred -----ecccchhhheeeeccceEEEecCCceEEEEecccce--eeEEeeccccceeeeeecCCCCeEEecCCccEEEEee
Confidence 245688899999999999999999999999999986 7899999999999999999999999999999999999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC--CE
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG--SR 239 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~ 239 (479)
.+.. +.+.+++.+|..-|.+++|+| |.+.+++++-|++|++|.+.+..+ ..++.+|...|+++.|-+-| .+
T Consensus 126 we~~--wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~----nfTl~gHekGVN~Vdyy~~gdkpy 199 (794)
T KOG0276|consen 126 WENE--WACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHP----NFTLEGHEKGVNCVDYYTGGDKPY 199 (794)
T ss_pred ccCc--eeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCC----ceeeeccccCcceEEeccCCCcce
Confidence 9864 688899999999999999999 668999999999999999997664 77889999999999997644 69
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCC
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS 319 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 319 (479)
|++|++|.+++|||. ++..|++++.|| ...|..+.|+|.-.++++||+||++|+|+..+-+
T Consensus 200 lIsgaDD~tiKvWDy---------------Qtk~CV~TLeGH-t~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~--- 260 (794)
T KOG0276|consen 200 LISGADDLTIKVWDY---------------QTKSCVQTLEGH-TNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYK--- 260 (794)
T ss_pred EEecCCCceEEEeec---------------chHHHHHHhhcc-cccceEEEecCCCcEEEEecCCccEEEecCccee---
Confidence 999999999999998 444788999998 8899999999999999999999999999988865
Q ss_pred CceeeEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 320 DMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 320 ~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
+...+.-.-+.++|++-.+.+..++.+
T Consensus 261 -------lE~tLn~gleRvW~I~~~k~~~~i~vG 287 (794)
T KOG0276|consen 261 -------LEKTLNYGLERVWCIAAHKGDGKIAVG 287 (794)
T ss_pred -------hhhhhhcCCceEEEEeecCCCCeEEEe
Confidence 333333445677777776666655433
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=238.12 Aligned_cols=251 Identities=25% Similarity=0.552 Sum_probs=214.3
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
+|+..|.+++|+|.|++|++||.|.++.||.-..++ +.. ...+.+
T Consensus 59 ~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~e----------------------------------fec-v~~lEG 103 (312)
T KOG0645|consen 59 GHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGE----------------------------------FEC-VATLEG 103 (312)
T ss_pred cchheeeeeeecCCCcEEEEeeccceEEEeecCCCc----------------------------------eeE-Eeeeec
Confidence 799999999999999999999999999999743222 222 223479
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECC-CCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCC
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKR-SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 167 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~ 167 (479)
|...|.|++|+++|.+||+++.|..|.||.+. .+++.+...++.|...|..+.|+|...+|++++.|.+|++|+-....
T Consensus 104 HEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dd 183 (312)
T KOG0645|consen 104 HENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDD 183 (312)
T ss_pred cccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCC
Confidence 99999999999999999999999999999886 35678889999999999999999999999999999999999988777
Q ss_pred ceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCC
Q psy14815 168 EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 247 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 247 (479)
.+.+.+++.+|...|.+++|+|.|..|++++.|++++||-..+.- -..|..+++.+.|. ...|++++.|+
T Consensus 184 dW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~~--------~~~~sr~~Y~v~W~--~~~IaS~ggD~ 253 (312)
T KOG0645|consen 184 DWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTDL--------SGMHSRALYDVPWD--NGVIASGGGDD 253 (312)
T ss_pred CeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccCc--------chhcccceEeeeec--ccceEeccCCC
Confidence 889999999999999999999999999999999999999865321 23478899999998 56899999999
Q ss_pred eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCC-CCeEEEEeCCCeEEEcccC
Q psy14815 248 TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL-TDLIATACGDDAIRIFKEN 313 (479)
Q Consensus 248 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~-~~~l~~~~~dg~i~vw~~~ 313 (479)
.|++|.-.... ..+.+..+....+.|+..|+++.|+|. ..+|++|+.||.|++|.+.
T Consensus 254 ~i~lf~~s~~~---------d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 254 AIRLFKESDSP---------DEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred EEEEEEecCCC---------CCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 99999764221 123445555555556889999999995 6799999999999999864
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-35 Score=250.37 Aligned_cols=281 Identities=19% Similarity=0.287 Sum_probs=229.5
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+.+|..|+++|.+++.+|+.++++||+.|..-.+|++.+++....+
T Consensus 57 ~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~el---------------------------------- 102 (399)
T KOG0296|consen 57 LVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGEL---------------------------------- 102 (399)
T ss_pred eeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEe----------------------------------
Confidence 5789999999999999999999999999999999999887755443
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
.+|+..|+++.|+.+|.+||||+.+|.|+||...++. ....+......+.=+.|+|.+..|+.|+.||.+-+|.+
T Consensus 103 ---tgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~--~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~i 177 (399)
T KOG0296|consen 103 ---TGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGG--EQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQI 177 (399)
T ss_pred ---cCCCCceEEEEEccCceEEEecCCCccEEEEEcccCc--eEEEeecccCceEEEEecccccEEEeecCCCcEEEEEC
Confidence 6899999999999999999999999999999999987 44455455677889999999999999999999999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEee-------------------------
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF------------------------- 218 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~------------------------- 218 (479)
.+. ...+.+.+|..++++=.|.|+|+.++++..||+|++|+..++.+.....
T Consensus 178 p~~---~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e 254 (399)
T KOG0296|consen 178 PSQ---ALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSE 254 (399)
T ss_pred CCc---ceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCC
Confidence 886 5567788999999999999999999999999999999998765321110
Q ss_pred --------------eeec--------CCCccEEEEEEcc---CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceE
Q psy14815 219 --------------ATLK--------SHTSTVWSLAFDR---IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 273 (479)
Q Consensus 219 --------------~~~~--------~~~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 273 (479)
.... .+...+.++.+.| .=...|+|+.||+|.|||+....
T Consensus 255 ~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~--------------- 319 (399)
T KOG0296|consen 255 GVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAAST--------------- 319 (399)
T ss_pred ccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccch---------------
Confidence 0000 1112222333322 23467888999999999984332
Q ss_pred EEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 274 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 274 ~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
++.... |..+|..+.|-+ ..+|++++.||.|+.||.++++ +...+.+|..+|.+++.+|+++++...
T Consensus 320 -~R~~c~-he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~----------l~~~y~GH~~~Il~f~ls~~~~~vvT~ 386 (399)
T KOG0296|consen 320 -LRHICE-HEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQ----------LKFTYTGHQMGILDFALSPQKRLVVTV 386 (399)
T ss_pred -hheecc-CCCceEEEEEcC-cchheeeccCceEEeeeccccc----------eEEEEecCchheeEEEEcCCCcEEEEe
Confidence 223333 377899999998 7899999999999999999998 666678999999999999999988655
Q ss_pred c
Q psy14815 354 N 354 (479)
Q Consensus 354 ~ 354 (479)
+
T Consensus 387 s 387 (399)
T KOG0296|consen 387 S 387 (399)
T ss_pred c
Confidence 4
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-34 Score=251.43 Aligned_cols=271 Identities=26% Similarity=0.434 Sum_probs=230.8
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEeccc---------ccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVI---------REPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
+..|++++|+.+|.+||+|+.||.++||+... ..++..+.....+..+++++.|+++.+||.....
T Consensus 235 nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~----- 309 (524)
T KOG0273|consen 235 NKDVTSLDWNNDGTLLATGSEDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGT----- 309 (524)
T ss_pred cCCcceEEecCCCCeEEEeecCcEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCce-----
Confidence 36799999999999999999999999999642 2234444455678899999999999999986321
Q ss_pred eEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14815 82 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vw 161 (479)
......-|..+-..+.|-. ...+++++.|+.|+|+.+.... ++.++.+|.++|.++.|+|.+.+|++++.|+++++|
T Consensus 310 ~~q~f~~~s~~~lDVdW~~-~~~F~ts~td~~i~V~kv~~~~--P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiW 386 (524)
T KOG0273|consen 310 VKQQFEFHSAPALDVDWQS-NDEFATSSTDGCIHVCKVGEDR--PVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIW 386 (524)
T ss_pred EEEeeeeccCCccceEEec-CceEeecCCCceEEEEEecCCC--cceeeecccCceEEEEECCCCceEEEecCCCeeEee
Confidence 1112234666667888864 4579999999999999997775 778899999999999999999999999999999999
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecCC---------CEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEE
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPFD---------NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLA 232 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~---------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 232 (479)
.+... .+...+..|...|..+.|+|.| ..+++++.|++|++||+..+. ++..+..|+.+|++++
T Consensus 387 s~~~~---~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv----~i~~f~kH~~pVysva 459 (524)
T KOG0273|consen 387 SMGQS---NSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGV----PIHTLMKHQEPVYSVA 459 (524)
T ss_pred ecCCC---cchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCc----eeEeeccCCCceEEEE
Confidence 98877 5667788999999999999965 479999999999999999766 4888999999999999
Q ss_pred EccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 233 FDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 233 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
|+|+|+++++|+.||.|.+|++ +..+..+.+.+ ...|..++|+.+|.+|..+-.|+.+++.|+
T Consensus 460 fS~~g~ylAsGs~dg~V~iws~---------------~~~~l~~s~~~--~~~Ifel~Wn~~G~kl~~~~sd~~vcvldl 522 (524)
T KOG0273|consen 460 FSPNGRYLASGSLDGCVHIWST---------------KTGKLVKSYQG--TGGIFELCWNAAGDKLGACASDGSVCVLDL 522 (524)
T ss_pred ecCCCcEEEecCCCCeeEeccc---------------cchheeEeecC--CCeEEEEEEcCCCCEEEEEecCCCceEEEe
Confidence 9999999999999999999998 44456677776 567999999999999999999999999887
Q ss_pred C
Q psy14815 313 N 313 (479)
Q Consensus 313 ~ 313 (479)
+
T Consensus 523 r 523 (524)
T KOG0273|consen 523 R 523 (524)
T ss_pred c
Confidence 5
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=256.86 Aligned_cols=264 Identities=24% Similarity=0.381 Sum_probs=227.6
Q ss_pred cccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
....|+|+.+. ...+++|..|++|+|||..+.++...+ .+|
T Consensus 196 ~skgVYClQYD--D~kiVSGlrDnTikiWD~n~~~c~~~L-------------------------------------~GH 236 (499)
T KOG0281|consen 196 NSKGVYCLQYD--DEKIVSGLRDNTIKIWDKNSLECLKIL-------------------------------------TGH 236 (499)
T ss_pred cCCceEEEEec--chhhhcccccCceEEeccccHHHHHhh-------------------------------------hcC
Confidence 45789999986 557999999999999998877776655 689
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCce
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 169 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 169 (479)
++.|.|+.|. .+.+++|+.|.+|++||+++++ ++.++-.|...|..+.|+ ..++++++.|.++.+||+......
T Consensus 237 tGSVLCLqyd--~rviisGSSDsTvrvWDv~tge--~l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~i 310 (499)
T KOG0281|consen 237 TGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGE--PLNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDI 310 (499)
T ss_pred CCcEEeeecc--ceEEEecCCCceEEEEeccCCc--hhhHHhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHH
Confidence 9999999996 4699999999999999999997 778888999999999997 468999999999999999998777
Q ss_pred eeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeE
Q psy14815 170 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 249 (479)
Q Consensus 170 ~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i 249 (479)
.+...+.+|...|+.+.|+ .+++++++.|.+|++|++.+.. .++++.+|...|.|+.+. ++++++|+.|.+|
T Consensus 311 t~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~st~e----fvRtl~gHkRGIAClQYr--~rlvVSGSSDntI 382 (499)
T KOG0281|consen 311 TLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYR--DRLVVSGSSDNTI 382 (499)
T ss_pred HHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEecccee----eehhhhcccccceehhcc--CeEEEecCCCceE
Confidence 7778899999999999997 5699999999999999999766 489999999999999886 8999999999999
Q ss_pred EEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEec
Q psy14815 250 KIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHT 329 (479)
Q Consensus 250 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~ 329 (479)
++||+ ..+.|++.++|| +.-|.++.| +.+.+++|+.||+|++||+..+.++......-|+..
T Consensus 383 Rlwdi---------------~~G~cLRvLeGH-EeLvRciRF--d~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~ 444 (499)
T KOG0281|consen 383 RLWDI---------------ECGACLRVLEGH-EELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRT 444 (499)
T ss_pred EEEec---------------cccHHHHHHhch-HHhhhheee--cCceeeeccccceEEEEecccccCCcccccchHHHh
Confidence 99998 555788999998 889999999 567899999999999999999875433333223333
Q ss_pred cccccccceeEEEecC
Q psy14815 330 EHRAHNQDVNCVAWNP 345 (479)
Q Consensus 330 ~~~~h~~~v~~~~~sp 345 (479)
...|.+.|..+.|..
T Consensus 445 -lv~hsgRVFrLQFD~ 459 (499)
T KOG0281|consen 445 -LVEHSGRVFRLQFDE 459 (499)
T ss_pred -hhhccceeEEEeecc
Confidence 357888888888754
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=290.25 Aligned_cols=297 Identities=19% Similarity=0.271 Sum_probs=228.5
Q ss_pred ccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 7 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
+.+|.+.|++++|+|+|++||||+.|++|+|||+......... ...... .
T Consensus 479 ~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~-----------------------------~~~~~~-~ 528 (793)
T PLN00181 479 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRD-----------------------------IHYPVV-E 528 (793)
T ss_pred ccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccc-----------------------------cccceE-E
Confidence 4569999999999999999999999999999997542110000 000000 1
Q ss_pred cccCCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEEeC
Q psy14815 87 DGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVG 164 (479)
Q Consensus 87 ~~~~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vwd~~ 164 (479)
..+...+.+++|++ ++.+|++++.||+|++||+.+++ .+..+.+|...|++++|+| ++.+|++|+.||.|++||++
T Consensus 529 ~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~--~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~ 606 (793)
T PLN00181 529 LASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQ--LVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSIN 606 (793)
T ss_pred ecccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCe--EEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECC
Confidence 12346899999987 57899999999999999999886 5678889999999999997 78999999999999999998
Q ss_pred CCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 165 EEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 165 ~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
+. .....+..+ ..+.++.|++ ++.+|++|+.||.|++||++.... ....+.+|...|.++.|. ++.+|+++
T Consensus 607 ~~---~~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~---~~~~~~~h~~~V~~v~f~-~~~~lvs~ 678 (793)
T PLN00181 607 QG---VSIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKL---PLCTMIGHSKTVSYVRFV-DSSTLVSS 678 (793)
T ss_pred CC---cEEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCc---cceEecCCCCCEEEEEEe-CCCEEEEE
Confidence 87 344444443 5789999954 789999999999999999986542 345677899999999997 67899999
Q ss_pred eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCcee
Q psy14815 244 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVS 323 (479)
Q Consensus 244 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 323 (479)
+.|++|++||++..... ..+.++..+.+| ...+..++|+|++.+|++|+.|+.|++|+........ ...
T Consensus 679 s~D~~ikiWd~~~~~~~---------~~~~~l~~~~gh-~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~-s~~ 747 (793)
T PLN00181 679 STDNTLKLWDLSMSISG---------INETPLHSFMGH-TNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVL-SYK 747 (793)
T ss_pred ECCCEEEEEeCCCCccc---------cCCcceEEEcCC-CCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceE-EEe
Confidence 99999999998653211 123457788887 7789999999999999999999999999976543100 000
Q ss_pred eE----EEeccccccccceeEEEecCCCCCCCccc
Q psy14815 324 FD----LVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 324 ~~----~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+. ........|...|.+++|+|++..|+.+.
T Consensus 748 ~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~ 782 (793)
T PLN00181 748 FKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAAN 782 (793)
T ss_pred cccCCcccccccCCCCcEEEEEEEcCCCCeEEEec
Confidence 00 00011134567899999999999886654
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-34 Score=233.42 Aligned_cols=290 Identities=19% Similarity=0.303 Sum_probs=235.8
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEE
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAI 84 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~ 84 (479)
-.|+||..+++.+.++.+|.+|++|+.|.+..+|-..+|+.+.++
T Consensus 4 i~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty----------------------------------- 48 (327)
T KOG0643|consen 4 ILLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTY----------------------------------- 48 (327)
T ss_pred cccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeee-----------------------------------
Confidence 357899999999999999999999999999999988788877665
Q ss_pred eccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-----CcEE
Q psy14815 85 LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVW 159 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~ 159 (479)
.+|.+.|+|++.+.+.+.+++|+.|.++++||+++|+ ++..++ ...+|..+.|+++|++++....+ +.|.
T Consensus 49 --~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk--~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~ 123 (327)
T KOG0643|consen 49 --DGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGK--QLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVS 123 (327)
T ss_pred --cCCCceEEEEEecCCcceeeeccccceeEEEEcCCCc--EEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEE
Confidence 6899999999999999999999999999999999998 555555 45789999999999988777553 5799
Q ss_pred EEEeCCCC----ceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEcc
Q psy14815 160 VWEVGEED----EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR 235 (479)
Q Consensus 160 vwd~~~~~----~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 235 (479)
++|++... ...+...+..+.+.++..-|.|-+++|++|.+||.|..||.+++.. .+.+...|...|+.+++++
T Consensus 124 ~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~---~v~s~~~h~~~Ind~q~s~ 200 (327)
T KOG0643|consen 124 VFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKE---LVDSDEEHSSKINDLQFSR 200 (327)
T ss_pred EEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCce---eeechhhhccccccccccC
Confidence 99998543 2244566777889999999999999999999999999999998763 5667788999999999999
Q ss_pred CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCC
Q psy14815 236 IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 236 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
+..++++++.|.+-++||. .+..++.++.. ..||++.+++|....++.|+.....-|=-...+
T Consensus 201 d~T~FiT~s~Dttakl~D~---------------~tl~v~Kty~t--e~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r 263 (327)
T KOG0643|consen 201 DRTYFITGSKDTTAKLVDV---------------RTLEVLKTYTT--ERPVNTAAISPLLDHVILGGGQEAMDVTTTSTR 263 (327)
T ss_pred CcceEEecccCccceeeec---------------cceeeEEEeee--cccccceecccccceEEecCCceeeeeeeeccc
Confidence 9999999999999999998 44466777775 679999999998888777765433333322222
Q ss_pred CCCCCceeeEE----EeccccccccceeEEEecCCCCCCCccc
Q psy14815 316 AGDSDMVSFDL----VHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 316 ~~~~~~~~~~~----~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.+..+..-+.. .....++|-+||++++|+|+|+.-++++
T Consensus 264 ~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGG 306 (327)
T KOG0643|consen 264 AGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGG 306 (327)
T ss_pred ccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCC
Confidence 22222221111 1122478999999999999999887775
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=231.98 Aligned_cols=277 Identities=24% Similarity=0.408 Sum_probs=232.0
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEE
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAI 84 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~ 84 (479)
+.+++|.+.|.+++|+.+|..|++|+.|+++++|+++........
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~----------------------------------- 58 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKEL----------------------------------- 58 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhh-----------------------------------
Confidence 567899999999999999999999999999999998766433322
Q ss_pred eccccCCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 85 LSDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
...+|.+.|-.++|+| ....+++++.|.+|++||.++++ +........+. .-+.|+|+|.++++++.|..|.+.|.
T Consensus 59 ~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k--~~~~i~~~~en-i~i~wsp~g~~~~~~~kdD~it~id~ 135 (313)
T KOG1407|consen 59 VYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGK--CTARIETKGEN-INITWSPDGEYIAVGNKDDRITFIDA 135 (313)
T ss_pred cccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCc--EEEEeeccCcc-eEEEEcCCCCEEEEecCcccEEEEEe
Confidence 1368999999999998 56899999999999999999997 45555544444 46789999999999999999999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
++.+. .... .....+..++|+.++++++.....|+|.|...... +++.++++|.....|+.|+|+|++|++|
T Consensus 136 r~~~~---~~~~-~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsL----kpv~si~AH~snCicI~f~p~GryfA~G 207 (313)
T KOG1407|consen 136 RTYKI---VNEE-QFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSL----KPVQSIKAHPSNCICIEFDPDGRYFATG 207 (313)
T ss_pred cccce---eehh-cccceeeeeeecCCCCEEEEecCCceEEEEecccc----ccccccccCCcceEEEEECCCCceEeec
Confidence 98632 2221 22345778899987888888778899999988844 4589999999999999999999999999
Q ss_pred eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCcee
Q psy14815 244 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVS 323 (479)
Q Consensus 244 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 323 (479)
+.|..+-+||+.. ..|++.+..+ .-+|..++|+.+|++||+||+|..|-|=+++++.
T Consensus 208 sADAlvSLWD~~E---------------LiC~R~isRl-dwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd------- 264 (313)
T KOG1407|consen 208 SADALVSLWDVDE---------------LICERCISRL-DWPVRTLSFSHDGRMLASASEDHFIDIAEVETGD------- 264 (313)
T ss_pred cccceeeccChhH---------------hhhheeeccc-cCceEEEEeccCcceeeccCccceEEeEecccCC-------
Confidence 9999999999833 3566777776 8899999999999999999999999999999997
Q ss_pred eEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 324 FDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 324 ~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.+..+ .+.++...++|+|....||.+.
T Consensus 265 --~~~eI--~~~~~t~tVAWHPk~~LLAyA~ 291 (313)
T KOG1407|consen 265 --RVWEI--PCEGPTFTVAWHPKRPLLAYAC 291 (313)
T ss_pred --eEEEe--eccCCceeEEecCCCceeeEEe
Confidence 34444 5788999999999999997654
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=250.61 Aligned_cols=282 Identities=20% Similarity=0.396 Sum_probs=225.1
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
..++|..|++.|+-+.||++|++|||++.|.+..||.+.....+ + .
T Consensus 216 t~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~---------------------k-------------l 261 (519)
T KOG0293|consen 216 TWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHF---------------------K-------------L 261 (519)
T ss_pred hhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcce---------------------e-------------e
Confidence 45788999999999999999999999999999999987432221 1 1
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe-CCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE-GHENEVKSVTWSKNGQFLATCSRDKSVWVW 161 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~~dg~i~vw 161 (479)
.....+|..+|..+.||||.++|++|+.|..+.+||+.+|.. ...++ ++...+.+++|.|||..+++|+.|+.+..|
T Consensus 262 ~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~--~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~w 339 (519)
T KOG0293|consen 262 KKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDL--RHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMW 339 (519)
T ss_pred eeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchh--hhhcccCcCCCcceeEEccCCceeEecCCCCcEEEe
Confidence 122368999999999999999999999999999999999973 33332 356889999999999999999999999999
Q ss_pred EeCCCCceeeeeeeecc-ccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEE
Q psy14815 162 EVGEEDEYECAAVINAH-IQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 240 (479)
|+.... .....+- ...|.+++..+||+++++.+.|..|++|+...... ..+.....+|++++.|.+++++
T Consensus 340 dlDgn~----~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~d-----r~lise~~~its~~iS~d~k~~ 410 (519)
T KOG0293|consen 340 DLDGNI----LGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVD-----RGLISEEQPITSFSISKDGKLA 410 (519)
T ss_pred cCCcch----hhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhh-----hccccccCceeEEEEcCCCcEE
Confidence 998752 1111111 24589999999999999999999999999886443 2233455789999999999999
Q ss_pred EEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccc-ccEEEEEec-CCCCeEEEEeCCCeEEEcccCCCCCC
Q psy14815 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG-RTIYDISWC-HLTDLIATACGDDAIRIFKENPEAGD 318 (479)
Q Consensus 241 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~l~~~-~~~~~l~~~~~dg~i~vw~~~~~~~~ 318 (479)
++.-.+..+++||+... +.++.+.||.. .-+..-+|. .+..++++||+|+.|+||+..+++
T Consensus 411 LvnL~~qei~LWDl~e~---------------~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgk-- 473 (519)
T KOG0293|consen 411 LVNLQDQEIHLWDLEEN---------------KLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGK-- 473 (519)
T ss_pred EEEcccCeeEEeecchh---------------hHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCc--
Confidence 99999999999999533 44566666622 223333454 356899999999999999999998
Q ss_pred CCceeeEEEeccccccccceeEEEecCCCCCC-Cccc
Q psy14815 319 SDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP-QKTN 354 (479)
Q Consensus 319 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l-~~~~ 354 (479)
+...+.||...|++++|+|..+.+ |+++
T Consensus 474 --------ll~~LsGHs~~vNcVswNP~~p~m~ASas 502 (519)
T KOG0293|consen 474 --------LLAVLSGHSKTVNCVSWNPADPEMFASAS 502 (519)
T ss_pred --------eeEeecCCcceeeEEecCCCCHHHhhccC
Confidence 666678999999999999988754 4443
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-34 Score=268.51 Aligned_cols=283 Identities=24% Similarity=0.400 Sum_probs=245.1
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEE
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAI 84 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~ 84 (479)
..|...+..|..++|+|...+++++-..|.|++||..-+..+..|
T Consensus 3 tkfEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rF----------------------------------- 47 (1202)
T KOG0292|consen 3 TKFESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRF----------------------------------- 47 (1202)
T ss_pred chhhcccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhh-----------------------------------
Confidence 456667889999999999999999999999999999887777766
Q ss_pred eccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeC
Q psy14815 85 LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 164 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~ 164 (479)
..|.++|..++|+|++.++++|+.|-.|++|+..+.+ ++.++.+|-+.|..+.|++.-.+++++|.|.+|+||+..
T Consensus 48 --deHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rr--clftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwq 123 (1202)
T KOG0292|consen 48 --DEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRR--CLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQ 123 (1202)
T ss_pred --hccCCccceeeecCCCCeEEecCCccEEEEEecccce--ehhhhccccceeEEeeccCCCceEEEccCCCeEEEEecc
Confidence 6899999999999999999999999999999999886 889999999999999999999999999999999999999
Q ss_pred CCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCccc-------------------------ceEeee
Q psy14815 165 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA-------------------------DWINFA 219 (479)
Q Consensus 165 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~-------------------------~~~~~~ 219 (479)
+. .++..+++|...|.|..|+|....+++++-|.+||+||+..-.. +-....
T Consensus 124 sr---~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~ 200 (1202)
T KOG0292|consen 124 SR---KCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKH 200 (1202)
T ss_pred CC---ceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeee
Confidence 98 78899999999999999999999999999999999999853210 112234
Q ss_pred eecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEE
Q psy14815 220 TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA 299 (479)
Q Consensus 220 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~ 299 (479)
.+.+|...|+-++|+|.-..+++|++|..|++|.+...+ .| .+-+.++| ...|.++-|+|...+++
T Consensus 201 VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetK------------aW-EvDtcrgH-~nnVssvlfhp~q~lIl 266 (1202)
T KOG0292|consen 201 VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETK------------AW-EVDTCRGH-YNNVSSVLFHPHQDLIL 266 (1202)
T ss_pred eecccccccceEEecCCcceEEecCCcceeeEEEecccc------------ce-eehhhhcc-cCCcceEEecCccceeE
Confidence 567899999999999999999999999999999985432 22 24677887 88999999999999999
Q ss_pred EEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 300 TACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 300 ~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
+.|+|++|+|||+..+. .+.++ +.....-+.++-+|....++.+
T Consensus 267 SnsEDksirVwDm~kRt---------~v~tf-rrendRFW~laahP~lNLfAAg 310 (1202)
T KOG0292|consen 267 SNSEDKSIRVWDMTKRT---------SVQTF-RRENDRFWILAAHPELNLFAAG 310 (1202)
T ss_pred ecCCCccEEEEeccccc---------ceeee-eccCCeEEEEEecCCcceeeee
Confidence 99999999999999887 23333 3344567888888888777544
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-34 Score=264.06 Aligned_cols=289 Identities=25% Similarity=0.418 Sum_probs=244.6
Q ss_pred cccccccccccceEEEEEC-CCCCeEEEeeCCCcEEEEecccccccccccCC----------CccceEEEeecCCcEEEe
Q psy14815 2 INSQTLKGHQGRVWNVSWN-PQGTMISSCGEDKNIRLWVMVIREPYEKLHGL----------PVETSLRQLVEDKNIRLW 70 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s-~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~~i~~w 70 (479)
...+.+-|..+.|.+|+|- |+.++||.+++.+.+|+|++.+..+. .+.+| ..+..+++++.|+++++|
T Consensus 314 ~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~-ii~GH~e~vlSL~~~~~g~llat~sKD~svilW 392 (775)
T KOG0319|consen 314 TIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQ-IIPGHTEAVLSLDVWSSGDLLATGSKDKSVILW 392 (775)
T ss_pred EEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceE-EEeCchhheeeeeecccCcEEEEecCCceEEEE
Confidence 3566777899999999985 67889999999999999988765543 33333 334578899999999999
Q ss_pred cCCCCCCceeeeEEeccccCCcEEEEEECCCC-CEEEEEECCCeEEEEECCCCe-------EEEeEEEeCCCCcEEEEEE
Q psy14815 71 GKESFGNKFTAKAILSDGHQRTIRETAWSPCG-NFIASASFDATTAVWDKRSGQ-------FECNATLEGHENEVKSVTW 142 (479)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~-~~l~t~~~dg~i~iwd~~~~~-------~~~~~~~~~~~~~v~~l~~ 142 (479)
.++..... ........+|...|.+++++..+ .+|++++.|+++++|++...+ ..+......|...|+|++.
T Consensus 393 r~~~~~~~-~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vai 471 (775)
T KOG0319|consen 393 RLNNNCSK-SLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAI 471 (775)
T ss_pred EecCCcch-hhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEe
Confidence 88532222 22223347999999999998754 789999999999999997622 1111234579999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeec
Q psy14815 143 SKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLK 222 (479)
Q Consensus 143 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 222 (479)
+|+.++++|||.|++.++|++... .....+.+|...|.|+.|+|..+.+++++.|++|+||.+.+. .++.++.
T Consensus 472 a~ndkLiAT~SqDktaKiW~le~~---~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~f----SClkT~e 544 (775)
T KOG0319|consen 472 APNDKLIATGSQDKTAKIWDLEQL---RLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTF----SCLKTFE 544 (775)
T ss_pred cCCCceEEecccccceeeecccCc---eEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccc----eeeeeec
Confidence 999999999999999999999965 788899999999999999999999999999999999999954 4699999
Q ss_pred CCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe
Q psy14815 223 SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 223 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~ 302 (479)
+|...|..+.|-.+++.|++++.||-|++|++ ++..|++++..| ...|++++-+|.+..+++|+
T Consensus 545 GH~~aVlra~F~~~~~qliS~~adGliKlWni---------------kt~eC~~tlD~H-~DrvWaL~~~~~~~~~~tgg 608 (775)
T KOG0319|consen 545 GHTSAVLRASFIRNGKQLISAGADGLIKLWNI---------------KTNECEMTLDAH-NDRVWALSVSPLLDMFVTGG 608 (775)
T ss_pred CccceeEeeeeeeCCcEEEeccCCCcEEEEec---------------cchhhhhhhhhc-cceeEEEeecCccceeEecC
Confidence 99999999999999999999999999999998 455788999998 88999999999999999999
Q ss_pred CCCeEEEcccCCC
Q psy14815 303 GDDAIRIFKENPE 315 (479)
Q Consensus 303 ~dg~i~vw~~~~~ 315 (479)
.||.|.+|.=.+.
T Consensus 609 ~Dg~i~~wkD~Te 621 (775)
T KOG0319|consen 609 GDGRIIFWKDVTE 621 (775)
T ss_pred CCeEEEEeecCcH
Confidence 9999999975544
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-34 Score=242.26 Aligned_cols=292 Identities=24% Similarity=0.353 Sum_probs=238.9
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCC
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~ 165 (479)
..+|.+.|.|+++.|...+|++|+.|++|+|||+.+++ ...++.+|...|..+++|+...++++++.|+.|+.||+..
T Consensus 147 i~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~--LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~ 224 (460)
T KOG0285|consen 147 ISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQ--LKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEY 224 (460)
T ss_pred hhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCe--EEEeecchhheeeeeeecccCceEEEecCCCeeEEEechh
Confidence 47999999999999999999999999999999999997 6688999999999999999999999999999999999998
Q ss_pred CCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeC
Q psy14815 166 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 245 (479)
Q Consensus 166 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 245 (479)
. +.++.+.+|-+.|.|++.+|.-+.|++|+.|.++++||+++... +..+.+|..+|.++.+.|-...+++|+.
T Consensus 225 n---kvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~----V~~l~GH~~~V~~V~~~~~dpqvit~S~ 297 (460)
T KOG0285|consen 225 N---KVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRAS----VHVLSGHTNPVASVMCQPTDPQVITGSH 297 (460)
T ss_pred h---hhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccce----EEEecCCCCcceeEEeecCCCceEEecC
Confidence 8 67788899999999999999999999999999999999997664 8899999999999999998999999999
Q ss_pred CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeE
Q psy14815 246 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFD 325 (479)
Q Consensus 246 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~ 325 (479)
|++|++||++.+ +...++..| ...+.+++.+|....+|+++.| .|+-|++..+.
T Consensus 298 D~tvrlWDl~ag---------------kt~~tlt~h-kksvral~lhP~e~~fASas~d-nik~w~~p~g~--------- 351 (460)
T KOG0285|consen 298 DSTVRLWDLRAG---------------KTMITLTHH-KKSVRALCLHPKENLFASASPD-NIKQWKLPEGE--------- 351 (460)
T ss_pred CceEEEeeeccC---------------ceeEeeecc-cceeeEEecCCchhhhhccCCc-cceeccCCccc---------
Confidence 999999999655 446677766 8899999999999999999877 78999999987
Q ss_pred EEeccccccccceeEEEecCCCCCCCcc---cccH-----HHHHHHHHHh-CCC-------ccCCCCCcceeeeccCCCc
Q psy14815 326 LVHTEHRAHNQDVNCVAWNPVVPEPQKT---NLTL-----HDVVRRLEAM-APL-------SLAEPWDNVGLLIEPHNTT 389 (479)
Q Consensus 326 ~~~~~~~~h~~~v~~~~~sp~~~~l~~~---~~~~-----~~~~~~l~~~-~p~-------~~a~~wd~~Gl~v~~~~~~ 389 (479)
.+.. +.+|+.-|++++...|+-++.-+ .+.. ..-.+..+.. .|- .++..+|..|+.+-+.+..
T Consensus 352 f~~n-lsgh~~iintl~~nsD~v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~ead 430 (460)
T KOG0285|consen 352 FLQN-LSGHNAIINTLSVNSDGVLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEAD 430 (460)
T ss_pred hhhc-cccccceeeeeeeccCceEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCC
Confidence 3444 68999999999999998777322 1111 1112222211 121 1345678888777666545
Q ss_pred CcccEEEEEecCCHHHHHHHHHcCCCEEEEeCCCCcccc
Q psy14815 390 KHIKNIMLTIDLTDEVLKEAVENGTDLIIAYHPPIFAPL 428 (479)
Q Consensus 390 ~~v~~il~~~d~t~~~~~~a~~~~~~~i~~~h~~~~~~~ 428 (479)
+.++-.----++|+| -||+-|+|.
T Consensus 431 KtIk~~keDe~aT~E---------------thPl~w~P~ 454 (460)
T KOG0285|consen 431 KTIKMYKEDEHATEE---------------THPLNWKPE 454 (460)
T ss_pred cceEEEecccccCcc---------------cCCcCCCCc
Confidence 555544333333333 489999984
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-33 Score=268.88 Aligned_cols=252 Identities=29% Similarity=0.548 Sum_probs=215.1
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecc-cccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMV-IREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
+++++.+|...|++++|+|+++++++++.|++|+|||++ .+..++.+
T Consensus 195 ~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l-------------------------------- 242 (456)
T KOG0266|consen 195 LLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTL-------------------------------- 242 (456)
T ss_pred hhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEe--------------------------------
Confidence 467788999999999999999999999999999999983 33433333
Q ss_pred eEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14815 82 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vw 161 (479)
.+|...|++++|+|+++++++|+.|++|+|||+++++ +...+.+|.+.|++++|++++++|++++.|+.|++|
T Consensus 243 -----~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~--~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vw 315 (456)
T KOG0266|consen 243 -----KGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGE--CVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVW 315 (456)
T ss_pred -----cCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCe--EEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEE
Confidence 5899999999999999999999999999999999986 789999999999999999999999999999999999
Q ss_pred EeCCCCceeeeeeeecccc--ceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCcc---EEEEEEccC
Q psy14815 162 EVGEEDEYECAAVINAHIQ--DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST---VWSLAFDRI 236 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~--~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~---v~~~~~~~~ 236 (479)
|+.++... +...+..+.. ++++++|+|++.++++++.|+.+++||++.+.. .....+|... +.+..+++.
T Consensus 316 d~~~~~~~-~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 390 (456)
T KOG0266|consen 316 DLETGSKL-CLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKS----VGTYTGHSNLVRCIFSPTLSTG 390 (456)
T ss_pred ECCCCcee-eeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcc----eeeecccCCcceeEecccccCC
Confidence 99998421 3445555544 499999999999999999999999999997664 5666777664 445556788
Q ss_pred CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe--CCCeEEEcccC
Q psy14815 237 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC--GDDAIRIFKEN 313 (479)
Q Consensus 237 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~--~dg~i~vw~~~ 313 (479)
+.++++|+.|+.|++||+... ..+..+.+|....+..+.++|...++++++ .|+.+++|..+
T Consensus 391 ~~~i~sg~~d~~v~~~~~~s~---------------~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 391 GKLIYSGSEDGSVYVWDSSSG---------------GILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred CCeEEEEeCCceEEEEeCCcc---------------chhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence 999999999999999998543 345666675467889999999999999998 78999999764
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-32 Score=228.30 Aligned_cols=286 Identities=15% Similarity=0.278 Sum_probs=229.9
Q ss_pred CcccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 1 ~~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
|++.+.|+.-.+.|+++.|+++|.++++++.|.+++|||..++.+.+++.
T Consensus 4 ~~~ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~------------------------------ 53 (311)
T KOG1446|consen 4 FRPAKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTIN------------------------------ 53 (311)
T ss_pred cccccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEee------------------------------
Confidence 56778888888999999999999999999999999999999888877662
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEEEC--CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcE
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASASF--DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 158 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i 158 (479)
.+.-.+..++|......++.++. |.+|+..++.+++ .++-+.+|...|.+++.+|-+..+++++.|++|
T Consensus 54 -------skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNk--ylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tv 124 (311)
T KOG1446|consen 54 -------SKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNK--YLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTV 124 (311)
T ss_pred -------cccccccEEEEecCCceEEEccCCCCCceEEEEeecCc--eEEEcCCCCceEEEEEecCCCCeEEecccCCeE
Confidence 34456677777666666666665 8899999999997 778999999999999999988999999999999
Q ss_pred EEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeec-CCCccEEEEEEccCC
Q psy14815 159 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLK-SHTSTVWSLAFDRIG 237 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~ 237 (479)
++||++..+ +...+... .-...+|+|+|-++|++.....|++||++.-...+.....+. +-....+.+.|+|+|
T Consensus 125 rLWDlR~~~---cqg~l~~~--~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dG 199 (311)
T KOG1446|consen 125 RLWDLRVKK---CQGLLNLS--GRPIAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDG 199 (311)
T ss_pred EeeEecCCC---CceEEecC--CCcceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCC
Confidence 999999763 33333322 234588999999999999888999999998754333333333 456788999999999
Q ss_pred CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccc--cccEEEEEecCCCCeEEEEeCCCeEEEcccCCC
Q psy14815 238 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH--GRTIYDISWCHLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 238 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
++++.++..+.+++.|...+. .+.++.++. ..--.+.+|.||++++++|+.||+|.+|+++++
T Consensus 200 K~iLlsT~~s~~~~lDAf~G~---------------~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg 264 (311)
T KOG1446|consen 200 KSILLSTNASFIYLLDAFDGT---------------VKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETG 264 (311)
T ss_pred CEEEEEeCCCcEEEEEccCCc---------------EeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCC
Confidence 999999999999999986553 344554431 112257789999999999999999999999998
Q ss_pred CCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 316 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+ .+......+.+++.++.|+|....++++.
T Consensus 265 ~---------~v~~~~~~~~~~~~~~~fnP~~~mf~sa~ 294 (311)
T KOG1446|consen 265 K---------KVAVLRGPNGGPVSCVRFNPRYAMFVSAS 294 (311)
T ss_pred c---------EeeEecCCCCCCccccccCCceeeeeecC
Confidence 7 34444333789999999999988876664
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-33 Score=258.58 Aligned_cols=280 Identities=20% Similarity=0.298 Sum_probs=242.6
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC--------CccceEEEeecCCcEEEecCCCCC
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL--------PVETSLRQLVEDKNIRLWGKESFG 76 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~--------~~~~~~~~~~~~~~i~~w~~~~~~ 76 (479)
-++.||...|.++++|.+...+++|+ .+.++||+..+.+++.++... |.+..++.+...|.+.++|+.+..
T Consensus 367 i~~~GHR~dVRsl~vS~d~~~~~Sga-~~SikiWn~~t~kciRTi~~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~ 445 (888)
T KOG0306|consen 367 IEIGGHRSDVRSLCVSSDSILLASGA-GESIKIWNRDTLKCIRTITCGYILASKFVPGDRYIVLGTKNGELQVFDLASAS 445 (888)
T ss_pred eeeccchhheeEEEeecCceeeeecC-CCcEEEEEccCcceeEEeccccEEEEEecCCCceEEEeccCCceEEEEeehhh
Confidence 35679999999999999988888886 558999999999999888653 778889999999999999988533
Q ss_pred CceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCC-----CeEEEe------EEEeCCCCcEEEEEEcCC
Q psy14815 77 NKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS-----GQFECN------ATLEGHENEVKSVTWSKN 145 (479)
Q Consensus 77 ~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~-----~~~~~~------~~~~~~~~~v~~l~~~~~ 145 (479)
... ....|.+.|+.++.+||+..+++|+.|.+|++||..- +..... .+++ -...|.|+.+|||
T Consensus 446 l~E-----ti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLe-l~ddvL~v~~Spd 519 (888)
T KOG0306|consen 446 LVE-----TIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLE-LEDDVLCVSVSPD 519 (888)
T ss_pred hhh-----hhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEe-ccccEEEEEEcCC
Confidence 221 1258999999999999999999999999999999642 111111 2222 3568999999999
Q ss_pred CCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCC
Q psy14815 146 GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT 225 (479)
Q Consensus 146 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 225 (479)
+++|+++--|.+|++|-+.+. +....+.+|.-||.|+..+|+++.+++|+.|..|++|-++-+.. -+++.+|.
T Consensus 520 gk~LaVsLLdnTVkVyflDtl---KFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDC----HKS~fAHd 592 (888)
T KOG0306|consen 520 GKLLAVSLLDNTVKVYFLDTL---KFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDC----HKSFFAHD 592 (888)
T ss_pred CcEEEEEeccCeEEEEEecce---eeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchh----hhhhhccc
Confidence 999999999999999999987 67778899999999999999999999999999999999997774 67889999
Q ss_pred ccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCC
Q psy14815 226 STVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD 305 (479)
Q Consensus 226 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg 305 (479)
..|.++.|-|....+++++.|+.|+-||- ..+..++.+.+| ...|++++.+|+|.+++++|.|.
T Consensus 593 DSvm~V~F~P~~~~FFt~gKD~kvKqWDg---------------~kFe~iq~L~~H-~~ev~cLav~~~G~~vvs~shD~ 656 (888)
T KOG0306|consen 593 DSVMSVQFLPKTHLFFTCGKDGKVKQWDG---------------EKFEEIQKLDGH-HSEVWCLAVSPNGSFVVSSSHDK 656 (888)
T ss_pred CceeEEEEcccceeEEEecCcceEEeech---------------hhhhhheeeccc-hheeeeeEEcCCCCeEEeccCCc
Confidence 99999999999999999999999999996 445678899998 67999999999999999999999
Q ss_pred eEEEcccCC
Q psy14815 306 AIRIFKENP 314 (479)
Q Consensus 306 ~i~vw~~~~ 314 (479)
+|++|....
T Consensus 657 sIRlwE~td 665 (888)
T KOG0306|consen 657 SIRLWERTD 665 (888)
T ss_pred eeEeeeccC
Confidence 999998765
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=254.86 Aligned_cols=235 Identities=22% Similarity=0.316 Sum_probs=194.0
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEE------------------------------------
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNAT------------------------------------ 129 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~------------------------------------ 129 (479)
..+|...|.++++|.+...+++|+ .+.+++|+..+.+ ++++
T Consensus 369 ~~GHR~dVRsl~vS~d~~~~~Sga-~~SikiWn~~t~k--ciRTi~~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~ 445 (888)
T KOG0306|consen 369 IGGHRSDVRSLCVSSDSILLASGA-GESIKIWNRDTLK--CIRTITCGYILASKFVPGDRYIVLGTKNGELQVFDLASAS 445 (888)
T ss_pred eccchhheeEEEeecCceeeeecC-CCcEEEEEccCcc--eeEEeccccEEEEEecCCCceEEEeccCCceEEEEeehhh
Confidence 357888999999998887777776 4789999987654 2222
Q ss_pred ----EeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc-----eeee-----eeeeccccceeEEEEecCCCEEE
Q psy14815 130 ----LEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE-----YECA-----AVINAHIQDVKKVRFHPFDNILA 195 (479)
Q Consensus 130 ----~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~-----~~~~-----~~~~~~~~~v~~l~~~~~~~~l~ 195 (479)
.++|.+.+.+++.+||+..+++|+.|.+|++||..-... .+.+ .++ .-...|.|+++|||+++|+
T Consensus 446 l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtL-el~ddvL~v~~Spdgk~La 524 (888)
T KOG0306|consen 446 LVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTL-ELEDDVLCVSVSPDGKLLA 524 (888)
T ss_pred hhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEE-eccccEEEEEEcCCCcEEE
Confidence 237899999999999999999999999999999753211 0100 111 2345799999999999999
Q ss_pred EEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEE
Q psy14815 196 SASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 275 (479)
Q Consensus 196 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 275 (479)
++--|.+|++|-+++.+ ...++.+|.-+|.|+..+||++.++|||.|.+|++|-+.-+ .|-
T Consensus 525 VsLLdnTVkVyflDtlK----FflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFG---------------DCH 585 (888)
T KOG0306|consen 525 VSLLDNTVKVYFLDTLK----FFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFG---------------DCH 585 (888)
T ss_pred EEeccCeEEEEEeccee----eeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccc---------------hhh
Confidence 99999999999999654 47788999999999999999999999999999999987433 566
Q ss_pred EEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 276 CTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 276 ~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
..+-+| ...|.++.|.|....+.+++.|+.|+-||-...+ ..+.+.+|...|+|++.+|+|.++.+++
T Consensus 586 KS~fAH-dDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe----------~iq~L~~H~~ev~cLav~~~G~~vvs~s 653 (888)
T KOG0306|consen 586 KSFFAH-DDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFE----------EIQKLDGHHSEVWCLAVSPNGSFVVSSS 653 (888)
T ss_pred hhhhcc-cCceeEEEEcccceeEEEecCcceEEeechhhhh----------hheeeccchheeeeeEEcCCCCeEEecc
Confidence 777776 8899999999999999999999999999988776 4445579999999999999999986553
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=237.22 Aligned_cols=279 Identities=24% Similarity=0.421 Sum_probs=228.0
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC-------------CccceEEEeecCCcEEEecCCCC
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL-------------PVETSLRQLVEDKNIRLWGKESF 75 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~i~~w~~~~~ 75 (479)
-|.+.|.++... +++|+||++||.+++||.. |+....+.++ +....+++++.|.++++|..+..
T Consensus 103 ~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~-Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~ 179 (423)
T KOG0313|consen 103 LHDDWVSSVKGA--SKWILTGSYDGTSRIWDLK-GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVG 179 (423)
T ss_pred cchhhhhhhccc--CceEEEeecCCeeEEEecC-CceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCc
Confidence 388899998887 7899999999999999974 4444444443 22335889999999999998864
Q ss_pred CCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCC-----------------------CeEEEeEEEeC
Q psy14815 76 GNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS-----------------------GQFECNATLEG 132 (479)
Q Consensus 76 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~-----------------------~~~~~~~~~~~ 132 (479)
......... ..||...|-+++..+++..+++|+.|.+|.||+..+ +...++..+.+
T Consensus 180 ~~~~~~~~~-~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~G 258 (423)
T KOG0313|consen 180 ENKVKALKV-CRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEG 258 (423)
T ss_pred hhhhhHHhH-hcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecc
Confidence 443332222 249999999999999999999999999999999321 11235677899
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcc
Q psy14815 133 HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 212 (479)
Q Consensus 133 ~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~ 212 (479)
|..+|.++.|++ ...+++++.|.+|+.||+.++. ....+.+ ...+.|+.++|..++|++|+.|..+++||.+++.
T Consensus 259 Ht~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~---~~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~ 333 (423)
T KOG0313|consen 259 HTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGG---LKSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGD 333 (423)
T ss_pred cccceeeEEEcC-CCceEeecccceEEEEEeeccc---ceeeeec-CcceeEeecccccceeeecCCCCceeecCCCCCC
Confidence 999999999997 6789999999999999999984 3334433 4568999999999999999999999999999886
Q ss_pred cceEeeeeecCCCccEEEEEEccCCC-EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEe
Q psy14815 213 ADWINFATLKSHTSTVWSLAFDRIGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW 291 (479)
Q Consensus 213 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 291 (479)
. .....++.+|.+.|.++.|+|... +|++++.|+++++||++... .++..+.+| ...|.++.|
T Consensus 334 g-s~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k--------------~plydI~~h-~DKvl~vdW 397 (423)
T KOG0313|consen 334 G-SVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTK--------------APLYDIAGH-NDKVLSVDW 397 (423)
T ss_pred C-ceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCC--------------CcceeeccC-CceEEEEec
Confidence 3 355678899999999999999764 57899999999999997654 347788887 889999999
Q ss_pred cCCCCeEEEEeCCCeEEEcccC
Q psy14815 292 CHLTDLIATACGDDAIRIFKEN 313 (479)
Q Consensus 292 ~~~~~~l~~~~~dg~i~vw~~~ 313 (479)
+. +.++++|+.|.+|+++.-.
T Consensus 398 ~~-~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 398 NE-GGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred cC-CceEEeccCcceEEEeccc
Confidence 75 5589999999999998654
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-32 Score=234.01 Aligned_cols=281 Identities=19% Similarity=0.246 Sum_probs=232.9
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccc----------cCCCccceEEEeecCCcEEEecCC
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKL----------HGLPVETSLRQLVEDKNIRLWGKE 73 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~----------~~~~~~~~~~~~~~~~~i~~w~~~ 73 (479)
+-.+.||++.|+|+.||.||.+||||+.+|.|+||...++....++ ..||....+++++.||.+-.|.+.
T Consensus 99 ~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip 178 (399)
T KOG0296|consen 99 AGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIP 178 (399)
T ss_pred eeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECC
Confidence 3467899999999999999999999999999999999988776655 347888999999999999999988
Q ss_pred CCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC-CCCcEEEEEEcCCCCEEEEE
Q psy14815 74 SFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG-HENEVKSVTWSKNGQFLATC 152 (479)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~~~ 152 (479)
+. .....+.+|..++++=.|.|+|++++++..||+|++||+.++++ ...+.. ......++.++..+..++.|
T Consensus 179 ~~-----~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p--~~~~~~~e~~~~~~~~~~~~~~~~~~g 251 (399)
T KOG0296|consen 179 SQ-----ALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQP--LHKITQAEGLELPCISLNLAGSTLTKG 251 (399)
T ss_pred Cc-----ceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCce--eEEecccccCcCCccccccccceeEec
Confidence 42 33444579999999999999999999999999999999999974 444432 23467889999999999999
Q ss_pred eCCCcEEEEEeCCCCceeeee-----eeeccccceeEEEEec---CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCC
Q psy14815 153 SRDKSVWVWEVGEEDEYECAA-----VINAHIQDVKKVRFHP---FDNILASASYDDTVKLFKEDKAEADWINFATLKSH 224 (479)
Q Consensus 153 ~~dg~i~vwd~~~~~~~~~~~-----~~~~~~~~v~~l~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 224 (479)
+.++.+++-+..+++...+.. ....+...+.|+.+.| .-.+.|+|+-||+|.|||+.... ++..-.|
T Consensus 252 ~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~-----~R~~c~h 326 (399)
T KOG0296|consen 252 NSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAAST-----LRHICEH 326 (399)
T ss_pred cCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccch-----hheeccC
Confidence 999999988887764322221 1113444555666555 44788999999999999998655 3445568
Q ss_pred CccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC
Q psy14815 225 TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 304 (479)
Q Consensus 225 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d 304 (479)
..+|+.+.|-+ ..+|++++.+|.|+.||.+ ++.++.++.+| ..+|.+++++|+.++++++|.|
T Consensus 327 e~~V~~l~w~~-t~~l~t~c~~g~v~~wDaR---------------tG~l~~~y~GH-~~~Il~f~ls~~~~~vvT~s~D 389 (399)
T KOG0296|consen 327 EDGVTKLKWLN-TDYLLTACANGKVRQWDAR---------------TGQLKFTYTGH-QMGILDFALSPQKRLVVTVSDD 389 (399)
T ss_pred CCceEEEEEcC-cchheeeccCceEEeeecc---------------ccceEEEEecC-chheeEEEEcCCCcEEEEecCC
Confidence 89999999998 7899999999999999984 44778999998 8899999999999999999999
Q ss_pred CeEEEcccC
Q psy14815 305 DAIRIFKEN 313 (479)
Q Consensus 305 g~i~vw~~~ 313 (479)
++.+||+..
T Consensus 390 ~~a~VF~v~ 398 (399)
T KOG0296|consen 390 NTALVFEVP 398 (399)
T ss_pred CeEEEEecC
Confidence 999999864
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=244.31 Aligned_cols=252 Identities=23% Similarity=0.426 Sum_probs=216.7
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
.+++.|.||++.|.|+.|. .+.|++||.|.+|++||+++++++.++
T Consensus 228 ~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~tl-------------------------------- 273 (499)
T KOG0281|consen 228 ECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLNTL-------------------------------- 273 (499)
T ss_pred HHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchhhHH--------------------------------
Confidence 3578899999999999996 569999999999999999999998876
Q ss_pred eEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCe-EEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 82 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ-FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
.+|...|..+.|+ ..++++++.|.++.+||+.+.. ......+.+|...|..+.|+ .+++++++.|.+|++
T Consensus 274 -----ihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikv 344 (499)
T KOG0281|consen 274 -----IHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKV 344 (499)
T ss_pred -----hhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEE
Confidence 5789999999997 4599999999999999997653 12335677899999999995 569999999999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEE
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 240 (479)
|++.+. +++.++.+|...|-|+.+. ++++++|+.|.+|++||+..+.. ++.+++|..-|.++.|+ .+.+
T Consensus 345 W~~st~---efvRtl~gHkRGIAClQYr--~rlvVSGSSDntIRlwdi~~G~c----LRvLeGHEeLvRciRFd--~krI 413 (499)
T KOG0281|consen 345 WSTSTC---EFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGAC----LRVLEGHEELVRCIRFD--NKRI 413 (499)
T ss_pred Eeccce---eeehhhhcccccceehhcc--CeEEEecCCCceEEEEeccccHH----HHHHhchHHhhhheeec--Ccee
Confidence 999998 8889999999999999886 89999999999999999998774 88899999999999996 6789
Q ss_pred EEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 241 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
++|+.||+|++||+.....+.... ..-|+.++..| .+.|..+.| |...+++++.|.+|-+||+..+.
T Consensus 414 VSGaYDGkikvWdl~aaldpra~~------~~~Cl~~lv~h-sgRVFrLQF--D~fqIvsssHddtILiWdFl~~~ 480 (499)
T KOG0281|consen 414 VSGAYDGKIKVWDLQAALDPRAPA------STLCLRTLVEH-SGRVFRLQF--DEFQIISSSHDDTILIWDFLNGP 480 (499)
T ss_pred eeccccceEEEEecccccCCcccc------cchHHHhhhhc-cceeEEEee--cceEEEeccCCCeEEEEEcCCCC
Confidence 999999999999997765543211 12355666665 778999999 45678999999999999998765
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=260.30 Aligned_cols=287 Identities=19% Similarity=0.318 Sum_probs=205.0
Q ss_pred ccccc-ccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCc---------c--------c-e-------
Q psy14815 4 SQTLK-GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPV---------E--------T-S------- 57 (479)
Q Consensus 4 ~~~l~-~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~---------~--------~-~------- 57 (479)
.+.++ .|.+.|++|.||+||+|||+||.||.|+||.+...+....-..... . . .
T Consensus 259 ~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~ 338 (712)
T KOG0283|consen 259 VQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSS 338 (712)
T ss_pred eeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccc
Confidence 45566 8999999999999999999999999999998865332111000000 0 0 0
Q ss_pred EEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcE
Q psy14815 58 LRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEV 137 (479)
Q Consensus 58 ~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v 137 (479)
.-....... .+.....+. -...+...+.+|...|..+.||.++ +|++++.|.+|++|++...+ ++..|. |.+.|
T Consensus 339 ~~~~~~s~~-~~~p~~~f~-f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~--CL~~F~-HndfV 412 (712)
T KOG0283|consen 339 SRKGSQSPC-VLLPLKAFV-FSEKPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRKE--CLKVFS-HNDFV 412 (712)
T ss_pred cccccCCcc-ccCCCcccc-ccccchhhhhccchhheecccccCC-eeEeccccccEEeecCCCcc--eeeEEe-cCCee
Confidence 000000011 111111000 0011222357999999999999764 99999999999999999876 666665 99999
Q ss_pred EEEEEcC-CCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceE
Q psy14815 138 KSVTWSK-NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 216 (479)
Q Consensus 138 ~~l~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 216 (479)
+|++|+| |.++|++|+-||.||+|++... +.. ....-..-|++++|.|+|+..++|+.+|.+++|+....+....
T Consensus 413 TcVaFnPvDDryFiSGSLD~KvRiWsI~d~---~Vv-~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~ 488 (712)
T KOG0283|consen 413 TCVAFNPVDDRYFISGSLDGKVRLWSISDK---KVV-DWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSD 488 (712)
T ss_pred EEEEecccCCCcEeecccccceEEeecCcC---eeE-eehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEe
Confidence 9999999 8899999999999999999886 322 3333447799999999999999999999999999986543111
Q ss_pred eeeee-----cCCCccEEEEEEccCC-CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccc-cccEEEE
Q psy14815 217 NFATL-----KSHTSTVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-GRTIYDI 289 (479)
Q Consensus 217 ~~~~~-----~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~l 289 (479)
....+ ..|. .|+.+.|.|.. ..+++.+.|..|||||.+.. .++..++|.+ ...-...
T Consensus 489 ~~I~~~~~Kk~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~---------------~lv~KfKG~~n~~SQ~~A 552 (712)
T KOG0283|consen 489 FHIRLHNKKKKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDK---------------DLVHKFKGFRNTSSQISA 552 (712)
T ss_pred eeEeeccCccccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccch---------------hhhhhhcccccCCcceee
Confidence 11111 1133 79999998744 35777889999999998544 3345566542 2334567
Q ss_pred EecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 290 SWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 290 ~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
.|+.||++|+++++|..|++|+.....
T Consensus 553 sfs~Dgk~IVs~seDs~VYiW~~~~~~ 579 (712)
T KOG0283|consen 553 SFSSDGKHIVSASEDSWVYIWKNDSFN 579 (712)
T ss_pred eEccCCCEEEEeecCceEEEEeCCCCc
Confidence 899999999999999999999986543
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=244.89 Aligned_cols=348 Identities=17% Similarity=0.199 Sum_probs=261.0
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEE
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAI 84 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~ 84 (479)
-.|++|+..|+++++.|.|-.|+|||.|.+|++||+..... .......
T Consensus 161 i~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMda--------------------------------s~~~fr~ 208 (641)
T KOG0772|consen 161 IQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDA--------------------------------SMRSFRQ 208 (641)
T ss_pred EeccCCceEEEEeeecCCCceeeeccccceEEEEecccccc--------------------------------cchhhhc
Confidence 36889999999999999999999999999999999753221 0011112
Q ss_pred eccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEE----------EeEEEeCCCCcEEEEEEcCCC-CEEEEEe
Q psy14815 85 LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE----------CNATLEGHENEVKSVTWSKNG-QFLATCS 153 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~----------~~~~~~~~~~~v~~l~~~~~~-~~l~~~~ 153 (479)
+.......|.+++|++.|..|++.+.....+|+|-...... -...-++|...++|.+|+|+. ..|++++
T Consensus 209 l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s 288 (641)
T KOG0772|consen 209 LQPCETHQINSLQYSVTGDQILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCS 288 (641)
T ss_pred cCcccccccceeeecCCCCeEEEEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEec
Confidence 22455678999999999999999888899999996544311 112336788999999999954 5799999
Q ss_pred CCCcEEEEEeCCCCceee-eeee--eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCc--cE
Q psy14815 154 RDKSVWVWEVGEEDEYEC-AAVI--NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTS--TV 228 (479)
Q Consensus 154 ~dg~i~vwd~~~~~~~~~-~~~~--~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~--~v 228 (479)
.||++|+||+...+.... +... .+..-+++.++|+|++++||+|+.||.|.+|+..+..... ....-.+|.. .|
T Consensus 289 ~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p-~~~vk~AH~~g~~I 367 (641)
T KOG0772|consen 289 YDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRP-VMKVKDAHLPGQDI 367 (641)
T ss_pred CCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCccccc-ceEeeeccCCCCce
Confidence 999999999987653222 2111 1334468899999999999999999999999986544321 2334456776 89
Q ss_pred EEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc-ccccEEEEEecCCCCeEEEEeC----
Q psy14815 229 WSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGRTIYDISWCHLTDLIATACG---- 303 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~---- 303 (479)
+|+.||++|++|++-+.|+++++||++...++. ....+- ...+-+.++|||+.++|++|..
T Consensus 368 tsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL--------------~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~ 433 (641)
T KOG0772|consen 368 TSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPL--------------NVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNG 433 (641)
T ss_pred eEEEeccccchhhhccCCCceeeeeccccccch--------------hhhcCCCccCCCCccccCCCceEEEecccccCC
Confidence 999999999999999999999999998776542 222221 2345678999999999999854
Q ss_pred --CCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcccccHHHHHHHHHHhCCCccCCCCCccee
Q psy14815 304 --DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTNLTLHDVVRRLEAMAPLSLAEPWDNVGL 381 (479)
Q Consensus 304 --dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~~~~~~~~~l~~~~p~~~a~~wd~~Gl 381 (479)
.|.+.+||..+-+ .+..+. .....|..+.|+|.-..+..+. -| |.
T Consensus 434 ~~~g~L~f~d~~t~d---------~v~ki~-i~~aSvv~~~WhpkLNQi~~gs---------------------gd--G~ 480 (641)
T KOG0772|consen 434 MTAGTLFFFDRMTLD---------TVYKID-ISTASVVRCLWHPKLNQIFAGS---------------------GD--GT 480 (641)
T ss_pred CCCceEEEEecccee---------eEEEec-CCCceEEEEeecchhhheeeec---------------------CC--Cc
Confidence 4789999988765 455553 3477888999999865543332 12 32
Q ss_pred eeccCCCcCcccEEEEEecCCHHHHHHHHHcCCCEEEEeCCC-CcccccccC
Q psy14815 382 LIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIAYHPP-IFAPLKRVT 432 (479)
Q Consensus 382 ~v~~~~~~~~v~~il~~~d~t~~~~~~a~~~~~~~i~~~h~~-~~~~~~~~~ 432 (479)
.-...++.+.++++.+|+--++..-..+.....++||+.|.| +|+..++.+
T Consensus 481 ~~vyYdp~~S~RGak~cv~k~~rkk~~~e~~~~~~ii~phalpmfre~~~rt 532 (641)
T KOG0772|consen 481 AHVYYDPNESIRGAKLCVVKPPRKKHIDEDLSEDVIINPHALPMFREEKSRT 532 (641)
T ss_pred eEEEECccccccchhheeecCccccchhhhcCcceEEccccchhccCchhhh
Confidence 222345568999999999999999999999999999998865 566555554
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-32 Score=226.95 Aligned_cols=250 Identities=21% Similarity=0.373 Sum_probs=216.0
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
..+++||+++|..+.|.+|++.|+++|.|.+|+.||+++|+.+.++
T Consensus 83 ~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~---------------------------------- 128 (338)
T KOG0265|consen 83 FWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKH---------------------------------- 128 (338)
T ss_pred eeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehh----------------------------------
Confidence 4568899999999999999999999999999999999999988776
Q ss_pred EeccccCCcEEEEEECCCC-CEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy14815 84 ILSDGHQRTIRETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd 162 (479)
.+|.+-|+.+.-+.-| .++.+++.|+++++||+++.. .+.++. ...+++++.|..++..+++|+-|+.|++||
T Consensus 129 ---k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~--~~~t~~-~kyqltAv~f~d~s~qv~sggIdn~ikvWd 202 (338)
T KOG0265|consen 129 ---KGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKE--AIKTFE-NKYQLTAVGFKDTSDQVISGGIDNDIKVWD 202 (338)
T ss_pred ---ccccceeeecCccccCCeEEEecCCCceEEEEeecccc--hhhccc-cceeEEEEEecccccceeeccccCceeeec
Confidence 5788888888854444 567788899999999999875 455554 356799999999999999999999999999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCc----cEEEEEEccCCC
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTS----TVWSLAFDRIGS 238 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~ 238 (479)
++.. .....+.+|..+|+.+..+|+|.++.+-+.|.++++||++...+..+++..+.+|.. ....++|+|+++
T Consensus 203 ~r~~---d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~ 279 (338)
T KOG0265|consen 203 LRKN---DGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGT 279 (338)
T ss_pred cccC---cceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCC
Confidence 9987 677889999999999999999999999999999999999976655555666666543 346789999999
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
.+.+|+.|..+++||. ....++..+.|| ...|+++.|+|...+|.+++.|.+|++=++
T Consensus 280 ~i~ags~dr~vyvwd~---------------~~r~~lyklpGh-~gsvn~~~Fhp~e~iils~~sdk~i~lgei 337 (338)
T KOG0265|consen 280 KITAGSADRFVYVWDT---------------TSRRILYKLPGH-YGSVNEVDFHPTEPIILSCSSDKTIYLGEI 337 (338)
T ss_pred ccccccccceEEEeec---------------ccccEEEEcCCc-ceeEEEeeecCCCcEEEEeccCceeEeecc
Confidence 9999999999999997 233667888897 889999999999999999999999987543
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-31 Score=251.62 Aligned_cols=283 Identities=17% Similarity=0.242 Sum_probs=214.1
Q ss_pred cccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
|-..|.....++++..+++++.+.....|+...+..+ +.+...+..... .....+|
T Consensus 19 ~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v-----------------------~~~~~~G~~~~~-~~~l~GH 74 (493)
T PTZ00421 19 HFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAV-----------------------LKHTDYGKLASN-PPILLGQ 74 (493)
T ss_pred ceeccccccccCCCCCcEeECCceEEEEEecCCceEE-----------------------eeccccccCCCC-CceEeCC
Confidence 4456777777888888888988888889986433211 111111111111 1223689
Q ss_pred CCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeE-----EEeEEEeCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEE
Q psy14815 90 QRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQF-----ECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWE 162 (479)
Q Consensus 90 ~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~vwd 162 (479)
.+.|.+++|+| ++++|++|+.|++|++||+.++.. ..+..+.+|...|.+++|+|++ ++|++|+.|+.|++||
T Consensus 75 ~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWD 154 (493)
T PTZ00421 75 EGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWD 154 (493)
T ss_pred CCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEE
Confidence 99999999999 889999999999999999976531 2456788999999999999975 6999999999999999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCcc-EEEEEEccCCCEEE
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST-VWSLAFDRIGSRLA 241 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~ 241 (479)
++++ .....+..|...|.+++|+|++++|++++.|+.|++||++++.. +..+.+|.+. +..+.|.+++..++
T Consensus 155 l~tg---~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~----v~tl~~H~~~~~~~~~w~~~~~~iv 227 (493)
T PTZ00421 155 VERG---KAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTI----VSSVEAHASAKSQRCLWAKRKDLII 227 (493)
T ss_pred CCCC---eEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcE----EEEEecCCCCcceEEEEcCCCCeEE
Confidence 9987 45667788999999999999999999999999999999997653 5667778764 45678999888887
Q ss_pred Eee----CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe-CCCeEEEcccCCCC
Q psy14815 242 TCS----DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIFKENPEA 316 (479)
Q Consensus 242 s~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~-~dg~i~vw~~~~~~ 316 (479)
+++ .|+.|++||++..... ......+....+....|++++.+|++++ .|+.|++||+..++
T Consensus 228 t~G~s~s~Dr~VklWDlr~~~~p--------------~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~ 293 (493)
T PTZ00421 228 TLGCSKSQQRQIMLWDTRKMASP--------------YSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNER 293 (493)
T ss_pred EEecCCCCCCeEEEEeCCCCCCc--------------eeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCc
Confidence 654 4789999998754322 2233333344566778999999998887 59999999998876
Q ss_pred CCCCceeeEEEeccccccccceeEEEecCC
Q psy14815 317 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPV 346 (479)
Q Consensus 317 ~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 346 (479)
+.......+..++..++|.|.
T Consensus 294 ---------~~~~~~~~s~~~~~g~~~~pk 314 (493)
T PTZ00421 294 ---------LTFCSSYSSVEPHKGLCMMPK 314 (493)
T ss_pred ---------eEEEeeccCCCCCcceEeccc
Confidence 232222345567778888874
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-32 Score=227.48 Aligned_cols=283 Identities=24% Similarity=0.417 Sum_probs=242.4
Q ss_pred CcccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 1 ~~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
|.+++.|.||.+.|+.++.....+.+.|++.|.+.+||.++++.++..+
T Consensus 138 ~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y------------------------------- 186 (481)
T KOG0300|consen 138 FRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATY------------------------------- 186 (481)
T ss_pred EeehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeee-------------------------------
Confidence 3567889999999999999888889999999999999999999988776
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEEC------CCC-------------------------------e
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDK------RSG-------------------------------Q 123 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~------~~~-------------------------------~ 123 (479)
.+|.+.|++++|++.+.++++++.|++..||.. .+. .
T Consensus 187 ------~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~t 260 (481)
T KOG0300|consen 187 ------TGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHT 260 (481)
T ss_pred ------cccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCce
Confidence 689999999999999999999999999999962 110 0
Q ss_pred -EEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCc
Q psy14815 124 -FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT 202 (479)
Q Consensus 124 -~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~ 202 (479)
..++..+.+|...|.+..|...|+.+++++.|.+..+||++++ ..+..+.+|....+.++-+|..+++++++.|.+
T Consensus 261 iRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtg---e~v~~LtGHd~ELtHcstHptQrLVvTsSrDtT 337 (481)
T KOG0300|consen 261 IRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETG---EVVNILTGHDSELTHCSTHPTQRLVVTSSRDTT 337 (481)
T ss_pred eeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccC---ceeccccCcchhccccccCCcceEEEEeccCce
Confidence 2355678899999999999999999999999999999999998 778889999999999999999999999999999
Q ss_pred EEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccc
Q psy14815 203 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH 282 (479)
Q Consensus 203 i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (479)
.++||++..- ..+..+++|...|+++.|..+. .+++|++|.+|++||+++...+ +.+++.
T Consensus 338 FRLWDFReaI---~sV~VFQGHtdtVTS~vF~~dd-~vVSgSDDrTvKvWdLrNMRsp--------------lATIRt-- 397 (481)
T KOG0300|consen 338 FRLWDFREAI---QSVAVFQGHTDTVTSVVFNTDD-RVVSGSDDRTVKVWDLRNMRSP--------------LATIRT-- 397 (481)
T ss_pred eEeccchhhc---ceeeeecccccceeEEEEecCC-ceeecCCCceEEEeeeccccCc--------------ceeeec--
Confidence 9999999543 3577889999999999998754 6789999999999999765433 555654
Q ss_pred cccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCC
Q psy14815 283 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPE 349 (479)
Q Consensus 283 ~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 349 (479)
..+++.++.+..++.|+.-..+..|++||++...- ..+.+..-++|...|.|++|..+-+.
T Consensus 398 dS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~Rl------aRlPrtsRqgHrRMV~c~AW~eehp~ 458 (481)
T KOG0300|consen 398 DSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRL------ARLPRTSRQGHRRMVTCCAWLEEHPA 458 (481)
T ss_pred CCccceeEeecCCceEEeccCCceEEEEecCCCcc------ccCCcccccccceeeeeeeccccCcc
Confidence 67899999999999999999999999999987650 01122334689999999999987653
|
|
| >TIGR00486 YbgI_SA1388 dinuclear metal center protein, YbgI/SA1388 family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-34 Score=249.86 Aligned_cols=120 Identities=32% Similarity=0.530 Sum_probs=113.9
Q ss_pred ccHHHHHHHHHHhCCCccCCCCCcceeeeccCCCcCcccEEEEEecCCHHHHHHHHHcCCCEEEEeCCCCcccccccCcC
Q psy14815 355 LTLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIAYHPPIFAPLKRVTND 434 (479)
Q Consensus 355 ~~~~~~~~~l~~~~p~~~a~~wd~~Gl~v~~~~~~~~v~~il~~~d~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~ 434 (479)
|++.+++..+++++|+.++++|||+|||++..+ ++|+++++|+|+|++++++|++++||+||+|||+||+|+|++..+
T Consensus 1 M~~~~i~~~le~~~p~~~a~~wDn~Gl~vg~~~--~~v~~I~~alD~t~~vi~~Ai~~~~dlIitHHP~~f~~~~~~~~~ 78 (249)
T TIGR00486 1 MNLDELIQLINRFLPKELAEDGDNNGLQVGSGN--EEVKKVVVAVDASESVADEAVRLGADLIITHHPLIWKPLKRLIRG 78 (249)
T ss_pred CcHHHHHHHHHHhCCHHHhcCCCCCeeEecCCC--cccCEEEEEecCCHHHHHHHHHCCCCEEEEcCccccCCcccccCC
Confidence 457899999999999999999999999997554 899999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHhcCceEEeccccccccCCCccccCCCcCCCCC
Q psy14815 435 KWKERVVSTCLAHNIAVYSPHTTWDAIQEGRTKKAPPEVQVPA 477 (479)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~h~~~d~~~~g~~~~~~~~~~~~~ 477 (479)
.++++ +.+|++|||+|||+|||||++++|+|++||++||+..
T Consensus 79 ~~~~~-~~~li~~~I~vy~~Ht~lD~~~~G~n~~La~~Lgl~~ 120 (249)
T TIGR00486 79 IKPGR-LKILLQNDISLYSAHTNLDAHDGGNNDALARALGLEN 120 (249)
T ss_pred CHHHH-HHHHHHCCCeEEEeecchhcCCCCHHHHHHHHcCCCc
Confidence 99888 9999999999999999999999999999999999863
|
The characterization of this family of uncharacterized proteins as orthologous is tentative. Members are found in all three domains of life. Several members (from Bacillus subtilis, Listeria monocytogenes, and Mycobacterium tuberculosis - all classified as Firmicutes within the Eubacteria) share a long insert relative to other members. |
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=230.97 Aligned_cols=282 Identities=20% Similarity=0.256 Sum_probs=237.0
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
|...-+.|..|||||++|++|+.||-|.+||..+|+..+.+.... .. .+--
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQA----------------------------qd-~fMM 261 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQA----------------------------QD-NFMM 261 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhh----------------------------hc-ceee
Confidence 556778999999999999999999999999999888765542111 00 0124
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe-CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCC
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE-GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 167 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~ 167 (479)
+..+|.|+.|+.|...+++|+.||.|++|.+++|+ +++.|. .|...|+|+.|+.|+..+++++.|.++++.-+.++
T Consensus 262 md~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~--ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSG- 338 (508)
T KOG0275|consen 262 MDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQ--CLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSG- 338 (508)
T ss_pred cccceEEEeecccHHHhhccCcCCcEEEEEEecch--HHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccc-
Confidence 67899999999999999999999999999999997 777776 89999999999999999999999999999999998
Q ss_pred ceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeec--CCCccEEEEEEccC-CCEEEEee
Q psy14815 168 EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLK--SHTSTVWSLAFDRI-GSRLATCS 244 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~-~~~l~s~~ 244 (479)
+++..+.+|.+.|+...|.++|..+++++.||+|++|+..+.+. +.+++ +...+|.++..-|. ..+++.|.
T Consensus 339 --K~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC----~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCN 412 (508)
T KOG0275|consen 339 --KCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTEC----LSTFKPLGTDYPVNSVILLPKNPEHFIVCN 412 (508)
T ss_pred --hhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCcchhh----hhhccCCCCcccceeEEEcCCCCceEEEEc
Confidence 77888999999999999999999999999999999999987664 44443 34567888877764 46888999
Q ss_pred CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc--ccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCce
Q psy14815 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH--HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMV 322 (479)
Q Consensus 245 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 322 (479)
..++|.|.++. +..++++... .++...+.+.+|.|.++.+.++|+.++.|.+.+++
T Consensus 413 rsntv~imn~q----------------GQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~------ 470 (508)
T KOG0275|consen 413 RSNTVYIMNMQ----------------GQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGK------ 470 (508)
T ss_pred CCCeEEEEecc----------------ceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCc------
Confidence 99999999872 2344555432 34566778899999999999999999999999998
Q ss_pred eeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 323 SFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 323 ~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+...+..|...|-.++-+|....||+-+
T Consensus 471 ----LE~tl~VhEkdvIGl~HHPHqNllAsYs 498 (508)
T KOG0275|consen 471 ----LERTLPVHEKDVIGLTHHPHQNLLASYS 498 (508)
T ss_pred ----eeeeeecccccccccccCcccchhhhhc
Confidence 6666678999999999999998887654
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-30 Score=237.33 Aligned_cols=246 Identities=36% Similarity=0.626 Sum_probs=211.3
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
...+.+|...+.++.|+|++++|++++.||.|++||+.+++....+
T Consensus 44 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~---------------------------------- 89 (289)
T cd00200 44 LRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTL---------------------------------- 89 (289)
T ss_pred EEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEE----------------------------------
Confidence 4567889999999999999999999999999999998765433322
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
..|...+.++.|++++.++++++.++.+.+||+.+++ ....+..|...+.++.|+|++.++++++.+|.+++||+
T Consensus 90 ---~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~ 164 (289)
T cd00200 90 ---TGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGK--CLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDL 164 (289)
T ss_pred ---eccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcE--EEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEc
Confidence 3577799999999998889988889999999999775 55667788899999999999898888888999999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
+.. +....+..|...+.++.|+|+++.+++++.++.|++||++.+. ....+..|...+.++.|+|++.+++++
T Consensus 165 ~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~~~~ 237 (289)
T cd00200 165 RTG---KCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGK----CLGTLRGHENGVNSVAFSPDGYLLASG 237 (289)
T ss_pred ccc---ccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCc----eecchhhcCCceEEEEEcCCCcEEEEE
Confidence 876 4455666888899999999999999999999999999998654 356666788899999999998888888
Q ss_pred eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcc
Q psy14815 244 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 244 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~ 311 (479)
+.||.|++||+... .....+..| ...|.+++|+|++++|++++.||.+++|+
T Consensus 238 ~~~~~i~i~~~~~~---------------~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 238 SEDGTIRVWDLRTG---------------ECVQTLSGH-TNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred cCCCcEEEEEcCCc---------------eeEEEcccc-CCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 88999999998432 445666665 77899999999999999999999999996
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=244.14 Aligned_cols=251 Identities=22% Similarity=0.352 Sum_probs=213.0
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
.++++|.||..+|.+++|+++|..++|+|.|+.+++||+++|+++..+.
T Consensus 249 ~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~------------------------------- 297 (503)
T KOG0282|consen 249 RCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFH------------------------------- 297 (503)
T ss_pred ceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEe-------------------------------
Confidence 3689999999999999999999999999999999999999999887762
Q ss_pred eEEeccccCCcEEEEEECCCC-CEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 82 KAILSDGHQRTIRETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
....++|+.|+|++ +.+++|+.|+.|+.||+++++ .++.+..|-+.|..+.|-++|+++++.+.|+++++
T Consensus 298 -------~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~k--vvqeYd~hLg~i~~i~F~~~g~rFissSDdks~ri 368 (503)
T KOG0282|consen 298 -------LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGK--VVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRI 368 (503)
T ss_pred -------cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchH--HHHHHHhhhhheeeeEEccCCceEeeeccCccEEE
Confidence 35678999999988 889999999999999999997 67788889999999999999999999999999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCC--ccEEEEEEccCCC
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT--STVWSLAFDRIGS 238 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~ 238 (479)
|+.+.+-..+.+... +.....++..+|+++++++=+.|..|.+|.+...-. ......+.+|. +.-..+.|||||.
T Consensus 369 We~~~~v~ik~i~~~--~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r-~nkkK~feGh~vaGys~~v~fSpDG~ 445 (503)
T KOG0282|consen 369 WENRIPVPIKNIADP--EMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFR-LNKKKRFEGHSVAGYSCQVDFSPDGR 445 (503)
T ss_pred EEcCCCccchhhcch--hhccCcceecCCCCCeehhhccCceEEEEecccccc-cCHhhhhcceeccCceeeEEEcCCCC
Confidence 999987544433333 334567899999999999999999999998764321 11233455664 4456789999999
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCC-CeEEEEeCCCeEEEcc
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIFK 311 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~-~~l~~~~~dg~i~vw~ 311 (479)
+|++|+.||.+.+||.+.. +.+..++.| ..++..+.|+|.. ..+|+++.||.|++|+
T Consensus 446 ~l~SGdsdG~v~~wdwkt~---------------kl~~~lkah-~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 446 TLCSGDSDGKVNFWDWKTT---------------KLVSKLKAH-DQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred eEEeecCCccEEEeechhh---------------hhhhccccC-CcceEEEEecCCCcceeEecccCceeEecC
Confidence 9999999999999998443 556777777 8899999999964 4799999999999996
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-31 Score=249.91 Aligned_cols=253 Identities=25% Similarity=0.418 Sum_probs=216.6
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
++..|..|.++|..++|+|++.++++||+|..|++|+..+.+++.++
T Consensus 43 li~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL--------------------------------- 89 (1202)
T KOG0292|consen 43 LIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTL--------------------------------- 89 (1202)
T ss_pred HHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhh---------------------------------
Confidence 56778899999999999999999999999999999999888877665
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd 162 (479)
.+|-+-|..+.|++.-.+++++|.|.+|+||+..+++ ++..+.+|+..|.|..|+|....++++|.|.+||+||
T Consensus 90 ----~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~--~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWD 163 (1202)
T KOG0292|consen 90 ----LGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRK--CIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWD 163 (1202)
T ss_pred ----ccccceeEEeeccCCCceEEEccCCCeEEEEeccCCc--eEEEEecCceEEEeeccCCccceEEEecccceEEEEe
Confidence 6899999999999999999999999999999999997 8889999999999999999999999999999999999
Q ss_pred eCCCCc--------------------------eeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceE
Q psy14815 163 VGEEDE--------------------------YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 216 (479)
Q Consensus 163 ~~~~~~--------------------------~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 216 (479)
+...+. ......+.+|...|+.++|+|.-.++++|+.|+.|++|.+...+. |
T Consensus 164 isGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKa-W- 241 (1202)
T KOG0292|consen 164 ISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKA-W- 241 (1202)
T ss_pred ecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccc-e-
Confidence 864211 112345678999999999999999999999999999999876552 3
Q ss_pred eeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC
Q psy14815 217 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 296 (479)
Q Consensus 217 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~ 296 (479)
.+-+..+|.+.|.++.|+|..+.+++.|+|++|++||+.+. +.+.+++.. ....+.++-+|..+
T Consensus 242 EvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kR---------------t~v~tfrre-ndRFW~laahP~lN 305 (1202)
T KOG0292|consen 242 EVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKR---------------TSVQTFRRE-NDRFWILAAHPELN 305 (1202)
T ss_pred eehhhhcccCCcceEEecCccceeEecCCCccEEEEecccc---------------cceeeeecc-CCeEEEEEecCCcc
Confidence 25677899999999999999999999999999999999544 445666554 56788888888887
Q ss_pred eEEEEeCCCeEEEcccC
Q psy14815 297 LIATACGDDAIRIFKEN 313 (479)
Q Consensus 297 ~l~~~~~dg~i~vw~~~ 313 (479)
+++.|. |+-+.||.++
T Consensus 306 LfAAgH-DsGm~VFkle 321 (1202)
T KOG0292|consen 306 LFAAGH-DSGMIVFKLE 321 (1202)
T ss_pred eeeeec-CCceEEEEEc
Confidence 777654 4444566655
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-31 Score=243.01 Aligned_cols=244 Identities=23% Similarity=0.329 Sum_probs=211.9
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
.++++.--.-+|.+..|-+..+++++|++|..||||+..+++.+..|
T Consensus 47 mVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV~~F--------------------------------- 93 (794)
T KOG0276|consen 47 MVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKVKTF--------------------------------- 93 (794)
T ss_pred eeeeeeecccchhhheeeeccceEEEecCCceEEEEecccceeeEEe---------------------------------
Confidence 45666667788999999999999999999999999999988877766
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVW 161 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vw 161 (479)
..|.+-|.|++.+|..++++|++.|-+|++||.+.+ +.+.+++++|+..|.+++|+| |.+.+++++.|++|++|
T Consensus 94 ----eAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~-wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVW 168 (794)
T KOG0276|consen 94 ----EAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENE-WACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVW 168 (794)
T ss_pred ----eccccceeeeeecCCCCeEEecCCccEEEEeeccCc-eeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEE
Confidence 679999999999999999999999999999999765 678999999999999999999 77899999999999999
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecC--CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPF--DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
.+.+. .+..++.+|...|+|+.|-+- ..+|++|+.|.+|++||.++.. ++.++.+|...|..+.|+|.-..
T Consensus 169 slgs~---~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~----CV~TLeGHt~Nvs~v~fhp~lpi 241 (794)
T KOG0276|consen 169 SLGSP---HPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKS----CVQTLEGHTNNVSFVFFHPELPI 241 (794)
T ss_pred EcCCC---CCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHH----HHHHhhcccccceEEEecCCCcE
Confidence 99887 667789999999999999884 4799999999999999999765 58999999999999999999999
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeE
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAI 307 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i 307 (479)
+++|++||++|||+..+ .+...++.-. ...+++++-.+.+..++.|...|.|
T Consensus 242 iisgsEDGTvriWhs~T---------------y~lE~tLn~g-leRvW~I~~~k~~~~i~vG~Deg~i 293 (794)
T KOG0276|consen 242 IISGSEDGTVRIWNSKT---------------YKLEKTLNYG-LERVWCIAAHKGDGKIAVGFDEGSV 293 (794)
T ss_pred EEEecCCccEEEecCcc---------------eehhhhhhcC-CceEEEEeecCCCCeEEEeccCCcE
Confidence 99999999999998633 3334444443 5577788777777777777666554
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=217.84 Aligned_cols=263 Identities=24% Similarity=0.425 Sum_probs=219.1
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
.+.-..|++.|.++...-.|++|||++.|++|+|+.++...... ..
T Consensus 4 q~idt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~----------------------------------ll 49 (299)
T KOG1332|consen 4 QTIDTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSK----------------------------------LL 49 (299)
T ss_pred eehhhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCce----------------------------------ee
Confidence 34456899999999998899999999999999999987544311 11
Q ss_pred EeccccCCcEEEEEECC--CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCcEE
Q psy14815 84 ILSDGHQRTIRETAWSP--CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVW 159 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~--~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~ 159 (479)
..+.+|.++|+.++|.. .|.+||++++||.|.||.-+++++........|...|++++|.|. |-.|++++.||.|.
T Consensus 50 ~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vs 129 (299)
T KOG1332|consen 50 AELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVS 129 (299)
T ss_pred eEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEE
Confidence 22479999999999965 799999999999999999999988888888899999999999994 56899999999999
Q ss_pred EEEeCCCCceeeeeeeeccccceeEEEEecC---C-----------CEEEEEEcCCcEEEEecCCcccceEeeeeecCCC
Q psy14815 160 VWEVGEEDEYECAAVINAHIQDVKKVRFHPF---D-----------NILASASYDDTVKLFKEDKAEADWINFATLKSHT 225 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~---~-----------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 225 (479)
+.+.+.............|.-.|++++|.|. | +.|++|+.|..|+||+.... .|..-..+.+|.
T Consensus 130 vl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~--~w~~e~~l~~H~ 207 (299)
T KOG1332|consen 130 VLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSD--SWKLERTLEGHK 207 (299)
T ss_pred EEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCc--chhhhhhhhhcc
Confidence 9999887555666677899999999999985 4 57999999999999999876 455566799999
Q ss_pred ccEEEEEEccCC----CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEE
Q psy14815 226 STVWSLAFDRIG----SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA 301 (479)
Q Consensus 226 ~~v~~~~~~~~~----~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~ 301 (479)
..|..++|.|.- .+|++|+.||++.||..+....+- ..+++.. ....++.++|+..|.+|+++
T Consensus 208 dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~w---------k~tll~~----f~~~~w~vSWS~sGn~LaVs 274 (299)
T KOG1332|consen 208 DWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPW---------KKTLLEE----FPDVVWRVSWSLSGNILAVS 274 (299)
T ss_pred hhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCcc---------ccccccc----CCcceEEEEEeccccEEEEe
Confidence 999999999964 579999999999999876332221 1122222 35689999999999999999
Q ss_pred eCCCeEEEcccCCC
Q psy14815 302 CGDDAIRIFKENPE 315 (479)
Q Consensus 302 ~~dg~i~vw~~~~~ 315 (479)
+.|+.|.+|.-+..
T Consensus 275 ~GdNkvtlwke~~~ 288 (299)
T KOG1332|consen 275 GGDNKVTLWKENVD 288 (299)
T ss_pred cCCcEEEEEEeCCC
Confidence 99999999976543
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-31 Score=233.20 Aligned_cols=309 Identities=18% Similarity=0.238 Sum_probs=239.1
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
.+.+..|.-+|.|++++|+.++.++++.||+|.-|++.++....-+...+. + +...+.+.....
T Consensus 135 ~~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~e------------v----~k~~~~~~k~~r 198 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDE------------V----LKSHGNPLKESR 198 (479)
T ss_pred ceeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccch------------h----hhhccCCCCccc
Confidence 356678999999999999999999999999999999998886532211100 0 000011111110
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
..|.+.+.+++.++|+++|++|+.|..|.||+.++.+ .+..+.+|.+.|.+++|-.....+++++.|+.|++|++
T Consensus 199 ---~~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~e--hv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~ 273 (479)
T KOG0299|consen 199 ---KGHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLE--HVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSI 273 (479)
T ss_pred ---ccccceeEEEEEcCCCcEEEecCCCceEEEecCcccc--hhhcccccccceeeeeeecCccceeeeecCCceEEEeh
Confidence 3799999999999999999999999999999999986 67789999999999999988889999999999999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
... ..+.++.+|+..|.++.....++.+-+|+.|+++++|++.... ...+.++.+.+-|++|-. ..++++|
T Consensus 274 ~~~---s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~ees-----qlifrg~~~sidcv~~In-~~HfvsG 344 (479)
T KOG0299|consen 274 DQL---SYVETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPEES-----QLIFRGGEGSIDCVAFIN-DEHFVSG 344 (479)
T ss_pred hHh---HHHHHHhCCccceeeechhcccceEEeccccceeEEEeccccc-----eeeeeCCCCCeeeEEEec-ccceeec
Confidence 877 6677888999999999988888888888899999999995432 345678889999999974 5688999
Q ss_pred eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCcee
Q psy14815 244 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVS 323 (479)
Q Consensus 244 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 323 (479)
+++|.|.+|++.+.........++..... .... . +...|++++..|...++++|+.+|.|++|.+..+- ..
T Consensus 345 SdnG~IaLWs~~KKkplf~~~~AHgv~~~--~~~~-~-~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~-----r~ 415 (479)
T KOG0299|consen 345 SDNGSIALWSLLKKKPLFTSRLAHGVIPE--LDPV-N-GNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGL-----RA 415 (479)
T ss_pred cCCceEEEeeecccCceeEeeccccccCC--cccc-c-cccceeeeEecccCceEEecCCCCceEEEEecCCc-----cc
Confidence 99999999998665443222222111110 0000 0 13489999999999999999999999999998874 12
Q ss_pred eEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 324 FDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 324 ~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
++++..+ .-.+.|++++|+++|+++..+
T Consensus 416 i~~l~~l--s~~GfVNsl~f~~sgk~ivag 443 (479)
T KOG0299|consen 416 INLLYSL--SLVGFVNSLAFSNSGKRIVAG 443 (479)
T ss_pred cceeeec--ccccEEEEEEEccCCCEEEEe
Confidence 3344443 256889999999999976444
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=221.76 Aligned_cols=277 Identities=21% Similarity=0.290 Sum_probs=236.4
Q ss_pred cccccccccceEEEEECC---CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 4 SQTLKGHQGRVWNVSWNP---QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~---~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
..+-.||+.+|-.++||| +|-+|++++.||.-.+-+=++|..+.+|
T Consensus 7 pl~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtf------------------------------- 55 (334)
T KOG0278|consen 7 PLTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTF------------------------------- 55 (334)
T ss_pred ceEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEee-------------------------------
Confidence 345679999999999986 8889999999999888877777776665
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
.+|.+.|+....+.+....++++.|-+-++||.-+|. .+..+. |..-|.+++|+.|.++|++|+.+..+|+
T Consensus 56 ------eghkgavw~~~l~~na~~aasaaadftakvw~a~tgd--elhsf~-hkhivk~~af~~ds~~lltgg~ekllrv 126 (334)
T KOG0278|consen 56 ------EGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGD--ELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRV 126 (334)
T ss_pred ------eccCcceeeeecCchhhhhhhhcccchhhhhhhhhhh--hhhhhh-hhheeeeEEecccchhhhccchHHHhhh
Confidence 6899999999999999999999999999999999996 566665 8889999999999999999999999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEE
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 240 (479)
||++..+ .+...+.+|.+.|+.+.|....+.+++++.|++||+||.+++.. +.++. ...+|+++.++++|++|
T Consensus 127 fdln~p~--App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~----v~sL~-~~s~VtSlEvs~dG~il 199 (334)
T KOG0278|consen 127 FDLNRPK--APPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTE----VQSLE-FNSPVTSLEVSQDGRIL 199 (334)
T ss_pred hhccCCC--CCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcE----EEEEe-cCCCCcceeeccCCCEE
Confidence 9998875 45567889999999999999999999999999999999998875 44443 45779999999999877
Q ss_pred EEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCC
Q psy14815 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSD 320 (479)
Q Consensus 241 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 320 (479)
.++ .-+.|++||.... ..+..++. ...|.+.+++|+...+++|++|..++.||..+++
T Consensus 200 Tia-~gssV~Fwdaksf---------------~~lKs~k~--P~nV~SASL~P~k~~fVaGged~~~~kfDy~Tge---- 257 (334)
T KOG0278|consen 200 TIA-YGSSVKFWDAKSF---------------GLLKSYKM--PCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGE---- 257 (334)
T ss_pred EEe-cCceeEEeccccc---------------cceeeccC--ccccccccccCCCceEEecCcceEEEEEeccCCc----
Confidence 555 5677999998443 44555554 4578899999999999999999999999999998
Q ss_pred ceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 321 MVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 321 ~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.+....++|.++|.|+.|||||..-++++
T Consensus 258 -----Ei~~~nkgh~gpVhcVrFSPdGE~yAsGS 286 (334)
T KOG0278|consen 258 -----EIGSYNKGHFGPVHCVRFSPDGELYASGS 286 (334)
T ss_pred -----eeeecccCCCCceEEEEECCCCceeeccC
Confidence 23333589999999999999999887765
|
|
| >PF01784 NIF3: NIF3 (NGG1p interacting factor 3); InterPro: IPR002678 This family contains several NIF3 (NGG1p interacting factor 3) protein homologues | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=246.92 Aligned_cols=116 Identities=40% Similarity=0.718 Sum_probs=106.3
Q ss_pred HHHHHHHHhCCCccCCCCCcceeeeccCCCcCcccEEEEEecCCHHHHHHHHHcCCCEEEEeCCCCcccccccCcCChhh
Q psy14815 359 DVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKE 438 (479)
Q Consensus 359 ~~~~~l~~~~p~~~a~~wd~~Gl~v~~~~~~~~v~~il~~~d~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~ 438 (479)
|++..+++++|..++++|||+||+++.++ ++|++|++++|+|++++++|+++|||+||||||+||+|+++++..++++
T Consensus 1 ei~~~le~~~p~~~a~~wDn~Gl~vg~~~--~~v~~V~~~ld~t~~vi~~A~~~~~dlIItHHP~~f~~~~~~~~~~~~~ 78 (241)
T PF01784_consen 1 EIINFLEELAPLSLAEDWDNVGLQVGDPE--QEVKKVLVALDATPEVIEEAIEKGADLIITHHPLFFKPLKSLTGDDYKG 78 (241)
T ss_dssp HHHHHHHHHSTGGGSTTTS-EEEEES-SS--SBESEEEEESS-SHHHHHHHHHTT-SEEEESS-SSSSTSSHCHCHSHHH
T ss_pred CHHHHHHHhCCHhHcCCCCCCceEECcCc--cccCEEEEEEeCCHHHHHHHHHcCCCEEEEcCchhhcCCccccccchhh
Confidence 57889999999999999999999998554 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCceEEeccccccccCCCccccCCCcCCCC
Q psy14815 439 RVVSTCLAHNIAVYSPHTTWDAIQEGRTKKAPPEVQVP 476 (479)
Q Consensus 439 ~~~~~~~~~~~~~~~~h~~~d~~~~g~~~~~~~~~~~~ 476 (479)
+++.+|+++||+||++|||||++++|+|++||++||+.
T Consensus 79 ~~~~~li~~~I~vy~~Ht~lD~~~~G~n~~La~~Lgl~ 116 (241)
T PF01784_consen 79 KIIEKLIKNGISVYSAHTNLDAAPGGVNDYLAKKLGLE 116 (241)
T ss_dssp HHHHHHHHTT-EEEEESHHHHHSTTSHHHHHHHHHTEE
T ss_pred HHHHHHHHCCCEEEEecccccccCcCHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999975
|
NIF3 interacts with the yeast transcriptional coactivator NGG1p which is part of the ADA complex, the exact function of this interaction is unknown [][].; PDB: 1NMO_F 1NMP_B 2GX8_C 2FYW_B 2NYD_A 3LNL_A 2YYB_A 3RXY_F. |
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-31 Score=223.43 Aligned_cols=299 Identities=18% Similarity=0.288 Sum_probs=229.8
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccc----cccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIR----EPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
..+..|++++.+.+|+|||.++||||.|-.|+|.|++.. ++...+.+. .....
T Consensus 106 ~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~-----------------------~qa~h 162 (430)
T KOG0640|consen 106 KYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGD-----------------------TQARH 162 (430)
T ss_pred EEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCC-----------------------cccCC
Confidence 457789999999999999999999999999999998621 111111110 01111
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
.....+..|.+.|+++.|+|....|++|+.|++|+++|+.......-...-....+|.++.|+|.|.++++|.....+++
T Consensus 163 PvIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rl 242 (430)
T KOG0640|consen 163 PVIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRL 242 (430)
T ss_pred ceEeehhhccCcccceeecchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeE
Confidence 23334578999999999999999999999999999999976432222222234568999999999999999999999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeee-cCCC-ccEEEEEEccCCC
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL-KSHT-STVWSLAFDRIGS 238 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~-~~v~~~~~~~~~~ 238 (479)
||+++.+.......-..|...|+++.+++.+++.++|+.||.|++||--+... +.++ .+|. ..|.+..|..+++
T Consensus 243 Ydv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rC----v~t~~~AH~gsevcSa~Ftkn~k 318 (430)
T KOG0640|consen 243 YDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRC----VRTIGNAHGGSEVCSAVFTKNGK 318 (430)
T ss_pred EeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHH----HHHHHhhcCCceeeeEEEccCCe
Confidence 99998744333344567889999999999999999999999999999876543 4444 3454 5789999999999
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc----ccccEEEEEecCCCCeEEEEeC-CCeEEEcccC
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH----HGRTIYDISWCHLTDLIATACG-DDAIRIFKEN 313 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~l~~~~~~~~l~~~~~-dg~i~vw~~~ 313 (479)
++++.+.|..+++|.+.. ++++..+.|. ...--+...|+....|++.-.+ .+.+.-||.+
T Consensus 319 yiLsSG~DS~vkLWEi~t---------------~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaR 383 (430)
T KOG0640|consen 319 YILSSGKDSTVKLWEIST---------------GRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDAR 383 (430)
T ss_pred EEeecCCcceeeeeeecC---------------CceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeecccc
Confidence 999999999999999844 4556666553 1112344567777888776654 4789999999
Q ss_pred CCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 314 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+.. .+.....+|++.+..+.-||.++.+..++
T Consensus 384 tad---------r~~l~slgHn~a~R~i~HSP~~p~FmTcs 415 (430)
T KOG0640|consen 384 TAD---------RVALLSLGHNGAVRWIVHSPVEPAFMTCS 415 (430)
T ss_pred chh---------hhhhcccCCCCCceEEEeCCCCCceeeec
Confidence 876 34445569999999999999998776654
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-31 Score=216.36 Aligned_cols=235 Identities=23% Similarity=0.370 Sum_probs=197.6
Q ss_pred ccCCcEEEEEECCC-CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEEeCC
Q psy14815 88 GHQRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 88 ~~~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vwd~~~ 165 (479)
.-.+.+..++|+++ .+.+++++.||++++||+.... .++..++.|...|.++.|++ +++.+++++.|++|++|+...
T Consensus 58 d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s-~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r 136 (311)
T KOG0277|consen 58 DTEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPS-KPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNR 136 (311)
T ss_pred ecccceeEeeecCCCcceEEEEecCceEEEeccCCCC-cchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCC
Confidence 34678999999995 5788999999999999965433 57889999999999999998 667788899999999999987
Q ss_pred CCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC-CCEEEEe
Q psy14815 166 EDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLATC 243 (479)
Q Consensus 166 ~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~ 243 (479)
+ ..++++.+|...|...+|+| ..+++++++.|+++++||++.... ...+..|..++.++.|+.. .+.++||
T Consensus 137 ~---~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk----~~~i~ah~~Eil~cdw~ky~~~vl~Tg 209 (311)
T KOG0277|consen 137 P---NSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGK----FMSIEAHNSEILCCDWSKYNHNVLATG 209 (311)
T ss_pred C---cceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCc----eeEEEeccceeEeecccccCCcEEEec
Confidence 7 66778999999999999999 678999999999999999997754 3338889999999999874 5678999
Q ss_pred eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCC-CCeEEEEeCCCeEEEcccCCCCCCCCce
Q psy14815 244 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL-TDLIATACGDDAIRIFKENPEAGDSDMV 322 (479)
Q Consensus 244 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~-~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 322 (479)
+.|+.|+.||++.... ++..+.+| +-.|+.+.|||. ..+|++++.|-++++||...+.
T Consensus 210 ~vd~~vr~wDir~~r~--------------pl~eL~gh-~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~d------ 268 (311)
T KOG0277|consen 210 GVDNLVRGWDIRNLRT--------------PLFELNGH-GLAVRKVKFSPHHASLLASASYDMTVRIWDPERQD------ 268 (311)
T ss_pred CCCceEEEEehhhccc--------------cceeecCC-ceEEEEEecCcchhhHhhhccccceEEecccccch------
Confidence 9999999999976643 36778887 899999999996 4589999999999999998765
Q ss_pred eeEEEeccccccccceeEEEecCCCC-CCCccc
Q psy14815 323 SFDLVHTEHRAHNQDVNCVAWNPVVP-EPQKTN 354 (479)
Q Consensus 323 ~~~~~~~~~~~h~~~v~~~~~sp~~~-~l~~~~ 354 (479)
-......-|++.+..+.||+-.+ ++|+.+
T Consensus 269 ---s~~e~~~~HtEFv~g~Dws~~~~~~vAs~g 298 (311)
T KOG0277|consen 269 ---SAIETVDHHTEFVCGLDWSLFDPGQVASTG 298 (311)
T ss_pred ---hhhhhhhccceEEeccccccccCceeeecc
Confidence 24444567999999999998744 445443
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.9e-31 Score=217.03 Aligned_cols=243 Identities=20% Similarity=0.392 Sum_probs=201.6
Q ss_pred cccceEEEEECCC-CCeEEEeeCCCcEEEEeccc-ccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecc
Q psy14815 10 HQGRVWNVSWNPQ-GTMISSCGEDKNIRLWVMVI-REPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSD 87 (479)
Q Consensus 10 h~~~V~~l~~s~~-~~~l~t~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~ 87 (479)
-.+.+..++|++. .+.+++++-||+++|||+.. ..++. ..+
T Consensus 59 ~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~-------------------------------------~~k 101 (311)
T KOG0277|consen 59 TEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIH-------------------------------------KFK 101 (311)
T ss_pred cccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchh-------------------------------------HHH
Confidence 3567889999984 45778888899999998431 11222 236
Q ss_pred ccCCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEEeCC
Q psy14815 88 GHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 88 ~~~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vwd~~~ 165 (479)
.|...|.++.|++ ++..+++++.|++|++|+...++ .+.++.+|...|+...|+| .++.+++++.|+.+++||++.
T Consensus 102 EH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~--Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~ 179 (311)
T KOG0277|consen 102 EHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPN--SVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRS 179 (311)
T ss_pred hhhhheEEeccccccceeEEeeccCCceEeecCCCCc--ceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecC
Confidence 8999999999998 56778888999999999998776 6788999999999999999 778999999999999999998
Q ss_pred CCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC-CEEEEe
Q psy14815 166 EDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SRLATC 243 (479)
Q Consensus 166 ~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~ 243 (479)
.. ....+..|...+.|+.|+. +.+.+++|+.|+.|+.||+++.. .++..+.+|.-.|..++|||.. ..|+++
T Consensus 180 ~g---k~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r---~pl~eL~gh~~AVRkvk~Sph~~~lLaSa 253 (311)
T KOG0277|consen 180 PG---KFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLR---TPLFELNGHGLAVRKVKFSPHHASLLASA 253 (311)
T ss_pred CC---ceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhcc---ccceeecCCceEEEEEecCcchhhHhhhc
Confidence 74 2334888999999999998 66889999999999999999866 3688889999999999999964 578999
Q ss_pred eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC-CCCeEEEEeCCCeEEEccc
Q psy14815 244 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 244 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~-~~~~l~~~~~dg~i~vw~~ 312 (479)
+.|-+++|||...+.. ++.+... |..-+..+.|++ +..++|+++.|+.++||+.
T Consensus 254 sYDmT~riw~~~~~ds--------------~~e~~~~-HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 254 SYDMTVRIWDPERQDS--------------AIETVDH-HTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred cccceEEecccccchh--------------hhhhhhc-cceEEeccccccccCceeeecccccceeeecc
Confidence 9999999999854432 2334444 477889999997 4669999999999999974
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.4e-30 Score=215.89 Aligned_cols=281 Identities=16% Similarity=0.279 Sum_probs=213.7
Q ss_pred ccccceEEEEECC-CCCeEEEeeCCCcEEEEecccc-cccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 9 GHQGRVWNVSWNP-QGTMISSCGEDKNIRLWVMVIR-EPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 9 ~h~~~V~~l~~s~-~~~~l~t~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
.-.+.|.+++||| ...+++.+|.||+||+|+++.. ....+ ..
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~k------------------------------------a~ 68 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPK------------------------------------AQ 68 (347)
T ss_pred CcccchheeEeccccCceEEecccCCceEEEEEecCCcccch------------------------------------hh
Confidence 3468899999999 5566778999999999998752 22211 12
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCC--EEEEEeCCCcEEEEEeC
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ--FLATCSRDKSVWVWEVG 164 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~--~l~~~~~dg~i~vwd~~ 164 (479)
..|.++|.+++|+.||..+++|+.|+.+++||+.+++ ...+..|..+|.++.|-+... .|+|||.|++|+.||++
T Consensus 69 ~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q---~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R 145 (347)
T KOG0647|consen 69 QSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQ---VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTR 145 (347)
T ss_pred hccCCCeEEEEEccCCceEEeeccCCceEEEEccCCC---eeeeeecccceeEEEEecCCCcceeEecccccceeecccC
Confidence 5789999999999999999999999999999999995 556778999999999988555 89999999999999999
Q ss_pred CCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee
Q psy14815 165 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244 (479)
Q Consensus 165 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 244 (479)
...+ +.++.- ...+.++.. ....++.+..++.|.+|+++++...++.+. ....-.+.|++.-++.+..+.|+
T Consensus 146 ~~~p---v~t~~L-PeRvYa~Dv--~~pm~vVata~r~i~vynL~n~~te~k~~~--SpLk~Q~R~va~f~d~~~~alGs 217 (347)
T KOG0647|consen 146 SSNP---VATLQL-PERVYAADV--LYPMAVVATAERHIAVYNLENPPTEFKRIE--SPLKWQTRCVACFQDKDGFALGS 217 (347)
T ss_pred CCCe---eeeeec-cceeeehhc--cCceeEEEecCCcEEEEEcCCCcchhhhhc--CcccceeeEEEEEecCCceEeee
Confidence 8743 333322 234554443 356889999999999999987654332222 22345688999888888889999
Q ss_pred CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc--ccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCce
Q psy14815 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH--HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMV 322 (479)
Q Consensus 245 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 322 (479)
-+|.+-|..+..+..... -+++|-+.-... .-..|++++|+|.-..|++++.||++.+||-+.+.
T Consensus 218 iEGrv~iq~id~~~~~~n-------FtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~------ 284 (347)
T KOG0647|consen 218 IEGRVAIQYIDDPNPKDN-------FTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDART------ 284 (347)
T ss_pred ecceEEEEecCCCCccCc-------eeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhhh------
Confidence 999999999876533221 122332221110 12468899999999999999999999999988775
Q ss_pred eeEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 323 SFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 323 ~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
.......|.++|++++|+.+|.+++.+
T Consensus 285 ----kLk~s~~~~qpItcc~fn~~G~ifaYA 311 (347)
T KOG0647|consen 285 ----KLKTSETHPQPITCCSFNRNGSIFAYA 311 (347)
T ss_pred ----hhhccCcCCCccceeEecCCCCEEEEE
Confidence 223335789999999999999988655
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=6e-31 Score=229.09 Aligned_cols=252 Identities=21% Similarity=0.361 Sum_probs=208.3
Q ss_pred CcccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 1 ~~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
|.+.+||.||..+|.-+.||||.++|++|+.|..+++||+.+|.....+.
T Consensus 259 ~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~------------------------------ 308 (519)
T KOG0293|consen 259 FKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYP------------------------------ 308 (519)
T ss_pred eeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcc------------------------------
Confidence 45688999999999999999999999999999999999999988766552
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCC-CCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGH-ENEVKSVTWSKNGQFLATCSRDKSVW 159 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~~~~~dg~i~ 159 (479)
.++...+.+++|.|||..+++|+.|+++..||+.... ....++. ...|.+++.++||+++++.+.|..|+
T Consensus 309 ------~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~---~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~ 379 (519)
T KOG0293|consen 309 ------SGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNI---LGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIR 379 (519)
T ss_pred ------cCcCCCcceeEEccCCceeEecCCCCcEEEecCCcch---hhcccccccceeEEEEEcCCCcEEEEEeccccee
Confidence 3467889999999999999999999999999997653 2222222 24699999999999999999999999
Q ss_pred EEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCcc--EEEEEEcc-C
Q psy14815 160 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST--VWSLAFDR-I 236 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~--v~~~~~~~-~ 236 (479)
+++..+... .. +.....+|++++.+.+++++++.-.+..+++||+... ..+..+.+|... +-.-+|.. +
T Consensus 380 l~~~e~~~d---r~-lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~----~lv~kY~Ghkq~~fiIrSCFgg~~ 451 (519)
T KOG0293|consen 380 LYNREARVD---RG-LISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEEN----KLVRKYFGHKQGHFIIRSCFGGGN 451 (519)
T ss_pred eechhhhhh---hc-cccccCceeEEEEcCCCcEEEEEcccCeeEEeecchh----hHHHHhhcccccceEEEeccCCCC
Confidence 999987532 21 3334578999999999999999999999999999943 346777777643 44445643 4
Q ss_pred CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC-eEEEEeCCCeEEEcccCCC
Q psy14815 237 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPE 315 (479)
Q Consensus 237 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~~dg~i~vw~~~~~ 315 (479)
..++++||+|+.|+||+. .+++++..+.|| ...|++++|+|... .+|++|.||+||||.....
T Consensus 452 ~~fiaSGSED~kvyIWhr---------------~sgkll~~LsGH-s~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~~ 515 (519)
T KOG0293|consen 452 DKFIASGSEDSKVYIWHR---------------ISGKLLAVLSGH-SKTVNCVSWNPADPEMFASASDDGTIRIWGPSDN 515 (519)
T ss_pred cceEEecCCCceEEEEEc---------------cCCceeEeecCC-cceeeEEecCCCCHHHhhccCCCCeEEEecCCcc
Confidence 589999999999999997 445778999998 78999999999654 7999999999999977643
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-30 Score=223.96 Aligned_cols=278 Identities=20% Similarity=0.270 Sum_probs=233.8
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR 91 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 91 (479)
..|+++...|....++||+.|..+.++|..+++.+..+ .||..
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~-------------------------------------~Gh~k 262 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATL-------------------------------------KGHTK 262 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhc-------------------------------------cCcce
Confidence 56888888888889999999999999998888877665 68999
Q ss_pred cEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceee
Q psy14815 92 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYEC 171 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 171 (479)
.|+.+.++|+...+++++.|..|+||...... .......|..+|+.+..+|.|.||++++.||+..+.|++++..+..
T Consensus 263 ki~~v~~~~~~~~v~~aSad~~i~vws~~~~s--~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~ 340 (506)
T KOG0289|consen 263 KITSVKFHKDLDTVITASADEIIRVWSVPLSS--EPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTV 340 (506)
T ss_pred EEEEEEeccchhheeecCCcceEEeecccccc--CccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEE
Confidence 99999999999999999999999999987665 5667788999999999999999999999999999999999854332
Q ss_pred eeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEE
Q psy14815 172 AAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKI 251 (479)
Q Consensus 172 ~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i 251 (479)
... ....-.+++.+|+|||.+|.+|..||.|++||+..+.. ...+.+|.++|..++|+.+|-+|+++++|+.|++
T Consensus 341 vs~-~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~----~a~Fpght~~vk~i~FsENGY~Lat~add~~V~l 415 (506)
T KOG0289|consen 341 VSD-ETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTN----VAKFPGHTGPVKAISFSENGYWLATAADDGSVKL 415 (506)
T ss_pred Eee-ccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccc----cccCCCCCCceeEEEeccCceEEEEEecCCeEEE
Confidence 221 12334589999999999999999999999999997664 7788999999999999999999999999999999
Q ss_pred EeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccc
Q psy14815 252 WKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH 331 (479)
Q Consensus 252 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~ 331 (479)
||+++..+. .++......++.++.|.+.|++|+.++.|=.|++++-.+.+ |.++...
T Consensus 416 wDLRKl~n~---------------kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~-------W~~~~~~- 472 (506)
T KOG0289|consen 416 WDLRKLKNF---------------KTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKTKS-------WTEIKEL- 472 (506)
T ss_pred EEehhhccc---------------ceeeccccccceeEEEcCCCCeEEeecceeEEEEEeccccc-------ceeeehh-
Confidence 999877643 33333334579999999999999999877666666644443 3344443
Q ss_pred cccccceeEEEecCCCCCCCccccc
Q psy14815 332 RAHNQDVNCVAWNPVVPEPQKTNLT 356 (479)
Q Consensus 332 ~~h~~~v~~~~~sp~~~~l~~~~~~ 356 (479)
..|.+..+++.|..+.++++++++.
T Consensus 473 ~~~sg~st~v~Fg~~aq~l~s~smd 497 (506)
T KOG0289|consen 473 ADHSGLSTGVRFGEHAQYLASTSMD 497 (506)
T ss_pred hhcccccceeeecccceEEeeccch
Confidence 5788899999999999999998864
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=261.89 Aligned_cols=256 Identities=18% Similarity=0.284 Sum_probs=202.9
Q ss_pred ccceEEEEECC-CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 11 QGRVWNVSWNP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 11 ~~~V~~l~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
...|.+++|+| ++.+|++++.||+|++||+.+++.+..+ .+|
T Consensus 532 ~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~-------------------------------------~~H 574 (793)
T PLN00181 532 RSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEM-------------------------------------KEH 574 (793)
T ss_pred cCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEe-------------------------------------cCC
Confidence 46799999987 5789999999999999998766544332 578
Q ss_pred CCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEc-CCCCEEEEEeCCCcEEEEEeCCCC
Q psy14815 90 QRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWS-KNGQFLATCSRDKSVWVWEVGEED 167 (479)
Q Consensus 90 ~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~-~~~~~l~~~~~dg~i~vwd~~~~~ 167 (479)
...|++++|+| ++.+|++|+.|++|++||+++++ ....+..+ ..+.++.|+ +++.+|++|+.||.|++||++...
T Consensus 575 ~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~--~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~ 651 (793)
T PLN00181 575 EKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV--SIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPK 651 (793)
T ss_pred CCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCc--EEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 99999999997 78999999999999999999886 45556544 579999995 479999999999999999998753
Q ss_pred ceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCccc--ceEeeeeecCCCccEEEEEEccCCCEEEEeeC
Q psy14815 168 EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA--DWINFATLKSHTSTVWSLAFDRIGSRLATCSD 245 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 245 (479)
.....+.+|...|+++.|. ++..|++++.|++|++||++.... ...++..+.+|...+.+++|++++++|++|+.
T Consensus 652 --~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~ 728 (793)
T PLN00181 652 --LPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSE 728 (793)
T ss_pred --ccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeC
Confidence 2345667899999999997 678999999999999999985421 22456788899999999999999999999999
Q ss_pred CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 246 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 246 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
|+.|++|+.................. .-..... +...|.+++|+|++..|++|+.||.|+||++
T Consensus 729 D~~v~iw~~~~~~~~~s~~~~~~~~~--~~~~~~~-~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 729 TNEVFVYHKAFPMPVLSYKFKTIDPV--SGLEVDD-ASQFISSVCWRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred CCEEEEEECCCCCceEEEecccCCcc--cccccCC-CCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence 99999999754422110000000000 0001122 3567999999999999999999999999986
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-31 Score=228.71 Aligned_cols=279 Identities=15% Similarity=0.284 Sum_probs=225.9
Q ss_pred ccccccccceEEEEECCCC-CeEEEeeCCCcEEEEecccccccccccCCC--------ccceEEEeecCCcEEEecCCCC
Q psy14815 5 QTLKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLWVMVIREPYEKLHGLP--------VETSLRQLVEDKNIRLWGKESF 75 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~-~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~--------~~~~~~~~~~~~~i~~w~~~~~ 75 (479)
-.|.||.++|.|++=+|.. ..++||+.||.|+|||+...+++..+..+. ....+++++.|.+++.|..+.
T Consensus 60 ~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~~~~~tvgdDKtvK~wk~~~- 138 (433)
T KOG0268|consen 60 GSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQTSFFTVGDDKTVKQWKIDG- 138 (433)
T ss_pred hhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecccceEEecCCcceeeeeccC-
Confidence 4578999999999999976 789999999999999999999999888774 246788889999999999873
Q ss_pred CCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCC-CEEEEEeC
Q psy14815 76 GNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG-QFLATCSR 154 (479)
Q Consensus 76 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~ 154 (479)
. ..........+..+.-+..+..++|||. .|.|||.+... ++..+.--...|.++.|+|-. ..|++|..
T Consensus 139 -~-----p~~tilg~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~--Pv~smswG~Dti~svkfNpvETsILas~~s 208 (433)
T KOG0268|consen 139 -P-----PLHTILGKSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDN--PVSSMSWGADSISSVKFNPVETSILASCAS 208 (433)
T ss_pred -C-----cceeeeccccccccccccccccccccCc--eeeecccccCC--ccceeecCCCceeEEecCCCcchheeeecc
Confidence 1 1111223456777777777889999986 59999998776 566676667789999999954 56777889
Q ss_pred CCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEc
Q psy14815 155 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD 234 (479)
Q Consensus 155 dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~ 234 (479)
|+.|.+||++...+...+.. ...-+.++|+|++-.+++|++|..++.||++... .++....+|.+.|.++.||
T Consensus 209 DrsIvLyD~R~~~Pl~KVi~----~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~---~p~~v~~dhvsAV~dVdfs 281 (433)
T KOG0268|consen 209 DRSIVLYDLRQASPLKKVIL----TMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLS---RPLNVHKDHVSAVMDVDFS 281 (433)
T ss_pred CCceEEEecccCCccceeee----eccccceecCccccceeeccccccceehhhhhhc---ccchhhcccceeEEEeccC
Confidence 99999999999865443322 2335679999988889999999999999999765 3677788999999999999
Q ss_pred cCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCC
Q psy14815 235 RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 314 (479)
Q Consensus 235 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~ 314 (479)
|.|+.+++||.|.+|+||..+....... +....-..|.++.|+.|.+|+++||.|+.|++|....
T Consensus 282 ptG~EfvsgsyDksIRIf~~~~~~SRdi---------------YhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~A 346 (433)
T KOG0268|consen 282 PTGQEFVSGSYDKSIRIFPVNHGHSRDI---------------YHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKA 346 (433)
T ss_pred CCcchhccccccceEEEeecCCCcchhh---------------hhHhhhheeeEEEEeccccEEEecCCCcceeeeecch
Confidence 9999999999999999999866543211 1111245799999999999999999999999998765
Q ss_pred CC
Q psy14815 315 EA 316 (479)
Q Consensus 315 ~~ 316 (479)
.+
T Consensus 347 se 348 (433)
T KOG0268|consen 347 SE 348 (433)
T ss_pred hh
Confidence 44
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-29 Score=238.50 Aligned_cols=267 Identities=16% Similarity=0.245 Sum_probs=193.7
Q ss_pred EEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCC-CCE
Q psy14815 26 ISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GNF 104 (479)
Q Consensus 26 l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~-~~~ 104 (479)
.++++.+....+|++..|. ..+.+++|+.... .......+|...|.+++|+|+ +.+
T Consensus 33 ~ia~n~~~~A~~w~~~gGG------------------~~gvI~L~~~~r~-----~~v~~L~gH~~~V~~lafsP~~~~l 89 (568)
T PTZ00420 33 GIACSSGFVAVPWEVEGGG------------------LIGAIRLENQMRK-----PPVIKLKGHTSSILDLQFNPCFSEI 89 (568)
T ss_pred eEeeCCCeEEEEEEcCCCC------------------ceeEEEeeecCCC-----ceEEEEcCCCCCEEEEEEcCCCCCE
Confidence 3455555566677654333 2345666665421 122234689999999999996 789
Q ss_pred EEEEECCCeEEEEECCCCeE------EEeEEEeCCCCcEEEEEEcCCCCE-EEEEeCCCcEEEEEeCCCCceeeeeeeec
Q psy14815 105 IASASFDATTAVWDKRSGQF------ECNATLEGHENEVKSVTWSKNGQF-LATCSRDKSVWVWEVGEEDEYECAAVINA 177 (479)
Q Consensus 105 l~t~~~dg~i~iwd~~~~~~------~~~~~~~~~~~~v~~l~~~~~~~~-l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 177 (479)
|++|+.|++|++||+.++.. .....+.+|...|.+++|+|++.. +++++.|+.|++||++++. ....+.
T Consensus 90 LASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~---~~~~i~- 165 (568)
T PTZ00420 90 LASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEK---RAFQIN- 165 (568)
T ss_pred EEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCc---EEEEEe-
Confidence 99999999999999976421 134467889999999999998875 5789999999999999874 233333
Q ss_pred cccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEE-----EEEccCCCEEEEeeCCC----e
Q psy14815 178 HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWS-----LAFDRIGSRLATCSDDA----T 248 (479)
Q Consensus 178 ~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~l~s~~~dg----~ 248 (479)
|...|.+++|+|+|++|++++.|+.|++||++++.. +.++.+|.+.+.+ ..|++++++|++++.|+ .
T Consensus 166 ~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~----i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~ 241 (568)
T PTZ00420 166 MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEI----ASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMRE 241 (568)
T ss_pred cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcE----EEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccE
Confidence 557899999999999999999999999999997653 5677888876533 33568889999988774 7
Q ss_pred EEEEeccCCCCCCCCCCCCCCCceEEEEEEeccc-cccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEE
Q psy14815 249 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLV 327 (479)
Q Consensus 249 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~ 327 (479)
|+|||++.... ++..+..+. ...+......+++.++++|+.|+.|++|++..+. +
T Consensus 242 VkLWDlr~~~~--------------pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~----------~ 297 (568)
T PTZ00420 242 MKLWDLKNTTS--------------ALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGS----------I 297 (568)
T ss_pred EEEEECCCCCC--------------ceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCc----------E
Confidence 99999975432 223322221 2333334445568899999999999999997764 2
Q ss_pred ecc-ccccccceeEEEecCCC
Q psy14815 328 HTE-HRAHNQDVNCVAWNPVV 347 (479)
Q Consensus 328 ~~~-~~~h~~~v~~~~~sp~~ 347 (479)
..+ ...+..++.+++|.|..
T Consensus 298 ~~l~~~~s~~p~~g~~f~Pkr 318 (568)
T PTZ00420 298 RKVNEYKSCSPFRSFGFLPKQ 318 (568)
T ss_pred EeecccccCCCccceEEcccc
Confidence 111 12366788999999974
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-31 Score=230.46 Aligned_cols=276 Identities=17% Similarity=0.277 Sum_probs=222.9
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEeccccc--ccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIRE--PYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
...+..|.+.|..+.|-++...|+||+.|..|++|++..++ .+.+
T Consensus 168 ~~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~t--------------------------------- 214 (459)
T KOG0288|consen 168 LFVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELIST--------------------------------- 214 (459)
T ss_pred hhhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhh---------------------------------
Confidence 45677899999999999998999999999999999986544 2222
Q ss_pred eEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14815 82 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vw 161 (479)
+.+..++|+.+.|.+++..+++++.|+.+++|++.+.+ ...++.+|++.|+++.|......+++|+.|.+|+.|
T Consensus 215 ----LaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r--~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~W 288 (459)
T KOG0288|consen 215 ----LAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLR--LRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLW 288 (459)
T ss_pred ----hhccCCCcceeeecCCCceEEeecCCCceeeeeccchh--hhhhhcccccceeeehhhccccceeeccccchhhhh
Confidence 24667899999999999999999999999999999886 678899999999999999877779999999999999
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 241 (479)
|+... .+...... .+.+..|+.+ ...+++|-.|+.|++||.+.... ......+ +.|+++..++++..++
T Consensus 289 Dl~k~---~C~kt~l~-~S~cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~----~~sv~~g-g~vtSl~ls~~g~~lL 357 (459)
T KOG0288|consen 289 DLQKA---YCSKTVLP-GSQCNDIVCS--ISDVISGHFDKKVRFWDIRSADK----TRSVPLG-GRVTSLDLSMDGLELL 357 (459)
T ss_pred hhhhh---heeccccc-cccccceEec--ceeeeecccccceEEEeccCCce----eeEeecC-cceeeEeeccCCeEEe
Confidence 99875 44433322 2345566665 56788999999999999997764 4555544 4899999999999999
Q ss_pred EeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEec---cccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCC
Q psy14815 242 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG---HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 318 (479)
Q Consensus 242 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 318 (479)
+++.|.++.+.|++...- ...+.. ......+.+.|||++.|+++||.||.|+||++.+++
T Consensus 358 sssRDdtl~viDlRt~eI---------------~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgK-- 420 (459)
T KOG0288|consen 358 SSSRDDTLKVIDLRTKEI---------------RQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGK-- 420 (459)
T ss_pred eecCCCceeeeecccccE---------------EEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCce--
Confidence 999999999999865432 222211 123458899999999999999999999999999998
Q ss_pred CCceeeEEEecccccccc--ceeEEEecCCCCCCCccc
Q psy14815 319 SDMVSFDLVHTEHRAHNQ--DVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 319 ~~~~~~~~~~~~~~~h~~--~v~~~~~sp~~~~l~~~~ 354 (479)
+......... .|++++|+|.|..|....
T Consensus 421 --------lE~~l~~s~s~~aI~s~~W~~sG~~Llsad 450 (459)
T KOG0288|consen 421 --------LEKVLSLSTSNAAITSLSWNPSGSGLLSAD 450 (459)
T ss_pred --------EEEEeccCCCCcceEEEEEcCCCchhhccc
Confidence 4333333333 599999999999886553
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-30 Score=248.85 Aligned_cols=285 Identities=21% Similarity=0.385 Sum_probs=226.6
Q ss_pred ccccceEEEEECCCCCeEEEee--CCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCG--EDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
++...|.++..+|||..++||+ .||.++||+.+.--.... .+ ...........
T Consensus 11 H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~--------------------~~-----~~~l~k~l~~m 65 (942)
T KOG0973|consen 11 HNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKE--------------------EK-----NENLPKHLCTM 65 (942)
T ss_pred cCCeeEEEEEecCCceeEecCCccccccceeeccccccchhh--------------------hh-----hcccchhheee
Confidence 4467799999999999999999 899999998642110000 00 00012222334
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCC----------------CeEEEeEEEeCCCCcEEEEEEcCCCCEEE
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS----------------GQFECNATLEGHENEVKSVTWSKNGQFLA 150 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~----------------~~~~~~~~~~~~~~~v~~l~~~~~~~~l~ 150 (479)
..|.+.|+|+.|+|||++||+|+.|+.|.||.... .++.....+.+|...|..++|+|++.+|+
T Consensus 66 ~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lv 145 (942)
T KOG0973|consen 66 DDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLV 145 (942)
T ss_pred ccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEE
Confidence 68999999999999999999999999999999772 12557788999999999999999999999
Q ss_pred EEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC------C
Q psy14815 151 TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS------H 224 (479)
Q Consensus 151 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------~ 224 (479)
+++.|++|.+||.++. ..+..+.+|.+.|..+.|.|-|++|++-+.|++|++|.... |...+.+.. -
T Consensus 146 S~s~DnsViiwn~~tF---~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~d----w~i~k~It~pf~~~~~ 218 (942)
T KOG0973|consen 146 SVSLDNSVIIWNAKTF---ELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSD----WGIEKSITKPFEESPL 218 (942)
T ss_pred EecccceEEEEccccc---eeeeeeecccccccceEECCccCeeeeecCCceEEEEEccc----ceeeEeeccchhhCCC
Confidence 9999999999999988 77888999999999999999999999999999999999764 223333332 2
Q ss_pred CccEEEEEEccCCCEEEEeeC----CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCC-----C
Q psy14815 225 TSTVWSLAFDRIGSRLATCSD----DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL-----T 295 (479)
Q Consensus 225 ~~~v~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~-----~ 295 (479)
......+.|||||++|++... -.++.|.+- .+|+.-..+-|| ..++.++.|+|. .
T Consensus 219 ~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR---------------~tWk~~~~LvGH-~~p~evvrFnP~lfe~~~ 282 (942)
T KOG0973|consen 219 TTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIER---------------GTWKVDKDLVGH-SAPVEVVRFNPKLFERNN 282 (942)
T ss_pred cceeeecccCCCcCeecchhhccCCcceeEEEec---------------CCceeeeeeecC-CCceEEEEeChHHhcccc
Confidence 345789999999999998642 235666653 677888899998 669999999972 1
Q ss_pred C------------eEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 296 D------------LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 296 ~------------~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
+ .+|+|+.|++|.||...... ++.....-....|..++|||||..|
T Consensus 283 ~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~R---------Pl~vi~~lf~~SI~DmsWspdG~~L 340 (942)
T KOG0973|consen 283 KNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPR---------PLFVIHNLFNKSIVDMSWSPDGFSL 340 (942)
T ss_pred ccCCccCCCcceEEEEEecCCccEEEEecCCCC---------chhhhhhhhcCceeeeeEcCCCCeE
Confidence 1 68899999999999987765 3433334456789999999999987
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.1e-30 Score=215.10 Aligned_cols=296 Identities=16% Similarity=0.231 Sum_probs=215.6
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
.+.+|+||.+.|++++|+.||++|+|++.|++|+||++........- ..+
T Consensus 78 ~~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr------------------------------~~R 127 (420)
T KOG2096|consen 78 NVSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHR------------------------------CIR 127 (420)
T ss_pred hhhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhh------------------------------Hhh
Confidence 35689999999999999999999999999999999998753321100 000
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEE-ECCCeEEEEECCCCe---EE-------EeEEEeCCCCcEEEEEEcCCCCEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASA-SFDATTAVWDKRSGQ---FE-------CNATLEGHENEVKSVTWSKNGQFLAT 151 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~-~~dg~i~iwd~~~~~---~~-------~~~~~~~~~~~v~~l~~~~~~~~l~~ 151 (479)
. .-.-+-.+.+.|.||-+-++.. -...++++|.+...+ .. ....-+.|.-.+..+-....+.+|++
T Consensus 128 ~---nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~ims 204 (420)
T KOG2096|consen 128 Q---NVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMS 204 (420)
T ss_pred c---cccCCCceEEEECCCcceEEEEEccCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEE
Confidence 0 1112356788999987655544 445689999764321 10 01112335566777777778899999
Q ss_pred EeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcc----cceEeeeeecCCCcc
Q psy14815 152 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE----ADWINFATLKSHTST 227 (479)
Q Consensus 152 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~~~~ 227 (479)
++.|..|.+|+++. +.+..+......-+..+.+|+|+++++++..-.|++|..--.+ .....+.++.+|.+.
T Consensus 205 as~dt~i~lw~lkG----q~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~sa 280 (420)
T KOG2096|consen 205 ASLDTKICLWDLKG----QLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSA 280 (420)
T ss_pred ecCCCcEEEEecCC----ceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhh
Confidence 99999999999994 4555666666667788999999999999999999999864322 122346788999999
Q ss_pred EEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEE----EeccccccEEEEEecCCCCeEEEEeC
Q psy14815 228 VWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT----LSGHHGRTIYDISWCHLTDLIATACG 303 (479)
Q Consensus 228 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~l~~~~~~~~l~~~~~ 303 (479)
|..++|+++...+++.+.||++++||+.-...... ..+.+.+ +... +..-..++.+|+|+.|+.+.
T Consensus 281 V~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~q--------Dpk~Lk~g~~pl~aa-g~~p~RL~lsP~g~~lA~s~- 350 (420)
T KOG2096|consen 281 VLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQ--------DPKILKEGSAPLHAA-GSEPVRLELSPSGDSLAVSF- 350 (420)
T ss_pred eeeeeeCCCcceeEEEecCCcEEEeeccceEecCC--------CchHhhcCCcchhhc-CCCceEEEeCCCCcEEEeec-
Confidence 99999999999999999999999999754322111 0011111 1111 33344899999999988765
Q ss_pred CCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 304 DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 304 dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
...+++|..+.++ ....+...|...|.+++|+|+|+++++.+
T Consensus 351 gs~l~~~~se~g~---------~~~~~e~~h~~~Is~is~~~~g~~~atcG 392 (420)
T KOG2096|consen 351 GSDLKVFASEDGK---------DYPELEDIHSTTISSISYSSDGKYIATCG 392 (420)
T ss_pred CCceEEEEcccCc---------cchhHHHhhcCceeeEEecCCCcEEeeec
Confidence 4689999998877 34445568999999999999999998764
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-30 Score=229.29 Aligned_cols=270 Identities=19% Similarity=0.287 Sum_probs=221.7
Q ss_pred ccceEEEEECCCCCe-EEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 11 QGRVWNVSWNPQGTM-ISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~-l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
.+.|++++|+|...+ +|+.+ .-.+.||+..+....+++ ...
T Consensus 26 ~~~vssl~fsp~~P~d~aVt~-S~rvqly~~~~~~~~k~~-------------------------------------srF 67 (487)
T KOG0310|consen 26 HNSVSSLCFSPKHPYDFAVTS-SVRVQLYSSVTRSVRKTF-------------------------------------SRF 67 (487)
T ss_pred cCcceeEecCCCCCCceEEec-ccEEEEEecchhhhhhhH-------------------------------------Hhh
Confidence 468999999996553 44444 346999998877766654 345
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEEeCCCCc
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vwd~~~~~~ 168 (479)
.+.+.++.|..||++++.|...|.|+|+|+.+.. .+..+.+|+.+|..+.|+| ++..+++|+.|+.+++||+.+.
T Consensus 68 k~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~--iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a-- 143 (487)
T KOG0310|consen 68 KDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRV--ILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTA-- 143 (487)
T ss_pred ccceeEEEeecCCeEEEccCCcCcEEEeccccHH--HHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCc--
Confidence 7889999999999999999999999999976643 5678899999999999999 5567888899999999999987
Q ss_pred eeeeeeeeccccceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCC
Q psy14815 169 YECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 247 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 247 (479)
.....+.+|...|+|.+|+|. +..+++|+.||.|++||.+.... .+.++ .|..+|.++.+-|.|..+++++. .
T Consensus 144 -~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~---~v~el-nhg~pVe~vl~lpsgs~iasAgG-n 217 (487)
T KOG0310|consen 144 -YVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTS---RVVEL-NHGCPVESVLALPSGSLIASAGG-N 217 (487)
T ss_pred -EEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCc---eeEEe-cCCCceeeEEEcCCCCEEEEcCC-C
Confidence 345678999999999999994 56899999999999999997642 24444 58999999999999999999985 4
Q ss_pred eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEE
Q psy14815 248 TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLV 327 (479)
Q Consensus 248 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~ 327 (479)
.|++||+..+.+ .+..+..| ...|+|+.+..++..|++|+-|+.+++||+..-+ ..
T Consensus 218 ~vkVWDl~~G~q--------------ll~~~~~H-~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~K---------vv 273 (487)
T KOG0310|consen 218 SVKVWDLTTGGQ--------------LLTSMFNH-NKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYK---------VV 273 (487)
T ss_pred eEEEEEecCCce--------------ehhhhhcc-cceEEEEEeecCCceEeecccccceEEEEccceE---------EE
Confidence 699999965543 23444445 7799999999999999999999999999977655 44
Q ss_pred eccccccccceeEEEecCCCCCCCccc
Q psy14815 328 HTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 328 ~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
... ...++|.+++.+|+++.++.+.
T Consensus 274 ~s~--~~~~pvLsiavs~dd~t~viGm 298 (487)
T KOG0310|consen 274 HSW--KYPGPVLSIAVSPDDQTVVIGM 298 (487)
T ss_pred Eee--ecccceeeEEecCCCceEEEec
Confidence 443 4578999999999999886654
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-29 Score=238.73 Aligned_cols=253 Identities=17% Similarity=0.312 Sum_probs=189.8
Q ss_pred cccccccceEEEEECC-CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEE
Q psy14815 6 TLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAI 84 (479)
Q Consensus 6 ~l~~h~~~V~~l~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~ 84 (479)
.|.||.+.|++++|+| ++++|++|+.|++|++||+.++...... .....
T Consensus 70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~------------------------------~~~l~ 119 (493)
T PTZ00421 70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNI------------------------------SDPIV 119 (493)
T ss_pred eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCcccccc------------------------------CcceE
Confidence 4789999999999999 8899999999999999998754321110 00111
Q ss_pred eccccCCcEEEEEECCCC-CEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 85 LSDGHQRTIRETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
...+|...|.+++|+|++ ++|++++.|++|+|||+++++ ....+.+|...|.+++|+|++.+|++++.|+.|++||+
T Consensus 120 ~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~--~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~ 197 (493)
T PTZ00421 120 HLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGK--AVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDP 197 (493)
T ss_pred EecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCe--EEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEEC
Confidence 236899999999999975 799999999999999999886 56778889999999999999999999999999999999
Q ss_pred CCCCceeeeeeeeccccc-eeEEEEecCCCEEEEEE----cCCcEEEEecCCcccceEeeeeecC-CCccEEEEEEccCC
Q psy14815 164 GEEDEYECAAVINAHIQD-VKKVRFHPFDNILASAS----YDDTVKLFKEDKAEADWINFATLKS-HTSTVWSLAFDRIG 237 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~-v~~l~~~~~~~~l~~~~----~dg~i~i~d~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~ 237 (479)
+++ ..+..+..|... ...+.|.+++..+++++ .|+.|++||+++... +...... +...+....|++++
T Consensus 198 rsg---~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~---p~~~~~~d~~~~~~~~~~d~d~ 271 (493)
T PTZ00421 198 RDG---TIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMAS---PYSTVDLDQSSALFIPFFDEDT 271 (493)
T ss_pred CCC---cEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCC---ceeEeccCCCCceEEEEEcCCC
Confidence 987 445566777654 44678888887777665 478999999987553 2222222 33456667899999
Q ss_pred CEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccC
Q psy14815 238 SRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 313 (479)
Q Consensus 238 ~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~ 313 (479)
++|++++ .|+.|++||+.... +..........++..++|.|.-..=+.. --..|+|.+.
T Consensus 272 ~~L~lggkgDg~Iriwdl~~~~---------------~~~~~~~~s~~~~~g~~~~pk~~~dv~~--~Ei~r~~~l~ 331 (493)
T PTZ00421 272 NLLYIGSKGEGNIRCFELMNER---------------LTFCSSYSSVEPHKGLCMMPKWSLDTRK--CEIARFYALT 331 (493)
T ss_pred CEEEEEEeCCCeEEEEEeeCCc---------------eEEEeeccCCCCCcceEecccccccccc--eeeeEEEEec
Confidence 9998887 59999999996542 2333333335677888888853221111 1234666654
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=224.16 Aligned_cols=250 Identities=21% Similarity=0.299 Sum_probs=211.3
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
.+++.-..+.|.++.|-.||++|+.|+..|.|+|+|+.+...+..+
T Consensus 61 ~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~---------------------------------- 106 (487)
T KOG0310|consen 61 RKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQL---------------------------------- 106 (487)
T ss_pred hhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHH----------------------------------
Confidence 3455566789999999999999999999999999997654444443
Q ss_pred EeccccCCcEEEEEECCC-CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEE
Q psy14815 84 ILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVW 161 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vw 161 (479)
.+|..++..+.|+|+ +..+++|+.|+.+++||+.+.. ....+.+|++.|.|.+|+| ++..+++|+.||.|++|
T Consensus 107 ---~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~--v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~ 181 (487)
T KOG0310|consen 107 ---YAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAY--VQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLW 181 (487)
T ss_pred ---hhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcE--EEEEecCCcceeEeeccccCCCeEEEecCCCceEEEE
Confidence 689999999999994 5678888999999999999886 3668899999999999999 56689999999999999
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 241 (479)
|++... ..+.. -.|..+|..+.+-|.|..+++++.+ .|++||+.++.. .+.....|...|+|+.+..++..|+
T Consensus 182 DtR~~~--~~v~e-lnhg~pVe~vl~lpsgs~iasAgGn-~vkVWDl~~G~q---ll~~~~~H~KtVTcL~l~s~~~rLl 254 (487)
T KOG0310|consen 182 DTRSLT--SRVVE-LNHGCPVESVLALPSGSLIASAGGN-SVKVWDLTTGGQ---LLTSMFNHNKTVTCLRLASDSTRLL 254 (487)
T ss_pred EeccCC--ceeEE-ecCCCceeeEEEcCCCCEEEEcCCC-eEEEEEecCCce---ehhhhhcccceEEEEEeecCCceEe
Confidence 999874 22223 3588999999999999999988754 799999997663 3555566999999999999999999
Q ss_pred EeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 242 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 242 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+++-|+.|++||+ .+++.+..+.. .++|.+++.+|+++.++.|..||.+.+=+....+
T Consensus 255 S~sLD~~VKVfd~---------------t~~Kvv~s~~~--~~pvLsiavs~dd~t~viGmsnGlv~~rr~~~k~ 312 (487)
T KOG0310|consen 255 SGSLDRHVKVFDT---------------TNYKVVHSWKY--PGPVLSIAVSPDDQTVVIGMSNGLVSIRRREVKK 312 (487)
T ss_pred ecccccceEEEEc---------------cceEEEEeeec--ccceeeEEecCCCceEEEecccceeeeehhhccc
Confidence 9999999999997 55677777776 6799999999999999999999998777555544
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=224.32 Aligned_cols=273 Identities=21% Similarity=0.393 Sum_probs=216.6
Q ss_pred ccccceEEEEECCCCC-eEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecc
Q psy14815 9 GHQGRVWNVSWNPQGT-MISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSD 87 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~-~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~ 87 (479)
-|.+.|+.+.+.|+.. .+||.+..+.|.|||..+..-.....+ .......+.
T Consensus 122 ~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~---------------------------~~~Pdl~L~ 174 (422)
T KOG0264|consen 122 NHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASG---------------------------ECRPDLRLK 174 (422)
T ss_pred cCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccc---------------------------cCCCceEEE
Confidence 4889999999999654 567778889999999765433222110 011222346
Q ss_pred ccCCcEEEEEECCC-CCEEEEEECCCeEEEEECCCCe-----EEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEE
Q psy14815 88 GHQRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQ-----FECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWV 160 (479)
Q Consensus 88 ~~~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~v 160 (479)
+|.+.-++++|++. .-.|++++.|++|++||+.... ......+.+|...|..++|++ +...|++++.|+.+.+
T Consensus 175 gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~i 254 (422)
T KOG0264|consen 175 GHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMI 254 (422)
T ss_pred eecccccccccccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEE
Confidence 78887888999984 4689999999999999997543 235677899999999999999 6678999999999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC-C
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-S 238 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~ 238 (479)
||+|+. ..+......+|..++.|++|+| ++..||+|+.|++|.+||+|+... ++.++.+|...|.++.|+|.. .
T Consensus 255 wD~R~~-~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~---~lh~~e~H~dev~~V~WSPh~et 330 (422)
T KOG0264|consen 255 WDTRSN-TSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNK---PLHTFEGHEDEVFQVEWSPHNET 330 (422)
T ss_pred EEcCCC-CCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhccc---CceeccCCCcceEEEEeCCCCCc
Confidence 999974 4466777889999999999999 668899999999999999998764 688999999999999999975 5
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC-eEEEEeCCCeEEEcccCC
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENP 314 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~~dg~i~vw~~~~ 314 (479)
.|++++.|+.+.+||+..-+.... +....+...+++..-.|| ...|..+.|+|... .|++.++|+.+.||++..
T Consensus 331 vLASSg~D~rl~vWDls~ig~eq~-~eda~dgppEllF~HgGH-~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~ 405 (422)
T KOG0264|consen 331 VLASSGTDRRLNVWDLSRIGEEQS-PEDAEDGPPELLFIHGGH-TAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE 405 (422)
T ss_pred eeEecccCCcEEEEeccccccccC-hhhhccCCcceeEEecCc-ccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence 678899999999999987665443 111122334566777787 88999999999877 577889999999998874
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=204.40 Aligned_cols=246 Identities=20% Similarity=0.326 Sum_probs=209.6
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
.+++++.||...|..++.+.|...|++|+.|..+.+||+++|+.+.++
T Consensus 50 ~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~-------------------------------- 97 (307)
T KOG0316|consen 50 ALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRF-------------------------------- 97 (307)
T ss_pred ceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeec--------------------------------
Confidence 368999999999999999999999999999999999999999988776
Q ss_pred eEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14815 82 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vw 161 (479)
.+|...|+.++|+.+...+++|+.|.++++||-++...++++.+......|.++..+ +..+++|+.||+++.|
T Consensus 98 -----rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~heIvaGS~DGtvRty 170 (307)
T KOG0316|consen 98 -----RGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EHEIVAGSVDGTVRTY 170 (307)
T ss_pred -----ccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec--ccEEEeeccCCcEEEE
Confidence 689999999999999999999999999999999999888999998888999999986 5689999999999999
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccE--EEEEEccCCCE
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTV--WSLAFDRIGSR 239 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~ 239 (479)
|++.+. ..... -..+|+|++|+++++..++++-|+++++.|-.+++. +..+.+|.+.= ...+++....+
T Consensus 171 diR~G~---l~sDy--~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGkl----L~sYkGhkn~eykldc~l~qsdth 241 (307)
T KOG0316|consen 171 DIRKGT---LSSDY--FGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKL----LKSYKGHKNMEYKLDCCLNQSDTH 241 (307)
T ss_pred Eeecce---eehhh--cCCcceeEEecCCCCEEEEeeccceeeecccchhHH----HHHhcccccceeeeeeeeccccee
Confidence 999883 33222 346899999999999999999999999999998875 77788887643 45567777889
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcc
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~ 311 (479)
+++|++||.|++||+... ..+..+..+..-.|.+++++|.-..++++.. +.+..|.
T Consensus 242 V~sgSEDG~Vy~wdLvd~---------------~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~-~~~~~~~ 297 (307)
T KOG0316|consen 242 VFSGSEDGKVYFWDLVDE---------------TQISKLSVVSTVIVTDLSCHPTMDDFITATG-HGDLFWY 297 (307)
T ss_pred EEeccCCceEEEEEeccc---------------eeeeeeccCCceeEEeeecccCccceeEecC-Cceecee
Confidence 999999999999999544 3345555553334899999998877777764 4555664
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=213.07 Aligned_cols=248 Identities=19% Similarity=0.344 Sum_probs=212.0
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+-+|.||.+.|++...+.+...-|+++.|-+-++||.-+|..+.++
T Consensus 52 igtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf---------------------------------- 97 (334)
T KOG0278|consen 52 IGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSF---------------------------------- 97 (334)
T ss_pred EEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhh----------------------------------
Confidence 4689999999999999999999999999999999999888887765
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
.|..-|.+++|+.|.++|++|+.+..++|+|++..+ -+...+.+|.+.|..+.|....+.|++.+.|++||+||.
T Consensus 98 ----~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~-App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~ 172 (334)
T KOG0278|consen 98 ----EHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPK-APPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDH 172 (334)
T ss_pred ----hhhheeeeEEecccchhhhccchHHHhhhhhccCCC-CCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEe
Confidence 578889999999999999999999999999998876 356678899999999999998899999999999999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
+++. .++.+. ...+|+++.++++|++|.++ ..+.|.+||..+... ++... ....|.+..++|+...+++|
T Consensus 173 rTgt---~v~sL~-~~s~VtSlEvs~dG~ilTia-~gssV~Fwdaksf~~----lKs~k-~P~nV~SASL~P~k~~fVaG 242 (334)
T KOG0278|consen 173 RTGT---EVQSLE-FNSPVTSLEVSQDGRILTIA-YGSSVKFWDAKSFGL----LKSYK-MPCNVESASLHPKKEFFVAG 242 (334)
T ss_pred ccCc---EEEEEe-cCCCCcceeeccCCCEEEEe-cCceeEEeccccccc----eeecc-CccccccccccCCCceEEec
Confidence 9984 344443 25679999999999866554 567899999986543 44333 45668899999999999999
Q ss_pred eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEE-eccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 244 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL-SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 244 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+.|..++.||...+.. +..+ ++| -++|.++.|+|+|...++||.||+|++|.+..++
T Consensus 243 ged~~~~kfDy~TgeE---------------i~~~nkgh-~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~ 300 (334)
T KOG0278|consen 243 GEDFKVYKFDYNTGEE---------------IGSYNKGH-FGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGK 300 (334)
T ss_pred CcceEEEEEeccCCce---------------eeecccCC-CCceEEEEECCCCceeeccCCCceEEEEEecCCC
Confidence 9999999999966543 3334 565 7799999999999999999999999999988776
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-29 Score=240.10 Aligned_cols=242 Identities=28% Similarity=0.445 Sum_probs=213.6
Q ss_pred cccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 6 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 6 ~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
.|.||.+.|+++++..-+.+|++|+.|.++++||+.+|++...+
T Consensus 244 ~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l------------------------------------ 287 (537)
T KOG0274|consen 244 RLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSL------------------------------------ 287 (537)
T ss_pred eccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEe------------------------------------
Confidence 48999999999999988889999999999999999999987776
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCC
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~ 165 (479)
.+|.+.|.++... ..++++|+.|.+|++|++++++ .+..+.+|.++|.++..+ +.++++|+.||+|++||+.+
T Consensus 288 -~gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~n~~--~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~ 360 (537)
T KOG0274|consen 288 -QGHTSSVRCLTID--PFLLVSGSRDNTVKVWDVTNGA--CLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRT 360 (537)
T ss_pred -cCCCceEEEEEcc--CceEeeccCCceEEEEeccCcc--eEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhh
Confidence 5789999998875 4578889999999999999987 677788899999999997 78999999999999999997
Q ss_pred CCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeC
Q psy14815 166 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 245 (479)
Q Consensus 166 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 245 (479)
. +++..+.+|...|.++.+.+. +.+++|+.|++|++||+++.. +++..+.+|.+-+.++.+. +++|++++.
T Consensus 361 ~---~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~---~c~~tl~~h~~~v~~l~~~--~~~Lvs~~a 431 (537)
T KOG0274|consen 361 G---KCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKR---KCIHTLQGHTSLVSSLLLR--DNFLVSSSA 431 (537)
T ss_pred c---eeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchh---hhhhhhcCCcccccccccc--cceeEeccc
Confidence 7 889999999999999988765 899999999999999999763 3588999999999777664 789999999
Q ss_pred CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 246 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 246 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
|++|++||.. ...+++++.+++...|..+++. ...+++++.||++++||+++++
T Consensus 432 D~~Ik~WD~~---------------~~~~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~ 485 (537)
T KOG0274|consen 432 DGTIKLWDAE---------------EGECLRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWDLRSGT 485 (537)
T ss_pred cccEEEeecc---------------cCceeeeeccCCcccEEEeecC--cceEEEEecCCeeEEEecccCc
Confidence 9999999984 4466788887446788888876 4578889999999999999987
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-29 Score=231.12 Aligned_cols=242 Identities=24% Similarity=0.424 Sum_probs=208.4
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
...|+++.|+++|.+|++|..+|.|.|||....+.+..+. ..|.
T Consensus 217 ~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~------------------------------------~~h~ 260 (484)
T KOG0305|consen 217 EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLR------------------------------------GSHA 260 (484)
T ss_pred CCceEEEEECCCCCEEEEeecCCeEEEEehhhcccccccc------------------------------------CCcC
Confidence 7899999999999999999999999999988776665542 2389
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCcee
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 170 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 170 (479)
..|.+++|+ +..+.+|+.|+.|..+|++..+.... .+.+|...|..+.|++|+.++++|+.|+.+.|||.... .
T Consensus 261 ~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~-~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~---~ 334 (484)
T KOG0305|consen 261 SRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVS-TLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSP---E 334 (484)
T ss_pred ceeEEEecc--CceEEEecCCCcEEEEEEecchhhhh-hhhcccceeeeeEECCCCCeeccCCCccceEeccCCCc---c
Confidence 999999998 67899999999999999998863323 58899999999999999999999999999999999665 6
Q ss_pred eeeeeeccccceeEEEEec-CCCEEEEEE--cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe--eC
Q psy14815 171 CAAVINAHIQDVKKVRFHP-FDNILASAS--YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC--SD 245 (479)
Q Consensus 171 ~~~~~~~~~~~v~~l~~~~-~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~--~~ 245 (479)
....+..|...|..++|+| ...+||+|+ .|+.|++||..++.. +... .-.++|.++.|++..+.|+++ ..
T Consensus 335 p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~----i~~v-dtgsQVcsL~Wsk~~kEi~sthG~s 409 (484)
T KOG0305|consen 335 PKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGAR----IDSV-DTGSQVCSLIWSKKYKELLSTHGYS 409 (484)
T ss_pred ccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcE----eccc-ccCCceeeEEEcCCCCEEEEecCCC
Confidence 6677889999999999999 668899876 699999999997663 3333 356889999999998877764 45
Q ss_pred CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCC
Q psy14815 246 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 246 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
++.|.||+... .+.+..+.+| ...|..++++|||..+++|+.|.++++|++-..
T Consensus 410 ~n~i~lw~~ps---------------~~~~~~l~gH-~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 410 ENQITLWKYPS---------------MKLVAELLGH-TSRVLYLALSPDGETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred CCcEEEEeccc---------------cceeeeecCC-cceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence 77899999833 3567888897 778999999999999999999999999998764
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-28 Score=206.86 Aligned_cols=274 Identities=12% Similarity=0.153 Sum_probs=215.4
Q ss_pred cccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
-.+.|++|.|+|.+..|+.++.||++++||+...+.... ..|
T Consensus 12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~--------------------------------------~~~ 53 (323)
T KOG1036|consen 12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLK--------------------------------------FKH 53 (323)
T ss_pred ChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhh--------------------------------------eec
Confidence 468899999999999999999999999999876543332 368
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCce
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 169 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 169 (479)
..++.+++|.+ ...+++|+.||.|+.+|+.+++ ...+..|..++.|+.+++....+++|+.|++|++||.+..
T Consensus 54 ~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~---~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~--- 126 (323)
T KOG1036|consen 54 GAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGN---EDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNK--- 126 (323)
T ss_pred CCceeeeeccC-CceEEEeccCceEEEEEecCCc---ceeeccCCCceEEEEeeccCCeEEEcccCccEEEEecccc---
Confidence 89999999987 4589999999999999999985 4566779999999999998889999999999999999974
Q ss_pred eeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeE
Q psy14815 170 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 249 (479)
Q Consensus 170 ~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i 249 (479)
.....+.. ...|.++..+ ++.|++|+.+..|.+||+++..... ...-.....++.++++-|++.-+++++-||.|
T Consensus 127 ~~~~~~d~-~kkVy~~~v~--g~~LvVg~~~r~v~iyDLRn~~~~~--q~reS~lkyqtR~v~~~pn~eGy~~sSieGRV 201 (323)
T KOG1036|consen 127 VVVGTFDQ-GKKVYCMDVS--GNRLVVGTSDRKVLIYDLRNLDEPF--QRRESSLKYQTRCVALVPNGEGYVVSSIEGRV 201 (323)
T ss_pred cccccccc-CceEEEEecc--CCEEEEeecCceEEEEEcccccchh--hhccccceeEEEEEEEecCCCceEEEeecceE
Confidence 22223322 3367777765 7899999999999999999876422 12223455678999999988889999999998
Q ss_pred EEEeccCCCCCCCCCCCCCCCceEEEEEEecc--------ccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCc
Q psy14815 250 KIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH--------HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDM 321 (479)
Q Consensus 250 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 321 (479)
.+=.+......+ +....|+.| ...||++++|+|-.+.|+||+.||.|.+||...++
T Consensus 202 avE~~d~s~~~~-----------skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rK----- 265 (323)
T KOG1036|consen 202 AVEYFDDSEEAQ-----------SKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRK----- 265 (323)
T ss_pred EEEccCCchHHh-----------hhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCcchh-----
Confidence 776554431111 112233333 13489999999999999999999999999999987
Q ss_pred eeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 322 VSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 322 ~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.+..+ ......|.+++|+.||..||.+.
T Consensus 266 ----rl~q~-~~~~~SI~slsfs~dG~~LAia~ 293 (323)
T KOG1036|consen 266 ----RLKQL-AKYETSISSLSFSMDGSLLAIAS 293 (323)
T ss_pred ----hhhhc-cCCCCceEEEEeccCCCeEEEEe
Confidence 33343 33456799999999999998876
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-28 Score=216.22 Aligned_cols=252 Identities=25% Similarity=0.362 Sum_probs=211.5
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
.+.+|+||...|+.+.|+|+...+++++.|-.|+||........
T Consensus 253 ~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~------------------------------------ 296 (506)
T KOG0289|consen 253 ILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEP------------------------------------ 296 (506)
T ss_pred hhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCc------------------------------------
Confidence 46789999999999999999999999999999999987543322
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd 162 (479)
.....|..+|+.+..+|.|.||++++.|++..+.|++++.......-+...-.+++.+|+|||..|.+|..||.+++||
T Consensus 297 -~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwd 375 (506)
T KOG0289|consen 297 -TSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWD 375 (506)
T ss_pred -cccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEE
Confidence 1236799999999999999999999999999999999997544444333345689999999999999999999999999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC-CCccEEEEEEccCCCEEE
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS-HTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~ 241 (479)
+.+. .....+.+|.++|+.++|+.+|-+|+++++|+.|++||+|+.+. +.++.. ...++.++.|.+.|++|+
T Consensus 376 lks~---~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n----~kt~~l~~~~~v~s~~fD~SGt~L~ 448 (506)
T KOG0289|consen 376 LKSQ---TNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKN----FKTIQLDEKKEVNSLSFDQSGTYLG 448 (506)
T ss_pred cCCc---cccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcc----cceeeccccccceeEEEcCCCCeEE
Confidence 9987 45677899999999999999999999999999999999997663 333322 223799999999999999
Q ss_pred EeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 242 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 242 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
.++.|=.|++++- . .+.|.++..+..| .+..+.+.|....++++++|.|..++++.+
T Consensus 449 ~~g~~l~Vy~~~k--~-----------~k~W~~~~~~~~~-sg~st~v~Fg~~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 449 IAGSDLQVYICKK--K-----------TKSWTEIKELADH-SGLSTGVRFGEHAQYLASTSMDAILRLYAL 505 (506)
T ss_pred eecceeEEEEEec--c-----------cccceeeehhhhc-ccccceeeecccceEEeeccchhheEEeec
Confidence 9987766666652 1 2567888888876 678899999999999999999999988754
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-29 Score=206.47 Aligned_cols=264 Identities=15% Similarity=0.207 Sum_probs=207.8
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
.+-++.||++.|+|+..+.+.++++||+.|.++++||+++|+++..+
T Consensus 44 rlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~--------------------------------- 90 (327)
T KOG0643|consen 44 RLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATW--------------------------------- 90 (327)
T ss_pred eeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEe---------------------------------
Confidence 35689999999999999999999999999999999999999987665
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEEC-----CCeEEEEECCCCe-----EEEeEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASF-----DATTAVWDKRSGQ-----FECNATLEGHENEVKSVTWSKNGQFLATC 152 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~-----dg~i~iwd~~~~~-----~~~~~~~~~~~~~v~~l~~~~~~~~l~~~ 152 (479)
....+|..+.|+++|++++.+.. .+.|.++|++... .++...+..+.+.++.+-|.|-++.|++|
T Consensus 91 -----k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~G 165 (327)
T KOG0643|consen 91 -----KTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAG 165 (327)
T ss_pred -----ecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEe
Confidence 34578999999999998887754 3689999987321 13567777888999999999999999999
Q ss_pred eCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEE
Q psy14815 153 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLA 232 (479)
Q Consensus 153 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 232 (479)
..||.|..||++++. +.+.....|...|+.++++|+..++++++.|.+-++||.++.. .++++. -..+|++.+
T Consensus 166 he~G~is~~da~~g~--~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~----v~Kty~-te~PvN~aa 238 (327)
T KOG0643|consen 166 HEDGSISIYDARTGK--ELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLE----VLKTYT-TERPVNTAA 238 (327)
T ss_pred cCCCcEEEEEcccCc--eeeechhhhccccccccccCCcceEEecccCccceeeecccee----eEEEee-eccccccee
Confidence 999999999999875 4556667889999999999999999999999999999999654 344443 467899999
Q ss_pred EccCCCEEEEeeCCCeEEEE--eccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEc
Q psy14815 233 FDRIGSRLATCSDDATVKIW--KEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 310 (479)
Q Consensus 233 ~~~~~~~l~s~~~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw 310 (479)
++|...+++.|+.....-+- +.+.++-...+.. ....+.+..+++| -++|++++|+|+|+..++|++||.|++.
T Consensus 239 isP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh---~i~eEEigrvkGH-FGPINsvAfhPdGksYsSGGEDG~VR~h 314 (327)
T KOG0643|consen 239 ISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYH---LIFEEEIGRVKGH-FGPINSVAFHPDGKSYSSGGEDGYVRLH 314 (327)
T ss_pred cccccceEEecCCceeeeeeeecccccchhhhHHH---HHHHHHhcccccc-ccCcceeEECCCCcccccCCCCceEEEE
Confidence 99988888777643322221 1111110000000 0001234567787 7799999999999999999999999998
Q ss_pred ccCCC
Q psy14815 311 KENPE 315 (479)
Q Consensus 311 ~~~~~ 315 (479)
..+..
T Consensus 315 ~Fd~~ 319 (327)
T KOG0643|consen 315 HFDSN 319 (327)
T ss_pred Eeccc
Confidence 76653
|
|
| >PRK10799 metal-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.2e-31 Score=229.40 Aligned_cols=118 Identities=19% Similarity=0.261 Sum_probs=110.1
Q ss_pred ccHHHHHHHHHHhCCCccCCCCCcceeeeccCCCcCcccEEEEEecCCHHHHHHHHHcCCCEEEEeCCCCcccccccCcC
Q psy14815 355 LTLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIAYHPPIFAPLKRVTND 434 (479)
Q Consensus 355 ~~~~~~~~~l~~~~p~~~a~~wd~~Gl~v~~~~~~~~v~~il~~~d~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~ 434 (479)
|...++++.+++..|...+++|||+|+|++.. .+|++|++|+|+|++++++|+++|||+||+|||+||+|.+++ ..
T Consensus 1 m~~~~~~~~~~~~~~~~~~~~wd~~Gl~v~~~---~~v~~I~~alD~t~~vi~~A~~~~~dlIitHHP~~~~~~~~~-~~ 76 (247)
T PRK10799 1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGR---ETVQKIVTGVTASQALLDEAVRLQADAVIVHHGYFWKGESPV-IR 76 (247)
T ss_pred CcHHHHHHHHHhhcCHhhhccCCCceeEeCCc---ccccEEEEEeCCCHHHHHHHHHCCCCEEEECCchhccCCCcc-cc
Confidence 34679999999999999999999999999643 589999999999999999999999999999999999998887 46
Q ss_pred ChhhHHHHHHHhcCceEEeccccccccCC-CccccCCCcCCCC
Q psy14815 435 KWKERVVSTCLAHNIAVYSPHTTWDAIQE-GRTKKAPPEVQVP 476 (479)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~h~~~d~~~~-g~~~~~~~~~~~~ 476 (479)
+++++++++|++++|+|||+|||||++++ |+|++||++||+.
T Consensus 77 ~~~~~~~~~li~~~i~vy~~Htn~D~~~~~G~n~~la~~Lgl~ 119 (247)
T PRK10799 77 GMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGIT 119 (247)
T ss_pred chHHHHHHHHHHCCCeEEEEecchhhCCCCCHHHHHHHHcCCC
Confidence 68999999999999999999999999996 9999999999986
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-27 Score=229.24 Aligned_cols=241 Identities=16% Similarity=0.311 Sum_probs=178.2
Q ss_pred ccccccccccceEEEEECCC-CCeEEEeeCCCcEEEEecccccc-cccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQ-GTMISSCGEDKNIRLWVMVIREP-YEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~-~~~l~t~~~dg~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
++..|.+|.+.|++++|+|+ +.+|+||+.||+|+|||+.++.. ...+ .
T Consensus 66 ~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i------------------------------~ 115 (568)
T PTZ00420 66 PVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEI------------------------------K 115 (568)
T ss_pred eEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCcccccc------------------------------c
Confidence 34678999999999999996 78999999999999999875432 1110 0
Q ss_pred eeEEeccccCCcEEEEEECCCCCE-EEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNF-IASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 159 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~-l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~ 159 (479)
.......+|...|.+++|+|++.. +++++.|++|++||+++++ ....+. |...|.+++|+|+|.+|++++.|+.|+
T Consensus 116 ~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~--~~~~i~-~~~~V~SlswspdG~lLat~s~D~~Ir 192 (568)
T PTZ00420 116 DPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEK--RAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMH 192 (568)
T ss_pred cceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCc--EEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEE
Confidence 011123578999999999998875 5789999999999999886 344454 567899999999999999999999999
Q ss_pred EEEeCCCCceeeeeeeeccccceeE-----EEEecCCCEEEEEEcCC----cEEEEecCCcccceEeeeeecCCCccEEE
Q psy14815 160 VWEVGEEDEYECAAVINAHIQDVKK-----VRFHPFDNILASASYDD----TVKLFKEDKAEADWINFATLKSHTSTVWS 230 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~~~~~v~~-----l~~~~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~~~~~v~~ 230 (479)
+||++++ ..+..+.+|.+.+.+ ..|++++.+|++++.++ .|++||++.... ......+..+.+.+..
T Consensus 193 IwD~Rsg---~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~-pl~~~~ld~~~~~L~p 268 (568)
T PTZ00420 193 IIDPRKQ---EIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTS-ALVTMSIDNASAPLIP 268 (568)
T ss_pred EEECCCC---cEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCC-ceEEEEecCCccceEE
Confidence 9999987 455667788776433 23458889999988774 799999996432 1222234444455544
Q ss_pred EEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCC
Q psy14815 231 LAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 295 (479)
Q Consensus 231 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~ 295 (479)
....+++.++++|+.|+.|++|++..... ..+..+. +..++..++|.|..
T Consensus 269 ~~D~~tg~l~lsGkGD~tIr~~e~~~~~~-------------~~l~~~~--s~~p~~g~~f~Pkr 318 (568)
T PTZ00420 269 HYDESTGLIYLIGKGDGNCRYYQHSLGSI-------------RKVNEYK--SCSPFRSFGFLPKQ 318 (568)
T ss_pred eeeCCCCCEEEEEECCCeEEEEEccCCcE-------------Eeecccc--cCCCccceEEcccc
Confidence 44456688899999999999999854311 1122222 35678888898864
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-28 Score=236.42 Aligned_cols=269 Identities=21% Similarity=0.393 Sum_probs=207.9
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+-++..|.+.|+|+.|+|||++||+||+|+.|.||+... ......-+ +.+.... .+.+....
T Consensus 62 l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~-~~~~~~fg--------s~g~~~~---------vE~wk~~~ 123 (942)
T KOG0973|consen 62 LCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAE-IGSGTVFG--------STGGAKN---------VESWKVVS 123 (942)
T ss_pred heeeccccCceeEEEECCCCCeEeeccCcceEEEeeecc-cCCccccc--------ccccccc---------cceeeEEE
Confidence 446678999999999999999999999999999998753 11111100 0000111 12223333
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
.+.+|...|..++|+|++.+|++++.|++|.|||..+.+ .+..+++|.+.|..+.|.|-|++|++-+.|++|++|++
T Consensus 124 -~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~--~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt 200 (942)
T KOG0973|consen 124 -ILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFE--LLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRT 200 (942)
T ss_pred -EEecCCCccceeccCCCccEEEEecccceEEEEccccce--eeeeeecccccccceEECCccCeeeeecCCceEEEEEc
Confidence 347899999999999999999999999999999998884 78899999999999999999999999999999999997
Q ss_pred CCCCceeeeeeeecc------ccceeEEEEecCCCEEEEEEc----CCcEEEEecCCcccceEeeeeecCCCccEEEEEE
Q psy14815 164 GEEDEYECAAVINAH------IQDVKKVRFHPFDNILASASY----DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF 233 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~------~~~v~~l~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~ 233 (479)
.+. .....+..+ ...++.+.|+|||.+|++... -.++.|.+.. .|..-..+-+|..++.++.|
T Consensus 201 ~dw---~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~----tWk~~~~LvGH~~p~evvrF 273 (942)
T KOG0973|consen 201 SDW---GIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERG----TWKVDKDLVGHSAPVEVVRF 273 (942)
T ss_pred ccc---eeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecC----CceeeeeeecCCCceEEEEe
Confidence 764 233333222 224678999999999998742 3357787775 45557788999999999999
Q ss_pred ccC-------------CC----EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC
Q psy14815 234 DRI-------------GS----RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 296 (479)
Q Consensus 234 ~~~-------------~~----~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~ 296 (479)
+|. .+ .+|+|+.|++|-||....+ +++.....-....|.+++|+|||-
T Consensus 274 nP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~---------------RPl~vi~~lf~~SI~DmsWspdG~ 338 (942)
T KOG0973|consen 274 NPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALP---------------RPLFVIHNLFNKSIVDMSWSPDGF 338 (942)
T ss_pred ChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCC---------------CchhhhhhhhcCceeeeeEcCCCC
Confidence 972 11 5789999999999997433 223333333466899999999999
Q ss_pred eEEEEeCCCeEEEcccCCC
Q psy14815 297 LIATACGDDAIRIFKENPE 315 (479)
Q Consensus 297 ~l~~~~~dg~i~vw~~~~~ 315 (479)
.|+.+|.||+|.+..++..
T Consensus 339 ~LfacS~DGtV~~i~Fee~ 357 (942)
T KOG0973|consen 339 SLFACSLDGTVALIHFEEK 357 (942)
T ss_pred eEEEEecCCeEEEEEcchH
Confidence 9999999999999988654
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-27 Score=198.19 Aligned_cols=274 Identities=21% Similarity=0.432 Sum_probs=211.0
Q ss_pred cccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecc
Q psy14815 8 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSD 87 (479)
Q Consensus 8 ~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~ 87 (479)
.+|.+-|+|+.|.+.|+++|||+.|++|+|||..+..- .+.... .-.
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~--------------------------------~W~~Ts-~Wr 56 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSG--------------------------------TWSCTS-SWR 56 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCC--------------------------------ceEEee-eEE
Confidence 37999999999999999999999999999999643221 111111 125
Q ss_pred ccCCcEEEEEECC--CCCEEEEEECCCeEEEEECC-------CCeEEEeEEEeCCCCcEEEEEEcC--CCCEEEEEeCCC
Q psy14815 88 GHQRTIRETAWSP--CGNFIASASFDATTAVWDKR-------SGQFECNATLEGHENEVKSVTWSK--NGQFLATCSRDK 156 (479)
Q Consensus 88 ~~~~~v~~v~~~~--~~~~l~t~~~dg~i~iwd~~-------~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~~~~~dg 156 (479)
.|.+.|..+.|.+ -|+.+|+++.|+++.||.=. +.++....++......|+.++|.| -|-.|++++.||
T Consensus 57 ah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG 136 (361)
T KOG2445|consen 57 AHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADG 136 (361)
T ss_pred ecCCcEEEEEecCccccceEEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCc
Confidence 7999999999965 58999999999999999641 235566677777888999999999 577899999999
Q ss_pred cEEEEEeCCCC---ceeeeeeee-------ccccceeEEEEecC---CCEEEEEEcC-----CcEEEEecCCcccceEee
Q psy14815 157 SVWVWEVGEED---EYECAAVIN-------AHIQDVKKVRFHPF---DNILASASYD-----DTVKLFKEDKAEADWINF 218 (479)
Q Consensus 157 ~i~vwd~~~~~---~~~~~~~~~-------~~~~~v~~l~~~~~---~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~ 218 (479)
.+|||+.-... .+.....+. .+..+..|+.|+|. ..+|+.|+.+ +.+.||........+..+
T Consensus 137 ~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kv 216 (361)
T KOG2445|consen 137 ILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKV 216 (361)
T ss_pred EEEEEecCCccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeee
Confidence 99999876542 222222222 46677889999983 3678888766 579999988877778888
Q ss_pred eeecCCCccEEEEEEccCC----CEEEEeeCCCeEEEEeccCCCCCC---CCCCCC--CCCceEEEEEEeccccccEEEE
Q psy14815 219 ATLKSHTSTVWSLAFDRIG----SRLATCSDDATVKIWKEYKPGNSA---GIPTPD--NDSVWKCVCTLSGHHGRTIYDI 289 (479)
Q Consensus 219 ~~~~~~~~~v~~~~~~~~~----~~l~s~~~dg~i~iwd~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~i~~l 289 (479)
.++..|..+|++++|.|+- ..|++++.|| |+||.+....... +...+. .+-..+.+..+..| ...|..+
T Consensus 217 a~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H-~~~VWrv 294 (361)
T KOG2445|consen 217 AELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDH-NGEVWRV 294 (361)
T ss_pred hhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCC-CCceEEE
Confidence 8999999999999999963 5789999999 9999987532111 111111 11223455667776 8899999
Q ss_pred EecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 290 SWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 290 ~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
.|+-.|..|++.+.||.||+|...-..
T Consensus 295 ~wNmtGtiLsStGdDG~VRLWkany~n 321 (361)
T KOG2445|consen 295 RWNMTGTILSSTGDDGCVRLWKANYNN 321 (361)
T ss_pred EEeeeeeEEeecCCCceeeehhhhhhh
Confidence 999999999999999999999876654
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.7e-28 Score=203.01 Aligned_cols=248 Identities=17% Similarity=0.271 Sum_probs=201.3
Q ss_pred CcccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 1 ~~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
|.++..+..|.++|++++.+ +.++|+||.|-+|+|||+.+...+..+
T Consensus 33 l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~l------------------------------- 79 (362)
T KOG0294|consen 33 LKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGIL------------------------------- 79 (362)
T ss_pred eeccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhcce-------------------------------
Confidence 45678889999999999997 899999999999999999877766554
Q ss_pred eeEEeccccCCcEEEEEECCCCC--EEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcE
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGN--FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 158 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~--~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i 158 (479)
..|.+.|+++.|.+... .|++|+.||.|.+|+.. .++.+..+++|.+.|+.++.+|.+++.++.+.|+.+
T Consensus 80 ------l~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~--~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~l 151 (362)
T KOG0294|consen 80 ------LSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVG--SWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVL 151 (362)
T ss_pred ------eccccceEEEEecCCcchhheeeecCCCcEEEEEcC--CeEEeeeecccccccceeEecCCCceEEEEcCCcee
Confidence 46899999999998654 89999999999999975 457899999999999999999999999999999999
Q ss_pred EEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCC
Q psy14815 159 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS 238 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 238 (479)
+.||+-.++.-.+. .+ ....+.+.|+|.|.+++.+..+ .|-+|.+..... ...+. ....+.++.|. ++.
T Consensus 152 r~WNLV~Gr~a~v~-~L---~~~at~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~v----~~~i~-~~~r~l~~~~l-~~~ 220 (362)
T KOG0294|consen 152 RTWNLVRGRVAFVL-NL---KNKATLVSWSPQGDHFVVSGRN-KIDIYQLDNASV----FREIE-NPKRILCATFL-DGS 220 (362)
T ss_pred eeehhhcCccceee-cc---CCcceeeEEcCCCCEEEEEecc-EEEEEecccHhH----hhhhh-ccccceeeeec-CCc
Confidence 99999887532221 12 1223459999999998888876 589999886553 22222 22456777776 467
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEe--cCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW--CHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~--~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
.|++|++|+.|.+||... ..+...+.+| ...|-++.+ .|++.+|+++|.||.|+|||++...
T Consensus 221 ~L~vG~d~~~i~~~D~ds---------------~~~~~~~~AH-~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~~ 284 (362)
T KOG0294|consen 221 ELLVGGDNEWISLKDTDS---------------DTPLTEFLAH-ENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDMET 284 (362)
T ss_pred eEEEecCCceEEEeccCC---------------Cccceeeecc-hhheeeeEEEecCCceEEEEeccCceEEEEEccccc
Confidence 889999999999999754 2456778887 888999885 3678899999999999999998874
|
|
| >COG0327 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-30 Score=224.10 Aligned_cols=120 Identities=33% Similarity=0.530 Sum_probs=112.6
Q ss_pred ccHHHHHHHHHHhCCCccCCCCCcceeeeccCCCcCcccEEEEEecCCHHHHHHHHHcCCCEEEEeCCCCcccccccCcC
Q psy14815 355 LTLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIAYHPPIFAPLKRVTND 434 (479)
Q Consensus 355 ~~~~~~~~~l~~~~p~~~a~~wd~~Gl~v~~~~~~~~v~~il~~~d~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~ 434 (479)
|...+++..+++++|+.++++||++|||++.++ .+++++++++|+|++++++|++.+||+||+|||++|+|.+++..+
T Consensus 1 m~~~el~~~le~~~p~~~a~d~d~~GLqv~~~~--~~v~kV~~avd~t~~vi~~Ai~~~ad~ii~HHplif~~~~~~~~~ 78 (250)
T COG0327 1 MKVSELIELLEEFLPPELAEDWDNNGLQVGGPL--EEVKKVAVALDATLAVLDEAIELGADLLIVHHPLIFWPVKSLAID 78 (250)
T ss_pred CCHHHHHHHHHhhcCHHHhhccCcceEEeCCCC--cccceEEEEeeCCHHHHHHHHHCCCCEEEEcCchhcCCCcccccc
Confidence 457899999999999999999999999997653 799999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHhcCceEEeccccccccCCCccccCCCcCCCC
Q psy14815 435 KWKERVVSTCLAHNIAVYSPHTTWDAIQEGRTKKAPPEVQVP 476 (479)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~h~~~d~~~~g~~~~~~~~~~~~ 476 (479)
+++++++++|+++||+||++|||||+|++|.|++++..+++.
T Consensus 79 ~~~~~~i~~li~~~I~ly~~HtnlD~~~~g~N~a~~~~l~~~ 120 (250)
T COG0327 79 GPKGKRIKALIQNDINLYAAHTNLDAHPEGGNDALAAALLGA 120 (250)
T ss_pred chHHHHHHHHHhCCCeEEEcccccccccccccHHHHHHhcCc
Confidence 999999999999999999999999999999899887777643
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-28 Score=232.26 Aligned_cols=257 Identities=27% Similarity=0.459 Sum_probs=219.6
Q ss_pred cccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
|...+.+..|. ..++++++.|++|++||..++..+.. ...+|
T Consensus 207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~i~~------------------------------------~l~GH 248 (537)
T KOG0274|consen 207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYLILT------------------------------------RLVGH 248 (537)
T ss_pred Ccchhhhheee--cCeEEecCCCceeEEeecccceEEEe------------------------------------eccCC
Confidence 67788899988 66899999999999999876655433 13689
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCce
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 169 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 169 (479)
.+.|+++++..-+.++++|+.|.++++||..+|+ +...+.+|.+.|.++... +..+++|+.|.+|++|++.++
T Consensus 249 ~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~--C~~~l~gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~n~--- 321 (537)
T KOG0274|consen 249 FGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGE--CTHSLQGHTSSVRCLTID--PFLLVSGSRDNTVKVWDVTNG--- 321 (537)
T ss_pred CCCceeEEEecCCCEEEEEecCCcEEeEecCCCc--EEEEecCCCceEEEEEcc--CceEeeccCCceEEEEeccCc---
Confidence 9999999998878999999999999999999997 889999999999999875 457888999999999999987
Q ss_pred eeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeE
Q psy14815 170 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 249 (479)
Q Consensus 170 ~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i 249 (479)
.++..+.+|..+|+++.++ +.++++|+.|++|++||..+++ ++.++.+|...|+++.+.+. ..+++|+.|++|
T Consensus 322 ~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~----cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~I 394 (537)
T KOG0274|consen 322 ACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGK----CLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTI 394 (537)
T ss_pred ceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhce----eeeeecCCcceEEEEEecCc-ceEEeeeeccce
Confidence 7777888899999999998 8899999999999999999544 69999999999999998865 899999999999
Q ss_pred EEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEec
Q psy14815 250 KIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHT 329 (479)
Q Consensus 250 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~ 329 (479)
++||++... +|+.++.+| ..-+..+.+ .+++|++++.|++|++||...++ ++..
T Consensus 395 kvWdl~~~~--------------~c~~tl~~h-~~~v~~l~~--~~~~Lvs~~aD~~Ik~WD~~~~~---------~~~~ 448 (537)
T KOG0274|consen 395 KVWDLRTKR--------------KCIHTLQGH-TSLVSSLLL--RDNFLVSSSADGTIKLWDAEEGE---------CLRT 448 (537)
T ss_pred EeecCCchh--------------hhhhhhcCC-ccccccccc--ccceeEeccccccEEEeecccCc---------eeee
Confidence 999984431 567888887 666665554 67799999999999999999988 4555
Q ss_pred cccccccceeEEEec
Q psy14815 330 EHRAHNQDVNCVAWN 344 (479)
Q Consensus 330 ~~~~h~~~v~~~~~s 344 (479)
....|.+.|..+++.
T Consensus 449 ~~~~~~~~v~~l~~~ 463 (537)
T KOG0274|consen 449 LEGRHVGGVSALALG 463 (537)
T ss_pred eccCCcccEEEeecC
Confidence 433367888888887
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.5e-28 Score=222.34 Aligned_cols=237 Identities=23% Similarity=0.369 Sum_probs=197.7
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC-CCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG-HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 168 (479)
...|+++.|+++|.+|++|..+|.|.|||..+.+ .+..+.. |...|-+++|+ +..+.+|+.++.|..+|++..+.
T Consensus 217 ~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k--~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~ 292 (484)
T KOG0305|consen 217 EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQK--KTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQH 292 (484)
T ss_pred CCceEEEEECCCCCEEEEeecCCeEEEEehhhcc--ccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchh
Confidence 7899999999999999999999999999998775 5667777 99999999998 67899999999999999998753
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC-CCEEEEee--C
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLATCS--D 245 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~--~ 245 (479)
. ...+.+|...|..++|+++++++++|+.|+.+.|||..... +...+..|...|..++|+|- ...||+|+ .
T Consensus 293 ~--~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~----p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~ 366 (484)
T KOG0305|consen 293 V--VSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPE----PKFTFTEHTAAVKALAWCPWQSGLLATGGGSA 366 (484)
T ss_pred h--hhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCcc----ccEEEeccceeeeEeeeCCCccCceEEcCCCc
Confidence 2 22488999999999999999999999999999999996444 47788899999999999995 45777765 7
Q ss_pred CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe--CCCeEEEcccCCCCCCCCcee
Q psy14815 246 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC--GDDAIRIFKENPEAGDSDMVS 323 (479)
Q Consensus 246 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~--~dg~i~vw~~~~~~~~~~~~~ 323 (479)
|+.|++||...+. .+..+.. +..|.+|.|++..+-|+++. .++.|.||+..+.+
T Consensus 367 D~~i~fwn~~~g~---------------~i~~vdt--gsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~------- 422 (484)
T KOG0305|consen 367 DRCIKFWNTNTGA---------------RIDSVDT--GSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMK------- 422 (484)
T ss_pred ccEEEEEEcCCCc---------------Eeccccc--CCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccc-------
Confidence 9999999986543 3344433 67899999999987666654 36789999999977
Q ss_pred eEEEeccccccccceeEEEecCCCCCCCcccccHHHHHHHHH
Q psy14815 324 FDLVHTEHRAHNQDVNCVAWNPVVPEPQKTNLTLHDVVRRLE 365 (479)
Q Consensus 324 ~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~~~~~~~~~l~ 365 (479)
......+|...|..+++||||..++.+. ..|.+++++
T Consensus 423 ---~~~~l~gH~~RVl~la~SPdg~~i~t~a--~DETlrfw~ 459 (484)
T KOG0305|consen 423 ---LVAELLGHTSRVLYLALSPDGETIVTGA--ADETLRFWN 459 (484)
T ss_pred ---eeeeecCCcceeEEEEECCCCCEEEEec--ccCcEEecc
Confidence 5555679999999999999999997765 234444443
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.3e-29 Score=227.19 Aligned_cols=255 Identities=19% Similarity=0.349 Sum_probs=211.9
Q ss_pred cccceE---EEEEC-CCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 10 HQGRVW---NVSWN-PQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 10 h~~~V~---~l~~s-~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
|...|. .+..+ |.+++|+|||.||.|++|++...... ........
T Consensus 20 n~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~-------------------------------~s~~~~as 68 (735)
T KOG0308|consen 20 NRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNE-------------------------------PSTPYIAS 68 (735)
T ss_pred ccccccchhhccccCCCCceEEecCCCceEEEeccccccCC-------------------------------cccchhhh
Confidence 445555 44444 36678999999999999987532210 00111222
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEE-cCCCCEEEEEeCCCcEEEEEeC
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTW-SKNGQFLATCSRDKSVWVWEVG 164 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~-~~~~~~l~~~~~dg~i~vwd~~ 164 (479)
++.|.+.|..+....+++.|++++.|-+|++|+...+...+..++..|.+.|.|++. -++...+++|+.|+.|.+||++
T Consensus 69 me~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin 148 (735)
T KOG0308|consen 69 MEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDIN 148 (735)
T ss_pred hhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEcc
Confidence 468999999999999999999999999999999987754577888999999999999 7788899999999999999999
Q ss_pred CCCc-------eeeeeeee-ccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC
Q psy14815 165 EEDE-------YECAAVIN-AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 236 (479)
Q Consensus 165 ~~~~-------~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 236 (479)
.+.. ......+. ++..+|.+++.++.|..+++|+..+.+++||.++.+. +..+++|...|..+..+.|
T Consensus 149 ~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~k----imkLrGHTdNVr~ll~~dD 224 (735)
T KOG0308|consen 149 TGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKK----IMKLRGHTDNVRVLLVNDD 224 (735)
T ss_pred CcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccc----eeeeeccccceEEEEEcCC
Confidence 7622 11222333 7888999999999999999999999999999998775 7788899999999999999
Q ss_pred CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCC
Q psy14815 237 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 237 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
|..++++|.||+|++||+.. .+|+.++..| ...|+++..+|+-+.+.+|+.||.|..=|+.+.
T Consensus 225 Gt~~ls~sSDgtIrlWdLgq---------------QrCl~T~~vH-~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~ 287 (735)
T KOG0308|consen 225 GTRLLSASSDGTIRLWDLGQ---------------QRCLATYIVH-KEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNP 287 (735)
T ss_pred CCeEeecCCCceEEeeeccc---------------cceeeeEEec-cCceEEEeeCCCcceEEecCCCCcEEecccCCc
Confidence 99999999999999999943 3788999998 667999999999999999999999999998874
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-26 Score=185.43 Aligned_cols=293 Identities=18% Similarity=0.275 Sum_probs=216.6
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+.+|. -+..|.+++|.|.|.+.+.|++..++||.....-..+..- +.. ...+.....
T Consensus 26 i~~l~-dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~--hea--------------------~~~pp~v~~ 82 (350)
T KOG0641|consen 26 INILE-DSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHA--HEA--------------------AKQPPSVLC 82 (350)
T ss_pred EEEec-chhheeeEEecCCCceEEeccCCceEEEEccccccCcccc--ccc--------------------ccCCCeEEe
Confidence 34443 4678999999999999999999999999854321111110 000 011111222
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEE---EeEEEeCCCCcEEEEEEcCC----CCEEEEEeC-C
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE---CNATLEGHENEVKSVTWSKN----GQFLATCSR-D 155 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~---~~~~~~~~~~~v~~l~~~~~----~~~l~~~~~-d 155 (479)
.....|.+.|.|.+|+|+|+++++|+.|.+|++.-++..... .-..+..|.+.|..++|..+ +..|++++. |
T Consensus 83 kr~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagd 162 (350)
T KOG0641|consen 83 KRNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGD 162 (350)
T ss_pred eeccccCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCc
Confidence 223678999999999999999999999999999876543211 23567789999999999753 446666654 5
Q ss_pred CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC-------CCccE
Q psy14815 156 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS-------HTSTV 228 (479)
Q Consensus 156 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-------~~~~v 228 (479)
..|.+-|...+ +.+..+.+|.+-|.++ ++=++-.+++|+.|.+|++||++-... +..+.. ..+.|
T Consensus 163 c~iy~tdc~~g---~~~~a~sghtghilal-yswn~~m~~sgsqdktirfwdlrv~~~----v~~l~~~~~~~glessav 234 (350)
T KOG0641|consen 163 CKIYITDCGRG---QGFHALSGHTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSC----VNTLDNDFHDGGLESSAV 234 (350)
T ss_pred ceEEEeecCCC---CcceeecCCcccEEEE-EEecCcEEEccCCCceEEEEeeeccce----eeeccCcccCCCccccee
Confidence 66777777776 5567788888888766 233588999999999999999995543 433321 23679
Q ss_pred EEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEE
Q psy14815 229 WSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIR 308 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~ 308 (479)
.+++..|.|+.|++|-.|....+||++.+ +.++.+..| ...|.++.|+|.-.|+++++.|..|+
T Consensus 235 aav~vdpsgrll~sg~~dssc~lydirg~---------------r~iq~f~ph-sadir~vrfsp~a~yllt~syd~~ik 298 (350)
T KOG0641|consen 235 AAVAVDPSGRLLASGHADSSCMLYDIRGG---------------RMIQRFHPH-SADIRCVRFSPGAHYLLTCSYDMKIK 298 (350)
T ss_pred EEEEECCCcceeeeccCCCceEEEEeeCC---------------ceeeeeCCC-ccceeEEEeCCCceEEEEecccceEE
Confidence 99999999999999999999999999544 557777776 88999999999999999999999999
Q ss_pred EcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCC
Q psy14815 309 IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPE 349 (479)
Q Consensus 309 vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 349 (479)
+-|++..-.. ++...+...|...+..+.|+|..-.
T Consensus 299 ltdlqgdla~------el~~~vv~ehkdk~i~~rwh~~d~s 333 (350)
T KOG0641|consen 299 LTDLQGDLAH------ELPIMVVAEHKDKAIQCRWHPQDFS 333 (350)
T ss_pred Eeecccchhh------cCceEEEEeccCceEEEEecCccce
Confidence 9999765310 1222333578888999999998643
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=226.10 Aligned_cols=331 Identities=15% Similarity=0.186 Sum_probs=255.5
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC----------C-ccceEEEeecCCcEEEec
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL----------P-VETSLRQLVEDKNIRLWG 71 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~i~~w~ 71 (479)
.+.+++++...|+++.=+|-=..+|.|..+|+|.|+|+..++.+.++... . ..+.++++...|.+.+||
T Consensus 194 ~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wD 273 (910)
T KOG1539|consen 194 VVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWD 273 (910)
T ss_pred EEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEE
Confidence 46789999999999999998889999999999999999999988877653 2 334555666678999999
Q ss_pred CCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECC--CCeEEEeEEEeCCCCcEEEEEEc-CCCCE
Q psy14815 72 KESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR--SGQFECNATLEGHENEVKSVTWS-KNGQF 148 (479)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~v~~l~~~-~~~~~ 148 (479)
++... ........|.+.|....|.|....+++++.|+.+++|=.. .|.+..++.-.+|..+..|+.|. .+|..
T Consensus 274 Le~kk----l~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ 349 (910)
T KOG1539|consen 274 LEKKK----LINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHF 349 (910)
T ss_pred cCCCe----eeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheeeeccCcEE
Confidence 99422 2222335788999999999999999999999998888544 44445666778999999999998 58889
Q ss_pred EEEEeCCCcEEEEEeCCCCc-------------------------eeee-------------------------------
Q psy14815 149 LATCSRDKSVWVWEVGEEDE-------------------------YECA------------------------------- 172 (479)
Q Consensus 149 l~~~~~dg~i~vwd~~~~~~-------------------------~~~~------------------------------- 172 (479)
+.+++.|++.+.+++..... .+.+
T Consensus 350 ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~ 429 (910)
T KOG1539|consen 350 ILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNF 429 (910)
T ss_pred EEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEec
Confidence 99999998887776531100 0000
Q ss_pred ------------eeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeee---cCCCccEEEEEEccCC
Q psy14815 173 ------------AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL---KSHTSTVWSLAFDRIG 237 (479)
Q Consensus 173 ------------~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~ 237 (479)
..++.-...+++++.++.|++.+.|...|.|.+|+++++-. ..++ ..|.++|+.++...-+
T Consensus 430 ~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~----r~sf~~~~ah~~~V~gla~D~~n 505 (910)
T KOG1539|consen 430 RNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIH----RKSFGDSPAHKGEVTGLAVDGTN 505 (910)
T ss_pred cCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCee----ecccccCccccCceeEEEecCCC
Confidence 00011124578899999999999999999999999998763 3344 5899999999999999
Q ss_pred CEEEEeeCCCeEEEEeccCCCCCCCCCCCCC--------------------------CCceEEEEEEeccccccEEEEEe
Q psy14815 238 SRLATCSDDATVKIWKEYKPGNSAGIPTPDN--------------------------DSVWKCVCTLSGHHGRTIYDISW 291 (479)
Q Consensus 238 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~i~~l~~ 291 (479)
+.+++++.+|.+++||............... ..+.+.++.+.+| +..|++++|
T Consensus 506 ~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh-~nritd~~F 584 (910)
T KOG1539|consen 506 RLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGH-GNRITDMTF 584 (910)
T ss_pred ceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhcc-ccceeeeEe
Confidence 9999999999999999876542221111000 1122345566776 889999999
Q ss_pred cCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 292 CHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 292 ~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
||||++|++++.|++|++||+.++. ++-.+ .-..+++++.|||+|.+||..
T Consensus 585 S~DgrWlisasmD~tIr~wDlpt~~---------lID~~--~vd~~~~sls~SPngD~LAT~ 635 (910)
T KOG1539|consen 585 SPDGRWLISASMDSTIRTWDLPTGT---------LIDGL--LVDSPCTSLSFSPNGDFLATV 635 (910)
T ss_pred CCCCcEEEEeecCCcEEEEeccCcc---------eeeeE--ecCCcceeeEECCCCCEEEEE
Confidence 9999999999999999999999997 33333 345789999999999999765
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-26 Score=186.16 Aligned_cols=255 Identities=22% Similarity=0.349 Sum_probs=199.8
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEE
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAI 84 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~ 84 (479)
+.-+.|.+.|+|.+|+|+|++|+||++|.+|++.-.....+- ......
T Consensus 83 kr~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~--------------------------------~~g~dl 130 (350)
T KOG0641|consen 83 KRNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCN--------------------------------ATGHDL 130 (350)
T ss_pred eeccccCccEEEEEecCccCeEEecCCCceEEEEeccccccc--------------------------------ccCcce
Confidence 445689999999999999999999999999998765322211 111122
Q ss_pred eccccCCcEEEEEECCC----CCEEEEEEC-CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy14815 85 LSDGHQRTIRETAWSPC----GNFIASASF-DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 159 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~----~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~ 159 (479)
.+.-|.+.|..++|..+ +..|++++. |..|.+-|-.+|+ ....+.+|.+-|.++ ++-++-++++|+.|.+|+
T Consensus 131 e~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~--~~~a~sghtghilal-yswn~~m~~sgsqdktir 207 (350)
T KOG0641|consen 131 EFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQ--GFHALSGHTGHILAL-YSWNGAMFASGSQDKTIR 207 (350)
T ss_pred eeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCC--cceeecCCcccEEEE-EEecCcEEEccCCCceEE
Confidence 23568899999999653 467777654 5677777877776 678899999999887 344688999999999999
Q ss_pred EEEeCCCCceeeeeeee--c-----cccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEE
Q psy14815 160 VWEVGEEDEYECAAVIN--A-----HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLA 232 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~--~-----~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 232 (479)
+||++-. .++..+. . ..+.|.+++..|.|++|++|-.|....+||++.+. ++..+..|...|.++.
T Consensus 208 fwdlrv~---~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r----~iq~f~phsadir~vr 280 (350)
T KOG0641|consen 208 FWDLRVN---SCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGR----MIQRFHPHSADIRCVR 280 (350)
T ss_pred EEeeecc---ceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCc----eeeeeCCCccceeEEE
Confidence 9999977 3333332 1 23568999999999999999999999999999766 4888999999999999
Q ss_pred EccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 233 FDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 233 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
|+|...++++|+.|..|++-|+...-. .+ -++.....| ...+..+.|+|..--+++.+.|.++.+|-+
T Consensus 281 fsp~a~yllt~syd~~ikltdlqgdla-~e----------l~~~vv~eh-kdk~i~~rwh~~d~sfisssadkt~tlwa~ 348 (350)
T KOG0641|consen 281 FSPGAHYLLTCSYDMKIKLTDLQGDLA-HE----------LPIMVVAEH-KDKAIQCRWHPQDFSFISSSADKTATLWAL 348 (350)
T ss_pred eCCCceEEEEecccceEEEeecccchh-hc----------CceEEEEec-cCceEEEEecCccceeeeccCcceEEEecc
Confidence 999999999999999999999843211 11 112334444 677888999999888999999999999976
Q ss_pred C
Q psy14815 313 N 313 (479)
Q Consensus 313 ~ 313 (479)
.
T Consensus 349 ~ 349 (350)
T KOG0641|consen 349 N 349 (350)
T ss_pred C
Confidence 4
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-28 Score=210.83 Aligned_cols=244 Identities=22% Similarity=0.309 Sum_probs=200.5
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
...+|.|-.++|+++.|.++++++++++.|+.+++|++...+...++
T Consensus 211 ~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TL--------------------------------- 257 (459)
T KOG0288|consen 211 LISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTL--------------------------------- 257 (459)
T ss_pred hhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhh---------------------------------
Confidence 45688888999999999999999999999999999999888877665
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd 162 (479)
.+|.+.|+++.|......+++|+.|.+|++||+.... +..++- ..+.+..|..+ ...+++|-.|++|++||
T Consensus 258 ----sGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~--C~kt~l-~~S~cnDI~~~--~~~~~SgH~DkkvRfwD 328 (459)
T KOG0288|consen 258 ----SGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAY--CSKTVL-PGSQCNDIVCS--ISDVISGHFDKKVRFWD 328 (459)
T ss_pred ----cccccceeeehhhccccceeeccccchhhhhhhhhhh--eecccc-ccccccceEec--ceeeeecccccceEEEe
Confidence 5799999999999877779999999999999998864 444332 22445566655 56789999999999999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC----CCccEEEEEEccCCC
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS----HTSTVWSLAFDRIGS 238 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~ 238 (479)
+++. .+......+ +.|+++..++++..+.+++.|.++.+.|+++... ...+.+ -....+.+.|||++.
T Consensus 329 ~Rs~---~~~~sv~~g-g~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI----~~~~sA~g~k~asDwtrvvfSpd~~ 400 (459)
T KOG0288|consen 329 IRSA---DKTRSVPLG-GRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEI----RQTFSAEGFKCASDWTRVVFSPDGS 400 (459)
T ss_pred ccCC---ceeeEeecC-cceeeEeeccCCeEEeeecCCCceeeeecccccE----EEEeeccccccccccceeEECCCCc
Confidence 9987 444455544 4899999999999999999999999999997664 222221 233488999999999
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccc-cEEEEEecCCCCeEEEEeCCCeEEEcc
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR-TIYDISWCHLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~l~~~~~~~~l~~~~~dg~i~vw~ 311 (479)
|+++||.||.|+||++..+ ++...+...+.. .|++++|+|.|..|++++.++.+.+|.
T Consensus 401 YvaAGS~dgsv~iW~v~tg---------------KlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 401 YVAAGSADGSVYIWSVFTG---------------KLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred eeeeccCCCcEEEEEccCc---------------eEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 9999999999999998443 556666655333 699999999999999999999999993
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-28 Score=206.37 Aligned_cols=243 Identities=19% Similarity=0.326 Sum_probs=209.0
Q ss_pred ccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 7 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
|--|.++|.|+.||.|..+||+|+.||.|++|.+.+|+++..|.
T Consensus 259 fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFd------------------------------------ 302 (508)
T KOG0275|consen 259 FMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFD------------------------------------ 302 (508)
T ss_pred eeecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhh------------------------------------
Confidence 34478999999999999999999999999999999999998873
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCC
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 166 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~ 166 (479)
..|...|+|+.|+.|+..+++++.|.++++.-+.+|+ ++..+.+|.+.|+...|.+||..+++++.||+|++|+..+.
T Consensus 303 rAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK--~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~Ktt 380 (508)
T KOG0275|consen 303 RAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGK--CLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTT 380 (508)
T ss_pred hhhccCeeEEEEccCcchhhcccccceEEEeccccch--hHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCcch
Confidence 5799999999999999999999999999999999997 78899999999999999999999999999999999999987
Q ss_pred Cceeeeeeeec--cccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeecC---CCccEEEEEEccCCCEE
Q psy14815 167 DEYECAAVINA--HIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKS---HTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 167 ~~~~~~~~~~~--~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l 240 (479)
+++.+++. ...+|+++-.-| +...++++....+|.+.++...- ++++.. ..+...+.+.+|.|.++
T Consensus 381 ---eC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQv-----VrsfsSGkREgGdFi~~~lSpkGewi 452 (508)
T KOG0275|consen 381 ---ECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQV-----VRSFSSGKREGGDFINAILSPKGEWI 452 (508)
T ss_pred ---hhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceE-----EeeeccCCccCCceEEEEecCCCcEE
Confidence 55555543 445788888777 45788889999999999987432 344332 34556677899999999
Q ss_pred EEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcc
Q psy14815 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 241 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~ 311 (479)
++.+.|+.++.|....+ +..+++..| ...+..++-+|..++|++-++||.+++|.
T Consensus 453 YcigED~vlYCF~~~sG---------------~LE~tl~Vh-EkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 453 YCIGEDGVLYCFSVLSG---------------KLERTLPVH-EKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred EEEccCcEEEEEEeecC---------------ceeeeeecc-cccccccccCcccchhhhhcccchhhhcC
Confidence 99999999999998443 556677776 67788999999999999999999999995
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-27 Score=203.51 Aligned_cols=259 Identities=20% Similarity=0.363 Sum_probs=209.6
Q ss_pred cceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCC---CCEEEEEECCCeEEEEECCCCeEE--EeEE
Q psy14815 55 ETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC---GNFIASASFDATTAVWDKRSGQFE--CNAT 129 (479)
Q Consensus 55 ~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~---~~~l~t~~~dg~i~iwd~~~~~~~--~~~~ 129 (479)
+..+++++.||.+++|+.. + .......+|.++|.+++|.-. ...|++++.|.++++|..+.+... ....
T Consensus 115 ~~~IltgsYDg~~riWd~~--G----k~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~ 188 (423)
T KOG0313|consen 115 SKWILTGSYDGTSRIWDLK--G----KSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKV 188 (423)
T ss_pred CceEEEeecCCeeEEEecC--C----ceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhH
Confidence 5678899999999999998 2 233345799999999888543 346999999999999988776422 2334
Q ss_pred EeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCC----------------------CceeeeeeeeccccceeEEEE
Q psy14815 130 LEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE----------------------DEYECAAVINAHIQDVKKVRF 187 (479)
Q Consensus 130 ~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~----------------------~~~~~~~~~~~~~~~v~~l~~ 187 (479)
..+|...|.+++..++|..+++|+.|.++.+|+.... ....++..+.+|..+|.++.|
T Consensus 189 ~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w 268 (423)
T KOG0313|consen 189 CRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVW 268 (423)
T ss_pred hcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEE
Confidence 4599999999999999999999999999999993211 012345567899999999999
Q ss_pred ecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCC
Q psy14815 188 HPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD 267 (479)
Q Consensus 188 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 267 (479)
++ ...+.+++.|.+|+.||+.++.. ...+. .....+++.++|..++|++|+.|..+++||.+.+...
T Consensus 269 ~d-~~v~yS~SwDHTIk~WDletg~~----~~~~~-~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs------- 335 (423)
T KOG0313|consen 269 SD-ATVIYSVSWDHTIKVWDLETGGL----KSTLT-TNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGS------- 335 (423)
T ss_pred cC-CCceEeecccceEEEEEeecccc----eeeee-cCcceeEeecccccceeeecCCCCceeecCCCCCCCc-------
Confidence 98 67899999999999999998774 33333 4567899999999999999999999999998876432
Q ss_pred CCCceEEEEEEeccccccEEEEEecCCCC-eEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCC
Q psy14815 268 NDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV 346 (479)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 346 (479)
....++.+| ...|.++.|+|... .|++++.|+++++||+++.+. .+..+ .+|...|.++.|+..
T Consensus 336 -----~v~~s~~gH-~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~--------plydI-~~h~DKvl~vdW~~~ 400 (423)
T KOG0313|consen 336 -----VVSQSLIGH-KNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKA--------PLYDI-AGHNDKVLSVDWNEG 400 (423)
T ss_pred -----eeEEeeecc-hhhhhheecCCCCceEEEEEecCCeEEEEEeccCCC--------cceee-ccCCceEEEEeccCC
Confidence 456788898 77999999999765 688999999999999998762 23333 589999999999865
Q ss_pred C
Q psy14815 347 V 347 (479)
Q Consensus 347 ~ 347 (479)
+
T Consensus 401 ~ 401 (423)
T KOG0313|consen 401 G 401 (423)
T ss_pred c
Confidence 4
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-27 Score=195.17 Aligned_cols=234 Identities=18% Similarity=0.302 Sum_probs=195.9
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEEeC
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVG 164 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vwd~~ 164 (479)
..+|...+.+++|+.+|..|++|+.|+++.+|+++..+........+|.+.|-.++|+| +...|++++.|.+|++||++
T Consensus 16 ~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r 95 (313)
T KOG1407|consen 16 LQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIR 95 (313)
T ss_pred hhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEec
Confidence 46889999999999999999999999999999998886555667789999999999998 67799999999999999999
Q ss_pred CCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee
Q psy14815 165 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244 (479)
Q Consensus 165 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 244 (479)
..+ +.......... .-+.|+|+|.+++.++.|..|.+.|.++.+. . .-......+..++|+.++.+++...
T Consensus 96 ~~k---~~~~i~~~~en-i~i~wsp~g~~~~~~~kdD~it~id~r~~~~----~-~~~~~~~e~ne~~w~~~nd~Fflt~ 166 (313)
T KOG1407|consen 96 SGK---CTARIETKGEN-INITWSPDGEYIAVGNKDDRITFIDARTYKI----V-NEEQFKFEVNEISWNNSNDLFFLTN 166 (313)
T ss_pred cCc---EEEEeeccCcc-eEEEEcCCCCEEEEecCcccEEEEEecccce----e-ehhcccceeeeeeecCCCCEEEEec
Confidence 984 44444433333 3588999999999999999999999996553 2 2223455678889998888887777
Q ss_pred CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceee
Q psy14815 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSF 324 (479)
Q Consensus 245 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~ 324 (479)
..|+|.|-.. ...+++.+++.| .....++.|+|+|+++|+|+.|-.+.+||++..-
T Consensus 167 GlG~v~ILsy---------------psLkpv~si~AH-~snCicI~f~p~GryfA~GsADAlvSLWD~~ELi-------- 222 (313)
T KOG1407|consen 167 GLGCVEILSY---------------PSLKPVQSIKAH-PSNCICIEFDPDGRYFATGSADALVSLWDVDELI-------- 222 (313)
T ss_pred CCceEEEEec---------------cccccccccccC-CcceEEEEECCCCceEeeccccceeeccChhHhh--------
Confidence 7899999987 344678888887 6788899999999999999999999999998765
Q ss_pred EEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 325 DLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 325 ~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
|+ +....+.-||..++||.||++||+++
T Consensus 223 -C~-R~isRldwpVRTlSFS~dg~~lASaS 250 (313)
T KOG1407|consen 223 -CE-RCISRLDWPVRTLSFSHDGRMLASAS 250 (313)
T ss_pred -hh-eeeccccCceEEEEeccCcceeeccC
Confidence 33 44467889999999999999999886
|
|
| >KOG4131|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=203.86 Aligned_cols=124 Identities=43% Similarity=0.684 Sum_probs=116.8
Q ss_pred CcccccHHHHHHHHHHhCCCccCCCCCcceeeeccCCCcCcccEEEEEecCCHHHHHHHHHcCCCEEEEeCCCCcccccc
Q psy14815 351 QKTNLTLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIAYHPPIFAPLKR 430 (479)
Q Consensus 351 ~~~~~~~~~~~~~l~~~~p~~~a~~wd~~Gl~v~~~~~~~~v~~il~~~d~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~ 430 (479)
+..++.+..+++.++.++|...+++|||+||++..+.+.....+++++.|.|+.+++||++.+++.|++|||++|||+|.
T Consensus 4 a~~~~~L~avv~si~kfa~~~~~~sWDNvGLLve~p~~~~~k~kVlLT~DLTe~V~eEa~ek~~e~IvAYHP~IFr~~kr 83 (272)
T KOG4131|consen 4 ASASMKLDAVLESIQKFASLSAAESWDNVGLLVEKPSGSRKKKKVLLTNDLTESVAEEALEKNAESIVAYHPPIFRPLKR 83 (272)
T ss_pred chhHhHHHHHHHHHhhhccchhhhcccccceEeecCCCccccceeeEeccchHHHHHHHHHhCCceeEeecCccccchhh
Confidence 34567788999999999999999999999999975555678899999999999999999999999999999999999999
Q ss_pred cCcCChhhHHHHHHHhcCceEEeccccccccCCCccccCCCcCC
Q psy14815 431 VTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQEGRTKKAPPEVQ 474 (479)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~d~~~~g~~~~~~~~~~ 474 (479)
|+...|+.|.+.+++++||++||+||++|.+.+|||++|++.++
T Consensus 84 It~~~~~e~~vi~~~~ngiavySPHtA~Daa~~gVNdwls~gIN 127 (272)
T KOG4131|consen 84 ITKSYPQERKVIKAIANGIAVYSPHTAVDAAGGGVNDWLSKGIN 127 (272)
T ss_pred hcccchHHHHHHHHHhcCceeecchhhhcccccchhHHHHHhhh
Confidence 99999999999999999999999999999999999999999887
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-27 Score=207.38 Aligned_cols=298 Identities=16% Similarity=0.222 Sum_probs=229.3
Q ss_pred eeCC-CcEEEEecccccccccccCC-Cc----------cceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEE
Q psy14815 29 CGED-KNIRLWVMVIREPYEKLHGL-PV----------ETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 96 (479)
Q Consensus 29 ~~~d-g~v~iwd~~~~~~~~~~~~~-~~----------~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v 96 (479)
++.| .++.+||+.+|.....+.+. .. ...+.+-.....+.+|.+....... ...--.++|.++
T Consensus 13 sS~d~~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~l~~~yllsaq~~rp~l~vw~i~k~~~~~-----q~~v~Pg~v~al 87 (476)
T KOG0646|consen 13 SSFDPINCIVWDLRTGTSLLQYKGSYLAQAASLTALNNEYLLSAQLKRPLLHVWEILKKDQVV-----QYIVLPGPVHAL 87 (476)
T ss_pred cCCCCcceeEEecCCCceeEEecCcccccchhhhhhchhheeeecccCccccccccCchhhhh-----hhcccccceeee
Confidence 3444 45999999999888777664 11 1223333445678899887422211 112346789999
Q ss_pred EECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCC------Ccee
Q psy14815 97 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE------DEYE 170 (479)
Q Consensus 97 ~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~------~~~~ 170 (479)
+-+|+|.+|+.|+..|.|++|.+.+|. .+..+.+|-..|+|+.|+.||.+|++|+.||.|.+|.+... ....
T Consensus 88 ~s~n~G~~l~ag~i~g~lYlWelssG~--LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~ 165 (476)
T KOG0646|consen 88 ASSNLGYFLLAGTISGNLYLWELSSGI--LLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVK 165 (476)
T ss_pred ecCCCceEEEeecccCcEEEEEecccc--HHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCcc
Confidence 999999999999899999999999997 55667899999999999999999999999999999987431 2346
Q ss_pred eeeeeeccccceeEEEEecC--CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCe
Q psy14815 171 CAAVINAHIQDVKKVRFHPF--DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 248 (479)
Q Consensus 171 ~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~ 248 (479)
+...+..|.-+|+++...+. ..++++++.|.++++||+..+.. +.++ .....+.+++.+|-+..++.|+.+|.
T Consensus 166 p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~L----Llti-~fp~si~av~lDpae~~~yiGt~~G~ 240 (476)
T KOG0646|consen 166 PLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVL----LLTI-TFPSSIKAVALDPAERVVYIGTEEGK 240 (476)
T ss_pred ceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEecccee----eEEE-ecCCcceeEEEcccccEEEecCCcce
Confidence 77889999999999998764 36899999999999999998763 3333 34678999999999999999999999
Q ss_pred EEEEeccCCCCC-CCCCCCCCCCceEEEEEEecccc-ccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEE
Q psy14815 249 VKIWKEYKPGNS-AGIPTPDNDSVWKCVCTLSGHHG-RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 326 (479)
Q Consensus 249 i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~ 326 (479)
|.+.++...... ..+...........+..+.+|.. .+|+|++.+-||.+|++|+.||.++|||+.+.+ +
T Consensus 241 I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q---------~ 311 (476)
T KOG0646|consen 241 IFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQ---------C 311 (476)
T ss_pred EEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHH---------H
Confidence 999988655421 11111111233455677888733 599999999999999999999999999999987 5
Q ss_pred EeccccccccceeEEEecCCCC
Q psy14815 327 VHTEHRAHNQDVNCVAWNPVVP 348 (479)
Q Consensus 327 ~~~~~~~h~~~v~~~~~sp~~~ 348 (479)
++++ ....++|+.+.+.|-.+
T Consensus 312 iRtl-~~~kgpVtnL~i~~~~~ 332 (476)
T KOG0646|consen 312 IRTL-QTSKGPVTNLQINPLER 332 (476)
T ss_pred HHHH-hhhccccceeEeecccc
Confidence 5554 33678999999966543
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.4e-27 Score=216.68 Aligned_cols=332 Identities=20% Similarity=0.395 Sum_probs=257.6
Q ss_pred CcccccccccccceEEEEECCCCC---eEEEeeCCCcEEEEecccccccc---------------------c--------
Q psy14815 1 MINSQTLKGHQGRVWNVSWNPQGT---MISSCGEDKNIRLWVMVIREPYE---------------------K-------- 48 (479)
Q Consensus 1 ~~~~~~l~~h~~~V~~l~~s~~~~---~l~t~~~dg~v~iwd~~~~~~~~---------------------~-------- 48 (479)
|..+..|.||.+.|.+++|...+. +|+++|+|..||||.+.-+.... .
T Consensus 181 f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~e 260 (764)
T KOG1063|consen 181 FARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFE 260 (764)
T ss_pred eeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehh
Confidence 456778999999999999987444 88999999999999875333110 0
Q ss_pred --ccC----------CCccceEEEeecCCcEEEecCCCCCCceeeeEEe--ccccCCcEEEEEECCCCCEEEEEECCCeE
Q psy14815 49 --LHG----------LPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL--SDGHQRTIRETAWSPCGNFIASASFDATT 114 (479)
Q Consensus 49 --~~~----------~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~--~~~~~~~v~~v~~~~~~~~l~t~~~dg~i 114 (479)
+.+ ++....+++++.|.++.+|........+.....+ ..+.........|+|+++.+++-+..|..
T Consensus 261 all~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~ 340 (764)
T KOG1063|consen 261 ALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGF 340 (764)
T ss_pred hhhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcE
Confidence 112 2445678899999999999988655555444333 23445678999999999999999999999
Q ss_pred EEEEC-CCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCC-CCceeeeeeeeccccceeEEEEecCCC
Q psy14815 115 AVWDK-RSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE-EDEYECAAVINAHIQDVKKVRFHPFDN 192 (479)
Q Consensus 115 ~iwd~-~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~v~~l~~~~~~~ 192 (479)
++|.. +...+.......+|.+.|..++|+|.|.+|++.+.|.+-|+|-.-. ...+..+...+-|...++|++|-+...
T Consensus 341 hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~ 420 (764)
T KOG1063|consen 341 HLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDL 420 (764)
T ss_pred EEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCc
Confidence 99983 3344556667789999999999999999999999999999987652 233555666778999999999998777
Q ss_pred EEEEEEcCCcEEEEecCCc-------------------------------------------cc----------------
Q psy14815 193 ILASASYDDTVKLFKEDKA-------------------------------------------EA---------------- 213 (479)
Q Consensus 193 ~l~~~~~dg~i~i~d~~~~-------------------------------------------~~---------------- 213 (479)
.+++|.....+|+|+..+. ..
T Consensus 421 ~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L 500 (764)
T KOG1063|consen 421 QFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCEL 500 (764)
T ss_pred eeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhc
Confidence 8889999999999975310 00
Q ss_pred -------------ceEeeeeecCCCccEEEEEEccCCCEEEEeeCC-----CeEEEEeccCCCCCCCCCCCCCCCceEEE
Q psy14815 214 -------------DWINFATLKSHTSTVWSLAFDRIGSRLATCSDD-----ATVKIWKEYKPGNSAGIPTPDNDSVWKCV 275 (479)
Q Consensus 214 -------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 275 (479)
.|..+.++.+|...|++++.+|+++.+++++.. ..|++|+. ..|..+
T Consensus 501 ~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t---------------~~W~~~ 565 (764)
T KOG1063|consen 501 TEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNT---------------ANWLQV 565 (764)
T ss_pred cCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEec---------------cchhhh
Confidence 011234456899999999999999999998754 47999997 556667
Q ss_pred EEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 276 CTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 276 ~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
..+.+| .-.|+.++||||+++|++.|.|+++.+|+..... .+...| ...+.|+.-|+++.|+|++.+++.++
T Consensus 566 ~~L~~H-sLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~--~~e~~f----a~~k~HtRIIWdcsW~pde~~FaTaS 637 (764)
T KOG1063|consen 566 QELEGH-SLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDI--KDEFRF----ACLKAHTRIIWDCSWSPDEKYFATAS 637 (764)
T ss_pred heeccc-ceEEEEEEECCCCcEEEEeecCceEEeeeeeccc--chhhhh----ccccccceEEEEcccCcccceeEEec
Confidence 788887 8899999999999999999999999999985543 111222 22578999999999999999886664
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-28 Score=196.83 Aligned_cols=246 Identities=27% Similarity=0.390 Sum_probs=203.2
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeE-EEeEEEeCCCCcEEEEEEcC--CCCEEEEEeCCCcEEEEE
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF-ECNATLEGHENEVKSVTWSK--NGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~l~~~~--~~~~l~~~~~dg~i~vwd 162 (479)
...|.+.|..+...-.|.+|+|++.|++|+|+.++.+.. ..+..+.+|.++|..++|.. -|.+|++++.||.|.+|.
T Consensus 7 dt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWk 86 (299)
T KOG1332|consen 7 DTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWK 86 (299)
T ss_pred hhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEe
Confidence 357888999888888899999999999999999987653 67889999999999999976 899999999999999999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecC--CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC---C
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPF--DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI---G 237 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~ 237 (479)
-.++ .+........|...|++++|.|. |-.|++++.||.|.+.+.+... .+........|.-.|++++|.|- |
T Consensus 87 e~~g-~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g-~w~t~ki~~aH~~GvnsVswapa~~~g 164 (299)
T KOG1332|consen 87 EENG-RWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSG-GWTTSKIVFAHEIGVNSVSWAPASAPG 164 (299)
T ss_pred cCCC-chhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCC-CccchhhhhccccccceeeecCcCCCc
Confidence 8877 66677778899999999999994 5789999999999999998762 23344556789999999999985 4
Q ss_pred -----------CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCC----CeEEEEe
Q psy14815 238 -----------SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT----DLIATAC 302 (479)
Q Consensus 238 -----------~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~----~~l~~~~ 302 (479)
+.|++|+.|..|+||+.... .|+.-+++.+| ...|++++|.|.- .+|++++
T Consensus 165 ~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~-------------~w~~e~~l~~H-~dwVRDVAwaP~~gl~~s~iAS~S 230 (299)
T KOG1332|consen 165 SLVDQGPAAKVKRLVSGGCDNLVKIWKFDSD-------------SWKLERTLEGH-KDWVRDVAWAPSVGLPKSTIASCS 230 (299)
T ss_pred cccccCcccccceeeccCCccceeeeecCCc-------------chhhhhhhhhc-chhhhhhhhccccCCCceeeEEec
Confidence 56999999999999997443 44556678887 8899999999964 4799999
Q ss_pred CCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 303 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 303 ~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.||++.||..+...++ . ..+++......+..++||+.|..|+.+.
T Consensus 231 qDg~viIwt~~~e~e~---w----k~tll~~f~~~~w~vSWS~sGn~LaVs~ 275 (299)
T KOG1332|consen 231 QDGTVIIWTKDEEYEP---W----KKTLLEEFPDVVWRVSWSLSGNILAVSG 275 (299)
T ss_pred CCCcEEEEEecCccCc---c----cccccccCCcceEEEEEeccccEEEEec
Confidence 9999999987733211 1 2223334567899999999999997654
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-27 Score=212.43 Aligned_cols=275 Identities=20% Similarity=0.303 Sum_probs=225.1
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCCCcEEEEeccccc---c------------cccccCCCccceEEEeecCCcEEE
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIRE---P------------YEKLHGLPVETSLRQLVEDKNIRL 69 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~---~------------~~~~~~~~~~~~~~~~~~~~~i~~ 69 (479)
++| .|..-|.++..|...++++||+ .|.|+|||+.... + +++....+++..++.++.-.++.+
T Consensus 414 ~tL-~HGEvVcAvtIS~~trhVyTgG-kgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsi 491 (705)
T KOG0639|consen 414 NTL-AHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSI 491 (705)
T ss_pred hhh-ccCcEEEEEEecCCcceeEecC-CCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeee
Confidence 344 5888999999999999999998 4679999986432 1 222333578888999999999999
Q ss_pred ecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEE
Q psy14815 70 WGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 149 (479)
Q Consensus 70 w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l 149 (479)
||+.......... +....-...+++.+||.+..++++.||.|.|||+.+.. .++.|++|.+.+.||..++||..|
T Consensus 492 WDLAapTprikae---ltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~--~VrqfqGhtDGascIdis~dGtkl 566 (705)
T KOG0639|consen 492 WDLAAPTPRIKAE---LTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQT--LVRQFQGHTDGASCIDISKDGTKL 566 (705)
T ss_pred eeccCCCcchhhh---cCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccce--eeecccCCCCCceeEEecCCCcee
Confidence 9998533322211 12334567889999999999999999999999999875 789999999999999999999999
Q ss_pred EEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEE
Q psy14815 150 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW 229 (479)
Q Consensus 150 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~ 229 (479)
.+|+.|.+||.||++++.+... ....+.|.++-++|++.+++.|-+++.+.+....... ...+.-|.+.|.
T Consensus 567 WTGGlDntvRcWDlregrqlqq----hdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~-----kyqlhlheScVL 637 (705)
T KOG0639|consen 567 WTGGLDNTVRCWDLREGRQLQQ----HDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPE-----KYQLHLHESCVL 637 (705)
T ss_pred ecCCCccceeehhhhhhhhhhh----hhhhhhheecccCCCccceeeecccCcEEEEecCCcc-----ceeecccccEEE
Confidence 9999999999999998753221 1234679999999999999999999999999887655 466778999999
Q ss_pred EEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEE
Q psy14815 230 SLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 309 (479)
Q Consensus 230 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~v 309 (479)
++.|.+.|+++++.+.|+.+..|.+..+.. + |+.....+|.++..+.|.+|+++|+.|....|
T Consensus 638 SlKFa~cGkwfvStGkDnlLnawrtPyGas---------------i--FqskE~SsVlsCDIS~ddkyIVTGSGdkkATV 700 (705)
T KOG0639|consen 638 SLKFAYCGKWFVSTGKDNLLNAWRTPYGAS---------------I--FQSKESSSVLSCDISFDDKYIVTGSGDKKATV 700 (705)
T ss_pred EEEecccCceeeecCchhhhhhccCccccc---------------e--eeccccCcceeeeeccCceEEEecCCCcceEE
Confidence 999999999999999999999998744432 2 23334679999999999999999999988888
Q ss_pred ccc
Q psy14815 310 FKE 312 (479)
Q Consensus 310 w~~ 312 (479)
|.+
T Consensus 701 YeV 703 (705)
T KOG0639|consen 701 YEV 703 (705)
T ss_pred EEE
Confidence 864
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=201.15 Aligned_cols=217 Identities=21% Similarity=0.399 Sum_probs=180.7
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCC------------C----eEEEeEEEeCCCCcEEEEEEcCCC
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS------------G----QFECNATLEGHENEVKSVTWSKNG 146 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~------------~----~~~~~~~~~~~~~~v~~l~~~~~~ 146 (479)
......|..++.+.+|+|||.++++|+.|..|+|.|++. + +...++++..|.++|+++.|+|..
T Consensus 105 t~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre 184 (430)
T KOG0640|consen 105 TKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRE 184 (430)
T ss_pred eEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchh
Confidence 344568999999999999999999999999999999861 1 112467788899999999999999
Q ss_pred CEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCc
Q psy14815 147 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTS 226 (479)
Q Consensus 147 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 226 (479)
..|++|+.|++|++||+......+..+.++ ...+|+++.|+|.|.+|+.|..-.++++||+.+.+. +.....-..|.+
T Consensus 185 ~ILiS~srD~tvKlFDfsK~saKrA~K~~q-d~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qc-fvsanPd~qht~ 262 (430)
T KOG0640|consen 185 TILISGSRDNTVKLFDFSKTSAKRAFKVFQ-DTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQC-FVSANPDDQHTG 262 (430)
T ss_pred heEEeccCCCeEEEEecccHHHHHHHHHhh-ccceeeeEeecCCCceEEEecCCCceeEEeccceeE-eeecCccccccc
Confidence 999999999999999998653323333332 356799999999999999999999999999996552 111223356999
Q ss_pred cEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEec-cccccEEEEEecCCCCeEEEEeCCC
Q psy14815 227 TVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-HHGRTIYDISWCHLTDLIATACGDD 305 (479)
Q Consensus 227 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~l~~~~~dg 305 (479)
.|+++.+++.+++.++++.||.|++||- ...+|+.++.. |.+..|.+..|..+++|+++.+.|.
T Consensus 263 ai~~V~Ys~t~~lYvTaSkDG~IklwDG---------------VS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS 327 (430)
T KOG0640|consen 263 AITQVRYSSTGSLYVTASKDGAIKLWDG---------------VSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDS 327 (430)
T ss_pred ceeEEEecCCccEEEEeccCCcEEeecc---------------ccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcc
Confidence 9999999999999999999999999995 33466777654 4467899999999999999999999
Q ss_pred eEEEcccCCCC
Q psy14815 306 AIRIFKENPEA 316 (479)
Q Consensus 306 ~i~vw~~~~~~ 316 (479)
.+++|++.++.
T Consensus 328 ~vkLWEi~t~R 338 (430)
T KOG0640|consen 328 TVKLWEISTGR 338 (430)
T ss_pred eeeeeeecCCc
Confidence 99999999987
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-26 Score=213.77 Aligned_cols=271 Identities=22% Similarity=0.322 Sum_probs=220.7
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEeccccccccc--ccCC------------CccceEEEeecCCcE
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEK--LHGL------------PVETSLRQLVEDKNI 67 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~--~~~~------------~~~~~~~~~~~~~~i 67 (479)
.+.+.+.||+..|..+++.+. ..++++|.||++++|+-..++.+.. +..+ .+...+..++.|..+
T Consensus 5 ~ls~~l~gH~~DVr~v~~~~~-~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i 83 (745)
T KOG0301|consen 5 KLSHELEGHKSDVRAVAVTDG-VCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTI 83 (745)
T ss_pred eeEEEeccCccchheeEecCC-eEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceE
Confidence 456789999999999997754 4899999999999998755444331 1111 122347778899999
Q ss_pred EEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCC
Q psy14815 68 RLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 147 (479)
Q Consensus 68 ~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 147 (479)
.+|......+ ...+.+|...|.|++...++. +++|+.|.++++|-... +...+++|+..|+++..-|++
T Consensus 84 ~v~~~~~~~P-----~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~~~----l~~~l~gH~asVWAv~~l~e~- 152 (745)
T KOG0301|consen 84 IVFKLSQAEP-----LYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRIGE----LVYSLQGHTASVWAVASLPEN- 152 (745)
T ss_pred EEEecCCCCc-----hhhhhccccceeeeecCCcCc-eEecccccceEEecchh----hhcccCCcchheeeeeecCCC-
Confidence 9998874332 233579999999999888886 99999999999998754 345689999999999999987
Q ss_pred EEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCcc
Q psy14815 148 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST 227 (479)
Q Consensus 148 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 227 (479)
.++||+.|.+|++|.-. ...+++.+|...|+.+++-+++ .+++++.||.|++|++.. + .+....+|++-
T Consensus 153 ~~vTgsaDKtIklWk~~-----~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~~g-e----~l~~~~ghtn~ 221 (745)
T KOG0301|consen 153 TYVTGSADKTIKLWKGG-----TLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDLDG-E----VLLEMHGHTNF 221 (745)
T ss_pred cEEeccCcceeeeccCC-----chhhhhccchhheeeeEEecCC-CeEeecCCceEEEEeccC-c----eeeeeeccceE
Confidence 89999999999999863 5678899999999999999764 588999999999999943 3 47888999999
Q ss_pred EEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeE
Q psy14815 228 VWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAI 307 (479)
Q Consensus 228 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i 307 (479)
|+++....++..++++++|++++||+.. .|.+.+.-. ...|+++.+-++|. +++|+.||.|
T Consensus 222 vYsis~~~~~~~Ivs~gEDrtlriW~~~-----------------e~~q~I~lP-ttsiWsa~~L~NgD-Ivvg~SDG~V 282 (745)
T KOG0301|consen 222 VYSISMALSDGLIVSTGEDRTLRIWKKD-----------------ECVQVITLP-TTSIWSAKVLLNGD-IVVGGSDGRV 282 (745)
T ss_pred EEEEEecCCCCeEEEecCCceEEEeecC-----------------ceEEEEecC-ccceEEEEEeeCCC-EEEeccCceE
Confidence 9999988889999999999999999862 445555543 56899999988886 6678889999
Q ss_pred EEcccCC
Q psy14815 308 RIFKENP 314 (479)
Q Consensus 308 ~vw~~~~ 314 (479)
|||....
T Consensus 283 rVfT~~k 289 (745)
T KOG0301|consen 283 RVFTVDK 289 (745)
T ss_pred EEEEecc
Confidence 9998763
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-26 Score=212.96 Aligned_cols=316 Identities=23% Similarity=0.402 Sum_probs=239.0
Q ss_pred cccccccceEEEEECCCCCeEEEeeCCCcEEEEeccccc--c-----cccccC----------CCccceEEEeecCCcEE
Q psy14815 6 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIRE--P-----YEKLHG----------LPVETSLRQLVEDKNIR 68 (479)
Q Consensus 6 ~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~--~-----~~~~~~----------~~~~~~~~~~~~~~~i~ 68 (479)
.+.||++.|+++.|+|.+..|+++|.|.++.+|.-.+.. - +..+.+ .+..+.+++-+..|..+
T Consensus 262 ll~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~h 341 (764)
T KOG1063|consen 262 LLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFH 341 (764)
T ss_pred hhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEE
Confidence 345999999999999999999999999999999754331 1 111111 24566788888899999
Q ss_pred EecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCC--eEEEeEEEeCCCCcEEEEEEcCCC
Q psy14815 69 LWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG--QFECNATLEGHENEVKSVTWSKNG 146 (479)
Q Consensus 69 ~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~v~~l~~~~~~ 146 (479)
+|...+ ...+... ....+|.+.|++++|.|.|.+|++++.|.+-|++-.-.. ++..+...+-|....+|++|-+..
T Consensus 342 lWkt~d-~~~w~~~-~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~ 419 (764)
T KOG1063|consen 342 LWKTKD-KTFWTQE-PVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNED 419 (764)
T ss_pred EEeccC-ccceeec-cccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCC
Confidence 998331 2233333 334899999999999999999999999999999865422 234455556788899999999877
Q ss_pred CEEEEEeCCCcEEEEEeCC-------------------------------------------CCc---------------
Q psy14815 147 QFLATCSRDKSVWVWEVGE-------------------------------------------EDE--------------- 168 (479)
Q Consensus 147 ~~l~~~~~dg~i~vwd~~~-------------------------------------------~~~--------------- 168 (479)
..|++|.....+|+|+... +..
T Consensus 420 ~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~ 499 (764)
T KOG1063|consen 420 LQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCE 499 (764)
T ss_pred ceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchh
Confidence 7899999999999997520 000
Q ss_pred ---------------eeeeeeeeccccceeEEEEecCCCEEEEEEcCC-----cEEEEecCCcccceEeeeeecCCCccE
Q psy14815 169 ---------------YECAAVINAHIQDVKKVRFHPFDNILASASYDD-----TVKLFKEDKAEADWINFATLKSHTSTV 228 (479)
Q Consensus 169 ---------------~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~~v 228 (479)
+..+..+.+|...|.+++.+|+++++++++... .|++|+..+ |.....+.+|+-.|
T Consensus 500 L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~----W~~~~~L~~HsLTV 575 (764)
T KOG1063|consen 500 LTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTAN----WLQVQELEGHSLTV 575 (764)
T ss_pred ccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccc----hhhhheecccceEE
Confidence 001123457888999999999999999998654 499999884 44467899999999
Q ss_pred EEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEE
Q psy14815 229 WSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIR 308 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~ 308 (479)
+.++||||+++|++.+.|.++.+|......... .. ....+.| ..-|+++.|+|++.+++|+|.|.+|+
T Consensus 576 T~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e--------~~---fa~~k~H-tRIIWdcsW~pde~~FaTaSRDK~Vk 643 (764)
T KOG1063|consen 576 TRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDE--------FR---FACLKAH-TRIIWDCSWSPDEKYFATASRDKKVK 643 (764)
T ss_pred EEEEECCCCcEEEEeecCceEEeeeeecccchh--------hh---hcccccc-ceEEEEcccCcccceeEEecCCceEE
Confidence 999999999999999999999999874332211 00 1224454 88999999999999999999999999
Q ss_pred EcccCCCCCCCCceeeEEEec-cccccccceeEEEecCC
Q psy14815 309 IFKENPEAGDSDMVSFDLVHT-EHRAHNQDVNCVAWNPV 346 (479)
Q Consensus 309 vw~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~sp~ 346 (479)
+|........ .+.. ....+...|++++|.|-
T Consensus 644 VW~~~~~~d~-------~i~~~a~~~~~~aVTAv~~~~~ 675 (764)
T KOG1063|consen 644 VWEEPDLRDK-------YISRFACLKFSLAVTAVAYLPV 675 (764)
T ss_pred EEeccCchhh-------hhhhhchhccCCceeeEEeecc
Confidence 9998776211 1111 23467789999998875
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=222.47 Aligned_cols=225 Identities=20% Similarity=0.368 Sum_probs=186.1
Q ss_pred cEEEEEECC-CCCEEEEEECCCeEEEEECCCC-eEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEEeCCCCc
Q psy14815 92 TIRETAWSP-CGNFIASASFDATTAVWDKRSG-QFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 92 ~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vwd~~~~~~ 168 (479)
.+..++|+. +.++|||++..|.|.+||+... +...+..|..|+..+.++.|++ ...+|++|+.||.|++||++..
T Consensus 89 S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~-- 166 (839)
T KOG0269|consen 89 SAADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSK-- 166 (839)
T ss_pred ehhhcccccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecc--
Confidence 456678875 5689999999999999999761 1135567889999999999998 6789999999999999999987
Q ss_pred eeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCC
Q psy14815 169 YECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 247 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 247 (479)
.....+.+....|+.++|+| .+..++++.+.|.+++||+|.... +..++.+|.++|.++.|+|++.+|||||.|+
T Consensus 167 -~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r---~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK 242 (839)
T KOG0269|consen 167 -KSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDR---CEKKLTAHNGPVLCLNWHPNREWLATGGRDK 242 (839)
T ss_pred -cccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchh---HHHHhhcccCceEEEeecCCCceeeecCCCc
Confidence 44556667788999999999 678999999999999999998763 6778899999999999999999999999999
Q ss_pred eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCe-EEEEeC--CCeEEEcccCCCCCCCCceee
Q psy14815 248 TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDL-IATACG--DDAIRIFKENPEAGDSDMVSF 324 (479)
Q Consensus 248 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~-l~~~~~--dg~i~vw~~~~~~~~~~~~~~ 324 (479)
+|+|||...... +.+.++.. ..+|..+.|-|..++ |++++. |-.|+|||++..-
T Consensus 243 ~vkiWd~t~~~~-------------~~~~tInT--iapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPY-------- 299 (839)
T KOG0269|consen 243 MVKIWDMTDSRA-------------KPKHTINT--IAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPY-------- 299 (839)
T ss_pred cEEEEeccCCCc-------------cceeEEee--cceeeeeeeccCccchhhhhhccccceEEEEeecccc--------
Confidence 999999854322 22344443 679999999998664 565543 7899999998876
Q ss_pred EEEeccccccccceeEEEecCC
Q psy14815 325 DLVHTEHRAHNQDVNCVAWNPV 346 (479)
Q Consensus 325 ~~~~~~~~~h~~~v~~~~~sp~ 346 (479)
+....+..|...++.++|-..
T Consensus 300 -IP~~t~~eH~~~vt~i~W~~~ 320 (839)
T KOG0269|consen 300 -IPYATFLEHTDSVTGIAWDSG 320 (839)
T ss_pred -ccceeeeccCccccceeccCC
Confidence 455556789999999999873
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.4e-26 Score=215.80 Aligned_cols=266 Identities=23% Similarity=0.362 Sum_probs=214.9
Q ss_pred cccccceEEEEECCCCCeEEEeeCCCcEEEEeccccc-ccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 8 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIRE-PYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 8 ~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
.+|+.+-+.++|.|+|++|.|++.||.|++|+..+.. .-..+
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti------------------------------------- 52 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETI------------------------------------- 52 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchh-------------------------------------
Confidence 3799999999999999999999999999999864431 11111
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCC
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 166 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~ 166 (479)
..+...|.+++.. +.+|++|+.+++|.+|.+.+++.. ..+...+-++.+++|+.+|++++.|+.|-.|++-++.+.
T Consensus 53 ~~~g~~v~~ia~~--s~~f~~~s~~~tv~~y~fps~~~~--~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~ 128 (933)
T KOG1274|consen 53 DISGELVSSIACY--SNHFLTGSEQNTVLRYKFPSGEED--TILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDS 128 (933)
T ss_pred hccCceeEEEeec--ccceEEeeccceEEEeeCCCCCcc--ceeeeeeccceEEEEecCCcEEEeecCceeEEEEecccc
Confidence 1256777777764 559999999999999999888632 233344568999999999999999999999999999887
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC--------CCccEEEEEEccCCC
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS--------HTSTVWSLAFDRIGS 238 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~ 238 (479)
.....+.+|..+|.++.|+|++++||+.+.||.|++||+..+.. ..++.+ ....+..++|+|++.
T Consensus 129 ---s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~----~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g 201 (933)
T KOG1274|consen 129 ---SQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGIL----SKTLTGVDKDNEFILSRICTRLAWHPKGG 201 (933)
T ss_pred ---chheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchh----hhhcccCCccccccccceeeeeeecCCCC
Confidence 45667889999999999999999999999999999999997653 222211 145678899999988
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccc-cccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCC
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAG 317 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~ 317 (479)
.++..+.|+.|++|+. ..|.....+...+ ...+..++|+|.|+|||+++.||.|-|||.++-.
T Consensus 202 ~la~~~~d~~Vkvy~r---------------~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~- 265 (933)
T KOG1274|consen 202 TLAVPPVDNTVKVYSR---------------KGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDTHE- 265 (933)
T ss_pred eEEeeccCCeEEEEcc---------------CCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecccch-
Confidence 8988999999999997 4555566665542 3349999999999999999999999999999843
Q ss_pred CCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 318 DSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 318 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
. ......|.+++|.|++..+
T Consensus 266 ---------~----~~~~~~Vc~~aw~p~~n~i 285 (933)
T KOG1274|consen 266 ---------R----HEFKRAVCCEAWKPNANAI 285 (933)
T ss_pred ---------h----ccccceeEEEecCCCCCee
Confidence 1 1234679999999999877
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.4e-27 Score=208.53 Aligned_cols=260 Identities=17% Similarity=0.270 Sum_probs=196.0
Q ss_pred cccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
-...|++++|++.|..|++.+.....+|+|-...+...... |.-.|-|+. ...+|
T Consensus 213 E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~K--------------GDQYI~Dm~-----------nTKGH 267 (641)
T KOG0772|consen 213 ETHQINSLQYSVTGDQILVVSGSAQAKLLDRDGFEIVEFSK--------------GDQYIRDMY-----------NTKGH 267 (641)
T ss_pred cccccceeeecCCCCeEEEEecCcceeEEccCCceeeeeec--------------cchhhhhhh-----------ccCCc
Confidence 34679999999999988888878889999854333322221 111112221 24799
Q ss_pred CCcEEEEEECCC-CCEEEEEECCCeEEEEECCCCeEEEeEEEe-----CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 90 QRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLE-----GHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 90 ~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~-----~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
...++|.+|+|+ ...++|++.||+++|||+..-+ .....++ +..-++++++|+++++.||+|+.||+|.+|+.
T Consensus 268 ia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k-~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~ 346 (641)
T KOG0772|consen 268 IAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTK-SQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDK 346 (641)
T ss_pred eeeeeccccccCcccceEEecCCCcEEEEecCCch-hheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeec
Confidence 999999999995 5789999999999999997654 1222222 23347899999999999999999999999998
Q ss_pred CCCCceeeeeeeecccc--ceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC--CCccEEEEEEccCCCE
Q psy14815 164 GEEDEYECAAVINAHIQ--DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS--HTSTVWSLAFDRIGSR 239 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~--~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~ 239 (479)
...........-..|.. .|+|+.|+++|++|++-+.|+++++||+++.+. ++....+ ...+-+.++|||+.+.
T Consensus 347 ~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kk---pL~~~tgL~t~~~~tdc~FSPd~kl 423 (641)
T KOG0772|consen 347 GSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKK---PLNVRTGLPTPFPGTDCCFSPDDKL 423 (641)
T ss_pred CCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecccccc---chhhhcCCCccCCCCccccCCCceE
Confidence 66543344455567776 899999999999999999999999999998764 3333332 2345578899999999
Q ss_pred EEEee------CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccC
Q psy14815 240 LATCS------DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 313 (479)
Q Consensus 240 l~s~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~ 313 (479)
|++|+ ..|.+.+||. .++..+..+.-. ...|..+.|+|.-+.|+.|+.||.++||--.
T Consensus 424 i~TGtS~~~~~~~g~L~f~d~---------------~t~d~v~ki~i~-~aSvv~~~WhpkLNQi~~gsgdG~~~vyYdp 487 (641)
T KOG0772|consen 424 ILTGTSAPNGMTAGTLFFFDR---------------MTLDTVYKIDIS-TASVVRCLWHPKLNQIFAGSGDGTAHVYYDP 487 (641)
T ss_pred EEecccccCCCCCceEEEEec---------------cceeeEEEecCC-CceEEEEeecchhhheeeecCCCceEEEECc
Confidence 99986 3578999997 334455565554 6789999999998889999999999998433
Q ss_pred C
Q psy14815 314 P 314 (479)
Q Consensus 314 ~ 314 (479)
.
T Consensus 488 ~ 488 (641)
T KOG0772|consen 488 N 488 (641)
T ss_pred c
Confidence 3
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-26 Score=211.76 Aligned_cols=307 Identities=20% Similarity=0.280 Sum_probs=238.3
Q ss_pred EEEEECCCCCeEEEeeCCCcEEEEecccccccccc-------------cCCC-----------ccceEEEeecCCcEEEe
Q psy14815 15 WNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKL-------------HGLP-----------VETSLRQLVEDKNIRLW 70 (479)
Q Consensus 15 ~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~-------------~~~~-----------~~~~~~~~~~~~~i~~w 70 (479)
-++.|++....|.+...|..+.|||+..-....+. ...| ....+.+.++|++|++|
T Consensus 328 IA~~Fdet~~klscVYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW 407 (1080)
T KOG1408|consen 328 IACQFDETTDKLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLW 407 (1080)
T ss_pred eEEEecCCCceEEEEEcCceEEEEeccccccccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEe
Confidence 46789999999999999999999998764432221 1111 13457888999999999
Q ss_pred cCCCCCCceee-eEE-------------------------------eccccCCcEEEEEECCCCCEEEEEECCCeEEEEE
Q psy14815 71 GKESFGNKFTA-KAI-------------------------------LSDGHQRTIRETAWSPCGNFIASASFDATTAVWD 118 (479)
Q Consensus 71 ~~~~~~~~~~~-~~~-------------------------------~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd 118 (479)
+++...+.... +.. ...+....+.+++.+|+|++||+|..-|+++||+
T Consensus 408 ~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~ 487 (1080)
T KOG1408|consen 408 DLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYD 487 (1080)
T ss_pred ecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEE
Confidence 99862211110 000 0112345789999999999999999999999999
Q ss_pred CCCCeEEEeEEEeCCCCcEEEEEEcC---CCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCC--CE
Q psy14815 119 KRSGQFECNATLEGHENEVKSVTWSK---NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD--NI 193 (479)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~v~~l~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--~~ 193 (479)
+.... ....++.|+..|.|+.|+. ..++|++++.|..|++||+... +..++++.+|...|+++.|.-.| ..
T Consensus 488 Lq~l~--~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rn--y~l~qtld~HSssITsvKFa~~gln~~ 563 (1080)
T KOG1408|consen 488 LQELE--YTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRN--YDLVQTLDGHSSSITSVKFACNGLNRK 563 (1080)
T ss_pred ehhhh--hhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccc--cchhhhhcccccceeEEEEeecCCceE
Confidence 98875 5677889999999999986 3468999999999999999764 46678899999999999998877 78
Q ss_pred EEEEEcCCcEEEEecCCcccce-EeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCce
Q psy14815 194 LASASYDDTVKLFKEDKAEADW-INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 272 (479)
Q Consensus 194 l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 272 (479)
+++++.|+.|.+--.++..... .+..+-......++.++..|..+++++++.|..|+|||+..+
T Consensus 564 MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sg--------------- 628 (1080)
T KOG1408|consen 564 MISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESG--------------- 628 (1080)
T ss_pred EEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEecccc---------------
Confidence 9999999887665444322110 011111112456899999999999999999999999999554
Q ss_pred EEEEEEecc--ccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 273 KCVCTLSGH--HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 273 ~~~~~~~~~--~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
+..+.|++. +++....+...|.|-|+++.+.|.++.++|+.+++ |+.+. .+|.+.|+.+.|++|.+.|
T Consensus 629 Kq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgE---------cvA~m-~GHsE~VTG~kF~nDCkHl 698 (1080)
T KOG1408|consen 629 KQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGE---------CVAQM-TGHSEAVTGVKFLNDCKHL 698 (1080)
T ss_pred ceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccch---------hhhhh-cCcchheeeeeecccchhh
Confidence 456666654 34577889999999999999999999999999998 66665 5999999999999999988
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.2e-26 Score=189.06 Aligned_cols=301 Identities=21% Similarity=0.311 Sum_probs=217.9
Q ss_pred cccccceEEEEECC-CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 8 KGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 8 ~~h~~~V~~l~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
+.|.+.|+++...+ .|+++++|+.||.|.+||++.......- ..++ ...........
T Consensus 40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s------~li~----------------k~~c~v~~~h~ 97 (397)
T KOG4283|consen 40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEAS------GLIA----------------KHKCIVAKQHE 97 (397)
T ss_pred ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhc------ccee----------------heeeeccccCC
Confidence 46999999999988 7899999999999999998754321100 0000 00000011123
Q ss_pred cccCCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC---CCCEEEEEeCCCcEEEEE
Q psy14815 87 DGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK---NGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 87 ~~~~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~---~~~~l~~~~~dg~i~vwd 162 (479)
.+|.-.|..+.|-| |...+.+++.|.++++||..+.+ ....|+ .++.|++-+++| ...++++|..+-.|++.|
T Consensus 98 ~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ--~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCD 174 (397)
T KOG4283|consen 98 NGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQ--EAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCD 174 (397)
T ss_pred ccceeeeeeeEEeeecCceeecccccceEEEeecccce--eeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEe
Confidence 67889999999999 66789999999999999999887 334444 356789999998 345788888999999999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCC-EEEEEEcCCcEEEEecCCcccce-----------EeeeeecCCCccEEE
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASASYDDTVKLFKEDKAEADW-----------INFATLKSHTSTVWS 230 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~-----------~~~~~~~~~~~~v~~ 230 (479)
+.++ .+...+.+|...|.++.|+|... .|++|+.||.|++||++....-+ ..+..-..|.+.|..
T Consensus 175 i~SG---s~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvng 251 (397)
T KOG4283|consen 175 IASG---SFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNG 251 (397)
T ss_pred ccCC---cceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeee
Confidence 9998 77889999999999999999665 57889999999999998653211 112234568899999
Q ss_pred EEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEc
Q psy14815 231 LAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 310 (479)
Q Consensus 231 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw 310 (479)
++|+.++.++++++.|..+++|+...+.+...... +....-+.+ -.+. +. +.+...++.--.++.+.++
T Consensus 252 la~tSd~~~l~~~gtd~r~r~wn~~~G~ntl~~~g-------~~~~n~~~~--~~~~-~~-~~~s~vfv~~p~~~~lall 320 (397)
T KOG4283|consen 252 LAWTSDARYLASCGTDDRIRVWNMESGRNTLREFG-------PIIHNQTTS--FAVH-IQ-SMDSDVFVLFPNDGSLALL 320 (397)
T ss_pred eeecccchhhhhccCccceEEeecccCcccccccc-------ccccccccc--ceEE-Ee-ecccceEEEEecCCeEEEE
Confidence 99999999999999999999999877765422111 111111111 1111 22 2333444444456888888
Q ss_pred ccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcccccH
Q psy14815 311 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTNLTL 357 (479)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~~~ 357 (479)
++-.+. ..+.+..|-..|.|.++.|+-+.+..+.+..
T Consensus 321 ~~~sgs----------~ir~l~~h~k~i~c~~~~~~fq~~~tg~~d~ 357 (397)
T KOG4283|consen 321 NLLEGS----------FVRRLSTHLKRINCAAYRPDFEQCFTGDMNG 357 (397)
T ss_pred EccCce----------EEEeeecccceeeEEeecCchhhhhccccCC
Confidence 888887 5555678888999999999987776666544
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=205.23 Aligned_cols=250 Identities=20% Similarity=0.379 Sum_probs=201.0
Q ss_pred ccccCCcEEEEEECCCC-CEEEEEECCCeEEEEECCCC--------eEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCC
Q psy14815 86 SDGHQRTIRETAWSPCG-NFIASASFDATTAVWDKRSG--------QFECNATLEGHENEVKSVTWSK-NGQFLATCSRD 155 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~-~~l~t~~~dg~i~iwd~~~~--------~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~d 155 (479)
...|.+.|+.+.+.|+. ..+++.+..+.|.|||...- ...+-..+.+|...-++++|++ ..-.+++++.|
T Consensus 120 ~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d 199 (422)
T KOG0264|consen 120 KINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDD 199 (422)
T ss_pred eccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCC
Confidence 35789999999999965 56677788899999997642 2223347889998888999998 44479999999
Q ss_pred CcEEEEEeCCCCc----eeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEE
Q psy14815 156 KSVWVWEVGEEDE----YECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWS 230 (479)
Q Consensus 156 g~i~vwd~~~~~~----~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~ 230 (479)
+.|++||+..... ......+.+|...|..++|++ ...++++++.|+.+.|||.|+. ..++.....+|...|.|
T Consensus 200 ~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~--~~~~~~~~~ah~~~vn~ 277 (422)
T KOG0264|consen 200 HTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSN--TSKPSHSVKAHSAEVNC 277 (422)
T ss_pred CcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCC--CCCCcccccccCCceeE
Confidence 9999999986543 455677889999999999999 5678999999999999999973 22456777899999999
Q ss_pred EEEccCC-CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCC-CCeEEEEeCCCeEE
Q psy14815 231 LAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL-TDLIATACGDDAIR 308 (479)
Q Consensus 231 ~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~-~~~l~~~~~dg~i~ 308 (479)
++|+|-+ ..||+||.|++|.+||+|+... ++.++.+| ...|.++.|+|. ...||+++.|+.+.
T Consensus 278 ~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~--------------~lh~~e~H-~dev~~V~WSPh~etvLASSg~D~rl~ 342 (422)
T KOG0264|consen 278 VAFNPFNEFILATGSADKTVALWDLRNLNK--------------PLHTFEGH-EDEVFQVEWSPHNETVLASSGTDRRLN 342 (422)
T ss_pred EEeCCCCCceEEeccCCCcEEEeechhccc--------------CceeccCC-CcceEEEEeCCCCCceeEecccCCcEE
Confidence 9999965 5678999999999999987654 46888887 889999999997 45899999999999
Q ss_pred EcccCCCCCCC----CceeeEEEeccccccccceeEEEecCCCCCCCc
Q psy14815 309 IFKENPEAGDS----DMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 309 vw~~~~~~~~~----~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~ 352 (479)
|||+..-.+.. .......+.....||...|..+.|+|..+++..
T Consensus 343 vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~ 390 (422)
T KOG0264|consen 343 VWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIA 390 (422)
T ss_pred EEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEE
Confidence 99997643221 111122344566899999999999999998743
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=194.63 Aligned_cols=292 Identities=22% Similarity=0.339 Sum_probs=218.3
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccc---cCCCccceEEEeecCCcEEEec--CCCCC
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKL---HGLPVETSLRQLVEDKNIRLWG--KESFG 76 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~w~--~~~~~ 76 (479)
.|+.++.||.+.|+|+.|++.+.+++|++.|++-.||...-.-+...- ..+......-.. |.....-| ....+
T Consensus 181 ~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~s--De~~~d~d~~~~sD~ 258 (481)
T KOG0300|consen 181 ACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHS--DEHNRDTDSSEKSDG 258 (481)
T ss_pred cceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcc--cccccccccccccCC
Confidence 367789999999999999999999999999999999963211111000 000000000000 11111111 01112
Q ss_pred CceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC
Q psy14815 77 NKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 156 (479)
Q Consensus 77 ~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg 156 (479)
.........+.+|...|.+..|-..|+.+++++.|.+..+||++++. .+..+.+|....+.++-+|..+++++.+.|.
T Consensus 259 ~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge--~v~~LtGHd~ELtHcstHptQrLVvTsSrDt 336 (481)
T KOG0300|consen 259 HTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGE--VVNILTGHDSELTHCSTHPTQRLVVTSSRDT 336 (481)
T ss_pred ceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCc--eeccccCcchhccccccCCcceEEEEeccCc
Confidence 22333444467899999999999999999999999999999999996 7788999999999999999999999999999
Q ss_pred cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC
Q psy14815 157 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 236 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 236 (479)
+.++||++. .+..+..+++|...|++..|..+. .+++|+.|.+|++||+++... ++.++. ..++++.++.+..
T Consensus 337 TFRLWDFRe--aI~sV~VFQGHtdtVTS~vF~~dd-~vVSgSDDrTvKvWdLrNMRs---plATIR-tdS~~NRvavs~g 409 (481)
T KOG0300|consen 337 TFRLWDFRE--AIQSVAVFQGHTDTVTSVVFNTDD-RVVSGSDDRTVKVWDLRNMRS---PLATIR-TDSPANRVAVSKG 409 (481)
T ss_pred eeEeccchh--hcceeeeecccccceeEEEEecCC-ceeecCCCceEEEeeeccccC---cceeee-cCCccceeEeecC
Confidence 999999994 457788899999999999999754 589999999999999997664 344544 4577899999988
Q ss_pred CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC--eEEEEeCCCeEEEcccCC
Q psy14815 237 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD--LIATACGDDAIRIFKENP 314 (479)
Q Consensus 237 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~--~l~~~~~dg~i~vw~~~~ 314 (479)
+..++.--++..|++||+...... .++ ...-++| ..-|+|++|..+-. -|++++.|..+.=|++..
T Consensus 410 ~~iIAiPhDNRqvRlfDlnG~Rla-RlP----------rtsRqgH-rRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~ 477 (481)
T KOG0300|consen 410 HPIIAIPHDNRQVRLFDLNGNRLA-RLP----------RTSRQGH-RRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINT 477 (481)
T ss_pred CceEEeccCCceEEEEecCCCccc-cCC----------ccccccc-ceeeeeeeccccCcccccccccccceeeeeEecc
Confidence 888888888889999998543221 111 1223444 88999999986533 588999999999999876
Q ss_pred CC
Q psy14815 315 EA 316 (479)
Q Consensus 315 ~~ 316 (479)
..
T Consensus 478 p~ 479 (481)
T KOG0300|consen 478 PT 479 (481)
T ss_pred cC
Confidence 53
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-26 Score=201.48 Aligned_cols=238 Identities=20% Similarity=0.267 Sum_probs=195.9
Q ss_pred cccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecc
Q psy14815 8 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSD 87 (479)
Q Consensus 8 ~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~ 87 (479)
++|...|.+++.|+||+|||||+.|..|.||+..+.+.++.+ .
T Consensus 199 ~~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~-------------------------------------~ 241 (479)
T KOG0299|consen 199 KGHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVF-------------------------------------K 241 (479)
T ss_pred ccccceeEEEEEcCCCcEEEecCCCceEEEecCcccchhhcc-------------------------------------c
Confidence 489999999999999999999999999999999998887665 6
Q ss_pred ccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCC
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 167 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~ 167 (479)
+|.+.|.+++|-.....+++++.|++|++|+++... .+.++.+|.+.|.+|.-..-++.+-+|+.|+++++|++...
T Consensus 242 ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s--~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~ee- 318 (479)
T KOG0299|consen 242 GHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLS--YVETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPEE- 318 (479)
T ss_pred ccccceeeeeeecCccceeeeecCCceEEEehhHhH--HHHHHhCCccceeeechhcccceEEeccccceeEEEecccc-
Confidence 899999999999888899999999999999998775 66788899999999999988888888889999999999553
Q ss_pred ceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeee-----ee---cCCCccEEEEEEccCCCE
Q psy14815 168 EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFA-----TL---KSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-----~~---~~~~~~v~~~~~~~~~~~ 239 (479)
....+.++.+.+-|++|-. ...+++|+.+|.|.+|++.+.++.+.... .. ..+...|++++..|..++
T Consensus 319 ---sqlifrg~~~sidcv~~In-~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL 394 (479)
T KOG0299|consen 319 ---SQLIFRGGEGSIDCVAFIN-DEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDL 394 (479)
T ss_pred ---ceeeeeCCCCCeeeEEEec-ccceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecccCce
Confidence 3345778888999999985 56799999999999999987664211100 00 112237999999999999
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~ 302 (479)
+++|+.+|.|++|-+..+... ..++..+.- .+-|++++|+++|+.+++|.
T Consensus 395 ~asGS~~G~vrLW~i~~g~r~-----------i~~l~~ls~--~GfVNsl~f~~sgk~ivagi 444 (479)
T KOG0299|consen 395 LASGSWSGCVRLWKIEDGLRA-----------INLLYSLSL--VGFVNSLAFSNSGKRIVAGI 444 (479)
T ss_pred EEecCCCCceEEEEecCCccc-----------cceeeeccc--ccEEEEEEEccCCCEEEEec
Confidence 999999999999998665332 133444442 56799999999999776663
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-26 Score=208.37 Aligned_cols=292 Identities=20% Similarity=0.359 Sum_probs=222.2
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC---------Ccc-ceEEEeecCC-------
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL---------PVE-TSLRQLVEDK------- 65 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~---------~~~-~~~~~~~~~~------- 65 (479)
+...++||++.|.||+..|.|.+|++|+.||+||||.+.+|.++.++... +.. ..+++++.+.
T Consensus 392 ~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp 471 (733)
T KOG0650|consen 392 CALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVGECVLIVNP 471 (733)
T ss_pred eeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEecCceEEeCc
Confidence 34568899999999999999999999999999999999999988765432 221 2222222222
Q ss_pred --------------------------cEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECC---CeEEE
Q psy14815 66 --------------------------NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD---ATTAV 116 (479)
Q Consensus 66 --------------------------~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~d---g~i~i 116 (479)
.+..|.-......... ......|...|..+.|+..|.||++...+ ..|.|
T Consensus 472 ~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~-v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~Vli 550 (733)
T KOG0650|consen 472 IFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKG-VCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLI 550 (733)
T ss_pred cccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccc-eEEEEecCCccceeeeecCCceEEEeccCCCcceEEE
Confidence 2333433321111111 12335688999999999999999998764 47999
Q ss_pred EECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEE
Q psy14815 117 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 196 (479)
Q Consensus 117 wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~ 196 (479)
+++.... ....|....+.|.++.|+|...+|++++. ..|++||+... ..+..+......|..++.+|.|..|+.
T Consensus 551 HQLSK~~--sQ~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kq---elvKkL~tg~kwiS~msihp~GDnli~ 624 (733)
T KOG0650|consen 551 HQLSKRK--SQSPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQ---ELVKKLLTGSKWISSMSIHPNGDNLIL 624 (733)
T ss_pred Eeccccc--ccCchhhcCCceeEEEecCCCceEEEEec-cceEEEehhHH---HHHHHHhcCCeeeeeeeecCCCCeEEE
Confidence 9998765 33455556678999999998888888866 68999999875 445555556678999999999999999
Q ss_pred EEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEE
Q psy14815 197 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 276 (479)
Q Consensus 197 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 276 (479)
|+.|+.+..||++-... +.+++..|...+++++|++.-.++++|+.||++.|+--.-...... +....++.
T Consensus 625 gs~d~k~~WfDldlssk---Pyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~q------npliVPlK 695 (733)
T KOG0650|consen 625 GSYDKKMCWFDLDLSSK---PYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQ------NPLIVPLK 695 (733)
T ss_pred ecCCCeeEEEEcccCcc---hhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhc------CCceEeee
Confidence 99999999999987653 5778889999999999999999999999999999985322211110 12235677
Q ss_pred EEeccc---cccEEEEEecCCCCeEEEEeCCCeEEEc
Q psy14815 277 TLSGHH---GRTIYDISWCHLTDLIATACGDDAIRIF 310 (479)
Q Consensus 277 ~~~~~~---~~~i~~l~~~~~~~~l~~~~~dg~i~vw 310 (479)
.+.+|. ...|.++.|+|...+|++++.||+|++|
T Consensus 696 ~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 696 RLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred eccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 888872 2358899999999999999999999998
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=217.62 Aligned_cols=209 Identities=22% Similarity=0.358 Sum_probs=172.9
Q ss_pred ccccCCcEEEEEECCC-CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEEe
Q psy14815 86 SDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vwd~ 163 (479)
+..|...+.++.|++. ..+|++|+.||+|++||++..+ ...++.+....|..+.|+| .+..|+++...|.+++||+
T Consensus 129 f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~--S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDl 206 (839)
T KOG0269|consen 129 FNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKK--SKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDL 206 (839)
T ss_pred hhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccc--ccccccccchhhhceeeccCCCceEEEecCCceEEEeec
Confidence 4689999999999984 5789999999999999999886 5566777888999999999 6789999999999999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE-EEE
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR-LAT 242 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s 242 (479)
|... ++...+..|.++|.|+.|+|++.+||+|+.|+.|+|||...... ....++. ...+|.++.|-|...+ |++
T Consensus 207 Rqp~--r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~--~~~~tIn-Tiapv~rVkWRP~~~~hLAt 281 (839)
T KOG0269|consen 207 RQPD--RCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRA--KPKHTIN-TIAPVGRVKWRPARSYHLAT 281 (839)
T ss_pred cCch--hHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCc--cceeEEe-ecceeeeeeeccCccchhhh
Confidence 9876 56778899999999999999999999999999999999986554 2233332 3578999999998654 666
Q ss_pred ee--CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC-CCCeEEEEeCCCeEEEcccCCCC
Q psy14815 243 CS--DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 243 ~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~-~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
++ .|-.|+|||++.+-- +..++..| ...++.++|.. |...+.+++.||+|..-.++...
T Consensus 282 csmv~dtsV~VWDvrRPYI--------------P~~t~~eH-~~~vt~i~W~~~d~~~l~s~sKD~tv~qh~~knat 343 (839)
T KOG0269|consen 282 CSMVVDTSVHVWDVRRPYI--------------PYATFLEH-TDSVTGIAWDSGDRINLWSCSKDGTVLQHLFKNAT 343 (839)
T ss_pred hhccccceEEEEeeccccc--------------cceeeecc-CccccceeccCCCceeeEeecCccHHHHhhhhccc
Confidence 65 477899999976643 35677776 88899999975 45578999999998766655543
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-24 Score=192.60 Aligned_cols=310 Identities=11% Similarity=0.235 Sum_probs=229.8
Q ss_pred cccccccceEEEEECC--CCCeEEEe--eCCCcEEEEeccccccccccc----------CCCccceEEEeecCCcEEEec
Q psy14815 6 TLKGHQGRVWNVSWNP--QGTMISSC--GEDKNIRLWVMVIREPYEKLH----------GLPVETSLRQLVEDKNIRLWG 71 (479)
Q Consensus 6 ~l~~h~~~V~~l~~s~--~~~~l~t~--~~dg~v~iwd~~~~~~~~~~~----------~~~~~~~~~~~~~~~~i~~w~ 71 (479)
.+-.-...|+|++||+ .|.+|+.. +.+..+.+||...+....... .||.+..++.....+.+.+|+
T Consensus 149 V~g~f~~GV~~vaFsk~~~G~~l~~vD~s~~h~lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~Gk~H~~Fw~ 228 (626)
T KOG2106|consen 149 VIGFFDRGVTCVAFSKINGGSLLCAVDDSNPHMLSVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCGKGHLYFWT 228 (626)
T ss_pred eeccccccceeeeecccCCCceEEEecCCCccccchhhchhhhccCcceeccceEEEEEeccCCCcEEEEeCCceEEEEE
Confidence 3345667899999998 45566554 456678999998766554433 468888999999999999998
Q ss_pred CCCCCCceeeeEE-eccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEE
Q psy14815 72 KESFGNKFTAKAI-LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA 150 (479)
Q Consensus 72 ~~~~~~~~~~~~~-~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~ 150 (479)
.+. .....+.- ......+.|.|++|.++|+ ++||..+|.|.||+..+.+ .......|.+.|.+++...+|.+ +
T Consensus 229 ~~~--~~l~k~~~~fek~ekk~Vl~v~F~engd-viTgDS~G~i~Iw~~~~~~--~~k~~~aH~ggv~~L~~lr~Gtl-l 302 (626)
T KOG2106|consen 229 LRG--GSLVKRQGIFEKREKKFVLCVTFLENGD-VITGDSGGNILIWSKGTNR--ISKQVHAHDGGVFSLCMLRDGTL-L 302 (626)
T ss_pred ccC--CceEEEeeccccccceEEEEEEEcCCCC-EEeecCCceEEEEeCCCce--EEeEeeecCCceEEEEEecCccE-e
Confidence 884 33333333 3333457899999999884 7899999999999997775 33344489999999999999875 4
Q ss_pred EEeCCCcEEEEEeCCCCc-----------ee--------------------------eeeeeeccccceeEEEEecCCCE
Q psy14815 151 TCSRDKSVWVWEVGEEDE-----------YE--------------------------CAAVINAHIQDVKKVRFHPFDNI 193 (479)
Q Consensus 151 ~~~~dg~i~vwd~~~~~~-----------~~--------------------------~~~~~~~~~~~v~~l~~~~~~~~ 193 (479)
+|+.|..|..||-.-.+. .+ ......+|......++.+|+.++
T Consensus 303 SGgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q 382 (626)
T KOG2106|consen 303 SGGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQ 382 (626)
T ss_pred ecCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhh
Confidence 599999999998321100 00 00123357777788999999999
Q ss_pred EEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceE
Q psy14815 194 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 273 (479)
Q Consensus 194 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 273 (479)
+++++.|+.+++|+ ..+..|.. .-..++.++.|+|.| .++.|+..|...+.|..+.
T Consensus 383 ~~T~gqdk~v~lW~--~~k~~wt~-----~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~---------------- 438 (626)
T KOG2106|consen 383 LLTCGQDKHVRLWN--DHKLEWTK-----IIEDPAECADFHPSG-VVAVGTATGRWFVLDTETQ---------------- 438 (626)
T ss_pred eeeccCcceEEEcc--CCceeEEE-----EecCceeEeeccCcc-eEEEeeccceEEEEecccc----------------
Confidence 99999999999999 22222221 234678899999999 9999999999999998442
Q ss_pred EEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 274 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 274 ~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
.+.++... ..+++.++|+|+|.+||.|+.|+.|++|.+.... .+ ....-+-+.++|+.+.||+|+++|...
T Consensus 439 ~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g-----~~---y~r~~k~~gs~ithLDwS~Ds~~~~~~ 509 (626)
T KOG2106|consen 439 DLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANG-----RK---YSRVGKCSGSPITHLDWSSDSQFLVSN 509 (626)
T ss_pred eeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCC-----cE---EEEeeeecCceeEEeeecCCCceEEec
Confidence 12333333 6799999999999999999999999999998765 11 222223344899999999999999655
Q ss_pred c
Q psy14815 354 N 354 (479)
Q Consensus 354 ~ 354 (479)
+
T Consensus 510 S 510 (626)
T KOG2106|consen 510 S 510 (626)
T ss_pred c
Confidence 4
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=198.90 Aligned_cols=295 Identities=18% Similarity=0.238 Sum_probs=223.1
Q ss_pred cccccccccceEEEEECCCC--CeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 4 SQTLKGHQGRVWNVSWNPQG--TMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~--~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
....+-|.+.|++++|+|.. +++|+|+.-|.|-+||+.+.++. ..
T Consensus 179 ~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d---------------------------------~d 225 (498)
T KOG4328|consen 179 LNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKD---------------------------------KD 225 (498)
T ss_pred cceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCc---------------------------------cC
Confidence 45566789999999999954 58889999999999998633321 11
Q ss_pred eEEeccccCCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 82 KAILSDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
.......|..+|.++.|+| +...+++.++||+|++-|++++..+.+..+......+.++.|+.+...++.+..-|...+
T Consensus 226 ~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~ 305 (498)
T KOG4328|consen 226 GVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNV 305 (498)
T ss_pred ceEEeccCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEE
Confidence 2233468999999999999 557899999999999999998876666666555667888999998888888888889999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
||+++.+ .....+..|...|++++++|. ..+|++++.|++.+|||+++......++.....|...|.+..|||++..
T Consensus 306 iD~R~~~--s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gt 383 (498)
T KOG4328|consen 306 IDLRTDG--SEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGT 383 (498)
T ss_pred EEeecCC--ccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCc
Confidence 9999875 334556678889999999994 5789999999999999999765433334556679999999999999988
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc--ccc--cEEEEEecCCCCeEEEEeCCCeEEEcccCCC
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH--HGR--TIYDISWCHLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
|++.+.|..|+|||..--... ..+..++... ++. ......|.|+..++++|..-..|-|+|-..+
T Consensus 384 l~TT~~D~~IRv~dss~~sa~-----------~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~ 452 (498)
T KOG4328|consen 384 LLTTCQDNEIRVFDSSCISAK-----------DEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGG 452 (498)
T ss_pred eEeeccCCceEEeeccccccc-----------CCccceeeccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCC
Confidence 999999999999997311000 0111121111 111 2345689999999999999999999998887
Q ss_pred CCCCCceeeEEEeccccccccceeEE-EecCCCCCCCcc
Q psy14815 316 AGDSDMVSFDLVHTEHRAHNQDVNCV-AWNPVVPEPQKT 353 (479)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~h~~~v~~~-~~sp~~~~l~~~ 353 (479)
+ .+..+.......|.++ .|+|-+..++.+
T Consensus 453 q---------~v~el~~P~~~tI~~vn~~HP~~~~~~aG 482 (498)
T KOG4328|consen 453 Q---------MVCELHDPESSTIPSVNEFHPMRDTLAAG 482 (498)
T ss_pred E---------EeeeccCccccccccceeecccccceecc
Confidence 6 4444433333355554 799998855444
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.7e-26 Score=215.28 Aligned_cols=209 Identities=18% Similarity=0.301 Sum_probs=168.6
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
.++..|+||.+.|.++.||.++ +|+++|.|.+||||++...++++.|
T Consensus 360 kP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~CL~~F-------------------------------- 406 (712)
T KOG0283|consen 360 KPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRKECLKVF-------------------------------- 406 (712)
T ss_pred cchhhhhccchhheecccccCC-eeEeccccccEEeecCCCcceeeEE--------------------------------
Confidence 4678899999999999999754 9999999999999999887777665
Q ss_pred eEEeccccCCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 82 KAILSDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
.|.+-|+|++|+| |.+++++|+-||.|+||++...+ ...-.. -..-|++++|.|||+..++|+.+|.+++
T Consensus 407 ------~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~--Vv~W~D-l~~lITAvcy~PdGk~avIGt~~G~C~f 477 (712)
T KOG0283|consen 407 ------SHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKK--VVDWND-LRDLITAVCYSPDGKGAVIGTFNGYCRF 477 (712)
T ss_pred ------ecCCeeEEEEecccCCCcEeecccccceEEeecCcCe--eEeehh-hhhhheeEEeccCCceEEEEEeccEEEE
Confidence 6999999999999 88999999999999999998875 233333 3378999999999999999999999999
Q ss_pred EEeCCCCceeeeeee------eccccceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCC--ccEEEE
Q psy14815 161 WEVGEEDEYECAAVI------NAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLKSHT--STVWSL 231 (479)
Q Consensus 161 wd~~~~~~~~~~~~~------~~~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~--~~v~~~ 231 (479)
|+.+..+........ ..|. .|+.+.|.|. ...+++.+.|..|+|||.+.... +..++++. ..-...
T Consensus 478 Y~t~~lk~~~~~~I~~~~~Kk~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~l----v~KfKG~~n~~SQ~~A 552 (712)
T KOG0283|consen 478 YDTEGLKLVSDFHIRLHNKKKKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDL----VHKFKGFRNTSSQISA 552 (712)
T ss_pred EEccCCeEEEeeeEeeccCccccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchhh----hhhhcccccCCcceee
Confidence 999886422211111 1233 7999999984 34688888999999999975443 45555432 223466
Q ss_pred EEccCCCEEEEeeCCCeEEEEeccCC
Q psy14815 232 AFDRIGSRLATCSDDATVKIWKEYKP 257 (479)
Q Consensus 232 ~~~~~~~~l~s~~~dg~i~iwd~~~~ 257 (479)
.|+.||++|+++++|..|++|++...
T Consensus 553 sfs~Dgk~IVs~seDs~VYiW~~~~~ 578 (712)
T KOG0283|consen 553 SFSSDGKHIVSASEDSWVYIWKNDSF 578 (712)
T ss_pred eEccCCCEEEEeecCceEEEEeCCCC
Confidence 88999999999999999999998543
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-25 Score=188.46 Aligned_cols=289 Identities=19% Similarity=0.314 Sum_probs=206.6
Q ss_pred eEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcE
Q psy14815 14 VWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 93 (479)
Q Consensus 14 V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v 93 (479)
...+.|+|||..|++-+.|..+++|++...-.-.... + .................|
T Consensus 52 ~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~--------------~----------~~~~~~~~~~r~~eg~tv 107 (406)
T KOG2919|consen 52 LKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKAD--------------G----------PLNFSKHLSYRYQEGETV 107 (406)
T ss_pred hccceeCCCCceEEeecccCeeeEEecChhhcccCCC--------------C----------ccccccceeEEeccCCEE
Confidence 4567899999999999999999999875322111100 0 000111111222345667
Q ss_pred EEEEEC-------CCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCC---cEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 94 RETAWS-------PCGNFIASASFDATTAVWDKRSGQFECNATLEGHEN---EVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 94 ~~v~~~-------~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~---~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
...+|- |+..++++.+.+.-|++||.-+|+.+.....-.|.. ...+++|+|||.+|++| ....|++||+
T Consensus 108 ydy~wYs~M~s~qP~t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykrcirvFdt 186 (406)
T KOG2919|consen 108 YDYCWYSRMKSDQPSTNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKRCIRVFDT 186 (406)
T ss_pred EEEEeeeccccCCCccceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccceEEEeec
Confidence 777775 567899999999999999999998554444444444 34689999999999988 5589999999
Q ss_pred -CCCCceeeeeee----eccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC
Q psy14815 164 -GEEDEYECAAVI----NAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG 237 (479)
Q Consensus 164 -~~~~~~~~~~~~----~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 237 (479)
+.+.......++ .+..+-+.+++|+| +...++.|+....+-||.-.... ++..+.+|.+.|+.++|.++|
T Consensus 187 ~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~----pl~llggh~gGvThL~~~edG 262 (406)
T KOG2919|consen 187 SRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRR----PLQLLGGHGGGVTHLQWCEDG 262 (406)
T ss_pred cCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCC----ceeeecccCCCeeeEEeccCc
Confidence 444322222222 12356688999999 55699999999999898877555 477788999999999999999
Q ss_pred CEEEEeeC-CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccc--cEEEEEecCCCCeEEEEeCCCeEEEcccCC
Q psy14815 238 SRLATCSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR--TIYDISWCHLTDLIATACGDDAIRIFKENP 314 (479)
Q Consensus 238 ~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~ 314 (479)
+.|++|+. |-.|..||++....+ +..+..|.+. .-.-....|++++|++|+.||.|++||++.
T Consensus 263 n~lfsGaRk~dkIl~WDiR~~~~p--------------v~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~ 328 (406)
T KOG2919|consen 263 NKLFSGARKDDKILCWDIRYSRDP--------------VYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKD 328 (406)
T ss_pred CeecccccCCCeEEEEeehhccch--------------hhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCC
Confidence 99999884 678999999876543 3333333221 112345568999999999999999999988
Q ss_pred CCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 315 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
... .......|...++.++++|.-+.++.++
T Consensus 329 ~gn---------~~sv~~~~sd~vNgvslnP~mpilatss 359 (406)
T KOG2919|consen 329 LGN---------EVSVTGNYSDTVNGVSLNPIMPILATSS 359 (406)
T ss_pred CCC---------cccccccccccccceecCcccceeeecc
Confidence 331 2334457888999999999988887764
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.9e-25 Score=195.78 Aligned_cols=282 Identities=17% Similarity=0.196 Sum_probs=215.5
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
.++|+++.|+|..++|++|+.||+++||.+...... .+ ....-..
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~-~l----------------------------------qS~~l~~ 257 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNP-KL----------------------------------QSIHLEK 257 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcEEEEEecCccCh-hh----------------------------------eeeeecc
Confidence 478999999999999999999999999987532210 00 0112245
Q ss_pred CcEEEEEECCCCC-EEEEEECCCeEEEEECCCCeEEEeEEEeCCC-CcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc
Q psy14815 91 RTIRETAWSPCGN-FIASASFDATTAVWDKRSGQFECNATLEGHE-NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 91 ~~v~~v~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 168 (479)
.+|.+.+|.|+|. .+++++.....+.||+.+.+...+..+.++. ..+.....++++++|+..+..|.|.+....++
T Consensus 258 fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~-- 335 (514)
T KOG2055|consen 258 FPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTK-- 335 (514)
T ss_pred CccceeeecCCCceEEEecccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhh--
Confidence 7899999999998 8999999999999999998866666666654 35677888999999999999999999998887
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC-CCccEEEEEEccCCCEEEEeeCCC
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS-HTSTVWSLAFDRIGSRLATCSDDA 247 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg 247 (479)
+.+..++- .+.|+.++|+.+++.|++.+.+|.|.+||+++... +..+.. ..-.-++++.++++.+||+|+..|
T Consensus 336 -eli~s~Ki-eG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~----~~rf~D~G~v~gts~~~S~ng~ylA~GS~~G 409 (514)
T KOG2055|consen 336 -ELITSFKI-EGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSC----LHRFVDDGSVHGTSLCISLNGSYLATGSDSG 409 (514)
T ss_pred -hhhheeee-ccEEeeEEEecCCcEEEEEcCCceEEEEecCCcce----EEEEeecCccceeeeeecCCCceEEeccCcc
Confidence 44444432 56799999999999999999999999999997643 333332 112346788889999999999999
Q ss_pred eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeC--CCeEEEcccCCCCCCCCceeeE
Q psy14815 248 TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG--DDAIRIFKENPEAGDSDMVSFD 325 (479)
Q Consensus 248 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~--dg~i~vw~~~~~~~~~~~~~~~ 325 (479)
.|.|||....... ...+++.++..- ...|+++.|+|+.++||.+|. +..+|+-.+.+..
T Consensus 410 iVNIYd~~s~~~s---------~~PkPik~~dNL-tt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~T--------- 470 (514)
T KOG2055|consen 410 IVNIYDGNSCFAS---------TNPKPIKTVDNL-TTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCT--------- 470 (514)
T ss_pred eEEEeccchhhcc---------CCCCchhhhhhh-heeeeeeeeCcchhhhhhhhhccccceEEEecccee---------
Confidence 9999996543221 222445555554 668999999999999888875 5789998887764
Q ss_pred EEeccc--cccccceeEEEecCCCCCCCccc
Q psy14815 326 LVHTEH--RAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 326 ~~~~~~--~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.....+ ...-+.|+|++|||.+-+||.+.
T Consensus 471 VFsNfP~~n~~vg~vtc~aFSP~sG~lAvGN 501 (514)
T KOG2055|consen 471 VFSNFPTSNTKVGHVTCMAFSPNSGYLAVGN 501 (514)
T ss_pred eeccCCCCCCcccceEEEEecCCCceEEeec
Confidence 111111 12336799999999999998775
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.9e-26 Score=207.44 Aligned_cols=302 Identities=16% Similarity=0.206 Sum_probs=235.2
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccc--cccccccCC-----------CccceEEEeecCCcEEEe
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIR--EPYEKLHGL-----------PVETSLRQLVEDKNIRLW 70 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~--~~~~~~~~~-----------~~~~~~~~~~~~~~i~~w 70 (479)
+.+++.|.+.|+.+....+++.|+++|.|-+|++|+...+ -++..+..| +....+++++-|+.|++|
T Consensus 66 ~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflW 145 (735)
T KOG0308|consen 66 IASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLW 145 (735)
T ss_pred hhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEE
Confidence 5678999999999999999999999999999999998876 455555554 345667788899999999
Q ss_pred cCCCCCC------ceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC
Q psy14815 71 GKESFGN------KFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK 144 (479)
Q Consensus 71 ~~~~~~~------~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~ 144 (479)
|++.... ..........++..+|++++.++.|..+++|+..+.+++||.++++ .+..+.+|...|.++..++
T Consensus 146 Din~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~--kimkLrGHTdNVr~ll~~d 223 (735)
T KOG0308|consen 146 DINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCK--KIMKLRGHTDNVRVLLVND 223 (735)
T ss_pred EccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEecccccc--ceeeeeccccceEEEEEcC
Confidence 9995422 1111112223899999999999999999999999999999999986 6788889999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCC
Q psy14815 145 NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSH 224 (479)
Q Consensus 145 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 224 (479)
||+.+++++.||+|++||+... +++.++..|...|.++..+|+-..+.+|+.||.|..=|+++... ...+-..
T Consensus 224 DGt~~ls~sSDgtIrlWdLgqQ---rCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~----~tlick~ 296 (735)
T KOG0308|consen 224 DGTRLLSASSDGTIRLWDLGQQ---RCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPAK----STLICKE 296 (735)
T ss_pred CCCeEeecCCCceEEeeecccc---ceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCchh----heEeecC
Confidence 9999999999999999999887 78888999999999999999999999999999999999997532 2222234
Q ss_pred CccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCC---CCC---C----CceEEEEEEeccccccEEEEEecCC
Q psy14815 225 TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPT---PDN---D----SVWKCVCTLSGHHGRTIYDISWCHL 294 (479)
Q Consensus 225 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~---~----~~~~~~~~~~~~~~~~i~~l~~~~~ 294 (479)
..+|..+..+...+-+-+++.|+.|+-|............. ... . ....+-..+.| +.+|...+.-.|
T Consensus 297 daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~~~~l~~s~~~~~~~T~~~~~~~~~~~tp~~vi~G--g~ai~k~~mL~d 374 (735)
T KOG0308|consen 297 DAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEPDIALSVSGDLDFFSTDSNNHSCDLTNTPDSVIPG--GAAIKKHAMLND 374 (735)
T ss_pred CCchhhhhhccccCCceeeeccccceecCCccccccccCCCCCcccccCCCccccccCCCceeccC--chhhhhhhhhcC
Confidence 56677777776666667888999999997654332211100 000 0 00011222333 446666677778
Q ss_pred CCeEEEEeCCCeEEEcccCCCC
Q psy14815 295 TDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 295 ~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
.+++++=...|.+.+||+-...
T Consensus 375 kRhVlTkDa~gnv~lwDIl~~~ 396 (735)
T KOG0308|consen 375 KRHVLTKDAKGNVALWDILACV 396 (735)
T ss_pred cceEeeecCCCCEEEEEeeeee
Confidence 8899999999999999986543
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-26 Score=216.25 Aligned_cols=233 Identities=22% Similarity=0.367 Sum_probs=204.9
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCC
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 166 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~ 166 (479)
..|...+.++..-..++.+++|+.|..+-+|.+.... .+..+.+|..+|.++.|+++..+|++|+.+|+|++||+...
T Consensus 25 ~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~--~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeA 102 (825)
T KOG0267|consen 25 VAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPN--AITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEA 102 (825)
T ss_pred hhhhhhhceeeeeccceeeccCCCceeeccccccCCc--hhheeeccCCcceeeecCcchhhhcccccCCceeeeehhhh
Confidence 4688889998887788999999999999999986654 66779999999999999999999999999999999999987
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCC
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD 246 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 246 (479)
..+..+.+|...+.++.|+|.+.+.+.|+.|+.+++||.+... +...+.+|...|..+.|+|+|++++++++|
T Consensus 103 ---k~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~G----c~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed 175 (825)
T KOG0267|consen 103 ---KIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKG----CSHTYKSHTRVVDVLRLSPDGRWVASGGED 175 (825)
T ss_pred ---hhhhhhhccccCcceeeeccceEEeccccccccceehhhhccC----ceeeecCCcceeEEEeecCCCceeeccCCc
Confidence 6677899999999999999999999999999999999999655 377788899999999999999999999999
Q ss_pred CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEE
Q psy14815 247 ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 326 (479)
Q Consensus 247 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~ 326 (479)
..++|||...+ +....|..| ...+.++.|+|..-++++|+.|+++++||+++.+ .
T Consensus 176 ~tvki~d~~ag---------------k~~~ef~~~-e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe---------~ 230 (825)
T KOG0267|consen 176 NTVKIWDLTAG---------------KLSKEFKSH-EGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFE---------V 230 (825)
T ss_pred ceeeeeccccc---------------ccccccccc-cccccccccCchhhhhccCCCCceeeeeccceeE---------E
Confidence 99999998544 556677776 7889999999999999999999999999999765 3
Q ss_pred EeccccccccceeEEEecCCCCCCCccc
Q psy14815 327 VHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 327 ~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+.. .......|.+.+|+|++..+..+.
T Consensus 231 I~s-~~~~~~~v~~~~fn~~~~~~~~G~ 257 (825)
T KOG0267|consen 231 ISS-GKPETDGVRSLAFNPDGKIVLSGE 257 (825)
T ss_pred eec-cCCccCCceeeeecCCceeeecCc
Confidence 333 344578899999999999886653
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-25 Score=199.96 Aligned_cols=260 Identities=14% Similarity=0.211 Sum_probs=214.7
Q ss_pred EEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEE
Q psy14815 59 RQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVK 138 (479)
Q Consensus 59 ~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~ 138 (479)
+..+..+.|++||+...++.......-.......|.++...|||+.|++|++-.++.|||+..........+....-..+
T Consensus 434 VyTgGkgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTprikaeltssapaCy 513 (705)
T KOG0639|consen 434 VYTGGKGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACY 513 (705)
T ss_pred eEecCCCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhcCCcchhhh
Confidence 33446688999999976655544444334456789999999999999999999999999998876555555655556788
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEee
Q psy14815 139 SVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 218 (479)
Q Consensus 139 ~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 218 (479)
+++.+||.+..++++.||.|.|||+++. ..++.+.+|...+.||..+++|..|.+|+-|.+||-||++.+.. +
T Consensus 514 ALa~spDakvcFsccsdGnI~vwDLhnq---~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrq----l 586 (705)
T KOG0639|consen 514 ALAISPDAKVCFSCCSDGNIAVWDLHNQ---TLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQ----L 586 (705)
T ss_pred hhhcCCccceeeeeccCCcEEEEEcccc---eeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhh----h
Confidence 9999999999999999999999999987 77889999999999999999999999999999999999997653 1
Q ss_pred eeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeE
Q psy14815 219 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI 298 (479)
Q Consensus 219 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l 298 (479)
. -....+.|.++.++|++.+++.|-.++.+.+-....+.+ ..+..| +..|.++.|.+-|+++
T Consensus 587 q-qhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~k----------------yqlhlh-eScVLSlKFa~cGkwf 648 (705)
T KOG0639|consen 587 Q-QHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEK----------------YQLHLH-ESCVLSLKFAYCGKWF 648 (705)
T ss_pred h-hhhhhhhheecccCCCccceeeecccCcEEEEecCCccc----------------eeeccc-ccEEEEEEecccCcee
Confidence 1 122457899999999999999999999998887654432 334444 8899999999999999
Q ss_pred EEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 299 ATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 299 ~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
++.+.|+.+..|...-+. .+.+ ....++|.++..|-|.+++..++
T Consensus 649 vStGkDnlLnawrtPyGa---------siFq--skE~SsVlsCDIS~ddkyIVTGS 693 (705)
T KOG0639|consen 649 VSTGKDNLLNAWRTPYGA---------SIFQ--SKESSSVLSCDISFDDKYIVTGS 693 (705)
T ss_pred eecCchhhhhhccCcccc---------ceee--ccccCcceeeeeccCceEEEecC
Confidence 999999999999998876 1222 23567899999999999997765
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-24 Score=187.50 Aligned_cols=274 Identities=19% Similarity=0.358 Sum_probs=198.9
Q ss_pred cccccceEEEEECCCC--CeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 8 KGHQGRVWNVSWNPQG--TMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 8 ~~h~~~V~~l~~s~~~--~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
-+|.+.|+.+.-++-+ .+.++-+..|.|+||++... +..+.. .+. .+ ..........
T Consensus 148 i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~--l~~l~~------------~~~-~~------~~s~~~Pl~t 206 (440)
T KOG0302|consen 148 IPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPH--LNALSE------------PGL-EV------KDSEFRPLFT 206 (440)
T ss_pred cccccccceeeecccCCcceeeeecccCcEEEEEchhh--hhhhcC------------ccc-cc------cccccCceEE
Confidence 3688888888888755 45666678999999997432 111110 000 00 0011122233
Q ss_pred ccccCCcEEEEEECCC-CCEEEEEECCCeEEEEECCCCeEEE-eEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEE
Q psy14815 86 SDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFEC-NATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vwd 162 (479)
..+|...=+.++|||- ...|++|..-+.|++|...++.+.. ...+.+|+..|..++||| ....|++|+.||+|+|||
T Consensus 207 ~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWD 286 (440)
T KOG0302|consen 207 FNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWD 286 (440)
T ss_pred ecccCccceeeecccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEE
Confidence 4688899999999993 3468888888899999999887542 345667999999999999 456899999999999999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC-CEEE
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SRLA 241 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~ 241 (479)
+|.+....++.. +.|.+.|+.+.|+....+|++|+.||+++|||+++-+.. .++..+..|..+|+++.|+|.. ..|+
T Consensus 287 iRs~~~~~~~~~-kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~-~pVA~fk~Hk~pItsieW~p~e~s~ia 364 (440)
T KOG0302|consen 287 IRSGPKKAAVST-KAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSG-QPVATFKYHKAPITSIEWHPHEDSVIA 364 (440)
T ss_pred ecCCCccceeEe-eccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCC-CcceeEEeccCCeeEEEeccccCceEE
Confidence 999865455444 899999999999998889999999999999999987643 6788899999999999999864 5678
Q ss_pred EeeCCCeEEEEeccCCCCCCCCCCCC----CCCceEEEEEEeccccccEEEEEecCCC-CeEEEEeCCCe
Q psy14815 242 TCSDDATVKIWKEYKPGNSAGIPTPD----NDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDA 306 (479)
Q Consensus 242 s~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~l~~~~~~-~~l~~~~~dg~ 306 (479)
+++.|.+|.+||+............. .+-...++....+ ...+..+.|++.- .++++.+.||.
T Consensus 365 asg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqG--Qke~KevhWH~QiPG~lvsTa~dGf 432 (440)
T KOG0302|consen 365 ASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQG--QKEVKEVHWHRQIPGLLVSTAIDGF 432 (440)
T ss_pred eccCCCcEEEEEeeccCChhhhccccccchhcCCceeEEEecc--hhHhhhheeccCCCCeEEEecccce
Confidence 88899999999986544321111000 0111233444444 4578899999863 47888888865
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-23 Score=177.19 Aligned_cols=219 Identities=16% Similarity=0.237 Sum_probs=166.2
Q ss_pred CCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEc
Q psy14815 64 DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWS 143 (479)
Q Consensus 64 ~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~ 143 (479)
|.+|+..++.+ +.....+.||...|..++.+|-+..+++++.|++|++||++..+.. ..+... .-..++|.
T Consensus 79 d~tIryLsl~d-----NkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cq--g~l~~~--~~pi~AfD 149 (311)
T KOG1446|consen 79 DDTIRYLSLHD-----NKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQ--GLLNLS--GRPIAAFD 149 (311)
T ss_pred CCceEEEEeec-----CceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCc--eEEecC--CCcceeEC
Confidence 55555555542 2233345899999999999998899999999999999999977633 333322 23467899
Q ss_pred CCCCEEEEEeCCCcEEEEEeCCCCceeeeeeee---ccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeee
Q psy14815 144 KNGQFLATCSRDKSVWVWEVGEEDEYECAAVIN---AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT 220 (479)
Q Consensus 144 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~---~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 220 (479)
|+|-++|++.....|++||++.-.. .+...+. .-....+.+.|+|+|+.++.++..+.+++.|.-.+.. ..+
T Consensus 150 p~GLifA~~~~~~~IkLyD~Rs~dk-gPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~----~~t 224 (311)
T KOG1446|consen 150 PEGLIFALANGSELIKLYDLRSFDK-GPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTV----KST 224 (311)
T ss_pred CCCcEEEEecCCCeEEEEEecccCC-CCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcE----eee
Confidence 9999999999888999999997532 2222222 3356789999999999999999999999999887763 344
Q ss_pred ecCCCcc---EEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCe
Q psy14815 221 LKSHTST---VWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDL 297 (479)
Q Consensus 221 ~~~~~~~---v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~ 297 (479)
+..+... -.+.+|+|+++++++|+.||+|.+|+++.+ ..+..+.+.+..++.++.|+|.-..
T Consensus 225 fs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg---------------~~v~~~~~~~~~~~~~~~fnP~~~m 289 (311)
T KOG1446|consen 225 FSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETG---------------KKVAVLRGPNGGPVSCVRFNPRYAM 289 (311)
T ss_pred EeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCC---------------cEeeEecCCCCCCccccccCCceee
Confidence 4433322 257789999999999999999999998443 5567777755889999999998766
Q ss_pred EEEEeCCCeEEEcccC
Q psy14815 298 IATACGDDAIRIFKEN 313 (479)
Q Consensus 298 l~~~~~dg~i~vw~~~ 313 (479)
++++ +..+.+|=..
T Consensus 290 f~sa--~s~l~fw~p~ 303 (311)
T KOG1446|consen 290 FVSA--SSNLVFWLPD 303 (311)
T ss_pred eeec--CceEEEEecc
Confidence 7666 4577788544
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-24 Score=192.88 Aligned_cols=246 Identities=17% Similarity=0.227 Sum_probs=196.6
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
.++|.|++-+|+|.+|+.|+..|.+.+|.+.+|..+..+ .+|-
T Consensus 81 Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~-------------------------------------~aHY 123 (476)
T KOG0646|consen 81 PGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVL-------------------------------------SAHY 123 (476)
T ss_pred ccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHH-------------------------------------Hhhc
Confidence 478999999999999999989999999999999988776 5799
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECC-------CCeEEEeEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCcEEEE
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKR-------SGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVWVW 161 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~-------~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~vw 161 (479)
..|+|+.|+-||.+|+||+.||.|.+|.+. +....+...+..|.-+|+++...+. ..+++|++.|.++++|
T Consensus 124 Q~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~w 203 (476)
T KOG0646|consen 124 QSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLW 203 (476)
T ss_pred cceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEE
Confidence 999999999999999999999999999863 2334577889999999999998764 3589999999999999
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcc------------cceEeeeeecCCCc--c
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE------------ADWINFATLKSHTS--T 227 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~------------~~~~~~~~~~~~~~--~ 227 (479)
|+..+. .+..+ ..+..+.+++.+|-++.+.+|+.+|.|.+.++.+.. .....+..+.+|.+ .
T Consensus 204 dlS~g~---LLlti-~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ 279 (476)
T KOG0646|consen 204 DLSLGV---LLLTI-TFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESA 279 (476)
T ss_pred Eeccce---eeEEE-ecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcc
Confidence 999883 33332 235779999999999999999999999998876543 12234566778888 9
Q ss_pred EEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEE-eCCCe
Q psy14815 228 VWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA-CGDDA 306 (479)
Q Consensus 228 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~-~~dg~ 306 (479)
|+|++++-||..|++|+.||.|+|||+... .+++++... .++|+.+.+.|-.+-.+.+ ...-.
T Consensus 280 ITcLais~DgtlLlSGd~dg~VcvWdi~S~---------------Q~iRtl~~~-kgpVtnL~i~~~~~~~~l~~~~~ps 343 (476)
T KOG0646|consen 280 ITCLAISTDGTLLLSGDEDGKVCVWDIYSK---------------QCIRTLQTS-KGPVTNLQINPLERGIILFEHKQPS 343 (476)
T ss_pred eeEEEEecCccEEEeeCCCCCEEEEecchH---------------HHHHHHhhh-ccccceeEeeccccceecccccCcc
Confidence 999999999999999999999999998443 445555532 6789999887653333322 22334
Q ss_pred EEEcccC
Q psy14815 307 IRIFKEN 313 (479)
Q Consensus 307 i~vw~~~ 313 (479)
+-.|++.
T Consensus 344 ~~~~~lk 350 (476)
T KOG0646|consen 344 LPNPHLK 350 (476)
T ss_pred CCchHhh
Confidence 4445443
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.2e-26 Score=213.07 Aligned_cols=238 Identities=22% Similarity=0.384 Sum_probs=203.9
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEE
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAI 84 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~ 84 (479)
+.+-.|...|.|+..-..++.+++|+.|-.+.+|.+.....+..
T Consensus 22 ~~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S------------------------------------ 65 (825)
T KOG0267|consen 22 REFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITS------------------------------------ 65 (825)
T ss_pred hhhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhhe------------------------------------
Confidence 34556888888888766778888888888888887643332221
Q ss_pred eccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeC
Q psy14815 85 LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 164 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~ 164 (479)
+.+|..+|.++.|+++..+|++|+.+|+|++||++..+ .++++.+|...+.++.|+|-+.+++.|+.|+.+++||++
T Consensus 66 -~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk--~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~R 142 (825)
T KOG0267|consen 66 -LTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAK--IVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIR 142 (825)
T ss_pred -eeccCCcceeeecCcchhhhcccccCCceeeeehhhhh--hhhhhhccccCcceeeeccceEEeccccccccceehhhh
Confidence 36899999999999999999999999999999999886 677899999999999999999999999999999999999
Q ss_pred CCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee
Q psy14815 165 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244 (479)
Q Consensus 165 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 244 (479)
.. .+...+.+|...+.++.|+|+|++++.|++|.++++||+..++. ...+..|.+.+..+.|+|..-.+++|+
T Consensus 143 k~---Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~----~~ef~~~e~~v~sle~hp~e~Lla~Gs 215 (825)
T KOG0267|consen 143 KK---GCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKL----SKEFKSHEGKVQSLEFHPLEVLLAPGS 215 (825)
T ss_pred cc---CceeeecCCcceeEEEeecCCCceeeccCCcceeeeeccccccc----ccccccccccccccccCchhhhhccCC
Confidence 66 66778888999999999999999999999999999999987764 778899999999999999998999999
Q ss_pred CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC
Q psy14815 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 304 (479)
Q Consensus 245 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d 304 (479)
.|+++++||++ ++..+...... ...|.+.+|+|++..+++|...
T Consensus 216 ~d~tv~f~dle---------------tfe~I~s~~~~-~~~v~~~~fn~~~~~~~~G~q~ 259 (825)
T KOG0267|consen 216 SDRTVRFWDLE---------------TFEVISSGKPE-TDGVRSLAFNPDGKIVLSGEQI 259 (825)
T ss_pred CCceeeeeccc---------------eeEEeeccCCc-cCCceeeeecCCceeeecCchh
Confidence 99999999983 33444444443 6689999999999988887654
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.7e-23 Score=183.16 Aligned_cols=315 Identities=17% Similarity=0.255 Sum_probs=228.6
Q ss_pred cccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC----------CccceEEEeecCCcEEEecCCCCCC
Q psy14815 8 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL----------PVETSLRQLVEDKNIRLWGKESFGN 77 (479)
Q Consensus 8 ~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~~i~~w~~~~~~~ 77 (479)
..|.+.|.+++...+|.+|- |+.|+.|..|| ..-+.+...... +....++.+...+.|..=.++
T Consensus 284 ~aH~ggv~~L~~lr~GtllS-GgKDRki~~Wd-~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~---- 357 (626)
T KOG2106|consen 284 HAHDGGVFSLCMLRDGTLLS-GGKDRKIILWD-DNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLE---- 357 (626)
T ss_pred eecCCceEEEEEecCccEee-cCccceEEecc-ccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeec----
Confidence 38999999999999997655 99999999998 332222222211 111224444444444433333
Q ss_pred ceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc
Q psy14815 78 KFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 157 (479)
Q Consensus 78 ~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~ 157 (479)
........+|.+..+.++.+|+.+.++|++.|+.+++|+ ..+.+-... -..++.|+.|+|.| .++.|+..|.
T Consensus 358 --~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~---~~d~~~~~~fhpsg-~va~Gt~~G~ 429 (626)
T KOG2106|consen 358 --NGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKI---IEDPAECADFHPSG-VVAVGTATGR 429 (626)
T ss_pred --CCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEE---ecCceeEeeccCcc-eEEEeeccce
Confidence 233344578999999999999999999999999999999 333222222 34688999999999 8999999999
Q ss_pred EEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC
Q psy14815 158 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG 237 (479)
Q Consensus 158 i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 237 (479)
..+.|.++. ..+..-.. ..++++++|+|+|.+||.|+.|+.|++|-+......+....... ..+|+.+.|++|+
T Consensus 430 w~V~d~e~~---~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~--gs~ithLDwS~Ds 503 (626)
T KOG2106|consen 430 WFVLDTETQ---DLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCS--GSPITHLDWSSDS 503 (626)
T ss_pred EEEEecccc---eeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeec--CceeEEeeecCCC
Confidence 999999885 34444444 78999999999999999999999999999987665444444444 4899999999999
Q ss_pred CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCce---EEEE---EEeccccccEEEEEecCCCCeEEEEeCCCeEEEcc
Q psy14815 238 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW---KCVC---TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 238 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~ 311 (479)
+++.+-+.|-.|..|....-.+... ..+..| .|.. .+-+.++..|..++-+...+++++|...|.|++|.
T Consensus 504 ~~~~~~S~d~eiLyW~~~~~~~~ts----~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~~~~~lA~gdd~g~v~lf~ 579 (626)
T KOG2106|consen 504 QFLVSNSGDYEILYWKPSECKQITS----VKDVKWATYTCTLGFEVFGGSDGTDINAVARSHCEKLLASGDDFGKVHLFS 579 (626)
T ss_pred ceEEeccCceEEEEEccccCcccce----ecceeeeeeEEEEEEEEecccCCchHHHhhhhhhhhhhhccccCceEEEEc
Confidence 9999999999999994322222111 111112 2222 22234566788888888999999999999999999
Q ss_pred cCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 312 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
..-.+... ....+.+|.+.|++++|.-....|...
T Consensus 580 yPc~s~rA-------~~he~~ghs~~vt~V~Fl~~d~~li~t 614 (626)
T KOG2106|consen 580 YPCSSPRA-------PSHEYGGHSSHVTNVAFLCKDSHLIST 614 (626)
T ss_pred cccCCCcc-------cceeeccccceeEEEEEeeCCceEEec
Confidence 87655221 223346899999999999887776443
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.5e-25 Score=190.31 Aligned_cols=235 Identities=19% Similarity=0.276 Sum_probs=186.8
Q ss_pred ccccCCcEEEEEECCCC-CEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeC
Q psy14815 86 SDGHQRTIRETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 164 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~ 164 (479)
+.+|.+.|.|++=+|.. ..+++|+.||.|+|||+.+.. +...++.|.+.|..|++.. ..+++++.|.+|+.|.+.
T Consensus 62 L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~--~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~ 137 (433)
T KOG0268|consen 62 LDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRE--CIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKID 137 (433)
T ss_pred ccccccccchhhcCcchhhhhhccccCceEEEEehhhhh--hhheeecccCceeeEEecc--cceEEecCCcceeeeecc
Confidence 37999999999999976 889999999999999999885 7889999999999999986 678899999999999754
Q ss_pred CCC---------------------------c--------eeeeeeeeccccceeEEEEecC-CCEEEEEEcCCcEEEEec
Q psy14815 165 EED---------------------------E--------YECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKE 208 (479)
Q Consensus 165 ~~~---------------------------~--------~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~ 208 (479)
... . -.+++.+.-....|.++.|+|. ...|++++.|+.|.+||+
T Consensus 138 ~~p~~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~ 217 (433)
T KOG0268|consen 138 GPPLHTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDL 217 (433)
T ss_pred CCcceeeeccccccccccccccccccccCceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEec
Confidence 310 0 0111222223345788889994 467888889999999999
Q ss_pred CCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEE
Q psy14815 209 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYD 288 (479)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 288 (479)
++..+..+.+..+ .-+.++|+|.+-.+.+|++|..++.||++.... ++....+| .+.|.+
T Consensus 218 R~~~Pl~KVi~~m-----RTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~--------------p~~v~~dh-vsAV~d 277 (433)
T KOG0268|consen 218 RQASPLKKVILTM-----RTNTICWNPEAFNFVAANEDHNLYTYDMRNLSR--------------PLNVHKDH-VSAVMD 277 (433)
T ss_pred ccCCccceeeeec-----cccceecCccccceeeccccccceehhhhhhcc--------------cchhhccc-ceeEEE
Confidence 9887633333333 346789999887889999999999999976654 35667776 889999
Q ss_pred EEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccc-cccccceeEEEecCCCCCCCccc
Q psy14815 289 ISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH-RAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 289 l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+.|+|.|+-+++||.|.+|+||..+.+. .+.++ ....+.|.|+.||.|.+++.+++
T Consensus 278 VdfsptG~EfvsgsyDksIRIf~~~~~~----------SRdiYhtkRMq~V~~Vk~S~Dskyi~SGS 334 (433)
T KOG0268|consen 278 VDFSPTGQEFVSGSYDKSIRIFPVNHGH----------SRDIYHTKRMQHVFCVKYSMDSKYIISGS 334 (433)
T ss_pred eccCCCcchhccccccceEEEeecCCCc----------chhhhhHhhhheeeEEEEeccccEEEecC
Confidence 9999999999999999999999998876 22222 22346899999999999997664
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.7e-24 Score=178.32 Aligned_cols=277 Identities=12% Similarity=0.174 Sum_probs=200.1
Q ss_pred eEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcE
Q psy14815 14 VWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 93 (479)
Q Consensus 14 V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v 93 (479)
-.|+.|++-|.+||+|+.||.|.|||+.+...-..+ .+|..+|
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~l-------------------------------------saH~~pi 68 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARML-------------------------------------SAHVRPI 68 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhh-------------------------------------hccccce
Confidence 789999999999999999999999999876644333 6899999
Q ss_pred EEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEEeCCCCceeee
Q psy14815 94 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECA 172 (479)
Q Consensus 94 ~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~ 172 (479)
++++||++|++|+|++.|..|.+||+..|. +...+. ..++|+.+.|+|.. +.+++.-.+..-.+-++..+.. ..+
T Consensus 69 ~sl~WS~dgr~LltsS~D~si~lwDl~~gs--~l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h-~~L 144 (405)
T KOG1273|consen 69 TSLCWSRDGRKLLTSSRDWSIKLWDLLKGS--PLKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKH-SVL 144 (405)
T ss_pred eEEEecCCCCEeeeecCCceeEEEeccCCC--ceeEEE-ccCccceeeeccccCCeEEEEEecCCcEEEEecCCce-eec
Confidence 999999999999999999999999999997 444444 45799999999943 4444444555566666665321 111
Q ss_pred eeee--ccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCC-ccEEEEEEccCCCEEEEeeCCCeE
Q psy14815 173 AVIN--AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT-STVWSLAFDRIGSRLATCSDDATV 249 (479)
Q Consensus 173 ~~~~--~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~~~dg~i 249 (479)
..-. .-.....+..|.+.|+++++|...|.+.++|..+.+ ++..++-.. ..|..+.++..|++|+..+.|..|
T Consensus 145 p~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e----~vas~rits~~~IK~I~~s~~g~~liiNtsDRvI 220 (405)
T KOG1273|consen 145 PKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLE----CVASFRITSVQAIKQIIVSRKGRFLIINTSDRVI 220 (405)
T ss_pred cCCCccccccccccccccCCCCEEEEecCcceEEEEecchhe----eeeeeeechheeeeEEEEeccCcEEEEecCCceE
Confidence 1100 011122344688999999999999999999998654 355555444 778999999999999999999999
Q ss_pred EEEeccCCCCCCCCCCCCCCCceEEEEEEecc-ccccEEEEEecCCCCeEEEEeC-CCeEEEcccCCCCCCCCceeeEEE
Q psy14815 250 KIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGRTIYDISWCHLTDLIATACG-DDAIRIFKENPEAGDSDMVSFDLV 327 (479)
Q Consensus 250 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~-dg~i~vw~~~~~~~~~~~~~~~~~ 327 (479)
|.|+++.-..... .....+...+..- ....-.+++|+.+|.|++.++. ...++||.-..+. +
T Consensus 221 R~ye~~di~~~~r------~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~Gs----------L 284 (405)
T KOG1273|consen 221 RTYEISDIDDEGR------DGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGS----------L 284 (405)
T ss_pred EEEehhhhcccCc------cCCcChhHHHHHHHhhhhhhheeecCCccEEEeccccceeEEEEecCCcc----------e
Confidence 9999863221100 0000111111100 1234457889999999887764 4689999999998 5
Q ss_pred eccccccc-cceeEEEecCCCCCCC
Q psy14815 328 HTEHRAHN-QDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 328 ~~~~~~h~-~~v~~~~~sp~~~~l~ 351 (479)
..++.|.. .....+.|+|-.+.++
T Consensus 285 VKILhG~kgE~l~DV~whp~rp~i~ 309 (405)
T KOG1273|consen 285 VKILHGTKGEELLDVNWHPVRPIIA 309 (405)
T ss_pred eeeecCCchhheeecccccceeeee
Confidence 55555555 6678899999888773
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-23 Score=198.64 Aligned_cols=284 Identities=15% Similarity=0.248 Sum_probs=221.4
Q ss_pred cccccccccceEEEEEC-CCCCeEEEeeCCCcEEEEecccccccccccC------------C------------------
Q psy14815 4 SQTLKGHQGRVWNVSWN-PQGTMISSCGEDKNIRLWVMVIREPYEKLHG------------L------------------ 52 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s-~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~------------~------------------ 52 (479)
++.-.||+.+-.|+.|. .+|..+.+++.|++.+.+++.....-+++.. .
T Consensus 327 LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~ 406 (910)
T KOG1539|consen 327 LRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENA 406 (910)
T ss_pred eeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccc
Confidence 45556999999999998 6899999999999999998643221111110 0
Q ss_pred ---CccceEEEeecCCcEEEecCCCCCC-ceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeE
Q psy14815 53 ---PVETSLRQLVEDKNIRLWGKESFGN-KFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNA 128 (479)
Q Consensus 53 ---~~~~~~~~~~~~~~i~~w~~~~~~~-~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~ 128 (479)
.-.+.+..-..+...+.|+++.... .+.............+++++.++.|++.+.|...|.|-+|++++|- ...
T Consensus 407 RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi--~r~ 484 (910)
T KOG1539|consen 407 REKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGI--HRK 484 (910)
T ss_pred hhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCe--eec
Confidence 1123333444566788898875322 2222222223355789999999999999999999999999999995 445
Q ss_pred EE---eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEE
Q psy14815 129 TL---EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL 205 (479)
Q Consensus 129 ~~---~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i 205 (479)
.+ +.|.++|+.++...-++.+++++.+|.+++||..... ....+. -...+.++.++.....++.+..|-.|++
T Consensus 485 sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~---l~~~l~-l~~~~~~iv~hr~s~l~a~~~ddf~I~v 560 (910)
T KOG1539|consen 485 SFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKV---LKKSLR-LGSSITGIVYHRVSDLLAIALDDFSIRV 560 (910)
T ss_pred ccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcc---eeeeec-cCCCcceeeeeehhhhhhhhcCceeEEE
Confidence 55 5799999999999888999999999999999998863 333332 2456788889988889999999999999
Q ss_pred EecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccccc
Q psy14815 206 FKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRT 285 (479)
Q Consensus 206 ~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (479)
+|..+.+. ++.+.+|...|++++|||||++|++++.|++|++||+..+ .++-.+.. ..+
T Consensus 561 vD~~t~kv----vR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~---------------~lID~~~v--d~~ 619 (910)
T KOG1539|consen 561 VDVVTRKV----VREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTG---------------TLIDGLLV--DSP 619 (910)
T ss_pred EEchhhhh----hHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCc---------------ceeeeEec--CCc
Confidence 99987654 7889999999999999999999999999999999998444 33444433 678
Q ss_pred EEEEEecCCCCeEEEEeCC-CeEEEcccCC
Q psy14815 286 IYDISWCHLTDLIATACGD-DAIRIFKENP 314 (479)
Q Consensus 286 i~~l~~~~~~~~l~~~~~d-g~i~vw~~~~ 314 (479)
..++.|+|+|.+||+...| .-|++|.-.+
T Consensus 620 ~~sls~SPngD~LAT~Hvd~~gIylWsNks 649 (910)
T KOG1539|consen 620 CTSLSFSPNGDFLATVHVDQNGIYLWSNKS 649 (910)
T ss_pred ceeeEECCCCCEEEEEEecCceEEEEEchh
Confidence 9999999999999999998 6799996544
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-22 Score=186.81 Aligned_cols=275 Identities=16% Similarity=0.298 Sum_probs=214.0
Q ss_pred cccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
-...|++|+|+.+.+.||.+-.||.|.||++..+- ........+.
T Consensus 24 ~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w-----------------------------------~~~~vi~g~~ 68 (691)
T KOG2048|consen 24 KPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNW-----------------------------------FLEPVIHGPE 68 (691)
T ss_pred eccceEEEEEeccCCceeeeccCCcEEEEccCCCc-----------------------------------eeeEEEecCC
Confidence 35789999999999999999999999999986422 2333333466
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCce
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 169 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 169 (479)
.+.|.+++|++ +..|++.+.+|.|.-||+.+++ ....++...+.|++++.+|.+..++.|+.||.+..++...+ .+
T Consensus 69 drsIE~L~W~e-~~RLFS~g~sg~i~EwDl~~lk--~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~-~I 144 (691)
T KOG2048|consen 69 DRSIESLAWAE-GGRLFSSGLSGSITEWDLHTLK--QKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPD-KI 144 (691)
T ss_pred CCceeeEEEcc-CCeEEeecCCceEEEEecccCc--eeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCc-eE
Confidence 78999999994 5578888889999999999997 66778888899999999999999999999997776666654 33
Q ss_pred eeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC----CCccEEEEEEccCCCEEEEeeC
Q psy14815 170 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS----HTSTVWSLAFDRIGSRLATCSD 245 (479)
Q Consensus 170 ~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~s~~~ 245 (479)
.....+....+.+.+++|+|++..+++|+.||.|++||..++.........+.. ...-|+++.|-.+ ..|++|..
T Consensus 145 ~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd-~tI~sgDS 223 (691)
T KOG2048|consen 145 TYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRD-STIASGDS 223 (691)
T ss_pred EEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeec-CcEEEecC
Confidence 444556666788999999999999999999999999999987752211111211 2345788888755 46889999
Q ss_pred CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeE
Q psy14815 246 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFD 325 (479)
Q Consensus 246 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~ 325 (479)
-|+|.+||...+ .++..+..| ...|.+++..+++.++++++.|+.|.-|...+.+.. +.
T Consensus 224 ~G~V~FWd~~~g---------------TLiqS~~~h-~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~-----wv 282 (691)
T KOG2048|consen 224 AGTVTFWDSIFG---------------TLIQSHSCH-DADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSE-----WV 282 (691)
T ss_pred CceEEEEcccCc---------------chhhhhhhh-hcceeEEEEcCCCCeEEEccCCCceEEEEecCCccc-----ee
Confidence 999999997443 445566665 889999999999999999999999999988877521 21
Q ss_pred EEeccccccccceeEEEecCC
Q psy14815 326 LVHTEHRAHNQDVNCVAWNPV 346 (479)
Q Consensus 326 ~~~~~~~~h~~~v~~~~~sp~ 346 (479)
.......|...|.+++..++
T Consensus 283 -~~~~r~~h~hdvrs~av~~~ 302 (691)
T KOG2048|consen 283 -INSRRDLHAHDVRSMAVIEN 302 (691)
T ss_pred -eeccccCCcccceeeeeecc
Confidence 11222467777888777766
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-23 Score=191.98 Aligned_cols=278 Identities=19% Similarity=0.229 Sum_probs=198.1
Q ss_pred EEECC---CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcE
Q psy14815 17 VSWNP---QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 93 (479)
Q Consensus 17 l~~s~---~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v 93 (479)
..|++ ....|+.+.+||.|.++|........ ..........|...|
T Consensus 55 ~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~-------------------------------ee~~lk~~~aH~nAi 103 (720)
T KOG0321|consen 55 DSFSAAPNKEHILAVADEDGGIILFDTKSIVFRL-------------------------------EERQLKKPLAHKNAI 103 (720)
T ss_pred ccccCCCCccceEEEecCCCceeeecchhhhcch-------------------------------hhhhhccccccccee
Confidence 55654 33467778888888888765322110 001111235799999
Q ss_pred EEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEEeCCCCc----
Q psy14815 94 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDE---- 168 (479)
Q Consensus 94 ~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vwd~~~~~~---- 168 (479)
..+.|-|....|++++.|.++++||+++++..-...+.+|...|.+++|.+ +...|++|+.||.|.+||++....
T Consensus 104 fDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e 183 (720)
T KOG0321|consen 104 FDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALE 183 (720)
T ss_pred EeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHH
Confidence 999999977899999999999999999998665566889999999999999 566899999999999999975420
Q ss_pred ----------------e----eeeeeeeccccceeE---EEEecCCCEEEEEEc-CCcEEEEecCCcccce----Eeeee
Q psy14815 169 ----------------Y----ECAAVINAHIQDVKK---VRFHPFDNILASASY-DDTVKLFKEDKAEADW----INFAT 220 (479)
Q Consensus 169 ----------------~----~~~~~~~~~~~~v~~---l~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~----~~~~~ 220 (479)
. +.......+...|.+ +.+..|...|++++. |+.|++||+++....+ .....
T Consensus 184 ~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~ 263 (720)
T KOG0321|consen 184 EFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDK 263 (720)
T ss_pred HHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccC
Confidence 0 001112233444555 556678889999887 9999999999754321 11222
Q ss_pred ecCC---CccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccE-EEEEecCCCC
Q psy14815 221 LKSH---TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTI-YDISWCHLTD 296 (479)
Q Consensus 221 ~~~~---~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~l~~~~~~~ 296 (479)
+..| ...+.++..+..|.+|++.+.|+.|++|++...... ++..+.++....+ ..-..+|++.
T Consensus 264 ~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~s-------------P~~~~sg~~~~sf~vks~lSpd~~ 330 (720)
T KOG0321|consen 264 YPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSIS-------------PVAEFSGKLNSSFYVKSELSPDDC 330 (720)
T ss_pred ccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcC-------------chhhccCcccceeeeeeecCCCCc
Confidence 2333 446788888888999988888999999998655432 2233333311111 1224689999
Q ss_pred eEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCC
Q psy14815 297 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347 (479)
Q Consensus 297 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~ 347 (479)
++++|+.|...++|.+...+ .....+.+|...|++++|.|..
T Consensus 331 ~l~SgSsd~~ayiw~vs~~e---------~~~~~l~Ght~eVt~V~w~pS~ 372 (720)
T KOG0321|consen 331 SLLSGSSDEQAYIWVVSSPE---------APPALLLGHTREVTTVRWLPSA 372 (720)
T ss_pred eEeccCCCcceeeeeecCcc---------CChhhhhCcceEEEEEeecccc
Confidence 99999999999999999887 3344567999999999998853
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.9e-22 Score=181.83 Aligned_cols=278 Identities=11% Similarity=0.050 Sum_probs=190.6
Q ss_pred CCeEEEeeCCCcEEEEecccccccccccCC---------CccceE-EEeecCCcEEEecCCCCCCceeeeEEeccccCCc
Q psy14815 23 GTMISSCGEDKNIRLWVMVIREPYEKLHGL---------PVETSL-RQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRT 92 (479)
Q Consensus 23 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~---------~~~~~~-~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 92 (479)
+..+++++.|+.+++||+.+++.+..+... +++..+ ++...++.+.+||...... . ... ..+ ..
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~--~--~~~-~~~-~~ 74 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATLEVTRTFPVGQRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEV--I--GTL-PSG-PD 74 (300)
T ss_pred CcEEEEecCCCEEEEEECCCCceEEEEECCCCCCceEECCCCCEEEEEECCCCeEEEEECCCCcE--E--Eec-cCC-CC
Confidence 357889999999999999888776665432 334444 3455678999999874221 1 111 122 33
Q ss_pred EEEEEECCCCCEEEEE-ECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC-cEEEEEeCCCCcee
Q psy14815 93 IRETAWSPCGNFIASA-SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK-SVWVWEVGEEDEYE 170 (479)
Q Consensus 93 v~~v~~~~~~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg-~i~vwd~~~~~~~~ 170 (479)
+..++|+|+++.++++ +.++.+++||+.+++ .+..+.. ...+.+++|+|+++.+++++.++ .+.+||.++.+
T Consensus 75 ~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~--~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~--- 148 (300)
T TIGR03866 75 PELFALHPNGKILYIANEDDNLVTVIDIETRK--VLAEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYE--- 148 (300)
T ss_pred ccEEEECCCCCEEEEEcCCCCeEEEEECCCCe--EEeEeeC-CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCe---
Confidence 5678999999877655 568999999999875 3444442 23468899999999999988875 46778987753
Q ss_pred eeeeeeccccceeEEEEecCCCEEEEE-EcCCcEEEEecCCcccceEeeeeecCC-------CccEEEEEEccCCCEEEE
Q psy14815 171 CAAVINAHIQDVKKVRFHPFDNILASA-SYDDTVKLFKEDKAEADWINFATLKSH-------TSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 171 ~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~s 242 (479)
...... ......+++|+|++++|+++ ..++.|++||+++++. ...+..+ ......++|+|++++++.
T Consensus 149 ~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~ 223 (300)
T TIGR03866 149 IVDNVL-VDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKV----IKKITFEIPGVHPEAVQPVGIKLTKDGKTAFV 223 (300)
T ss_pred EEEEEE-cCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCccee----eeeeeecccccccccCCccceEECCCCCEEEE
Confidence 222222 22345789999999988655 4689999999987653 2222111 112356889999998654
Q ss_pred -eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEE-eCCCeEEEcccCCCCCCCC
Q psy14815 243 -CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA-CGDDAIRIFKENPEAGDSD 320 (479)
Q Consensus 243 -~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~-~~dg~i~vw~~~~~~~~~~ 320 (479)
.+.++.+.+||.... +....+.. ...+.+++|+|++++|+++ +.+|.|++||+.+++
T Consensus 224 ~~~~~~~i~v~d~~~~---------------~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~---- 282 (300)
T TIGR03866 224 ALGPANRVAVVDAKTY---------------EVLDYLLV--GQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALK---- 282 (300)
T ss_pred EcCCCCeEEEEECCCC---------------cEEEEEEe--CCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCc----
Confidence 455678999997432 22333322 3478899999999999886 458999999999987
Q ss_pred ceeeEEEeccccccccceeEEEecC
Q psy14815 321 MVSFDLVHTEHRAHNQDVNCVAWNP 345 (479)
Q Consensus 321 ~~~~~~~~~~~~~h~~~v~~~~~sp 345 (479)
++..+. . ....+.++++|
T Consensus 283 -----~~~~~~-~-~~~~~~~~~~~ 300 (300)
T TIGR03866 283 -----VIKSIK-V-GRLPWGVVVRP 300 (300)
T ss_pred -----EEEEEE-c-ccccceeEeCC
Confidence 444442 2 34558888876
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.7e-24 Score=183.39 Aligned_cols=215 Identities=25% Similarity=0.332 Sum_probs=173.8
Q ss_pred cccCCcEEEEEECCC--CCEEEEEECCCeEEEEECCC--------------CeEEEeEEEeCCCCcEEEEEEcCC-CCEE
Q psy14815 87 DGHQRTIRETAWSPC--GNFIASASFDATTAVWDKRS--------------GQFECNATLEGHENEVKSVTWSKN-GQFL 149 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~--~~~l~t~~~dg~i~iwd~~~--------------~~~~~~~~~~~~~~~v~~l~~~~~-~~~l 149 (479)
.+|.+.++.+..++- ..+.++=+..|.|.||++.. .+..++.++.+|...=+.++|||- -..|
T Consensus 148 i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~L 227 (440)
T KOG0302|consen 148 IPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRL 227 (440)
T ss_pred cccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeeccccccccc
Confidence 467777777777764 45666667889999999752 223577889999999999999992 2348
Q ss_pred EEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccE
Q psy14815 150 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTV 228 (479)
Q Consensus 150 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v 228 (479)
++|..-+.|++|...++.=..-...+.+|...|..++|||. ...|++|+.||+|+|||+|.+... .....+.|.+.|
T Consensus 228 lsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~--~~~~~kAh~sDV 305 (440)
T KOG0302|consen 228 LSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKK--AAVSTKAHNSDV 305 (440)
T ss_pred ccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCcc--ceeEeeccCCce
Confidence 88888899999999885322223456789999999999994 578999999999999999987542 223348899999
Q ss_pred EEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCC-CCeEEEEeCCCeE
Q psy14815 229 WSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL-TDLIATACGDDAI 307 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~-~~~l~~~~~dg~i 307 (479)
+.+.|+....+|++|+.||+++|||++.-+. ..++.+++.| ..+|+++.|+|. ...|++++.|..|
T Consensus 306 NVISWnr~~~lLasG~DdGt~~iwDLR~~~~------------~~pVA~fk~H-k~pItsieW~p~e~s~iaasg~D~Qi 372 (440)
T KOG0302|consen 306 NVISWNRREPLLASGGDDGTLSIWDLRQFKS------------GQPVATFKYH-KAPITSIEWHPHEDSVIAASGEDNQI 372 (440)
T ss_pred eeEEccCCcceeeecCCCceEEEEEhhhccC------------CCcceeEEec-cCCeeEEEeccccCceEEeccCCCcE
Confidence 9999999888999999999999999976543 2568888887 889999999985 4578888999999
Q ss_pred EEcccCCCC
Q psy14815 308 RIFKENPEA 316 (479)
Q Consensus 308 ~vw~~~~~~ 316 (479)
.+||+....
T Consensus 373 tiWDlsvE~ 381 (440)
T KOG0302|consen 373 TIWDLSVEA 381 (440)
T ss_pred EEEEeeccC
Confidence 999998765
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.4e-23 Score=172.90 Aligned_cols=236 Identities=22% Similarity=0.313 Sum_probs=183.0
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEE
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAI 84 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~ 84 (479)
+....|.++|.+++|+.||..+++|+.|+.+++||+.+++....
T Consensus 66 ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q~~~v------------------------------------ 109 (347)
T KOG0647|consen 66 KAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQVSQV------------------------------------ 109 (347)
T ss_pred hhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCCeeee------------------------------------
Confidence 44567999999999999999999999999999999998864322
Q ss_pred eccccCCcEEEEEECCCC--CEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy14815 85 LSDGHQRTIRETAWSPCG--NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~~--~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd 162 (479)
..|..+|.++.|-+.. ..|+||+.|.+|+.||.++.+ ++.++. -.+.++++..- ..+++++..++.|.+|+
T Consensus 110 --~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~--pv~t~~-LPeRvYa~Dv~--~pm~vVata~r~i~vyn 182 (347)
T KOG0647|consen 110 --AAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSN--PVATLQ-LPERVYAADVL--YPMAVVATAERHIAVYN 182 (347)
T ss_pred --eecccceeEEEEecCCCcceeEecccccceeecccCCCC--eeeeee-ccceeeehhcc--CceeEEEecCCcEEEEE
Confidence 4699999999998755 489999999999999999886 444444 34577877664 45788999999999999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCC---------ccEEEEEE
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT---------STVWSLAF 233 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~---------~~v~~~~~ 233 (479)
++.+.. +.......-+-.++|++..++....+.|+-+|.+-+..+..+.. ..-.+++.|. ..|++++|
T Consensus 183 L~n~~t-e~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~--~~nFtFkCHR~~~~~~~~VYaVNsi~F 259 (347)
T KOG0647|consen 183 LENPPT-EFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNP--KDNFTFKCHRSTNSVNDDVYAVNSIAF 259 (347)
T ss_pred cCCCcc-hhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCc--cCceeEEEeccCCCCCCceEEecceEe
Confidence 977532 11111222344689999999888889999999999999887532 1223344443 35889999
Q ss_pred ccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe
Q psy14815 234 DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 234 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~ 302 (479)
+|....|++++.||+..+||-....+ +.+...+ ..+|++.+|+.+|.+++-+.
T Consensus 260 hP~hgtlvTaGsDGtf~FWDkdar~k---------------Lk~s~~~-~qpItcc~fn~~G~ifaYA~ 312 (347)
T KOG0647|consen 260 HPVHGTLVTAGSDGTFSFWDKDARTK---------------LKTSETH-PQPITCCSFNRNGSIFAYAL 312 (347)
T ss_pred ecccceEEEecCCceEEEecchhhhh---------------hhccCcC-CCccceeEecCCCCEEEEEe
Confidence 99999999999999999999644332 2333443 78999999999999888764
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.9e-22 Score=168.94 Aligned_cols=255 Identities=27% Similarity=0.483 Sum_probs=197.4
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECC--CCeEEEeEEEeCCCCcEEEEEEcC--CCCEEEEEeCCCcEEEEE
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKR--SGQFECNATLEGHENEVKSVTWSK--NGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~~~~~dg~i~vwd 162 (479)
.+|.+-|.++.|.+.|+.+|+|+.|++++|||.+ ++++.+....+.|.+.|..+.|.+ -|+.+++++.|+++.||.
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE 89 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE 89 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence 5788999999999999999999999999999964 466778888899999999999976 688999999999999998
Q ss_pred eCC------CCceeeeeeeeccccceeEEEEec--CCCEEEEEEcCCcEEEEecCCccc--ceEeeeeec-------CCC
Q psy14815 163 VGE------EDEYECAAVINAHIQDVKKVRFHP--FDNILASASYDDTVKLFKEDKAEA--DWINFATLK-------SHT 225 (479)
Q Consensus 163 ~~~------~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~-------~~~ 225 (479)
-.. +..+.....+....+.|+.++|.| -|-.|++++.||.+|||+.-.... .|.....++ .+.
T Consensus 90 E~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~ 169 (361)
T KOG2445|consen 90 EQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNK 169 (361)
T ss_pred ecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCccccc
Confidence 632 124555667778888999999999 578899999999999998764321 222233333 466
Q ss_pred ccEEEEEEccC---CCEEEEeeCC-----CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCC---
Q psy14815 226 STVWSLAFDRI---GSRLATCSDD-----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL--- 294 (479)
Q Consensus 226 ~~v~~~~~~~~---~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~--- 294 (479)
.+..|+.|+|. ..+|+.|+.+ +.++||...... ..|..+.++.+| ..+|++++|.|+
T Consensus 170 ~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~-----------rKw~kva~L~d~-~dpI~di~wAPn~Gr 237 (361)
T KOG2445|consen 170 QPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENG-----------RKWLKVAELPDH-TDPIRDISWAPNIGR 237 (361)
T ss_pred CcceEEeeccccccCceEEEEcccCCccccceEEEEecCCc-----------ceeeeehhcCCC-CCcceeeeeccccCC
Confidence 67789999974 3578888765 479999875443 345566777776 899999999996
Q ss_pred -CCeEEEEeCCCeEEEcccCCCC---------CCCCceeeEE-EeccccccccceeEEEecCCCCCCCccc
Q psy14815 295 -TDLIATACGDDAIRIFKENPEA---------GDSDMVSFDL-VHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 295 -~~~l~~~~~dg~i~vw~~~~~~---------~~~~~~~~~~-~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
..+||+++.|| |+||++.... .......+++ ....+..|.+.|..+.|+-.|..|++.+
T Consensus 238 ~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStG 307 (361)
T KOG2445|consen 238 SYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTG 307 (361)
T ss_pred ceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecC
Confidence 34799999999 9999998421 0111112222 2234578999999999999999997765
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.9e-23 Score=172.59 Aligned_cols=234 Identities=21% Similarity=0.259 Sum_probs=182.7
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
.|..++.+++|.+ ...+++|+.||.|+.+|+.++.... ...
T Consensus 52 ~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~~~--------------------------------------igt 92 (323)
T KOG1036|consen 52 KHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNEDQ--------------------------------------IGT 92 (323)
T ss_pred ecCCceeeeeccC-CceEEEeccCceEEEEEecCCccee--------------------------------------ecc
Confidence 5899999999987 5579999999999999998766432 246
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 168 (479)
|..+|.|+.+++-...+++|+.|++|++||.+... ....+. ....|.++..+ ++.|++|+.+..+.+||++....
T Consensus 93 h~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~--~~~~~d-~~kkVy~~~v~--g~~LvVg~~~r~v~iyDLRn~~~ 167 (323)
T KOG1036|consen 93 HDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKV--VVGTFD-QGKKVYCMDVS--GNRLVVGTSDRKVLIYDLRNLDE 167 (323)
T ss_pred CCCceEEEEeeccCCeEEEcccCccEEEEeccccc--cccccc-cCceEEEEecc--CCEEEEeecCceEEEEEcccccc
Confidence 99999999999988899999999999999998743 333443 34588888775 67899999999999999998754
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCC---------ccEEEEEEccCCCE
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT---------STVWSLAFDRIGSR 239 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~ 239 (479)
.. ...-..-+-.++|+++.|++.=.++++-||.|.+=.++...........++.|. .+|++++|+|-.+.
T Consensus 168 ~~-q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~t 246 (323)
T KOG1036|consen 168 PF-QRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGT 246 (323)
T ss_pred hh-hhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccce
Confidence 32 122233455789999999888899999999998876665422222233444443 37999999999999
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeC
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 303 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~ 303 (479)
|+||+.||.|.+||+...+. +..+..- ...|.+++|+.+|..||+++.
T Consensus 247 faTgGsDG~V~~Wd~~~rKr---------------l~q~~~~-~~SI~slsfs~dG~~LAia~s 294 (323)
T KOG1036|consen 247 FATGGSDGIVNIWDLFNRKR---------------LKQLAKY-ETSISSLSFSMDGSLLAIASS 294 (323)
T ss_pred EEecCCCceEEEccCcchhh---------------hhhccCC-CCceEEEEeccCCCeEEEEec
Confidence 99999999999999865543 3333332 557999999999999999975
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.1e-22 Score=183.21 Aligned_cols=299 Identities=20% Similarity=0.249 Sum_probs=218.3
Q ss_pred cccccc-ccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC----------CCccceEEEeecCCcEEEecCC
Q psy14815 5 QTLKGH-QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG----------LPVETSLRQLVEDKNIRLWGKE 73 (479)
Q Consensus 5 ~~l~~h-~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~w~~~ 73 (479)
..+.|+ ...|.+++|+ ++..|++.+-+|.|.-||+.++++...+.. ++.+..+..+++||.+...+..
T Consensus 62 ~vi~g~~drsIE~L~W~-e~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~ 140 (691)
T KOG2048|consen 62 PVIHGPEDRSIESLAWA-EGGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIG 140 (691)
T ss_pred EEEecCCCCceeeEEEc-cCCeEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecC
Confidence 445554 4679999999 466788888999999999988887665543 4666777777788865555554
Q ss_pred CCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEE-----EeC-CCCcEEEEEEcCCCC
Q psy14815 74 SFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNAT-----LEG-HENEVKSVTWSKNGQ 147 (479)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~-----~~~-~~~~v~~l~~~~~~~ 147 (479)
.........+ ....+.|.+++|+|++..+++|+.||.|++||..+++...+.+ +.. ..--|+++.|..++
T Consensus 141 --p~~I~~~r~l-~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~- 216 (691)
T KOG2048|consen 141 --PDKITYKRSL-MRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS- 216 (691)
T ss_pred --CceEEEEeec-ccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecC-
Confidence 4444444333 4557899999999999999999999999999999987433222 111 22347788887654
Q ss_pred EEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCcc
Q psy14815 148 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST 227 (479)
Q Consensus 148 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 227 (479)
.|++|...|+|.+||-..+ ..++....|...|.+++..++++.+++++.|+.|..|...+.+.+|........|...
T Consensus 217 tI~sgDS~G~V~FWd~~~g---TLiqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hd 293 (691)
T KOG2048|consen 217 TIASGDSAGTVTFWDSIFG---TLIQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHD 293 (691)
T ss_pred cEEEecCCceEEEEcccCc---chhhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCccceeeeccccCCccc
Confidence 6999999999999999988 6667788899999999999999999999999999999988877667777778889999
Q ss_pred EEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCC-----CCCC-----------------CC-------------CCce
Q psy14815 228 VWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAG-----IPTP-----------------DN-------------DSVW 272 (479)
Q Consensus 228 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-----~~~~-----------------~~-------------~~~~ 272 (479)
|.+++..++ .+++|+.|..+.+-..+....... .+.. +. ....
T Consensus 294 vrs~av~~~--~l~sgG~d~~l~i~~s~~~~~~~h~~~~~~p~~~~v~~a~~~~L~~~w~~h~v~lwrlGS~~~~g~~~~ 371 (691)
T KOG2048|consen 294 VRSMAVIEN--ALISGGRDFTLAICSSREFKNMDHRQKNLFPASDRVSVAPENRLLVLWKAHGVDLWRLGSVILQGEYNY 371 (691)
T ss_pred ceeeeeecc--eEEecceeeEEEEccccccCchhhhccccccccceeecCccceEEEEeccccccceeccCcccccccCh
Confidence 999999866 889999999888876544211110 0000 00 0011
Q ss_pred EEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCC
Q psy14815 273 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 314 (479)
Q Consensus 273 ~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~ 314 (479)
..+..+.......|.+.+.+|+|++|+.+.- ..+++|.++.
T Consensus 372 ~~Llkl~~k~~~nIs~~aiSPdg~~Ia~st~-~~~~iy~L~~ 412 (691)
T KOG2048|consen 372 IHLLKLFTKEKENISCAAISPDGNLIAISTV-SRTKIYRLQP 412 (691)
T ss_pred hhheeeecCCccceeeeccCCCCCEEEEeec-cceEEEEecc
Confidence 1122222223557899999999999988763 2445555544
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-23 Score=183.93 Aligned_cols=264 Identities=19% Similarity=0.255 Sum_probs=192.2
Q ss_pred EEEEECC-------CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecc
Q psy14815 15 WNVSWNP-------QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSD 87 (479)
Q Consensus 15 ~~l~~s~-------~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~ 87 (479)
.|++|.. .|+++|.|+.|..|.|||+.-...+.... ..++..++ .......+.....
T Consensus 177 LC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~--------~LGs~~sk--------~~~k~~k~~~~~~ 240 (463)
T KOG0270|consen 177 LCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCV--------TLGSKASK--------KKKKKGKRSNSAS 240 (463)
T ss_pred hhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccce--------eechhhhh--------hhhhhcccccccc
Confidence 5666643 36799999999999999986433221110 00000000 0001111223346
Q ss_pred ccCCcEEEEEECCC-CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEEeCC
Q psy14815 88 GHQRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 88 ~~~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vwd~~~ 165 (479)
+|+..|.+++|+.. .+.||+|+.|.+|++||+.+++ +...+..|.+.|.++.|+| .+..|++|+.|++|.+.|.|.
T Consensus 241 gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~--p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~ 318 (463)
T KOG0270|consen 241 GHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGK--PKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRD 318 (463)
T ss_pred cchHHHHHHHhccccceeEEecCCCceEEEEEcCCCC--cceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccC
Confidence 89999999999874 5789999999999999999997 6778888999999999999 678999999999999999996
Q ss_pred CCceeeeeeeeccccceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC-CEEEEe
Q psy14815 166 EDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SRLATC 243 (479)
Q Consensus 166 ~~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~ 243 (479)
........ ...+.|-.++|.|. ...+++++.||+|+-+|+|+.. .++.++++|..+|.++++++.. .+++++
T Consensus 319 ~~~s~~~w---k~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~---~~vwt~~AHd~~ISgl~~n~~~p~~l~t~ 392 (463)
T KOG0270|consen 319 PSNSGKEW---KFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPG---KPVWTLKAHDDEISGLSVNIQTPGLLSTA 392 (463)
T ss_pred ccccCceE---EeccceEEEEecCCCceeEEEecCCceEEeeecCCCC---CceeEEEeccCCcceEEecCCCCcceeec
Confidence 43222222 23567889999995 4678888899999999999875 4689999999999999998754 567899
Q ss_pred eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC-eEEEEeCCCeEEEcccCCCC
Q psy14815 244 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 244 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~~dg~i~vw~~~~~~ 316 (479)
+.|+.|++|++....... ...+.+. -+...|.++.|+-. +++.|+..+.++|||+.+..
T Consensus 393 s~d~~Vklw~~~~~~~~~-----------v~~~~~~---~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~ 452 (463)
T KOG0270|consen 393 STDKVVKLWKFDVDSPKS-----------VKEHSFK---LGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNS 452 (463)
T ss_pred cccceEEEEeecCCCCcc-----------ccccccc---ccceeecccCCCcceEEEecCccceEEEeecccCh
Confidence 999999999985433211 0111221 12366777777654 57778888899999998865
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.5e-23 Score=193.55 Aligned_cols=250 Identities=20% Similarity=0.317 Sum_probs=205.7
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
+-...|.+++.+|+|++||+|..-|+++||++..-+....+ ..
T Consensus 457 d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~-------------------------------------eA 499 (1080)
T KOG1408|consen 457 DSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFM-------------------------------------EA 499 (1080)
T ss_pred CcccceEEEEECCCcceecccCccCceEEEEehhhhhhhhe-------------------------------------ec
Confidence 45678999999999999999999999999998766655444 67
Q ss_pred cCCcEEEEEECC---CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCC--CEEEEEeCCCcEEEEEe
Q psy14815 89 HQRTIRETAWSP---CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG--QFLATCSRDKSVWVWEV 163 (479)
Q Consensus 89 ~~~~v~~v~~~~---~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~--~~l~~~~~dg~i~vwd~ 163 (479)
|...|.|+.|+. ..++||+++.|.-|.|+|+... +..+.++.+|...|+++.|-..| ..+++++.|..|.+ +.
T Consensus 500 HesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rn-y~l~qtld~HSssITsvKFa~~gln~~MiscGADksimF-r~ 577 (1080)
T KOG1408|consen 500 HESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRN-YDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMF-RV 577 (1080)
T ss_pred ccceeEEEeecCchhhhHhhhhccCCceEEEEecccc-cchhhhhcccccceeEEEEeecCCceEEEeccCchhhhe-eh
Confidence 999999999986 3578999999999999998754 46778999999999999998877 68999999988754 43
Q ss_pred CCCC-c--eeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEE
Q psy14815 164 GEED-E--YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 164 ~~~~-~--~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 240 (479)
.... . ......-......+..++..|..+++++++.|..|+|||+.+++. .+.++.-+.|.+....+...|.|.|+
T Consensus 578 ~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq-~k~FKgs~~~eG~lIKv~lDPSgiY~ 656 (1080)
T KOG1408|consen 578 NQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQ-VKSFKGSRDHEGDLIKVILDPSGIYL 656 (1080)
T ss_pred hccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccce-eeeecccccCCCceEEEEECCCccEE
Confidence 3211 0 011111112234688999999999999999999999999998875 22333445677888899999999999
Q ss_pred EEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCC
Q psy14815 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 314 (479)
Q Consensus 241 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~ 314 (479)
++...|.++.++|. ..++|+.+..|| ...|+.+.|.+|-+.|++.+.||.|.||.+..
T Consensus 657 atScsdktl~~~Df---------------~sgEcvA~m~GH-sE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 657 ATSCSDKTLCFVDF---------------VSGECVAQMTGH-SEAVTGVKFLNDCKHLISVSGDGCIFVWKLPL 714 (1080)
T ss_pred EEeecCCceEEEEe---------------ccchhhhhhcCc-chheeeeeecccchhheeecCCceEEEEECch
Confidence 99999999999998 445788999998 88999999999999999999999999998764
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.7e-23 Score=184.83 Aligned_cols=280 Identities=14% Similarity=0.191 Sum_probs=207.7
Q ss_pred cEEEEecccccccccccCC------------Ccc-ceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECC
Q psy14815 34 NIRLWVMVIREPYEKLHGL------------PVE-TSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 100 (479)
Q Consensus 34 ~v~iwd~~~~~~~~~~~~~------------~~~-~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~ 100 (479)
.++|||+...+....+..+ ... -.++..+.|..+++|..... ..... .........-.|++...
T Consensus 13 ~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~--~~~Vp-~~~k~~gd~~~Cv~~~s 89 (673)
T KOG4378|consen 13 KTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGK--TPEVP-RVRKLTGDNAFCVACAS 89 (673)
T ss_pred ceEEeecccccCccccccCCCCCcceeeeccccceEEEeecCCceeEEEecccCC--CCccc-eeeccccchHHHHhhhh
Confidence 6999998765544443322 111 12334456778888877632 11111 11122233555666666
Q ss_pred CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeecc-c
Q psy14815 101 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAH-I 179 (479)
Q Consensus 101 ~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-~ 179 (479)
...++++|+..+.|+|||++.. .+.+.+++|...|+++.++-...+|++++..|.|.+..+.++. ....+... .
T Consensus 90 ~S~y~~sgG~~~~Vkiwdl~~k--l~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~---~tt~f~~~sg 164 (673)
T KOG4378|consen 90 QSLYEISGGQSGCVKIWDLRAK--LIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQ---KTTTFTIDSG 164 (673)
T ss_pred cceeeeccCcCceeeehhhHHH--HHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCc---cccceecCCC
Confidence 6689999999999999999955 3678889999999999999999999999999999999998873 33334332 4
Q ss_pred cceeEEEEecCCC-EEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC-CEEEEeeCCCeEEEEeccCC
Q psy14815 180 QDVKKVRFHPFDN-ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SRLATCSDDATVKIWKEYKP 257 (479)
Q Consensus 180 ~~v~~l~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~ 257 (479)
..|+-+.|+|..+ +|.+++.+|.|.+||.....+ .......|..+...++|+|.. ..|++.+.|..|.+||.+..
T Consensus 165 qsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp---~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~ 241 (673)
T KOG4378|consen 165 QSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSP---IFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQ 241 (673)
T ss_pred CeEEEeecccccceeeEeeccCCeEEEEeccCCCc---ccchhhhccCCcCcceecCCccceEEEecccceEEEeecccc
Confidence 5677899999665 566789999999999987654 344567799999999999965 46788999999999998643
Q ss_pred CCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccc
Q psy14815 258 GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQD 337 (479)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~ 337 (479)
.. ...+.. ..|...++|+++|.+|+.|+..|.|..||++..+. ...+...|...
T Consensus 242 ~s---------------~~~l~y--~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~---------Pv~v~sah~~s 295 (673)
T KOG4378|consen 242 AS---------------TDRLTY--SHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKA---------PVAVRSAHDAS 295 (673)
T ss_pred cc---------------cceeee--cCCcceeeecCCceEEEeecCCceEEEEecccCCC---------CceEeeecccc
Confidence 22 122222 45899999999999999999999999999998872 33444688999
Q ss_pred eeEEEecCCCCCC
Q psy14815 338 VNCVAWNPVVPEP 350 (479)
Q Consensus 338 v~~~~~sp~~~~l 350 (479)
|++++|-|....|
T Consensus 296 Vt~vafq~s~tvl 308 (673)
T KOG4378|consen 296 VTRVAFQPSPTVL 308 (673)
T ss_pred eeEEEeeecceee
Confidence 9999998875333
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.8e-23 Score=189.54 Aligned_cols=247 Identities=22% Similarity=0.343 Sum_probs=200.7
Q ss_pred ceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEE-EEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCC
Q psy14815 56 TSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE-TAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGH 133 (479)
Q Consensus 56 ~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~-v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~ 133 (479)
..+++++.|+++++|+-. +..+... ....+|.+-|.+ +++-+ ++-.+++|+.|.+|.+|...+.. +...+.+|
T Consensus 26 ~~i~s~sRd~t~~vw~~~--~~~~l~~-~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~--P~~~LkgH 100 (745)
T KOG0301|consen 26 VCIISGSRDGTVKVWAKK--GKQYLET-HAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAE--PLYTLKGH 100 (745)
T ss_pred eEEeecCCCCceeeeecc--Ccccccc-eecccCcceeeccceeccccCcceEeecccceEEEEecCCCC--chhhhhcc
Confidence 356778889999999876 3333322 223566777776 88876 55579999999999999998875 78999999
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCccc
Q psy14815 134 ENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA 213 (479)
Q Consensus 134 ~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 213 (479)
+..|.|++...++. +++||.|.++++|-... +...+.+|...|.++..-|++ .+++|+.|.+|++|.-.
T Consensus 101 ~snVC~ls~~~~~~-~iSgSWD~TakvW~~~~-----l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~~---- 169 (745)
T KOG0301|consen 101 KSNVCSLSIGEDGT-LISGSWDSTAKVWRIGE-----LVYSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKGG---- 169 (745)
T ss_pred ccceeeeecCCcCc-eEecccccceEEecchh-----hhcccCCcchheeeeeecCCC-cEEeccCcceeeeccCC----
Confidence 99999999887777 99999999999999864 345589999999999999977 89999999999999874
Q ss_pred ceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC
Q psy14815 214 DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 293 (479)
Q Consensus 214 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~ 293 (479)
..++++.+|...|..+++-+++ .|++|+.||.|++|++ .+.++..+.+| ..-|++++..+
T Consensus 170 --~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~----------------~ge~l~~~~gh-tn~vYsis~~~ 229 (745)
T KOG0301|consen 170 --TLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL----------------DGEVLLEMHGH-TNFVYSISMAL 229 (745)
T ss_pred --chhhhhccchhheeeeEEecCC-CeEeecCCceEEEEec----------------cCceeeeeecc-ceEEEEEEecC
Confidence 3478899999999999998764 5779999999999996 33668888887 88999999888
Q ss_pred CCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 294 LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 294 ~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
++..++++++|+++++|+... +.+.+ .-....|+++.+-++|..+
T Consensus 230 ~~~~Ivs~gEDrtlriW~~~e-----------~~q~I-~lPttsiWsa~~L~NgDIv 274 (745)
T KOG0301|consen 230 SDGLIVSTGEDRTLRIWKKDE-----------CVQVI-TLPTTSIWSAKVLLNGDIV 274 (745)
T ss_pred CCCeEEEecCCceEEEeecCc-----------eEEEE-ecCccceEEEEEeeCCCEE
Confidence 889999999999999998773 23322 2223477888777777655
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-22 Score=172.45 Aligned_cols=299 Identities=17% Similarity=0.275 Sum_probs=214.4
Q ss_pred cccccccceEEEEECC-----CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 6 TLKGHQGRVWNVSWNP-----QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 6 ~l~~h~~~V~~l~~s~-----~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
...+|+.+|..++|++ +...++|++.+ ++.+|+......+..+
T Consensus 33 l~ed~~~~I~gv~fN~~~~~~e~~vfatvG~~-rvtiy~c~~d~~ir~l------------------------------- 80 (385)
T KOG1034|consen 33 LKEDHNKPIFGVAFNSFLGCDEPQVFATVGGN-RVTIYECPGDGGIRLL------------------------------- 80 (385)
T ss_pred hhccCCCccceeeeehhcCCCCCceEEEeCCc-EEEEEEECCccceeee-------------------------------
Confidence 3457889999999985 34567777754 6888876432221111
Q ss_pred eeEEeccccCCcEEEEEECCC----CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCC
Q psy14815 81 AKAILSDGHQRTIRETAWSPC----GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRD 155 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~----~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~d 155 (479)
+......|......++|+-+ ..++|.|+.-|.|+|.|+.+++ ....+.+|...|+.+.+.| +.++++++|.|
T Consensus 81 -q~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~--~~~~~~ghG~sINeik~~p~~~qlvls~SkD 157 (385)
T KOG1034|consen 81 -QSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQ--CSKNYRGHGGSINEIKFHPDRPQLVLSASKD 157 (385)
T ss_pred -eeccCCCCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhh--hccceeccCccchhhhcCCCCCcEEEEecCC
Confidence 11111346777888888753 4689999999999999999987 6788899999999999999 55799999999
Q ss_pred CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccc---------------------
Q psy14815 156 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEAD--------------------- 214 (479)
Q Consensus 156 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--------------------- 214 (479)
..|++|++++........-..+|...|.++.|++++.+|++++.|..+++|++...+..
T Consensus 158 ~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~ 237 (385)
T KOG1034|consen 158 HSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTP 237 (385)
T ss_pred ceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCcc
Confidence 99999999998555555556789999999999999999999999999999999832210
Q ss_pred ---eEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCC-CCCCCCCCCCceEEEEEEeccccccEEEEE
Q psy14815 215 ---WINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNS-AGIPTPDNDSVWKCVCTLSGHHGRTIYDIS 290 (479)
Q Consensus 215 ---~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 290 (479)
+....+...|...|-|+.|- |+++++-|-++.|..|...+..+. ..+.. ++..-..+..+.-. ...|+-+.
T Consensus 238 ~~~fp~fst~diHrnyVDCvrw~--gd~ilSkscenaI~~w~pgkl~e~~~~vkp--~es~~Ti~~~~~~~-~c~iWfir 312 (385)
T KOG1034|consen 238 KTHFPDFSTTDIHRNYVDCVRWF--GDFILSKSCENAIVCWKPGKLEESIHNVKP--PESATTILGEFDYP-MCDIWFIR 312 (385)
T ss_pred ccccccccccccccchHHHHHHH--hhheeecccCceEEEEecchhhhhhhccCC--CccceeeeeEeccC-ccceEEEE
Confidence 00011234477777777776 689999999999999987332222 11111 11222344555553 55666665
Q ss_pred ec--CCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 291 WC--HLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 291 ~~--~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
|. |-++.||.|...|.|.+||++..++.. +...........|...+||.|+..|
T Consensus 313 f~~d~~~~~la~gnq~g~v~vwdL~~~ep~~------~ttl~~s~~~~tVRQ~sfS~dgs~l 368 (385)
T KOG1034|consen 313 FAFDPWQKMLALGNQSGKVYVWDLDNNEPPK------CTTLTHSKSGSTVRQTSFSRDGSIL 368 (385)
T ss_pred EeecHHHHHHhhccCCCcEEEEECCCCCCcc------CceEEeccccceeeeeeecccCcEE
Confidence 54 568899999999999999999876321 1111112334689999999999987
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-22 Score=170.65 Aligned_cols=256 Identities=15% Similarity=0.207 Sum_probs=177.4
Q ss_pred eccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEE--eCCCCcEEEEEEcCCCCEEEEEeC-CCcEEEE
Q psy14815 85 LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL--EGHENEVKSVTWSKNGQFLATCSR-DKSVWVW 161 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~v~~l~~~~~~~~l~~~~~-dg~i~vw 161 (479)
.+.+|.+.|++++|+.||++|+|++.|++|++|+++.-....-+.+ .-.-+-.+.+.|.||-+-+++... ..++++|
T Consensus 81 ~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vy 160 (420)
T KOG2096|consen 81 VLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVY 160 (420)
T ss_pred hhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEE
Confidence 4579999999999999999999999999999999875321111111 111235678999998876665554 4579999
Q ss_pred EeCCCCce---------eeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEE
Q psy14815 162 EVGEEDEY---------ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLA 232 (479)
Q Consensus 162 d~~~~~~~---------~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 232 (479)
.+...+.- .....-..|...+..+-....+.+|++++.|..|.+|+++. . .+..+......-+..+
T Consensus 161 k~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lkG-q----~L~~idtnq~~n~~aa 235 (420)
T KOG2096|consen 161 KLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLKG-Q----LLQSIDTNQSSNYDAA 235 (420)
T ss_pred EeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecCC-c----eeeeecccccccccee
Confidence 87543210 01112234556666777777889999999999999999983 3 2555665666667788
Q ss_pred EccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 233 FDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 233 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
.||+|+++++++---.|++|..--...- ..+....+..++|| ...|..++|++++..+++.|.||++++||.
T Consensus 236 vSP~GRFia~~gFTpDVkVwE~~f~kdG-------~fqev~rvf~LkGH-~saV~~~aFsn~S~r~vtvSkDG~wriwdt 307 (420)
T KOG2096|consen 236 VSPDGRFIAVSGFTPDVKVWEPIFTKDG-------TFQEVKRVFSLKGH-QSAVLAAAFSNSSTRAVTVSKDGKWRIWDT 307 (420)
T ss_pred eCCCCcEEEEecCCCCceEEEEEeccCc-------chhhhhhhheeccc-hhheeeeeeCCCcceeEEEecCCcEEEeec
Confidence 9999999999999889999986332211 11222345678887 889999999999999999999999999998
Q ss_pred CCCCCCCCceee-EEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 313 NPEAGDSDMVSF-DLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 313 ~~~~~~~~~~~~-~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
+-.-...+.+.. ..-...+....+....++.||.|+.||..
T Consensus 308 dVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s 349 (420)
T KOG2096|consen 308 DVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVS 349 (420)
T ss_pred cceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEee
Confidence 765322211111 00001111222333488999999988654
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.1e-22 Score=173.98 Aligned_cols=307 Identities=13% Similarity=0.115 Sum_probs=217.4
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
+.+.+.+|.+.|+++.|+.++++|++|+.|..+++|+++.....+.- ...
T Consensus 48 ~qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~------------------------------KPI 97 (609)
T KOG4227|consen 48 CQKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTP------------------------------KPI 97 (609)
T ss_pred hhhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCC------------------------------CCc
Confidence 45678899999999999999999999999999999998642211110 111
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd 162 (479)
.+....|.+.|.|++|.....++++|+.+++|...|+++.+...+..-....+.|+.+..+|-.+.|++.+.+|.|.+||
T Consensus 98 ~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D 177 (609)
T KOG4227|consen 98 GVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFID 177 (609)
T ss_pred eeccCccccceEEEEEccCCeeEecCCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEe
Confidence 12224677999999999999999999999999999999987333333233345899999999889999999999999999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEe---eeeecCCCccEEEEEEccCCC
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWIN---FATLKSHTSTVWSLAFDRIGS 238 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~ 238 (479)
.+..........+.........+.|+|. ..+|++.+..+-+-+||.+........ ...+......-.++.|+|+|+
T Consensus 178 ~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~ 257 (609)
T KOG4227|consen 178 NRDRQNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGN 257 (609)
T ss_pred ccCCCCCCceeeecCCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCC
Confidence 9986522222223334556788999995 478888899999999999976531111 111222222336788999999
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc-----ccccEEEEEecCCCCeEEEEeCCCeEEEcccC
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-----HGRTIYDISWCHLTDLIATACGDDAIRIFKEN 313 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~ 313 (479)
.|++.-.-..-.+||+..... ++..+... ....+.+++|.-+.. +++|+.+-.|++|.+.
T Consensus 258 Q~msiRR~~~P~~~D~~S~R~--------------~V~k~D~N~~GY~N~~T~KS~~F~~D~~-v~tGSD~~~i~~WklP 322 (609)
T KOG4227|consen 258 QFMSIRRGKCPLYFDFISQRC--------------FVLKSDHNPNGYCNIKTIKSMTFIDDYT-VATGSDHWGIHIWKLP 322 (609)
T ss_pred eehhhhccCCCEEeeeecccc--------------eeEeccCCCCcceeeeeeeeeeeeccee-eeccCcccceEEEecC
Confidence 998877666667777643211 11122110 123566788876554 9999999999999986
Q ss_pred CCCCCCC-------------ceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 314 PEAGDSD-------------MVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 314 ~~~~~~~-------------~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
....... ....+-...++++|.+.++.+.|+|....|.+.+
T Consensus 323 ~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H~~~l~SSG 376 (609)
T KOG4227|consen 323 RANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQHNNLLVSSG 376 (609)
T ss_pred CCccccCccccCcchhhCchhheecceeEEEecccccccceeecCCcceEeccc
Confidence 5432111 0112233456689999999999999998887776
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.7e-22 Score=184.60 Aligned_cols=261 Identities=17% Similarity=0.288 Sum_probs=188.8
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
++....|.+.|..+.|.|....|++++-|.+++.||+...+.... .
T Consensus 93 lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~----------------------------------~ 138 (720)
T KOG0321|consen 93 LKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGG----------------------------------R 138 (720)
T ss_pred hcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecc----------------------------------e
Confidence 345568999999999999767899999999999999987665432 1
Q ss_pred EeccccCCcEEEEEECCC-CCEEEEEECCCeEEEEECCCCeE-------------------------EEeEEEeCCCCcE
Q psy14815 84 ILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQF-------------------------ECNATLEGHENEV 137 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~~~~-------------------------~~~~~~~~~~~~v 137 (479)
...+|...|.+++|.|. ...|++|+.||.|.|||++-... ..+..-..+...+
T Consensus 139 -~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti 217 (720)
T KOG0321|consen 139 -LNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTI 217 (720)
T ss_pred -eecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCce
Confidence 23689999999999994 57889999999999999863210 0011112333444
Q ss_pred EE---EEEcCCCCEEEEEeC-CCcEEEEEeCCCCcee-----eeeeeecc---ccceeEEEEecCCCEEEEEEcCCcEEE
Q psy14815 138 KS---VTWSKNGQFLATCSR-DKSVWVWEVGEEDEYE-----CAAVINAH---IQDVKKVRFHPFDNILASASYDDTVKL 205 (479)
Q Consensus 138 ~~---l~~~~~~~~l~~~~~-dg~i~vwd~~~~~~~~-----~~~~~~~~---~~~v~~l~~~~~~~~l~~~~~dg~i~i 205 (479)
.+ +.+..|...|++++. |+.|+|||++...... ....+..| ...+.++.....|.+|++.+.|+.|+.
T Consensus 218 ~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ 297 (720)
T KOG0321|consen 218 FSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYF 297 (720)
T ss_pred eeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEE
Confidence 44 445567888998888 9999999999753211 11112222 334677888888899999999999999
Q ss_pred EecCCcccceEeeeeecCCCc--cEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccc
Q psy14815 206 FKEDKAEADWINFATLKSHTS--TVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 283 (479)
Q Consensus 206 ~d~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (479)
|++..... .++..+.++.. ....-..+|++.++++|+.|...++|.+...... ...+.+| .
T Consensus 298 ynm~s~s~--sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~--------------~~~l~Gh-t 360 (720)
T KOG0321|consen 298 YNMRSLSI--SPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAP--------------PALLLGH-T 360 (720)
T ss_pred EeccccCc--CchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCC--------------hhhhhCc-c
Confidence 99987654 22333333322 1223346899999999999999999998766543 3456666 7
Q ss_pred ccEEEEEecCCC-CeEEEEeCCCeEEEcccCCCC
Q psy14815 284 RTIYDISWCHLT-DLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 284 ~~i~~l~~~~~~-~~l~~~~~dg~i~vw~~~~~~ 316 (479)
..|++++|.|.. .-++++++|..+++|++..+-
T Consensus 361 ~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~l 394 (720)
T KOG0321|consen 361 REVTTVRWLPSATTPVATCSDDFRVKIWRLSNGL 394 (720)
T ss_pred eEEEEEeeccccCCCceeeccCcceEEEeccCch
Confidence 899999999853 347777999999999996553
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-21 Score=165.31 Aligned_cols=228 Identities=18% Similarity=0.256 Sum_probs=182.2
Q ss_pred eccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCC--EEEEEeCCCcEEEEE
Q psy14815 85 LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ--FLATCSRDKSVWVWE 162 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~--~l~~~~~dg~i~vwd 162 (479)
....|..+|++++.+ +.++++|+.|-+|+|||+++.. ....+-.|.+.|+++.|.+.-. .|++|+.||.|.+|+
T Consensus 38 ~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~--qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~ 113 (362)
T KOG0294|consen 38 AFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRK--QLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWR 113 (362)
T ss_pred cccccccceeEEEec--ceeEeccCCCCcEEEEeccchh--hhcceeccccceEEEEecCCcchhheeeecCCCcEEEEE
Confidence 457899999999995 8999999999999999999875 5677778999999999998665 899999999999999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
...- ..+..+++|...|+.++.+|.+++-++.+.|+.++.||+-.+...+ +..+. ..-+.+.|+|.|.+++.
T Consensus 114 ~~~W---~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~--v~~L~---~~at~v~w~~~Gd~F~v 185 (362)
T KOG0294|consen 114 VGSW---ELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAF--VLNLK---NKATLVSWSPQGDHFVV 185 (362)
T ss_pred cCCe---EEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccce--eeccC---CcceeeEEcCCCCEEEE
Confidence 9765 8889999999999999999999999999999999999998877522 22222 22234899999999988
Q ss_pred eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCce
Q psy14815 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMV 322 (479)
Q Consensus 243 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 322 (479)
++.++ |-+|.+....... .+.. ...+.++.|. ++..|++|..|+.|++||.+...
T Consensus 186 ~~~~~-i~i~q~d~A~v~~---------------~i~~--~~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ds~~------ 240 (362)
T KOG0294|consen 186 SGRNK-IDIYQLDNASVFR---------------EIEN--PKRILCATFL-DGSELLVGGDNEWISLKDTDSDT------ 240 (362)
T ss_pred EeccE-EEEEecccHhHhh---------------hhhc--cccceeeeec-CCceEEEecCCceEEEeccCCCc------
Confidence 87664 8999875543221 1111 2346666665 45688899999999999999865
Q ss_pred eeEEEeccccccccceeEEEe--cCCCCCCCcc
Q psy14815 323 SFDLVHTEHRAHNQDVNCVAW--NPVVPEPQKT 353 (479)
Q Consensus 323 ~~~~~~~~~~~h~~~v~~~~~--sp~~~~l~~~ 353 (479)
....+.+|...|-++.+ .|++.+|.+.
T Consensus 241 ----~~~~~~AH~~RVK~i~~~~~~~~~~lvTa 269 (362)
T KOG0294|consen 241 ----PLTEFLAHENRVKDIASYTNPEHEYLVTA 269 (362)
T ss_pred ----cceeeecchhheeeeEEEecCCceEEEEe
Confidence 55556799999999874 4667777443
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.7e-22 Score=164.96 Aligned_cols=275 Identities=19% Similarity=0.351 Sum_probs=195.0
Q ss_pred cccccccccceEEEEECC-CCCeEEEeeCC-------CcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCC
Q psy14815 4 SQTLKGHQGRVWNVSWNP-QGTMISSCGED-------KNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESF 75 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~-~~~~l~t~~~d-------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~ 75 (479)
.++|..|.+.|+.++-+| +.+.|+|+..+ -.+.||.+........
T Consensus 56 skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~--------------------------- 108 (370)
T KOG1007|consen 56 SKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSN--------------------------- 108 (370)
T ss_pred hhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccc---------------------------
Confidence 466778888899988888 45566666432 1356776543211100
Q ss_pred CCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEE-----eCCCCcEEEEEEcC--CCCE
Q psy14815 76 GNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL-----EGHENEVKSVTWSK--NGQF 148 (479)
Q Consensus 76 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~-----~~~~~~v~~l~~~~--~~~~ 148 (479)
.........+...+-+.|.|+.|.|++..+++-. |..|.+|++..+... ...+ ..+....++-+|+| +++.
T Consensus 109 ~~tlE~v~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~-vaev~ss~s~e~~~~ftsg~WspHHdgnq 186 (370)
T KOG1007|consen 109 SSTLECVASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKI-VAEVLSSESAEMRHSFTSGAWSPHHDGNQ 186 (370)
T ss_pred cchhhHhhcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcch-heeecccccccccceecccccCCCCccce
Confidence 0011222222234556999999999999999887 789999999876521 2222 12456778889999 7777
Q ss_pred EEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCC-CEEEEEEcCCcEEEEecCCcccceEeeeeecCCCcc
Q psy14815 149 LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTST 227 (479)
Q Consensus 149 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 227 (479)
+++. .|+++..||+++.+. ....-..|...|+.+.|+|+. .+|++++.||.|++||.++.+ .++.++.+|...
T Consensus 187 v~tt-~d~tl~~~D~RT~~~--~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk---~pv~el~~HsHW 260 (370)
T KOG1007|consen 187 VATT-SDSTLQFWDLRTMKK--NNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTK---FPVQELPGHSHW 260 (370)
T ss_pred EEEe-CCCcEEEEEccchhh--hcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCC---ccccccCCCceE
Confidence 7776 679999999998753 334456888999999999976 578899999999999999876 478899999999
Q ss_pred EEEEEEccCC-CEEEEeeCCCeEEEEeccCCCCCCCCCCCCC---------CCc-----eEEEEEEeccccccEEEEEec
Q psy14815 228 VWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDN---------DSV-----WKCVCTLSGHHGRTIYDISWC 292 (479)
Q Consensus 228 v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---------~~~-----~~~~~~~~~~~~~~i~~l~~~ 292 (479)
|+++.|+|.- +.+++++.|..|.+|....-.....+..... ... ...+.++..| ...|++++|+
T Consensus 261 vW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydeh-EDSVY~~aWS 339 (370)
T KOG1007|consen 261 VWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEH-EDSVYALAWS 339 (370)
T ss_pred EEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhccccccccccccccc-ccceEEEeec
Confidence 9999999964 6678999999999998755443222211110 011 1234567776 8899999999
Q ss_pred CCCC-eEEEEeCCCeEEEcccCC
Q psy14815 293 HLTD-LIATACGDDAIRIFKENP 314 (479)
Q Consensus 293 ~~~~-~l~~~~~dg~i~vw~~~~ 314 (479)
.-.. .+|+-+.||.+.|=++..
T Consensus 340 sadPWiFASLSYDGRviIs~V~r 362 (370)
T KOG1007|consen 340 SADPWIFASLSYDGRVIISSVPR 362 (370)
T ss_pred cCCCeeEEEeccCceEEeecCCh
Confidence 7666 567779999998766544
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.7e-23 Score=201.37 Aligned_cols=234 Identities=21% Similarity=0.337 Sum_probs=182.1
Q ss_pred cccCCcEEEEEECCCCCE----EEEEECCCeEEEEECCC----CeEEEeEEEeCCCCcEEEEEEcCC-CCEEEEEeCCCc
Q psy14815 87 DGHQRTIRETAWSPCGNF----IASASFDATTAVWDKRS----GQFECNATLEGHENEVKSVTWSKN-GQFLATCSRDKS 157 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~----l~t~~~dg~i~iwd~~~----~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~~~dg~ 157 (479)
.......+.++|.+.+.. |+.|..||.|.+||... .....+..+..|.+.|..+.|++. ++.|++|+.||.
T Consensus 61 ~~s~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~ge 140 (1049)
T KOG0307|consen 61 LQSSNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGE 140 (1049)
T ss_pred ccccccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCc
Confidence 345678889999987654 89999999999999754 333456677889999999999994 559999999999
Q ss_pred EEEEEeCCCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCc--cEEEEEEc
Q psy14815 158 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTS--TVWSLAFD 234 (479)
Q Consensus 158 i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~--~v~~~~~~ 234 (479)
|.|||+...+...... -....+.|.+++|+. ....|++++.+|.+.|||++..+. +..+..+.+ .+..+.|+
T Consensus 141 I~iWDlnn~~tP~~~~-~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~p----ii~ls~~~~~~~~S~l~Wh 215 (1049)
T KOG0307|consen 141 ILIWDLNKPETPFTPG-SQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKP----IIKLSDTPGRMHCSVLAWH 215 (1049)
T ss_pred EEEeccCCcCCCCCCC-CCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCc----ccccccCCCccceeeeeeC
Confidence 9999998864321111 222456799999997 457889999999999999997653 444444433 57899999
Q ss_pred cCC-CEEEEeeCCC---eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCC-CeEEEEeCCCeEEE
Q psy14815 235 RIG-SRLATCSDDA---TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRI 309 (479)
Q Consensus 235 ~~~-~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~-~~l~~~~~dg~i~v 309 (479)
|+. ..+++++.|. .|.+||+|.... +++++++| ...|.++.|++.+ .+|++++.|+.|.+
T Consensus 216 P~~aTql~~As~dd~~PviqlWDlR~ass--------------P~k~~~~H-~~GilslsWc~~D~~lllSsgkD~~ii~ 280 (1049)
T KOG0307|consen 216 PDHATQLLVASGDDSAPVIQLWDLRFASS--------------PLKILEGH-QRGILSLSWCPQDPRLLLSSGKDNRIIC 280 (1049)
T ss_pred CCCceeeeeecCCCCCceeEeecccccCC--------------chhhhccc-ccceeeeccCCCCchhhhcccCCCCeeE
Confidence 986 4566666543 699999976653 35677776 8899999999866 89999999999999
Q ss_pred cccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 310 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 310 w~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
|+.++++ .+..+ ......+..+.|+|..+.+
T Consensus 281 wN~~tgE---------vl~~~-p~~~nW~fdv~w~pr~P~~ 311 (1049)
T KOG0307|consen 281 WNPNTGE---------VLGEL-PAQGNWCFDVQWCPRNPSV 311 (1049)
T ss_pred ecCCCce---------Eeeec-CCCCcceeeeeecCCCcch
Confidence 9999997 44444 4566789999999998844
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.5e-21 Score=185.48 Aligned_cols=242 Identities=19% Similarity=0.279 Sum_probs=188.7
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCC
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 166 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~ 166 (479)
..|....+.++|.|+|.+|++++.||.|++|+..... .....+..+...|.+++.. +.+|++|+.+++|.+|.+..+
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~-e~P~ti~~~g~~v~~ia~~--s~~f~~~s~~~tv~~y~fps~ 86 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDE-EEPETIDISGELVSSIACY--SNHFLTGSEQNTVLRYKFPSG 86 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcc-cCCchhhccCceeEEEeec--ccceEEeeccceEEEeeCCCC
Confidence 5789999999999999999999999999999876552 1222333367778888764 558999999999999999887
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCC
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD 246 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 246 (479)
..-. .+....-++++++|+-+|++++.|+.|-.|++.+...... ...+++|.++|.++.|+|++++||+.+.|
T Consensus 87 ~~~~---iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~----~~~lrgh~apVl~l~~~p~~~fLAvss~d 159 (933)
T KOG1274|consen 87 EEDT---ILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQ----EKVLRGHDAPVLQLSYDPKGNFLAVSSCD 159 (933)
T ss_pred Cccc---eeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccch----heeecccCCceeeeeEcCCCCEEEEEecC
Confidence 4332 3444467899999999999999999999999999986654 67889999999999999999999999999
Q ss_pred CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEE
Q psy14815 247 ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 326 (479)
Q Consensus 247 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~ 326 (479)
|.|++||+........+..... .........+..++|+|++..++..+.|+.|++|+....+ .
T Consensus 160 G~v~iw~~~~~~~~~tl~~v~k--------~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we---------~ 222 (933)
T KOG1274|consen 160 GKVQIWDLQDGILSKTLTGVDK--------DNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWE---------L 222 (933)
T ss_pred ceEEEEEcccchhhhhcccCCc--------cccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCce---------e
Confidence 9999999976544322211100 0011114567889999998888888899999999998876 2
Q ss_pred Eeccc-cccccceeEEEecCCCCCCCcccc
Q psy14815 327 VHTEH-RAHNQDVNCVAWNPVVPEPQKTNL 355 (479)
Q Consensus 327 ~~~~~-~~h~~~v~~~~~sp~~~~l~~~~~ 355 (479)
...+. ..+...+..+.|||.|+|||.+.+
T Consensus 223 ~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~ 252 (933)
T KOG1274|consen 223 QFKLRDKLSSSKFSDLQWSPNGKYIAASTL 252 (933)
T ss_pred heeecccccccceEEEEEcCCCcEEeeecc
Confidence 22221 234445999999999999987754
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-21 Score=173.73 Aligned_cols=241 Identities=12% Similarity=0.179 Sum_probs=187.7
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEEeCCCC
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ-FLATCSRDKSVWVWEVGEED 167 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~vwd~~~~~ 167 (479)
..++|+++.|+|..+.+++++.|++++||.+....-..++.+.-...+|.+..|.|+|. .+++++....+..||+.+.+
T Consensus 212 s~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak 291 (514)
T KOG2055|consen 212 SHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAK 291 (514)
T ss_pred CcCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccc
Confidence 45799999999999999999999999999987655445566665678999999999999 89999999999999998875
Q ss_pred ceeeeeeeeccc-cceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCC
Q psy14815 168 EYECAAVINAHI-QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD 246 (479)
Q Consensus 168 ~~~~~~~~~~~~-~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 246 (479)
. ..+....++. ..+.....+|++++|+..+..|.|.+....++.. +.+++ -.+.|..++|+.+++.|++++.+
T Consensus 292 ~-~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~el----i~s~K-ieG~v~~~~fsSdsk~l~~~~~~ 365 (514)
T KOG2055|consen 292 V-TKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKEL----ITSFK-IEGVVSDFTFSSDSKELLASGGT 365 (514)
T ss_pred c-ccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhh----hheee-eccEEeeEEEecCCcEEEEEcCC
Confidence 3 2333333333 4577888999999999999999999998886653 44443 45789999999999999999999
Q ss_pred CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEE
Q psy14815 247 ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 326 (479)
Q Consensus 247 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~ 326 (479)
|.|.+||++.. .+++++.....-.-++++.++++.|||+||..|.|.|||.++.-...... +
T Consensus 366 GeV~v~nl~~~---------------~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~Pk---P 427 (514)
T KOG2055|consen 366 GEVYVWNLRQN---------------SCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPK---P 427 (514)
T ss_pred ceEEEEecCCc---------------ceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCC---c
Confidence 99999999554 55666665323344677778999999999999999999976543111110 1
Q ss_pred EeccccccccceeEEEecCCCCCCCccc
Q psy14815 327 VHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 327 ~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+..+ ..-...|+++.|+||++.||.++
T Consensus 428 ik~~-dNLtt~Itsl~Fn~d~qiLAiaS 454 (514)
T KOG2055|consen 428 IKTV-DNLTTAITSLQFNHDAQILAIAS 454 (514)
T ss_pred hhhh-hhhheeeeeeeeCcchhhhhhhh
Confidence 1111 23346799999999999997765
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.7e-21 Score=169.05 Aligned_cols=288 Identities=19% Similarity=0.315 Sum_probs=205.1
Q ss_pred ccceEEEEECCCCC-eEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 11 QGRVWNVSWNPQGT-MISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 11 ~~~V~~l~~s~~~~-~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
..+|..+.|.+... .|+||+.|..|+||-+..++.-..- ........+..|
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~----------------------------~~V~y~s~Ls~H 64 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGD----------------------------MKVEYLSSLSRH 64 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCc----------------------------eeEEEeecccCC
Confidence 46899999998766 9999999999999988665542210 001112224689
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECC--------C------CeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKR--------S------GQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 155 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~--------~------~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d 155 (479)
...|+++.|+|+|.+|++|+.+|.|.+|-.. + ..+.....+.+|...|+.++|+|++.++++++.|
T Consensus 65 ~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~d 144 (434)
T KOG1009|consen 65 TRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVD 144 (434)
T ss_pred cceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeecc
Confidence 9999999999999999999999999999765 2 2356677888999999999999999999999999
Q ss_pred CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEee----eee--c-------
Q psy14815 156 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF----ATL--K------- 222 (479)
Q Consensus 156 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~----~~~--~------- 222 (479)
..+++||+..+ .....+..|...+..++|.|-++++++-+.|...+.+++.........- ... .
T Consensus 145 ns~~l~Dv~~G---~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~ 221 (434)
T KOG1009|consen 145 NSVRLWDVHAG---QLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKST 221 (434)
T ss_pred ceEEEEEeccc---eeEeeccccccccceeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCccee
Confidence 99999999998 6778889999999999999999999999988877777665332110000 000 0
Q ss_pred --CCC----ccEEEEEEccCCCEEEEeeC----CC-----eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEE
Q psy14815 223 --SHT----STVWSLAFDRIGSRLATCSD----DA-----TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIY 287 (479)
Q Consensus 223 --~~~----~~v~~~~~~~~~~~l~s~~~----dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 287 (479)
.|. .-...++|+|+|..+++.+. .+ ..++|+-.... ++...+.+. ..+..
T Consensus 222 rLfhDeTlksFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~--------------rP~~~lp~~-~k~~l 286 (434)
T KOG1009|consen 222 RLFHDETLKSFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLK--------------RPAARLPSP-KKPAL 286 (434)
T ss_pred eeeecCchhhhhhhcccCCCCcEEEcccceeeeCCceeeceeEeecccccc--------------CceeecCCC-CcceE
Confidence 011 12356788999999887542 22 22444322111 122222222 33333
Q ss_pred EEEecC------------------CCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCC
Q psy14815 288 DISWCH------------------LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPE 349 (479)
Q Consensus 288 ~l~~~~------------------~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 349 (479)
.+.|+| -+-.++.++. ..|++||.++.. ++..+..-|-..++.++|++||..
T Consensus 287 avr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~-~svyvydtq~~~---------P~~~v~nihy~~iTDiaws~dg~~ 356 (434)
T KOG1009|consen 287 AVRFSPVYYELRPLSSEKFLFVLPYRLVFAIATK-NSVYVYDTQTLE---------PLAVVDNIHYSAITDIAWSDDGSV 356 (434)
T ss_pred EEEeeeeEEEeccccccccccccccceEEEEeec-ceEEEecccccc---------ceEEEeeeeeeeecceeecCCCcE
Confidence 344333 2334566654 589999999876 455555678899999999999999
Q ss_pred CCccc
Q psy14815 350 PQKTN 354 (479)
Q Consensus 350 l~~~~ 354 (479)
|...+
T Consensus 357 l~vSS 361 (434)
T KOG1009|consen 357 LLVSS 361 (434)
T ss_pred EEEec
Confidence 97665
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.5e-21 Score=162.33 Aligned_cols=246 Identities=20% Similarity=0.308 Sum_probs=188.2
Q ss_pred cccccceEEEEECC-CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 8 KGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 8 ~~h~~~V~~l~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
.+|+-.|..+.|-| |..++.+++-|.++++||..+-+....|
T Consensus 98 ~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F------------------------------------- 140 (397)
T KOG4283|consen 98 NGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDF------------------------------------- 140 (397)
T ss_pred ccceeeeeeeEEeeecCceeecccccceEEEeecccceeeEEe-------------------------------------
Confidence 57999999999999 6668888999999999999876654433
Q ss_pred cccCCcEEEEEECC---CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEE
Q psy14815 87 DGHQRTIRETAWSP---CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ-FLATCSRDKSVWVWE 162 (479)
Q Consensus 87 ~~~~~~v~~v~~~~---~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~vwd 162 (479)
...+.|.+-+++| .-.++|+|..+-.|++-|+.+|. ..+.+.+|.+.|.++.|+|... .|++|+.||.|++||
T Consensus 141 -~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs--~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWD 217 (397)
T KOG4283|consen 141 -KMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGS--FSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWD 217 (397)
T ss_pred -ecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCc--ceeeeccccCceEEEEeccCceeEEEecCCCceEEEEE
Confidence 2346677777887 34678888889999999999997 7799999999999999999665 578999999999999
Q ss_pred eCCCC------------ceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCc----
Q psy14815 163 VGEED------------EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTS---- 226 (479)
Q Consensus 163 ~~~~~------------~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~---- 226 (479)
++... ..+..+.-..|.+.+..++|..++.++++.+.|..+++|+..++........... |..
T Consensus 218 iRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~-~n~~~~~ 296 (397)
T KOG4283|consen 218 IRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLREFGPII-HNQTTSF 296 (397)
T ss_pred eecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCccccccccccc-ccccccc
Confidence 98541 1222333457888999999999999999999999999999988764322221111 111
Q ss_pred cEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCe
Q psy14815 227 TVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDA 306 (479)
Q Consensus 227 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~ 306 (479)
.+. +. +.+...++---.++.+.++++.. +..++.+..| ...|.+..+-|+-+...+|..|+.
T Consensus 297 ~~~-~~-~~~s~vfv~~p~~~~lall~~~s---------------gs~ir~l~~h-~k~i~c~~~~~~fq~~~tg~~d~n 358 (397)
T KOG4283|consen 297 AVH-IQ-SMDSDVFVLFPNDGSLALLNLLE---------------GSFVRRLSTH-LKRINCAAYRPDFEQCFTGDMNGN 358 (397)
T ss_pred eEE-Ee-ecccceEEEEecCCeEEEEEccC---------------ceEEEeeecc-cceeeEEeecCchhhhhccccCCc
Confidence 111 22 22333344344457788887733 3557777787 889999999999999999999999
Q ss_pred EEEccc
Q psy14815 307 IRIFKE 312 (479)
Q Consensus 307 i~vw~~ 312 (479)
|..|-.
T Consensus 359 i~~w~p 364 (397)
T KOG4283|consen 359 IYMWSP 364 (397)
T ss_pred cccccc
Confidence 999976
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-21 Score=167.91 Aligned_cols=251 Identities=22% Similarity=0.308 Sum_probs=188.4
Q ss_pred CeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECC--C
Q psy14815 24 TMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP--C 101 (479)
Q Consensus 24 ~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~ 101 (479)
+.+|++-..|+|++||..+++.+..+ .++...+..++|.. .
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~f-------------------------------------k~~~~~~N~vrf~~~ds 83 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEF-------------------------------------KGPPATTNGVRFISCDS 83 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhhee-------------------------------------cCCCCcccceEEecCCC
Confidence 45888888999999999888877776 34556666777765 4
Q ss_pred CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCC-CcEEEEEEcCCCCEEEEEeC----CCcEEEEEeCCCCceeeeeeee
Q psy14815 102 GNFIASASFDATTAVWDKRSGQFECNATLEGHE-NEVKSVTWSKNGQFLATCSR----DKSVWVWEVGEEDEYECAAVIN 176 (479)
Q Consensus 102 ~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~l~~~~~----dg~i~vwd~~~~~~~~~~~~~~ 176 (479)
...+.+|+.||+|++||+++...........+. .+..|++.+-.++.+++|+. +-.|.+||+|..++. .-....
T Consensus 84 ~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~-l~~~~e 162 (376)
T KOG1188|consen 84 PHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQL-LRQLNE 162 (376)
T ss_pred CCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccch-hhhhhh
Confidence 578999999999999999987655566666665 46677777767888888864 667999999987541 223456
Q ss_pred ccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC-CEEEEeeCCCeEEEEec
Q psy14815 177 AHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SRLATCSDDATVKIWKE 254 (479)
Q Consensus 177 ~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~ 254 (479)
.|...|++++|+| +.++|++|+.||.|.+||+.....+ ..+...-.|.+.|.++.|..++ +.|.+-+...+..+|++
T Consensus 163 SH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~Ee-DaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~el 241 (376)
T KOG1188|consen 163 SHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEE-DALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYEL 241 (376)
T ss_pred hccCcceeEEecCCCCCeEEeecccceEEeeecCCCcch-hhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEc
Confidence 8999999999999 5589999999999999999876432 2334445688889999998776 56888889999999999
Q ss_pred cCCCCCCCCCCCC----------------------C------------------------CCceEEEEEEeccccccEEE
Q psy14815 255 YKPGNSAGIPTPD----------------------N------------------------DSVWKCVCTLSGHHGRTIYD 288 (479)
Q Consensus 255 ~~~~~~~~~~~~~----------------------~------------------------~~~~~~~~~~~~~~~~~i~~ 288 (479)
........++.+. . ......+..+.+++...|++
T Consensus 242 e~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~ 321 (376)
T KOG1188|consen 242 EDGSEETWLENPDVSADDLRKEDNCDYVINEHSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRD 321 (376)
T ss_pred cCCChhhcccCccchhhhHHhhhhhhheeecccCCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHH
Confidence 8765433321110 0 01112233445556778888
Q ss_pred EEecCCCCeEEEEeCCCeEEEcccC
Q psy14815 289 ISWCHLTDLIATACGDDAIRIFKEN 313 (479)
Q Consensus 289 l~~~~~~~~l~~~~~dg~i~vw~~~ 313 (479)
+.|...+.++.+|++||.+.+|..+
T Consensus 322 i~~~~~~~~l~TGGEDG~l~~Wk~~ 346 (376)
T KOG1188|consen 322 ILFDVKNDVLYTGGEDGLLQAWKVE 346 (376)
T ss_pred HhhhcccceeeccCCCceEEEEecC
Confidence 8998888999999999999999863
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.5e-20 Score=175.98 Aligned_cols=345 Identities=16% Similarity=0.208 Sum_probs=236.3
Q ss_pred ccccccccccceEEEEECCCC---CeEEEeeCCCcEEEEecccccccccccCCC--------------------------
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQG---TMISSCGEDKNIRLWVMVIREPYEKLHGLP-------------------------- 53 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~---~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~-------------------------- 53 (479)
+++.|.+|..+++.+.+.|.. .++.+++.||+|++||...+..++.+...-
T Consensus 49 ~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~~~~~~v~~~~~~~~~a~~s~~~~~s~~~~~ 128 (792)
T KOG1963|consen 49 CITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTFDNNLPVHALVYKPAQADISANVYVSVEDYS 128 (792)
T ss_pred hhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEEecCCceeEEEechhHhCccceeEeecccce
Confidence 567899999999999999854 367899999999999988777665543210
Q ss_pred -----------------------------------------ccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCc
Q psy14815 54 -----------------------------------------VETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRT 92 (479)
Q Consensus 54 -----------------------------------------~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 92 (479)
....+.....+..+.+|...... ...........|...
T Consensus 129 ~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~ge~~~i~~~~~~~~~~v~~~~-~~~~~~~~~~~Htf~ 207 (792)
T KOG1963|consen 129 ILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNSGEFKGIVHMCKIHIYFVPKHT-KHTSSRDITVHHTFN 207 (792)
T ss_pred eeeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcCCceEEEEEEeeeEEEEEecccc-eeeccchhhhhhccc
Confidence 00011111223445556555322 222222233567778
Q ss_pred EEEEEECCCCCEEEEEECCCeEEEEECCC--CeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCcee
Q psy14815 93 IRETAWSPCGNFIASASFDATTAVWDKRS--GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 170 (479)
Q Consensus 93 v~~v~~~~~~~~l~t~~~dg~i~iwd~~~--~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 170 (479)
++|.++||+++++++|..||.|.+|.--. +.-...+.+.=|...|.+++|+++|.+|++|+..|.+.+|.+.+++
T Consensus 208 ~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~--- 284 (792)
T KOG1963|consen 208 ITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK--- 284 (792)
T ss_pred ceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC---
Confidence 99999999999999999999999996432 3323456677788999999999999999999999999999999975
Q ss_pred eeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeec--------CCCccEEEEEEccCCCEEEE
Q psy14815 171 CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLK--------SHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 171 ~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~s 242 (479)
.+-+..-.++|..+.++||+.+.+....|..|.+......... ..+..+. ...+-.+.++++|.-+.++-
T Consensus 285 -kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k-~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vl 362 (792)
T KOG1963|consen 285 -KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIK-STISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVL 362 (792)
T ss_pred -cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhh-hhccCccCCCccccccccccceeEEEcCCCCceee
Confidence 2334455788999999999999999999999999887533210 0011111 12344567788887677777
Q ss_pred eeCCCeEEEEeccCCCCCCCCCC----------------------------------------------------CCCCC
Q psy14815 243 CSDDATVKIWKEYKPGNSAGIPT----------------------------------------------------PDNDS 270 (479)
Q Consensus 243 ~~~dg~i~iwd~~~~~~~~~~~~----------------------------------------------------~~~~~ 270 (479)
.+..|.|.+||+.+......+.. ....+
T Consensus 363 n~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~k 442 (792)
T KOG1963|consen 363 NGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSK 442 (792)
T ss_pred cCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcc
Confidence 88888888888765433322100 00112
Q ss_pred ceEEEEEEeccccccEEEEEecC-CCC-eEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCC
Q psy14815 271 VWKCVCTLSGHHGRTIYDISWCH-LTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP 348 (479)
Q Consensus 271 ~~~~~~~~~~~~~~~i~~l~~~~-~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~ 348 (479)
++.+...+...|+..+...++.+ ... .+++++.||.+++|-+...+........-.+..+...|..++++++||.||.
T Consensus 443 t~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGs 522 (792)
T KOG1963|consen 443 TFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGS 522 (792)
T ss_pred eeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCCCc
Confidence 34444445554566655555554 333 7899999999999999666544333332233333345899999999999999
Q ss_pred CCCcc
Q psy14815 349 EPQKT 353 (479)
Q Consensus 349 ~l~~~ 353 (479)
.|+.+
T Consensus 523 lla~s 527 (792)
T KOG1963|consen 523 LLAVS 527 (792)
T ss_pred EEEEe
Confidence 88443
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-21 Score=179.35 Aligned_cols=127 Identities=22% Similarity=0.482 Sum_probs=102.1
Q ss_pred ccccccccceEEEEECC-CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 5 QTLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
-.|.+|.+.|+.+.|+| +..+|||||.|..|+||.+..+-. ..+ ....
T Consensus 73 ~~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~-q~L------------------------------Sape 121 (1012)
T KOG1445|consen 73 GILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHS-QKL------------------------------SAPE 121 (1012)
T ss_pred ceeecccceeeccCccccchhhhhcccCCCeeEEEecCCCcc-ccc------------------------------CCcc
Confidence 35678999999999999 666999999999999999863221 111 1112
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
....+..-.|.++.|+|...-|...+..|+++|||+.+++ ....+.+|...|.+..|+.||..+++++.|..|+|||-
T Consensus 122 ~~~g~~~~~vE~l~fHpTaDgil~s~a~g~v~i~D~stqk--~~~el~~h~d~vQSa~WseDG~llatscKdkqirifDP 199 (1012)
T KOG1445|consen 122 IDVGGGNVIVECLRFHPTADGILASGAHGSVYITDISTQK--TAVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDP 199 (1012)
T ss_pred eeecCCceEEEEeecccCcCceEEeccCceEEEEEcccCc--eeecccCCchhhhccccccCCceEeeecCCcceEEeCC
Confidence 2223455678999999976556555667999999999997 77889999999999999999999999999999999987
Q ss_pred C
Q psy14815 164 G 164 (479)
Q Consensus 164 ~ 164 (479)
+
T Consensus 200 R 200 (1012)
T KOG1445|consen 200 R 200 (1012)
T ss_pred c
Confidence 6
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.2e-22 Score=196.21 Aligned_cols=250 Identities=21% Similarity=0.351 Sum_probs=189.3
Q ss_pred cceEEEEECCCCCe----EEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecc
Q psy14815 12 GRVWNVSWNPQGTM----ISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSD 87 (479)
Q Consensus 12 ~~V~~l~~s~~~~~----l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~ 87 (479)
..-+.++|.+.|.. ||.|..||.|.+||...-. .+..........
T Consensus 65 ~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~-------------------------------~~~~~~~la~~~ 113 (1049)
T KOG0307|consen 65 NRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASII-------------------------------ANASEEVLATKS 113 (1049)
T ss_pred ccceeeeecccCCCccceeeccccCCceEEecchhhc-------------------------------cCcchHHHhhhc
Confidence 45677888886654 7778888999999864310 000001111236
Q ss_pred ccCCcEEEEEECCCC-CEEEEEECCCeEEEEECCCCeEEEeEEE--eCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEEe
Q psy14815 88 GHQRTIRETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATL--EGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vwd~ 163 (479)
.|.+.|..+.|++.+ ++||+|+.||.|.|||+..-+ .-..+ ....+.|.+++|+. ....|++++.+|.+.|||+
T Consensus 114 ~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~--tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDl 191 (1049)
T KOG0307|consen 114 KHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPE--TPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDL 191 (1049)
T ss_pred ccCCceeeeeccccCCceeeccCCCCcEEEeccCCcC--CCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccc
Confidence 799999999999965 599999999999999998754 22222 22457899999987 4457899999999999999
Q ss_pred CCCCceeeeeeeeccc--cceeEEEEecCC-CEEEEEEcCC---cEEEEecCCcccceEeeeeecCCCccEEEEEEccCC
Q psy14815 164 GEEDEYECAAVINAHI--QDVKKVRFHPFD-NILASASYDD---TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG 237 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~--~~v~~l~~~~~~-~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 237 (479)
+..+. +..+..+. ..+..++|+|+. ..+++++.|. .|.+||+|.... +.+.+.+|...|.++.|++.+
T Consensus 192 r~~~p---ii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~ass---P~k~~~~H~~GilslsWc~~D 265 (1049)
T KOG0307|consen 192 RKKKP---IIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASS---PLKILEGHQRGILSLSWCPQD 265 (1049)
T ss_pred cCCCc---ccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCC---chhhhcccccceeeeccCCCC
Confidence 98743 33333333 347899999976 5666666553 599999997664 577789999999999999976
Q ss_pred -CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC-eEEEEeCCCeEEEcccCCC
Q psy14815 238 -SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPE 315 (479)
Q Consensus 238 -~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~~dg~i~vw~~~~~ 315 (479)
.++++++.|+.|.+|+..++ +.+..+... +..+..+.|+|... .++.++.||.|.||.+...
T Consensus 266 ~~lllSsgkD~~ii~wN~~tg---------------Evl~~~p~~-~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~ 329 (1049)
T KOG0307|consen 266 PRLLLSSGKDNRIICWNPNTG---------------EVLGELPAQ-GNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGT 329 (1049)
T ss_pred chhhhcccCCCCeeEecCCCc---------------eEeeecCCC-CcceeeeeecCCCcchhhhheeccceeeeeeecC
Confidence 78899999999999998554 445555553 78999999999766 8889999999999999876
Q ss_pred C
Q psy14815 316 A 316 (479)
Q Consensus 316 ~ 316 (479)
.
T Consensus 330 ~ 330 (1049)
T KOG0307|consen 330 D 330 (1049)
T ss_pred C
Confidence 5
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.3e-21 Score=160.41 Aligned_cols=255 Identities=16% Similarity=0.315 Sum_probs=187.2
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
..+.|.+|..+|++++||+||+.|+|+|.|..|.+||+..|.+++.+
T Consensus 57 iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~ri--------------------------------- 103 (405)
T KOG1273|consen 57 IARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRI--------------------------------- 103 (405)
T ss_pred hhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEE---------------------------------
Confidence 45788999999999999999999999999999999999888876654
Q ss_pred EEeccccCCcEEEEEECCCC-CEEEEEECCCeEEEEECCCCeEEEeEEEeC---CCCcEEEEEEcCCCCEEEEEeCCCcE
Q psy14815 83 AILSDGHQRTIRETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEG---HENEVKSVTWSKNGQFLATCSRDKSV 158 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~---~~~~v~~l~~~~~~~~l~~~~~dg~i 158 (479)
...++|+.+.|+|.. +..+..-.+..-.+-++..++...+ .... .+....+..|.+.|+++++|...|.+
T Consensus 104 -----rf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~L-p~d~d~dln~sas~~~fdr~g~yIitGtsKGkl 177 (405)
T KOG1273|consen 104 -----RFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVL-PKDDDGDLNSSASHGVFDRRGKYIITGTSKGKL 177 (405)
T ss_pred -----EccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeec-cCCCccccccccccccccCCCCEEEEecCcceE
Confidence 356799999999943 4444444444455555554431111 1111 11122344688999999999999999
Q ss_pred EEEEeCCCCceeeeeeeeccc-cceeEEEEecCCCEEEEEEcCCcEEEEecCCccc-----ceEeeeeecC--CCccEEE
Q psy14815 159 WVWEVGEEDEYECAAVINAHI-QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA-----DWINFATLKS--HTSTVWS 230 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~-----~~~~~~~~~~--~~~~v~~ 230 (479)
.++|..+. +++..+.-.. ..|..+.++..|++|+.-+.|+.||.|+++.-.. ...+..+++. ...+-.+
T Consensus 178 lv~~a~t~---e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ 254 (405)
T KOG1273|consen 178 LVYDAETL---ECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKK 254 (405)
T ss_pred EEEecchh---eeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhh
Confidence 99999987 5555554444 6789999999999999999999999999872110 1111111111 1223467
Q ss_pred EEEccCCCEEEEeeC-CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEE
Q psy14815 231 LAFDRIGSRLATCSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 309 (479)
Q Consensus 231 ~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~v 309 (479)
++|+.+|.+++.++. ...++||.- ..+.+++.+.|..+....++.|+|-...+++- ..|.+++
T Consensus 255 ccfs~dgeYv~a~s~~aHaLYIWE~---------------~~GsLVKILhG~kgE~l~DV~whp~rp~i~si-~sg~v~i 318 (405)
T KOG1273|consen 255 CCFSGDGEYVCAGSARAHALYIWEK---------------SIGSLVKILHGTKGEELLDVNWHPVRPIIASI-ASGVVYI 318 (405)
T ss_pred eeecCCccEEEeccccceeEEEEec---------------CCcceeeeecCCchhheeecccccceeeeeec-cCCceEE
Confidence 889999999987764 356999985 44577888888766889999999998888877 6799999
Q ss_pred cccCCC
Q psy14815 310 FKENPE 315 (479)
Q Consensus 310 w~~~~~ 315 (479)
|.....
T Consensus 319 w~~~~~ 324 (405)
T KOG1273|consen 319 WAVVQV 324 (405)
T ss_pred EEeecc
Confidence 976543
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-20 Score=158.50 Aligned_cols=256 Identities=21% Similarity=0.358 Sum_probs=186.5
Q ss_pred ccccceEEEEECCCC-----CeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 9 GHQGRVWNVSWNPQG-----TMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~-----~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
.|.-+++.+.|.|+. .+|||++ | .+|+|.+...+........ +. ..+
T Consensus 94 d~~YP~tK~~wiPd~~g~~pdlLATs~-D-~LRlWri~~ee~~~~~~~~-------------------L~------~~k- 145 (364)
T KOG0290|consen 94 DHPYPVTKLMWIPDSKGVYPDLLATSS-D-FLRLWRIGDEESRVELQSV-------------------LN------NNK- 145 (364)
T ss_pred CCCCCccceEecCCccccCcchhhccc-C-eEEEEeccCcCCceehhhh-------------------hc------cCc-
Confidence 588899999999976 3667665 3 6999987642211110000 00 000
Q ss_pred EeccccCCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCe-EEEeEEEeCCCCcEEEEEEcCCC-CEEEEEeCCCcEEE
Q psy14815 84 ILSDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQ-FECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWV 160 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~v 160 (479)
...+..++++..|+. +-+++.+++-|-+..|||++++. ......+-.|..+|..++|...+ +.|++.+.||++|+
T Consensus 146 --ns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRm 223 (364)
T KOG0290|consen 146 --NSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRM 223 (364)
T ss_pred --ccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEE
Confidence 135678999999998 67899999999999999999873 22456788899999999999854 47899999999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCC-CEEEEEEcC-CcEEEEecCCcccceEeeeeecCCCccEEEEEEccC-C
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYD-DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-G 237 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~ 237 (479)
||++..+....+..-.....+...++|+++. +++++-..| ..|.+.|++.+. .++..+++|.+.|+.++|.|. .
T Consensus 224 FDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~---tpva~L~~H~a~VNgIaWaPhS~ 300 (364)
T KOG0290|consen 224 FDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPC---TPVARLRNHQASVNGIAWAPHSS 300 (364)
T ss_pred EEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCC---cceehhhcCcccccceEecCCCC
Confidence 9999876544444433335678889999844 677776544 569999999766 368889999999999999996 4
Q ss_pred CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCC-CCeEEEEeCCCeEEE
Q psy14815 238 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL-TDLIATACGDDAIRI 309 (479)
Q Consensus 238 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~-~~~l~~~~~dg~i~v 309 (479)
.+|+++++|..+.+||+........ ..++..+. .+..|+.+.|++. ..+++.+. +.++.+
T Consensus 301 ~hictaGDD~qaliWDl~q~~~~~~---------~dPilay~--a~~EVNqi~Ws~~~~Dwiai~~-~kklei 361 (364)
T KOG0290|consen 301 SHICTAGDDCQALIWDLQQMPRENG---------EDPILAYT--AGGEVNQIQWSSSQPDWIAICF-GKKLEI 361 (364)
T ss_pred ceeeecCCcceEEEEecccccccCC---------CCchhhhh--ccceeeeeeecccCCCEEEEEe-cCeeeE
Confidence 6899999999999999976544211 12233333 2668999999964 55777665 344443
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.8e-21 Score=178.78 Aligned_cols=247 Identities=16% Similarity=0.293 Sum_probs=194.8
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
++++|+||++.|+|++|+.||+++|+|+.|..|.+|+-.- .
T Consensus 45 llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~kl---------------------------------------E 85 (1081)
T KOG1538|consen 45 LLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKL---------------------------------------E 85 (1081)
T ss_pred cccccccccceEEEEEEccCCceeccCCCceeEEEecccc---------------------------------------c
Confidence 5789999999999999999999999999999999997421 1
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd 162 (479)
-.+...|.+.|.|+.|+|-.+.|++++. ...-+|...... +...+ ....+.+++|..||++++.|-.+|+|.+-+
T Consensus 86 G~LkYSH~D~IQCMsFNP~~h~LasCsL-sdFglWS~~qK~---V~K~k-ss~R~~~CsWtnDGqylalG~~nGTIsiRN 160 (1081)
T KOG1538|consen 86 GILKYSHNDAIQCMSFNPITHQLASCSL-SDFGLWSPEQKS---VSKHK-SSSRIICCSWTNDGQYLALGMFNGTISIRN 160 (1081)
T ss_pred ceeeeccCCeeeEeecCchHHHhhhcch-hhccccChhhhh---HHhhh-hheeEEEeeecCCCcEEEEeccCceEEeec
Confidence 1223679999999999999999999987 467889876653 22222 235788999999999999999999999876
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCC-----CEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFD-----NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG 237 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-----~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 237 (479)
-...+ ...+....+..++|.+++|+|.. ..+++.....++.+|.+.... +..-+.-.-...|+.+-++|
T Consensus 161 k~gEe-k~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~~-----Igk~r~L~FdP~CisYf~NG 234 (1081)
T KOG1538|consen 161 KNGEE-KVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSGKQ-----IGKDRALNFDPCCISYFTNG 234 (1081)
T ss_pred CCCCc-ceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEeccee-----ecccccCCCCchhheeccCC
Confidence 54432 23344445677899999999953 578888999999999887432 22233334445689999999
Q ss_pred CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 238 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 238 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
.+++.|+.|+.+++|-- .+..+.++.. .+..|+.++..|++++++.|+.||+|-.|++-...
T Consensus 235 Ey~LiGGsdk~L~~fTR----------------~GvrLGTvg~-~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~fST 296 (1081)
T KOG1538|consen 235 EYILLGGSDKQLSLFTR----------------DGVRLGTVGE-QDSWIWTVQAKPNSQYVVVGCQDGTIACYNLIFST 296 (1081)
T ss_pred cEEEEccCCCceEEEee----------------cCeEEeeccc-cceeEEEEEEccCCceEEEEEccCeeehhhhHHhH
Confidence 99999999999999962 2233445544 37899999999999999999999999999986543
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-19 Score=167.11 Aligned_cols=255 Identities=15% Similarity=0.129 Sum_probs=174.0
Q ss_pred cccccccccceEEEEECCCCCeE-EEeeCCCcEEEEecccccccccccCC---------CccceEEEe-ecCCcEEEecC
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMI-SSCGEDKNIRLWVMVIREPYEKLHGL---------PVETSLRQL-VEDKNIRLWGK 72 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l-~t~~~dg~v~iwd~~~~~~~~~~~~~---------~~~~~~~~~-~~~~~i~~w~~ 72 (479)
++++.+|. .+.+++|+|+++.+ ++++.++.|++||..+++....+... +++..++.. ..++.+.+||+
T Consensus 24 ~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~d~ 102 (300)
T TIGR03866 24 TRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPDPELFALHPNGKILYIANEDDNLVTVIDI 102 (300)
T ss_pred EEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCCccEEEECCCCCEEEEEcCCCCeEEEEEC
Confidence 45555554 46789999999976 56778899999999887765544322 334444443 45789999999
Q ss_pred CCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCC-eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEE
Q psy14815 73 ESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA-TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT 151 (479)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~ 151 (479)
+.... .. ...+...+.+++|+|++.+++++..++ .+.+||..+++. ..... ....+.+++|+++++++++
T Consensus 103 ~~~~~----~~--~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~--~~~~~-~~~~~~~~~~s~dg~~l~~ 173 (300)
T TIGR03866 103 ETRKV----LA--EIPVGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEI--VDNVL-VDQRPRFAEFTADGKELWV 173 (300)
T ss_pred CCCeE----Ee--EeeCCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeE--EEEEE-cCCCccEEEECCCCCEEEE
Confidence 74211 11 112234568899999999999988765 567789988753 22222 2234578999999998865
Q ss_pred E-eCCCcEEEEEeCCCCceeeeeeeecc-------ccceeEEEEecCCCEEEEE-EcCCcEEEEecCCcccceEeeeeec
Q psy14815 152 C-SRDKSVWVWEVGEEDEYECAAVINAH-------IQDVKKVRFHPFDNILASA-SYDDTVKLFKEDKAEADWINFATLK 222 (479)
Q Consensus 152 ~-~~dg~i~vwd~~~~~~~~~~~~~~~~-------~~~v~~l~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~ 222 (479)
+ ..++.|++||+++.+.. ..+..+ ......++|+|++++++++ +.++.+.+||.++.+. ...+
T Consensus 174 ~~~~~~~v~i~d~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~----~~~~- 245 (300)
T TIGR03866 174 SSEIGGTVSVIDVATRKVI---KKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEV----LDYL- 245 (300)
T ss_pred EcCCCCEEEEEEcCcceee---eeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcE----EEEE-
Confidence 5 46899999999987432 222211 1123468899999986554 4567899999986553 2222
Q ss_pred CCCccEEEEEEccCCCEEEEe-eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC
Q psy14815 223 SHTSTVWSLAFDRIGSRLATC-SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 293 (479)
Q Consensus 223 ~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~ 293 (479)
.+...+.+++|+|++++|+++ +.++.|++||+... +++.++.. +...+.++++|
T Consensus 246 ~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~---------------~~~~~~~~--~~~~~~~~~~~ 300 (300)
T TIGR03866 246 LVGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAAL---------------KVIKSIKV--GRLPWGVVVRP 300 (300)
T ss_pred EeCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCC---------------cEEEEEEc--ccccceeEeCC
Confidence 234578899999999999876 46899999998543 55566654 34557887765
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.1e-21 Score=158.64 Aligned_cols=283 Identities=15% Similarity=0.163 Sum_probs=196.2
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC----------CccceEEEeecCCcEEEecC
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL----------PVETSLRQLVEDKNIRLWGK 72 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~~i~~w~~ 72 (479)
+...|++|.+.|+++.|-.+++ |.+|..-|.|++|++.+......+..+ -.+..+.+-+.|..+.+|++
T Consensus 6 P~fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~d~l~tqgRd~~L~lw~i 84 (323)
T KOG0322|consen 6 PFFVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPNDSLDTQGRDPLLILWTI 84 (323)
T ss_pred CeeEeccccchheehhhccchh-hhcccccceEEEEEeecCccchhhhhhccceeeceeecCCcchhhcCCCceEEEEEc
Confidence 5667889999999999988764 999999999999999988776666522 12366777788899999988
Q ss_pred CCCCCceeeeEEeccccCCcEEEEEECCCC---------CEEEEEECCC-eEEEEECCCCeEEEeEEE----eCCCCcEE
Q psy14815 73 ESFGNKFTAKAILSDGHQRTIRETAWSPCG---------NFIASASFDA-TTAVWDKRSGQFECNATL----EGHENEVK 138 (479)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~---------~~l~t~~~dg-~i~iwd~~~~~~~~~~~~----~~~~~~v~ 138 (479)
.. .....-|.-.++++-|++.. ..++.-+... .+.+-|..... .+... .+..+.+.
T Consensus 85 a~--------s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~t--qv~i~dd~~~~Klgsvm 154 (323)
T KOG0322|consen 85 AY--------SAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTT--QVQIADDSERSKLGSVM 154 (323)
T ss_pred cC--------cceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccc--eeEccCchhccccCcee
Confidence 72 11123555566666666521 1111111100 11111211111 11111 12335666
Q ss_pred EEEEcC-CCC--EEEEEeCCCcEEEEEeCCCCc-------eeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEec
Q psy14815 139 SVTWSK-NGQ--FLATCSRDKSVWVWEVGEEDE-------YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE 208 (479)
Q Consensus 139 ~l~~~~-~~~--~l~~~~~dg~i~vwd~~~~~~-------~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~ 208 (479)
|..+.. ++. ++++|..+|.+.+||+..+.. ++.......|..+|.++.|.+.-..=++|+.+..+..|++
T Consensus 155 c~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl 234 (323)
T KOG0322|consen 155 CQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSL 234 (323)
T ss_pred eeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeee
Confidence 766543 333 577888999999999988621 2233445679999999999986666677888888999988
Q ss_pred CCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEE
Q psy14815 209 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYD 288 (479)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 288 (479)
............+.-..-.|..+..-||++.+++++.|+.||||+.++. .++..++.| ...|++
T Consensus 235 ~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl---------------~pLAVLkyH-sagvn~ 298 (323)
T KOG0322|consen 235 NHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTL---------------NPLAVLKYH-SAGVNA 298 (323)
T ss_pred ccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccC---------------Cchhhhhhh-hcceeE
Confidence 7543222222333334456888999999999999999999999998544 557788887 789999
Q ss_pred EEecCCCCeEEEEeCCCeEEEccc
Q psy14815 289 ISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 289 l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
++|+|+..++|+++.|+.|.+|++
T Consensus 299 vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 299 VAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred EEeCCCCchhhhccCCceEEeeec
Confidence 999999999999999999999986
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-20 Score=160.70 Aligned_cols=253 Identities=21% Similarity=0.357 Sum_probs=184.3
Q ss_pred cccceEEEEECCC----CCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 10 HQGRVWNVSWNPQ----GTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 10 h~~~V~~l~~s~~----~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
|...-..++|+-+ ..++|.|+.-|.|+|.|+.+++....+
T Consensus 88 ~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~------------------------------------ 131 (385)
T KOG1034|consen 88 HDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNY------------------------------------ 131 (385)
T ss_pred CCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccce------------------------------------
Confidence 6666777777642 347777778888888888777665544
Q ss_pred ccccCCcEEEEEECCCC-CEEEEEECCCeEEEEECCCCeEEEe-EEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 86 SDGHQRTIRETAWSPCG-NFIASASFDATTAVWDKRSGQFECN-ATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
.+|...|+.+.++|+. +++++++.|..|++|++++.....+ --+.+|.+.|.++.|+++|.+|++++.|.++++|++
T Consensus 132 -~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l 210 (385)
T KOG1034|consen 132 -RGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRL 210 (385)
T ss_pred -eccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEec
Confidence 6899999999999964 7899999999999999999973322 234679999999999999999999999999999999
Q ss_pred CCCCc---eee----------------------eeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccc----
Q psy14815 164 GEEDE---YEC----------------------AAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEAD---- 214 (479)
Q Consensus 164 ~~~~~---~~~----------------------~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---- 214 (479)
...+- ++. ..+..-|...|-|+.|- |+++++-+-++.|..|...+.+..
T Consensus 211 ~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~--gd~ilSkscenaI~~w~pgkl~e~~~~v 288 (385)
T KOG1034|consen 211 NVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF--GDFILSKSCENAIVCWKPGKLEESIHNV 288 (385)
T ss_pred ChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHH--hhheeecccCceEEEEecchhhhhhhcc
Confidence 83310 000 01223455666677775 689999999999999987322211
Q ss_pred ------eEeeeeecCCCccEEEEE--EccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccE
Q psy14815 215 ------WINFATLKSHTSTVWSLA--FDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTI 286 (479)
Q Consensus 215 ------~~~~~~~~~~~~~v~~~~--~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 286 (479)
...+..+.-....++-+. |+|-+++|+.|...|.|.+||++....... .+..+.. ....|
T Consensus 289 kp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~---------ttl~~s~---~~~tV 356 (385)
T KOG1034|consen 289 KPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKC---------TTLTHSK---SGSTV 356 (385)
T ss_pred CCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccC---------ceEEecc---cccee
Confidence 112223333344555554 466688999999999999999976554311 1111211 25689
Q ss_pred EEEEecCCCCeEEEEeCCCeEEEcccC
Q psy14815 287 YDISWCHLTDLIATACGDDAIRIFKEN 313 (479)
Q Consensus 287 ~~l~~~~~~~~l~~~~~dg~i~vw~~~ 313 (479)
.+.+|+.|+.+|+..++|++|.=||.-
T Consensus 357 RQ~sfS~dgs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 357 RQTSFSRDGSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred eeeeecccCcEEEEEeCCCcEEEEEee
Confidence 999999999999999999999988853
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.3e-21 Score=167.53 Aligned_cols=208 Identities=22% Similarity=0.395 Sum_probs=163.1
Q ss_pred ccccccceEEEEECCC-CCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 7 LKGHQGRVWNVSWNPQ-GTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~-~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
-.+|++.|.+++|+.. .+.||+||.|.+|++||+.++++..++
T Consensus 239 ~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~------------------------------------ 282 (463)
T KOG0270|consen 239 ASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSI------------------------------------ 282 (463)
T ss_pred cccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceeh------------------------------------
Confidence 3479999999999985 458999999999999999999987665
Q ss_pred ccccCCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEEe
Q psy14815 86 SDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vwd~ 163 (479)
..|.+.|.+++|+| ....|++|+.|++|.+.|.+.... .-...+ ..+.|-.+.|.| ....+++++.||.|+-+|+
T Consensus 283 -~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~-s~~~wk-~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~ 359 (463)
T KOG0270|consen 283 -THHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSN-SGKEWK-FDGEVEKVAWDPHSENSFFVSTDDGTVYYFDI 359 (463)
T ss_pred -hhcCCceeEEEecCCCceEEEeccccceEEeeeccCccc-cCceEE-eccceEEEEecCCCceeEEEecCCceEEeeec
Confidence 46899999999999 568999999999999999984220 111122 346799999998 4557888889999999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCC-EEE
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLA 241 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~ 241 (479)
|... +++.+++.|..+|+++++++. ..++++++.|+.|++|++....... +....-.-+...|.++.|+-. .++
T Consensus 360 R~~~--~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~--v~~~~~~~~rl~c~~~~~~~a~~la 435 (463)
T KOG0270|consen 360 RNPG--KPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKS--VKEHSFKLGRLHCFALDPDVAFTLA 435 (463)
T ss_pred CCCC--CceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcc--cccccccccceeecccCCCcceEEE
Confidence 9876 778889999999999999984 4689999999999999997655321 111111123356777777754 456
Q ss_pred EeeCCCeEEEEeccCC
Q psy14815 242 TCSDDATVKIWKEYKP 257 (479)
Q Consensus 242 s~~~dg~i~iwd~~~~ 257 (479)
.|+..+.+++||+...
T Consensus 436 ~GG~k~~~~vwd~~~~ 451 (463)
T KOG0270|consen 436 FGGEKAVLRVWDIFTN 451 (463)
T ss_pred ecCccceEEEeecccC
Confidence 7778888999998543
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.8e-20 Score=156.57 Aligned_cols=227 Identities=19% Similarity=0.267 Sum_probs=189.0
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCe-EEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCC
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ-FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 167 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~ 167 (479)
...+|+|.+|++|+..+|.+.....|.||.....+ ++..++++.|...|+.++|+|..+.|++++.|..-++|....+.
T Consensus 9 ~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~ 88 (361)
T KOG1523|consen 9 LLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGG 88 (361)
T ss_pred ccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCC
Confidence 35799999999999999999999999999998887 88899999999999999999999999999999999999997777
Q ss_pred ceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCC
Q psy14815 168 EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 247 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 247 (479)
.++....+..+....+++.|+|.++.+++|+.-..|.||-++..+.-|.....-+.+.+.|+++.|+|++-.|++|+.|+
T Consensus 89 ~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~ 168 (361)
T KOG1523|consen 89 TWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDG 168 (361)
T ss_pred eeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCc
Confidence 88888888889999999999999999999999999999998876644444444566788999999999999999999999
Q ss_pred eEEEEeccCCCC---CCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 248 TVKIWKEYKPGN---SAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 248 ~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
.++++...-... +...+-+...+-+.++..+.. ..+.+..+.|+|+|..|+-.+.|+.+.+-|.....
T Consensus 169 k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~-~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~ 239 (361)
T KOG1523|consen 169 KCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASS-SGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPS 239 (361)
T ss_pred ceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhcc-CCCceeeeEeCCCCCEeeEecCCCceEEeecCCCc
Confidence 999998643221 111111112222333444433 37899999999999999999999999999887764
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-20 Score=166.07 Aligned_cols=248 Identities=17% Similarity=0.213 Sum_probs=182.5
Q ss_pred cccCCcEEEEEECCCC--CEEEEEECCCeEEEEECCC--CeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEE
Q psy14815 87 DGHQRTIRETAWSPCG--NFIASASFDATTAVWDKRS--GQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVW 161 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~--~~l~t~~~dg~i~iwd~~~--~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vw 161 (479)
.-+.++|++++|+|.. +++++|...|.|-+||+.+ .....+..+..|..+|.++.|+| +...+++.+.||+|+.-
T Consensus 183 kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~ 262 (498)
T KOG4328|consen 183 KVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQ 262 (498)
T ss_pred EecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeee
Confidence 4578899999999954 5888999999999999952 22234567788999999999999 55689999999999999
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC-CEE
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SRL 240 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l 240 (479)
|++.... +.+..+......+.++.|+.+...++++..=|...+||++..+.. ...+.-|...|.+++++|.. .+|
T Consensus 263 D~~~~i~-e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~---~~~~~lh~kKI~sv~~NP~~p~~l 338 (498)
T KOG4328|consen 263 DFEGNIS-EEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSE---YENLRLHKKKITSVALNPVCPWFL 338 (498)
T ss_pred eecchhh-HHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCcc---chhhhhhhcccceeecCCCCchhe
Confidence 9987632 333333334556788889888888888888889999999987753 34456688899999999976 467
Q ss_pred EEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCC
Q psy14815 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSD 320 (479)
Q Consensus 241 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 320 (479)
+|++.|++.+|||++....... ..+.+ .. |...|.+..|||++..|++.+.|..|+|||..--.. .+
T Consensus 339 aT~s~D~T~kIWD~R~l~~K~s----------p~lst-~~-HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa-~~ 405 (498)
T KOG4328|consen 339 ATASLDQTAKIWDLRQLRGKAS----------PFLST-LP-HRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISA-KD 405 (498)
T ss_pred eecccCcceeeeehhhhcCCCC----------cceec-cc-ccceeeeeEEcCCCCceEeeccCCceEEeecccccc-cC
Confidence 9999999999999987654321 01222 23 478999999999988899999999999999852110 00
Q ss_pred ceeeEEEeccccccc----cceeEEEecCCCCCCCcccc
Q psy14815 321 MVSFDLVHTEHRAHN----QDVNCVAWNPVVPEPQKTNL 355 (479)
Q Consensus 321 ~~~~~~~~~~~~~h~----~~v~~~~~sp~~~~l~~~~~ 355 (479)
. ....+...+. -.....+|.|+..+++.+.+
T Consensus 406 ~----p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~ 440 (498)
T KOG4328|consen 406 E----PLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRY 440 (498)
T ss_pred C----ccceeeccCcccccccchhheeCCCccEEEEecc
Confidence 1 1222211111 12334578888877777654
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-20 Score=171.04 Aligned_cols=262 Identities=15% Similarity=0.207 Sum_probs=188.3
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
..++..|.+.|+.++|.|....|++++.||++++|+++....- ......+.
T Consensus 287 k~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s-----------------------------~~~~~epi 337 (577)
T KOG0642|consen 287 KFTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKS-----------------------------AEKDVEPI 337 (577)
T ss_pred eeeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCc-----------------------------cccceeee
Confidence 3478899999999999999999999999999999998431110 11112223
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCe--------EEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ--------FECNATLEGHENEVKSVTWSKNGQFLATCSRD 155 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~--------~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d 155 (479)
..+.+|.++|.|+++.+++..+++|+-||+|+.|++.... ......+.+|.+.|+.+++++....|++++.|
T Consensus 338 ~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~D 417 (577)
T KOG0642|consen 338 LTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSD 417 (577)
T ss_pred EEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCC
Confidence 3357999999999999999999999999999999664211 12345678999999999999999999999999
Q ss_pred CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCC-CEEEEEEcCCcEEEEecCCcccceEeeeeec-------CCCcc
Q psy14815 156 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFATLK-------SHTST 227 (479)
Q Consensus 156 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-------~~~~~ 227 (479)
|+++.|+...... ........|. .-.++.+-... ...++...-+.-.+++...... +..+. .....
T Consensus 418 gTvr~w~~~~~~~-~~f~~~~e~g-~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~----~~~~~s~~~~~~~~~~~ 491 (577)
T KOG0642|consen 418 GTVRLWEPTEESP-CTFGEPKEHG-YPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSD----LLIFESSASPGPRRYPQ 491 (577)
T ss_pred ceEEeeccCCcCc-cccCCccccC-CcceEeeccchhHhhhhhcccccccchhhhhhhh----eeeccccCCCcccccCc
Confidence 9999999877643 1122222222 23445554322 2222222223333333332221 11111 12245
Q ss_pred EEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeE
Q psy14815 228 VWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAI 307 (479)
Q Consensus 228 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i 307 (479)
+..+.++|.....+++..|+.|+++|.. ++..+.....| ...++++++.|+|.+|++++.|+.+
T Consensus 492 in~vVs~~~~~~~~~~hed~~Ir~~dn~---------------~~~~l~s~~a~-~~svtslai~~ng~~l~s~s~d~sv 555 (577)
T KOG0642|consen 492 INKVVSHPTADITFTAHEDRSIRFFDNK---------------TGKILHSMVAH-KDSVTSLAIDPNGPYLMSGSHDGSV 555 (577)
T ss_pred cceEEecCCCCeeEecccCCceeccccc---------------ccccchheeec-cceecceeecCCCceEEeecCCcee
Confidence 7788899999999999999999999973 44556666665 7899999999999999999999999
Q ss_pred EEcccCCCC
Q psy14815 308 RIFKENPEA 316 (479)
Q Consensus 308 ~vw~~~~~~ 316 (479)
++|.+....
T Consensus 556 ~l~kld~k~ 564 (577)
T KOG0642|consen 556 RLWKLDVKT 564 (577)
T ss_pred ehhhccchh
Confidence 999997765
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-20 Score=167.35 Aligned_cols=186 Identities=17% Similarity=0.268 Sum_probs=151.2
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCC-CCcEEEEEEcCCCC-EEEEEeCCCcEEEEEe
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGH-ENEVKSVTWSKNGQ-FLATCSRDKSVWVWEV 163 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~-~l~~~~~dg~i~vwd~ 163 (479)
..+|.+.|+++.++....+||+++..|.|.|..+.++. ....|... ...|.-+.|++..+ +|.+++.+|.|.+||+
T Consensus 117 lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~--~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv 194 (673)
T KOG4378|consen 117 LKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQ--KTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDV 194 (673)
T ss_pred ccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCc--cccceecCCCCeEEEeecccccceeeEeeccCCeEEEEec
Confidence 36899999999999999999999999999999999886 34444433 34566899999555 6778899999999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
.... ....-...|..+...++|+| +..+|++.+.|..|.+||.+.... . ..-....+...++|+++|.+|+.
T Consensus 195 ~g~s--p~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s----~-~~l~y~~Plstvaf~~~G~~L~a 267 (673)
T KOG4378|consen 195 QGMS--PIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQAS----T-DRLTYSHPLSTVAFSECGTYLCA 267 (673)
T ss_pred cCCC--cccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccc----c-ceeeecCCcceeeecCCceEEEe
Confidence 8864 34455678999999999999 557889999999999999986543 2 22234567899999999999999
Q ss_pred eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCC
Q psy14815 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 295 (479)
Q Consensus 243 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~ 295 (479)
|+..|.|..||++.... ++.++..| ...|++++|-|.-
T Consensus 268 G~s~G~~i~YD~R~~k~--------------Pv~v~sah-~~sVt~vafq~s~ 305 (673)
T KOG4378|consen 268 GNSKGELIAYDMRSTKA--------------PVAVRSAH-DASVTRVAFQPSP 305 (673)
T ss_pred ecCCceEEEEecccCCC--------------CceEeeec-ccceeEEEeeecc
Confidence 99999999999976554 35666666 7789999998764
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-19 Score=158.78 Aligned_cols=271 Identities=21% Similarity=0.345 Sum_probs=190.8
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+..|..|...|+++.|+|+|++||+|+++|.|.+|-...-... +. +. ..+...+.+...
T Consensus 58 ~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~------~~---------d~-----e~~~~ke~w~v~- 116 (434)
T KOG1009|consen 58 LSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIF------DA---------DT-----EADLNKEKWVVK- 116 (434)
T ss_pred eecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCc------cc---------cc-----hhhhCccceEEE-
Confidence 4578899999999999999999999999999999975431100 00 00 000001222222
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
....+|.+.|..++|+|++.++++++.|+.+++||+..|+ ....+..|...|..++|.|-++++++-+.|...+.+.+
T Consensus 117 k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~--l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~ 194 (434)
T KOG1009|consen 117 KVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQ--LLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSA 194 (434)
T ss_pred EEecccccchhhhhccCCCceeeeeeccceEEEEEeccce--eEeeccccccccceeecchhhhhhhhhccCcccceeee
Confidence 2346799999999999999999999999999999999997 66788899999999999999999999999988777777
Q ss_pred CCCCceeeee--ee---e-----------ccc----cceeEEEEecCCCEEEEEEc----CCc-----EEEEecCCcccc
Q psy14815 164 GEEDEYECAA--VI---N-----------AHI----QDVKKVRFHPFDNILASASY----DDT-----VKLFKEDKAEAD 214 (479)
Q Consensus 164 ~~~~~~~~~~--~~---~-----------~~~----~~v~~l~~~~~~~~l~~~~~----dg~-----i~i~d~~~~~~~ 214 (479)
...+...... .. . -|. .-.+.++|+|+|.+|++... .+. .++|+....+
T Consensus 195 ~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~-- 272 (434)
T KOG1009|consen 195 KLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLK-- 272 (434)
T ss_pred eeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEcccceeeeCCceeeceeEeecccccc--
Confidence 6543222211 00 0 011 12456789999999987642 222 3445433221
Q ss_pred eEeeeeecCCCccEEEEEEcc------------------CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEE
Q psy14815 215 WINFATLKSHTSTVWSLAFDR------------------IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 276 (479)
Q Consensus 215 ~~~~~~~~~~~~~v~~~~~~~------------------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 276 (479)
++...+.....++..+.|+| .+..++.++ ...|++||... ..++.
T Consensus 273 -rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt-~~svyvydtq~---------------~~P~~ 335 (434)
T KOG1009|consen 273 -RPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIAT-KNSVYVYDTQT---------------LEPLA 335 (434)
T ss_pred -CceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEee-cceEEEecccc---------------ccceE
Confidence 34444555555555555544 223345555 45799999743 34566
Q ss_pred EEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 277 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 277 ~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
...+-|-..|++++|+++|.+|+..|.||...+-.++..+
T Consensus 336 ~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~e 375 (434)
T KOG1009|consen 336 VVDNIHYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPWE 375 (434)
T ss_pred EEeeeeeeeecceeecCCCcEEEEeccCCceEEEEEcchh
Confidence 6666668899999999999999999999998888777765
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.1e-20 Score=159.62 Aligned_cols=214 Identities=23% Similarity=0.403 Sum_probs=165.9
Q ss_pred cccccccceEEEEECC-CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEE
Q psy14815 6 TLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAI 84 (479)
Q Consensus 6 ~l~~h~~~V~~l~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~ 84 (479)
.+.||+++|..++|+| +...||+||.|.+|.||.+..+.....+ .....
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~l------------------------------tepvv 125 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDL------------------------------TEPVV 125 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCc------------------------------ccceE
Confidence 5679999999999999 6678999999999999998765544332 12233
Q ss_pred eccccCCcEEEEEECCC-CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 85 LSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
.+.+|...|--++|+|. .+.|++++.|.+|.+||+.++. ....+. |.+.|++++|+.||.+|++++.|..|||||.
T Consensus 126 ~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tge--ali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dp 202 (472)
T KOG0303|consen 126 ELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGE--ALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDP 202 (472)
T ss_pred EEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCc--eeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcC
Confidence 45799999999999995 4789999999999999999996 555666 9999999999999999999999999999999
Q ss_pred CCCCceeeeeeeeccccc-eeEEEEecCCCEEEEEE---cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE
Q psy14815 164 GEEDEYECAAVINAHIQD-VKKVRFHPFDNILASAS---YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~-v~~l~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
+.+ ..+..-.+|.+. -....|-.++.++-+|. .+..+-+||....+.. .....+. .++.|.---|.++.+.
T Consensus 203 r~~---~~v~e~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP-~~~~elD-tSnGvl~PFyD~dt~i 277 (472)
T KOG0303|consen 203 RRG---TVVSEGVAHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEP-IALQELD-TSNGVLLPFYDPDTSI 277 (472)
T ss_pred CCC---cEeeecccccCCCcceeEEeccCceeeeccccccccceeccCcccccCc-ceeEEec-cCCceEEeeecCCCCE
Confidence 998 444444566542 33456777888554443 4678999998765532 2334444 3455666678999888
Q ss_pred EEEee-CCCeEEEEeccCC
Q psy14815 240 LATCS-DDATVKIWKEYKP 257 (479)
Q Consensus 240 l~s~~-~dg~i~iwd~~~~ 257 (479)
++.++ .|+.||.|.+...
T Consensus 278 vYl~GKGD~~IRYyEit~d 296 (472)
T KOG0303|consen 278 VYLCGKGDSSIRYFEITNE 296 (472)
T ss_pred EEEEecCCcceEEEEecCC
Confidence 86554 7999999998544
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=3e-19 Score=149.76 Aligned_cols=242 Identities=19% Similarity=0.300 Sum_probs=179.4
Q ss_pred cccCCcEEEEEECCCC-----CEEEEEECCCeEEEEECCC--CeEEEeEEE-----eCCCCcEEEEEEcC-CCCEEEEEe
Q psy14815 87 DGHQRTIRETAWSPCG-----NFIASASFDATTAVWDKRS--GQFECNATL-----EGHENEVKSVTWSK-NGQFLATCS 153 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~-----~~l~t~~~dg~i~iwd~~~--~~~~~~~~~-----~~~~~~v~~l~~~~-~~~~l~~~~ 153 (479)
..|.-+++.+.|.|+. ++|||++ ..+++|.+.. .+..+...+ ..+..++++..|+. +.+++.+.+
T Consensus 93 fd~~YP~tK~~wiPd~~g~~pdlLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSS 170 (364)
T KOG0290|consen 93 FDHPYPVTKLMWIPDSKGVYPDLLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSS 170 (364)
T ss_pred CCCCCCccceEecCCccccCcchhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeec
Confidence 5788999999999976 4667665 4799999873 332222222 23567899999997 888999999
Q ss_pred CCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCC-CEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEE
Q psy14815 154 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLA 232 (479)
Q Consensus 154 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 232 (479)
-|-+..|||++.+.......++-.|...|..++|...+ +.+++.+.||.||+||++..+-. ..+.+-.....+...++
T Consensus 171 iDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHS-TIIYE~p~~~~pLlRLs 249 (364)
T KOG0290|consen 171 IDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHS-TIIYEDPSPSTPLLRLS 249 (364)
T ss_pred ccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccc-eEEecCCCCCCcceeec
Confidence 99999999999874334466788999999999999855 68999999999999999976531 22333333356788999
Q ss_pred EccCC-CEEEEeeCC-CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCC-CCeEEEEeCCCeEEE
Q psy14815 233 FDRIG-SRLATCSDD-ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL-TDLIATACGDDAIRI 309 (479)
Q Consensus 233 ~~~~~-~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~-~~~l~~~~~dg~i~v 309 (479)
|++.. +++++-..| ..|.|-|++.+.. ++.++++| ...|+.++|.|. ...|++++.|..+-+
T Consensus 250 wnkqDpnymATf~~dS~~V~iLDiR~P~t--------------pva~L~~H-~a~VNgIaWaPhS~~hictaGDD~qali 314 (364)
T KOG0290|consen 250 WNKQDPNYMATFAMDSNKVVILDIRVPCT--------------PVARLRNH-QASVNGIAWAPHSSSHICTAGDDCQALI 314 (364)
T ss_pred cCcCCchHHhhhhcCCceEEEEEecCCCc--------------ceehhhcC-cccccceEecCCCCceeeecCCcceEEE
Confidence 98754 667776655 4699999987654 47888997 889999999996 458999999999999
Q ss_pred cccCCCCCCCCceeeEEEeccccccccceeEEEecCCC-CCCC
Q psy14815 310 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV-PEPQ 351 (479)
Q Consensus 310 w~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~-~~l~ 351 (479)
||+...-..... ..+.. ..-.+.|+.+.|+|.. .+++
T Consensus 315 WDl~q~~~~~~~---dPila--y~a~~EVNqi~Ws~~~~Dwia 352 (364)
T KOG0290|consen 315 WDLQQMPRENGE---DPILA--YTAGGEVNQIQWSSSQPDWIA 352 (364)
T ss_pred EecccccccCCC---Cchhh--hhccceeeeeeecccCCCEEE
Confidence 999875421100 01111 1245689999999754 3443
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.3e-19 Score=174.35 Aligned_cols=294 Identities=17% Similarity=0.191 Sum_probs=209.6
Q ss_pred cccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC---------------CccceEEEeecCCcEEEecC
Q psy14815 8 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL---------------PVETSLRQLVEDKNIRLWGK 72 (479)
Q Consensus 8 ~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~i~~w~~ 72 (479)
.+....-..+.|+|-...++++...-+|++||.+.++.+..|... .+...+++++.||.|++|+-
T Consensus 1061 ~~n~~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~ 1140 (1387)
T KOG1517|consen 1061 TGNNQPPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKD 1140 (1387)
T ss_pred hcCCCCCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEecc
Confidence 344456677889998889999987778999999998887776543 33456788899999999976
Q ss_pred CCCC-CceeeeE------EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe-CCCCcEEEEEEcC
Q psy14815 73 ESFG-NKFTAKA------ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE-GHENEVKSVTWSK 144 (479)
Q Consensus 73 ~~~~-~~~~~~~------~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~~~ 144 (479)
-... .+..... -...+..+.=.-++|.....+|+++|.-..|+|||....+ ....+. +....|+++.-+.
T Consensus 1141 y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~--~~~diP~~s~t~vTaLS~~~ 1218 (1387)
T KOG1517|consen 1141 YADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQ--VVADIPYGSSTLVTALSADL 1218 (1387)
T ss_pred cccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccce--eEeecccCCCccceeecccc
Confidence 5332 1111111 1111222222556788766677777667899999998775 333332 3445677776544
Q ss_pred -CCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccc--eeEEEEecCCC-EEEEEEcCCcEEEEecCCcccceEeeee
Q psy14815 145 -NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD--VKKVRFHPFDN-ILASASYDDTVKLFKEDKAEADWINFAT 220 (479)
Q Consensus 145 -~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~--v~~l~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 220 (479)
.|+.+++|..||.|++||.+....-..+.....|... |..+.+.++|- .|++|+.+|.|++||++.... ....+
T Consensus 1219 ~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~--e~~~~ 1296 (1387)
T KOG1517|consen 1219 VHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSK--ETFLT 1296 (1387)
T ss_pred cCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcc--cccce
Confidence 5789999999999999999987654566777788877 99999998774 599999999999999997421 11222
Q ss_pred ecCC---CccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCe
Q psy14815 221 LKSH---TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDL 297 (479)
Q Consensus 221 ~~~~---~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~ 297 (479)
...| .+..+++..+++...+++|+. +.|+||++........ +.-..+-+.....+.+++|+|-.-+
T Consensus 1297 iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l~~~----------k~n~~F~~q~~gs~scL~FHP~~~l 1365 (1387)
T KOG1517|consen 1297 IVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQLNII----------KYNPGFMGQRIGSVSCLAFHPHRLL 1365 (1387)
T ss_pred eeeccccCccceeeeeccCCCeeeecCc-ceEEEEecChhhhccc----------ccCcccccCcCCCcceeeecchhHh
Confidence 3333 235899999999999999998 9999999854332111 1112233334567899999999999
Q ss_pred EEEEeCCCeEEEcccCCCC
Q psy14815 298 IATACGDDAIRIFKENPEA 316 (479)
Q Consensus 298 l~~~~~dg~i~vw~~~~~~ 316 (479)
+|+|+.|.+|.||......
T Consensus 1366 lAaG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1366 LAAGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred hhhccCCceEEEeecCCcC
Confidence 9999999999999876543
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.5e-20 Score=165.70 Aligned_cols=307 Identities=17% Similarity=0.280 Sum_probs=227.3
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
.+...|.+|.+.|+.+.|+..|..|++||.|..|.+||+.++.....+.
T Consensus 133 ~l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~------------------------------- 181 (559)
T KOG1334|consen 133 RLQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFE------------------------------- 181 (559)
T ss_pred hhhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccc-------------------------------
Confidence 4567789999999999999999999999999999999998877765552
Q ss_pred eEEeccccCCcEEEEEECC--CCCEEEEEECCCeEEEEECC-CCeEEEeEEEeCCCCcEEEEEEcCC-CCEEEEEeCCCc
Q psy14815 82 KAILSDGHQRTIRETAWSP--CGNFIASASFDATTAVWDKR-SGQFECNATLEGHENEVKSVTWSKN-GQFLATCSRDKS 157 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~--~~~~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~~~dg~ 157 (479)
.+|...|....|-| +...+++++.||.+++=.+. ++..+....+..|.++|..++.-|+ ...|.+++.|+.
T Consensus 182 -----SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~ 256 (559)
T KOG1334|consen 182 -----SGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAV 256 (559)
T ss_pred -----cccccchhhhhccCCCCCcCceeccccCceeeeeeccccceecceecccccCccceeeecCCCCCcccccccccc
Confidence 58888999889988 45789999999999998754 4444445667789999999999984 567999999999
Q ss_pred EEEEEeCCCCceeeeeeeecccc---ceeEEEEecCC-CEEEEEEcCCcEEEEecCCcccceE--eeeee------cCCC
Q psy14815 158 VWVWEVGEEDEYECAAVINAHIQ---DVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWI--NFATL------KSHT 225 (479)
Q Consensus 158 i~vwd~~~~~~~~~~~~~~~~~~---~v~~l~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~------~~~~ 225 (479)
+.-+|++....-..+.....+.. ....++..|.. ..+++|+.|..+++||.+....... .+.++ ....
T Consensus 257 v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~ 336 (559)
T KOG1334|consen 257 VFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDP 336 (559)
T ss_pred eeeeeeccCCccceeeeeccCCccceeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCc
Confidence 99999998754333332223333 46788888854 5899999999999999886432100 01111 1234
Q ss_pred ccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccc-cccEEEEEe-cCCCCeEEEEeC
Q psy14815 226 STVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-GRTIYDISW-CHLTDLIATACG 303 (479)
Q Consensus 226 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~l~~-~~~~~~l~~~~~ 303 (479)
..|++++|+.++.-|++.-.|-.|+++.-....-....+.. ....-..+.+++|. ...|..+-| .|...|+++||.
T Consensus 337 v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s--~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSD 414 (559)
T KOG1334|consen 337 VNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSS--PREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSD 414 (559)
T ss_pred ccceeEEecCCccceeeeecccceEEeccccccCCCCCCCc--chhhccchhhcccccccccceeeeccCccceEEecCc
Confidence 56899999988888888888888999953322221111111 11111223377773 234666654 588899999999
Q ss_pred CCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccccc
Q psy14815 304 DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTNLT 356 (479)
Q Consensus 304 dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~~ 356 (479)
=|.|.||+-.+++ +..+..+....|+|+.-+|.-+.||+.++.
T Consensus 415 CGhIFiW~K~t~e----------ii~~MegDr~VVNCLEpHP~~PvLAsSGid 457 (559)
T KOG1334|consen 415 CGHIFIWDKKTGE----------IIRFMEGDRHVVNCLEPHPHLPVLASSGID 457 (559)
T ss_pred cceEEEEecchhH----------HHHHhhcccceEeccCCCCCCchhhccCCc
Confidence 9999999999987 555566766799999999999999998753
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-19 Score=165.41 Aligned_cols=248 Identities=23% Similarity=0.340 Sum_probs=178.3
Q ss_pred eeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCC-------------
Q psy14815 80 TAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG------------- 146 (479)
Q Consensus 80 ~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~------------- 146 (479)
........+|.+.|.++...|.|.+|++|+.||+|+||.+.++. ++..+. ..+.|.|++|+|.+
T Consensus 390 t~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgR--cvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~~ 466 (733)
T KOG0650|consen 390 TRCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGR--CVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGECV 466 (733)
T ss_pred ceeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecce--EEEEEe-ecceeEEEEecCCCCceeEEEEecCce
Confidence 34455678999999999999999999999999999999999997 444333 22356666666643
Q ss_pred -------------------------------------------------------------------CEEEEEeCC---C
Q psy14815 147 -------------------------------------------------------------------QFLATCSRD---K 156 (479)
Q Consensus 147 -------------------------------------------------------------------~~l~~~~~d---g 156 (479)
.+|++...+ .
T Consensus 467 ~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~ 546 (733)
T KOG0650|consen 467 LIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNK 546 (733)
T ss_pred EEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcc
Confidence 333332221 1
Q ss_pred cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC
Q psy14815 157 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 236 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 236 (479)
.|.|.++.... ....+....+.+.++.|+|...+|++++. ..|++||+..... +..+......|.+++.+|.
T Consensus 547 ~VliHQLSK~~---sQ~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqel----vKkL~tg~kwiS~msihp~ 618 (733)
T KOG0650|consen 547 SVLIHQLSKRK---SQSPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQEL----VKKLLTGSKWISSMSIHPN 618 (733)
T ss_pred eEEEEeccccc---ccCchhhcCCceeEEEecCCCceEEEEec-cceEEEehhHHHH----HHHHhcCCeeeeeeeecCC
Confidence 23333332221 11122234456889999999888888875 5799999986543 6666677788999999999
Q ss_pred CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 237 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 237 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
|..|+.|+.|+.+..+|+.... ++.+++..| ...+++++|++.-.++++|+.||++.|+.-.--.
T Consensus 619 GDnli~gs~d~k~~WfDldlss--------------kPyk~lr~H-~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~ 683 (733)
T KOG0650|consen 619 GDNLILGSYDKKMCWFDLDLSS--------------KPYKTLRLH-EKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYN 683 (733)
T ss_pred CCeEEEecCCCeeEEEEcccCc--------------chhHHhhhh-hhhhhhhhhccccceeeeecCCCcEEEEeeeeeh
Confidence 9999999999999999985543 335566665 8899999999999999999999999998654433
Q ss_pred CCCCceeeEEEeccccccccc----eeEEEecCCCCCCCccc
Q psy14815 317 GDSDMVSFDLVHTEHRAHNQD----VNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 317 ~~~~~~~~~~~~~~~~~h~~~----v~~~~~sp~~~~l~~~~ 354 (479)
.-.+.+..- ....+.+|... |..+.|+|..++|.+++
T Consensus 684 Dl~qnpliV-PlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAG 724 (733)
T KOG0650|consen 684 DLLQNPLIV-PLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAG 724 (733)
T ss_pred hhhcCCceE-eeeeccCceeecccceEeecccCCCceEEecC
Confidence 222222222 23344688765 88999999999996655
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.3e-19 Score=152.53 Aligned_cols=239 Identities=20% Similarity=0.302 Sum_probs=175.9
Q ss_pred cceEEEEEC-------CCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEE
Q psy14815 12 GRVWNVSWN-------PQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAI 84 (479)
Q Consensus 12 ~~V~~l~~s-------~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~ 84 (479)
..|..-+|- |+..++++.+.+.-|++||.-+|+...++..- |.
T Consensus 105 ~tvydy~wYs~M~s~qP~t~l~a~ssr~~PIh~wdaftG~lraSy~~y------------------dh------------ 154 (406)
T KOG2919|consen 105 ETVYDYCWYSRMKSDQPSTNLFAVSSRDQPIHLWDAFTGKLRASYRAY------------------DH------------ 154 (406)
T ss_pred CEEEEEEeeeccccCCCccceeeeccccCceeeeeccccccccchhhh------------------hh------------
Confidence 446666664 56677888888888888888777766554321 00
Q ss_pred eccccCCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCCeEEEeEEEe-----CCCCcEEEEEEcC-CCCEEEEEeCCCc
Q psy14815 85 LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDK-RSGQFECNATLE-----GHENEVKSVTWSK-NGQFLATCSRDKS 157 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~-----~~~~~v~~l~~~~-~~~~l~~~~~dg~ 157 (479)
...-....+++|+|||.+|+.|- ...|+++|+ +.|......... +..+-+.+++|+| +...+++|+....
T Consensus 155 --~de~taAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~ 231 (406)
T KOG2919|consen 155 --QDEYTAAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQR 231 (406)
T ss_pred --HHhhhhheeEEecCCCCeEeecc-cceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccce
Confidence 11223556899999999998775 589999999 555422222222 2356789999999 6668999999888
Q ss_pred EEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc-CCcEEEEecCCcccceEeeeeecCCCc-cEEEEEE--
Q psy14815 158 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWINFATLKSHTS-TVWSLAF-- 233 (479)
Q Consensus 158 i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~-~v~~~~~-- 233 (479)
+-+|.-... .++..+.+|.+.|+.++|.++|+.|++|.. +-.|..||++.... ++..+..|.. .-..|.|
T Consensus 232 ~giy~~~~~---~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~---pv~~L~rhv~~TNQRI~FDl 305 (406)
T KOG2919|consen 232 VGIYNDDGR---RPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRD---PVYALERHVGDTNQRILFDL 305 (406)
T ss_pred eeeEecCCC---CceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccc---hhhhhhhhccCccceEEEec
Confidence 888887766 566777899999999999999999999985 67899999997553 5666666655 2334444
Q ss_pred ccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC
Q psy14815 234 DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 304 (479)
Q Consensus 234 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d 304 (479)
.|++++|++|+.||.|++||+....+. +..+.. +...++.++++|--.++++++..
T Consensus 306 d~~~~~LasG~tdG~V~vwdlk~~gn~--------------~sv~~~-~sd~vNgvslnP~mpilatssGq 361 (406)
T KOG2919|consen 306 DPKGEILASGDTDGSVRVWDLKDLGNE--------------VSVTGN-YSDTVNGVSLNPIMPILATSSGQ 361 (406)
T ss_pred CCCCceeeccCCCccEEEEecCCCCCc--------------cccccc-ccccccceecCcccceeeeccCc
Confidence 688999999999999999999775542 222333 36789999999998889888765
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.2e-21 Score=181.81 Aligned_cols=271 Identities=18% Similarity=0.261 Sum_probs=204.6
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
+.++.|.||.+.|+|+.|...|.+++||++|..++||.++++.++...
T Consensus 181 k~ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~-------------------------------- 228 (1113)
T KOG0644|consen 181 KNIKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASC-------------------------------- 228 (1113)
T ss_pred HHHHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccC--------------------------------
Confidence 456789999999999999999999999999999999999988887665
Q ss_pred eEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14815 82 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vw 161 (479)
.||...|+.++.+.+..++++++.|..|++|.+..+. ++..+.+|++.|++++|+|-. +.+.||++++|
T Consensus 229 -----rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~--pvsvLrghtgavtaiafsP~~----sss~dgt~~~w 297 (1113)
T KOG0644|consen 229 -----RGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGA--PVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIW 297 (1113)
T ss_pred -----CCCccccchhccchhhhhhhhcccCceEEEEecCCCc--hHHHHhccccceeeeccCccc----cCCCCCceEec
Confidence 6899999999999999999999999999999999996 778889999999999999953 77899999999
Q ss_pred EeCCCCceeeeeeee-ccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC-CE
Q psy14815 162 EVGEEDEYECAAVIN-AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SR 239 (479)
Q Consensus 162 d~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~ 239 (479)
|.+-......-..+. ....-+-++.|...+..+++|+.|+.-..|.+... ..+...+.-+.++.+- .+
T Consensus 298 d~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l----------~~~~~~lif~t~ssd~~~~ 367 (1113)
T KOG0644|consen 298 DARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQL----------AWRSNLLIFVTRSSDLSSI 367 (1113)
T ss_pred cccccccccCCCCCCcccccceeeeeccccccccccccCCcccccchhhHh----------hhhccceEEEecccccccc
Confidence 998211000000111 11244667778888888999999999888876532 1222223223333222 35
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC-eEEEEeCCCeEEEcccCCCCCC
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGD 318 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~~dg~i~vw~~~~~~~~ 318 (479)
.+++-.+-.+++|++..+ ...+.+.+| ...++.+.++|-.. ...+++.||+..|||+-.+.
T Consensus 368 ~~~ar~~~~~~vwnl~~g---------------~l~H~l~gh-sd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~-- 429 (1113)
T KOG0644|consen 368 VVTARNDHRLCVWNLYTG---------------QLLHNLMGH-SDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGI-- 429 (1113)
T ss_pred ceeeeeeeEeeeeecccc---------------hhhhhhccc-ccceeeeeecCCCcHhhhhccCCCceEeeecccCC--
Confidence 566777888999998544 334556665 77899999999655 55678999999999998876
Q ss_pred CCceeeEEEeccccccccceeEEEecCCCCCCC
Q psy14815 319 SDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 319 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 351 (479)
.......+| +.+...+||+||..++
T Consensus 430 -------pik~y~~gh-~kl~d~kFSqdgts~~ 454 (1113)
T KOG0644|consen 430 -------PIKHYFIGH-GKLVDGKFSQDGTSIA 454 (1113)
T ss_pred -------cceeeeccc-ceeeccccCCCCceEe
Confidence 122222344 4566778999987653
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.2e-17 Score=157.75 Aligned_cols=301 Identities=28% Similarity=0.484 Sum_probs=222.0
Q ss_pred cccccccceEEEEECCCCCeEEEeeCCCcEEEEeccccc-ccccccC------------CCccc-eEEEeec-CCcEEEe
Q psy14815 6 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIRE-PYEKLHG------------LPVET-SLRQLVE-DKNIRLW 70 (479)
Q Consensus 6 ~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~-~~~~~~~------------~~~~~-~~~~~~~-~~~i~~w 70 (479)
.+.+|...|.++.+.+.+..++.++.|+.+.+|+...+. ....+.. .+... .+..... ++.+.+|
T Consensus 60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 139 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLW 139 (466)
T ss_pred eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEE
Confidence 467899999999999999999999999999999987775 3333333 12222 2233233 7889999
Q ss_pred cCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEEC-CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCC-E
Q psy14815 71 GKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF-DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ-F 148 (479)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~ 148 (479)
+... ..........|...|..++|+|++..+++++. |+.+++|+...+. ....+..|...|.+++|+|++. .
T Consensus 140 ~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~ 213 (466)
T COG2319 140 DLST----PGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGK--PLSTLAGHTDPVSSLAFSPDGGLL 213 (466)
T ss_pred EecC----CCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCc--eEEeeccCCCceEEEEEcCCcceE
Confidence 8873 11222334689999999999999998888885 9999999999864 5677777999999999999988 5
Q ss_pred EEEEeCCCcEEEEEeCCCCceeeee-eeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCcc
Q psy14815 149 LATCSRDKSVWVWEVGEEDEYECAA-VINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST 227 (479)
Q Consensus 149 l~~~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 227 (479)
+++++.|+.+++||.... .... .+..|.... ...|+|++..+++++.|+.+++|+.+.... ....+..|...
T Consensus 214 ~~~~~~d~~i~~wd~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~~~~~~~~~ 286 (466)
T COG2319 214 IASGSSDGTIRLWDLSTG---KLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSS---LLRTLSGHSSS 286 (466)
T ss_pred EEEecCCCcEEEEECCCC---cEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCc---EEEEEecCCcc
Confidence 555589999999988854 3333 566777664 348999998899999999999999986653 12223678899
Q ss_pred EEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEE--eccccccEEEEEecCCCCeEEEE-eCC
Q psy14815 228 VWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL--SGHHGRTIYDISWCHLTDLIATA-CGD 304 (479)
Q Consensus 228 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~l~~~~~~~~l~~~-~~d 304 (479)
+.++.|+|++..+++++.|+.+++||...... .... ..| ...+..+.|.+++..++.+ ..|
T Consensus 287 v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d 350 (466)
T COG2319 287 VLSVAFSPDGKLLASGSSDGTVRLWDLETGKL---------------LSSLTLKGH-EGPVSSLSFSPDGSLLVSGGSDD 350 (466)
T ss_pred EEEEEECCCCCEEEEeeCCCcEEEEEcCCCce---------------EEEeeeccc-CCceEEEEECCCCCEEEEeecCC
Confidence 99999999888888899998899998754432 2222 244 5578999994332455555 678
Q ss_pred CeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCC
Q psy14815 305 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347 (479)
Q Consensus 305 g~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~ 347 (479)
+.+.+|+..... ...... ....+..+.+++ .
T Consensus 351 ~~~~~~~~~~~~---------~~~~~~--~~~~~~~~~~~~-~ 381 (466)
T COG2319 351 GTIRLWDLRTGK---------PLKTLE--GHSNVLSVSFSP-D 381 (466)
T ss_pred CcEEeeecCCCc---------eeEEec--CCceEEEEEECC-C
Confidence 999999988764 111111 111277888888 5
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.9e-19 Score=164.13 Aligned_cols=261 Identities=15% Similarity=0.222 Sum_probs=196.8
Q ss_pred ceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCc
Q psy14815 13 RVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRT 92 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 92 (479)
.|..++|-|||..|+.+. +..+.+||...|..+.++ .+|.+.
T Consensus 14 ci~d~afkPDGsqL~lAA-g~rlliyD~ndG~llqtL-------------------------------------KgHKDt 55 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA-GSRLLVYDTSDGTLLQPL-------------------------------------KGHKDT 55 (1081)
T ss_pred chheeEECCCCceEEEec-CCEEEEEeCCCccccccc-------------------------------------ccccce
Confidence 899999999999888775 447999999988887766 689999
Q ss_pred EEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeee
Q psy14815 93 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA 172 (479)
Q Consensus 93 v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 172 (479)
|.|++|+.||+.+++|+.|..|.+|+..-. -+..+ .|.+.|.|+.|+|-...|++++.. ..-+|.......
T Consensus 56 VycVAys~dGkrFASG~aDK~VI~W~~klE---G~LkY-SH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~V---- 126 (1081)
T KOG1538|consen 56 VYCVAYAKDGKRFASGSADKSVIIWTSKLE---GILKY-SHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQKSV---- 126 (1081)
T ss_pred EEEEEEccCCceeccCCCceeEEEeccccc---ceeee-ccCCeeeEeecCchHHHhhhcchh-hccccChhhhhH----
Confidence 999999999999999999999999986432 23333 499999999999998899998763 456787765421
Q ss_pred eeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC-----CEEEEeeCCC
Q psy14815 173 AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-----SRLATCSDDA 247 (479)
Q Consensus 173 ~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~~l~s~~~dg 247 (479)
.. ......+.+++|..||.+++.|-.+|+|.+-+-..... ..+....+..++|++++|+|.. ..++......
T Consensus 127 ~K-~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek--~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~q 203 (1081)
T KOG1538|consen 127 SK-HKSSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEK--VKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQ 203 (1081)
T ss_pred Hh-hhhheeEEEeeecCCCcEEEEeccCceEEeecCCCCcc--eEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccc
Confidence 11 11235678899999999999999999999985443221 2233344577899999999964 4677777888
Q ss_pred eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEE
Q psy14815 248 TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLV 327 (479)
Q Consensus 248 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~ 327 (479)
++.+|.+... .+..-+. -+....++.+.++|.+++.|+.|+.+++|-.+.- .+
T Consensus 204 TLSFy~LsG~----------------~Igk~r~-L~FdP~CisYf~NGEy~LiGGsdk~L~~fTR~Gv----------rL 256 (1081)
T KOG1538|consen 204 TLSFYQLSGK----------------QIGKDRA-LNFDPCCISYFTNGEYILLGGSDKQLSLFTRDGV----------RL 256 (1081)
T ss_pred eeEEEEecce----------------eeccccc-CCCCchhheeccCCcEEEEccCCCceEEEeecCe----------EE
Confidence 8888876321 1111111 1334568999999999999999999999965542 23
Q ss_pred eccccccccceeEEEecCCCCCCC
Q psy14815 328 HTEHRAHNQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 328 ~~~~~~h~~~v~~~~~sp~~~~l~ 351 (479)
.++ ......|+.++..|++++.+
T Consensus 257 GTv-g~~D~WIWtV~~~PNsQ~v~ 279 (1081)
T KOG1538|consen 257 GTV-GEQDSWIWTVQAKPNSQYVV 279 (1081)
T ss_pred eec-cccceeEEEEEEccCCceEE
Confidence 343 33567899999999999873
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.1e-19 Score=167.41 Aligned_cols=257 Identities=16% Similarity=0.192 Sum_probs=187.8
Q ss_pred ccceEEEEECC-CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 11 QGRVWNVSWNP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 11 ~~~V~~l~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
...|+|++|+| +..+++.|..+|.|.+||+..+..... .........|
T Consensus 242 ~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~-------------------------------s~ls~~~~sh 290 (555)
T KOG1587|consen 242 PSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPP-------------------------------SGLSALEVSH 290 (555)
T ss_pred CCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCC-------------------------------cccccccccC
Confidence 46899999999 667888888999999999876654210 1111223579
Q ss_pred CCcEEEEEECCCC--CEEEEEECCCeEEEEECCCCeE-E---EeEEEe------CCCCcEEEEEEcC-CCCEEEEEeCCC
Q psy14815 90 QRTIRETAWSPCG--NFIASASFDATTAVWDKRSGQF-E---CNATLE------GHENEVKSVTWSK-NGQFLATCSRDK 156 (479)
Q Consensus 90 ~~~v~~v~~~~~~--~~l~t~~~dg~i~iwd~~~~~~-~---~~~~~~------~~~~~v~~l~~~~-~~~~l~~~~~dg 156 (479)
..+++.+.|..+. .-+++++.||.|+.|+++.-.. . ...... .....+++++|.+ +...|++|+.+|
T Consensus 291 ~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G 370 (555)
T KOG1587|consen 291 SEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEG 370 (555)
T ss_pred CcCeEEEEEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCc
Confidence 9999999997754 4599999999999998764321 0 000001 1224688999988 677899999999
Q ss_pred cEEEEEeCCCCc-e----eeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEE
Q psy14815 157 SVWVWEVGEEDE-Y----ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSL 231 (479)
Q Consensus 157 ~i~vwd~~~~~~-~----~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~ 231 (479)
.|..-+...... . +....+..|.++|+++.++|-+..++..+.|.+++||...... .++..+..+...|+++
T Consensus 371 ~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~---~Pl~~~~~~~~~v~~v 447 (555)
T KOG1587|consen 371 KVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIA---SPLLSLDSSPDYVTDV 447 (555)
T ss_pred EEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCC---Ccchhhhhccceeeee
Confidence 987744333221 1 2244567789999999999977665555559999999987322 2466777788889999
Q ss_pred EEccCC-CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEc
Q psy14815 232 AFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 310 (479)
Q Consensus 232 ~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw 310 (479)
+|||.. ..|+++..||.|.+||+...... ++.+...+ ....+.+.|++.|+.|++|...|.+++|
T Consensus 448 aWSptrpavF~~~d~~G~l~iWDLl~~~~~-------------Pv~s~~~~-~~~l~~~~~s~~g~~lavGd~~G~~~~~ 513 (555)
T KOG1587|consen 448 AWSPTRPAVFATVDGDGNLDIWDLLQDDEE-------------PVLSQKVC-SPALTRVRWSPNGKLLAVGDANGTTHIL 513 (555)
T ss_pred EEcCcCceEEEEEcCCCceehhhhhccccC-------------Cccccccc-ccccceeecCCCCcEEEEecCCCcEEEE
Confidence 999975 45678888999999999665432 23333333 5577788999999999999999999999
Q ss_pred ccCCC
Q psy14815 311 KENPE 315 (479)
Q Consensus 311 ~~~~~ 315 (479)
++...
T Consensus 514 ~l~~~ 518 (555)
T KOG1587|consen 514 KLSES 518 (555)
T ss_pred EcCch
Confidence 98653
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.9e-18 Score=149.64 Aligned_cols=208 Identities=21% Similarity=0.336 Sum_probs=162.8
Q ss_pred cccCCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCe-----EEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEE
Q psy14815 87 DGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQ-----FECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVW 159 (479)
Q Consensus 87 ~~~~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~ 159 (479)
.+|..+|..++|+| +.+.||+|+.|.+|.||.+..+. .+++..+.+|...|--++|+| -.+.|++++.|..|.
T Consensus 78 ~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~ 157 (472)
T KOG0303|consen 78 CGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVS 157 (472)
T ss_pred cCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEE
Confidence 68999999999999 67899999999999999986542 135678899999999999999 456899999999999
Q ss_pred EEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCc-cEEEEEEccCCC
Q psy14815 160 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTS-TVWSLAFDRIGS 238 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~ 238 (479)
+||+.+++ .+..+. |...|.++.|+.+|.+|++.+.|..|+|||.++++. +..-.+|.+ .-..+.|-.++.
T Consensus 158 iWnv~tge---ali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~----v~e~~~heG~k~~Raifl~~g~ 229 (472)
T KOG0303|consen 158 IWNVGTGE---ALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTV----VSEGVAHEGAKPARAIFLASGK 229 (472)
T ss_pred EEeccCCc---eeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcE----eeecccccCCCcceeEEeccCc
Confidence 99999984 333444 999999999999999999999999999999998875 444456654 345567778888
Q ss_pred EEEEee---CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEE-EEeCCCeEEEcccCC
Q psy14815 239 RLATCS---DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA-TACGDDAIRIFKENP 314 (479)
Q Consensus 239 ~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~-~~~~dg~i~vw~~~~ 314 (479)
.+-||- .+..+-+||......+. ....+.. .+.|.---|.++.+++. +|-.|+.||-|++..
T Consensus 230 i~tTGfsr~seRq~aLwdp~nl~eP~------------~~~elDt--SnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~ 295 (472)
T KOG0303|consen 230 IFTTGFSRMSERQIALWDPNNLEEPI------------ALQELDT--SNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITN 295 (472)
T ss_pred eeeeccccccccceeccCcccccCcc------------eeEEecc--CCceEEeeecCCCCEEEEEecCCcceEEEEecC
Confidence 554443 46789999976554431 1334443 44566666778877654 455699999999987
Q ss_pred CC
Q psy14815 315 EA 316 (479)
Q Consensus 315 ~~ 316 (479)
..
T Consensus 296 d~ 297 (472)
T KOG0303|consen 296 EP 297 (472)
T ss_pred CC
Confidence 64
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-18 Score=157.19 Aligned_cols=253 Identities=18% Similarity=0.257 Sum_probs=184.8
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEE-ecccccc-ccccc----------------CCCccceEEEeecCCcEEEe
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLW-VMVIREP-YEKLH----------------GLPVETSLRQLVEDKNIRLW 70 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iw-d~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~i~~w 70 (479)
-|...|.|+.|+.....+.+++++ .+.+| |+.+... +..+. .......++..++||.+.+.
T Consensus 12 r~~e~vc~v~w~~~eei~~~~dDh-~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il 90 (737)
T KOG1524|consen 12 RNSEKVCCVDWSSNEEIYFVSDDH-QIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVIL 90 (737)
T ss_pred ccceeEEeecccccceEEEeccCc-eEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEEe
Confidence 477888899999877766666544 55555 4432211 11110 01234567788899999988
Q ss_pred cCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEE
Q psy14815 71 GKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA 150 (479)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~ 150 (479)
+... ........|.+.+.+-.|+|||.-|+++++||.|++|.-... ...++-....+|+|++|.|+.+.++
T Consensus 91 ~k~~------rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGM---LRStl~Q~~~~v~c~~W~p~S~~vl 161 (737)
T KOG1524|consen 91 NKSA------RVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGM---LRSTVVQNEESIRCARWAPNSNSIV 161 (737)
T ss_pred cccc------hhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccch---HHHHHhhcCceeEEEEECCCCCceE
Confidence 6552 122223689999999999999999999999999999985433 2233444567899999999887666
Q ss_pred EEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEE
Q psy14815 151 TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWS 230 (479)
Q Consensus 151 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~ 230 (479)
.+. .+.+.+=.+... ..+.....|.+-|.++.|++.++++++|++|-..++||-.... +..-..|..+|++
T Consensus 162 ~c~-g~h~~IKpL~~n---~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~-----Lf~S~~~ey~ITS 232 (737)
T KOG1524|consen 162 FCQ-GGHISIKPLAAN---SKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGAN-----LFTSAAEEYAITS 232 (737)
T ss_pred Eec-CCeEEEeecccc---cceeEEeccCcEEEEeecCccccceeecCCceeEEeecccCcc-----cccCChhccceee
Confidence 553 356666555544 4455678999999999999999999999999999999987533 5666789999999
Q ss_pred EEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEE
Q psy14815 231 LAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 309 (479)
Q Consensus 231 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~v 309 (479)
++|+|+ +.++.++. .++|+ .....+.|..++||+||..++.|+..|.+.+
T Consensus 233 va~npd-~~~~v~S~-nt~R~---------------------------~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~ 282 (737)
T KOG1524|consen 233 VAFNPE-KDYLLWSY-NTARF---------------------------SSPRVGSIFNLSWSADGTQATCGTSTGQLIV 282 (737)
T ss_pred eeeccc-cceeeeee-eeeee---------------------------cCCCccceEEEEEcCCCceeeccccCceEEE
Confidence 999999 56666653 33441 1123668999999999999999998887654
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.2e-18 Score=145.57 Aligned_cols=219 Identities=21% Similarity=0.335 Sum_probs=177.3
Q ss_pred cccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 6 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 6 ~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
.+.--..+|+|.+|++|++.+|.+.+...|.||.....+.-.. ...
T Consensus 5 ~~~~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~----------------------------------~ht 50 (361)
T KOG1523|consen 5 VFHRLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEP----------------------------------AHT 50 (361)
T ss_pred EeeeccCceeeeeecCCCceEEeccCCceEEEEEecCCCCcee----------------------------------cee
Confidence 3434458999999999999999999999999998765443222 122
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeC
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDK-RSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 164 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~ 164 (479)
+..|...|++++|+|..+.|++|+.|..-++|.. ..+++.+...+..++..++++.|+|.++.|++|+....|.+|-.+
T Consensus 51 ls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E 130 (361)
T KOG1523|consen 51 LSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYE 130 (361)
T ss_pred hhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEe
Confidence 3679999999999999999999999999999998 777888888888899999999999999999999999999999998
Q ss_pred CCCceeee-eeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCccc-------ce-------EeeeeecCCCccEE
Q psy14815 165 EEDEYECA-AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA-------DW-------INFATLKSHTSTVW 229 (479)
Q Consensus 165 ~~~~~~~~-~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~-------~~-------~~~~~~~~~~~~v~ 229 (479)
..+.+-.. ..-..+.+.|+++.|+|++-+|++|+.|+.+++|..--... .| ..+.++....+.+.
T Consensus 131 ~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh 210 (361)
T KOG1523|consen 131 QENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVH 210 (361)
T ss_pred cccceehhhhhCCccccceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCcee
Confidence 87654322 23345678899999999999999999999999997421110 00 12233335668899
Q ss_pred EEEEccCCCEEEEeeCCCeEEEEeccCCC
Q psy14815 230 SLAFDRIGSRLATCSDDATVKIWKEYKPG 258 (479)
Q Consensus 230 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 258 (479)
.+.|+|+|..|+-.+.|+.+.+=|...+.
T Consensus 211 ~v~fs~sG~~lawv~Hds~v~~~da~~p~ 239 (361)
T KOG1523|consen 211 GVLFSPSGNRLAWVGHDSTVSFVDAAGPS 239 (361)
T ss_pred eeEeCCCCCEeeEecCCCceEEeecCCCc
Confidence 99999999999999999999999875553
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.3e-18 Score=145.80 Aligned_cols=209 Identities=27% Similarity=0.427 Sum_probs=161.3
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEeccccccc-ccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecc
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPY-EKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSD 87 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~ 87 (479)
.|-+.|.|+.|.|++..|++-. |..|.+|+++.+..+ ..+. .....
T Consensus 121 eavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~--------------------------------ss~s~ 167 (370)
T KOG1007|consen 121 EAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVL--------------------------------SSESA 167 (370)
T ss_pred HHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeec--------------------------------ccccc
Confidence 4556899999999999998876 888999998766542 1111 11112
Q ss_pred ccCCcEEEEEECC--CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEEeC
Q psy14815 88 GHQRTIRETAWSP--CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ-FLATCSRDKSVWVWEVG 164 (479)
Q Consensus 88 ~~~~~v~~v~~~~--~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~vwd~~ 164 (479)
++....++-+|+| +++.+++.+ |+++..||+++.+. ....-..|...|..+.|+|+.+ +|++|+.||.|++||.+
T Consensus 168 e~~~~ftsg~WspHHdgnqv~tt~-d~tl~~~D~RT~~~-~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R 245 (370)
T KOG1007|consen 168 EMRHSFTSGAWSPHHDGNQVATTS-DSTLQFWDLRTMKK-NNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTR 245 (370)
T ss_pred cccceecccccCCCCccceEEEeC-CCcEEEEEccchhh-hcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEecc
Confidence 3566788889999 788887776 69999999998752 2223357888999999999765 68899999999999999
Q ss_pred CCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccc-------------------------eEee
Q psy14815 165 EEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEAD-------------------------WINF 218 (479)
Q Consensus 165 ~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~-------------------------~~~~ 218 (479)
..+ .++..+.+|...|.++.|+| ..+++++|+.|..|.+|....-... -..+
T Consensus 246 ~tk--~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l 323 (370)
T KOG1007|consen 246 KTK--FPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQL 323 (370)
T ss_pred CCC--ccccccCCCceEEEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhccccccccc
Confidence 875 67888999999999999999 4578999999999999975432200 0123
Q ss_pred eeecCCCccEEEEEEccCCCE-EEEeeCCCeEEEEec
Q psy14815 219 ATLKSHTSTVWSLAFDRIGSR-LATCSDDATVKIWKE 254 (479)
Q Consensus 219 ~~~~~~~~~v~~~~~~~~~~~-l~s~~~dg~i~iwd~ 254 (479)
.++..|...|++++|+.-..+ |++-+.||.+.|=++
T Consensus 324 ~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V 360 (370)
T KOG1007|consen 324 ETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSV 360 (370)
T ss_pred ccccccccceEEEeeccCCCeeEEEeccCceEEeecC
Confidence 456779999999999876554 678899999988765
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-16 Score=148.73 Aligned_cols=254 Identities=11% Similarity=0.105 Sum_probs=165.2
Q ss_pred ccceEEEEECCCCCeEEEee-CCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 11 QGRVWNVSWNPQGTMISSCG-EDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
.+....++++|++++|++++ .++.|.+|++.....+... .. ...
T Consensus 34 ~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~--------------------------------~~---~~~ 78 (330)
T PRK11028 34 PGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFA--------------------------------AE---SPL 78 (330)
T ss_pred CCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEe--------------------------------ee---ecC
Confidence 35677788999998887664 4777888887521111100 00 012
Q ss_pred CCcEEEEEECCCCCEEEEEEC-CCeEEEEECCCC-eE-EEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEEeCC
Q psy14815 90 QRTIRETAWSPCGNFIASASF-DATTAVWDKRSG-QF-ECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGE 165 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~-dg~i~iwd~~~~-~~-~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vwd~~~ 165 (479)
......++++|+++++++++. ++.|.+|++.+. .. .....+. +.....+++++|+++++++++ .++.|.+||+..
T Consensus 79 ~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~ 157 (330)
T PRK11028 79 PGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSD 157 (330)
T ss_pred CCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECC
Confidence 234568999999999988875 789999999642 11 1222222 223467889999999886655 468999999986
Q ss_pred CCceeee----eeeeccccceeEEEEecCCCEEEEEEc-CCcEEEEecCCcccceEeeeeecCC------CccEEEEEEc
Q psy14815 166 EDEYECA----AVINAHIQDVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWINFATLKSH------TSTVWSLAFD 234 (479)
Q Consensus 166 ~~~~~~~----~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~------~~~v~~~~~~ 234 (479)
....... .... .....+.+.|+|++++++++.. ++.|.+|+++........+..+..+ ......+.++
T Consensus 158 ~g~l~~~~~~~~~~~-~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~ 236 (330)
T PRK11028 158 DGHLVAQEPAEVTTV-EGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHIT 236 (330)
T ss_pred CCcccccCCCceecC-CCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEEC
Confidence 4322110 0111 1234678999999999988876 8999999997432122233333221 1233468899
Q ss_pred cCCCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeC-CCeEEEccc
Q psy14815 235 RIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-DDAIRIFKE 312 (479)
Q Consensus 235 ~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~-dg~i~vw~~ 312 (479)
|++++++++. .++.|.+|++..... ..+.+..... ......+.|+|+|++|++++. +++|.+|++
T Consensus 237 pdg~~lyv~~~~~~~I~v~~i~~~~~-----------~~~~~~~~~~--~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~ 303 (330)
T PRK11028 237 PDGRHLYACDRTASLISVFSVSEDGS-----------VLSFEGHQPT--ETQPRGFNIDHSGKYLIAAGQKSHHISVYEI 303 (330)
T ss_pred CCCCEEEEecCCCCeEEEEEEeCCCC-----------eEEEeEEEec--cccCCceEECCCCCEEEEEEccCCcEEEEEE
Confidence 9999998885 478999999854321 1122332222 234557899999999988775 899999988
Q ss_pred CC
Q psy14815 313 NP 314 (479)
Q Consensus 313 ~~ 314 (479)
+.
T Consensus 304 ~~ 305 (330)
T PRK11028 304 DG 305 (330)
T ss_pred cC
Confidence 64
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.7e-19 Score=149.76 Aligned_cols=305 Identities=15% Similarity=0.182 Sum_probs=200.8
Q ss_pred EEEECCCCCeEEEeeCCCcEEEEecccccccccccC---------C-CccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 16 NVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG---------L-PVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 16 ~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
-.+|||+|+++|+++.- .+.|-|.++-+....+.. . .....+.....++.+.+|++. ...+..+.
T Consensus 13 ~c~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~--Qpew~ckI-- 87 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSRY-RLVIRDSETLQLHQLFLCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLV--QPEWYCKI-- 87 (447)
T ss_pred ceeECCCCCeeeeeeee-EEEEeccchhhHHHHHHHHHHhhheeeeccceeeeeeeeccceEEEEEee--cceeEEEe--
Confidence 36899999999999865 788889888765443321 1 223345556778899999998 44444443
Q ss_pred ccccCCcEEEEEECCCCC-EEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeC
Q psy14815 86 SDGHQRTIRETAWSPCGN-FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 164 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~ 164 (479)
.....++.+++|||||+ .|.+...+-.|.+|.+.+.+.. -++-....+..++|+|||++.+.++.-.....+++.
T Consensus 88 -deg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~---~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~ 163 (447)
T KOG4497|consen 88 -DEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGY---LLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQIS 163 (447)
T ss_pred -ccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeE---EecccccCceeEEECCCCceeeeeecccHHHHHHHH
Confidence 45678999999999995 5566677899999999887532 233334456899999999999988775433333333
Q ss_pred CCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee
Q psy14815 165 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244 (479)
Q Consensus 165 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 244 (479)
..+.+..+..+.......+.+.|+|||+.|++ ||.--.- + +..+ .-.-.+..+.|+|.+++|+.|+
T Consensus 164 ~c~~W~ll~~f~~dT~DltgieWsPdg~~laV---------wd~~Ley---k-v~aY-e~~lG~k~v~wsP~~qflavGs 229 (447)
T KOG4497|consen 164 SCKAWILLKEFKLDTIDLTGIEWSPDGNWLAV---------WDNVLEY---K-VYAY-ERGLGLKFVEWSPCNQFLAVGS 229 (447)
T ss_pred hhHHHHHHHhcCCCcccccCceECCCCcEEEE---------ecchhhh---e-eeee-eeccceeEEEeccccceEEeec
Confidence 33344445555555566788999999988764 4432100 0 1111 1124578899999999999999
Q ss_pred CCCeEEEEeccCCCCCCC-------------------------------CCCCC-CC-------------CceEEEEEEe
Q psy14815 245 DDATVKIWKEYKPGNSAG-------------------------------IPTPD-ND-------------SVWKCVCTLS 279 (479)
Q Consensus 245 ~dg~i~iwd~~~~~~~~~-------------------------------~~~~~-~~-------------~~~~~~~~~~ 279 (479)
.|+.+|+-+-..-+...+ +..+. +. .....+..++
T Consensus 230 yD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lk 309 (447)
T KOG4497|consen 230 YDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLK 309 (447)
T ss_pred cchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeeccc
Confidence 999998865322111000 00000 00 0011111121
Q ss_pred c-----cccccEEEEEecCCCCeEEEEeCC--CeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCc
Q psy14815 280 G-----HHGRTIYDISWCHLTDLIATACGD--DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 280 ~-----~~~~~i~~l~~~~~~~~l~~~~~d--g~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~ 352 (479)
. .....+.-++|++|+.++++-.+. +.+-+||++..+ +..++ ....+|....|.|..+.|+.
T Consensus 310 p~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~----------l~avL-iQk~piraf~WdP~~prL~v 378 (447)
T KOG4497|consen 310 PPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLK----------LHAVL-IQKHPIRAFEWDPGRPRLVV 378 (447)
T ss_pred CCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhhh----------hhhhh-hhccceeEEEeCCCCceEEE
Confidence 0 113467789999999999987653 679999999876 44443 45679999999999998865
Q ss_pred cc
Q psy14815 353 TN 354 (479)
Q Consensus 353 ~~ 354 (479)
..
T Consensus 379 ct 380 (447)
T KOG4497|consen 379 CT 380 (447)
T ss_pred Ec
Confidence 43
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.8e-17 Score=139.88 Aligned_cols=243 Identities=17% Similarity=0.272 Sum_probs=179.2
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
+....+..+.|+.+...|..|+.|| -++|+.+....... ...
T Consensus 3 ~~~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~-------------------------------------~~~ 44 (391)
T KOG2110|consen 3 GKKPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFS-------------------------------------KDT 44 (391)
T ss_pred CCCcceeeeeeccceeEEEccCCCc-eeEEecCchHHhhc-------------------------------------ccC
Confidence 3456788888999999999999998 67887654332110 012
Q ss_pred cCCcEEEEEECCCCCEEEEEECC--CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCC
Q psy14815 89 HQRTIRETAWSPCGNFIASASFD--ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 166 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~ 166 (479)
....|.-+-|+. .++|..+.+ ..+++.+.+.+...+...+. .+|.++.++. +.|+++-.+ .|.|||+++.
T Consensus 45 ~~~~IvEmLFSS--SLvaiV~~~qpr~Lkv~~~Kk~~~ICe~~fp---t~IL~VrmNr--~RLvV~Lee-~IyIydI~~M 116 (391)
T KOG2110|consen 45 EGVSIVEMLFSS--SLVAIVSIKQPRKLKVVHFKKKTTICEIFFP---TSILAVRMNR--KRLVVCLEE-SIYIYDIKDM 116 (391)
T ss_pred CCeEEEEeeccc--ceeEEEecCCCceEEEEEcccCceEEEEecC---CceEEEEEcc--ceEEEEEcc-cEEEEecccc
Confidence 233455556654 455555554 45999999888755555543 5799999974 456666554 4999999998
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEE--cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASAS--YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 244 (479)
+.+..+.....+...+.++.+++.+.+++.-+ ..|.|.+||..+.. +...+..|.+.+.+++|+++|.+|||++
T Consensus 117 klLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~----~v~~I~aH~~~lAalafs~~G~llATAS 192 (391)
T KOG2110|consen 117 KLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQ----PVNTINAHKGPLAALAFSPDGTLLATAS 192 (391)
T ss_pred eeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccce----eeeEEEecCCceeEEEECCCCCEEEEec
Confidence 65555555556666677777777777888643 46899999998654 4788899999999999999999999999
Q ss_pred CCCe-EEEEeccCCCCCCCCCCCCCCCceEEEEEEec-cccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 245 DDAT-VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 245 ~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+.|+ |||+.+..++. +..|+. -....|.+++|+|++++|++.|..++|++|.++...
T Consensus 193 eKGTVIRVf~v~~G~k---------------l~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~~ 251 (391)
T KOG2110|consen 193 EKGTVIRVFSVPEGQK---------------LYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKVS 251 (391)
T ss_pred cCceEEEEEEcCCccE---------------eeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEecccc
Confidence 9997 79999855433 344432 224579999999999999999999999999998754
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.9e-17 Score=157.21 Aligned_cols=261 Identities=16% Similarity=0.245 Sum_probs=183.1
Q ss_pred cEEEecCCCCCCceeeeEEeccccCCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEe----EEEeCCCCcEEEE
Q psy14815 66 NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECN----ATLEGHENEVKSV 140 (479)
Q Consensus 66 ~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~----~~~~~~~~~v~~l 140 (479)
.+.+|+++....... .......|+|++|+| +..+++.|+.+|.|.+||++.+..... .....|..+++.+
T Consensus 223 ~~~vW~~~~p~~Pe~-----~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~v 297 (555)
T KOG1587|consen 223 VLLVWSLKNPNTPEL-----VLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAV 297 (555)
T ss_pred eEEEEecCCCCCceE-----EEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEE
Confidence 678898885422111 134578999999999 567889999999999999988753211 2234588899999
Q ss_pred EEcCCCC--EEEEEeCCCcEEEEEeCCCCceeeeeeee---------ccccceeEEEEec-CCCEEEEEEcCCcEEEEec
Q psy14815 141 TWSKNGQ--FLATCSRDKSVWVWEVGEEDEYECAAVIN---------AHIQDVKKVRFHP-FDNILASASYDDTVKLFKE 208 (479)
Q Consensus 141 ~~~~~~~--~l~~~~~dg~i~vwd~~~~~~~~~~~~~~---------~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~ 208 (479)
.|..+.. -|++++.||.|..|+++............ .-...+++++|.+ +-+.++.|+++|.|.--+.
T Consensus 298 vW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r 377 (555)
T KOG1587|consen 298 VWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCR 377 (555)
T ss_pred EEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEec
Confidence 9987544 49999999999999987653211111111 1123578999998 5578999999999877444
Q ss_pred CCcccce----EeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccc
Q psy14815 209 DKAEADW----INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR 284 (479)
Q Consensus 209 ~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (479)
....... +.......|.++|+++.++|-+..++..+.|.+++||...... .++..+..+ ..
T Consensus 378 ~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~--------------~Pl~~~~~~-~~ 442 (555)
T KOG1587|consen 378 KGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIA--------------SPLLSLDSS-PD 442 (555)
T ss_pred cCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCC--------------Ccchhhhhc-cc
Confidence 4333222 2344566789999999999987665555559999999874211 234444444 55
Q ss_pred cEEEEEecCCCC-eEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 285 TIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 285 ~i~~l~~~~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.+++++|||... .++++..||.+.+||+......+ .... ..+....+.+.|++.|+.|+.+.
T Consensus 443 ~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~P-------v~s~-~~~~~~l~~~~~s~~g~~lavGd 505 (555)
T KOG1587|consen 443 YVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEP-------VLSQ-KVCSPALTRVRWSPNGKLLAVGD 505 (555)
T ss_pred eeeeeEEcCcCceEEEEEcCCCceehhhhhccccCC-------cccc-cccccccceeecCCCCcEEEEec
Confidence 699999999764 77888889999999998765221 2222 12356778889999999997664
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.9e-16 Score=146.89 Aligned_cols=244 Identities=12% Similarity=0.112 Sum_probs=157.7
Q ss_pred CCcEEEEEECCCCCEEEEEE-CCCeEEEEECC-CCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-CCcEEEEEeCCC
Q psy14815 90 QRTIRETAWSPCGNFIASAS-FDATTAVWDKR-SGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DKSVWVWEVGEE 166 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~-~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~i~vwd~~~~ 166 (479)
......++++|++++|++++ .++.|.+|++. +++........ .......+.|+|+++++++++. ++.|.+|++...
T Consensus 34 ~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~ 112 (330)
T PRK11028 34 PGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKD 112 (330)
T ss_pred CCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCC
Confidence 35567789999999887765 47899999986 34433333332 2345678999999998888875 789999999743
Q ss_pred Cce-eeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccc-eE--eeeeecCCCccEEEEEEccCCCEEE
Q psy14815 167 DEY-ECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEAD-WI--NFATLKSHTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 167 ~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~-~~--~~~~~~~~~~~v~~~~~~~~~~~l~ 241 (479)
... .....+. +.....+++++|+++++++++ .++.|.+||+.+.... .. ...... .......+.|+|++++++
T Consensus 113 g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~-~g~~p~~~~~~pdg~~ly 190 (330)
T PRK11028 113 GIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTV-EGAGPRHMVFHPNQQYAY 190 (330)
T ss_pred CCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecC-CCCCCceEEECCCCCEEE
Confidence 211 1222222 223467789999998886555 5689999999763210 00 001111 223456899999999998
Q ss_pred EeeC-CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc-----ccccEEEEEecCCCCeEEEEeC-CCeEEEcccCC
Q psy14815 242 TCSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-----HGRTIYDISWCHLTDLIATACG-DDAIRIFKENP 314 (479)
Q Consensus 242 s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~l~~~~~~~~l~~~~~-dg~i~vw~~~~ 314 (479)
++.. ++.|.+|++..... ..+.+..+... .......+.++|++++++++.. ++.|.+|+++.
T Consensus 191 v~~~~~~~v~v~~~~~~~~-----------~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~ 259 (330)
T PRK11028 191 CVNELNSSVDVWQLKDPHG-----------EIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSE 259 (330)
T ss_pred EEecCCCEEEEEEEeCCCC-----------CEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeC
Confidence 8876 89999999964211 11222222211 1123346899999999988854 78999999965
Q ss_pred CCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 315 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
... ..........+ .....+.|+|||++|..+.
T Consensus 260 ~~~-----~~~~~~~~~~~--~~p~~~~~~~dg~~l~va~ 292 (330)
T PRK11028 260 DGS-----VLSFEGHQPTE--TQPRGFNIDHSGKYLIAAG 292 (330)
T ss_pred CCC-----eEEEeEEEecc--ccCCceEECCCCCEEEEEE
Confidence 431 11122222111 3456899999999997654
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-17 Score=163.02 Aligned_cols=300 Identities=16% Similarity=0.227 Sum_probs=203.2
Q ss_pred CCcEEEEeccc----ccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECC--CCCEE
Q psy14815 32 DKNIRLWVMVI----REPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP--CGNFI 105 (479)
Q Consensus 32 dg~v~iwd~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~l 105 (479)
+..|..||... .++-+.+..++..+.++++.....+.+||.+.... .... .........|+.+.+-. |..++
T Consensus 1049 t~~i~~W~~~~~~~n~~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~-l~~F-~n~~~~~t~Vs~l~liNe~D~aLl 1126 (1387)
T KOG1517|consen 1049 TNPIGNWDQKFMTGNNQPPKTLKFHPFEPQIAAADDRERIRVWDWEKGRL-LNGF-DNGAFPDTRVSDLELINEQDDALL 1126 (1387)
T ss_pred cccccchHHHHHhcCCCCCceeeecCCCceeEEcCCcceEEEEecccCce-eccc-cCCCCCCCccceeeeecccchhhe
Confidence 44567777532 23356677788899999999999999999985222 1111 11123457889998865 56789
Q ss_pred EEEECCCeEEEEECC-C--CeEEEeEEEeCC-------CCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeee
Q psy14815 106 ASASFDATTAVWDKR-S--GQFECNATLEGH-------ENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVI 175 (479)
Q Consensus 106 ~t~~~dg~i~iwd~~-~--~~~~~~~~~~~~-------~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 175 (479)
++|+.||.|+||+-. . ++.+.+....+- .+.=.-++|.....+|++++.-..|+|||..... .+....
T Consensus 1127 Ltas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~--~~~diP 1204 (1387)
T KOG1517|consen 1127 LTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQ--VVADIP 1204 (1387)
T ss_pred eeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccce--eEeecc
Confidence 999999999999643 2 222223222211 1111346777766667777778899999998763 222222
Q ss_pred eccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCcc--EEEEEEccCCC-EEEEeeCCCeEEE
Q psy14815 176 NAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST--VWSLAFDRIGS-RLATCSDDATVKI 251 (479)
Q Consensus 176 ~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~-~l~s~~~dg~i~i 251 (479)
.+....++++.-+. .|+.+++|..||.|++||.+....+ ..+...+.|+.. |..+.+.+.|- .|++|+.||.|++
T Consensus 1205 ~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~d-s~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~ 1283 (1387)
T KOG1517|consen 1205 YGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPD-SLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQL 1283 (1387)
T ss_pred cCCCccceeecccccCCceEEEeecCCceEEeecccCCcc-ccceeecccCCcccceeEEeecCCCcceeeeccCCeEEE
Confidence 33445577776543 5799999999999999999976643 346667778877 99999988664 5999999999999
Q ss_pred EeccCCCCCCCCCCCCCCCceEEEEEEeccc--cccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEec
Q psy14815 252 WKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH--GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHT 329 (479)
Q Consensus 252 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~ 329 (479)
||++...... ..+...|. ++..+++..+++...+|+|+. +.|+||++...+-..-. .-..
T Consensus 1284 ~DlR~~~~e~-------------~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l~~~k----~n~~ 1345 (1387)
T KOG1517|consen 1284 LDLRMSSKET-------------FLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQLNIIK----YNPG 1345 (1387)
T ss_pred EecccCcccc-------------cceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecChhhhcccc----cCcc
Confidence 9998752211 11122221 346999999999999999998 99999999876521100 0111
Q ss_pred cccccccceeEEEecCCCCCCCccc
Q psy14815 330 EHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 330 ~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+.....+.+.|++|+|....|+.+.
T Consensus 1346 F~~q~~gs~scL~FHP~~~llAaG~ 1370 (1387)
T KOG1517|consen 1346 FMGQRIGSVSCLAFHPHRLLLAAGS 1370 (1387)
T ss_pred cccCcCCCcceeeecchhHhhhhcc
Confidence 2223446789999999988877664
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.6e-18 Score=157.29 Aligned_cols=172 Identities=21% Similarity=0.340 Sum_probs=136.6
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
+.+.|.||++.|+|++|+.+|.+|++||+|-.+.|||.-..+.+..+
T Consensus 42 lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI--------------------------------- 88 (758)
T KOG1310|consen 42 LEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSI--------------------------------- 88 (758)
T ss_pred hhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeee---------------------------------
Confidence 45789999999999999999999999999999999997544443332
Q ss_pred EEeccccCCcEEEEEECC--CCCEEEEEECCCeEEEEECCCC--------eEEEeEEEeCCCCcEEEEEEcCCC-CEEEE
Q psy14815 83 AILSDGHQRTIRETAWSP--CGNFIASASFDATTAVWDKRSG--------QFECNATLEGHENEVKSVTWSKNG-QFLAT 151 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~--~~~~l~t~~~dg~i~iwd~~~~--------~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~ 151 (479)
..+|...|.+++|-| +.+.+++|..|..|+++|+... -.+....+..|...|..++-.|++ +.+.+
T Consensus 89 ---~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~Phtfws 165 (758)
T KOG1310|consen 89 ---STGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWS 165 (758)
T ss_pred ---ecccccceeEEeeeccCCCeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEE
Confidence 468999999999999 5678999999999999999752 123455667889999999999977 78999
Q ss_pred EeCCCcEEEEEeCCCCceee-------eeeeeccccceeEEEEecC-CCEEEEEEcCCcEEEEecCC
Q psy14815 152 CSRDKSVWVWEVGEEDEYEC-------AAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDK 210 (479)
Q Consensus 152 ~~~dg~i~vwd~~~~~~~~~-------~~~~~~~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~ 210 (479)
++.||+++-+|++....... ...+...--...|+..+|. ..+|++|+.|-..++||.+.
T Consensus 166 asEDGtirQyDiREph~c~p~~~~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr 232 (758)
T KOG1310|consen 166 ASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRR 232 (758)
T ss_pred ecCCcceeeecccCCccCCccccccHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhh
Confidence 99999999999997431111 0111112234678999994 57899999999999999763
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.2e-18 Score=151.02 Aligned_cols=201 Identities=18% Similarity=0.235 Sum_probs=153.6
Q ss_pred EEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEE
Q psy14815 15 WNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 94 (479)
Q Consensus 15 ~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~ 94 (479)
.+++|+.+|..|++|+.||++|||++.+...+... ..|...|.
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e-------------------------------------~~~~~eV~ 190 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEE-------------------------------------IAHHAEVK 190 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhh-------------------------------------HhhcCccc
Confidence 77999999999999999999999997665544332 57899999
Q ss_pred EEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCC-----CEEEEEeCCCcEEEEEeCCCCc-
Q psy14815 95 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG-----QFLATCSRDKSVWVWEVGEEDE- 168 (479)
Q Consensus 95 ~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~-----~~l~~~~~dg~i~vwd~~~~~~- 168 (479)
++.|+|||++|++.+.| ..+||+.+++......+-.........+.|+.|+ ..++....-+.|+.||+.....
T Consensus 191 DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~ 269 (398)
T KOG0771|consen 191 DLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGS 269 (398)
T ss_pred cceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccc
Confidence 99999999999999999 9999999998522222212334467788888877 3333444566788877754321
Q ss_pred -eeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCC
Q psy14815 169 -YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 247 (479)
Q Consensus 169 -~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 247 (479)
.-.......-...|++++.+++|++++.|+.||.|-+++..+.+. ....-+.|...|+.+.|+|+.+++++.+.|.
T Consensus 270 ~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~---~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~ 346 (398)
T KOG0771|consen 270 NFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQR---LQYVKEAHLGFVTGLTFSPDSRYLASVSSDN 346 (398)
T ss_pred cccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeee---eEeehhhheeeeeeEEEcCCcCcccccccCC
Confidence 011112222234699999999999999999999999999886542 3344567999999999999999999999999
Q ss_pred eEEEEeccC
Q psy14815 248 TVKIWKEYK 256 (479)
Q Consensus 248 ~i~iwd~~~ 256 (479)
...+..+..
T Consensus 347 ~~~v~~l~v 355 (398)
T KOG0771|consen 347 EAAVTKLAV 355 (398)
T ss_pred ceeEEEEee
Confidence 999888743
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.5e-16 Score=149.19 Aligned_cols=278 Identities=29% Similarity=0.489 Sum_probs=206.1
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeC-CCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGE-DKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
....+.+|...|.+++|+|+++++++++. |+.+++|++..+..+..+
T Consensus 147 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 194 (466)
T COG2319 147 LIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTL-------------------------------- 194 (466)
T ss_pred EEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEee--------------------------------
Confidence 45667899999999999999999998885 999999998764433322
Q ss_pred eEEeccccCCcEEEEEECCCCC-EEEEEECCCeEEEEECCCCeEEEeE-EEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy14815 82 KAILSDGHQRTIRETAWSPCGN-FIASASFDATTAVWDKRSGQFECNA-TLEGHENEVKSVTWSKNGQFLATCSRDKSVW 159 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~ 159 (479)
.+|...|.+++|+|++. .+++++.|+.|++||...+. ... .+..|.... ...|++++..+++++.|+.++
T Consensus 195 -----~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~ 266 (466)
T COG2319 195 -----AGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGK--LLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIR 266 (466)
T ss_pred -----ccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCc--EEeeecCCCCcce-eEeECCCCCEEEEecCCCcEE
Confidence 35889999999999998 55555999999999988665 344 577787775 448999998899999999999
Q ss_pred EEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE
Q psy14815 160 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
+|+++.... ....+..|...+.++.|+|++..+++++.|+.+.+||......... .....|...+..+.|.+++..
T Consensus 267 ~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 342 (466)
T COG2319 267 LWDLRSSSS--LLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSS--LTLKGHEGPVSSLSFSPDGSL 342 (466)
T ss_pred EeeecCCCc--EEEEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEE--eeecccCCceEEEEECCCCCE
Confidence 999997754 2223367788999999999888888899998999998886653111 113467778999999433255
Q ss_pred EEEe-eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEE-EeCCCeEEEcccCCCCC
Q psy14815 240 LATC-SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT-ACGDDAIRIFKENPEAG 317 (479)
Q Consensus 240 l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~-~~~dg~i~vw~~~~~~~ 317 (479)
++.+ ..|+.+.+|+..... ....... ...+..+.+.+ ...+.. +..++.+.+|+.....
T Consensus 343 ~~~~~~~d~~~~~~~~~~~~---------------~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~- 403 (466)
T COG2319 343 LVSGGSDDGTIRLWDLRTGK---------------PLKTLEG--HSNVLSVSFSP-DGRVVSSGSTDGTVRLWDLSTGS- 403 (466)
T ss_pred EEEeecCCCcEEeeecCCCc---------------eeEEecC--CceEEEEEECC-CCCEEEEecCCCceEEEecccCe-
Confidence 6555 678899999985442 1122222 22288889988 544444 6889999999999876
Q ss_pred CCCceeeEEEeccccccccceeEEEecCCCCCCCc
Q psy14815 318 DSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 318 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~ 352 (479)
..... ..+...+....+++++..++.
T Consensus 404 --------~~~~~-~~~~~~~~~~~~~~~~~~~~~ 429 (466)
T COG2319 404 --------LLRNL-DGHTSRVTSLDFSPDGKSLAS 429 (466)
T ss_pred --------eeeec-cCCCCcEEEEEECCCCcEEEE
Confidence 22222 122267888999999887754
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.1e-18 Score=146.86 Aligned_cols=217 Identities=18% Similarity=0.267 Sum_probs=161.7
Q ss_pred ccccccccccceEEEEECC--CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 3 NSQTLKGHQGRVWNVSWNP--QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~--~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
.++.+++|...++.+.|.. ....+.+|+.||+|++||+.+......+..
T Consensus 62 ~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~----------------------------- 112 (376)
T KOG1188|consen 62 LLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISW----------------------------- 112 (376)
T ss_pred hhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheec-----------------------------
Confidence 4678899999999999987 466889999999999999987666544321
Q ss_pred eeEEecccc-CCcEEEEEECCCCCEEEEEEC----CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeC
Q psy14815 81 AKAILSDGH-QRTIRETAWSPCGNFIASASF----DATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSR 154 (479)
Q Consensus 81 ~~~~~~~~~-~~~v~~v~~~~~~~~l~t~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~ 154 (479)
..+ ..+..|++.+..++.+++|.. +..|.+||++..+.....-.+.|.+.|+++.|+| +.++|++||.
T Consensus 113 ------~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSv 186 (376)
T KOG1188|consen 113 ------TQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSV 186 (376)
T ss_pred ------cCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecc
Confidence 122 357778888777888888864 6789999999876333344578999999999999 7789999999
Q ss_pred CCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCC-CEEEEEEcCCcEEEEecCCcccce------------------
Q psy14815 155 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADW------------------ 215 (479)
Q Consensus 155 dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~------------------ 215 (479)
||.|.+||+.....-..+...-.|...|.++.|..++ +.|.+-+...+..+|++..+....
T Consensus 187 DGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~ 266 (376)
T KOG1188|consen 187 DGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNC 266 (376)
T ss_pred cceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhh
Confidence 9999999998764433344444566778899998766 457778888888888876433100
Q ss_pred ---------------------------------------EeeeeecC-CCccEEEEEEccCCCEEEEeeCCCeEEEEec
Q psy14815 216 ---------------------------------------INFATLKS-HTSTVWSLAFDRIGSRLATCSDDATVKIWKE 254 (479)
Q Consensus 216 ---------------------------------------~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 254 (479)
.....+.+ |..-|.++.|...+.+++||++||.+.+|..
T Consensus 267 dY~I~~~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~ 345 (376)
T KOG1188|consen 267 DYVINEHSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWKV 345 (376)
T ss_pred hheeecccCCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEec
Confidence 00111222 4445666777777889999999999999985
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.9e-17 Score=158.34 Aligned_cols=235 Identities=17% Similarity=0.214 Sum_probs=160.7
Q ss_pred CcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECC---CeEEEEECCCCeEEEeEEEeCCCCcEEEEE
Q psy14815 65 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD---ATTAVWDKRSGQFECNATLEGHENEVKSVT 141 (479)
Q Consensus 65 ~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~ 141 (479)
..+.+||.+..+. .....+...+.+.+|+|||+.|+.++.+ ..|.+||+.+++...+..+.++ ...++
T Consensus 184 ~~i~i~d~dg~~~------~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~~~~ 254 (429)
T PRK01742 184 YEVRVADYDGFNQ------FIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NGAPA 254 (429)
T ss_pred EEEEEECCCCCCc------eEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cCcee
Confidence 5788998873221 1124567789999999999999988754 3799999998865445444444 34689
Q ss_pred EcCCCCEEEEEe-CCCcEEEE--EeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEe
Q psy14815 142 WSKNGQFLATCS-RDKSVWVW--EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWIN 217 (479)
Q Consensus 142 ~~~~~~~l~~~~-~dg~i~vw--d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~ 217 (479)
|+|||+.|+.++ .+|.+.+| |+.++. ...+..+...+....|+|+|+.|+.++ .+|...+|+++.......
T Consensus 255 wSPDG~~La~~~~~~g~~~Iy~~d~~~~~----~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~- 329 (429)
T PRK01742 255 FSPDGSRLAFASSKDGVLNIYVMGANGGT----PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGAS- 329 (429)
T ss_pred ECCCCCEEEEEEecCCcEEEEEEECCCCC----eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeE-
Confidence 999999888765 68876666 544432 234555666788999999999777655 578888888754332111
Q ss_pred eeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCe
Q psy14815 218 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDL 297 (479)
Q Consensus 218 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~ 297 (479)
.+ .+.. ....|+|+|++|+..+.++ +.+||+..+.. . .+... ....++.|+|+|++
T Consensus 330 --~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~---------------~-~lt~~--~~~~~~~~sPdG~~ 385 (429)
T PRK01742 330 --LV-GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGST---------------E-VLSST--FLDESPSISPNGIM 385 (429)
T ss_pred --Ee-cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCe---------------E-EecCC--CCCCCceECCCCCE
Confidence 12 2333 4578999999998887765 55688754321 1 11111 12346789999999
Q ss_pred EEEEeCCCeEEEcccCC--CCCCCCceeeEEEeccccccccceeEEEecCCC
Q psy14815 298 IATACGDDAIRIFKENP--EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347 (479)
Q Consensus 298 l~~~~~dg~i~vw~~~~--~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~ 347 (479)
|+.++.++...+|.+.. +. ....+ ..|.+.+...+|||--
T Consensus 386 i~~~s~~g~~~~l~~~~~~G~---------~~~~l-~~~~g~~~~p~wsp~~ 427 (429)
T PRK01742 386 IIYSSTQGLGKVLQLVSADGR---------FKARL-PGSDGQVKFPAWSPYL 427 (429)
T ss_pred EEEEEcCCCceEEEEEECCCC---------ceEEc-cCCCCCCCCcccCCCC
Confidence 99999999888887642 33 23333 4777888999999863
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.2e-16 Score=150.46 Aligned_cols=265 Identities=17% Similarity=0.236 Sum_probs=181.6
Q ss_pred cccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecc
Q psy14815 8 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSD 87 (479)
Q Consensus 8 ~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~ 87 (479)
..|.-.++|.++||.++++|+|..||.|.+|.--.-+ +. ........
T Consensus 202 ~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~-------------------------------~~--~~t~t~lH 248 (792)
T KOG1963|consen 202 VHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSS-------------------------------DD--SETCTLLH 248 (792)
T ss_pred hhhcccceeEEeccccceEEEeccCCcEEEEeccccc-------------------------------cc--cccceEEE
Confidence 3577779999999999999999999999999621100 00 11112224
Q ss_pred ccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCC
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 167 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~ 167 (479)
=|...|.+++|+++|.+|++|+..|.+.+|.+.+++ ..-++.-.++|..+.++||+.+.+....|..|.+....+..
T Consensus 249 WH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~---kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~ 325 (792)
T KOG1963|consen 249 WHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK---KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLE 325 (792)
T ss_pred ecccccceeEEecCCceEeecccceEEEEEeecCCC---cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchh
Confidence 588899999999999999999999999999999986 34556667899999999999999999999999998775432
Q ss_pred ceeeeeeeec--------cccceeEEEEecCCCEEEEEEcCCcEEEEecCC-----------------------------
Q psy14815 168 EYECAAVINA--------HIQDVKKVRFHPFDNILASASYDDTVKLFKEDK----------------------------- 210 (479)
Q Consensus 168 ~~~~~~~~~~--------~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~----------------------------- 210 (479)
....+..+.. ..+-.+.++++|..+.++-.+..|.|.+||+.+
T Consensus 326 ~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~ 405 (792)
T KOG1963|consen 326 IKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVA 405 (792)
T ss_pred hhhhccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeeh
Confidence 1111111111 122244555666445555555556666665433
Q ss_pred ----------------------------------cccceEeeee-ecCCCccEEEEEEcc-C-CCEEEEeeCCCeEEEEe
Q psy14815 211 ----------------------------------AEADWINFAT-LKSHTSTVWSLAFDR-I-GSRLATCSDDATVKIWK 253 (479)
Q Consensus 211 ----------------------------------~~~~~~~~~~-~~~~~~~v~~~~~~~-~-~~~l~s~~~dg~i~iwd 253 (479)
....+..... ...|...+...++.+ . ...+++++.||.+++|-
T Consensus 406 ~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~ 485 (792)
T KOG1963|consen 406 RSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWV 485 (792)
T ss_pred hhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEE
Confidence 2222222222 134555544444432 2 23788999999999999
Q ss_pred ccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCC
Q psy14815 254 EYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
+....+... ....|.|...-..| ..++++++|+.||..|+ .+.|++|.+||..+.
T Consensus 486 ~~~~~n~~k-----~~s~W~c~~i~sy~-k~~i~a~~fs~dGslla-~s~~~~Itiwd~~~~ 540 (792)
T KOG1963|consen 486 FTDDSNIYK-----KSSNWTCKAIGSYH-KTPITALCFSQDGSLLA-VSFDDTITIWDYDTK 540 (792)
T ss_pred EecccccCc-----CccceEEeeeeccc-cCcccchhhcCCCcEEE-EecCCEEEEecCCCh
Confidence 855544332 13557776655554 88999999999997665 556889999999884
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.8e-17 Score=146.27 Aligned_cols=203 Identities=20% Similarity=0.233 Sum_probs=153.7
Q ss_pred EEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeee
Q psy14815 94 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA 173 (479)
Q Consensus 94 ~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 173 (479)
.+++|+.+|..+++|+.||++|||+..+.. .+.....|...|.++.|+|||++|++-+.| ..+||+.+++..+....
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~--t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t 224 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSML--TILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKT 224 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcch--hhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcC
Confidence 789999999999999999999999987765 556667788999999999999999999999 99999999984332222
Q ss_pred eeeccccceeEEEEecCC---C--EEEEEEcCCcEEEEecCCcccc-eEeeeeecCCCccEEEEEEccCCCEEEEeeCCC
Q psy14815 174 VINAHIQDVKKVRFHPFD---N--ILASASYDDTVKLFKEDKAEAD-WINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 247 (479)
Q Consensus 174 ~~~~~~~~v~~l~~~~~~---~--~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 247 (479)
. .........+.|+.++ . .++.-..-+.|+.||+...... .-...+...-...|++++.+++|++++.|+.||
T Consensus 225 ~-~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dG 303 (398)
T KOG0771|consen 225 P-FSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDG 303 (398)
T ss_pred C-cccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCC
Confidence 1 2223446678888766 2 3333334566777776532211 011222223345799999999999999999999
Q ss_pred eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCC
Q psy14815 248 TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 248 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
.|-|++... .+++...+..|..-|+.+.|+|+.+++++.+.|....|..+...
T Consensus 304 sVai~~~~~---------------lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~vd 356 (398)
T KOG0771|consen 304 SVAIYDAKS---------------LQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAVD 356 (398)
T ss_pred cEEEEEece---------------eeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEeec
Confidence 999999733 34455555556889999999999999999999999998877654
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.5e-18 Score=154.11 Aligned_cols=244 Identities=18% Similarity=0.201 Sum_probs=179.2
Q ss_pred eccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCC------CeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcE
Q psy14815 85 LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS------GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 158 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~------~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i 158 (479)
....|.+.|+.++|.|....|++++.||++.+|+++. ...+++.++.+|.++|.|++..+++..+++|+.||+|
T Consensus 289 tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I 368 (577)
T KOG0642|consen 289 TLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTI 368 (577)
T ss_pred eeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCcee
Confidence 3467899999999999999999999999999999932 3457889999999999999999999999999999999
Q ss_pred EEEEeCCCC-------ceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEE
Q psy14815 159 WVWEVGEED-------EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSL 231 (479)
Q Consensus 159 ~vwd~~~~~-------~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~ 231 (479)
+.|++.... .......+.+|...++.+++++....|++++.||+++.|+...... +......-.+.-.++
T Consensus 369 ~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~---~~f~~~~e~g~Plsv 445 (577)
T KOG0642|consen 369 RCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP---CTFGEPKEHGYPLSV 445 (577)
T ss_pred eeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc---cccCCccccCCcceE
Confidence 999775221 1133456789999999999999989999999999999999876543 112222222333455
Q ss_pred EEccCC-CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEec------cccccEEEEEecCCCCeEEEEeCC
Q psy14815 232 AFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG------HHGRTIYDISWCHLTDLIATACGD 304 (479)
Q Consensus 232 ~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~i~~l~~~~~~~~l~~~~~d 304 (479)
.+.... .+.++ +.....+++........ +..+.. .....+..+.++|...+.+++..|
T Consensus 446 d~~ss~~a~~~~---s~~~~~~~~~~~ev~s~------------~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed 510 (577)
T KOG0642|consen 446 DRTSSRPAHSLA---SFRFGYTSIDDMEVVSD------------LLIFESSASPGPRRYPQINKVVSHPTADITFTAHED 510 (577)
T ss_pred eeccchhHhhhh---hcccccccchhhhhhhh------------eeeccccCCCcccccCccceEEecCCCCeeEecccC
Confidence 554332 12222 23333343322211110 111110 012457788999999999999999
Q ss_pred CeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccccc
Q psy14815 305 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTNLT 356 (479)
Q Consensus 305 g~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~~ 356 (479)
+.|+++|..+++ ++.. ...|...++++++.|+|.+|..+...
T Consensus 511 ~~Ir~~dn~~~~---------~l~s-~~a~~~svtslai~~ng~~l~s~s~d 552 (577)
T KOG0642|consen 511 RSIRFFDNKTGK---------ILHS-MVAHKDSVTSLAIDPNGPYLMSGSHD 552 (577)
T ss_pred Cceecccccccc---------cchh-eeeccceecceeecCCCceEEeecCC
Confidence 999999999998 3443 46899999999999999999777643
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.7e-17 Score=151.89 Aligned_cols=211 Identities=18% Similarity=0.308 Sum_probs=152.7
Q ss_pred ccceEEEEECC-CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 11 QGRVWNVSWNP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 11 ~~~V~~l~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
...|+.+.|.| |...||.+++||.|+||.+..+..-... .........|
T Consensus 627 gt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~------------------------------~tPe~~lt~h 676 (1012)
T KOG1445|consen 627 GTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENE------------------------------MTPEKILTIH 676 (1012)
T ss_pred CceeeecccCCCChHHeeecccCceEEEEEeccCCCCccc------------------------------CCcceeeecc
Confidence 46799999999 8889999999999999998765432211 1122234689
Q ss_pred CCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc
Q psy14815 90 QRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 90 ~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 168 (479)
...|+++.|+| -.+.|+++++|-+|++||+.+++ ....+.+|.+.|..++|+|+|+.+++.+.||++++|+-+..++
T Consensus 677 ~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~--~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~ 754 (1012)
T KOG1445|consen 677 GEKITSLRFHPLAADVLAVASYDSTIELWDLANAK--LYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQ 754 (1012)
T ss_pred cceEEEEEecchhhhHhhhhhccceeeeeehhhhh--hhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCC
Confidence 99999999999 45789999999999999999987 5678889999999999999999999999999999999988752
Q ss_pred eeeeeeeecc-ccceeEEEEecCCCEEEEEEcC----CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCC-EEEE
Q psy14815 169 YECAAVINAH-IQDVKKVRFHPFDNILASASYD----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLAT 242 (479)
Q Consensus 169 ~~~~~~~~~~-~~~v~~l~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s 242 (479)
.+..-.+. ...--.+.|.-+|+++++.+.| ..|.+||.++-.........+.... .+.--.+.+|.. .|++
T Consensus 755 --pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvap-s~LvP~YD~Ds~~lflt 831 (1012)
T KOG1445|consen 755 --PVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDVAP-SPLVPHYDYDSNVLFLT 831 (1012)
T ss_pred --ccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhhccCCcceeeeecccC-ccccccccCCCceEEEe
Confidence 22222211 1222357788889988887765 4588898875442111111121111 111123445544 5678
Q ss_pred eeCCCeEEEEeccC
Q psy14815 243 CSDDATVKIWKEYK 256 (479)
Q Consensus 243 ~~~dg~i~iwd~~~ 256 (479)
|-.|..|.+|.+-.
T Consensus 832 GKGD~~v~~yEv~~ 845 (1012)
T KOG1445|consen 832 GKGDRFVNMYEVIY 845 (1012)
T ss_pred cCCCceEEEEEecC
Confidence 88899999998743
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-15 Score=125.12 Aligned_cols=252 Identities=12% Similarity=0.150 Sum_probs=174.0
Q ss_pred ccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 7 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
++--...|.+-+|+|.+++|+.|+.+|.|.+..+.+-..-.. ..+...+....
T Consensus 6 l~r~~~tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa---------------------------~~~gk~~iv~e 58 (325)
T KOG0649|consen 6 LKRAYNTVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSA---------------------------EPPGKLKIVPE 58 (325)
T ss_pred HHHHHHHHHHHhhCCcceEEEEecCCCeEEEEEehhhhcccc---------------------------CCCCCcceeec
Confidence 333445678889999999999999999999998753211000 11112223334
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeE----EEe--EEEeCC-----CCcEEEEEEcCCCCEEEEEeCC
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF----ECN--ATLEGH-----ENEVKSVTWSKNGQFLATCSRD 155 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~----~~~--~~~~~~-----~~~v~~l~~~~~~~~l~~~~~d 155 (479)
.+|..+|+.++|. ..+|++|+ ||.|+=|..+.... +.. ...+.| -..|+++...|..+.++.++.|
T Consensus 59 qahdgpiy~~~f~--d~~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD 135 (325)
T KOG0649|consen 59 QAHDGPIYYLAFH--DDFLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGD 135 (325)
T ss_pred cccCCCeeeeeee--hhheeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCC
Confidence 7899999999998 45677776 59999997653210 011 111112 2368899999988878888899
Q ss_pred CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeee------ecCC-CccE
Q psy14815 156 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT------LKSH-TSTV 228 (479)
Q Consensus 156 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------~~~~-~~~v 228 (479)
+.++-||++++ +....+.+|...+.++.--.....+++|++||++|+||.++.+.. ..+.. ++.| ...|
T Consensus 136 ~~~y~~dlE~G---~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v-~~ie~yk~~~~lRp~~g~wi 211 (325)
T KOG0649|consen 136 GVIYQVDLEDG---RIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHV-SMIEPYKNPNLLRPDWGKWI 211 (325)
T ss_pred eEEEEEEecCC---EEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEecccccee-EEeccccChhhcCcccCcee
Confidence 99999999999 778889999999999998555667999999999999999987641 11111 1222 2345
Q ss_pred EEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEE
Q psy14815 229 WSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIR 308 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~ 308 (479)
.+++-+ ..++++|+ ...+.+|.++.... .+++.- ..++..+.|.. +.+++++..+.|.
T Consensus 212 gala~~--edWlvCGg-Gp~lslwhLrsse~---------------t~vfpi--pa~v~~v~F~~--d~vl~~G~g~~v~ 269 (325)
T KOG0649|consen 212 GALAVN--EDWLVCGG-GPKLSLWHLRSSES---------------TCVFPI--PARVHLVDFVD--DCVLIGGEGNHVQ 269 (325)
T ss_pred EEEecc--CceEEecC-CCceeEEeccCCCc---------------eEEEec--ccceeEeeeec--ceEEEecccccee
Confidence 666654 55777665 45799999966533 333332 34577788854 4677788777888
Q ss_pred EcccCC
Q psy14815 309 IFKENP 314 (479)
Q Consensus 309 vw~~~~ 314 (479)
-|.+..
T Consensus 270 ~~~l~G 275 (325)
T KOG0649|consen 270 SYTLNG 275 (325)
T ss_pred eeeecc
Confidence 887765
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3e-16 Score=151.29 Aligned_cols=224 Identities=15% Similarity=0.157 Sum_probs=151.6
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCC---CcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGED---KNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
.+.+..|...+.+.+|||||+.|+.++.+ ..|.+||+.+++....
T Consensus 196 ~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l-------------------------------- 243 (429)
T PRK01742 196 QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVV-------------------------------- 243 (429)
T ss_pred ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEE--------------------------------
Confidence 34566788889999999999999887643 3688998866542110
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEEE-CCCeEEEE--ECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCC
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASAS-FDATTAVW--DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDK 156 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~~-~dg~i~iw--d~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg 156 (479)
....++ ...++|+|||+.|+.++ .+|.+.|| |+.+++ ...+..+...+.+..|+|||+.|+.++ .+|
T Consensus 244 ---~~~~g~---~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~---~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g 314 (429)
T PRK01742 244 ---ASFRGH---NGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGT---PSQLTSGAGNNTEPSWSPDGQSILFTSDRSG 314 (429)
T ss_pred ---ecCCCc---cCceeECCCCCEEEEEEecCCcEEEEEEECCCCC---eEeeccCCCCcCCEEECCCCCEEEEEECCCC
Confidence 001122 33579999999888765 57765554 676664 234455666788999999999777655 578
Q ss_pred cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC
Q psy14815 157 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 236 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 236 (479)
...+|++....... ..+ .+.. .+..|+|+|+.|+.++.++ +.+||+.++.. ..+. ..+ ...++.|+|+
T Consensus 315 ~~~I~~~~~~~~~~--~~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~--~~lt--~~~--~~~~~~~sPd 382 (429)
T PRK01742 315 SPQVYRMSASGGGA--SLV-GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGST--EVLS--STF--LDESPSISPN 382 (429)
T ss_pred CceEEEEECCCCCe--EEe-cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCe--EEec--CCC--CCCCceECCC
Confidence 88999876532211 112 2222 4578999999998887765 56699987653 1111 111 2346789999
Q ss_pred CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCC
Q psy14815 237 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL 294 (479)
Q Consensus 237 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~ 294 (479)
|++|+.++.++.+.+|.+... .+.....+..+ ...+...+|+|-
T Consensus 383 G~~i~~~s~~g~~~~l~~~~~-------------~G~~~~~l~~~-~g~~~~p~wsp~ 426 (429)
T PRK01742 383 GIMIIYSSTQGLGKVLQLVSA-------------DGRFKARLPGS-DGQVKFPAWSPY 426 (429)
T ss_pred CCEEEEEEcCCCceEEEEEEC-------------CCCceEEccCC-CCCCCCcccCCC
Confidence 999999999998988886321 12335666655 567888899874
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=9e-14 Score=118.77 Aligned_cols=282 Identities=17% Similarity=0.229 Sum_probs=179.5
Q ss_pred ceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCc----------cceEEEee-------cCCcEEEecCCCC
Q psy14815 13 RVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPV----------ETSLRQLV-------EDKNIRLWGKESF 75 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~----------~~~~~~~~-------~~~~i~~w~~~~~ 75 (479)
...+++|+.|...++.|.++| .|||+++.-+....-..... .+.++.++ ..+++.+||-.
T Consensus 7 ~~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~-- 83 (346)
T KOG2111|consen 7 KTLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDL-- 83 (346)
T ss_pred ceeEEEEccCCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEecc--
Confidence 455699999999999998776 99999875333222111111 22233322 23579999943
Q ss_pred CCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCC--CCcEEEEEEcCCCCEEEE-E
Q psy14815 76 GNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGH--ENEVKSVTWSKNGQFLAT-C 152 (479)
Q Consensus 76 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~v~~l~~~~~~~~l~~-~ 152 (479)
..+.+.......+|.++.+.++ .+++.- .+.|.||...+.- ..++.++.. ...+.+++-+.+...|+. |
T Consensus 84 ----k~~~i~el~f~~~I~~V~l~r~--riVvvl-~~~I~VytF~~n~-k~l~~~et~~NPkGlC~~~~~~~k~~LafPg 155 (346)
T KOG2111|consen 84 ----KERCIIELSFNSEIKAVKLRRD--RIVVVL-ENKIYVYTFPDNP-KLLHVIETRSNPKGLCSLCPTSNKSLLAFPG 155 (346)
T ss_pred ----cCcEEEEEEeccceeeEEEcCC--eEEEEe-cCeEEEEEcCCCh-hheeeeecccCCCceEeecCCCCceEEEcCC
Confidence 2222333456789999999865 566665 4789999987431 233333322 223333333333334443 3
Q ss_pred eCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCc-EEEEecCCcccceEeeeeecC--CCccEE
Q psy14815 153 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT-VKLFKEDKAEADWINFATLKS--HTSTVW 229 (479)
Q Consensus 153 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~--~~~~v~ 229 (479)
-.-|.|++-|+..... .....+.+|.+.|.|++.+.+|..+|+++..|+ |||||..+++. +.+++- ....|.
T Consensus 156 ~k~GqvQi~dL~~~~~-~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~----l~E~RRG~d~A~iy 230 (346)
T KOG2111|consen 156 FKTGQVQIVDLASTKP-NAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTL----LQELRRGVDRADIY 230 (346)
T ss_pred CccceEEEEEhhhcCc-CCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcE----eeeeecCCchheEE
Confidence 4569999999987642 134568899999999999999999999999998 79999998875 444432 346799
Q ss_pred EEEEccCCCEEEEeeCCCeEEEEeccCCCCCCC----CC------CCCCCCceEEEEEEeccccccEEEEEecCCCCeEE
Q psy14815 230 SLAFDRIGSRLATCSDDATVKIWKEYKPGNSAG----IP------TPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA 299 (479)
Q Consensus 230 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~----~~------~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~ 299 (479)
+++|||+..+|+++|+.|+++|+.++....... .+ ...-...|. ...+.-. .++..-++|..+..-++
T Consensus 231 ~iaFSp~~s~LavsSdKgTlHiF~l~~~~~~~~~~SSl~~~~~~lpky~~S~wS-~~~f~l~-~~~~~~~~fg~~~nsvi 308 (346)
T KOG2111|consen 231 CIAFSPNSSWLAVSSDKGTLHIFSLRDTENTEDESSSLSFKRLVLPKYFSSEWS-FAKFQLP-QGTQCIIAFGSETNTVI 308 (346)
T ss_pred EEEeCCCccEEEEEcCCCeEEEEEeecCCCCccccccccccccccchhccccee-EEEEEcc-CCCcEEEEecCCCCeEE
Confidence 999999999999999999999999987543322 00 000011111 1222222 34566677776645555
Q ss_pred EEeCCCeEEEccc
Q psy14815 300 TACGDDAIRIFKE 312 (479)
Q Consensus 300 ~~~~dg~i~vw~~ 312 (479)
..+.||+-+=+.+
T Consensus 309 ~i~~Dgsy~k~~f 321 (346)
T KOG2111|consen 309 AICADGSYYKFKF 321 (346)
T ss_pred EEEeCCcEEEEEe
Confidence 5566776554443
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.4e-15 Score=130.25 Aligned_cols=256 Identities=17% Similarity=0.277 Sum_probs=170.5
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR 91 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 91 (479)
-.+..++|++.-..+|++..|-.|++||-.. . ....+......
T Consensus 99 ~dlr~~aWhqH~~~fava~nddvVriy~kss-t------------------------------------~pt~Lks~sQr 141 (445)
T KOG2139|consen 99 IDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-T------------------------------------CPTKLKSVSQR 141 (445)
T ss_pred cceeeEeechhhhhhhhhccCcEEEEeccCC-C------------------------------------CCceecchhhc
Confidence 4567788888767788888888999997543 1 11222234567
Q ss_pred cEEEEEECCC-CCEEEEEECCCeEEEEECCCC-e-----------EEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-CCc
Q psy14815 92 TIRETAWSPC-GNFIASASFDATTAVWDKRSG-Q-----------FECNATLEGHENEVKSVTWSKNGQFLATCSR-DKS 157 (479)
Q Consensus 92 ~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~~-~-----------~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~ 157 (479)
.|+|++|-|. +..|+.|+. +-|++|..... . ...+..-++| .+|+++.|.+||..+++++. |..
T Consensus 142 nvtclawRPlsaselavgCr-~gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsss 219 (445)
T KOG2139|consen 142 NVTCLAWRPLSASELAVGCR-AGICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSS 219 (445)
T ss_pred ceeEEEeccCCcceeeeeec-ceeEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcce
Confidence 8999999995 467777776 56999976421 0 0112233445 68999999999999999886 568
Q ss_pred EEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC
Q psy14815 158 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG 237 (479)
Q Consensus 158 i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 237 (479)
|.+||..++..... .....+.++-+.|+|++.+|++++-|+..++|...... ...... ...+.|...+|+|+|
T Consensus 220 i~iWdpdtg~~~pL---~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~w---t~erw~-lgsgrvqtacWspcG 292 (445)
T KOG2139|consen 220 IMIWDPDTGQKIPL---IPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSW---TKERWI-LGSGRVQTACWSPCG 292 (445)
T ss_pred EEEEcCCCCCcccc---cccCCCceeeEEEcCCCCEEEEecccceeeeehhcccc---eeccee-ccCCceeeeeecCCC
Confidence 99999998743222 22345668889999999999999999999999665322 122222 234589999999999
Q ss_pred CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEe------c--cccccEEEEEecCCCCeEEEEeCCC----
Q psy14815 238 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS------G--HHGRTIYDISWCHLTDLIATACGDD---- 305 (479)
Q Consensus 238 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~------~--~~~~~i~~l~~~~~~~~l~~~~~dg---- 305 (479)
.+|+... .|.-++|.+.-.++......+...+.-.++..+. + --.+++.+++|.|.|.+|++.-..+
T Consensus 293 sfLLf~~-sgsp~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~ 371 (445)
T KOG2139|consen 293 SFLLFAC-SGSPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVL 371 (445)
T ss_pred CEEEEEE-cCCceEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhh
Confidence 9876554 3455677776555544433222222212222111 1 1256789999999999999875543
Q ss_pred ----eEEEcccCC
Q psy14815 306 ----AIRIFKENP 314 (479)
Q Consensus 306 ----~i~vw~~~~ 314 (479)
.|..||.+.
T Consensus 372 ~~k~~i~~fdtr~ 384 (445)
T KOG2139|consen 372 LCKLHISRFDTRK 384 (445)
T ss_pred hhhhhhhhhcccc
Confidence 355565544
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.1e-17 Score=146.38 Aligned_cols=199 Identities=14% Similarity=0.229 Sum_probs=152.2
Q ss_pred CEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccce
Q psy14815 103 NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 182 (479)
Q Consensus 103 ~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v 182 (479)
..++.++.||.+.+.+-. ++ .......|.+.+.+-.|+|||.-|++++.||.|++|.-... ...++.....+|
T Consensus 76 d~~~i~s~DGkf~il~k~-~r--VE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGM----LRStl~Q~~~~v 148 (737)
T KOG1524|consen 76 DTLLICSNDGRFVILNKS-AR--VERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGM----LRSTVVQNEESI 148 (737)
T ss_pred ceEEEEcCCceEEEeccc-ch--hhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccch----HHHHHhhcCcee
Confidence 678889999999998744 33 45677899999999999999999999999999999996543 222344556789
Q ss_pred eEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCC
Q psy14815 183 KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAG 262 (479)
Q Consensus 183 ~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 262 (479)
+|++|.|+.+.++.+. .+.+.|=.+.... .+...++|.+-|.++.|++..+.+++|++|-..++||...
T Consensus 149 ~c~~W~p~S~~vl~c~-g~h~~IKpL~~n~----k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G------ 217 (737)
T KOG1524|consen 149 RCARWAPNSNSIVFCQ-GGHISIKPLAANS----KIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQG------ 217 (737)
T ss_pred EEEEECCCCCceEEec-CCeEEEeeccccc----ceeEEeccCcEEEEeecCccccceeecCCceeEEeecccC------
Confidence 9999999887665543 3456665554332 2567789999999999999999999999999999999532
Q ss_pred CCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEE
Q psy14815 263 IPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVA 342 (479)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 342 (479)
..+.+-..| +.+|++++|+|+ +.++.+|.+ ++|+ .+...+.|..++
T Consensus 218 ----------~~Lf~S~~~-ey~ITSva~npd-~~~~v~S~n-t~R~---------------------~~p~~GSifnls 263 (737)
T KOG1524|consen 218 ----------ANLFTSAAE-EYAITSVAFNPE-KDYLLWSYN-TARF---------------------SSPRVGSIFNLS 263 (737)
T ss_pred ----------cccccCChh-ccceeeeeeccc-cceeeeeee-eeee---------------------cCCCccceEEEE
Confidence 233444444 889999999999 666666643 4442 123456789999
Q ss_pred ecCCCCCCCcc
Q psy14815 343 WNPVVPEPQKT 353 (479)
Q Consensus 343 ~sp~~~~l~~~ 353 (479)
|||||..++.+
T Consensus 264 WS~DGTQ~a~g 274 (737)
T KOG1524|consen 264 WSADGTQATCG 274 (737)
T ss_pred EcCCCceeecc
Confidence 99999988544
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.5e-16 Score=134.24 Aligned_cols=266 Identities=12% Similarity=0.130 Sum_probs=191.7
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
.|...|.|++|....+++++|+.+++|.+-|+++.+.+..+.. ..
T Consensus 103 ~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~-----------------------------------~~ 147 (609)
T KOG4227|consen 103 PHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYVANE-----------------------------------NN 147 (609)
T ss_pred ccccceEEEEEccCCeeEecCCCcceeEeeecccceeeeeecc-----------------------------------cC
Confidence 3668999999999999999999999999999988776554311 22
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCe-EEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEEeCCC
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ-FECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEE 166 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vwd~~~~ 166 (479)
..+.|+.+..+|..+.|++.+.++.|.+||.+..+ ......+........++.|+| ...+|++.+..+-+.+||++..
T Consensus 148 ~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~ 227 (609)
T KOG4227|consen 148 NRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQ 227 (609)
T ss_pred cccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCceeEEeccccCCCCceeeccc
Confidence 34689999999999999999999999999998654 222333334456788999999 5678899999999999999876
Q ss_pred Cceeee----eeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC------CCccEEEEEEccC
Q psy14815 167 DEYECA----AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS------HTSTVWSLAFDRI 236 (479)
Q Consensus 167 ~~~~~~----~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~ 236 (479)
...... ..+......-.++.|+|+|+.|.+--....-.+||+-+... ++.+... ....+.+++|.-+
T Consensus 228 ~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~---~V~k~D~N~~GY~N~~T~KS~~F~~D 304 (609)
T KOG4227|consen 228 ARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRC---FVLKSDHNPNGYCNIKTIKSMTFIDD 304 (609)
T ss_pred cchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccc---eeEeccCCCCcceeeeeeeeeeeecc
Confidence 421110 11111111235678999999998877766677788765332 2222221 1234677888755
Q ss_pred CCEEEEeeCCCeEEEEeccCCCCCCCCCC--------CCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEE
Q psy14815 237 GSRLATCSDDATVKIWKEYKPGNSAGIPT--------PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIR 308 (479)
Q Consensus 237 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~ 308 (479)
. .+++|+.+-.|++|.+........+.. +...-..+.+..+++| ...++.+.|+|...+|++.+....++
T Consensus 305 ~-~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGH-RSv~NQVRF~~H~~~l~SSGVE~~~K 382 (609)
T KOG4227|consen 305 Y-TVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGH-RSVPNQVRFSQHNNLLVSSGVENSFK 382 (609)
T ss_pred e-eeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecc-cccccceeecCCcceEeccchhhhee
Confidence 4 489999999999999866544433211 1111223556788897 88999999999999999999999999
Q ss_pred EcccCC
Q psy14815 309 IFKENP 314 (479)
Q Consensus 309 vw~~~~ 314 (479)
+|.-..
T Consensus 383 lWS~~r 388 (609)
T KOG4227|consen 383 LWSDHR 388 (609)
T ss_pred cccccc
Confidence 997543
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.1e-15 Score=151.40 Aligned_cols=279 Identities=10% Similarity=0.089 Sum_probs=180.0
Q ss_pred ccccccccccceEEEEECCCC-CeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~-~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
++..|..|+..|..++.+++. .+++|||.||+|++||+..-..- +.....
T Consensus 1040 lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~-----------------------------~~s~rS 1090 (1431)
T KOG1240|consen 1040 LVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGE-----------------------------GGSARS 1090 (1431)
T ss_pred EeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcC-----------------------------cceeee
Confidence 456778899999999998754 99999999999999997532211 001111
Q ss_pred eEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCe-----EEEeEEEeCCC-CcE-EEEEEcC-CCC-EEEEE
Q psy14815 82 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ-----FECNATLEGHE-NEV-KSVTWSK-NGQ-FLATC 152 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~-----~~~~~~~~~~~-~~v-~~l~~~~-~~~-~l~~~ 152 (479)
.. ........+.++...+.++.+|.++.||.|++.++...+ ..+......+. +.+ ..-+|.. ... .++.+
T Consensus 1091 ~l-tys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~ 1169 (1431)
T KOG1240|consen 1091 EL-TYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYA 1169 (1431)
T ss_pred eE-EEeccCCceEEEEeccCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEE
Confidence 11 112356789999999999999999999999999987521 11111222222 223 3333433 233 78888
Q ss_pred eCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeee-cCCCccEEEE
Q psy14815 153 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL-KSHTSTVWSL 231 (479)
Q Consensus 153 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~~v~~~ 231 (479)
...+.|..||++........+ .....+.|++++.+|.++++++|+..|.+.+||+|-+.. +... .++..++..+
T Consensus 1170 T~~~~iv~~D~r~~~~~w~lk-~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~----i~sw~~P~~~~i~~v 1244 (1431)
T KOG1240|consen 1170 TDLSRIVSWDTRMRHDAWRLK-NQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVP----ILSWEHPARAPIRHV 1244 (1431)
T ss_pred EeccceEEecchhhhhHHhhh-cCccccceeEEEecCCceEEEEecCCceEEEEEeecCce----eecccCcccCCcceE
Confidence 889999999999864332222 233346799999999999999999999999999996553 3322 2345777777
Q ss_pred EEccCC---CEEEEee--CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEe---ccccccEEEEEecCCCCeEEEEeC
Q psy14815 232 AFDRIG---SRLATCS--DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS---GHHGRTIYDISWCHLTDLIATACG 303 (479)
Q Consensus 232 ~~~~~~---~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~l~~~~~~~~l~~~~~ 303 (479)
..+|-. ...++++ ..+.|.+|++..+.....+.............-.. ....-+.....+...+.++.+|+.
T Consensus 1245 ~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggs 1324 (1431)
T KOG1240|consen 1245 WLCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGS 1324 (1431)
T ss_pred EeeccCCCCceEEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCC
Confidence 776643 3444443 56789999997764433322211100000000000 001223334455556778999999
Q ss_pred CCeEEEcccCCCC
Q psy14815 304 DDAIRIFKENPEA 316 (479)
Q Consensus 304 dg~i~vw~~~~~~ 316 (479)
|..|+.||.....
T Consensus 1325 d~kIR~wD~~~p~ 1337 (1431)
T KOG1240|consen 1325 DMKIRKWDPTRPE 1337 (1431)
T ss_pred ccceeeccCCCcc
Confidence 9999999998875
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.3e-16 Score=127.20 Aligned_cols=229 Identities=17% Similarity=0.233 Sum_probs=162.4
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCC---------CeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRS---------GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~---------~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vw 161 (479)
..|.+-+|+|.+++|+.|..+|.|.+..+.+ ++ ..+...++|.++++.++|. ..+|++|+. |.|+-|
T Consensus 11 ~tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk-~~iv~eqahdgpiy~~~f~--d~~Lls~gd-G~V~gw 86 (325)
T KOG0649|consen 11 NTVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGK-LKIVPEQAHDGPIYYLAFH--DDFLLSGGD-GLVYGW 86 (325)
T ss_pred HHHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCC-cceeeccccCCCeeeeeee--hhheeeccC-ceEEEe
Confidence 4566678999999999999999999998753 22 3455668999999999998 346777654 999999
Q ss_pred EeCCCCc-------eeee---eeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEE
Q psy14815 162 EVGEEDE-------YECA---AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSL 231 (479)
Q Consensus 162 d~~~~~~-------~~~~---~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~ 231 (479)
..+...+ ++.. +.-...--.|+++-..|..+-++.++.|+.++-||+++++. .+.+++|+..|.++
T Consensus 87 ~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i----~r~~rGHtDYvH~v 162 (325)
T KOG0649|consen 87 EWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRI----QREYRGHTDYVHSV 162 (325)
T ss_pred eehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEE----EEEEcCCcceeeee
Confidence 8765422 0000 00001122488999999888888888999999999998774 78899999999999
Q ss_pred EEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcc
Q psy14815 232 AFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 232 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~ 311 (479)
.--.....+++|++||++|+||+++.+....+..- +....++.|.+..|-+++- +..+|++|+ .-.+.+|+
T Consensus 163 v~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~y------k~~~~lRp~~g~wigala~--~edWlvCGg-Gp~lslwh 233 (325)
T KOG0649|consen 163 VGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPY------KNPNLLRPDWGKWIGALAV--NEDWLVCGG-GPKLSLWH 233 (325)
T ss_pred eecccCcceeecCCCccEEEEeccccceeEEeccc------cChhhcCcccCceeEEEec--cCceEEecC-CCceeEEe
Confidence 98556667899999999999999776554332211 1111223334556777776 455777665 46899999
Q ss_pred cCCCCCCCCceeeEEEeccccccccceeEEEecCCC
Q psy14815 312 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347 (479)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~ 347 (479)
+++.+ +...+ .-.+++..+.|-.|.
T Consensus 234 Lrsse---------~t~vf--pipa~v~~v~F~~d~ 258 (325)
T KOG0649|consen 234 LRSSE---------STCVF--PIPARVHLVDFVDDC 258 (325)
T ss_pred ccCCC---------ceEEE--ecccceeEeeeecce
Confidence 99887 22222 234567777776653
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=3e-14 Score=124.04 Aligned_cols=216 Identities=18% Similarity=0.196 Sum_probs=152.3
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe---CCCCcEEEEEEcCCCCEEEEEe--CCCcEEEEEe
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE---GHENEVKSVTWSKNGQFLATCS--RDKSVWVWEV 163 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~v~~l~~~~~~~~l~~~~--~dg~i~vwd~ 163 (479)
...+|.++.++. ++|+++-.+ .|.|||+++.+ .+.++. .+...+.++++++.+.+++.-+ ..|.|.+||.
T Consensus 86 fpt~IL~VrmNr--~RLvV~Lee-~IyIydI~~Mk--lLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~ 160 (391)
T KOG2110|consen 86 FPTSILAVRMNR--KRLVVCLEE-SIYIYDIKDMK--LLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDT 160 (391)
T ss_pred cCCceEEEEEcc--ceEEEEEcc-cEEEEecccce--eehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEc
Confidence 456888888864 467776654 49999999986 444443 3445567777777777887643 3689999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCc-EEEEecCCcccceEeeeeecC--CCccEEEEEEccCCCEE
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT-VKLFKEDKAEADWINFATLKS--HTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l 240 (479)
.+. +....+..|++++.+++|+++|.+||++++.|+ ||+|.+..+.. +.+++- ....|.+++|+|++++|
T Consensus 161 ~nl---~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~k----l~eFRRG~~~~~IySL~Fs~ds~~L 233 (391)
T KOG2110|consen 161 INL---QPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQK----LYEFRRGTYPVSIYSLSFSPDSQFL 233 (391)
T ss_pred ccc---eeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccE----eeeeeCCceeeEEEEEEECCCCCeE
Confidence 887 667788899999999999999999999999997 79999987775 444432 24568999999999999
Q ss_pred EEeeCCCeEEEEeccCCCCCCCCCCCCCC-------------------C---ceEEEEEEeccccc--cEEEEEecCCCC
Q psy14815 241 ATCSDDATVKIWKEYKPGNSAGIPTPDND-------------------S---VWKCVCTLSGHHGR--TIYDISWCHLTD 296 (479)
Q Consensus 241 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-------------------~---~~~~~~~~~~~~~~--~i~~l~~~~~~~ 296 (479)
++.+..++|++|.+........-.+.... . ..+...+.+..... .+..+.-.+...
T Consensus 234 ~~sS~TeTVHiFKL~~~~~~~~~~p~~~~~~~~~~sk~~~sylps~V~~~~~~~R~FAt~~l~~s~~~~~~~l~~~~~~~ 313 (391)
T KOG2110|consen 234 AASSNTETVHIFKLEKVSNNPPESPTAGTSWFGKVSKAATSYLPSQVSSVLDQSRKFATAKLPESGRKNICSLSSIQKIP 313 (391)
T ss_pred EEecCCCeEEEEEecccccCCCCCCCCCCcccchhhhhhhhhcchhhhhhhhhccceeEEEccCCCccceEEeeccCCCC
Confidence 99999999999998765432221000000 0 00111111211111 333333335678
Q ss_pred eEEEEeCCCeEEEcccCCCC
Q psy14815 297 LIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 297 ~l~~~~~dg~i~vw~~~~~~ 316 (479)
++..++.||.++.|.+...+
T Consensus 314 ~v~vas~dG~~y~y~l~~~~ 333 (391)
T KOG2110|consen 314 RVLVASYDGHLYSYRLPPKE 333 (391)
T ss_pred EEEEEEcCCeEEEEEcCCCC
Confidence 89999999999999998754
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.1e-16 Score=130.08 Aligned_cols=243 Identities=17% Similarity=0.245 Sum_probs=162.7
Q ss_pred cc-ccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccc--cccCCCccceEEEeecCCcE----EEecCCC-----
Q psy14815 7 LK-GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYE--KLHGLPVETSLRQLVEDKNI----RLWGKES----- 74 (479)
Q Consensus 7 l~-~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~i----~~w~~~~----- 74 (479)
++ .|...|+.+.--|+ ..|.|-+.|+.+.+|++.-+.-+. ++..+.....-.+.....+. ..++-+.
T Consensus 51 ~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h 129 (323)
T KOG0322|consen 51 IRLFGRLFITNLQSIPN-DSLDTQGRDPLLILWTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETH 129 (323)
T ss_pred hhhhccceeeceeecCC-cchhhcCCCceEEEEEccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhh
Confidence 44 46788999988887 578888899999999986533221 11111111111111111111 1111111
Q ss_pred ---CCCceeee--EEeccccCCcEEEEEECC-CC--CEEEEEECCCeEEEEECCCCeE--------EEeEEEeCCCCcEE
Q psy14815 75 ---FGNKFTAK--AILSDGHQRTIRETAWSP-CG--NFIASASFDATTAVWDKRSGQF--------ECNATLEGHENEVK 138 (479)
Q Consensus 75 ---~~~~~~~~--~~~~~~~~~~v~~v~~~~-~~--~~l~t~~~dg~i~iwd~~~~~~--------~~~~~~~~~~~~v~ 138 (479)
.+...... .-...+..+.+.|..+.. ++ -+++.|-++|.+.+||+.++.. ........|..+|.
T Consensus 130 ~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvl 209 (323)
T KOG0322|consen 130 KQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVL 209 (323)
T ss_pred hhccCccceeEccCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcce
Confidence 00000000 001134456777777643 22 3567778899999999998731 12233456889999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEeCCCC-ceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEe
Q psy14815 139 SVTWSKNGQFLATCSRDKSVWVWEVGEED-EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 217 (479)
Q Consensus 139 ~l~~~~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 217 (479)
++.+.+.-..=++|+.+..+..|++.... ..+.-....-..-.+..+..-||++.+++++.|+.||+|..++..+
T Consensus 210 sldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~p---- 285 (323)
T KOG0322|consen 210 SLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNP---- 285 (323)
T ss_pred eeeechhhcCCcCCCccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCc----
Confidence 99998866666888888899999987542 2222222233334588899999999999999999999999997764
Q ss_pred eeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEec
Q psy14815 218 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 254 (479)
Q Consensus 218 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 254 (479)
+..+..|...|++++|+|+...+++++.|++|-+|++
T Consensus 286 LAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 286 LAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred hhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 7888899999999999999999999999999999986
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.1e-17 Score=145.45 Aligned_cols=262 Identities=18% Similarity=0.229 Sum_probs=200.7
Q ss_pred ceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCc
Q psy14815 13 RVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRT 92 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 92 (479)
.-..+.++.+|++|+.|+..|.|-.+|+.++.....+ .-...
T Consensus 131 GPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei--------------------------------------~v~Et 172 (545)
T KOG1272|consen 131 GPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEI--------------------------------------NVMET 172 (545)
T ss_pred CCeeeeecCCccEEEecCCccceeeeecccceeeeee--------------------------------------ehhhh
Confidence 4567889999999999999999999999887766554 23467
Q ss_pred EEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeee
Q psy14815 93 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA 172 (479)
Q Consensus 93 v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 172 (479)
|.++.|-.+.+++|++- ...+.|||-..- .++.++.| ..|..+.|.|..-+|++++..|.++.-|+..+ +.+
T Consensus 173 v~Dv~~LHneq~~AVAQ-K~y~yvYD~~Gt---ElHClk~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~G---klV 244 (545)
T KOG1272|consen 173 VRDVTFLHNEQFFAVAQ-KKYVYVYDNNGT---ELHCLKRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTG---KLV 244 (545)
T ss_pred hhhhhhhcchHHHHhhh-hceEEEecCCCc---EEeehhhc-CchhhhcccchhheeeecccCCceEEEeechh---hhh
Confidence 88899988888888776 478999996544 45556544 47899999999999999999999999999998 555
Q ss_pred eeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEE
Q psy14815 173 AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 252 (479)
Q Consensus 173 ~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw 252 (479)
..+..-.+.+..++-+|-+-.+-+|..+|+|.+|.....++ +..+..|.++|.++++.++|.+++|.+.|..++||
T Consensus 245 a~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skeP----LvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIW 320 (545)
T KOG1272|consen 245 ASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEP----LVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIW 320 (545)
T ss_pred HHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcch----HHHHHhcCCCcceEEECCCCcEEeecccccceeEe
Confidence 56666677888899999889999999999999999886654 77788999999999999999999999999999999
Q ss_pred eccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEecccc
Q psy14815 253 KEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 332 (479)
Q Consensus 253 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~ 332 (479)
|++...+ +.++.. ..+...+++|..| +|| .+....+.+|.=...... .....+.
T Consensus 321 DlR~~~q---------------l~t~~t--p~~a~~ls~Sqkg-lLA-~~~G~~v~iw~d~~~~s~-------~~~~pYm 374 (545)
T KOG1272|consen 321 DLRNFYQ---------------LHTYRT--PHPASNLSLSQKG-LLA-LSYGDHVQIWKDALKGSG-------HGETPYM 374 (545)
T ss_pred eeccccc---------------cceeec--CCCcccccccccc-cee-eecCCeeeeehhhhcCCC-------CCCcchh
Confidence 9976543 233332 2366778888766 344 444568899954332111 0111111
Q ss_pred cc--ccceeEEEecCCCCCC
Q psy14815 333 AH--NQDVNCVAWNPVVPEP 350 (479)
Q Consensus 333 ~h--~~~v~~~~~sp~~~~l 350 (479)
.| .++|..+.|.|-...|
T Consensus 375 ~H~~~~~V~~l~FcP~EDvL 394 (545)
T KOG1272|consen 375 NHRCGGPVEDLRFCPYEDVL 394 (545)
T ss_pred hhccCcccccceeccHHHee
Confidence 22 2578888888876666
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.6e-15 Score=134.88 Aligned_cols=276 Identities=12% Similarity=0.140 Sum_probs=188.0
Q ss_pred ccccceEEEEECCCCCeE-EEeeCCCcEEEEecccccccccccCC----------CccceEEEeecCCcEEEecCCCCCC
Q psy14815 9 GHQGRVWNVSWNPQGTMI-SSCGEDKNIRLWVMVIREPYEKLHGL----------PVETSLRQLVEDKNIRLWGKESFGN 77 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l-~t~~~dg~v~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~~i~~w~~~~~~~ 77 (479)
+|...-+.|..+|||+|+ |||..--.|++||+..-...-.-... .+-...+..-.|..|.+-..- .
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~---G 125 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKY---G 125 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhc---C
Confidence 477888999999999986 56668889999998653321111111 112223333344444432211 0
Q ss_pred ceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc
Q psy14815 78 KFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 157 (479)
Q Consensus 78 ~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~ 157 (479)
.... ..-...-..++++.-..-|+.++....|.-++++.|+ .+..+....+.++++..++...+|++|+.+|.
T Consensus 126 ~hy~-----~RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGr--fL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~ 198 (703)
T KOG2321|consen 126 RHYR-----TRIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGR--FLNPFETDSGELNVVSINEEHGLLACGTEDGV 198 (703)
T ss_pred eeee-----eecCcCCccccccCCCccEEEeecCcceEEEEccccc--cccccccccccceeeeecCccceEEecccCce
Confidence 0000 1112334556666544445555556789999999997 55667767789999999998899999999999
Q ss_pred EEEEEeCCCCceeee---eeeecccc-----ceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEE
Q psy14815 158 VWVWEVGEEDEYECA---AVINAHIQ-----DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW 229 (479)
Q Consensus 158 i~vwd~~~~~~~~~~---~~~~~~~~-----~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~ 229 (479)
|.+||.++......+ .....|.+ .|+++.|+.+|-.+++|+.+|.|.|||++...+ .+..-.....+|.
T Consensus 199 VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~p---l~~kdh~~e~pi~ 275 (703)
T KOG2321|consen 199 VEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKP---LLVKDHGYELPIK 275 (703)
T ss_pred EEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCc---eeecccCCcccee
Confidence 999999987432222 12223333 399999999999999999999999999998775 3344445567889
Q ss_pred EEEEccC--CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeE
Q psy14815 230 SLAFDRI--GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAI 307 (479)
Q Consensus 230 ~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i 307 (479)
.+.|.+. ++.+++. ....++|||-..+. ....+.. ...++.+++-|++.+++++..++.+
T Consensus 276 ~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk---------------~~asiEp--t~~lND~C~~p~sGm~f~Ane~~~m 337 (703)
T KOG2321|consen 276 KLDWQDTDQQNKVVSM-DKRILKIWDECTGK---------------PMASIEP--TSDLNDFCFVPGSGMFFTANESSKM 337 (703)
T ss_pred eecccccCCCceEEec-chHHhhhcccccCC---------------ceeeccc--cCCcCceeeecCCceEEEecCCCcc
Confidence 9999776 3455554 35679999974443 3344443 4469999999999999999998888
Q ss_pred EEcccCCC
Q psy14815 308 RIFKENPE 315 (479)
Q Consensus 308 ~vw~~~~~ 315 (479)
..|=+..-
T Consensus 338 ~~yyiP~L 345 (703)
T KOG2321|consen 338 HTYYIPSL 345 (703)
T ss_pred eeEEcccc
Confidence 77766543
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.4e-14 Score=137.82 Aligned_cols=234 Identities=13% Similarity=0.170 Sum_probs=154.6
Q ss_pred cEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEEC---CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEE
Q psy14815 66 NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF---DATTAVWDKRSGQFECNATLEGHENEVKSVTW 142 (479)
Q Consensus 66 ~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~ 142 (479)
.+.++|.+..+. ... ..+...+.+.+|+|||+.|+..+. +..|.+|++.+++...+..+.+ .+....|
T Consensus 180 ~l~~~d~dg~~~----~~l--t~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~---~~~~~~~ 250 (429)
T PRK03629 180 ELRVSDYDGYNQ----FVV--HRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPR---HNGAPAF 250 (429)
T ss_pred eEEEEcCCCCCC----EEe--ecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCC---CcCCeEE
Confidence 577787763221 111 235678999999999999987653 3579999999886544444443 3456899
Q ss_pred cCCCCEEEEE-eCCC--cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcC-CcEEEE--ecCCcccceE
Q psy14815 143 SKNGQFLATC-SRDK--SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD-DTVKLF--KEDKAEADWI 216 (479)
Q Consensus 143 ~~~~~~l~~~-~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-g~i~i~--d~~~~~~~~~ 216 (479)
+|||+.|+.. +.+| .|.+||+.++.. ..+..+...+....|+|+|+.|+..+.+ +...+| |+.++..
T Consensus 251 SPDG~~La~~~~~~g~~~I~~~d~~tg~~----~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~--- 323 (429)
T PRK03629 251 SPDGSKLAFALSKTGSLNLYVMDLASGQI----RQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAP--- 323 (429)
T ss_pred CCCCCEEEEEEcCCCCcEEEEEECCCCCE----EEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCe---
Confidence 9999988765 4455 488899987632 2333344567889999999988877654 444455 5554432
Q ss_pred eeeeecCCCccEEEEEEccCCCEEEEeeCC---CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC
Q psy14815 217 NFATLKSHTSTVWSLAFDRIGSRLATCSDD---ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 293 (479)
Q Consensus 217 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~ 293 (479)
..+...........|+|+|++|+..+.+ ..|.+||+..... ..+.. ........|+|
T Consensus 324 --~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~----------------~~Lt~--~~~~~~p~~Sp 383 (429)
T PRK03629 324 --QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV----------------QVLTD--TFLDETPSIAP 383 (429)
T ss_pred --EEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCe----------------EEeCC--CCCCCCceECC
Confidence 2222333445678999999998776543 3578888744321 12221 11234678999
Q ss_pred CCCeEEEEeCCCe---EEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCC
Q psy14815 294 LTDLIATACGDDA---IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV 346 (479)
Q Consensus 294 ~~~~l~~~~~dg~---i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 346 (479)
||++|+.++.++. +.+++++... ...+ .+|.+.+...+|||-
T Consensus 384 DG~~i~~~s~~~~~~~l~~~~~~G~~----------~~~l-~~~~~~~~~p~Wsp~ 428 (429)
T PRK03629 384 NGTMVIYSSSQGMGSVLNLVSTDGRF----------KARL-PATDGQVKFPAWSPY 428 (429)
T ss_pred CCCEEEEEEcCCCceEEEEEECCCCC----------eEEC-ccCCCCcCCcccCCC
Confidence 9999999888764 6777776554 3333 467788899999984
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.8e-14 Score=135.95 Aligned_cols=233 Identities=11% Similarity=0.149 Sum_probs=153.0
Q ss_pred cEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEEC---CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEE
Q psy14815 66 NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF---DATTAVWDKRSGQFECNATLEGHENEVKSVTW 142 (479)
Q Consensus 66 ~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~ 142 (479)
.|.++|.+. ... . ....+...+.+.+|+|||+.|+..+. +..|.+||+.+++.. .+..+.+.+.+..|
T Consensus 183 ~l~~~d~dg--~~~--~--~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~---~l~~~~g~~~~~~~ 253 (435)
T PRK05137 183 RLAIMDQDG--ANV--R--YLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE---LVGNFPGMTFAPRF 253 (435)
T ss_pred EEEEECCCC--CCc--E--EEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE---EeecCCCcccCcEE
Confidence 577777652 211 1 12356778999999999999988764 468999999988643 33445567788999
Q ss_pred cCCCCEEE-EEeCCCc--EEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc-CC--cEEEEecCCcccceE
Q psy14815 143 SKNGQFLA-TCSRDKS--VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DD--TVKLFKEDKAEADWI 216 (479)
Q Consensus 143 ~~~~~~l~-~~~~dg~--i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~ 216 (479)
+|||+.|+ +.+.++. |.+||+.++. ...+..+........|+|+|+.|+..+. +| .|.++|+..+..
T Consensus 254 SPDG~~la~~~~~~g~~~Iy~~d~~~~~----~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~--- 326 (435)
T PRK05137 254 SPDGRKVVMSLSQGGNTDIYTMDLRSGT----TTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNP--- 326 (435)
T ss_pred CCCCCEEEEEEecCCCceEEEEECCCCc----eEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCe---
Confidence 99998775 5555665 6667887653 2334445556678999999998887764 33 577888765442
Q ss_pred eeeeecCCCccEEEEEEccCCCEEEEeeCC---CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC
Q psy14815 217 NFATLKSHTSTVWSLAFDRIGSRLATCSDD---ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 293 (479)
Q Consensus 217 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~ 293 (479)
..+..+...+....|+|+|+.|+..+.+ ..|.+||+.... ...+.. ...+....|+|
T Consensus 327 --~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~----------------~~~lt~--~~~~~~p~~sp 386 (435)
T PRK05137 327 --RRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG----------------ERILTS--GFLVEGPTWAP 386 (435)
T ss_pred --EEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCc----------------eEeccC--CCCCCCCeECC
Confidence 2232334556678899999999876643 357777753221 111211 22466789999
Q ss_pred CCCeEEEEeCC------CeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCC
Q psy14815 294 LTDLIATACGD------DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV 346 (479)
Q Consensus 294 ~~~~l~~~~~d------g~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 346 (479)
||+.|+..+.+ ..++++++..+. ...+. ..+.+...+|||-
T Consensus 387 DG~~i~~~~~~~~~~~~~~L~~~dl~g~~----------~~~l~--~~~~~~~p~Wsp~ 433 (435)
T PRK05137 387 NGRVIMFFRQTPGSGGAPKLYTVDLTGRN----------EREVP--TPGDASDPAWSPL 433 (435)
T ss_pred CCCEEEEEEccCCCCCcceEEEEECCCCc----------eEEcc--CCCCccCcccCCC
Confidence 99988776543 257777876654 22222 2334667788874
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.1e-14 Score=136.86 Aligned_cols=233 Identities=18% Similarity=0.213 Sum_probs=150.9
Q ss_pred cEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECC---CeEEEEECCCCeEEEeEEEeCCCCcEEEEEE
Q psy14815 66 NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD---ATTAVWDKRSGQFECNATLEGHENEVKSVTW 142 (479)
Q Consensus 66 ~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~ 142 (479)
.+.+||...... .. ...+...+.+.+|+|||+.|+.++.+ ..|.+||+.+++...+.. ..+...+..|
T Consensus 185 ~l~i~D~~g~~~----~~--lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~---~~g~~~~~~~ 255 (433)
T PRK04922 185 ALQVADSDGYNP----QT--ILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVAS---FRGINGAPSF 255 (433)
T ss_pred EEEEECCCCCCc----eE--eecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEecc---CCCCccCceE
Confidence 588888763211 11 23456789999999999999988743 479999999886443332 3344567899
Q ss_pred cCCCCEEE-EEeCCC--cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc-CCc--EEEEecCCcccceE
Q psy14815 143 SKNGQFLA-TCSRDK--SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DDT--VKLFKEDKAEADWI 216 (479)
Q Consensus 143 ~~~~~~l~-~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~--i~i~d~~~~~~~~~ 216 (479)
+|||+.++ +.+.+| .|.+||+.++. ...+..+.......+|+|+|+.|+..+. +|. |.++|+.++.. .
T Consensus 256 SpDG~~l~~~~s~~g~~~Iy~~d~~~g~----~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~--~ 329 (433)
T PRK04922 256 SPDGRRLALTLSRDGNPEIYVMDLGSRQ----LTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSA--E 329 (433)
T ss_pred CCCCCEEEEEEeCCCCceEEEEECCCCC----eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCe--E
Confidence 99999775 445555 58999998763 2234444445567899999998887764 444 66666655442 1
Q ss_pred eeeeecCCCccEEEEEEccCCCEEEEeeCCC---eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC
Q psy14815 217 NFATLKSHTSTVWSLAFDRIGSRLATCSDDA---TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 293 (479)
Q Consensus 217 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~ 293 (479)
. +..+.......+|+|+|++|+..+.++ .|.+||+..... ..+.. ........|+|
T Consensus 330 ~---lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~----------------~~Lt~--~~~~~~p~~sp 388 (433)
T PRK04922 330 R---LTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSV----------------RTLTP--GSLDESPSFAP 388 (433)
T ss_pred E---eecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCe----------------EECCC--CCCCCCceECC
Confidence 1 222233345689999999998765433 589999744321 12221 12334578999
Q ss_pred CCCeEEEEeCC---CeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecC
Q psy14815 294 LTDLIATACGD---DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 345 (479)
Q Consensus 294 ~~~~l~~~~~d---g~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp 345 (479)
||++++..+.+ +.+.+++...+. ...+ ..+.+.+...+|||
T Consensus 389 dG~~i~~~s~~~g~~~L~~~~~~g~~----------~~~l-~~~~g~~~~p~wsp 432 (433)
T PRK04922 389 NGSMVLYATREGGRGVLAAVSTDGRV----------RQRL-VSADGEVREPAWSP 432 (433)
T ss_pred CCCEEEEEEecCCceEEEEEECCCCc----------eEEc-ccCCCCCCCCccCC
Confidence 99988776653 457777775543 2222 23456677888887
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=2e-16 Score=150.52 Aligned_cols=225 Identities=19% Similarity=0.318 Sum_probs=176.5
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCC
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~ 165 (479)
..+|...|+|+.|...|.++++|+.|..++||..+++. +...+.+|.+.++.++.+.+..++++++.|..|++|.+.+
T Consensus 186 LlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~--~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~ 263 (1113)
T KOG0644|consen 186 LLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETAR--CLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPD 263 (1113)
T ss_pred HHhhhhheeeeeeccccceEeecCccceeeeeeccchh--hhccCCCCccccchhccchhhhhhhhcccCceEEEEecCC
Confidence 35899999999999999999999999999999998885 8899999999999999999999999999999999999999
Q ss_pred CCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeC
Q psy14815 166 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 245 (479)
Q Consensus 166 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 245 (479)
+ ..+..+.+|.+.|++++|+|-. +.+.||++++||.+-....+.+.-.-.....-+.++.|..++..++|++.
T Consensus 264 ~---~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~ 336 (1113)
T KOG0644|consen 264 G---APVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSR 336 (1113)
T ss_pred C---chHHHHhccccceeeeccCccc----cCCCCCceEeccccccccccCCCCCCcccccceeeeeccccccccccccC
Confidence 8 6778899999999999999954 77899999999998211111100001112355677888888889999999
Q ss_pred CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCC-CCeEEEEeCCCeEEEcccCCCCCCCCceee
Q psy14815 246 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL-TDLIATACGDDAIRIFKENPEAGDSDMVSF 324 (479)
Q Consensus 246 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~-~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~ 324 (479)
|+.-..|.+.... .+ ...+.-+.++.+ ..+.+++-.+-.+++|++..+.
T Consensus 337 d~ea~n~e~~~l~---------------------~~-~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~-------- 386 (1113)
T KOG0644|consen 337 DGEARNHEFEQLA---------------------WR-SNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQ-------- 386 (1113)
T ss_pred CcccccchhhHhh---------------------hh-ccceEEEeccccccccceeeeeeeEeeeeecccch--------
Confidence 9998888752211 10 111111222212 2467777788899999999997
Q ss_pred EEEeccccccccceeEEEecCCCCCCC
Q psy14815 325 DLVHTEHRAHNQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 325 ~~~~~~~~~h~~~v~~~~~sp~~~~l~ 351 (479)
+.....+|...+..+.++|-.+.++
T Consensus 387 --l~H~l~ghsd~~yvLd~Hpfn~ri~ 411 (1113)
T KOG0644|consen 387 --LLHNLMGHSDEVYVLDVHPFNPRIA 411 (1113)
T ss_pred --hhhhhcccccceeeeeecCCCcHhh
Confidence 5556679999999999999888773
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=9.2e-15 Score=132.96 Aligned_cols=173 Identities=15% Similarity=0.210 Sum_probs=126.9
Q ss_pred CCCCEEEEEECCCeEEEEECCCCeEEEeEEEe--CCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEEeCCCC---------
Q psy14815 100 PCGNFIASASFDATTAVWDKRSGQFECNATLE--GHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEED--------- 167 (479)
Q Consensus 100 ~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vwd~~~~~--------- 167 (479)
|.+--++.|-.-|.|.+.|....+...+.... -.+..|+|+.|-| +...++++-.+|.+.+||..-..
T Consensus 183 ~~g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~ 262 (636)
T KOG2394|consen 183 PKGLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQA 262 (636)
T ss_pred CCCcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccc
Confidence 45666778888899999987653321111111 1236899999999 45577788889999999764210
Q ss_pred -----ce-----------eeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEE
Q psy14815 168 -----EY-----------ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSL 231 (479)
Q Consensus 168 -----~~-----------~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~ 231 (479)
.. .++..+.-....|...+|+|||++||+.+.||.+||||..+.+. +...+..-+...|+
T Consensus 263 ~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eL----lg~mkSYFGGLLCv 338 (636)
T KOG2394|consen 263 LKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQEL----LGVMKSYFGGLLCV 338 (636)
T ss_pred cCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHH----HHHHHhhccceEEE
Confidence 00 01111222344688999999999999999999999999996553 44555667889999
Q ss_pred EEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec
Q psy14815 232 AFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 292 (479)
Q Consensus 232 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 292 (479)
+|||||++|++|++|.-|.||.+. ..+.+..-.+| ...|..++|.
T Consensus 339 cWSPDGKyIvtGGEDDLVtVwSf~---------------erRVVARGqGH-kSWVs~VaFD 383 (636)
T KOG2394|consen 339 CWSPDGKYIVTGGEDDLVTVWSFE---------------ERRVVARGQGH-KSWVSVVAFD 383 (636)
T ss_pred EEcCCccEEEecCCcceEEEEEec---------------cceEEEecccc-ccceeeEeec
Confidence 999999999999999999999983 33566777776 8899999987
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.6e-14 Score=125.21 Aligned_cols=230 Identities=13% Similarity=0.139 Sum_probs=169.7
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCe--EEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCC--CcEEEEEe
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ--FECNATLEGHENEVKSVTWSK-NGQFLATCSRD--KSVWVWEV 163 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~d--g~i~vwd~ 163 (479)
...+|..++.. ...|++|-.+|.+.+|..+.+. ......+..+ ..+..+.-++ +...+++|+.. ..+.+||+
T Consensus 104 ~~~~I~gl~~~--dg~Litc~~sG~l~~~~~k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdl 180 (412)
T KOG3881|consen 104 GTKSIKGLKLA--DGTLITCVSSGNLQVRHDKSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDL 180 (412)
T ss_pred ccccccchhhc--CCEEEEEecCCcEEEEeccCCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeec
Confidence 45566666554 3478888889999999988543 1233344433 4566666666 44566779888 88999999
Q ss_pred CCCCceeeeeeee------ccccceeEEEEecC--CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEcc
Q psy14815 164 GEEDEYECAAVIN------AHIQDVKKVRFHPF--DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR 235 (479)
Q Consensus 164 ~~~~~~~~~~~~~------~~~~~v~~l~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 235 (479)
...++.-...... .-.-.++++.|-+. ...|++++.-+.+++||.+.+. +++.++.....+++++...|
T Consensus 181 e~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qR---RPV~~fd~~E~~is~~~l~p 257 (412)
T KOG3881|consen 181 EQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQR---RPVAQFDFLENPISSTGLTP 257 (412)
T ss_pred ccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccC---cceeEeccccCcceeeeecC
Confidence 8763211111110 01224678889886 7899999999999999999655 46777877889999999999
Q ss_pred CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCC
Q psy14815 236 IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 236 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
+++++++|..-|.+..||++..... .+.+.+. .+.|+++..+|..+++++++-|..+||+|+++.
T Consensus 258 ~gn~Iy~gn~~g~l~~FD~r~~kl~--------------g~~~kg~-tGsirsih~hp~~~~las~GLDRyvRIhD~ktr 322 (412)
T KOG3881|consen 258 SGNFIYTGNTKGQLAKFDLRGGKLL--------------GCGLKGI-TGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTR 322 (412)
T ss_pred CCcEEEEecccchhheecccCceee--------------ccccCCc-cCCcceEEEcCCCceEEeeccceeEEEeecccc
Confidence 9999999999999999999665322 2335554 778999999999999999999999999999997
Q ss_pred CCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 316 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
+ ++...+ -.+.++++-+.++-...
T Consensus 323 k---------ll~kvY--vKs~lt~il~~~~~n~e 346 (412)
T KOG3881|consen 323 K---------LLHKVY--VKSRLTFILLRDDVNIE 346 (412)
T ss_pred h---------hhhhhh--hhccccEEEecCCcccc
Confidence 6 455443 34567888888775544
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.6e-14 Score=134.91 Aligned_cols=222 Identities=18% Similarity=0.178 Sum_probs=141.5
Q ss_pred ccCCcEEEEEECCCCCEEEEEECC---CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEE-EEeCCCcEEEEEe
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFD---ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSVWVWEV 163 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~i~vwd~ 163 (479)
.+...+.+.+|+|||+.|+..+.+ ..|.+||+.+++...+. ...+...+..|+|||+.|+ +.+.+|...+|.+
T Consensus 193 ~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~---~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~ 269 (427)
T PRK02889 193 SSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVA---NFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTV 269 (427)
T ss_pred cCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEee---cCCCCccceEECCCCCEEEEEEccCCCceEEEE
Confidence 456788999999999999887753 36999999988643332 2334566899999999876 5677888777765
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc-CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
+... .....+..+........|+|+|+.|+..+. +|...+|.+.........+ .. .........|+|+|++|+.
T Consensus 270 d~~~--~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~l-t~--~g~~~~~~~~SpDG~~Ia~ 344 (427)
T PRK02889 270 NADG--SGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRV-TF--TGSYNTSPRISPDGKLLAY 344 (427)
T ss_pred ECCC--CCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEE-ec--CCCCcCceEECCCCCEEEE
Confidence 4321 112334444455667889999998876654 4666677654222111112 12 2233446789999999987
Q ss_pred eeCCC---eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCC---eEEEcccCCCC
Q psy14815 243 CSDDA---TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD---AIRIFKENPEA 316 (479)
Q Consensus 243 ~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg---~i~vw~~~~~~ 316 (479)
.+.++ .|.+||+..+.. ..+.. ........|+|+|+.|+.++.++ .+.+.+.....
T Consensus 345 ~s~~~g~~~I~v~d~~~g~~----------------~~lt~--~~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~g~~ 406 (427)
T PRK02889 345 ISRVGGAFKLYVQDLATGQV----------------TALTD--TTRDESPSFAPNGRYILYATQQGGRSVLAAVSSDGRI 406 (427)
T ss_pred EEccCCcEEEEEEECCCCCe----------------EEccC--CCCccCceECCCCCEEEEEEecCCCEEEEEEECCCCc
Confidence 76554 699999854321 11211 12235679999999888877654 35555553322
Q ss_pred CCCCceeeEEEeccccccccceeEEEecCC
Q psy14815 317 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPV 346 (479)
Q Consensus 317 ~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 346 (479)
... ...+.+.+...+|||-
T Consensus 407 ----------~~~-l~~~~g~~~~p~wsp~ 425 (427)
T PRK02889 407 ----------KQR-LSVQGGDVREPSWGPF 425 (427)
T ss_pred ----------eEE-eecCCCCCCCCccCCC
Confidence 222 2245567778889874
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.5e-13 Score=128.38 Aligned_cols=290 Identities=14% Similarity=0.113 Sum_probs=169.3
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+.++......-..+.|+|||+++++++.||.|.++|+.+++.+.++.
T Consensus 29 ~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~--------------------------------- 75 (369)
T PF02239_consen 29 VARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIK--------------------------------- 75 (369)
T ss_dssp EEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE---------------------------------
T ss_pred EEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEe---------------------------------
Confidence 34444333333457899999999999999999999999888766552
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEE-CCCeEEEEECCCCeEEEeEEEeC-------CCCcEEEEEEcCCCCEEEEEeC-
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQFECNATLEG-------HENEVKSVTWSKNGQFLATCSR- 154 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~~~-------~~~~v~~l~~~~~~~~l~~~~~- 154 (479)
-.....++++++||++++++. ..+.+.++|.++.+ .+..+.. ....+.++..++....++..-.
T Consensus 76 -----~G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle--~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd 148 (369)
T PF02239_consen 76 -----VGGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLE--PVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKD 148 (369)
T ss_dssp ------SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT----EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETT
T ss_pred -----cCCCcceEEEcCCCCEEEEEecCCCceeEecccccc--ceeecccccccccccCCCceeEEecCCCCEEEEEEcc
Confidence 234568899999999998776 58999999999886 3344332 2346788888888886666555
Q ss_pred CCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEE-EcCCcEEEEecCCcccceEeeeeecCCCccEEEEEE
Q psy14815 155 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASA-SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF 233 (479)
Q Consensus 155 dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~ 233 (479)
.+.|.+.|....+.. ....+ ..........|+|++++++.+ ..+..|-++|..+.+.....-.....|..++..+-
T Consensus 149 ~~~I~vVdy~d~~~~-~~~~i-~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~p- 225 (369)
T PF02239_consen 149 TGEIWVVDYSDPKNL-KVTTI-KVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFP- 225 (369)
T ss_dssp TTEEEEEETTTSSCE-EEEEE-E--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEE-
T ss_pred CCeEEEEEecccccc-ceeee-cccccccccccCcccceeeecccccceeEEEeeccceEEEEeecccccccccccccc-
Confidence 478888887765432 22222 234456788999999987665 45678999998876541111111123555554442
Q ss_pred ccCC-CEEEEeeC-CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEE----eCCCeE
Q psy14815 234 DRIG-SRLATCSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA----CGDDAI 307 (479)
Q Consensus 234 ~~~~-~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~----~~dg~i 307 (479)
+|.. ...++... ...+-........ ......|+.+.++... +.+ ..+..+|+++++.+. ...++|
T Consensus 226 hp~~g~vw~~~~~~~~~~~~ig~~~v~-------v~d~~~wkvv~~I~~~-G~g-lFi~thP~s~~vwvd~~~~~~~~~v 296 (369)
T PF02239_consen 226 HPGFGPVWATSGLGYFAIPLIGTDPVS-------VHDDYAWKVVKTIPTQ-GGG-LFIKTHPDSRYVWVDTFLNPDADTV 296 (369)
T ss_dssp ETTTEEEEEEEBSSSSEEEEEE--TTT--------STTTBTSEEEEEE-S-SSS---EE--TT-SEEEEE-TT-SSHT-E
T ss_pred CCCcceEEeeccccceecccccCCccc-------cchhhcCeEEEEEECC-CCc-ceeecCCCCccEEeeccCCCCCceE
Confidence 3322 12222211 1112222221110 0112667888888875 556 788889999999988 445899
Q ss_pred EEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 308 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 308 ~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.++|.++.+ ....+..+....+..+.|++||+.+-.+.
T Consensus 297 ~viD~~tl~---------~~~~i~~~~~~~~~h~ef~~dG~~v~vS~ 334 (369)
T PF02239_consen 297 QVIDKKTLK---------VVKTITPGPGKRVVHMEFNPDGKEVWVSV 334 (369)
T ss_dssp EEEECCGTE---------EEE-HHHHHT--EEEEEE-TTSSEEEEEE
T ss_pred EEEECcCcc---------eeEEEeccCCCcEeccEECCCCCEEEEEE
Confidence 999999976 44444333334589999999999765543
|
... |
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.5e-14 Score=122.40 Aligned_cols=247 Identities=15% Similarity=0.208 Sum_probs=179.6
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEe-ccccccccccc-----------CCCccceEEEeecCCcEEE
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWV-MVIREPYEKLH-----------GLPVETSLRQLVEDKNIRL 69 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd-~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~i~~ 69 (479)
.+++.++||.+.|++...-|..+-+++.+.|.++|||- .+.++.-..+. .......+..+-..+++.-
T Consensus 15 ~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvte 94 (404)
T KOG1409|consen 15 ELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTE 94 (404)
T ss_pred hhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEE
Confidence 35678899999999999999888999999999999994 33444332222 2233445666666677666
Q ss_pred ecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEE
Q psy14815 70 WGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 149 (479)
Q Consensus 70 w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l 149 (479)
+.+...-++.... .....|...+..+-|+.....+++.+.|..+.---.+.++..--..+... .+++.+.-. +.
T Consensus 95 fs~sedfnkm~~~-r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~---~t~~~~d~~--~~ 168 (404)
T KOG1409|consen 95 FALSEDFNKMTFL-KDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETP---ASALQFDAL--YA 168 (404)
T ss_pred EEhhhhhhhcchh-hhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeecc---CCCCceeeE--EE
Confidence 6554322222222 12357899999999999889999999998777666666542222222211 112222211 66
Q ss_pred EEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEE
Q psy14815 150 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW 229 (479)
Q Consensus 150 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~ 229 (479)
+.|...|.|..-.+... ....+..+.+|...+.+++|.|....|++|..|..+.+||+..... ....+.+|...|.
T Consensus 169 fvGd~~gqvt~lr~~~~-~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g---~~~el~gh~~kV~ 244 (404)
T KOG1409|consen 169 FVGDHSGQITMLKLEQN-GCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKG---TAYELQGHNDKVQ 244 (404)
T ss_pred EecccccceEEEEEeec-CCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcc---eeeeeccchhhhh
Confidence 77777788877776554 2366788999999999999999999999999999999999976553 4567889999999
Q ss_pred EEEEccCCCEEEEeeCCCeEEEEeccCCC
Q psy14815 230 SLAFDRIGSRLATCSDDATVKIWKEYKPG 258 (479)
Q Consensus 230 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 258 (479)
.+..-+--+.+.+++.||.|.+|+++...
T Consensus 245 ~l~~~~~t~~l~S~~edg~i~~w~mn~~r 273 (404)
T KOG1409|consen 245 ALSYAQHTRQLISCGEDGGIVVWNMNVKR 273 (404)
T ss_pred hhhhhhhheeeeeccCCCeEEEEecccee
Confidence 99998888999999999999999986543
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.6e-14 Score=123.11 Aligned_cols=238 Identities=18% Similarity=0.316 Sum_probs=163.6
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe-CCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEEeCCCC
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE-GHENEVKSVTWSKN-GQFLATCSRDKSVWVWEVGEED 167 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~~~~-~~~l~~~~~dg~i~vwd~~~~~ 167 (479)
...+..++|++.-..++++..|-.|++||-.... ...++ ..+..|+|++|-|. ++.|++|+. +-|.+|......
T Consensus 98 ~~dlr~~aWhqH~~~fava~nddvVriy~ksst~---pt~Lks~sQrnvtclawRPlsaselavgCr-~gIciW~~s~tl 173 (445)
T KOG2139|consen 98 EIDLRGVAWHQHIIAFAVATNDDVVRIYDKSSTC---PTKLKSVSQRNVTCLAWRPLSASELAVGCR-AGICIWSDSRTL 173 (445)
T ss_pred hcceeeEeechhhhhhhhhccCcEEEEeccCCCC---CceecchhhcceeEEEeccCCcceeeeeec-ceeEEEEcCccc
Confidence 4567889999977778999999999999977642 23332 23568999999994 456777776 458899875421
Q ss_pred cee-----------eeeeeeccccceeEEEEecCCCEEEEEEc-CCcEEEEecCCcccceEeeeeecCCCccEEEEEEcc
Q psy14815 168 EYE-----------CAAVINAHIQDVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR 235 (479)
Q Consensus 168 ~~~-----------~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 235 (479)
... .+....+| .+|+++.|++||..+++++. |..|.|||.+++.. .++. ....+.++-+.|||
T Consensus 174 n~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~--~pL~--~~glgg~slLkwSP 248 (445)
T KOG2139|consen 174 NANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQK--IPLI--PKGLGGFSLLKWSP 248 (445)
T ss_pred ccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCc--cccc--ccCCCceeeEEEcC
Confidence 111 11122334 57999999999999999884 67899999998775 2222 23456788899999
Q ss_pred CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCC
Q psy14815 236 IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 236 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
|+.+|++++-|+..++|+.. ..|.+.+-..+ .+.|..-+|+|.|++|+.++. |.-++|.+...
T Consensus 249 dgd~lfaAt~davfrlw~e~--------------q~wt~erw~lg--sgrvqtacWspcGsfLLf~~s-gsp~lysl~f~ 311 (445)
T KOG2139|consen 249 DGDVLFAATCDAVFRLWQEN--------------QSWTKERWILG--SGRVQTACWSPCGSFLLFACS-GSPRLYSLTFD 311 (445)
T ss_pred CCCEEEEecccceeeeehhc--------------ccceecceecc--CCceeeeeecCCCCEEEEEEc-CCceEEEEeec
Confidence 99999999999999999652 34444444444 348999999999998766654 44557766544
Q ss_pred CCCC------CceeeEEEecc-----ccc---cccceeEEEecCCCCCCCcc
Q psy14815 316 AGDS------DMVSFDLVHTE-----HRA---HNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 316 ~~~~------~~~~~~~~~~~-----~~~---h~~~v~~~~~sp~~~~l~~~ 353 (479)
.+.. ......++..+ ..+ -.+.+.+++|.|.|.+|+..
T Consensus 312 ~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~ 363 (445)
T KOG2139|consen 312 GEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVI 363 (445)
T ss_pred CCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEE
Confidence 3221 11111111111 111 13678999999999999765
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.2e-13 Score=132.96 Aligned_cols=221 Identities=14% Similarity=0.128 Sum_probs=141.7
Q ss_pred ccccccccceEEEEECCCCCeEEEeeC---CCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGE---DKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
+.+..+...+.+.+|||||+.|+..+. +..+.+|++.+++....
T Consensus 192 ~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l--------------------------------- 238 (429)
T PRK03629 192 FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV--------------------------------- 238 (429)
T ss_pred EEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEc---------------------------------
Confidence 344456678889999999998886542 34677888765542111
Q ss_pred eEEeccccCCcEEEEEECCCCCEEEEE-ECCC--eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-Cc
Q psy14815 82 KAILSDGHQRTIRETAWSPCGNFIASA-SFDA--TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-KS 157 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~~~l~t~-~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-g~ 157 (479)
......+..++|+|||+.|+.. +.+| .|.+||+.+++.. .+..+...+....|+|||+.|+..+.+ +.
T Consensus 239 -----~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~---~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~ 310 (429)
T PRK03629 239 -----ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR---QVTDGRSNNTEPTWFPDSQNLAYTSDQAGR 310 (429)
T ss_pred -----cCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEE---EccCCCCCcCceEECCCCCEEEEEeCCCCC
Confidence 0112233457899999988865 3344 5889999988633 333344567889999999988777654 45
Q ss_pred EEEE--EeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcC---CcEEEEecCCcccceEeeeeecCCCccEEEEE
Q psy14815 158 VWVW--EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD---DTVKLFKEDKAEADWINFATLKSHTSTVWSLA 232 (479)
Q Consensus 158 i~vw--d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 232 (479)
..+| |+.++.. ..+...........|+|+|++|+..+.+ ..|.+||+.++.. . .+... .......
T Consensus 311 ~~Iy~~d~~~g~~----~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~--~---~Lt~~-~~~~~p~ 380 (429)
T PRK03629 311 PQVYKVNINGGAP----QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV--Q---VLTDT-FLDETPS 380 (429)
T ss_pred ceEEEEECCCCCe----EEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCe--E---EeCCC-CCCCCce
Confidence 5555 5554421 2223333445678999999998876643 3588899887653 2 22211 1234678
Q ss_pred EccCCCEEEEeeCCCe---EEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC
Q psy14815 233 FDRIGSRLATCSDDAT---VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 293 (479)
Q Consensus 233 ~~~~~~~l~s~~~dg~---i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~ 293 (479)
|+|||++|+.++.++. +.++++.. .....+.++ ...+...+|+|
T Consensus 381 ~SpDG~~i~~~s~~~~~~~l~~~~~~G----------------~~~~~l~~~-~~~~~~p~Wsp 427 (429)
T PRK03629 381 IAPNGTMVIYSSSQGMGSVLNLVSTDG----------------RFKARLPAT-DGQVKFPAWSP 427 (429)
T ss_pred ECCCCCEEEEEEcCCCceEEEEEECCC----------------CCeEECccC-CCCcCCcccCC
Confidence 9999999999887764 56666521 123444444 55677888887
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.6e-13 Score=117.13 Aligned_cols=294 Identities=14% Similarity=0.179 Sum_probs=188.2
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEeccccc-----ccccccCC------------------------CccceEEEe
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIRE-----PYEKLHGL------------------------PVETSLRQL 61 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~-----~~~~~~~~------------------------~~~~~~~~~ 61 (479)
.+-|.++.|..+|.+||||..+|.|.++.-+... ....++.| .....++..
T Consensus 25 adiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLls 104 (433)
T KOG1354|consen 25 ADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLS 104 (433)
T ss_pred hcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEe
Confidence 3568999999999999999999999999533211 11112111 123456677
Q ss_pred ecCCcEEEecCCCCCCce-------------------------------eeeEEeccccCCcEEEEEECCCCCEEEEEEC
Q psy14815 62 VEDKNIRLWGKESFGNKF-------------------------------TAKAILSDGHQRTIRETAWSPCGNFIASASF 110 (479)
Q Consensus 62 ~~~~~i~~w~~~~~~~~~-------------------------------~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~ 110 (479)
..|.++++|.+...+... .++......|.--|.++.++.|+..++++.
T Consensus 105 tNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSAD- 183 (433)
T KOG1354|consen 105 TNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSAD- 183 (433)
T ss_pred cCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeecc-
Confidence 889999999876532221 122334467888899999999999988876
Q ss_pred CCeEEEEECCCCe-EEEeEEEeCCC-----CcEEEEEEcC-CCCEEEEEeCCCcEEEEEeCCCCce-------------e
Q psy14815 111 DATTAVWDKRSGQ-FECNATLEGHE-----NEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDEY-------------E 170 (479)
Q Consensus 111 dg~i~iwd~~~~~-~~~~~~~~~~~-----~~v~~l~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~-------------~ 170 (479)
|=.|.+|+++--. .-.+..++.+. .-|++..|+| ..+.|+-.+..|+|++-|++..... .
T Consensus 184 dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~ 263 (433)
T KOG1354|consen 184 DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPS 263 (433)
T ss_pred ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCc
Confidence 5789999986322 12333444443 4588999999 4567888888999999999843100 0
Q ss_pred eeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCc------------c---EEEEEEcc
Q psy14815 171 CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTS------------T---VWSLAFDR 235 (479)
Q Consensus 171 ~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~------------~---v~~~~~~~ 235 (479)
...-+..--..|+.+.|+++|+++++-.. -+|++||+..... ++.+.+-|.. . -..++|+.
T Consensus 264 ~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~---pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg 339 (433)
T KOG1354|consen 264 SRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAK---PVETYPVHEYLRSKLCSLYENDAIFDKFECSWSG 339 (433)
T ss_pred chhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCC---cceEEeehHhHHHHHHHHhhccchhheeEEEEcC
Confidence 01112223346889999999999987654 5799999964332 3444433321 1 24678998
Q ss_pred CCCEEEEeeCCCeEEEEeccCCCCCCCCC-CCC----CCCceEEEEEEecc-------------ccccEEEEEecCCCCe
Q psy14815 236 IGSRLATCSDDATVKIWKEYKPGNSAGIP-TPD----NDSVWKCVCTLSGH-------------HGRTIYDISWCHLTDL 297 (479)
Q Consensus 236 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~-------------~~~~i~~l~~~~~~~~ 297 (479)
++.+++||+....+++++...+.....-. ... .....++.....+. ....+...+|+|....
T Consensus 340 ~~~~v~TGsy~n~frvf~~~~gsk~d~tl~asr~~~~~~~~~k~~~V~~~g~r~~~~~~vd~ldf~kkilh~aWhp~en~ 419 (433)
T KOG1354|consen 340 NDSYVMTGSYNNVFRVFNLARGSKEDFTLEASRKNMKPRKVLKLRLVSSSGKRKRDEISVDALDFRKKILHTAWHPKENS 419 (433)
T ss_pred CcceEecccccceEEEecCCCCcceeecccccccCCcccccccceeeecCCCccccccccchhhhhhHHHhhccCCccce
Confidence 88999999999999999965543321110 000 00111111111111 1224566789999988
Q ss_pred EEEEeCCCeEEEc
Q psy14815 298 IATACGDDAIRIF 310 (479)
Q Consensus 298 l~~~~~dg~i~vw 310 (479)
+|.+..+ .+++|
T Consensus 420 ia~aatn-nlyif 431 (433)
T KOG1354|consen 420 IAVAATN-NLYIF 431 (433)
T ss_pred eeeeecC-ceEEe
Confidence 8887654 55554
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.2e-14 Score=129.49 Aligned_cols=225 Identities=16% Similarity=0.142 Sum_probs=150.8
Q ss_pred EEEEEECCCCCEEEEEECCCeEEEEECCCCeEE----EeEEEeCCCCcEEEEEE-----cCCCCEEEEEeCCCcEEEEEe
Q psy14815 93 IRETAWSPCGNFIASASFDATTAVWDKRSGQFE----CNATLEGHENEVKSVTW-----SKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 93 v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~----~~~~~~~~~~~v~~l~~-----~~~~~~l~~~~~dg~i~vwd~ 163 (479)
+.....+-.|++|+..-. ..+.+|+.+.+... ....+++ ....|=+| .+++--++.|-.-|.+.+.|.
T Consensus 126 ~~~~~~~~~gd~lcFnvg-~~lyv~~~~g~~~~~~pi~k~~y~g--t~P~cHdfn~~~a~~~g~dllIGf~tGqvq~idp 202 (636)
T KOG2394|consen 126 VTNTNQSGKGDRLCFNVG-RELYVYSYRGAADLSKPIDKREYKG--TSPTCHDFNSFTATPKGLDLLIGFTTGQVQLIDP 202 (636)
T ss_pred eeeccccCCCCEEEEecC-CeEEEEEccCcchhccchhhhcccC--CCCceecccccccCCCCcceEEeeccCceEEecc
Confidence 334444445677766543 46889988753211 1112222 12234444 345667888989999999988
Q ss_pred CCCCceeee-eeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcc----cc--------------------eEe
Q psy14815 164 GEEDEYECA-AVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAE----AD--------------------WIN 217 (479)
Q Consensus 164 ~~~~~~~~~-~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~----~~--------------------~~~ 217 (479)
...+..+.+ ......+..++|+.|-| +...++.+-.+|.+.+||....- +. ..+
T Consensus 203 ~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNP 282 (636)
T KOG2394|consen 203 INFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNP 282 (636)
T ss_pred hhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCc
Confidence 763211100 01112346799999999 44677778889999999753210 00 011
Q ss_pred eeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCe
Q psy14815 218 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDL 297 (479)
Q Consensus 218 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~ 297 (479)
+..+..-.+.|...+|+|||++||+.+.||.+||||..... ++..++.- -....|++|+|||+|
T Consensus 283 v~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~e---------------Llg~mkSY-FGGLLCvcWSPDGKy 346 (636)
T KOG2394|consen 283 VARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQE---------------LLGVMKSY-FGGLLCVCWSPDGKY 346 (636)
T ss_pred cceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHH---------------HHHHHHhh-ccceEEEEEcCCccE
Confidence 22222234578899999999999999999999999984432 22222222 447899999999999
Q ss_pred EEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCC
Q psy14815 298 IATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV 346 (479)
Q Consensus 298 l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 346 (479)
|++|++|.-|.||.+..++ +...-.+|.+.|+.|+|.|-
T Consensus 347 IvtGGEDDLVtVwSf~erR----------VVARGqGHkSWVs~VaFDpy 385 (636)
T KOG2394|consen 347 IVTGGEDDLVTVWSFEERR----------VVARGQGHKSWVSVVAFDPY 385 (636)
T ss_pred EEecCCcceEEEEEeccce----------EEEeccccccceeeEeeccc
Confidence 9999999999999999887 55556799999999999984
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=1e-13 Score=118.84 Aligned_cols=295 Identities=17% Similarity=0.224 Sum_probs=181.6
Q ss_pred cceEEEEECCCCCeEEEe-eCCCcEEEEecccccccccccCCC----------cc-ceEEEeecCCcEEEecCCCCCCce
Q psy14815 12 GRVWNVSWNPQGTMISSC-GEDKNIRLWVMVIREPYEKLHGLP----------VE-TSLRQLVEDKNIRLWGKESFGNKF 79 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~-~~dg~v~iwd~~~~~~~~~~~~~~----------~~-~~~~~~~~~~~i~~w~~~~~~~~~ 79 (479)
+.|.-+.|..|..+++.+ ..|+.|.+|++...+-..++...+ ++ ..+....-+-.|.+|.+.+.
T Consensus 49 dki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~---- 124 (447)
T KOG4497|consen 49 DKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQ---- 124 (447)
T ss_pred HHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccc----
Confidence 567889999988877765 678899999998877766665543 33 23333444567888988732
Q ss_pred eeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCC-CeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcE
Q psy14815 80 TAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS-GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 158 (479)
Q Consensus 80 ~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i 158 (479)
......-....+..++|+|||++.+.++.-......++.. ..+.....++..+-..+.+.|+|||+.|++
T Consensus 125 --~~~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laV------- 195 (447)
T KOG4497|consen 125 --KGYLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAV------- 195 (447)
T ss_pred --eeEEecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEE-------
Confidence 2222233445678999999999988877532111111111 111222334444455677888888776654
Q ss_pred EEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcc--------------------------
Q psy14815 159 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE-------------------------- 212 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~-------------------------- 212 (479)
||---. ..+..+ .-.-.+..++|+|.+++|+.|+.|+.+|+.+--+-+
T Consensus 196 --wd~~Le---ykv~aY-e~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~ 269 (447)
T KOG4497|consen 196 --WDNVLE---YKVYAY-ERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSI 269 (447)
T ss_pred --ecchhh---heeeee-eeccceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcch
Confidence 442211 000001 112346677888888888888888877775421000
Q ss_pred ------------------------------cceEeeeeec------CCCccEEEEEEccCCCEEEEeeCC--CeEEEEec
Q psy14815 213 ------------------------------ADWINFATLK------SHTSTVWSLAFDRIGSRLATCSDD--ATVKIWKE 254 (479)
Q Consensus 213 ------------------------------~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~s~~~d--g~i~iwd~ 254 (479)
..+..+..++ ...-.+.-++|++|..++++-.+. +.+-+||+
T Consensus 270 ~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdl 349 (447)
T KOG4497|consen 270 VQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDL 349 (447)
T ss_pred hhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEec
Confidence 0000111111 123356779999999999887543 57999998
Q ss_pred cCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEecccccc
Q psy14815 255 YKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH 334 (479)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h 334 (479)
+..+. -..+. +..+|....|+|....|+.+.....+++|...... ..... ..
T Consensus 350 q~l~l---------------~avLi--Qk~piraf~WdP~~prL~vctg~srLY~W~psg~~----------~V~vP-~~ 401 (447)
T KOG4497|consen 350 QNLKL---------------HAVLI--QKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPR----------VVGVP-KK 401 (447)
T ss_pred hhhhh---------------hhhhh--hccceeEEEeCCCCceEEEEcCCceEEEEcCCCce----------EEecC-CC
Confidence 54422 12222 25689999999999989888888889999877643 33332 22
Q ss_pred ccceeEEEecCCCCCCCcc
Q psy14815 335 NQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 335 ~~~v~~~~~sp~~~~l~~~ 353 (479)
.-.|..+.|.-+|..++..
T Consensus 402 GF~i~~l~W~~~g~~i~l~ 420 (447)
T KOG4497|consen 402 GFNIQKLQWLQPGEFIVLC 420 (447)
T ss_pred CceeeeEEecCCCcEEEEE
Confidence 3578999999999887443
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.58 E-value=9.7e-11 Score=109.71 Aligned_cols=214 Identities=14% Similarity=0.228 Sum_probs=142.2
Q ss_pred cCCcEEEEEECCCCCEEEEEEC-CCeEEEEECCC-CeEEEeEEEe-----------CCCCcEEEEEEcCCCCEEEEEeC-
Q psy14815 89 HQRTIRETAWSPCGNFIASASF-DATTAVWDKRS-GQFECNATLE-----------GHENEVKSVTWSKNGQFLATCSR- 154 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~-dg~i~iwd~~~-~~~~~~~~~~-----------~~~~~v~~l~~~~~~~~l~~~~~- 154 (479)
.......++++|++++|+++.. +|.|.++++.. +......... .......++.|+|+++++++...
T Consensus 85 ~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG 164 (345)
T PF10282_consen 85 GGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLG 164 (345)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETT
T ss_pred CCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecC
Confidence 3456677999999999999875 78999999986 4433222111 12345789999999998888754
Q ss_pred CCcEEEEEeCCCC-ceeeeeeee-ccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeeeecC------CC
Q psy14815 155 DKSVWVWEVGEED-EYECAAVIN-AHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFATLKS------HT 225 (479)
Q Consensus 155 dg~i~vwd~~~~~-~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~------~~ 225 (479)
...|.+|++.... .+.....+. ......+.+.|+|+++++.+.. .++.|.+|++......+..+..... ..
T Consensus 165 ~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~ 244 (345)
T PF10282_consen 165 ADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGE 244 (345)
T ss_dssp TTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSS
T ss_pred CCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeecccccccc
Confidence 4579999998764 122222222 3345578999999998876665 5678999998833322233332221 12
Q ss_pred ccEEEEEEccCCCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeC-
Q psy14815 226 STVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG- 303 (479)
Q Consensus 226 ~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~- 303 (479)
.....++++|+|++|+++. .++.|.+|++.... ...+.+..+... +...+.++++|+|++|++++.
T Consensus 245 ~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~-----------g~l~~~~~~~~~-G~~Pr~~~~s~~g~~l~Va~~~ 312 (345)
T PF10282_consen 245 NAPAEIAISPDGRFLYVSNRGSNSISVFDLDPAT-----------GTLTLVQTVPTG-GKFPRHFAFSPDGRYLYVANQD 312 (345)
T ss_dssp SSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTT-----------TTEEEEEEEEES-SSSEEEEEE-TTSSEEEEEETT
T ss_pred CCceeEEEecCCCEEEEEeccCCEEEEEEEecCC-----------CceEEEEEEeCC-CCCccEEEEeCCCCEEEEEecC
Confidence 2578999999999987655 56789999984321 122344444432 556899999999999988874
Q ss_pred CCeEEEcccCC
Q psy14815 304 DDAIRIFKENP 314 (479)
Q Consensus 304 dg~i~vw~~~~ 314 (479)
++.|.+|+++.
T Consensus 313 s~~v~vf~~d~ 323 (345)
T PF10282_consen 313 SNTVSVFDIDP 323 (345)
T ss_dssp TTEEEEEEEET
T ss_pred CCeEEEEEEeC
Confidence 67999998753
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.2e-12 Score=125.06 Aligned_cols=197 Identities=18% Similarity=0.188 Sum_probs=131.3
Q ss_pred ccCCcEEEEEECCCCCEEEEEECC---CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEE-EeCCC--cEEEE
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFD---ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT-CSRDK--SVWVW 161 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~-~~~dg--~i~vw 161 (479)
.+...+...+|+|+|++|+.++.+ ..|.+||+.+++... +..+...+.++.|+||++.|+. .+.++ .|.+|
T Consensus 187 ~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~---~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~ 263 (417)
T TIGR02800 187 RSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK---VASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVM 263 (417)
T ss_pred cCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE---eecCCCCccceEECCCCCEEEEEECCCCCccEEEE
Confidence 455678899999999999988754 489999999886332 3334456678999999987764 44444 58888
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc-CC--cEEEEecCCcccceEeeeeecCCCccEEEEEEccCCC
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DD--TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS 238 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 238 (479)
|+.++.. ..+..+........|+|+++.|+..+. ++ .|.++|+.+++. ..+..+...+....|+|+++
T Consensus 264 d~~~~~~----~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~-----~~l~~~~~~~~~~~~spdg~ 334 (417)
T TIGR02800 264 DLDGKQL----TRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEV-----RRLTFRGGYNASPSWSPDGD 334 (417)
T ss_pred ECCCCCE----EECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCE-----EEeecCCCCccCeEECCCCC
Confidence 8877532 223334444556789999998877654 33 577778765442 23333455667889999999
Q ss_pred EEEEeeCCC---eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCC---eEEEccc
Q psy14815 239 RLATCSDDA---TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD---AIRIFKE 312 (479)
Q Consensus 239 ~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg---~i~vw~~ 312 (479)
+++.++.++ .|.+||+..... ..+.. ........|+|++++|+..+.++ .+++.+.
T Consensus 335 ~i~~~~~~~~~~~i~~~d~~~~~~----------------~~l~~--~~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~ 396 (417)
T TIGR02800 335 LIAFVHREGGGFNIAVMDLDGGGE----------------RVLTD--TGLDESPSFAPNGRMILYATTRGGRGVLGLVST 396 (417)
T ss_pred EEEEEEccCCceEEEEEeCCCCCe----------------EEccC--CCCCCCceECCCCCEEEEEEeCCCcEEEEEEEC
Confidence 998887765 788888744211 11111 11234568999999888877654 3555554
Q ss_pred CC
Q psy14815 313 NP 314 (479)
Q Consensus 313 ~~ 314 (479)
..
T Consensus 397 ~g 398 (417)
T TIGR02800 397 DG 398 (417)
T ss_pred CC
Confidence 33
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.6e-13 Score=129.56 Aligned_cols=200 Identities=16% Similarity=0.157 Sum_probs=129.5
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCC---CcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGED---KNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
.+.+..|...+.+.+|+|||+.|+..+.+ ..|.+||+.+++....
T Consensus 196 ~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l-------------------------------- 243 (433)
T PRK04922 196 PQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELV-------------------------------- 243 (433)
T ss_pred ceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEe--------------------------------
Confidence 34455667778888899998888877633 3577777765442110
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEE-EECCC--eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-CC
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIAS-ASFDA--TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DK 156 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t-~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg 156 (479)
........+.+|+|||+.++. .+.+| .|.+||+.+++. ..+..+.......+|+|||+.|+.++. +|
T Consensus 244 ------~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~---~~lt~~~~~~~~~~~spDG~~l~f~sd~~g 314 (433)
T PRK04922 244 ------ASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQL---TRLTNHFGIDTEPTWAPDGKSIYFTSDRGG 314 (433)
T ss_pred ------ccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCe---EECccCCCCccceEECCCCCEEEEEECCCC
Confidence 112233457899999987764 45555 699999998863 334445445567899999998887764 45
Q ss_pred c--EEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCC---cEEEEecCCcccceEeeeeecCCCccEEEE
Q psy14815 157 S--VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD---TVKLFKEDKAEADWINFATLKSHTSTVWSL 231 (479)
Q Consensus 157 ~--i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~ 231 (479)
. |.++|+.+++. + .+..+.......+|+|+|+.|+..+.++ .|.+||+.++.. ..+. +.......
T Consensus 315 ~~~iy~~dl~~g~~-~---~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~-----~~Lt-~~~~~~~p 384 (433)
T PRK04922 315 RPQIYRVAASGGSA-E---RLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSV-----RTLT-PGSLDESP 384 (433)
T ss_pred CceEEEEECCCCCe-E---EeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCe-----EECC-CCCCCCCc
Confidence 5 55556655431 1 1222233445789999999998776443 599999976653 1222 22234567
Q ss_pred EEccCCCEEEEeeCC---CeEEEEec
Q psy14815 232 AFDRIGSRLATCSDD---ATVKIWKE 254 (479)
Q Consensus 232 ~~~~~~~~l~s~~~d---g~i~iwd~ 254 (479)
.|+|+|++++..+.+ +.|.++++
T Consensus 385 ~~spdG~~i~~~s~~~g~~~L~~~~~ 410 (433)
T PRK04922 385 SFAPNGSMVLYATREGGRGVLAAVST 410 (433)
T ss_pred eECCCCCEEEEEEecCCceEEEEEEC
Confidence 899999988776653 35666766
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.3e-13 Score=118.42 Aligned_cols=159 Identities=13% Similarity=0.159 Sum_probs=129.5
Q ss_pred CcEEEEEECCCC-CEEEEEECC--CeEEEEECCCCeEEEeEEEeCC---------CCcEEEEEEcCC--CCEEEEEeCCC
Q psy14815 91 RTIRETAWSPCG-NFIASASFD--ATTAVWDKRSGQFECNATLEGH---------ENEVKSVTWSKN--GQFLATCSRDK 156 (479)
Q Consensus 91 ~~v~~v~~~~~~-~~l~t~~~d--g~i~iwd~~~~~~~~~~~~~~~---------~~~v~~l~~~~~--~~~l~~~~~dg 156 (479)
.++..+.-++.. ..+++|+.. ..+.|||+++.+ .+..-+.- .-.++++.|.+. ...|++++.-+
T Consensus 149 ~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~--qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~h 226 (412)
T KOG3881|consen 149 PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSK--QIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYH 226 (412)
T ss_pred CceeeeccCCCCCceEecCchhcccceeeeecccce--eeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecce
Confidence 566666666644 456668888 889999999874 33332211 124678889886 78999999999
Q ss_pred cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC
Q psy14815 157 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 236 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 236 (479)
.+++||.+.+. +++..+..-..+++++...|.++++++|..-|.+..||++++.. ....+.+-.+.+.++..+|.
T Consensus 227 qvR~YDt~~qR--RPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl---~g~~~kg~tGsirsih~hp~ 301 (412)
T KOG3881|consen 227 QVRLYDTRHQR--RPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKL---LGCGLKGITGSIRSIHCHPT 301 (412)
T ss_pred eEEEecCcccC--cceeEeccccCcceeeeecCCCcEEEEecccchhheecccCcee---eccccCCccCCcceEEEcCC
Confidence 99999999665 66677777788999999999999999999999999999998764 34457888999999999999
Q ss_pred CCEEEEeeCCCeEEEEeccC
Q psy14815 237 GSRLATCSDDATVKIWKEYK 256 (479)
Q Consensus 237 ~~~l~s~~~dg~i~iwd~~~ 256 (479)
.+++++++-|..|||+|+.+
T Consensus 302 ~~~las~GLDRyvRIhD~kt 321 (412)
T KOG3881|consen 302 HPVLASCGLDRYVRIHDIKT 321 (412)
T ss_pred CceEEeeccceeEEEeeccc
Confidence 99999999999999999855
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.1e-13 Score=128.76 Aligned_cols=194 Identities=14% Similarity=0.157 Sum_probs=125.2
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCC---CcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGED---KNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
+.+..+...+.+.+|+|||+.|+..+.+ ..|.+||+.+++....
T Consensus 189 ~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l--------------------------------- 235 (427)
T PRK02889 189 QSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVV--------------------------------- 235 (427)
T ss_pred eEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEe---------------------------------
Confidence 3455677888999999999988877643 3488888766543210
Q ss_pred eEEeccccCCcEEEEEECCCCCEEEE-EECCCeEEEE--ECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-CCc
Q psy14815 82 KAILSDGHQRTIRETAWSPCGNFIAS-ASFDATTAVW--DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DKS 157 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~~~l~t-~~~dg~i~iw--d~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~ 157 (479)
......+.+.+|+|||+.|+. .+.+|...|| |+.++. ...+..+........|+|||+.|+..+. +|.
T Consensus 236 -----~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~---~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~ 307 (427)
T PRK02889 236 -----ANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG---LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGA 307 (427)
T ss_pred -----ecCCCCccceEECCCCCEEEEEEccCCCceEEEEECCCCC---cEECCCCCCCCcCeEEcCCCCEEEEEecCCCC
Confidence 112234567899999988874 5667766665 555553 2344445555667899999998876654 567
Q ss_pred EEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCC---cEEEEecCCcccceEeeeeecCCCccEEEEEEc
Q psy14815 158 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD---TVKLFKEDKAEADWINFATLKSHTSTVWSLAFD 234 (479)
Q Consensus 158 i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~ 234 (479)
..+|.+..... . ...+..........+|+|+|++|+..+.++ .|.+||+.++.. ..+... .......|+
T Consensus 308 ~~Iy~~~~~~g-~-~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~-----~~lt~~-~~~~~p~~s 379 (427)
T PRK02889 308 PQIYRMPASGG-A-AQRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQV-----TALTDT-TRDESPSFA 379 (427)
T ss_pred cEEEEEECCCC-c-eEEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCe-----EEccCC-CCccCceEC
Confidence 77776643211 1 111111222344678999999998877654 599999987653 122222 234578999
Q ss_pred cCCCEEEEeeCCC
Q psy14815 235 RIGSRLATCSDDA 247 (479)
Q Consensus 235 ~~~~~l~s~~~dg 247 (479)
|+|++|+.++.++
T Consensus 380 pdg~~l~~~~~~~ 392 (427)
T PRK02889 380 PNGRYILYATQQG 392 (427)
T ss_pred CCCCEEEEEEecC
Confidence 9999988776544
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.5e-13 Score=113.13 Aligned_cols=148 Identities=20% Similarity=0.344 Sum_probs=104.2
Q ss_pred EEEEECCCCCEEEEEEC----------CCeEEEEECCCCeEEEeEEEeC-CCCcEEEEEEcCCCCEEEEE--eCCCcEEE
Q psy14815 94 RETAWSPCGNFIASASF----------DATTAVWDKRSGQFECNATLEG-HENEVKSVTWSKNGQFLATC--SRDKSVWV 160 (479)
Q Consensus 94 ~~v~~~~~~~~l~t~~~----------dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~~~--~~dg~i~v 160 (479)
..+.|+|+|++|+.-.. -+...+|.++.... ....+.- ..++|.+++|+|+|+.|++. ..++.|.+
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~-~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~l 87 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNI-PVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTL 87 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCC-ccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEE
Confidence 45789999987765433 13455555533221 2223322 34579999999999987655 45679999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcC---CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD---DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG 237 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 237 (479)
||++. ..+..+ +...++.+.|+|+|++|++++.+ |.|.+||.++.+ .+.+.. | ..++.++|+|+|
T Consensus 88 yd~~~----~~i~~~--~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~----~i~~~~-~-~~~t~~~WsPdG 155 (194)
T PF08662_consen 88 YDVKG----KKIFSF--GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKK----KISTFE-H-SDATDVEWSPDG 155 (194)
T ss_pred EcCcc----cEeEee--cCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCE----Eeeccc-c-CcEEEEEEcCCC
Confidence 99973 333333 34667899999999999998753 679999999544 344433 3 347899999999
Q ss_pred CEEEEeeC------CCeEEEEec
Q psy14815 238 SRLATCSD------DATVKIWKE 254 (479)
Q Consensus 238 ~~l~s~~~------dg~i~iwd~ 254 (479)
++|++++. |+.++||+.
T Consensus 156 r~~~ta~t~~r~~~dng~~Iw~~ 178 (194)
T PF08662_consen 156 RYLATATTSPRLRVDNGFKIWSF 178 (194)
T ss_pred CEEEEEEeccceeccccEEEEEe
Confidence 99998874 678899987
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.5e-13 Score=132.18 Aligned_cols=267 Identities=14% Similarity=0.159 Sum_probs=188.1
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCc-------------cceEEEeecCCcEEEecCCCCCC
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPV-------------ETSLRQLVEDKNIRLWGKESFGN 77 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~i~~w~~~~~~~ 77 (479)
-+++++..+-. ++|+.|. --.+.+||+.++..+..+..... ...++.+.....+..=+..
T Consensus 7 ~~~l~~~~~~~--~~llag~-gp~i~~yd~~s~~li~~~~~~~~~~~H~~e~~~~l~~~~~v~~~~~~~v~~~~~~---- 79 (967)
T KOG0974|consen 7 LGPLNLPQLVS--DYLLAGS-GPEILVYDLSSGCLIRHLIQSKILEVHRGEGKVKLLSGKIVTCAKSDEVYVKEAS---- 79 (967)
T ss_pred cccccchhhcc--ceeeecC-CCceEEeeCCchhHhhhhhhhcccccccccccceeccceEEEEEeecceeecchh----
Confidence 34555555543 5666664 44699999998887665543211 1112222211111111000
Q ss_pred ceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCc-----EEEEEEcCCCCEEEEE
Q psy14815 78 KFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE-----VKSVTWSKNGQFLATC 152 (479)
Q Consensus 78 ~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-----v~~l~~~~~~~~l~~~ 152 (479)
......-...|....+..+...++.++.++.+.+||...+. ...... +... ..-+.++++.-++++|
T Consensus 80 -----~~~~~~~s~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~--~~~~i~-~~er~~l~~~~~~g~s~~~~~i~~g 151 (967)
T KOG0974|consen 80 -----NQIIERFSDWIFGAKLFEENKKIALVTSRNSLLIRDSKNSS--VLSKIQ-SDERCTLYSSLIIGDSAEELYIASG 151 (967)
T ss_pred -----hhhhhhccccccccchhhhcceEEEEEcCceEEEEecccCc--eehhcC-CCceEEEEeEEEEeccCcEEEEEec
Confidence 00011223344445555567889999999999999998764 222222 2221 1223345677789999
Q ss_pred eCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEE
Q psy14815 153 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLA 232 (479)
Q Consensus 153 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 232 (479)
+.-+.|.+|+....+. -..+.+|.+.|-++.|+.+|+++++.++|.++++|++.+.+. ......+|+..|+.++
T Consensus 152 sv~~~iivW~~~~dn~---p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~---~~~~~fgHsaRvw~~~ 225 (967)
T KOG0974|consen 152 SVFGEIIVWKPHEDNK---PIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREV---LGCTGFGHSARVWACC 225 (967)
T ss_pred cccccEEEEeccccCC---cceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccc---cCcccccccceeEEEE
Confidence 9999999999985432 226889999999999999999999999999999999998774 2246678999999999
Q ss_pred EccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 233 FDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 233 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
|.|+ .+++++.|.+.++|+.. ...+..+.+|....|..++..++...+++++.|+.+++|++
T Consensus 226 ~~~n--~i~t~gedctcrvW~~~----------------~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l 287 (967)
T KOG0974|consen 226 FLPN--RIITVGEDCTCRVWGVN----------------GTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDL 287 (967)
T ss_pred eccc--eeEEeccceEEEEEecc----------------cceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhh
Confidence 9988 89999999999999642 23345888888899999999999999999999999999999
Q ss_pred CCCC
Q psy14815 313 NPEA 316 (479)
Q Consensus 313 ~~~~ 316 (479)
....
T Consensus 288 ~~r~ 291 (967)
T KOG0974|consen 288 NGRG 291 (967)
T ss_pred hccc
Confidence 7764
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.9e-12 Score=108.88 Aligned_cols=177 Identities=13% Similarity=0.161 Sum_probs=125.6
Q ss_pred CcEEEEecccccccccccCC------CccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEE
Q psy14815 33 KNIRLWVMVIREPYEKLHGL------PVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA 106 (479)
Q Consensus 33 g~v~iwd~~~~~~~~~~~~~------~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~ 106 (479)
..|.|||=....++.++... ......+...-.+.|.+|.....-. ...............+++-..+..+||
T Consensus 75 NkviIWDD~k~~~i~el~f~~~I~~V~l~r~riVvvl~~~I~VytF~~n~k--~l~~~et~~NPkGlC~~~~~~~k~~La 152 (346)
T KOG2111|consen 75 NKVIIWDDLKERCIIELSFNSEIKAVKLRRDRIVVVLENKIYVYTFPDNPK--LLHVIETRSNPKGLCSLCPTSNKSLLA 152 (346)
T ss_pred ceEEEEecccCcEEEEEEeccceeeEEEcCCeEEEEecCeEEEEEcCCChh--heeeeecccCCCceEeecCCCCceEEE
Confidence 57999996666665554432 2234455666788999998873222 222222233344454444444555666
Q ss_pred EEE-CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc-EEEEEeCCCCceeeeeeeeccccceeE
Q psy14815 107 SAS-FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS-VWVWEVGEEDEYECAAVINAHIQDVKK 184 (479)
Q Consensus 107 t~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~v~~ 184 (479)
.-+ .-|.|+|-|+...+......+.+|.+.|.|++.+.+|..+||+|..|+ ||+||..++......+.-. ....|.+
T Consensus 153 fPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~-d~A~iy~ 231 (346)
T KOG2111|consen 153 FPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGV-DRADIYC 231 (346)
T ss_pred cCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCC-chheEEE
Confidence 543 458999999987753334678899999999999999999999999997 8999999996544433322 2356999
Q ss_pred EEEecCCCEEEEEEcCCcEEEEecCCcc
Q psy14815 185 VRFHPFDNILASASYDDTVKLFKEDKAE 212 (479)
Q Consensus 185 l~~~~~~~~l~~~~~dg~i~i~d~~~~~ 212 (479)
++|||++.+|++++..|++.+|.++...
T Consensus 232 iaFSp~~s~LavsSdKgTlHiF~l~~~~ 259 (346)
T KOG2111|consen 232 IAFSPNSSWLAVSSDKGTLHIFSLRDTE 259 (346)
T ss_pred EEeCCCccEEEEEcCCCeEEEEEeecCC
Confidence 9999999999999999999999987543
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.54 E-value=9.9e-13 Score=111.56 Aligned_cols=151 Identities=17% Similarity=0.276 Sum_probs=106.5
Q ss_pred EEEEEcCCCCEEEEEeC----------CCcEEEEEeCCCCceeeeeeee-ccccceeEEEEecCCCEEEEE--EcCCcEE
Q psy14815 138 KSVTWSKNGQFLATCSR----------DKSVWVWEVGEEDEYECAAVIN-AHIQDVKKVRFHPFDNILASA--SYDDTVK 204 (479)
Q Consensus 138 ~~l~~~~~~~~l~~~~~----------dg~i~vwd~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~--~~dg~i~ 204 (479)
..+.|+++|++|++-.. -|...+|.++.... ....+. ...++|.+++|+|+|+.+++. ..++.|.
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~--~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ 86 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNI--PVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVT 86 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCC--ccceeeccCCCceEEEEECcCCCEEEEEEccCCcccE
Confidence 46788898887665443 23466677654432 222222 234569999999999887654 4567999
Q ss_pred EEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeC---CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc
Q psy14815 205 LFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD---DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH 281 (479)
Q Consensus 205 i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (479)
+||++. ..+..+ +...+..+.|+|+|++|++++. .|.|.+||.+.. +.+.+..
T Consensus 87 lyd~~~-----~~i~~~--~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~---------------~~i~~~~-- 142 (194)
T PF08662_consen 87 LYDVKG-----KKIFSF--GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKK---------------KKISTFE-- 142 (194)
T ss_pred EEcCcc-----cEeEee--cCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCC---------------EEeeccc--
Confidence 999972 224444 3567789999999999999874 467999998532 3344443
Q ss_pred ccccEEEEEecCCCCeEEEEeC------CCeEEEcccCCC
Q psy14815 282 HGRTIYDISWCHLTDLIATACG------DDAIRIFKENPE 315 (479)
Q Consensus 282 ~~~~i~~l~~~~~~~~l~~~~~------dg~i~vw~~~~~ 315 (479)
...++.++|+|+|++++++.. |+.++||+....
T Consensus 143 -~~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~G~ 181 (194)
T PF08662_consen 143 -HSDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQGR 181 (194)
T ss_pred -cCcEEEEEEcCCCCEEEEEEeccceeccccEEEEEecCe
Confidence 235789999999999999864 788999998754
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.6e-13 Score=123.52 Aligned_cols=275 Identities=19% Similarity=0.209 Sum_probs=197.5
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC--CCCEEEEEeCCCcEEEEEe
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK--NGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~~~~~dg~i~vwd~ 163 (479)
+.+|.+.|..+.|+..|..+++|+.|..|.+||...++. ......+|...|....|-| +.+.+++++.||.+++=.+
T Consensus 138 L~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~-~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i 216 (559)
T KOG1334|consen 138 LNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSP-KLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEI 216 (559)
T ss_pred ccCCCCccceeeecccCceeeccCccceEEeehhhccCc-ccccccccccchhhhhccCCCCCcCceeccccCceeeeee
Confidence 468999999999999999999999999999999998873 2344467999999888988 4567999999999999888
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCC-CEEEEEEcCCcEEEEecCCcccceEeeeeecCCCc---cEEEEEEccCCC-
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTS---TVWSLAFDRIGS- 238 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~- 238 (479)
...........+..|.++|..++.-|+. ..|.+++.|+.+.-+|+++........ ....+.. ...+++.+|...
T Consensus 217 ~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~-cr~~~~~~~v~L~~Ia~~P~nt~ 295 (559)
T KOG1334|consen 217 LETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFV-CREADEKERVGLYTIAVDPRNTN 295 (559)
T ss_pred ccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceee-eeccCCccceeeeeEecCCCCcc
Confidence 7766556567788899999999999955 678999999999999999876533333 3333444 568888888765
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCC
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 318 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 318 (479)
.+++++.|-.+++||.+........-. ... -+...+.......|++++|+.++.-|.++-.|-.|+++.-..+.+.
T Consensus 296 ~faVgG~dqf~RvYD~R~~~~e~~n~~---~~~-f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~ 371 (559)
T KOG1334|consen 296 EFAVGGSDQFARVYDQRRIDKEENNGV---LDK-FCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGS 371 (559)
T ss_pred ccccCChhhhhhhhcccchhhccccch---hhh-cCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCC
Confidence 789999999999999876544311100 000 0111111223557999999987776666667889999965544432
Q ss_pred CCcee---eEEEecccccccc--ceeEEE-ecCCCCCCCccc---------ccHHHHHHHHHH
Q psy14815 319 SDMVS---FDLVHTEHRAHNQ--DVNCVA-WNPVVPEPQKTN---------LTLHDVVRRLEA 366 (479)
Q Consensus 319 ~~~~~---~~~~~~~~~~h~~--~v~~~~-~sp~~~~l~~~~---------~~~~~~~~~l~~ 366 (479)
...+. -..+..++++|.. .|..+- |-|...|+.+++ -+..++++.|+.
T Consensus 372 ~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~Meg 434 (559)
T KOG1334|consen 372 EPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEG 434 (559)
T ss_pred CCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhc
Confidence 11111 1334455778863 455554 678888886553 355678888774
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.9e-12 Score=124.21 Aligned_cols=202 Identities=16% Similarity=0.110 Sum_probs=137.0
Q ss_pred CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC---CCcEEEEEeCCCCceeeeeeeeccccceeEEEEe
Q psy14815 112 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR---DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH 188 (479)
Q Consensus 112 g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~ 188 (479)
..|.++|..... ...+..+...+.+..|+|||+.|+..+. +..|.+||+.++.. ..+..+...+...+|+
T Consensus 182 ~~l~~~d~dg~~---~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~----~~l~~~~g~~~~~~~S 254 (435)
T PRK05137 182 KRLAIMDQDGAN---VRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQR----ELVGNFPGMTFAPRFS 254 (435)
T ss_pred eEEEEECCCCCC---cEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcE----EEeecCCCcccCcEEC
Confidence 378899986654 3445567788999999999998888764 46799999987632 2334455667789999
Q ss_pred cCCCEEE-EEEcCCc--EEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeC-CC--eEEEEeccCCCCCCC
Q psy14815 189 PFDNILA-SASYDDT--VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD-DA--TVKIWKEYKPGNSAG 262 (479)
Q Consensus 189 ~~~~~l~-~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~ 262 (479)
|+|+.|+ +.+.++. |.+||+.++. ...+..+........|+|||+.|+..+. +| .|++||+....
T Consensus 255 PDG~~la~~~~~~g~~~Iy~~d~~~~~-----~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~---- 325 (435)
T PRK05137 255 PDGRKVVMSLSQGGNTDIYTMDLRSGT-----TTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSN---- 325 (435)
T ss_pred CCCCEEEEEEecCCCceEEEEECCCCc-----eEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCC----
Confidence 9998775 4555555 7777887654 2345555566678899999999887663 33 57777753221
Q ss_pred CCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC---CeEEEcccCCCCCCCCceeeEEEecccccccccee
Q psy14815 263 IPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD---DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVN 339 (479)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d---g~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 339 (479)
...+... ...+....|+|+|++|+..+.+ ..|.+|++..+. ...+..+ ..+.
T Consensus 326 ------------~~~lt~~-~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~----------~~~lt~~--~~~~ 380 (435)
T PRK05137 326 ------------PRRISFG-GGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG----------ERILTSG--FLVE 380 (435)
T ss_pred ------------eEEeecC-CCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCc----------eEeccCC--CCCC
Confidence 1222222 3345678899999999877653 357888876554 2222112 2467
Q ss_pred EEEecCCCCCCCccc
Q psy14815 340 CVAWNPVVPEPQKTN 354 (479)
Q Consensus 340 ~~~~sp~~~~l~~~~ 354 (479)
...|+|||+.|+...
T Consensus 381 ~p~~spDG~~i~~~~ 395 (435)
T PRK05137 381 GPTWAPNGRVIMFFR 395 (435)
T ss_pred CCeECCCCCEEEEEE
Confidence 789999999886543
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.3e-14 Score=129.65 Aligned_cols=218 Identities=16% Similarity=0.218 Sum_probs=171.8
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCcee
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 170 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 170 (479)
-....+.++.+|+.++.|+..|.+..+|..+++.. ..+. -...|.++.|..+.++++++ ....+.|||-... .+.
T Consensus 130 FGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~--~Ei~-v~Etv~Dv~~LHneq~~AVA-QK~y~yvYD~~Gt-ElH 204 (545)
T KOG1272|consen 130 FGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLH--FEIN-VMETVRDVTFLHNEQFFAVA-QKKYVYVYDNNGT-ELH 204 (545)
T ss_pred cCCeeeeecCCccEEEecCCccceeeeecccceee--eeee-hhhhhhhhhhhcchHHHHhh-hhceEEEecCCCc-EEe
Confidence 45567899999999999999999999999999744 3333 23578899999888877777 6688999996653 233
Q ss_pred eeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEE
Q psy14815 171 CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 250 (479)
Q Consensus 171 ~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 250 (479)
|+ ..| ..|..+.|-|.--+|++++..|.++.-|+..++. +..+....+.+..+.-+|-+..+-+|...|+|.
T Consensus 205 Cl---k~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~Gkl----Va~~~t~~G~~~vm~qNP~NaVih~GhsnGtVS 276 (545)
T KOG1272|consen 205 CL---KRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKL----VASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVS 276 (545)
T ss_pred eh---hhc-CchhhhcccchhheeeecccCCceEEEeechhhh----hHHHHccCCccchhhcCCccceEEEcCCCceEE
Confidence 33 333 4588999999888999999999999999998875 677777788899999999999999999999999
Q ss_pred EEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEecc
Q psy14815 251 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTE 330 (479)
Q Consensus 251 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~ 330 (479)
+|..... .++..+-.| .++|.++++.++|.|++|++.|..++|||++... .+.+.
T Consensus 277 lWSP~sk---------------ePLvKiLcH-~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~---------ql~t~ 331 (545)
T KOG1272|consen 277 LWSPNSK---------------EPLVKILCH-RGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFY---------QLHTY 331 (545)
T ss_pred ecCCCCc---------------chHHHHHhc-CCCcceEEECCCCcEEeecccccceeEeeecccc---------cccee
Confidence 9986433 334555555 8899999999999999999999999999998865 12222
Q ss_pred ccccccceeEEEecCCCC
Q psy14815 331 HRAHNQDVNCVAWNPVVP 348 (479)
Q Consensus 331 ~~~h~~~v~~~~~sp~~~ 348 (479)
.. .-+...+++|..|-
T Consensus 332 ~t--p~~a~~ls~Sqkgl 347 (545)
T KOG1272|consen 332 RT--PHPASNLSLSQKGL 347 (545)
T ss_pred ec--CCCccccccccccc
Confidence 22 23456667776553
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.4e-11 Score=119.62 Aligned_cols=218 Identities=17% Similarity=0.139 Sum_probs=138.0
Q ss_pred ccCCcEEEEEECCCCCEEEEEECC---CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEE-EeCCC--cEEEE
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFD---ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT-CSRDK--SVWVW 161 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~-~~~dg--~i~vw 161 (479)
.+...+...+|+|||+.|+..+.+ ..|.+||+.+++...+.. ..+.+....|+|||+.|+. .+.+| .|.+|
T Consensus 196 ~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~---~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~ 272 (430)
T PRK00178 196 QSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITN---FEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVM 272 (430)
T ss_pred cCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccC---CCCCcCCeEECCCCCEEEEEEccCCCceEEEE
Confidence 456788999999999999887654 369999999886443332 3344557899999998774 44555 57888
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc-CC--cEEEEecCCcccceEeeeeecCCCccEEEEEEccCCC
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DD--TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS 238 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 238 (479)
|+.++.. ..+..+........|+|+|+.|+..+. +| .|.++|+.+++. ..+ ... ........|+|+|+
T Consensus 273 d~~~~~~----~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~--~~l-t~~--~~~~~~~~~Spdg~ 343 (430)
T PRK00178 273 DLASRQL----SRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRA--ERV-TFV--GNYNARPRLSADGK 343 (430)
T ss_pred ECCCCCe----EEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCE--EEe-ecC--CCCccceEECCCCC
Confidence 9887632 223444455667889999988776654 33 477777766543 112 111 22334578999999
Q ss_pred EEEEeeCC-C--eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC---CeEEEccc
Q psy14815 239 RLATCSDD-A--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD---DAIRIFKE 312 (479)
Q Consensus 239 ~l~s~~~d-g--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d---g~i~vw~~ 312 (479)
.++..+.+ + .|.+||+..... ..+.. ........|+|+|+.++..+.+ ..+.++++
T Consensus 344 ~i~~~~~~~~~~~l~~~dl~tg~~----------------~~lt~--~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~ 405 (430)
T PRK00178 344 TLVMVHRQDGNFHVAAQDLQRGSV----------------RILTD--TSLDESPSVAPNGTMLIYATRQQGRGVLMLVSI 405 (430)
T ss_pred EEEEEEccCCceEEEEEECCCCCE----------------EEccC--CCCCCCceECCCCCEEEEEEecCCceEEEEEEC
Confidence 99876643 3 477788744321 11111 1112245899999988777654 34666676
Q ss_pred CCCCCCCCceeeEEEeccccccccceeEEEecCC
Q psy14815 313 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV 346 (479)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 346 (479)
.... ...+ ..+.+.+...+|||-
T Consensus 406 ~g~~----------~~~l-~~~~g~~~~p~ws~~ 428 (430)
T PRK00178 406 NGRV----------RLPL-PTAQGEVREPSWSPY 428 (430)
T ss_pred CCCc----------eEEC-cCCCCCcCCCccCCC
Confidence 5443 2222 234556777788874
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.9e-12 Score=128.90 Aligned_cols=215 Identities=17% Similarity=0.187 Sum_probs=153.6
Q ss_pred eccccCCcEEEEEECCC-CCEEEEEECCCeEEEEECCC-----CeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcE
Q psy14815 85 LSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRS-----GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 158 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i 158 (479)
....|...+..++.++. +.++++|+.||+|++||.+. +......++..-...+.++...+.++.+|+++.||.|
T Consensus 1043 hL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v 1122 (1431)
T KOG1240|consen 1043 HLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSV 1122 (1431)
T ss_pred hhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeE
Confidence 35678888889988875 49999999999999999863 2333445555556789999999999999999999999
Q ss_pred EEEEeCCCC--cee--eeeeeeccc--cceeEEEEec-CC-CEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEE
Q psy14815 159 WVWEVGEED--EYE--CAAVINAHI--QDVKKVRFHP-FD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWS 230 (479)
Q Consensus 159 ~vwd~~~~~--~~~--~~~~~~~~~--~~v~~l~~~~-~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~ 230 (479)
++.++...+ ... .......+. .-+..-+|.. .+ ..++.+...+.|..||.+....-|.. +.....+.|++
T Consensus 1123 ~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~l--k~~~~hG~vTS 1200 (1431)
T KOG1240|consen 1123 RVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRL--KNQLRHGLVTS 1200 (1431)
T ss_pred EEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhh--hcCccccceeE
Confidence 999997621 111 111112221 2233334433 23 37888889999999999976653322 23334578999
Q ss_pred EEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCC---CeEEEEe--CCC
Q psy14815 231 LAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT---DLIATAC--GDD 305 (479)
Q Consensus 231 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~---~~l~~~~--~dg 305 (479)
++.+|.+++++.|+..|.+.+||++-.. ++......+..+|..+..+|.. ...++++ ..+
T Consensus 1201 i~idp~~~WlviGts~G~l~lWDLRF~~---------------~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~n 1265 (1431)
T KOG1240|consen 1201 IVIDPWCNWLVIGTSRGQLVLWDLRFRV---------------PILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNN 1265 (1431)
T ss_pred EEecCCceEEEEecCCceEEEEEeecCc---------------eeecccCcccCCcceEEeeccCCCCceEEEecccCCC
Confidence 9999999999999999999999996543 3444444445678888777643 3454444 468
Q ss_pred eEEEcccCCCC
Q psy14815 306 AIRIFKENPEA 316 (479)
Q Consensus 306 ~i~vw~~~~~~ 316 (479)
.|.+|++.++.
T Consensus 1266 evs~wn~~~g~ 1276 (1431)
T KOG1240|consen 1266 EVSTWNMETGL 1276 (1431)
T ss_pred ceeeeecccCc
Confidence 89999999885
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.4e-12 Score=120.74 Aligned_cols=212 Identities=15% Similarity=0.198 Sum_probs=161.2
Q ss_pred CCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEE-
Q psy14815 20 NPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW- 98 (479)
Q Consensus 20 s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~- 98 (479)
.|...++|....||.+||||+.+++....+.. .+..+..++-..|.+.-. .......++.+
T Consensus 2 ~~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p------~~~~s~t~~~~~w~L~~~------------~s~~k~~~~~~~ 63 (541)
T KOG4547|consen 2 PPALDYFALSTGDGRLRIWDTAKNQLQQEFAP------IASLSGTCTYTKWGLSAD------------YSPMKWLSLEKA 63 (541)
T ss_pred CchhheEeecCCCCeEEEEEccCceeeeeecc------chhccCcceeEEEEEEec------------cchHHHHhHHHH
Confidence 34567999999999999999998887766642 222334444445543311 11111122222
Q ss_pred ---CCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeee
Q psy14815 99 ---SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVI 175 (479)
Q Consensus 99 ---~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 175 (479)
+.+...++-|...|.|.+|++..++......-..|.+.|.++.++.+-..|.+++.|+.+..|+.... ..+...
T Consensus 64 ~~~s~~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~---~~~~~~ 140 (541)
T KOG4547|consen 64 KKASLDTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEK---VIIRIW 140 (541)
T ss_pred hhccCCceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccc---eeeeee
Confidence 23556788899999999999999986655555689999999999999999999999999999999887 666777
Q ss_pred eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC-----CCEEEEe-eCCCeE
Q psy14815 176 NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-----GSRLATC-SDDATV 249 (479)
Q Consensus 176 ~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~s~-~~dg~i 249 (479)
.+....+.+++++||+..+++++ +.|++||+.+.+. +..+.+|.++|.++.|..+ |.+++++ ..+..+
T Consensus 141 ~~~~~~~~sl~is~D~~~l~~as--~~ik~~~~~~kev----v~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i 214 (541)
T KOG4547|consen 141 KEQKPLVSSLCISPDGKILLTAS--RQIKVLDIETKEV----VITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGI 214 (541)
T ss_pred ccCCCccceEEEcCCCCEEEecc--ceEEEEEccCceE----EEEecCCCcceEEEEEEEeccccccceeeeccccccce
Confidence 77788899999999999999887 5799999997664 8899999999999999876 6676654 455668
Q ss_pred EEEeccCCC
Q psy14815 250 KIWKEYKPG 258 (479)
Q Consensus 250 ~iwd~~~~~ 258 (479)
.+|-.....
T Consensus 215 ~~w~v~~~~ 223 (541)
T KOG4547|consen 215 TVWVVEKED 223 (541)
T ss_pred eEEEEEccc
Confidence 888776543
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.52 E-value=4.3e-10 Score=98.71 Aligned_cols=263 Identities=13% Similarity=0.210 Sum_probs=175.8
Q ss_pred ccccceEEEEECCCCCeEEEeeC---CCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGE---DKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
.+.+.++-|+|+|++++|.++-. +|.|.-|.++.. +|.+.+.+..
T Consensus 37 ~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~--------------------~G~Lt~ln~~------------ 84 (346)
T COG2706 37 AELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPD--------------------DGRLTFLNRQ------------ 84 (346)
T ss_pred cccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCC--------------------CCeEEEeecc------------
Confidence 45677888999999998888754 466666655421 1222222211
Q ss_pred ccccCCcEEEEEECCCCCEEEEEEC-CCeEEEEECCC-CeEEEeEEEeCCCCc----------EEEEEEcCCCCEEEEEe
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASF-DATTAVWDKRS-GQFECNATLEGHENE----------VKSVTWSKNGQFLATCS 153 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~-dg~i~iwd~~~-~~~~~~~~~~~~~~~----------v~~l~~~~~~~~l~~~~ 153 (479)
.....+-+.+++++++++++++.. .|.|.++-++. |..........|.+. +.+..+.|+++++++.+
T Consensus 85 -~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~D 163 (346)
T COG2706 85 -TLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPD 163 (346)
T ss_pred -ccCCCCCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEee
Confidence 112233488999999999999977 47999998865 543333333445555 88999999999999886
Q ss_pred C-CCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeeeecC------CC
Q psy14815 154 R-DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFATLKS------HT 225 (479)
Q Consensus 154 ~-dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~------~~ 225 (479)
. --.|.+|++..+...............-+.|.|+|++++....+ -+++|.+|...........+..+.. ..
T Consensus 164 LG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~ 243 (346)
T COG2706 164 LGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGT 243 (346)
T ss_pred cCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCC
Confidence 5 34699999986542221111223445678999999999877766 4889999999875433333333321 23
Q ss_pred ccEEEEEEccCCCEEEEeeC-CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC
Q psy14815 226 STVWSLAFDRIGSRLATCSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 304 (479)
Q Consensus 226 ~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d 304 (479)
.....+..+++|++|+++.. ...|-+|.+..... ....+.....+ +...+.+.|++++++|++++.+
T Consensus 244 ~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g-----------~L~~~~~~~te-g~~PR~F~i~~~g~~Liaa~q~ 311 (346)
T COG2706 244 NWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGG-----------KLELVGITPTE-GQFPRDFNINPSGRFLIAANQK 311 (346)
T ss_pred CceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCC-----------EEEEEEEeccC-CcCCccceeCCCCCEEEEEccC
Confidence 46678899999999987753 34788887754422 12233333332 5567899999999999888775
Q ss_pred -CeEEEcccCCCC
Q psy14815 305 -DAIRIFKENPEA 316 (479)
Q Consensus 305 -g~i~vw~~~~~~ 316 (479)
..|.+|..+...
T Consensus 312 sd~i~vf~~d~~T 324 (346)
T COG2706 312 SDNITVFERDKET 324 (346)
T ss_pred CCcEEEEEEcCCC
Confidence 568999887654
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.2e-13 Score=122.59 Aligned_cols=231 Identities=17% Similarity=0.229 Sum_probs=164.9
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC--CCCEEEEEeCCCcEEEEEe
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK--NGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~~~~~dg~i~vwd~ 163 (479)
+.+|.+.|.|+.|+.+|.+|++|+.|-.+.|||.-..+.. ...-.+|...|.++.|-| +.+.+++|..|..|++||+
T Consensus 46 L~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~Kll-hsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl 124 (758)
T KOG1310|consen 46 LTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLL-HSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDL 124 (758)
T ss_pred hccccceecceeecCCCCEEeecCCcceEEeecchhccee-eeeecccccceeEEeeeccCCCeEEEeccCcceEEEEec
Confidence 4799999999999999999999999999999999866522 223357999999999999 5678999999999999999
Q ss_pred CCCC-------ceeeeeeeeccccceeEEEEecCC-CEEEEEEcCCcEEEEecCCcccce------EeeeeecCCCccEE
Q psy14815 164 GEED-------EYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADW------INFATLKSHTSTVW 229 (479)
Q Consensus 164 ~~~~-------~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~------~~~~~~~~~~~~v~ 229 (479)
...+ .......+.+|...|..++-.|++ +.+.++++||+|+-||++.+..-. ..+..+...--...
T Consensus 125 ~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~lielk 204 (758)
T KOG1310|consen 125 DSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLIELK 204 (758)
T ss_pred ccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhheee
Confidence 8521 123445567888999999999988 889999999999999999643200 00111111223567
Q ss_pred EEEEccCC-CEEEEeeCCCeEEEEeccCCCCCCC---CCCCCCCCceEEEEEEeccc-----------cccEEEEEecCC
Q psy14815 230 SLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAG---IPTPDNDSVWKCVCTLSGHH-----------GRTIYDISWCHL 294 (479)
Q Consensus 230 ~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-----------~~~i~~l~~~~~ 294 (479)
++..+|.. .+|+.|+.|-..++||.+....... .....+.....|++.+...| -..++-++|+|+
T Consensus 205 ~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vtfnpN 284 (758)
T KOG1310|consen 205 CLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVTFNPN 284 (758)
T ss_pred eeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEEEEECCC
Confidence 88999865 5788999999999999654332211 10111112222333332111 113567899999
Q ss_pred CCeEEEEeCCCeEEEcccCCCCC
Q psy14815 295 TDLIATACGDDAIRIFKENPEAG 317 (479)
Q Consensus 295 ~~~l~~~~~dg~i~vw~~~~~~~ 317 (479)
|.-|++.-....|+++|+..++.
T Consensus 285 GtElLvs~~gEhVYlfdvn~~~~ 307 (758)
T KOG1310|consen 285 GTELLVSWGGEHVYLFDVNEDKS 307 (758)
T ss_pred CcEEEEeeCCeEEEEEeecCCCC
Confidence 98666665566899999988763
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.7e-12 Score=122.33 Aligned_cols=287 Identities=13% Similarity=0.212 Sum_probs=196.7
Q ss_pred cccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
......|++|+....++|+|+.||.+++-.+.+...-....+... ...........+|
T Consensus 13 nnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa----------------------~snLsmNQtLeGH 70 (1189)
T KOG2041|consen 13 NNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAA----------------------ASNLSMNQTLEGH 70 (1189)
T ss_pred CCceEEEEEEcccCCeEEeccccceeEEEEccccCCccccccccc----------------------ccccchhhhhccC
Confidence 456789999999999999999999999998876544322211100 0001112234799
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCce
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 169 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 169 (479)
...|.-+.|+.+.+.|-|...+|.|.+|-+-.+.+-....-....+-|.+++|+.||..++....||.|.+=.++....+
T Consensus 71 ~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIw 150 (1189)
T KOG2041|consen 71 NASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIW 150 (1189)
T ss_pred cceEEEEEeccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceec
Confidence 99999999999999999999999999999988875444444456678999999999999999999999998888776322
Q ss_pred eeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCccc---ceEe----eeeecCCCccEEEEEEc--------
Q psy14815 170 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA---DWIN----FATLKSHTSTVWSLAFD-------- 234 (479)
Q Consensus 170 ~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~----~~~~~~~~~~v~~~~~~-------- 234 (479)
. ..+++ .....+.|++|.+.++.+-.+|.+.+||.+..-. ...+ ...+......+..+.|.
T Consensus 151 g--KeLkg--~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~ 226 (1189)
T KOG2041|consen 151 G--KELKG--QLLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVP 226 (1189)
T ss_pred c--hhcch--heccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCC
Confidence 1 11221 2244688999999999999999999999764221 0001 01112222335566663
Q ss_pred cCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCC---------
Q psy14815 235 RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD--------- 305 (479)
Q Consensus 235 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg--------- 305 (479)
|+...|+.+-.+|.+.|..-.....+. .+. .+-.+....|+++|..|++++.|.
T Consensus 227 pdrP~lavcy~nGr~QiMR~eND~~Pv---------------v~d--tgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n 289 (1189)
T KOG2041|consen 227 PDRPRLAVCYANGRMQIMRSENDPEPV---------------VVD--TGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSN 289 (1189)
T ss_pred CCCCEEEEEEcCceehhhhhcCCCCCe---------------EEe--cccEeecceecCCCcEEEEccCcccccCccccc
Confidence 477889999999999887654333321 111 134688899999999999998752
Q ss_pred eEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 306 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 306 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
.|.+|..-.. ....++.....|++++|-..|-.+
T Consensus 290 ~v~Fysp~G~-----------i~gtlkvpg~~It~lsWEg~gLri 323 (1189)
T KOG2041|consen 290 KVHFYSPYGH-----------IVGTLKVPGSCITGLSWEGTGLRI 323 (1189)
T ss_pred eEEEeccchh-----------heEEEecCCceeeeeEEcCCceEE
Confidence 3444433221 222234456778889988766544
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.2e-11 Score=104.82 Aligned_cols=243 Identities=16% Similarity=0.134 Sum_probs=159.9
Q ss_pred eEEEeecCCcEEEecCCCCCCceeeeEEeccccC-CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCC
Q psy14815 57 SLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ-RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHEN 135 (479)
Q Consensus 57 ~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~-~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 135 (479)
.++.+...|.+.++..................-. ....++.|++.+..++++-.+|.+.+-+......+..+..+.|+.
T Consensus 87 ~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~ 166 (339)
T KOG0280|consen 87 NLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEF 166 (339)
T ss_pred eeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccce
Confidence 4455556677777765532221111111100111 135678899999999999999999977776666666678899999
Q ss_pred cEEEEEEcC-CCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCccc
Q psy14815 136 EVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEA 213 (479)
Q Consensus 136 ~v~~l~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~ 213 (479)
++....|+. +.+.+++|+.|+.+..||+|..+. ......+.|...|.++.-+| .+.++++|+.|-.|++||.|+...
T Consensus 167 E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~-~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~k 245 (339)
T KOG0280|consen 167 EAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKT-FIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGK 245 (339)
T ss_pred eeeeeecccCCCceEEecCCCceEEEEEecCCcc-eeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccC
Confidence 999999987 667999999999999999995542 23333567888999998887 678999999999999999996543
Q ss_pred ceEeeeeecCCCccEEEEEEccCCC-EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec
Q psy14815 214 DWINFATLKSHTSTVWSLAFDRIGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 292 (479)
Q Consensus 214 ~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 292 (479)
++..- .-.+.|+.+.++|.-. .++.+..-+-.+|-+........ .......+.| .+-.+.-.|.
T Consensus 246 ---Pl~~~-~v~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~~~~~~e~----------~~~~~s~~~h-dSl~YG~DWd 310 (339)
T KOG0280|consen 246 ---PLFKA-KVGGGVWRIKHHPEIFHRLLAACMHNGAKILDSSDKVLEF----------QIVLPSDKIH-DSLCYGGDWD 310 (339)
T ss_pred ---ccccC-ccccceEEEEecchhhhHHHHHHHhcCceEEEecccccch----------heeeeccccc-cceeeccccc
Confidence 23222 2448899999998543 23334444447777765443220 0123333444 5555555665
Q ss_pred CCCCeEEEEeC-CCeEE-EcccCCC
Q psy14815 293 HLTDLIATACG-DDAIR-IFKENPE 315 (479)
Q Consensus 293 ~~~~~l~~~~~-dg~i~-vw~~~~~ 315 (479)
....+|++++. |..++ +|-.-++
T Consensus 311 ~~~~~lATCsFYDk~~~~~Wl~~t~ 335 (339)
T KOG0280|consen 311 SKDSFLATCSFYDKKIRQLWLHITG 335 (339)
T ss_pred cccceeeeeeccccceeeeeeeccC
Confidence 55567888653 55544 6644443
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.5e-10 Score=100.20 Aligned_cols=250 Identities=14% Similarity=0.122 Sum_probs=170.8
Q ss_pred cccCCcEEEEEECCCCCEEEEEECC---CeEEEEECCC--CeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-CCcEEE
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFD---ATTAVWDKRS--GQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DKSVWV 160 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~d---g~i~iwd~~~--~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~i~v 160 (479)
..+...++-++|+|+++.|.++-.+ |.|.-|.+.. |+...+-.......+...+++++++++++++.. .|.|.+
T Consensus 36 v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v 115 (346)
T COG2706 36 VAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSV 115 (346)
T ss_pred ccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEE
Confidence 3567788999999999999988664 6777776654 665444443333445588999999999998875 578999
Q ss_pred EEeCCCCceeeeeeeeccccc----------eeEEEEecCCCEEEEEEc-CCcEEEEecCCcccceEeeeeecCCCccEE
Q psy14815 161 WEVGEEDEYECAAVINAHIQD----------VKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWINFATLKSHTSTVW 229 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~----------v~~l~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~ 229 (479)
+-++....+........|..+ +.+..+.|++++|++.+- --.|.+|++..+.........+ .....-.
T Consensus 116 ~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v-~~G~GPR 194 (346)
T COG2706 116 YPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEV-KPGAGPR 194 (346)
T ss_pred EEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCcccccccccc-CCCCCcc
Confidence 999775444444344445554 788999999999988763 2369999999666533333333 3345568
Q ss_pred EEEEccCCCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEec-----cccccEEEEEecCCCCeEEEEeC
Q psy14815 230 SLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-----HHGRTIYDISWCHLTDLIATACG 303 (479)
Q Consensus 230 ~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~l~~~~~~~~l~~~~~ 303 (479)
.|.|+|++++.+..+ -+++|.+|....... ..+.++++.. .......+|..+++|++|.++..
T Consensus 195 Hi~FHpn~k~aY~v~EL~stV~v~~y~~~~g-----------~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNR 263 (346)
T COG2706 195 HIVFHPNGKYAYLVNELNSTVDVLEYNPAVG-----------KFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNR 263 (346)
T ss_pred eEEEcCCCcEEEEEeccCCEEEEEEEcCCCc-----------eEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecC
Confidence 899999999987665 588999999866411 1122222211 12456788999999999988754
Q ss_pred -CCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 304 -DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 304 -dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
...|-+|.+....+. ...+.. ...+....+.+.|+|++++|....
T Consensus 264 g~dsI~~f~V~~~~g~-----L~~~~~-~~teg~~PR~F~i~~~g~~Liaa~ 309 (346)
T COG2706 264 GHDSIAVFSVDPDGGK-----LELVGI-TPTEGQFPRDFNINPSGRFLIAAN 309 (346)
T ss_pred CCCeEEEEEEcCCCCE-----EEEEEE-eccCCcCCccceeCCCCCEEEEEc
Confidence 347888888765411 112222 223445578999999999985554
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.9e-09 Score=101.06 Aligned_cols=249 Identities=15% Similarity=0.145 Sum_probs=161.6
Q ss_pred cCCcEEEEEECCCCCEEEEEEC----CCeEEEEECCC--CeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-CCcEEEE
Q psy14815 89 HQRTIRETAWSPCGNFIASASF----DATTAVWDKRS--GQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DKSVWVW 161 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~----dg~i~iwd~~~--~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~i~vw 161 (479)
.......++++|++++|.++.. ++.|..|++.. ++...+............++++|++++|+++.. +|.|.++
T Consensus 35 ~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~ 114 (345)
T PF10282_consen 35 EGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVF 114 (345)
T ss_dssp ESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEE
Confidence 3456677889999999999877 46899998765 566566665544556678999999999998875 8999999
Q ss_pred EeCCCCceeeeeeeec-----------cccceeEEEEecCCCEEEEEEc-CCcEEEEecCCcccceEeeeee-cCCCccE
Q psy14815 162 EVGEEDEYECAAVINA-----------HIQDVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWINFATL-KSHTSTV 228 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~-----------~~~~v~~l~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~-~~~~~~v 228 (479)
++.............. ......++.|+|+++++++... ...|.+|++............+ .......
T Consensus 115 ~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GP 194 (345)
T PF10282_consen 115 PLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGP 194 (345)
T ss_dssp EECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSE
T ss_pred EccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCC
Confidence 9987543332211111 1233678999999998887653 3479999998665322222222 2345567
Q ss_pred EEEEEccCCCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc-----ccccEEEEEecCCCCeEEEEe
Q psy14815 229 WSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-----HGRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~l~~~~~~~~l~~~~ 302 (479)
..++|+|++++++... .++.|.++++.... ...+.+..+... .......++++|||++|.++.
T Consensus 195 Rh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~-----------g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsn 263 (345)
T PF10282_consen 195 RHLAFSPDGKYAYVVNELSNTVSVFDYDPSD-----------GSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSN 263 (345)
T ss_dssp EEEEE-TTSSEEEEEETTTTEEEEEEEETTT-----------TEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEE
T ss_pred cEEEEcCCcCEEEEecCCCCcEEEEeecccC-----------CceeEEEEeeeccccccccCCceeEEEecCCCEEEEEe
Confidence 8999999999886655 57789999986221 122333333221 122678899999999887765
Q ss_pred -CCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 303 -GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 303 -~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
..++|.+|+++...+. +..+.... ......+.++++|+|++|..+.
T Consensus 264 r~~~sI~vf~~d~~~g~-----l~~~~~~~-~~G~~Pr~~~~s~~g~~l~Va~ 310 (345)
T PF10282_consen 264 RGSNSISVFDLDPATGT-----LTLVQTVP-TGGKFPRHFAFSPDGRYLYVAN 310 (345)
T ss_dssp CTTTEEEEEEECTTTTT-----EEEEEEEE-ESSSSEEEEEE-TTSSEEEEEE
T ss_pred ccCCEEEEEEEecCCCc-----eEEEEEEe-CCCCCccEEEEeCCCCEEEEEe
Confidence 4678999999543211 11222221 2233478999999999996654
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.1e-13 Score=137.30 Aligned_cols=202 Identities=16% Similarity=0.265 Sum_probs=155.9
Q ss_pred ccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 7 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
++.|-..|.++.=+|...+.+||+.||.|++|....++.+..+ +.
T Consensus 2204 ~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~---------------------rt-------------- 2248 (2439)
T KOG1064|consen 2204 IKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCF---------------------RT-------------- 2248 (2439)
T ss_pred eecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEe---------------------ec--------------
Confidence 3445567777777888888888888888888887665554332 11
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe---CCCcEEEEEe
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS---RDKSVWVWEV 163 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~---~dg~i~vwd~ 163 (479)
.+. ..|+.+.|+.+|+.+..+..||.+.+|..... .....+.|........|-. ..+++++ .++.+.+||.
T Consensus 2249 ~g~-s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~pk---~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDt 2322 (2439)
T KOG1064|consen 2249 AGN-SRVTRSRFNHQGNKFGIVDGDGDLSLWQASPK---PYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDT 2322 (2439)
T ss_pred cCc-chhhhhhhcccCCceeeeccCCceeecccCCc---ceeccccCCccccceeeee--hhhhccccCCCCCcccchhc
Confidence 233 88999999999999999999999999998733 6677788998888888875 5667664 4788999998
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
.-......+. .+|.+.++++++.|..++|++|+.+|.|++||++..+. +..++. +. ...++++|
T Consensus 2323 l~~~~~s~v~--~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql----~h~~~~---------~~-~~~~f~~~ 2386 (2439)
T KOG1064|consen 2323 LLPPMNSLVH--TCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQL----RHTFQA---------LD-TREYFVTG 2386 (2439)
T ss_pred ccCcccceee--eecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHH----HHHhhh---------hh-hhheeecc
Confidence 7654434444 89999999999999999999999999999999996543 222222 44 46789999
Q ss_pred eCCCeEEEEeccCCCCCCCCCC
Q psy14815 244 SDDATVKIWKEYKPGNSAGIPT 265 (479)
Q Consensus 244 ~~dg~i~iwd~~~~~~~~~~~~ 265 (479)
+..|.++||++........++.
T Consensus 2387 ss~g~ikIw~~s~~~ll~~~p~ 2408 (2439)
T KOG1064|consen 2387 SSEGNIKIWRLSEFGLLHTFPS 2408 (2439)
T ss_pred CcccceEEEEccccchhhcCch
Confidence 9999999999987765555444
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.8e-11 Score=117.15 Aligned_cols=218 Identities=17% Similarity=0.153 Sum_probs=134.0
Q ss_pred ccCCcEEEEEECCCCCEEEEEECC---CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEE-EeCCCc--EEEE
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFD---ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT-CSRDKS--VWVW 161 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~-~~~dg~--i~vw 161 (479)
.....+.+..|+|||+.|+..+.+ ..|.+||+.+++...+..+. +......|+|||+.|+. .+.+|. |.++
T Consensus 215 ~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~---g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~ 291 (448)
T PRK04792 215 RSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFP---GINGAPRFSPDGKKLALVLSKDGQPEIYVV 291 (448)
T ss_pred cCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCC---CCcCCeeECCCCCEEEEEEeCCCCeEEEEE
Confidence 346688899999999999877543 26889999888644333333 33457899999997765 556665 7777
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc-CC--cEEEEecCCcccceEeeeeecCCCccEEEEEEccCCC
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DD--TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS 238 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 238 (479)
|+.+++ ...+..+.......+|+|+++.|+..+. ++ .|.++|+.+++. ..+ +.. .......+|+|+|+
T Consensus 292 dl~tg~----~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~--~~L-t~~--g~~~~~~~~SpDG~ 362 (448)
T PRK04792 292 DIATKA----LTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKV--SRL-TFE--GEQNLGGSITPDGR 362 (448)
T ss_pred ECCCCC----eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCE--EEE-ecC--CCCCcCeeECCCCC
Confidence 877653 2233344445677899999998876654 34 466667765542 112 122 22234578999999
Q ss_pred EEEEeeC-CCeEEE--EeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC-C--eEEEccc
Q psy14815 239 RLATCSD-DATVKI--WKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD-D--AIRIFKE 312 (479)
Q Consensus 239 ~l~s~~~-dg~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d-g--~i~vw~~ 312 (479)
+|+..+. ++...| +|+..+.. ..+... .......|+|+|+.|+..+.+ + .+++++.
T Consensus 363 ~l~~~~~~~g~~~I~~~dl~~g~~----------------~~lt~~--~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~ 424 (448)
T PRK04792 363 SMIMVNRTNGKFNIARQDLETGAM----------------QVLTST--RLDESPSVAPNGTMVIYSTTYQGKQVLAAVSI 424 (448)
T ss_pred EEEEEEecCCceEEEEEECCCCCe----------------EEccCC--CCCCCceECCCCCEEEEEEecCCceEEEEEEC
Confidence 9877654 444444 55433211 111111 111234799999987776543 3 3667776
Q ss_pred CCCCCCCCceeeEEEeccccccccceeEEEecCC
Q psy14815 313 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV 346 (479)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 346 (479)
+... ...+ ..+.+.+...+|||-
T Consensus 425 ~G~~----------~~~l-~~~~g~~~~p~Wsp~ 447 (448)
T PRK04792 425 DGRF----------KARL-PAGQGEVKSPAWSPF 447 (448)
T ss_pred CCCc----------eEEC-cCCCCCcCCCccCCC
Confidence 5432 2222 344556778889874
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=9.1e-11 Score=112.66 Aligned_cols=225 Identities=12% Similarity=0.070 Sum_probs=136.4
Q ss_pred cCCcEEEEEECCCCCE--EE-EEECC--CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-CC----cE
Q psy14815 89 HQRTIRETAWSPCGNF--IA-SASFD--ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DK----SV 158 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~--l~-t~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg----~i 158 (479)
.......-+|+|||+. ++ +...+ ..|.+.++.+++...+..+. +......|+|||+.|+..+. +| .+
T Consensus 183 ~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~---g~~~~p~wSPDG~~Laf~s~~~g~~di~~ 259 (428)
T PRK01029 183 EHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQ---GNQLMPTFSPRKKLLAFISDRYGNPDLFI 259 (428)
T ss_pred CCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCC---CCccceEECCCCCEEEEEECCCCCcceeE
Confidence 3455677899999975 32 33333 36888899888655444444 34457899999998886653 23 34
Q ss_pred EEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEe--cCCcccceEeeeeecCCCccEEEEEEcc
Q psy14815 159 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFK--EDKAEADWINFATLKSHTSTVWSLAFDR 235 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d--~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 235 (479)
..|++..+...................+|+|||+.|+..+ .+|...+|. +..... ....+..+...+....|+|
T Consensus 260 ~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~---~~~~lt~~~~~~~~p~wSP 336 (428)
T PRK01029 260 QSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQ---SPRLLTKKYRNSSCPAWSP 336 (428)
T ss_pred EEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECccccc---ceEEeccCCCCccceeECC
Confidence 4467654211111122222223346789999999887765 466555554 432111 1223334445667889999
Q ss_pred CCCEEEEeeCC---CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeC---CCeEEE
Q psy14815 236 IGSRLATCSDD---ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG---DDAIRI 309 (479)
Q Consensus 236 ~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~---dg~i~v 309 (479)
||+.|+..+.+ ..|.+||+..+.. ..+... ...+....|+|||+.|+..+. ...|++
T Consensus 337 DG~~Laf~~~~~g~~~I~v~dl~~g~~----------------~~Lt~~-~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~ 399 (428)
T PRK01029 337 DGKKIAFCSVIKGVRQICVYDLATGRD----------------YQLTTS-PENKESPSWAIDSLHLVYSAGNSNESELYL 399 (428)
T ss_pred CCCEEEEEEcCCCCcEEEEEECCCCCe----------------EEccCC-CCCccceEECCCCCEEEEEECCCCCceEEE
Confidence 99998876543 3688998754321 122221 234667899999998775433 356888
Q ss_pred cccCCCCCCCCceeeEEEeccccccccceeEEEecCCC
Q psy14815 310 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347 (479)
Q Consensus 310 w~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~ 347 (479)
+++..++ ...+. ...+.+...+|+|-.
T Consensus 400 vdl~~g~----------~~~Lt-~~~g~~~~p~Ws~~~ 426 (428)
T PRK01029 400 ISLITKK----------TRKIV-IGSGEKRFPSWGAFP 426 (428)
T ss_pred EECCCCC----------EEEee-cCCCcccCceecCCC
Confidence 8888776 22332 234456778898864
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.5e-11 Score=113.24 Aligned_cols=285 Identities=8% Similarity=0.117 Sum_probs=184.3
Q ss_pred cccCCcEEEEEECCCCCEE-EEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCC
Q psy14815 87 DGHQRTIRETAWSPCGNFI-ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l-~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~ 165 (479)
..+...-+.|..+|||+|+ ++|.+.-.|++||+.+........+. ...|.-.-.+.|-..++.-..|.+|.+-....
T Consensus 48 fe~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlD--ae~V~feiLsDD~SK~v~L~~DR~IefHak~G 125 (703)
T KOG2321|consen 48 FEMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLD--AEVVDFEILSDDYSKSVFLQNDRTIEFHAKYG 125 (703)
T ss_pred cCCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeeccc--ccceeEEEeccchhhheEeecCceeeehhhcC
Confidence 4577888999999999986 67778889999999876533222222 23455555555666666666777776544322
Q ss_pred CCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeC
Q psy14815 166 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 245 (479)
Q Consensus 166 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 245 (479)
. ..... -+..-+.++++.-..-|.+++....|+-+++..+.- +..+....+.++++..++-..+|++|+.
T Consensus 126 ~---hy~~R---IP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrf----L~P~~~~~~~lN~v~in~~hgLla~Gt~ 195 (703)
T KOG2321|consen 126 R---HYRTR---IPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRF----LNPFETDSGELNVVSINEEHGLLACGTE 195 (703)
T ss_pred e---eeeee---cCcCCccccccCCCccEEEeecCcceEEEEcccccc----ccccccccccceeeeecCccceEEeccc
Confidence 1 11111 122345677776454466666667888899987653 5666667789999999999999999999
Q ss_pred CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc----ccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCc
Q psy14815 246 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH----HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDM 321 (479)
Q Consensus 246 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 321 (479)
+|.|..||.+.......+.. ...+..+ ....|+++.|+.+|-.+++|..+|.+.|||++..+
T Consensus 196 ~g~VEfwDpR~ksrv~~l~~---------~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~----- 261 (703)
T KOG2321|consen 196 DGVVEFWDPRDKSRVGTLDA---------ASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASK----- 261 (703)
T ss_pred CceEEEecchhhhhheeeec---------ccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCC-----
Confidence 99999999876544322111 1111111 23459999999999999999999999999999987
Q ss_pred eeeEEEeccccccccceeEEEecCCC--CCCCcccccHHHHHHHHHHhCCC-----------ccCCCCCcceeeeccCCC
Q psy14815 322 VSFDLVHTEHRAHNQDVNCVAWNPVV--PEPQKTNLTLHDVVRRLEAMAPL-----------SLAEPWDNVGLLIEPHNT 388 (479)
Q Consensus 322 ~~~~~~~~~~~~h~~~v~~~~~sp~~--~~l~~~~~~~~~~~~~l~~~~p~-----------~~a~~wd~~Gl~v~~~~~ 388 (479)
++...-.+...+|..+.|-+.+ ..+.+.. ..+++.+++.... ....-..+.|+++...+.
T Consensus 262 ----pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~D---k~~~kiWd~~~Gk~~asiEpt~~lND~C~~p~sGm~f~Ane~ 334 (703)
T KOG2321|consen 262 ----PLLVKDHGYELPIKKLDWQDTDQQNKVVSMD---KRILKIWDECTGKPMASIEPTSDLNDFCFVPGSGMFFTANES 334 (703)
T ss_pred ----ceeecccCCccceeeecccccCCCceEEecc---hHHhhhcccccCCceeeccccCCcCceeeecCCceEEEecCC
Confidence 3444434556799999998873 3333332 2344444432222 222234578888865553
Q ss_pred cCcccEEEEEecCCHH
Q psy14815 389 TKHIKNIMLTIDLTDE 404 (479)
Q Consensus 389 ~~~v~~il~~~d~t~~ 404 (479)
..-..-.+..|.+.|.
T Consensus 335 ~~m~~yyiP~LGPaPr 350 (703)
T KOG2321|consen 335 SKMHTYYIPSLGPAPR 350 (703)
T ss_pred CcceeEEccccCCCch
Confidence 3333444455655553
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.2e-11 Score=116.98 Aligned_cols=192 Identities=15% Similarity=0.197 Sum_probs=126.4
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCC---CcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGED---KNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
+.+..+...+.+.+|+|||++|+.++.+ ..|.+||+.+++....
T Consensus 183 ~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~--------------------------------- 229 (417)
T TIGR02800 183 QTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKV--------------------------------- 229 (417)
T ss_pred EEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEe---------------------------------
Confidence 3445566678888889998888876643 3677887765432110
Q ss_pred eEEeccccCCcEEEEEECCCCCEEEEE-ECCC--eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-CC-
Q psy14815 82 KAILSDGHQRTIRETAWSPCGNFIASA-SFDA--TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DK- 156 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~~~l~t~-~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg- 156 (479)
..+...+.+++|+||++.|+.. +.++ .|.+||+.+++.. .+..+........|+|+++.|+..+. ++
T Consensus 230 -----~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~---~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~ 301 (417)
T TIGR02800 230 -----ASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLT---RLTNGPGIDTEPSWSPDGKSIAFTSDRGGS 301 (417)
T ss_pred -----ecCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCCEE---ECCCCCCCCCCEEECCCCCEEEEEECCCCC
Confidence 1233455678999999877654 4443 6889999887533 33334444557789999998876654 33
Q ss_pred -cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCC---cEEEEecCCcccceEeeeeecCCCccEEEEE
Q psy14815 157 -SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD---TVKLFKEDKAEADWINFATLKSHTSTVWSLA 232 (479)
Q Consensus 157 -~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 232 (479)
.|.++|+.+.+. ..+..+........|+|++++++.++.++ .|.+||+.++.. ..+... .......
T Consensus 302 ~~iy~~d~~~~~~----~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~-----~~l~~~-~~~~~p~ 371 (417)
T TIGR02800 302 PQIYMMDADGGEV----RRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGE-----RVLTDT-GLDESPS 371 (417)
T ss_pred ceEEEEECCCCCE----EEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCe-----EEccCC-CCCCCce
Confidence 577777766531 23333445567889999999999888776 788899876432 112211 2234568
Q ss_pred EccCCCEEEEeeCCC
Q psy14815 233 FDRIGSRLATCSDDA 247 (479)
Q Consensus 233 ~~~~~~~l~s~~~dg 247 (479)
|+|++++|+..+.++
T Consensus 372 ~spdg~~l~~~~~~~ 386 (417)
T TIGR02800 372 FAPNGRMILYATTRG 386 (417)
T ss_pred ECCCCCEEEEEEeCC
Confidence 999999988777654
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.9e-10 Score=106.09 Aligned_cols=287 Identities=14% Similarity=0.237 Sum_probs=182.3
Q ss_pred ceEEEEECCCCCeEEEe-----eCC-----CcEEEEecccccccccccCCC---------ccceEEEeecCCcEEEecCC
Q psy14815 13 RVWNVSWNPQGTMISSC-----GED-----KNIRLWVMVIREPYEKLHGLP---------VETSLRQLVEDKNIRLWGKE 73 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~-----~~d-----g~v~iwd~~~~~~~~~~~~~~---------~~~~~~~~~~~~~i~~w~~~ 73 (479)
.++++.|||-|++|.|- ..+ -.+++|+++++.....+.... .+..+++-...+.+.+|+..
T Consensus 75 ~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~vet~~~~s~~q~k~Q~~W~~qfs~dEsl~arlv~nev~f~~~~ 154 (566)
T KOG2315|consen 75 KTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLVYNVETGVQRSQIQKKMQNGWVPQFSIDESLAARLVSNEVQFYDLG 154 (566)
T ss_pred eeeeeeecccccccccccccccccCCCCCCCceeeeeeccceehhheehhhhcCcccccccchhhhhhhhcceEEEEecC
Confidence 67889999999988762 122 347799999865554443322 22334444456788999888
Q ss_pred CCCCceeeeEEeccccCCcEEEEEECCCC--CEEEE-----EECCCeEEEEECCCCeEE---EeEEEeCCCCcEEEEEEc
Q psy14815 74 SFGNKFTAKAILSDGHQRTIRETAWSPCG--NFIAS-----ASFDATTAVWDKRSGQFE---CNATLEGHENEVKSVTWS 143 (479)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~--~~l~t-----~~~dg~i~iwd~~~~~~~---~~~~~~~~~~~v~~l~~~ 143 (479)
+..... ..-|...|+.+.+||.. ..+|+ .+.-+.|+||........ ....|- ...=..+.|+
T Consensus 155 ~f~~~~------~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFF--kadkvqm~WN 226 (566)
T KOG2315|consen 155 SFKTIQ------HKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFF--KADKVQMKWN 226 (566)
T ss_pred Ccccee------eeeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhcccc--ccceeEEEec
Confidence 522221 13367889999999963 34443 244568999987632111 111111 1222467888
Q ss_pred CCCCE-EE--EEeCC---------CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEE--EEcCCcEEEEecC
Q psy14815 144 KNGQF-LA--TCSRD---------KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS--ASYDDTVKLFKED 209 (479)
Q Consensus 144 ~~~~~-l~--~~~~d---------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~--~~~dg~i~i~d~~ 209 (479)
+-|+- |+ +..-| .++++.++.+. .+.-.+ ...++|.++.|+|+++.+++ |-.-..+.|||++
T Consensus 227 ~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~---s~~V~L-~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr 302 (566)
T KOG2315|consen 227 KLGTALLVLASTDVDKTNASYYGEQTLYLLATQGE---SVSVPL-LKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR 302 (566)
T ss_pred cCCceEEEEEEEeecCCCccccccceEEEEEecCc---eEEEec-CCCCCceEEEECCCCCEEEEEEecccceEEEEcCC
Confidence 86663 22 22223 25777777733 222222 23689999999999976655 4456789999998
Q ss_pred CcccceEeeeeecCCCccEEEEEEccCCCEEEEeeC---CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccE
Q psy14815 210 KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD---DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTI 286 (479)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 286 (479)
..- +. .-..++-+++-|+|.|++++.++- .|.+.|||.... +++..+... .-
T Consensus 303 ~~~-----v~--df~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~---------------K~i~~~~a~---~t 357 (566)
T KOG2315|consen 303 GKP-----VF--DFPEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNR---------------KLIAKFKAA---NT 357 (566)
T ss_pred CCE-----eE--eCCCCCccceEECCCCCEEEEeecCCCCCceEEEeccch---------------hhccccccC---Cc
Confidence 522 33 334567788999999999988774 479999998543 444444432 45
Q ss_pred EEEEecCCCCeEEEEeC------CCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCC
Q psy14815 287 YDISWCHLTDLIATACG------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP 348 (479)
Q Consensus 287 ~~l~~~~~~~~l~~~~~------dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~ 348 (479)
+-+.|+|||++++++.. |+.++||+..... +.... ..+....+.|-|-..
T Consensus 358 t~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~~----------l~~~~--f~sEL~qv~W~P~~~ 413 (566)
T KOG2315|consen 358 TVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGSL----------LHEKM--FKSELLQVEWRPFND 413 (566)
T ss_pred eEEEEcCCCcEEEEEeccccEEecCCeEEEEecCce----------eehhh--hhHhHhheeeeecCC
Confidence 56899999999998865 7899999998764 22211 111467788886543
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.1e-10 Score=113.26 Aligned_cols=199 Identities=18% Similarity=0.146 Sum_probs=123.9
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCC---CcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGED---KNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
+.+..+...+....|+|||+.|+..+.+ ..|.+||+.+++....
T Consensus 192 ~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l--------------------------------- 238 (430)
T PRK00178 192 VTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQI--------------------------------- 238 (430)
T ss_pred eEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEc---------------------------------
Confidence 3455566778888999999888776533 2477777765543111
Q ss_pred eEEeccccCCcEEEEEECCCCCEEEE-EECCC--eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-CC-
Q psy14815 82 KAILSDGHQRTIRETAWSPCGNFIAS-ASFDA--TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DK- 156 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~~~l~t-~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg- 156 (479)
......+....|+|||+.|+. ...+| .|.+||+.+++.. .+..+........|+|||+.++..+. +|
T Consensus 239 -----~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~---~lt~~~~~~~~~~~spDg~~i~f~s~~~g~ 310 (430)
T PRK00178 239 -----TNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLS---RVTNHPAIDTEPFWGKDGRTLYFTSDRGGK 310 (430)
T ss_pred -----cCCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeE---EcccCCCCcCCeEECCCCCEEEEEECCCCC
Confidence 111223446889999998874 44444 6888899988633 33344455667899999998776654 34
Q ss_pred -cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcC-C--cEEEEecCCcccceEeeeeecCCCccEEEEE
Q psy14815 157 -SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD-D--TVKLFKEDKAEADWINFATLKSHTSTVWSLA 232 (479)
Q Consensus 157 -~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-g--~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 232 (479)
.|.++|+.+++. ..+ ...........|+|+++.++..+.+ + .|.++|+.++.. ..+.. ........
T Consensus 311 ~~iy~~d~~~g~~-~~l---t~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~--~~lt~----~~~~~~p~ 380 (430)
T PRK00178 311 PQIYKVNVNGGRA-ERV---TFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSV--RILTD----TSLDESPS 380 (430)
T ss_pred ceEEEEECCCCCE-EEe---ecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCE--EEccC----CCCCCCce
Confidence 466667766532 211 1112223457899999998877653 3 478889887653 22211 11222468
Q ss_pred EccCCCEEEEeeCC-C--eEEEEec
Q psy14815 233 FDRIGSRLATCSDD-A--TVKIWKE 254 (479)
Q Consensus 233 ~~~~~~~l~s~~~d-g--~i~iwd~ 254 (479)
|+|+|++++..+.+ + .|.++++
T Consensus 381 ~spdg~~i~~~~~~~g~~~l~~~~~ 405 (430)
T PRK00178 381 VAPNGTMLIYATRQQGRGVLMLVSI 405 (430)
T ss_pred ECCCCCEEEEEEecCCceEEEEEEC
Confidence 99999998766543 3 3555554
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.9e-10 Score=106.39 Aligned_cols=229 Identities=13% Similarity=0.133 Sum_probs=131.1
Q ss_pred EEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEEeCCCCceee
Q psy14815 93 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDEYEC 171 (479)
Q Consensus 93 v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~ 171 (479)
-..+.++|||+++++++.||.|.++|+.+++ .+..++. .....++++++||+++++++ ..+.+.++|.++.+..+.
T Consensus 39 h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~--~v~~i~~-G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~ 115 (369)
T PF02239_consen 39 HAGLKFSPDGRYLYVANRDGTVSVIDLATGK--VVATIKV-GGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKT 115 (369)
T ss_dssp EEEEE-TT-SSEEEEEETTSEEEEEETTSSS--EEEEEE--SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEE
T ss_pred eeEEEecCCCCEEEEEcCCCeEEEEECCccc--EEEEEec-CCCcceEEEcCCCCEEEEEecCCCceeEeccccccceee
Confidence 3457799999999999999999999999997 5555654 34578999999999998776 589999999998754433
Q ss_pred eeeeec----cccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe-eC
Q psy14815 172 AAVINA----HIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC-SD 245 (479)
Q Consensus 172 ~~~~~~----~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~ 245 (479)
+..... ....+..+..+|....++..- +.+.|.+.|....+. .....+ ..........|+|++++++.+ ..
T Consensus 116 I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~--~~~~~i-~~g~~~~D~~~dpdgry~~va~~~ 192 (369)
T PF02239_consen 116 IPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKN--LKVTTI-KVGRFPHDGGFDPDGRYFLVAANG 192 (369)
T ss_dssp EE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSC--EEEEEE-E--TTEEEEEE-TTSSEEEEEEGG
T ss_pred cccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccc--cceeee-cccccccccccCcccceeeecccc
Confidence 322111 234567888888877555554 458888888776542 112222 234556788999999987664 45
Q ss_pred CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEec---cccccEEEE-------Eec--CCCCeEEEEeCCCeEEEcccC
Q psy14815 246 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG---HHGRTIYDI-------SWC--HLTDLIATACGDDAIRIFKEN 313 (479)
Q Consensus 246 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~l-------~~~--~~~~~l~~~~~dg~i~vw~~~ 313 (479)
+..|-++|..... .+..+.. .+..++..+ .|. ..+...++.-....+.+|+..
T Consensus 193 sn~i~viD~~~~k---------------~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~ 257 (369)
T PF02239_consen 193 SNKIAVIDTKTGK---------------LVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDY 257 (369)
T ss_dssp GTEEEEEETTTTE---------------EEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTT
T ss_pred cceeEEEeeccce---------------EEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhh
Confidence 6789999975432 2222211 111122221 121 223333333334466678877
Q ss_pred CCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 314 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
..+ .+.++. ...++ .-+..+|+++++...
T Consensus 258 ~wk---------vv~~I~-~~G~g-lFi~thP~s~~vwvd 286 (369)
T PF02239_consen 258 AWK---------VVKTIP-TQGGG-LFIKTHPDSRYVWVD 286 (369)
T ss_dssp BTS---------EEEEEE--SSSS---EE--TT-SEEEEE
T ss_pred cCe---------EEEEEE-CCCCc-ceeecCCCCccEEee
Confidence 776 444443 33444 677889999988443
|
... |
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.4e-11 Score=121.16 Aligned_cols=152 Identities=22% Similarity=0.349 Sum_probs=126.5
Q ss_pred EEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeee
Q psy14815 96 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVI 175 (479)
Q Consensus 96 v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 175 (479)
+-++++.-++++|+.-+.|.+|+....+ .-..+.+|.+.+.++.|+-||+++++.|.|.++|+|++.+.+... ...
T Consensus 139 ~g~s~~~~~i~~gsv~~~iivW~~~~dn--~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~--~~~ 214 (967)
T KOG0974|consen 139 IGDSAEELYIASGSVFGEIIVWKPHEDN--KPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLG--CTG 214 (967)
T ss_pred EeccCcEEEEEeccccccEEEEeccccC--CcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccC--ccc
Confidence 3456677899999999999999987433 222588999999999999999999999999999999999985433 356
Q ss_pred eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCC-ccEEEEEEccCCCEEEEeeCCCeEEEEec
Q psy14815 176 NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT-STVWSLAFDRIGSRLATCSDDATVKIWKE 254 (479)
Q Consensus 176 ~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 254 (479)
-+|...+..++|.|+ .+++++.|-+.++|+..... ...+..|. ..+..++..++...++|++.|+.+++|++
T Consensus 215 fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~~~~-----l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l 287 (967)
T KOG0974|consen 215 FGHSARVWACCFLPN--RIITVGEDCTCRVWGVNGTQ-----LEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDL 287 (967)
T ss_pred ccccceeEEEEeccc--eeEEeccceEEEEEecccce-----ehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhh
Confidence 789999999999987 89999999999999766433 33566664 46899999998889999999999999998
Q ss_pred cCCC
Q psy14815 255 YKPG 258 (479)
Q Consensus 255 ~~~~ 258 (479)
....
T Consensus 288 ~~r~ 291 (967)
T KOG0974|consen 288 NGRG 291 (967)
T ss_pred hccc
Confidence 5543
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.7e-10 Score=109.42 Aligned_cols=160 Identities=12% Similarity=0.102 Sum_probs=98.2
Q ss_pred cEEEEEECCCCCEEEEEEC-----CCeEEEEECCCCeE-EEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEEeC
Q psy14815 92 TIRETAWSPCGNFIASASF-----DATTAVWDKRSGQF-ECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVG 164 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~-----dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vwd~~ 164 (479)
.....+|+|||+.|+..+. +-.+.+|++..+.. ................+|+|||+.|+..+ .+|...+|.+.
T Consensus 232 ~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~ 311 (428)
T PRK01029 232 NQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQ 311 (428)
T ss_pred CccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEE
Confidence 3456799999998887653 22344577765310 11222222223446789999999877665 46766666543
Q ss_pred CCCceeeeeeeeccccceeEEEEecCCCEEEEEEcC---CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE
Q psy14815 165 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD---DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 165 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 241 (479)
....-.....+..+...+....|+|+|+.|+..+.+ ..|.+||+.+++. ..+......+....|+|||+.|+
T Consensus 312 ~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~-----~~Lt~~~~~~~~p~wSpDG~~L~ 386 (428)
T PRK01029 312 IDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRD-----YQLTTSPENKESPSWAIDSLHLV 386 (428)
T ss_pred CcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCe-----EEccCCCCCccceEECCCCCEEE
Confidence 210001123333444566788999999988876543 3689999987763 22333334567789999999887
Q ss_pred EeeC---CCeEEEEeccC
Q psy14815 242 TCSD---DATVKIWKEYK 256 (479)
Q Consensus 242 s~~~---dg~i~iwd~~~ 256 (479)
..+. ...|.++|+..
T Consensus 387 f~~~~~g~~~L~~vdl~~ 404 (428)
T PRK01029 387 YSAGNSNESELYLISLIT 404 (428)
T ss_pred EEECCCCCceEEEEECCC
Confidence 5432 34677777743
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.6e-11 Score=101.31 Aligned_cols=264 Identities=15% Similarity=0.150 Sum_probs=174.2
Q ss_pred cCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECC---CCC-EEEEEECCCeEEEEECCCCeEEEeEEEeCCC----
Q psy14815 63 EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP---CGN-FIASASFDATTAVWDKRSGQFECNATLEGHE---- 134 (479)
Q Consensus 63 ~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~---- 134 (479)
..|++.++++.+..... ...+.....+.+..+.|.. ++. .++-+..+|.|.++...... ....+++-.
T Consensus 44 R~Gkl~Lys~~d~~~~~--l~~~q~~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~--ss~~L~~ls~~ki 119 (339)
T KOG0280|consen 44 RSGKLHLYSLEDMKLSP--LDTLQCTDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDE--SSVHLRGLSSKKI 119 (339)
T ss_pred eccceEEEeecccccCc--cceeeeecccccceeeeeeccCCccceeeeccccceEEEEeeccce--eeeeecccchhhh
Confidence 34555666655322222 1111123345677777764 455 56667778999999765432 222222211
Q ss_pred --CcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCc
Q psy14815 135 --NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKA 211 (479)
Q Consensus 135 --~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~ 211 (479)
....++.|++.+..++++..+|.+.+-+.... ..+..+..+.|...+....|+. +.+++.+|+.|+.+..||+|.+
T Consensus 120 ~~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~-~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p 198 (339)
T KOG0280|consen 120 SVVEALSLDISTSGTKIFVSDSRGSISGVYETEM-VLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIP 198 (339)
T ss_pred hheeeeEEEeeccCceEEEEcCCCcEEEEeccee-eeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCC
Confidence 13458889999999999999999996665443 2355567889999999999987 4478999999999999999954
Q ss_pred ccceEeeeeecCCCccEEEEEEcc-CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEE
Q psy14815 212 EADWINFATLKSHTSTVWSLAFDR-IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS 290 (479)
Q Consensus 212 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 290 (479)
+. ......+-|...|.++.-+| .+.++++|+.|-.|++||.+...++.. .....+.|+.+.
T Consensus 199 ~~--~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~----------------~~~v~GGVWRi~ 260 (339)
T KOG0280|consen 199 KT--FIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLF----------------KAKVGGGVWRIK 260 (339)
T ss_pred cc--eeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccc----------------cCccccceEEEE
Confidence 42 22233556888999998876 467899999999999999986654321 111246899999
Q ss_pred ecCCCC-eEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 291 WCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 291 ~~~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
++|.-. .++.++.-+-.+|-+.+.+.. +++......+.|.+-+..-.|.....+||..+
T Consensus 261 ~~p~~~~~lL~~CMh~G~ki~~~~~~~~-----e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCs 320 (339)
T KOG0280|consen 261 HHPEIFHRLLAACMHNGAKILDSSDKVL-----EFQIVLPSDKIHDSLCYGGDWDSKDSFLATCS 320 (339)
T ss_pred ecchhhhHHHHHHHhcCceEEEeccccc-----chheeeeccccccceeeccccccccceeeeee
Confidence 998533 333344445567777766542 13345566678888888888844444555543
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.4e-10 Score=112.38 Aligned_cols=196 Identities=11% Similarity=0.099 Sum_probs=115.8
Q ss_pred cccccceEEEEECCCCCeEEEeeC-CC--cEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEE
Q psy14815 8 KGHQGRVWNVSWNPQGTMISSCGE-DK--NIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAI 84 (479)
Q Consensus 8 ~~h~~~V~~l~~s~~~~~l~t~~~-dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~ 84 (479)
..+...+.+..|+|||+.|+..+. ++ .|.+||+.+++... +
T Consensus 214 ~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-l----------------------------------- 257 (448)
T PRK04792 214 LRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-V----------------------------------- 257 (448)
T ss_pred ecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-e-----------------------------------
Confidence 344556777888888888776643 23 36666665443211 0
Q ss_pred eccccCCcEEEEEECCCCCEEEE-EECCC--eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-CCc--E
Q psy14815 85 LSDGHQRTIRETAWSPCGNFIAS-ASFDA--TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DKS--V 158 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~~~~l~t-~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~--i 158 (479)
..........+|+|||+.|+. .+.+| .|.++|+.+++.. .+..+........|+|||+.++..+. ++. |
T Consensus 258 --t~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~---~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~I 332 (448)
T PRK04792 258 --TSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALT---RITRHRAIDTEPSWHPDGKSLIFTSERGGKPQI 332 (448)
T ss_pred --cCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeE---ECccCCCCccceEECCCCCEEEEEECCCCCceE
Confidence 011122346789999998865 45566 4778899887633 33334455678899999998876654 444 5
Q ss_pred EEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc-CC--cEEEEecCCcccceEeeeeecCCCccEEEEEEcc
Q psy14815 159 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DD--TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR 235 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 235 (479)
.++|+.+++. .. +..........+|+|+|++|+..+. ++ .|.++|+.++.. .. +... .......|+|
T Consensus 333 y~~dl~~g~~-~~---Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~--~~---lt~~-~~d~~ps~sp 402 (448)
T PRK04792 333 YRVNLASGKV-SR---LTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAM--QV---LTST-RLDESPSVAP 402 (448)
T ss_pred EEEECCCCCE-EE---EecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCe--EE---ccCC-CCCCCceECC
Confidence 5566665532 11 2112222345789999998887665 34 355567766542 11 2211 1122457999
Q ss_pred CCCEEEEeeC-CCe--EEEEec
Q psy14815 236 IGSRLATCSD-DAT--VKIWKE 254 (479)
Q Consensus 236 ~~~~l~s~~~-dg~--i~iwd~ 254 (479)
+|++|+..+. ++. +.+++.
T Consensus 403 dG~~I~~~~~~~g~~~l~~~~~ 424 (448)
T PRK04792 403 NGTMVIYSTTYQGKQVLAAVSI 424 (448)
T ss_pred CCCEEEEEEecCCceEEEEEEC
Confidence 9998876554 333 555564
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.7e-11 Score=106.02 Aligned_cols=255 Identities=15% Similarity=0.211 Sum_probs=167.6
Q ss_pred cccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc------------CCcEEEEEECCCC--CEEEEEECC
Q psy14815 46 YEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH------------QRTIRETAWSPCG--NFIASASFD 111 (479)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~------------~~~v~~v~~~~~~--~~l~t~~~d 111 (479)
+..+.....+..++++..+|.+.++.-+.............+.| ...|..+.|.+++ ..++..+.|
T Consensus 28 is~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlstNd 107 (433)
T KOG1354|consen 28 ISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLSTND 107 (433)
T ss_pred eeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEecCC
Confidence 34444456678888999999999887664332111111112222 3578899999865 467777889
Q ss_pred CeEEEEECCCCeEEE---------------------------------eEEE-eCCCCcEEEEEEcCCCCEEEEEeCCCc
Q psy14815 112 ATTAVWDKRSGQFEC---------------------------------NATL-EGHENEVKSVTWSKNGQFLATCSRDKS 157 (479)
Q Consensus 112 g~i~iwd~~~~~~~~---------------------------------~~~~-~~~~~~v~~l~~~~~~~~l~~~~~dg~ 157 (479)
.+|++|.+....... .+.+ .+|..-|.+++++.|...++++ .|=.
T Consensus 108 ktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA-DdLR 186 (433)
T KOG1354|consen 108 KTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA-DDLR 186 (433)
T ss_pred cceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec-ccee
Confidence 999999875432111 0111 2577789999999999888877 6678
Q ss_pred EEEEEeCCCCceeeeeeeecc-----ccceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEe------------ee
Q psy14815 158 VWVWEVGEEDEYECAAVINAH-----IQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWIN------------FA 219 (479)
Q Consensus 158 i~vwd~~~~~~~~~~~~~~~~-----~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~------------~~ 219 (479)
|.+|++.-..+.-.+..++.+ ..-|++..|+|. -+.++-.+..|+|++-|++....--.. ..
T Consensus 187 INLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rs 266 (433)
T KOG1354|consen 187 INLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRS 266 (433)
T ss_pred eeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcchh
Confidence 999998754322222222222 234788999994 477888889999999999853310000 00
Q ss_pred eecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc-----------cccc---
Q psy14815 220 TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-----------HGRT--- 285 (479)
Q Consensus 220 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~--- 285 (479)
-+..--..|..+.|+++|+++++-+ --+|++||+.....+ +.++..| ....
T Consensus 267 ffseiIsSISDvKFs~sGryilsRD-yltvk~wD~nme~~p--------------v~t~~vh~~lr~kLc~lYEnD~Ifd 331 (433)
T KOG1354|consen 267 FFSEIISSISDVKFSHSGRYILSRD-YLTVKLWDLNMEAKP--------------VETYPVHEYLRSKLCSLYENDAIFD 331 (433)
T ss_pred hHHHHhhhhhceEEccCCcEEEEec-cceeEEEeccccCCc--------------ceEEeehHhHHHHHHHHhhccchhh
Confidence 1111234688999999999998764 368999999554433 2333332 0112
Q ss_pred EEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 286 IYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 286 i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
-..++|+-++.++++|+....+++|+...+.
T Consensus 332 KFec~~sg~~~~v~TGsy~n~frvf~~~~gs 362 (433)
T KOG1354|consen 332 KFECSWSGNDSYVMTGSYNNVFRVFNLARGS 362 (433)
T ss_pred eeEEEEcCCcceEecccccceEEEecCCCCc
Confidence 2457899999999999999999999976654
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=99.35 E-value=5.1e-09 Score=95.74 Aligned_cols=245 Identities=11% Similarity=0.081 Sum_probs=147.4
Q ss_pred ECCCCCeEEEeeC----------CCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 19 WNPQGTMISSCGE----------DKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 19 ~s~~~~~l~t~~~----------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
+|||++.|+.+.. +..|.+||..+.+.+..+...+... ..
T Consensus 53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~------------------------------~~ 102 (352)
T TIGR02658 53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPR------------------------------FL 102 (352)
T ss_pred ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCch------------------------------hh
Confidence 8999998877654 6789999999888876653211000 00
Q ss_pred cCCcEEEEEECCCCCEEEEEEC--CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCC
Q psy14815 89 HQRTIRETAWSPCGNFIASASF--DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 166 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~ 166 (479)
.......++++|||++++.... ++.|.+.|+.+++. +..+.-. +...-...+ +.. +.+-+.||......+...
T Consensus 103 ~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kv--v~ei~vp-~~~~vy~t~-e~~-~~~~~~Dg~~~~v~~d~~ 177 (352)
T TIGR02658 103 VGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAF--VRMMDVP-DCYHIFPTA-NDT-FFMHCRDGSLAKVGYGTK 177 (352)
T ss_pred ccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcE--EEEEeCC-CCcEEEEec-CCc-cEEEeecCceEEEEecCC
Confidence 1233456889999999987763 68999999999973 3444321 111111222 222 223345565555444433
Q ss_pred Cceeeee--eeecccccee-EEEEec-CCCEEEEEEcCCcEEEEecCCcccceEe-eeeec-------CCCccEEEEEEc
Q psy14815 167 DEYECAA--VINAHIQDVK-KVRFHP-FDNILASASYDDTVKLFKEDKAEADWIN-FATLK-------SHTSTVWSLAFD 234 (479)
Q Consensus 167 ~~~~~~~--~~~~~~~~v~-~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~-------~~~~~v~~~~~~ 234 (479)
....... .+..-..++. .-.|.+ ++++++...+ |.|.+.|+......... ...+. ...+...-++++
T Consensus 178 g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~ 256 (352)
T TIGR02658 178 GNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYH 256 (352)
T ss_pred CceEEeeeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEc
Confidence 2211111 1111000000 004456 7777777666 99999997554322111 11111 123444559999
Q ss_pred cCCCEEEEee----------CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC-eEEEEe-
Q psy14815 235 RIGSRLATCS----------DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATAC- 302 (479)
Q Consensus 235 ~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~- 302 (479)
++++.++... ..+.|.++|.. +.+.+..+.. +..+..++++||++ +|++.+
T Consensus 257 ~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~---------------t~kvi~~i~v--G~~~~~iavS~Dgkp~lyvtn~ 319 (352)
T TIGR02658 257 RARDRIYLLADQRAKWTHKTASRFLFVVDAK---------------TGKRLRKIEL--GHEIDSINVSQDAKPLLYALST 319 (352)
T ss_pred CCCCEEEEEecCCccccccCCCCEEEEEECC---------------CCeEEEEEeC--CCceeeEEECCCCCeEEEEeCC
Confidence 9999888743 12478888873 3455666664 45899999999999 777666
Q ss_pred CCCeEEEcccCCCC
Q psy14815 303 GDDAIRIFKENPEA 316 (479)
Q Consensus 303 ~dg~i~vw~~~~~~ 316 (479)
.++.|.++|..+++
T Consensus 320 ~s~~VsViD~~t~k 333 (352)
T TIGR02658 320 GDKTLYIFDAETGK 333 (352)
T ss_pred CCCcEEEEECcCCe
Confidence 57889999999987
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.35 E-value=1e-09 Score=100.09 Aligned_cols=290 Identities=12% Similarity=0.173 Sum_probs=189.1
Q ss_pred cceEEEEECCCCCeEEEeeCCC---------------cEEEEecccccccccccCCCcc--ce-EEEee---------cC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDK---------------NIRLWVMVIREPYEKLHGLPVE--TS-LRQLV---------ED 64 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg---------------~v~iwd~~~~~~~~~~~~~~~~--~~-~~~~~---------~~ 64 (479)
..|.-+.|||.++||.|=+..+ .+.+||+.+|..+..+...+.. .. ++-.+ ..
T Consensus 72 ~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~ 151 (561)
T COG5354 72 PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVG 151 (561)
T ss_pred CCceecccCcccceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhhcc
Confidence 4588899999999999966433 4999999999988877665433 11 22221 33
Q ss_pred CcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCC--CEEEE-----EECCCeEEEEECCCCeEEEeEEEeCCCCcE
Q psy14815 65 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCG--NFIAS-----ASFDATTAVWDKRSGQFECNATLEGHENEV 137 (479)
Q Consensus 65 ~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~--~~l~t-----~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v 137 (479)
..+.++++...-....... -....|....|+|.+ ..|++ .+..+.+++|.+..+.......+..- .=
T Consensus 152 ~sl~i~e~t~n~~~~p~~~----lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~--~~ 225 (561)
T COG5354 152 SSLYIHEITDNIEEHPFKN----LRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKV--SG 225 (561)
T ss_pred CeEEEEecCCccccCchhh----ccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEee--cc
Confidence 5677777531111111111 124678899999953 44444 35578999999987764444444322 22
Q ss_pred EEEEEcCCCCEEEEEeC-----------CCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEE--cCCcEE
Q psy14815 138 KSVTWSKNGQFLATCSR-----------DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS--YDDTVK 204 (479)
Q Consensus 138 ~~l~~~~~~~~l~~~~~-----------dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~--~dg~i~ 204 (479)
..+.|.+.|++++.--. ...+.+++++... +.....-.++|...+|.|.++.+++.+ .+..+.
T Consensus 226 ~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~----i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s 301 (561)
T COG5354 226 VQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERS----IPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVS 301 (561)
T ss_pred cEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccc----cceeccccccceeeeecccCCceeEEeccccccee
Confidence 47889998887664321 2457888887532 222224578999999999887766554 678899
Q ss_pred EEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCC---CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc
Q psy14815 205 LFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD---ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH 281 (479)
Q Consensus 205 i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (479)
++|++..- . +......=..+.|+|.+++++.++-| |.+.+||.. ....+...+.+.
T Consensus 302 ~~~lr~Nl-----~--~~~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~--------------~rf~~~~~~~~~ 360 (561)
T COG5354 302 VFDLRGNL-----R--FYFPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPA--------------GRFKVAGAFNGL 360 (561)
T ss_pred ecccccce-----E--EecCCcccccccccCcccEEEEecCCccccceEEeccC--------------CceEEEEEeecC
Confidence 99998532 1 22233444568899999999987754 689999862 333455455553
Q ss_pred ccccEEEEEecCCCCeEEEEe------CCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 282 HGRTIYDISWCHLTDLIATAC------GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 282 ~~~~i~~l~~~~~~~~l~~~~------~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
...-+.|+|+++++.+.. .|..|+|||+.... .. ..+.+.|.|.+++...+
T Consensus 361 ---n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~----------~f--------el~~~~W~p~~~~~tts 417 (561)
T COG5354 361 ---NTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAK----------VF--------ELTNITWDPSGQYVTTS 417 (561)
T ss_pred ---CceEeeccCCceEEEecCCCcccccCcceEEEEecCch----------hh--------hhhhccccCCcccceee
Confidence 455678999999887763 37889999998765 11 34567788877766433
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.35 E-value=5.9e-11 Score=110.08 Aligned_cols=173 Identities=12% Similarity=0.108 Sum_probs=134.5
Q ss_pred CCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEe--------------------cCCCEEEEEEcCCcE
Q psy14815 144 KNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH--------------------PFDNILASASYDDTV 203 (479)
Q Consensus 144 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~--------------------~~~~~l~~~~~dg~i 203 (479)
|...++|....||.+++||...++..+.+.....-.+..++..|. .+...++-|...|.|
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v 82 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSV 82 (541)
T ss_pred chhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccE
Confidence 345689999999999999998875433333322223344444442 123578888999999
Q ss_pred EEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccc
Q psy14815 204 KLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 283 (479)
Q Consensus 204 ~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (479)
.+|+...++..+ ...-..|.+.|.++.++.+-..|.+++.|+.+..|+.. ....++.+... .
T Consensus 83 ~~ys~~~g~it~--~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~---------------~~~~~~~~~~~-~ 144 (541)
T KOG4547|consen 83 LLYSVAGGEITA--KLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEK---------------EKVIIRIWKEQ-K 144 (541)
T ss_pred EEEEecCCeEEE--EEecCCCCCcceeeecccccCceEecCCceeEEEEecc---------------cceeeeeeccC-C
Confidence 999999887532 22335799999999999999999999999999999973 33556666665 6
Q ss_pred ccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCC
Q psy14815 284 RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV 346 (479)
Q Consensus 284 ~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 346 (479)
..+.+++.+||++.+++++ +.|++||+++++ +...+.+|.++|++++|..+
T Consensus 145 ~~~~sl~is~D~~~l~~as--~~ik~~~~~~ke----------vv~~ftgh~s~v~t~~f~~~ 195 (541)
T KOG4547|consen 145 PLVSSLCISPDGKILLTAS--RQIKVLDIETKE----------VVITFTGHGSPVRTLSFTTL 195 (541)
T ss_pred CccceEEEcCCCCEEEecc--ceEEEEEccCce----------EEEEecCCCcceEEEEEEEe
Confidence 7899999999999999986 699999999998 55556799999999999988
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.4e-11 Score=116.61 Aligned_cols=290 Identities=17% Similarity=0.276 Sum_probs=197.5
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEecccc-cccc-------------cccCCCccceEEEeecCCcEEEecCCCCC
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIR-EPYE-------------KLHGLPVETSLRQLVEDKNIRLWGKESFG 76 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~-~~~~-------------~~~~~~~~~~~~~~~~~~~i~~w~~~~~~ 76 (479)
.+++.++..+|.|+-+++++.-| +.+-|+... .+-. .+..++..+.-+...+...-.+|++..
T Consensus 24 ~~~~~a~si~p~grdi~lAsr~g-l~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~-- 100 (1081)
T KOG0309|consen 24 DGGFNAVSINPSGRDIVLASRQG-LYIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAK-- 100 (1081)
T ss_pred cCcccceeeccccchhhhhhhcC-eEEEeccCCCCCceeeeccCcchhcceecccCCCCceeEEecCcchhhhhhhhc--
Confidence 46788899999999999998877 445555432 2111 112234444445555666677898873
Q ss_pred CceeeeEEeccccCCcEEEEEECCC-CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy14815 77 NKFTAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 155 (479)
Q Consensus 77 ~~~~~~~~~~~~~~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d 155 (479)
...........+|...|+.+.|+|. -..+++++.|-.+..||+++.. .++.....-......++|+.....+.+.+..
T Consensus 101 ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~-~p~ys~~~w~s~asqVkwnyk~p~vlasshg 179 (1081)
T KOG0309|consen 101 SSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPH-RPFYSTSSWRSAASQVKWNYKDPNVLASSHG 179 (1081)
T ss_pred CCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCC-cceeeeecccccCceeeecccCcchhhhccC
Confidence 3334555567899999999999995 4688999999999999999876 3455555555667889999855455566677
Q ss_pred CcEEEEEeCCCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEc
Q psy14815 156 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD 234 (479)
Q Consensus 156 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~ 234 (479)
..|++||.+.+. .++..+++|...|+.++|+. ....+.+.+.||+|+.||..+....+... .....+|..-.+.
T Consensus 180 ~~i~vwd~r~gs--~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~---vtt~~piw~~r~~ 254 (1081)
T KOG0309|consen 180 NDIFVWDLRKGS--TPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRT---VTTNFPIWRGRYL 254 (1081)
T ss_pred CceEEEeccCCC--cceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccccccccccee---ccccCcceecccc
Confidence 889999999886 45667778888999999876 33568889999999999998765433222 2344567777777
Q ss_pred cCCCEEEE--eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCC----------CeEEEEe
Q psy14815 235 RIGSRLAT--CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT----------DLIATAC 302 (479)
Q Consensus 235 ~~~~~l~s--~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~----------~~l~~~~ 302 (479)
|-|+-.+. --.+..+.+++.+........ .....++.++.|| ...|....|-..+ -.|++=+
T Consensus 255 Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~-----~~~~~pVh~F~GH-~D~V~eFlWR~r~e~~~d~d~rdfQLVTWS 328 (1081)
T KOG0309|consen 255 PFGEGYCIMPMVGGNMVPQLRCENSDLEWNV-----FDLNTPVHTFVGH-DDVVLEFLWRKRKECDGDYDSRDFQLVTWS 328 (1081)
T ss_pred ccCceeEeccccCCeeeeeccccchhhhhcc-----ccCCcceeeecCc-chHHHHHhhhhcccccCCCCccceeEEEee
Confidence 75543222 222335666655443322110 0123568899998 6677666664321 1589999
Q ss_pred CCCeEEEcccCCC
Q psy14815 303 GDDAIRIFKENPE 315 (479)
Q Consensus 303 ~dg~i~vw~~~~~ 315 (479)
.|..+++|-+...
T Consensus 329 kD~~lrlWpI~~~ 341 (1081)
T KOG0309|consen 329 KDQTLRLWPIDSQ 341 (1081)
T ss_pred cCCceEeeeccHH
Confidence 9999999987653
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=6e-12 Score=129.72 Aligned_cols=195 Identities=14% Similarity=0.191 Sum_probs=156.8
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCC
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~ 165 (479)
...+-..|.++.-+|...+.+||+.||.+++|....++........+. ..|+.+.|+.+|+.+..+..||.+.+|....
T Consensus 2204 ~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~-s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~p 2282 (2439)
T KOG1064|consen 2204 IKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGN-SRVTRSRFNHQGNKFGIVDGDGDLSLWQASP 2282 (2439)
T ss_pred eecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCc-chhhhhhhcccCCceeeeccCCceeecccCC
Confidence 345667889999999999999999999999999988875544444444 7899999999999999999999999999983
Q ss_pred CCceeeeeeeeccccceeEEEEecCCCEEEEEE---cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 166 EDEYECAAVINAHIQDVKKVRFHPFDNILASAS---YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 166 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
++....+.|....+.+.|-. ..+++++ .++.+.+||.......+ .+. ..|.+.++++++-|..+.|++
T Consensus 2283 ----k~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s-~v~--~~H~~gaT~l~~~P~~qllis 2353 (2439)
T KOG1064|consen 2283 ----KPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNS-LVH--TCHDGGATVLAYAPKHQLLIS 2353 (2439)
T ss_pred ----cceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccc-eee--eecCCCceEEEEcCcceEEEe
Confidence 56667788998888888874 6677765 56889999987544321 222 789999999999999999999
Q ss_pred eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 243 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
|+.+|.|++||++..+.. ++++ . +. ...++++|+..|.++||++....
T Consensus 2354 ggr~G~v~l~D~rqrql~---------------h~~~------~----~~-~~~~f~~~ss~g~ikIw~~s~~~ 2401 (2439)
T KOG1064|consen 2354 GGRKGEVCLFDIRQRQLR---------------HTFQ------A----LD-TREYFVTGSSEGNIKIWRLSEFG 2401 (2439)
T ss_pred cCCcCcEEEeehHHHHHH---------------HHhh------h----hh-hhheeeccCcccceEEEEccccc
Confidence 999999999998654322 1111 1 33 56689999999999999998765
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=8.9e-10 Score=101.44 Aligned_cols=348 Identities=14% Similarity=0.226 Sum_probs=199.1
Q ss_pred EEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEE
Q psy14815 15 WNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 94 (479)
Q Consensus 15 ~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~ 94 (479)
+-+.|||.|.||+|--..| |.+|-=++-..+..+ .| ..|.
T Consensus 214 tyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF--------------------------------------~H-p~Vq 253 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRF--------------------------------------YH-PGVQ 253 (698)
T ss_pred eeEEecCCceEEEEEeccc-eeeecCccHHHHHhc--------------------------------------cC-CCce
Confidence 4588999999999998776 889953333333222 23 4688
Q ss_pred EEEECCCCCEEEEEEC-----------CCeEEEEECCCCeEEEeEEEeC--CCCcE-EEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 95 ETAWSPCGNFIASASF-----------DATTAVWDKRSGQFECNATLEG--HENEV-KSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 95 ~v~~~~~~~~l~t~~~-----------dg~i~iwd~~~~~~~~~~~~~~--~~~~v-~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
-+.|||..+||+|-+. ...++|||+.+|. ....+.. ....+ .-..||.|++++|--.. .+|.|
T Consensus 254 ~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~--lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisI 330 (698)
T KOG2314|consen 254 FIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGL--LKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISI 330 (698)
T ss_pred eeecCCccceEEEecCCccccCcccCCCceEEEEEccccc--hhcceeccCCCccccceEEeccCCceeEEecc-ceEEE
Confidence 8999999999999654 2589999999996 3344433 22222 34679999999887766 56889
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcC-----CcEEEEecCCcccceEeeeeecCCCccEEEEEEcc
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR 235 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 235 (479)
|+.... ..+..-.-....|....|+|.+++||-=+.. .++.+-.+.+... +++..-+.-.=..+-|-.
T Consensus 331 yEtpsf---~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~----iRt~nlfnVsDckLhWQk 403 (698)
T KOG2314|consen 331 YETPSF---MLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKRE----IRTKNLFNVSDCKLHWQK 403 (698)
T ss_pred EecCce---eeecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccce----eeeccceeeeccEEEecc
Confidence 987653 2222222234568889999998887754422 2355555543332 333333333333566777
Q ss_pred CCCEEEEee----------CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC-
Q psy14815 236 IGSRLATCS----------DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD- 304 (479)
Q Consensus 236 ~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d- 304 (479)
+|.+|+.-- .-..+.|+.++...-+ +..+.- ...|...+|-|.|..+++-+..
T Consensus 404 ~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIp--------------ve~vel--ke~vi~FaWEP~gdkF~vi~g~~ 467 (698)
T KOG2314|consen 404 SGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIP--------------VEVVEL--KESVIAFAWEPHGDKFAVISGNT 467 (698)
T ss_pred CCcEEEEEEEeeccccccceEeeEEEEEeeccCCC--------------ceeeec--chheeeeeeccCCCeEEEEEccc
Confidence 788876431 1224556665443322 222222 5578999999999977766543
Q ss_pred --CeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcccc------------cHHHHHHHHHHhCCC
Q psy14815 305 --DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTNL------------TLHDVVRRLEAMAPL 370 (479)
Q Consensus 305 --g~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~------------~~~~~~~~l~~~~p~ 370 (479)
.++.+|.+.+.. ..+.++..+. ....+.+.|||.|++++.+.+ ...++...--.-.+.
T Consensus 468 ~k~tvsfY~~e~~~-----~~~~lVk~~d---k~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh~~ 539 (698)
T KOG2314|consen 468 VKNTVSFYAVETNI-----KKPSLVKELD---KKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEHFA 539 (698)
T ss_pred cccceeEEEeecCC-----Cchhhhhhhc---ccccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCccccc
Confidence 578999888532 1222333332 356788999999999854421 111111111111222
Q ss_pred ccCCCCCcceeeeccCC--CcCccc-EEEEEecCCHHHHHHHHHcCCCEEEEeCCCCcccccccCcCChhhHHHHH
Q psy14815 371 SLAEPWDNVGLLIEPHN--TTKHIK-NIMLTIDLTDEVLKEAVENGTDLIIAYHPPIFAPLKRVTNDKWKERVVST 443 (479)
Q Consensus 371 ~~a~~wd~~Gl~v~~~~--~~~~v~-~il~~~d~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~ 443 (479)
...-.||+.|--|.+.. -...+. +.-+.-=-...+.+.-+++=+++ +|||=-..-....+++.|.+
T Consensus 540 at~veWDPtGRYvvT~ss~wrhk~d~GYri~tfqGrll~~~~i~~f~qF-------~WRPRPps~LS~e~~KkIkK 608 (698)
T KOG2314|consen 540 ATEVEWDPTGRYVVTSSSSWRHKVDNGYRIFTFQGRLLKEDIIDRFKQF-------LWRPRPPSLLSEEKQKKIKK 608 (698)
T ss_pred cccceECCCCCEEEEeeehhhhccccceEEEEeecHHHHHHHHHHHHhh-------ccCCCCCcccCHHHHHHHHH
Confidence 33347999997774332 111221 22222222334445555655554 56662222233334444443
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.9e-08 Score=90.07 Aligned_cols=205 Identities=17% Similarity=0.174 Sum_probs=141.8
Q ss_pred CCCCCeEEEeeCCCcEEEEecccccccccccC----------------------CCccceEEEeecCCcEEEecCCCCCC
Q psy14815 20 NPQGTMISSCGEDKNIRLWVMVIREPYEKLHG----------------------LPVETSLRQLVEDKNIRLWGKESFGN 77 (479)
Q Consensus 20 s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~i~~w~~~~~~~ 77 (479)
+.||+.++-. .-|.|.+||.++....+.--+ ...+...++..+.|+..+.+...
T Consensus 275 nsDGkrIvFq-~~GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSRGkaFi~~~~~--- 350 (668)
T COG4946 275 NSDGKRIVFQ-NAGDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSRGKAFIMRPWD--- 350 (668)
T ss_pred CCCCcEEEEe-cCCcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEecCcEEEECCCC---
Confidence 4577777654 467899998765443221111 11233445555566666655431
Q ss_pred ceeeeEEeccccCCcEEEEEECCCCCEEEEEECCC-eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC
Q psy14815 78 KFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA-TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 156 (479)
Q Consensus 78 ~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg 156 (479)
......++...|.-..+..+++-++.|..|| .+-|+|..+++ ...+...-+.|.++..+++|++++++....
T Consensus 351 ----~~~iqv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e---~kr~e~~lg~I~av~vs~dGK~~vvaNdr~ 423 (668)
T COG4946 351 ----GYSIQVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGE---VKRIEKDLGNIEAVKVSPDGKKVVVANDRF 423 (668)
T ss_pred ----CeeEEcCCCCceEEEEEccCCcceEEeccCCceEEEEecCCce---EEEeeCCccceEEEEEcCCCcEEEEEcCce
Confidence 1122357788899999998888999999999 99999999985 445566678899999999999999999999
Q ss_pred cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCC----cEEEEecCCcccceEeeeeecCCCccEEEEE
Q psy14815 157 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD----TVKLFKEDKAEADWINFATLKSHTSTVWSLA 232 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 232 (479)
.+.+.|+.+++. ...-+...+-|+.+.|+|+++++|-+--+| .|++||+..++. ..+.+-.+| =.+-+
T Consensus 424 el~vididngnv---~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Ki--y~vTT~ta~---DfsPa 495 (668)
T COG4946 424 ELWVIDIDNGNV---RLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKI--YDVTTPTAY---DFSPA 495 (668)
T ss_pred EEEEEEecCCCe---eEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeE--EEecCCccc---ccCcc
Confidence 999999998842 222234456799999999999999887655 589999987663 112222222 23457
Q ss_pred EccCCCEEEEe
Q psy14815 233 FDRIGSRLATC 243 (479)
Q Consensus 233 ~~~~~~~l~s~ 243 (479)
|.|++++|.--
T Consensus 496 FD~d~ryLYfL 506 (668)
T COG4946 496 FDPDGRYLYFL 506 (668)
T ss_pred cCCCCcEEEEE
Confidence 77777776543
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=99.29 E-value=6.2e-10 Score=96.62 Aligned_cols=238 Identities=14% Similarity=0.209 Sum_probs=172.1
Q ss_pred CccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCC--CeEEEeEEE
Q psy14815 53 PVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS--GQFECNATL 130 (479)
Q Consensus 53 ~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~--~~~~~~~~~ 130 (479)
+....+.+++.|.++++|--.+.+.-+... ......+++++.+.++...|+.|-..|++.-+.+.. .+....+..
T Consensus 34 ~~e~gv~~~s~drtvrv~lkrds~q~wpsI---~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~ 110 (404)
T KOG1409|consen 34 PKEEGVISVSEDRTVRVWLKRDSGQYWPSI---YHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKMTFLKDY 110 (404)
T ss_pred cCCCCeEEccccceeeeEEeccccccCchh---hhhCCCCceEeeeeccceEEEEEEecceEEEEEhhhhhhhcchhhhh
Confidence 456678889999999999776544433322 234568899999999999999999999999887643 222355666
Q ss_pred eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCC
Q psy14815 131 EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK 210 (479)
Q Consensus 131 ~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~ 210 (479)
..|...+..+-|+-....+++.+.|..+.---.+.+....... +. ...+++.+.- .+...|...|.|..-.+..
T Consensus 111 ~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~-~~---~~~t~~~~d~--~~~fvGd~~gqvt~lr~~~ 184 (404)
T KOG1409|consen 111 LAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYN-FE---TPASALQFDA--LYAFVGDHSGQITMLKLEQ 184 (404)
T ss_pred hhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceE-ee---ccCCCCceee--EEEEecccccceEEEEEee
Confidence 7899999999999988999999999887644444432111111 10 1111222221 1555666677777666554
Q ss_pred cccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEE
Q psy14815 211 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS 290 (479)
Q Consensus 211 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 290 (479)
... ..+..+.+|.+.+++++|.+....|++|..|..+.+||+--.. .....+.+| ...|..+.
T Consensus 185 ~~~--~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~--------------g~~~el~gh-~~kV~~l~ 247 (404)
T KOG1409|consen 185 NGC--QLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRK--------------GTAYELQGH-NDKVQALS 247 (404)
T ss_pred cCC--ceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCc--------------ceeeeeccc-hhhhhhhh
Confidence 333 4678899999999999999999999999999999999984322 223456665 66788888
Q ss_pred ecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 291 WCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 291 ~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
..+.-+.+.+++.||.|.+|+++...
T Consensus 248 ~~~~t~~l~S~~edg~i~~w~mn~~r 273 (404)
T KOG1409|consen 248 YAQHTRQLISCGEDGGIVVWNMNVKR 273 (404)
T ss_pred hhhhheeeeeccCCCeEEEEecccee
Confidence 88888899999999999999998754
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=99.29 E-value=7.4e-10 Score=104.91 Aligned_cols=251 Identities=19% Similarity=0.303 Sum_probs=177.7
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
-++|.||++.|.-+.|+...+.|-|+..+|.|.+|-+-.|.....+..
T Consensus 64 NQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiN-------------------------------- 111 (1189)
T KOG2041|consen 64 NQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMIN-------------------------------- 111 (1189)
T ss_pred hhhhccCcceEEEEEeccccccccccCCCceEEEEeeecccHHHHHhh--------------------------------
Confidence 478999999999999999999999999999999998877766554421
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
....+-|.+++|+.+|..++..-.||.|.+=.+..++ ..-..+++ .....+.|++|.+.++.+-.+|.+.+||.
T Consensus 112 ---nRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNR-IwgKeLkg--~~l~hv~ws~D~~~~Lf~~ange~hlydn 185 (1189)
T KOG2041|consen 112 ---NRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNR-IWGKELKG--QLLAHVLWSEDLEQALFKKANGETHLYDN 185 (1189)
T ss_pred ---CcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccce-ecchhcch--heccceeecccHHHHHhhhcCCcEEEecc
Confidence 2356788999999999999999999999888776653 12223332 23457889999998888889999999998
Q ss_pred CCCCce----ee----eeeeeccccceeEEEEe--------cCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCcc
Q psy14815 164 GEEDEY----EC----AAVINAHIQDVKKVRFH--------PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST 227 (479)
Q Consensus 164 ~~~~~~----~~----~~~~~~~~~~v~~l~~~--------~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 227 (479)
...-.. .+ ...+......+..+.|. |+...|+.+..+|.+.+..-.+... ++.. ...-.
T Consensus 186 qgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~---Pvv~--dtgm~ 260 (1189)
T KOG2041|consen 186 QGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPE---PVVV--DTGMK 260 (1189)
T ss_pred cccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCCCC---CeEE--ecccE
Confidence 754211 11 11122222335566663 4678899999999998875543321 2221 12256
Q ss_pred EEEEEEccCCCEEEEeeCCC---------eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeE
Q psy14815 228 VWSLAFDRIGSRLATCSDDA---------TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI 298 (479)
Q Consensus 228 v~~~~~~~~~~~l~s~~~dg---------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l 298 (479)
+....|+++|..|+.++.+. .|.+|. .-+..+.+++.. +..|++++|-..|-.+
T Consensus 261 ~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fys----------------p~G~i~gtlkvp-g~~It~lsWEg~gLri 323 (1189)
T KOG2041|consen 261 IVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYS----------------PYGHIVGTLKVP-GSCITGLSWEGTGLRI 323 (1189)
T ss_pred eecceecCCCcEEEEccCcccccCccccceEEEec----------------cchhheEEEecC-CceeeeeEEcCCceEE
Confidence 78899999999999988653 344443 123445666665 7889999998777666
Q ss_pred EEEeCCCeEEEcccCCC
Q psy14815 299 ATACGDDAIRIFKENPE 315 (479)
Q Consensus 299 ~~~~~dg~i~vw~~~~~ 315 (479)
+.+ .|+.|++=+++..
T Consensus 324 A~A-vdsfiyfanIRP~ 339 (1189)
T KOG2041|consen 324 AIA-VDSFIYFANIRPE 339 (1189)
T ss_pred EEE-ecceEEEEeeccc
Confidence 655 3677777666543
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.6e-09 Score=110.88 Aligned_cols=297 Identities=14% Similarity=0.194 Sum_probs=173.4
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCc---cceEEEeecCCcEEEecCCCCCC--------ce
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPV---ETSLRQLVEDKNIRLWGKESFGN--------KF 79 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~w~~~~~~~--------~~ 79 (479)
..+|.|++||||+.+|+..+.++++.+-+ .+.+++......+. ....++++...+=.-+.-+.+.. ..
T Consensus 120 d~GI~a~~WSPD~Ella~vT~~~~l~~mt-~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~ 198 (928)
T PF04762_consen 120 DSGILAASWSPDEELLALVTGEGNLLLMT-RDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTV 198 (928)
T ss_pred cCcEEEEEECCCcCEEEEEeCCCEEEEEe-ccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCC
Confidence 57899999999999999999898888774 33333333322211 12222222111110000000000 00
Q ss_pred e-eeEEeccccCCcEEEEEECCCCCEEEEEEC---C---CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy14815 80 T-AKAILSDGHQRTIRETAWSPCGNFIASASF---D---ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 152 (479)
Q Consensus 80 ~-~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~---d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~ 152 (479)
. ....... ..+.-..++|-.||.++|+.+. . ..++||+-+ |.. ....+.-.+--.+++|.|.|+++++.
T Consensus 199 ~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L--~stSE~v~gLe~~l~WrPsG~lIA~~ 274 (928)
T PF04762_consen 199 PKVDEGKLS-WDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GEL--QSTSEPVDGLEGALSWRPSGNLIASS 274 (928)
T ss_pred CccccCccc-cCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceE--EeccccCCCccCCccCCCCCCEEEEE
Confidence 0 0000112 4556778999999999999875 2 589999865 542 22222233344588999999999988
Q ss_pred eC---CCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCC-CccE
Q psy14815 153 SR---DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSH-TSTV 228 (479)
Q Consensus 153 ~~---dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-~~~v 228 (479)
.. ...|.+|.-+..+.-+....+......|..+.|++++..|+.-..|. |.+|-..+. .|.....+... ...+
T Consensus 275 q~~~~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NY--HWYLKqei~~~~~~~~ 351 (928)
T PF04762_consen 275 QRLPDRHDVVFFERNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNY--HWYLKQEIRFSSSESV 351 (928)
T ss_pred EEcCCCcEEEEEecCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCC--EEEEEEEEEccCCCCC
Confidence 65 34577777665433232222334556799999999999999987665 999988754 33444444422 2334
Q ss_pred EEEEEccCC-CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCC-------------------CceEEEEEEeccccccEEE
Q psy14815 229 WSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDND-------------------SVWKCVCTLSGHHGRTIYD 288 (479)
Q Consensus 229 ~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~i~~ 288 (479)
..+.|+|.. ..|...+.+|.+..++............+... ....++....-....+|.+
T Consensus 352 ~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~ 431 (928)
T PF04762_consen 352 NFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVND 431 (928)
T ss_pred CceEECCCCCCEEEEEecCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEE
Confidence 559999854 44666666677765543221110000000000 0001111111123568999
Q ss_pred EEecCCCCeEEEEeCCCeEEEcccCCC
Q psy14815 289 ISWCHLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 289 l~~~~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
++|++++..+++-..||.|.+|.....
T Consensus 432 vaf~~~~~~~avl~~d~~l~~~~~~~~ 458 (928)
T PF04762_consen 432 VAFSPSNSRFAVLTSDGSLSIYEWDLK 458 (928)
T ss_pred EEEeCCCCeEEEEECCCCEEEEEecCC
Confidence 999999988999999999999986554
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.4e-11 Score=101.63 Aligned_cols=263 Identities=16% Similarity=0.230 Sum_probs=167.8
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEeccccc-ccc----cccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIRE-PYE----KLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~-~~~----~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
.+.|+++.|...|.||+||...|+|.+|.-+... +.. .++++... .-...
T Consensus 26 ad~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~E-------------------------FDYLk 80 (460)
T COG5170 26 ADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELE-------------------------FDYLK 80 (460)
T ss_pred cceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccc-------------------------hhhhh
Confidence 4679999999999999999999999999644322 111 12211100 00000
Q ss_pred ccccCCcEEEEEECCCC--CEEEEEECCCeEEEEECCCCeEE-------------------------------------E
Q psy14815 86 SDGHQRTIRETAWSPCG--NFIASASFDATTAVWDKRSGQFE-------------------------------------C 126 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~--~~l~t~~~dg~i~iwd~~~~~~~-------------------------------------~ 126 (479)
...-...|..+.|..++ ..++..+.|.+|++|.+...... .
T Consensus 81 SleieEKin~I~w~~~t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iia 160 (460)
T COG5170 81 SLEIEEKINAIEWFDDTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIA 160 (460)
T ss_pred hccHHHHhhheeeecCCCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEE
Confidence 01224578888998754 45666777899999987543100 0
Q ss_pred ---eEEE-eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccc-----cceeEEEEecCC-CEEEE
Q psy14815 127 ---NATL-EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI-----QDVKKVRFHPFD-NILAS 196 (479)
Q Consensus 127 ---~~~~-~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~-----~~v~~l~~~~~~-~~l~~ 196 (479)
.+.. ..|..-+.+++|+.|...++++ .|-.|.+|++.-....-.+..++.|. .-|++..|+|.. +.+.-
T Consensus 161 a~p~rvyaNaH~yhiNSiS~NsD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmY 239 (460)
T COG5170 161 AKPCRVYANAHPYHINSISFNSDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMY 239 (460)
T ss_pred eccceeccccceeEeeeeeecCchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEE
Confidence 0001 3466678899999888877776 56789999987543222233333332 347889999954 56677
Q ss_pred EEcCCcEEEEecCCcccceE------------eeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCC
Q psy14815 197 ASYDDTVKLFKEDKAEADWI------------NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIP 264 (479)
Q Consensus 197 ~~~dg~i~i~d~~~~~~~~~------------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 264 (479)
.+..|.|++-|+++...-.. ...-+..-.+.|..+.|+++|+++++-+ --+|++||.+....+
T Consensus 240 SsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRd-yltvkiwDvnm~k~p---- 314 (460)
T COG5170 240 SSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRD-YLTVKIWDVNMAKNP---- 314 (460)
T ss_pred ecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEec-cceEEEEecccccCC----
Confidence 78899999999985331000 0011122335688999999999998765 468999999766543
Q ss_pred CCCCCCceEEEEEEecc-----------ccccE---EEEEecCCCCeEEEEeCCCeEEEcccCC
Q psy14815 265 TPDNDSVWKCVCTLSGH-----------HGRTI---YDISWCHLTDLIATACGDDAIRIFKENP 314 (479)
Q Consensus 265 ~~~~~~~~~~~~~~~~~-----------~~~~i---~~l~~~~~~~~l~~~~~dg~i~vw~~~~ 314 (479)
+.++..| ....| ..+.|+-|.+.+++|+..+..-+|-..+
T Consensus 315 ----------ikTi~~h~~l~~~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~NNfgiyp~~s 368 (460)
T COG5170 315 ----------IKTIPMHCDLMDELNDVYENDAIFDKFEISFSGDDKHVLSGSYSNNFGIYPTDS 368 (460)
T ss_pred ----------ceeechHHHHHHHHHhhhhccceeeeEEEEecCCcccccccccccceeeecccc
Confidence 2333222 11222 3478888889999999988888886443
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.4e-09 Score=98.63 Aligned_cols=299 Identities=13% Similarity=0.205 Sum_probs=187.2
Q ss_pred cccceEEEEECCCCCeEEEeeC-----------CCcEEEEecccccccccccCC------------CccceEEEeecCCc
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGE-----------DKNIRLWVMVIREPYEKLHGL------------PVETSLRQLVEDKN 66 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~-----------dg~v~iwd~~~~~~~~~~~~~------------~~~~~~~~~~~~~~ 66 (479)
|. .|.-+.|||..+||+|-+. ...++|||+.+|.....+... +.+....+-...+.
T Consensus 249 Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~s 327 (698)
T KOG2314|consen 249 HP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGNS 327 (698)
T ss_pred CC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEeccce
Confidence 44 5888999999999999653 157999999999998887663 12223333333467
Q ss_pred EEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECC-----CeEEEEECCCCeEEEeEEEeCCCCcEEEEE
Q psy14815 67 IRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD-----ATTAVWDKRSGQFECNATLEGHENEVKSVT 141 (479)
Q Consensus 67 i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~ 141 (479)
|.+++..++... .. ..-....|....|+|.++.||.-... ..+.+-.+.+++ .+++-.-+.-.=..+.
T Consensus 328 isIyEtpsf~ll-d~----Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~--~iRt~nlfnVsDckLh 400 (698)
T KOG2314|consen 328 ISIYETPSFMLL-DK----KSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKR--EIRTKNLFNVSDCKLH 400 (698)
T ss_pred EEEEecCceeee-cc----cccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccc--eeeeccceeeeccEEE
Confidence 778776532110 00 11234688999999998888865432 356677776665 2333222222223566
Q ss_pred EcCCCCEEEEEe----------CCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc---CCcEEEEec
Q psy14815 142 WSKNGQFLATCS----------RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY---DDTVKLFKE 208 (479)
Q Consensus 142 ~~~~~~~l~~~~----------~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~---dg~i~i~d~ 208 (479)
|-.+|.+|+.-- .-..+.|+.++..... +. ...-...|-..+|.|.|+.+++-+. ..++.+|.+
T Consensus 401 WQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIp--ve-~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~ 477 (698)
T KOG2314|consen 401 WQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIP--VE-VVELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAV 477 (698)
T ss_pred eccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCC--ce-eeecchheeeeeeccCCCeEEEEEccccccceeEEEe
Confidence 777787776532 2224667777665321 11 1223466888999999988776553 356899988
Q ss_pred CCcccceEeeeeecCCCccEEEEEEccCCCEEEEee---CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccccc
Q psy14815 209 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS---DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRT 285 (479)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (479)
.+....+..+..+.. ...+.+.|+|.|++++.+. ..|.+.++|+...... .........
T Consensus 478 e~~~~~~~lVk~~dk--~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k----------------~~~~~eh~~ 539 (698)
T KOG2314|consen 478 ETNIKKPSLVKELDK--KFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLK----------------DTASPEHFA 539 (698)
T ss_pred ecCCCchhhhhhhcc--cccceEEEcCCCcEEEEEEecccccceEEEecchhhhh----------------hccCccccc
Confidence 854444455555543 4567899999999987754 5788999998532110 001111235
Q ss_pred EEEEEecCCCCeEEEEeC------CCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 286 IYDISWCHLTDLIATACG------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 286 i~~l~~~~~~~~l~~~~~------dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
.+.+.|.|.|+|+++++. |..-++|+++... +... --..--.+.|-|.-+.+
T Consensus 540 at~veWDPtGRYvvT~ss~wrhk~d~GYri~tfqGrl----------l~~~---~i~~f~qF~WRPRPps~ 597 (698)
T KOG2314|consen 540 ATEVEWDPTGRYVVTSSSSWRHKVDNGYRIFTFQGRL----------LKED---IIDRFKQFLWRPRPPSL 597 (698)
T ss_pred cccceECCCCCEEEEeeehhhhccccceEEEEeecHH----------HHHH---HHHHHHhhccCCCCCcc
Confidence 678899999999999876 4455677766543 2111 12334467888887766
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=99.25 E-value=5e-09 Score=96.88 Aligned_cols=295 Identities=13% Similarity=0.118 Sum_probs=178.1
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEeccccccccccc--------CCCccceEEEee----------cCCcEEEecC
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLH--------GLPVETSLRQLV----------EDKNIRLWGK 72 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~--------~~~~~~~~~~~~----------~~~~i~~w~~ 72 (479)
..+.+..++|++|+++|.+. +..++|++..++..+.... ..+.+..+.+.- ....+.+|+.
T Consensus 34 ~~~~~v~~~S~~G~lfA~~~-~~~v~i~~~~~~~~~lt~~~~~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~v 112 (566)
T KOG2315|consen 34 SRPCNVFAYSNNGRLFAYSD-NQVVKVFEIATLKVVLCVELKKTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLVYNV 112 (566)
T ss_pred CCcceeEEEcCCCcEEEEEc-CCeEEEEEccCCcEEEEeccceeeeeeecccccccccccccccccCCCCCCCceeeeee
Confidence 34467788999999888775 5579999987774322211 112222222211 1234678877
Q ss_pred CCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCC--EEE
Q psy14815 73 ESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ--FLA 150 (479)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~--~l~ 150 (479)
+......... ...... ++..|++|..+.+--. .+.+.+|++.+-+ ..... -|...++.+.++|.+. .++
T Consensus 113 et~~~~s~~q----~k~Q~~-W~~qfs~dEsl~arlv-~nev~f~~~~~f~-~~~~k--l~~~~i~~f~lSpgp~~~~vA 183 (566)
T KOG2315|consen 113 ETGVQRSQIQ----KKMQNG-WVPQFSIDESLAARLV-SNEVQFYDLGSFK-TIQHK--LSVSGITMLSLSPGPEPPFVA 183 (566)
T ss_pred ccceehhhee----hhhhcC-cccccccchhhhhhhh-cceEEEEecCCcc-ceeee--eeccceeeEEecCCCCCceEE
Confidence 7411111111 112222 6888998875544333 4689999987743 12223 3567889999998633 444
Q ss_pred E-----EeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCC-EEEEEE--cC---------CcEEEEecCCccc
Q psy14815 151 T-----CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASAS--YD---------DTVKLFKEDKAEA 213 (479)
Q Consensus 151 ~-----~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~--~d---------g~i~i~d~~~~~~ 213 (479)
+ .+.-+.|++|..........+..-.-....--.+.|++-|. +|+.++ -| .++++++++...
T Consensus 184 vyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s- 262 (566)
T KOG2315|consen 184 VYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGES- 262 (566)
T ss_pred EEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCce-
Confidence 3 23345799998873322122211111122234577887664 333332 22 357777777222
Q ss_pred ceEeeeeecCCCccEEEEEEccCCCEEEE--eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEe
Q psy14815 214 DWINFATLKSHTSTVWSLAFDRIGSRLAT--CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW 291 (479)
Q Consensus 214 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s--~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 291 (479)
....+ ...++|.++.|+|+++.+++ |-+-..+.|||++- .++..+. .++-+++-|
T Consensus 263 ---~~V~L-~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~----------------~~v~df~---egpRN~~~f 319 (566)
T KOG2315|consen 263 ---VSVPL-LKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRG----------------KPVFDFP---EGPRNTAFF 319 (566)
T ss_pred ---EEEec-CCCCCceEEEECCCCCEEEEEEecccceEEEEcCCC----------------CEeEeCC---CCCccceEE
Confidence 22222 24789999999999988765 44667899999732 2233332 557889999
Q ss_pred cCCCCeEEEEeCC---CeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCC
Q psy14815 292 CHLTDLIATACGD---DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 292 ~~~~~~l~~~~~d---g~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 351 (479)
+|.|++|+.++.+ |.|.|||+...+ ++..+ ....-+-+.|+|||+++.
T Consensus 320 np~g~ii~lAGFGNL~G~mEvwDv~n~K---------~i~~~---~a~~tt~~eW~PdGe~fl 370 (566)
T KOG2315|consen 320 NPHGNIILLAGFGNLPGDMEVWDVPNRK---------LIAKF---KAANTTVFEWSPDGEYFL 370 (566)
T ss_pred CCCCCEEEEeecCCCCCceEEEeccchh---------hcccc---ccCCceEEEEcCCCcEEE
Confidence 9999999988775 899999999876 33333 223456689999999983
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=99.25 E-value=4.1e-11 Score=109.99 Aligned_cols=215 Identities=15% Similarity=0.205 Sum_probs=145.3
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
.+..+.||+..|..++--.+.+.+++++.|++|++|.+...... ......
T Consensus 727 rL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~------------------------------~~tsaC 776 (1034)
T KOG4190|consen 727 RLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDE------------------------------IGTSAC 776 (1034)
T ss_pred eeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCc------------------------------ccccee
Confidence 35677899999999888777888999999999999987542210 011223
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC--CCCEEEEE-eCCCcEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK--NGQFLATC-SRDKSVW 159 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~~~-~~dg~i~ 159 (479)
......|+.+|.++.|-.+.++++++ ||.|.+||.--++......-....+.+..+..-+ +...++.| +...+|+
T Consensus 777 QfTY~aHkk~i~~igfL~~lr~i~Sc--D~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVK 854 (1034)
T KOG4190|consen 777 QFTYQAHKKPIHDIGFLADLRSIASC--DGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVK 854 (1034)
T ss_pred eeEhhhccCcccceeeeeccceeeec--cCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhhe
Confidence 33457899999999999988888776 6889999987665221111111122233333333 34444444 6788999
Q ss_pred EEEeCCCCceeeeeee--eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC
Q psy14815 160 VWEVGEEDEYECAAVI--NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG 237 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~--~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 237 (479)
++|.+..+-....+.. .+...-+++++..+.|+.++.+-.+|.|.+.|.++++. +..++...-....++ .|..
T Consensus 855 l~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~v----INswrpmecdllqla-apsd 929 (1034)
T KOG4190|consen 855 LFDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKV----INSWRPMECDLLQLA-APSD 929 (1034)
T ss_pred eeecccccceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCce----eccCCcccchhhhhc-Cchh
Confidence 9999987432222222 23345689999999999999999999999999998874 444444443333333 3556
Q ss_pred CEEEEeeCCCeEEE-Eec
Q psy14815 238 SRLATCSDDATVKI-WKE 254 (479)
Q Consensus 238 ~~l~s~~~dg~i~i-wd~ 254 (479)
+.++....|.++.+ |-.
T Consensus 930 q~L~~saldHslaVnWha 947 (1034)
T KOG4190|consen 930 QALAQSALDHSLAVNWHA 947 (1034)
T ss_pred HHHHhhcccceeEeeehh
Confidence 67777777888888 864
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.24 E-value=7.4e-09 Score=94.66 Aligned_cols=294 Identities=15% Similarity=0.144 Sum_probs=184.3
Q ss_pred cccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC--------CCccceEEEee---------------cCCc
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG--------LPVETSLRQLV---------------EDKN 66 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~--------~~~~~~~~~~~---------------~~~~ 66 (479)
-.-++..++|||.|++|++....| |.+|.-+....+..+.. .|.+..+.+.. .++.
T Consensus 31 ~~~p~~~~~~SP~G~~l~~~~~~~-V~~~~g~~~~~l~~~~~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~ 109 (561)
T COG5354 31 ENWPVAYVSESPLGTYLFSEHAAG-VECWGGPSKAKLVRFRHPDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNN 109 (561)
T ss_pred cCcchhheeecCcchheehhhccc-eEEccccchhheeeeecCCceecccCcccceeeeeccCCccChhhccCCccccCc
Confidence 456788999999999999887665 89998766554443322 24445555443 3346
Q ss_pred EEEecCCCCCCceeeeEEeccccCCc--EE-EEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCC-CCcEEEEEE
Q psy14815 67 IRLWGKESFGNKFTAKAILSDGHQRT--IR-ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGH-ENEVKSVTW 142 (479)
Q Consensus 67 i~~w~~~~~~~~~~~~~~~~~~~~~~--v~-~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~v~~l~~ 142 (479)
+.+||..+..-.... .....+ .+ -+.|+-+..++|-.. ...+.|+++ ++... ...+..- ...+....|
T Consensus 110 ~~vwd~~sg~iv~sf-----~~~~q~~~~Wp~~k~s~~D~y~ARvv-~~sl~i~e~-t~n~~-~~p~~~lr~~gi~dFsi 181 (561)
T COG5354 110 VFVWDIASGMIVFSF-----NGISQPYLGWPVLKFSIDDKYVARVV-GSSLYIHEI-TDNIE-EHPFKNLRPVGILDFSI 181 (561)
T ss_pred eeEEeccCceeEeec-----cccCCcccccceeeeeecchhhhhhc-cCeEEEEec-CCccc-cCchhhccccceeeEEe
Confidence 899988742211111 111222 33 677888887776663 357999997 44322 1111111 256788888
Q ss_pred cCCC--CEEEE-----EeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEE-----------cCCcEE
Q psy14815 143 SKNG--QFLAT-----CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-----------YDDTVK 204 (479)
Q Consensus 143 ~~~~--~~l~~-----~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-----------~dg~i~ 204 (479)
+|.+ ..|+. ....+++++|.+...........+ ...-..+.|++.|++|++-- ....+.
T Consensus 182 sP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lf---k~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLy 258 (561)
T COG5354 182 SPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLF---KVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLY 258 (561)
T ss_pred cCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeE---eecccEEEEecCCceEEEEEEEeeecccceeccceEE
Confidence 8853 34443 345778999999865332222222 22234688999888766432 134578
Q ss_pred EEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee--CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccc
Q psy14815 205 LFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS--DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH 282 (479)
Q Consensus 205 i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (479)
+++++... +.......++|...+|.|.++.+++++ .+..+.++|++.. ..+...
T Consensus 259 l~~~~e~~-----i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N------------------l~~~~P- 314 (561)
T COG5354 259 LLRITERS-----IPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN------------------LRFYFP- 314 (561)
T ss_pred EEeecccc-----cceeccccccceeeeecccCCceeEEecccccceeecccccc------------------eEEecC-
Confidence 88887433 222225578999999999998876654 6788899987432 111111
Q ss_pred cccEEEEEecCCCCeEEEEeCC---CeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 283 GRTIYDISWCHLTDLIATACGD---DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 283 ~~~i~~l~~~~~~~~l~~~~~d---g~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
...=+.+.|+|.+++++.++-| |.+.+|+...+. .+...+. ....+-+.||||++++
T Consensus 315 e~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf---------~~~~~~~--~~n~s~~~wspd~qF~ 374 (561)
T COG5354 315 EQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRF---------KVAGAFN--GLNTSYCDWSPDGQFY 374 (561)
T ss_pred CcccccccccCcccEEEEecCCccccceEEeccCCce---------EEEEEee--cCCceEeeccCCceEE
Confidence 3345567899999999998776 789999988764 2221211 2234557899999987
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=99.23 E-value=9.4e-09 Score=86.42 Aligned_cols=235 Identities=11% Similarity=0.044 Sum_probs=153.9
Q ss_pred EEEEECC-----CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEEeCCCC
Q psy14815 94 RETAWSP-----CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEED 167 (479)
Q Consensus 94 ~~v~~~~-----~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vwd~~~~~ 167 (479)
..+.|-| ...+|+.|+..|...+|...+.+. .......|...|+-+.=.- ....+..++.|.++++.++..+.
T Consensus 71 ~g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~-h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s 149 (344)
T KOG4532|consen 71 TGMTFTPGSFINKCVTLADGGASGQFDLFACNTNDG-HLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDS 149 (344)
T ss_pred ecccccchHhhccccEEEeccccceeeeecccCccc-ceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCc
Confidence 3455555 346899999999999999987652 3344444554433221111 12347778888999999887653
Q ss_pred ceeeeeeeeccc--cceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeC
Q psy14815 168 EYECAAVINAHI--QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 245 (479)
Q Consensus 168 ~~~~~~~~~~~~--~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 245 (479)
... ..|. -.+.+++++++++++++.+....|..|.+......... ......+..-.+..|+.....+|++..
T Consensus 150 ~~~-----~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~-~~~a~t~D~gF~~S~s~~~~~FAv~~Q 223 (344)
T KOG4532|consen 150 NKF-----AVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIEN-IYEAPTSDHGFYNSFSENDLQFAVVFQ 223 (344)
T ss_pred ccc-----eeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeee-eEecccCCCceeeeeccCcceEEEEec
Confidence 211 1222 23788999999999999999999999999865532111 123333444567889999999999999
Q ss_pred CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC--eEEEEeCCCeEEEcccCCCCCCCCcee
Q psy14815 246 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD--LIATACGDDAIRIFKENPEAGDSDMVS 323 (479)
Q Consensus 246 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~ 323 (479)
||++.|||++....+... ...-+.||.+.+..+.|++-|. +|+..-.-+.+.+-|++....-
T Consensus 224 dg~~~I~DVR~~~tpm~~-----------~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~----- 287 (344)
T KOG4532|consen 224 DGTCAIYDVRNMATPMAE-----------ISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNH----- 287 (344)
T ss_pred CCcEEEEEecccccchhh-----------hcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCcee-----
Confidence 999999999876554321 2233445688999999998654 4555555678999999887611
Q ss_pred eEEEecc---ccccc-cceeEEEecCCCCCCCc
Q psy14815 324 FDLVHTE---HRAHN-QDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 324 ~~~~~~~---~~~h~-~~v~~~~~sp~~~~l~~ 352 (479)
+.+... ...|. ..|..-.|+.++.....
T Consensus 288 -q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v 319 (344)
T KOG4532|consen 288 -QVIVIPDDVERKHNTQHIFGTNFNNENESNDV 319 (344)
T ss_pred -eEEecCccccccccccccccccccCCCccccc
Confidence 111111 11232 34667777777665533
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.9e-10 Score=94.85 Aligned_cols=204 Identities=15% Similarity=0.201 Sum_probs=121.3
Q ss_pred CCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-----CCcEEEEEeCCCCceeeee
Q psy14815 99 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-----DKSVWVWEVGEEDEYECAA 173 (479)
Q Consensus 99 ~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-----dg~i~vwd~~~~~~~~~~~ 173 (479)
+-.++.++++..||.+.+.+.+... ............-.+.+....++.+.++.. -+..+.|+++..+...
T Consensus 98 s~~~t~V~~~~~dg~~~v~s~~~~~-~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~--- 173 (319)
T KOG4714|consen 98 TMTDNRVCIGYADGSLAVFSTDKDL-ALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLI--- 173 (319)
T ss_pred cccCCceEecCCCceEEEEechHHH-hhhhhcccccccccccceeecccEEecCCcceEeeccceeeeccccccccc---
Confidence 3346789999999999999876521 111111111111122333334554444422 2345666665442211
Q ss_pred eeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC-CCEEEEeeCCCeEEE
Q psy14815 174 VINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLATCSDDATVKI 251 (479)
Q Consensus 174 ~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~i 251 (479)
.-......|++++-+| +.+.+++|+.||.+.+||.+... .+...+..|..+++.+-|+|. +..|+++++||.+--
T Consensus 174 ~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~---~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~ 250 (319)
T KOG4714|consen 174 PSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVA---MPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWH 250 (319)
T ss_pred ccccccccchhhhCCcccccEEEEecCCCeEEEEEccccc---chHHHHHHhhhhhhheeccCCCchheeEecCCCcEEE
Confidence 1111223488999999 55788889999999999999864 356678899999999999984 578999999999999
Q ss_pred EeccCCCCC-----CC---CCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcc
Q psy14815 252 WKEYKPGNS-----AG---IPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 252 wd~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~ 311 (479)
||....... .. -...+..+..-.+..+.......|+++.. -|..|++|+.-+.|++++
T Consensus 251 wdas~~~l~i~~~~s~~s~WLsgD~v~s~i~i~~ll~~~~~SinsfDV--~g~~lVcgtd~eaIyl~~ 316 (319)
T KOG4714|consen 251 WDASTTFLSISNQASVISSWLSGDPVKSRIEITSLLPSRSLSINSFDV--LGPCLVCGTDAEAIYLTR 316 (319)
T ss_pred EcCCCceEEecCccccccccccCCcccceEeeeccccccceeeeeeec--cCceEEeccccceEEEec
Confidence 997632110 00 00111111111111111111223444333 577899999888888875
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.6e-07 Score=85.38 Aligned_cols=211 Identities=13% Similarity=0.149 Sum_probs=144.5
Q ss_pred CCCEEEEEECCCeEEEEECCCCeEEEeEE---Ee-CCC-----CcEEEEE-EcC-CCCEEEEEeCCCcEEEEEeCCCCce
Q psy14815 101 CGNFIASASFDATTAVWDKRSGQFECNAT---LE-GHE-----NEVKSVT-WSK-NGQFLATCSRDKSVWVWEVGEEDEY 169 (479)
Q Consensus 101 ~~~~l~t~~~dg~i~iwd~~~~~~~~~~~---~~-~~~-----~~v~~l~-~~~-~~~~l~~~~~dg~i~vwd~~~~~~~ 169 (479)
||+.++..- .|.|.+||..+.+.+.+.. +. ... .+..-+. |++ +|.+++..|. |...+.+...+
T Consensus 277 DGkrIvFq~-~GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR-GkaFi~~~~~~--- 351 (668)
T COG4946 277 DGKRIVFQN-AGDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR-GKAFIMRPWDG--- 351 (668)
T ss_pred CCcEEEEec-CCcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEec-CcEEEECCCCC---
Confidence 555555433 4789999988775332211 01 000 0111111 333 6788888766 67777776654
Q ss_pred eeeeeeeccccceeEEEEecCCCEEEEEEcCC-cEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCe
Q psy14815 170 ECAAVINAHIQDVKKVRFHPFDNILASASYDD-TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 248 (479)
Q Consensus 170 ~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~ 248 (479)
..+ ..++...|+-..+..+++-++.|..|| .+-+||.++++ +..+...-+.|.++..+++|++++.+.....
T Consensus 352 ~~i--qv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e-----~kr~e~~lg~I~av~vs~dGK~~vvaNdr~e 424 (668)
T COG4946 352 YSI--QVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGE-----VKRIEKDLGNIEAVKVSPDGKKVVVANDRFE 424 (668)
T ss_pred eeE--EcCCCCceEEEEEccCCcceEEeccCCceEEEEecCCce-----EEEeeCCccceEEEEEcCCCcEEEEEcCceE
Confidence 222 235667788888888888899999999 89999999876 3556667788999999999999999988888
Q ss_pred EEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCC----eEEEcccCCCCCCCCceee
Q psy14815 249 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD----AIRIFKENPEAGDSDMVSF 324 (479)
Q Consensus 249 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg----~i~vw~~~~~~~~~~~~~~ 324 (479)
+.+.|+.++.. +.+......-|+.+.|+|+++++|-+--+| .|++||+..++
T Consensus 425 l~vididngnv----------------~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~K-------- 480 (668)
T COG4946 425 LWVIDIDNGNV----------------RLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGK-------- 480 (668)
T ss_pred EEEEEecCCCe----------------eEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCe--------
Confidence 88889865532 223333366899999999999999886664 69999999987
Q ss_pred EEEeccccccccceeEEEecCCCCCC
Q psy14815 325 DLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 325 ~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
..... ...+.=.+-+|.||+++|
T Consensus 481 --iy~vT-T~ta~DfsPaFD~d~ryL 503 (668)
T COG4946 481 --IYDVT-TPTAYDFSPAFDPDGRYL 503 (668)
T ss_pred --EEEec-CCcccccCcccCCCCcEE
Confidence 32221 122223456788999887
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=99.18 E-value=9.4e-08 Score=87.57 Aligned_cols=222 Identities=9% Similarity=-0.010 Sum_probs=128.8
Q ss_pred ECCCCCEEEEEEC----------CCeEEEEECCCCeEEEeEEEeCC-------CCcEEEEEEcCCCCEEEEEe-C-CCcE
Q psy14815 98 WSPCGNFIASASF----------DATTAVWDKRSGQFECNATLEGH-------ENEVKSVTWSKNGQFLATCS-R-DKSV 158 (479)
Q Consensus 98 ~~~~~~~l~t~~~----------dg~i~iwd~~~~~~~~~~~~~~~-------~~~v~~l~~~~~~~~l~~~~-~-dg~i 158 (479)
++||++.++++.. +..|.+||..+.+. +..+..- ......++++|||+++++.. . +..|
T Consensus 53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~--~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V 130 (352)
T TIGR02658 53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLP--IADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAV 130 (352)
T ss_pred ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcE--EeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEE
Confidence 8999998887765 68999999999974 3444321 12334789999999999876 3 6899
Q ss_pred EEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeee-ecC-----CCccEEEEE
Q psy14815 159 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT-LKS-----HTSTVWSLA 232 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~-----~~~~v~~~~ 232 (479)
.+.|+.+.+.. ..+.- .....-...+++... +-+.||......+............ +.. ...+ .
T Consensus 131 ~VvD~~~~kvv---~ei~v-p~~~~vy~t~e~~~~--~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP----~ 200 (352)
T TIGR02658 131 GVVDLEGKAFV---RMMDV-PDCYHIFPTANDTFF--MHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHP----A 200 (352)
T ss_pred EEEECCCCcEE---EEEeC-CCCcEEEEecCCccE--EEeecCceEEEEecCCCceEEeeeeeecCCccccccCC----c
Confidence 99999998433 32222 111111222222221 2234454444333322210000001 111 0112 3
Q ss_pred Ecc-CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEe------ccccccEEEEEecCCCCeEEEEe---
Q psy14815 233 FDR-IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS------GHHGRTIYDISWCHLTDLIATAC--- 302 (479)
Q Consensus 233 ~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~l~~~~~~~~l~~~~--- 302 (479)
|.+ +|++++.... |+|.+.|+........ .....+. +-....+.-++++++++.+.+..
T Consensus 201 ~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~----------~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~ 269 (352)
T TIGR02658 201 YSNKSGRLVWPTYT-GKIFQIDLSSGDAKFL----------PAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQR 269 (352)
T ss_pred eEcCCCcEEEEecC-CeEEEEecCCCcceec----------ceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCC
Confidence 455 7888877766 9999999644322111 1111111 11123344499999999887743
Q ss_pred -------CCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCC-CCCcc
Q psy14815 303 -------GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP-EPQKT 353 (479)
Q Consensus 303 -------~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~-~l~~~ 353 (479)
..+.|.++|..+++ .+..+..+ ..+..+++|||++ .|...
T Consensus 270 ~~~thk~~~~~V~ViD~~t~k---------vi~~i~vG--~~~~~iavS~Dgkp~lyvt 317 (352)
T TIGR02658 270 AKWTHKTASRFLFVVDAKTGK---------RLRKIELG--HEIDSINVSQDAKPLLYAL 317 (352)
T ss_pred ccccccCCCCEEEEEECCCCe---------EEEEEeCC--CceeeEEECCCCCeEEEEe
Confidence 12579999999887 45555433 4789999999999 66433
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=99.16 E-value=8.9e-09 Score=86.57 Aligned_cols=201 Identities=13% Similarity=0.078 Sum_probs=132.2
Q ss_pred EEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeecccccee
Q psy14815 104 FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVK 183 (479)
Q Consensus 104 ~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~ 183 (479)
.+..++.|.++++.+++.+......... .-.+.++.+++|++++++.+....|..|.+..................-.
T Consensus 130 ~~~i~sndht~k~~~~~~~s~~~~~h~~--~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF 207 (344)
T KOG4532|consen 130 PLNIASNDHTGKTMVVSGDSNKFAVHNQ--NLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGF 207 (344)
T ss_pred ceeeccCCcceeEEEEecCcccceeecc--ccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCce
Confidence 4566777888888887765321111111 12378999999999999999999999999987654322222333334456
Q ss_pred EEEEecCCCEEEEEEcCCcEEEEecCCcccceEe-eeeecCCCccEEEEEEccCCC--EEEEeeCCCeEEEEeccCCCCC
Q psy14815 184 KVRFHPFDNILASASYDDTVKLFKEDKAEADWIN-FATLKSHTSTVWSLAFDRIGS--RLATCSDDATVKIWKEYKPGNS 260 (479)
Q Consensus 184 ~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~ 260 (479)
+..|+.....+|++..||++.|||++........ ..+...|.+.+..+.|++.|. +|+..-.-+.+.+-|++....-
T Consensus 208 ~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~ 287 (344)
T KOG4532|consen 208 YNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNH 287 (344)
T ss_pred eeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCcee
Confidence 7889999999999999999999999975532211 223345889999999998663 4444444578999999877654
Q ss_pred CCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCC
Q psy14815 261 AGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
..+..++. ....|....|..-.|+.++.-+.+.+++ .+.=|++.++
T Consensus 288 q~I~i~~d--------~~~~~~tq~ifgt~f~~~n~s~~v~~e~-~~ae~ni~sr 333 (344)
T KOG4532|consen 288 QVIVIPDD--------VERKHNTQHIFGTNFNNENESNDVKNEL-QGAEYNILSR 333 (344)
T ss_pred eEEecCcc--------ccccccccccccccccCCCcccccccch-hhheeecccc
Confidence 33322211 1223334457777788777766666554 3445555544
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.1e-08 Score=95.11 Aligned_cols=213 Identities=13% Similarity=0.141 Sum_probs=144.9
Q ss_pred CcccccccccccceEEEEECCCC------------CeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEE
Q psy14815 1 MINSQTLKGHQGRVWNVSWNPQG------------TMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIR 68 (479)
Q Consensus 1 ~~~~~~l~~h~~~V~~l~~s~~~------------~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 68 (479)
++.++++..|...|+.+.|.|.. -+||++...|.|.+||...+..+..+
T Consensus 45 ~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l------------------- 105 (1062)
T KOG1912|consen 45 LQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWL------------------- 105 (1062)
T ss_pred hhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhh-------------------
Confidence 35678889999999999998721 25677778899999998776655544
Q ss_pred EecCCCCCCceeeeEEeccccCCcEEEEEECC---CC-CEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC
Q psy14815 69 LWGKESFGNKFTAKAILSDGHQRTIRETAWSP---CG-NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK 144 (479)
Q Consensus 69 ~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~ 144 (479)
..|.+++..++|-+ +. ..|+.-....++.+|+..+|+ .............|+.+.|
T Consensus 106 ------------------~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~--k~Wk~~ys~~iLs~f~~DP 165 (1062)
T KOG1912|consen 106 ------------------SHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGE--KFWKYDYSHEILSCFRVDP 165 (1062)
T ss_pred ------------------cCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCc--eeeccccCCcceeeeeeCC
Confidence 45778888999876 33 567777777899999999997 4445444455677899988
Q ss_pred -CCCEEEEEeCCCcEEEEEeCCCCc----eeeeeeeecccc----------------c---------eeEEEEecCCCEE
Q psy14815 145 -NGQFLATCSRDKSVWVWEVGEEDE----YECAAVINAHIQ----------------D---------VKKVRFHPFDNIL 194 (479)
Q Consensus 145 -~~~~l~~~~~dg~i~vwd~~~~~~----~~~~~~~~~~~~----------------~---------v~~l~~~~~~~~l 194 (479)
|.+.+..-+..|.+.+-+.-...+ .+.++....|.. . .-.++|+|.-+.+
T Consensus 166 fd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~ 245 (1062)
T KOG1912|consen 166 FDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNI 245 (1062)
T ss_pred CCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhce
Confidence 777777777778777766543211 111222222211 0 1135678866666
Q ss_pred EEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC--CEEEEeeCCCeEEEEeccC
Q psy14815 195 ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG--SRLATCSDDATVKIWKEYK 256 (479)
Q Consensus 195 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~s~~~dg~i~iwd~~~ 256 (479)
+.......+.++|++-.. ++....-..+.+.-+.+-|++ ..|++.-.||.+.+|-.+.
T Consensus 246 lfi~~prellv~dle~~~----~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~ 305 (1062)
T KOG1912|consen 246 LFITFPRELLVFDLEYEC----CLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKE 305 (1062)
T ss_pred EEEEeccceEEEcchhhc----eeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeec
Confidence 666778889999997433 244444444555556666654 5688888999999997544
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.13 E-value=7.5e-08 Score=102.14 Aligned_cols=222 Identities=10% Similarity=0.071 Sum_probs=134.6
Q ss_pred CcEEEEEECCCCCEEEEEE-CCCeEEEEECCCCeEEEeEEE-------eCC-------CCcEEEEEEcC-CCCEEEEEeC
Q psy14815 91 RTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQFECNATL-------EGH-------ENEVKSVTWSK-NGQFLATCSR 154 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~-------~~~-------~~~v~~l~~~~-~~~~l~~~~~ 154 (479)
.....+++.++++.|+++. ..+.|+++|..++....+..- .+. -.....++++| ++..+++.+.
T Consensus 624 ~~P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~ 703 (1057)
T PLN02919 624 NRPQGLAYNAKKNLLYVADTENHALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAG 703 (1057)
T ss_pred CCCcEEEEeCCCCEEEEEeCCCceEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECC
Confidence 4567889999888766654 457899999988753222110 000 11346899999 5556666677
Q ss_pred CCcEEEEEeCCCCceeeee-----eeec------cccceeEEEEecCCC-EEEEEEcCCcEEEEecCCcccceEe-----
Q psy14815 155 DKSVWVWEVGEEDEYECAA-----VINA------HIQDVKKVRFHPFDN-ILASASYDDTVKLFKEDKAEADWIN----- 217 (479)
Q Consensus 155 dg~i~vwd~~~~~~~~~~~-----~~~~------~~~~v~~l~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~----- 217 (479)
++.|++||..++....... ...+ .-...+.++++|+++ ++++-+.++.|++||+.++......
T Consensus 704 ~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~ 783 (1057)
T PLN02919 704 QHQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPT 783 (1057)
T ss_pred CCeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccc
Confidence 8899999987653111000 0000 112346799999987 4555566789999999865421100
Q ss_pred ----eeeecC--------CCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCC-CCCceEEEEEEeccccc
Q psy14815 218 ----FATLKS--------HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD-NDSVWKCVCTLSGHHGR 284 (479)
Q Consensus 218 ----~~~~~~--------~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 284 (479)
...+.. .-.....++++++|+.+++-+.++.|++||.............. ....+. ..... -.
T Consensus 784 ~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~---~~~a~-l~ 859 (1057)
T PLN02919 784 FSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGK---ALKAQ-LS 859 (1057)
T ss_pred cCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCc---ccccc-cC
Confidence 000000 01124588999999988888899999999975432110000000 000000 00111 23
Q ss_pred cEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 285 TIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 285 ~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
....++++++|+++++-+.++.|++||+.+++
T Consensus 860 ~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~ 891 (1057)
T PLN02919 860 EPAGLALGENGRLFVADTNNSLIRYLDLNKGE 891 (1057)
T ss_pred CceEEEEeCCCCEEEEECCCCEEEEEECCCCc
Confidence 56789999999999988899999999998875
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.4e-07 Score=79.37 Aligned_cols=195 Identities=13% Similarity=0.173 Sum_probs=116.1
Q ss_pred ccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC-------CCCcEEEEEEcCC------CCEEEEEeC
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG-------HENEVKSVTWSKN------GQFLATCSR 154 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~-------~~~~v~~l~~~~~------~~~l~~~~~ 154 (479)
...-.-..++||||+..||.+...|+|+++|+..... ..+.. -...|..+.|.+. ...|++-..
T Consensus 41 D~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~l---f~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y 117 (282)
T PF15492_consen 41 DPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSEL---FVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINY 117 (282)
T ss_pred CCCchheEEEECCCCcEEEEEcCCCeEEEEeccccee---EEcCcccccCCccccceeeeEeeccccccccceeEEEEec
Confidence 3344567899999999999999999999999986532 22221 1245677777652 225777778
Q ss_pred CCcEEEEEeCC--CCceeeeeeee---ccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEE
Q psy14815 155 DKSVWVWEVGE--EDEYECAAVIN---AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW 229 (479)
Q Consensus 155 dg~i~vwd~~~--~~~~~~~~~~~---~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~ 229 (479)
.|.++-|-+.. .+..+....+. .+...|.++.|+|..++|++|+.... +.+. -.+....++
T Consensus 118 ~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~------~~~~--------s~a~~~GLt 183 (282)
T PF15492_consen 118 RGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQN------QDGM--------SKASSCGLT 183 (282)
T ss_pred cceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCC------CCcc--------ccccccCce
Confidence 88888888743 22223333322 24668999999999888888774322 0000 001111222
Q ss_pred EEEEc---cCCCEEEEeeCCCe------EEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEE
Q psy14815 230 SLAFD---RIGSRLATCSDDAT------VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT 300 (479)
Q Consensus 230 ~~~~~---~~~~~l~s~~~dg~------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~ 300 (479)
+-..- |..+. ++...|+. -.+|.+- ..+ .....+.....|..|..||||++||+
T Consensus 184 aWRiL~~~Pyyk~-v~~~~~~~~~~~~~~~~~~~~---------------~~~-~fs~~~~~~d~i~kmSlSPdg~~La~ 246 (282)
T PF15492_consen 184 AWRILSDSPYYKQ-VTSSEDDITASSKRRGLLRIP---------------SFK-FFSRQGQEQDGIFKMSLSPDGSLLAC 246 (282)
T ss_pred EEEEcCCCCcEEE-ccccCccccccccccceeecc---------------cee-eeeccccCCCceEEEEECCCCCEEEE
Confidence 22221 11111 11222211 1222220 001 11112323678999999999999999
Q ss_pred EeCCCeEEEcccCCCC
Q psy14815 301 ACGDDAIRIFKENPEA 316 (479)
Q Consensus 301 ~~~dg~i~vw~~~~~~ 316 (479)
...+|.|.+|++.+-.
T Consensus 247 ih~sG~lsLW~iPsL~ 262 (282)
T PF15492_consen 247 IHFSGSLSLWEIPSLR 262 (282)
T ss_pred EEcCCeEEEEecCcch
Confidence 9999999999998765
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=99.05 E-value=4e-09 Score=93.65 Aligned_cols=166 Identities=14% Similarity=0.165 Sum_probs=117.4
Q ss_pred cEEEEEECCCCCEEEEEECCCeEEEEECCCCe--EEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCce
Q psy14815 92 TIRETAWSPCGNFIASASFDATTAVWDKRSGQ--FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 169 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 169 (479)
....+..+++++++|.+..+....++++.... ........ -...-+++.|..+......+..-|.++-+|+-....
T Consensus 64 a~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~-v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~- 141 (390)
T KOG3914|consen 64 APALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSC-VPKRPTAISFIREDTSVLVADKAGDVYSFDILSADS- 141 (390)
T ss_pred cccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEee-cccCcceeeeeeccceEEEEeecCCceeeeeecccc-
Confidence 44556677888999999888887777776543 12222221 223445666666666677766666666666554322
Q ss_pred eeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeE
Q psy14815 170 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 249 (479)
Q Consensus 170 ~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i 249 (479)
.+....-+|-+.++.++++||+++++++..|..|++-....... .-.-.-+|..-|..++.-+ +..|+++|.|++|
T Consensus 142 ~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~---IesfclGH~eFVS~isl~~-~~~LlS~sGD~tl 217 (390)
T KOG3914|consen 142 GRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFV---IESFCLGHKEFVSTISLTD-NYLLLSGSGDKTL 217 (390)
T ss_pred cCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccc---hhhhccccHhheeeeeecc-CceeeecCCCCcE
Confidence 23345668999999999999999999999999999987764332 1122357999999999876 4568999999999
Q ss_pred EEEeccCCCCCCCC
Q psy14815 250 KIWKEYKPGNSAGI 263 (479)
Q Consensus 250 ~iwd~~~~~~~~~~ 263 (479)
++||+..+.....+
T Consensus 218 r~Wd~~sgk~L~t~ 231 (390)
T KOG3914|consen 218 RLWDITSGKLLDTC 231 (390)
T ss_pred EEEecccCCccccc
Confidence 99999888776443
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=99.02 E-value=7e-09 Score=92.17 Aligned_cols=161 Identities=16% Similarity=0.146 Sum_probs=109.4
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc-eeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccce
Q psy14815 137 VKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE-YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 215 (479)
Q Consensus 137 v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 215 (479)
...+..++++++++++..+....+++.+.... .+...... -...-+++.|..+......+..-|.++-+|+-+...
T Consensus 65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~-v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~-- 141 (390)
T KOG3914|consen 65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSC-VPKRPTAISFIREDTSVLVADKAGDVYSFDILSADS-- 141 (390)
T ss_pred ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEee-cccCcceeeeeeccceEEEEeecCCceeeeeecccc--
Confidence 34455677888899998888888888876543 22222222 122334555555555555555555554444433221
Q ss_pred EeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCC
Q psy14815 216 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 295 (479)
Q Consensus 216 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~ 295 (479)
.+...+-+|-+.++.++|+||+++++++..|..|++-.+..... +..+.-.|..-|..++.-++.
T Consensus 142 ~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~---------------IesfclGH~eFVS~isl~~~~ 206 (390)
T KOG3914|consen 142 GRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFV---------------IESFCLGHKEFVSTISLTDNY 206 (390)
T ss_pred cCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccc---------------hhhhccccHhheeeeeeccCc
Confidence 12345668999999999999999999999999999987633322 233333347788899887654
Q ss_pred CeEEEEeCCCeEEEcccCCCC
Q psy14815 296 DLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 296 ~~l~~~~~dg~i~vw~~~~~~ 316 (479)
.|+++|.|+++++||+.+++
T Consensus 207 -~LlS~sGD~tlr~Wd~~sgk 226 (390)
T KOG3914|consen 207 -LLLSGSGDKTLRLWDITSGK 226 (390)
T ss_pred -eeeecCCCCcEEEEecccCC
Confidence 58999999999999999998
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.01 E-value=5.8e-09 Score=89.48 Aligned_cols=224 Identities=14% Similarity=0.223 Sum_probs=147.1
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCe---EEEeEEEeCCC------------CcEEEEEEcCCC--CEEEE
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ---FECNATLEGHE------------NEVKSVTWSKNG--QFLAT 151 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~---~~~~~~~~~~~------------~~v~~l~~~~~~--~~l~~ 151 (479)
....|+++.|...|.++++|...|.|.++.-+... ......+++|. ..|..+.|..++ ..++.
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl 104 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL 104 (460)
T ss_pred ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence 45789999999999999999999999999755432 22333455554 357788887644 35777
Q ss_pred EeCCCcEEEEEeCCCCc-------------------e---e------------e-----eee-eeccccceeEEEEecCC
Q psy14815 152 CSRDKSVWVWEVGEEDE-------------------Y---E------------C-----AAV-INAHIQDVKKVRFHPFD 191 (479)
Q Consensus 152 ~~~dg~i~vwd~~~~~~-------------------~---~------------~-----~~~-~~~~~~~v~~l~~~~~~ 191 (479)
.+.|.+|++|.+..... . + . .+. -..|..-+.++.|+.+.
T Consensus 105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~ 184 (460)
T COG5170 105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDK 184 (460)
T ss_pred ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCch
Confidence 77999999998864310 0 0 0 001 13466668899999888
Q ss_pred CEEEEEEcCCcEEEEecCCcccceEeeeeecCCC-----ccEEEEEEccCC-CEEEEeeCCCeEEEEeccCCCCCCCCCC
Q psy14815 192 NILASASYDDTVKLFKEDKAEADWINFATLKSHT-----STVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPT 265 (479)
Q Consensus 192 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 265 (479)
..++++ .|=.|.+|++......+. +..++.|. ..|++..|+|.. ..+.-.+..|.|++-|+++...-.....
T Consensus 185 et~lSa-DdLrINLWnl~i~D~sFn-IVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~k 262 (460)
T COG5170 185 ETLLSA-DDLRINLWNLEIIDGSFN-IVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKK 262 (460)
T ss_pred heeeec-cceeeeeccccccCCceE-EEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchh
Confidence 877766 466899999986654332 33344443 457888999864 4555666789999999985432111000
Q ss_pred CCC-CCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 266 PDN-DSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 266 ~~~-~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
... ...+....-+.+. ...|.++.|+++|+++++-+. -++++||++..+
T Consensus 263 lfe~~~D~v~~~ff~ei-vsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k 312 (460)
T COG5170 263 LFELTIDGVDVDFFEEI-VSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAK 312 (460)
T ss_pred hhhhccCcccchhHHHH-hhhhcceEEcCCCcEEEEecc-ceEEEEeccccc
Confidence 000 0000001112222 457899999999999987754 599999998876
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=99.01 E-value=4e-06 Score=74.81 Aligned_cols=222 Identities=15% Similarity=0.092 Sum_probs=139.7
Q ss_pred EEEECC-CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEE
Q psy14815 16 NVSWNP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 94 (479)
Q Consensus 16 ~l~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~ 94 (479)
++.|.+ ++.++++--..+.|..|+..++.... + .. ....
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~----------------------~-----------------~~-~~~~ 43 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV----------------------I-----------------DL-PGPN 43 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE----------------------E-----------------ES-SSEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE----------------------E-----------------ec-CCCc
Confidence 578888 66666776678888888876544211 0 01 1166
Q ss_pred EEEEC-CCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC---CCCcEEEEEEcCCCCEEEEEeCC--------CcEEEEE
Q psy14815 95 ETAWS-PCGNFIASASFDATTAVWDKRSGQFECNATLEG---HENEVKSVTWSKNGQFLATCSRD--------KSVWVWE 162 (479)
Q Consensus 95 ~v~~~-~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~---~~~~v~~l~~~~~~~~l~~~~~d--------g~i~vwd 162 (479)
.+++. ++ ..++.+... .+.++|..+++...+..... .....+.+++.++|++.++.... |.+..++
T Consensus 44 G~~~~~~~-g~l~v~~~~-~~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~ 121 (246)
T PF08450_consen 44 GMAFDRPD-GRLYVADSG-GIAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRID 121 (246)
T ss_dssp EEEEECTT-SEEEEEETT-CEEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEE
T ss_pred eEEEEccC-CEEEEEEcC-ceEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEEC
Confidence 67777 56 455555554 45666999998666666531 34568899999999976665543 4455566
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCCEEE-EEEcCCcEEEEecCCcccce---EeeeeecCCCccEEEEEEccCCC
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILA-SASYDDTVKLFKEDKAEADW---INFATLKSHTSTVWSLAFDRIGS 238 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~ 238 (479)
.. + +. ......-...+.++|+|+++.|+ +-+..+.|..|++....... ..+..+....+..-.++++.+|+
T Consensus 122 ~~-~---~~-~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~ 196 (246)
T PF08450_consen 122 PD-G---KV-TVVADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGN 196 (246)
T ss_dssp TT-S---EE-EEEEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-
T ss_pred CC-C---eE-EEEecCcccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCC
Confidence 55 2 11 11222234568999999998765 55677889999986433211 22223333334578899999999
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec-CCCCeEEEE
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC-HLTDLIATA 301 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~~l~~~ 301 (479)
..++....+.|.++|.. ++.+..+... ...+++++|. ++.+.|...
T Consensus 197 l~va~~~~~~I~~~~p~----------------G~~~~~i~~p-~~~~t~~~fgg~~~~~L~vT 243 (246)
T PF08450_consen 197 LWVADWGGGRIVVFDPD----------------GKLLREIELP-VPRPTNCAFGGPDGKTLYVT 243 (246)
T ss_dssp EEEEEETTTEEEEEETT----------------SCEEEEEE-S-SSSEEEEEEESTTSSEEEEE
T ss_pred EEEEEcCCCEEEEECCC----------------ccEEEEEcCC-CCCEEEEEEECCCCCEEEEE
Confidence 88887788999999953 3445555554 4589999994 665555443
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=98.99 E-value=3e-07 Score=95.84 Aligned_cols=203 Identities=15% Similarity=0.257 Sum_probs=126.1
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCC-------------C--eEE------EeEEEeC---------------
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRS-------------G--QFE------CNATLEG--------------- 132 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~-------------~--~~~------~~~~~~~--------------- 132 (479)
-...|.+++||||+..|+.++.++++.+.+-.- | +.. ....|.|
T Consensus 119 vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~ 198 (928)
T PF04762_consen 119 VDSGILAASWSPDEELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTV 198 (928)
T ss_pred EcCcEEEEEECCCcCEEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCC
Confidence 467999999999999999999999888765210 0 000 0001100
Q ss_pred ---------CCCcEEEEEEcCCCCEEEEEeC---C---CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEE
Q psy14815 133 ---------HENEVKSVTWSKNGQFLATCSR---D---KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASA 197 (479)
Q Consensus 133 ---------~~~~v~~l~~~~~~~~l~~~~~---d---g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~ 197 (479)
....-..++|..||.+|++.+. . ..+|+|+-+. ........-.+--.+++|-|.|+++++.
T Consensus 199 ~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~ReG----~L~stSE~v~gLe~~l~WrPsG~lIA~~ 274 (928)
T PF04762_consen 199 PKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSREG----ELQSTSEPVDGLEGALSWRPSGNLIASS 274 (928)
T ss_pred CccccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCCc----eEEeccccCCCccCCccCCCCCCEEEEE
Confidence 2234568899999999999875 2 4689999763 2111111222223478999999999988
Q ss_pred Ec---CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEE
Q psy14815 198 SY---DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC 274 (479)
Q Consensus 198 ~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 274 (479)
.. ...|.+|..+.-. .......+......|..+.|++++..|+..-.|. |.+|-..+. -|-.
T Consensus 275 q~~~~~~~VvFfErNGLr-hgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NY-------------HWYL 339 (928)
T PF04762_consen 275 QRLPDRHDVVFFERNGLR-HGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNY-------------HWYL 339 (928)
T ss_pred EEcCCCcEEEEEecCCcE-eeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCC-------------EEEE
Confidence 75 3457777654332 2222222234567899999999999999877665 999976332 2334
Q ss_pred EEEEeccccccEEEEEecCCCC-eEEEEeCCCeEEEc
Q psy14815 275 VCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIF 310 (479)
Q Consensus 275 ~~~~~~~~~~~i~~l~~~~~~~-~l~~~~~dg~i~vw 310 (479)
.+.+.......+..+.|+|... .|...+.+|.+..+
T Consensus 340 Kqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~ 376 (928)
T PF04762_consen 340 KQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIY 376 (928)
T ss_pred EEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEE
Confidence 4444433334455577877533 35555554555443
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=98.99 E-value=4.6e-10 Score=108.77 Aligned_cols=202 Identities=16% Similarity=0.191 Sum_probs=145.1
Q ss_pred CcccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 1 ~~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
|...++++.|+..-+|++|+-+.++|+.|+-.|.|+++++.+|......
T Consensus 1091 Fr~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~------------------------------- 1139 (1516)
T KOG1832|consen 1091 FRSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESV------------------------------- 1139 (1516)
T ss_pred cccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccc-------------------------------
Confidence 4567889999999999999999999999999999999999988876554
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEEECCC--eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcE
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASASFDA--TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 158 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i 158 (479)
.+|.++|+-+.=+.+|..+++.+.-. -..+|++.+ .....+.+. .-.++.|+.....-+.|+.....
T Consensus 1140 ------ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s-~~~~~Hsf~----ed~~vkFsn~~q~r~~gt~~d~a 1208 (1516)
T KOG1832|consen 1140 ------NCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASS-TGGPRHSFD----EDKAVKFSNSLQFRALGTEADDA 1208 (1516)
T ss_pred ------cccccccccccccCCcceeeeeccccCchHHHhcccc-ccCcccccc----ccceeehhhhHHHHHhcccccce
Confidence 57999999999888998877765433 477999865 222444544 34578898765556667676789
Q ss_pred EEEEeCCCCceee-eeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC
Q psy14815 159 WVWEVGEEDEYEC-AAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG 237 (479)
Q Consensus 159 ~vwd~~~~~~~~~-~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 237 (479)
.+||+.+...... +....+....-++..|+|+..+++ .|| .+||.+..+. +..+..... -..-.|+|+|
T Consensus 1209 ~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIl---ndG--vLWDvR~~~a----Ih~FD~ft~-~~~G~FHP~g 1278 (1516)
T KOG1832|consen 1209 LLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLIL---NDG--VLWDVRIPEA----IHRFDQFTD-YGGGGFHPSG 1278 (1516)
T ss_pred EEEecccCcHHHHhcCcchhhhhhccccccCCCcceEe---eCc--eeeeeccHHH----Hhhhhhhee-cccccccCCC
Confidence 9999998854332 111122223347788999888776 455 5899997643 333333221 1233689999
Q ss_pred CEEEEeeCCCeEEEEeccCCCC
Q psy14815 238 SRLATCSDDATVKIWKEYKPGN 259 (479)
Q Consensus 238 ~~l~s~~~dg~i~iwd~~~~~~ 259 (479)
..++..+. |||+++...
T Consensus 1279 ~eVIINSE-----IwD~RTF~l 1295 (1516)
T KOG1832|consen 1279 NEVIINSE-----IWDMRTFKL 1295 (1516)
T ss_pred ceEEeech-----hhhhHHHHH
Confidence 99988764 899865543
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.4e-09 Score=93.04 Aligned_cols=160 Identities=17% Similarity=0.133 Sum_probs=114.7
Q ss_pred EEEEcC--CCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceE
Q psy14815 139 SVTWSK--NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 216 (479)
Q Consensus 139 ~l~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 216 (479)
.++|+- .+.. ++.+.+-.|-+-|+.++.. +.+. .++.|.++.|...+++++.|+.+|.|..+|++.......
T Consensus 216 ~CawSlni~gyh-fs~G~sqqv~L~nvetg~~----qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~ 289 (425)
T KOG2695|consen 216 SCAWSLNIMGYH-FSVGLSQQVLLTNVETGHQ----QSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNG 289 (425)
T ss_pred hhhhhhccceee-ecccccceeEEEEeecccc----cccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCC
Confidence 335553 2334 4455667788889888632 2232 467788999998899999999999999999997632211
Q ss_pred eeeeecCCCccEEEEEEcc-CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccc-cEEEEEecCC
Q psy14815 217 NFATLKSHTSTVWSLAFDR-IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR-TIYDISWCHL 294 (479)
Q Consensus 217 ~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~l~~~~~ 294 (479)
.....-.|.+.|+++..-. ++++|++.+.+|+|++||++..+.. +-+.++.||... .-.-+...+.
T Consensus 290 ~~a~rlyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~------------~~V~qYeGHvN~~a~l~~~v~~e 357 (425)
T KOG2695|consen 290 WCAQRLYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCK------------KSVMQYEGHVNLSAYLPAHVKEE 357 (425)
T ss_pred cceEEEEcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcc------------cceeeeecccccccccccccccc
Confidence 1223345889999988766 7889999999999999999655321 337888887221 1222334566
Q ss_pred CCeEEEEeCCCeEEEcccCCCC
Q psy14815 295 TDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 295 ~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
...+++++.|...|+|.++.+.
T Consensus 358 eg~I~s~GdDcytRiWsl~~gh 379 (425)
T KOG2695|consen 358 EGSIFSVGDDCYTRIWSLDSGH 379 (425)
T ss_pred cceEEEccCeeEEEEEecccCc
Confidence 7788999999999999999987
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=5.2e-07 Score=86.33 Aligned_cols=193 Identities=11% Similarity=0.016 Sum_probs=117.9
Q ss_pred cEEEEEECCCCCE-EEEEECC---CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEE-eCC--CcEEEEEeC
Q psy14815 92 TIRETAWSPCGNF-IASASFD---ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC-SRD--KSVWVWEVG 164 (479)
Q Consensus 92 ~v~~v~~~~~~~~-l~t~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~d--g~i~vwd~~ 164 (479)
......|+|||+. ++..+.+ ..|.++|+.+++...+.. ..+......|+|||+.++.. +.+ ..|.++|+.
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~---~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~ 265 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS---SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTN 265 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec---CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECC
Confidence 7788999999985 6654443 579999999987444433 34556678899999876644 334 457777877
Q ss_pred CCCceeeeeeeeccccceeEEEEecCCCEEEEEEc-CC--cEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE
Q psy14815 165 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DD--TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 165 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 241 (479)
++.. ..+..+........|+|||+.|+..+. .+ .|.+.|+.+++. ..+. ..+. . ...|+|+|++|+
T Consensus 266 ~g~~----~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~--~rlt-~~g~--~--~~~~SPDG~~Ia 334 (419)
T PRK04043 266 TKTL----TQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSV--EQVV-FHGK--N--NSSVSTYKNYIV 334 (419)
T ss_pred CCcE----EEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCe--EeCc-cCCC--c--CceECCCCCEEE
Confidence 6531 223333332345679999987777663 23 577778876553 1111 1111 1 248999999987
Q ss_pred EeeCC---------CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC---CeEEE
Q psy14815 242 TCSDD---------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD---DAIRI 309 (479)
Q Consensus 242 s~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d---g~i~v 309 (479)
..+.. ..|.+.|+..+.. ..+... .......|+|||+.++..+.+ ..+.+
T Consensus 335 ~~~~~~~~~~~~~~~~I~v~d~~~g~~----------------~~LT~~--~~~~~p~~SPDG~~I~f~~~~~~~~~L~~ 396 (419)
T PRK04043 335 YSSRETNNEFGKNTFNLYLISTNSDYI----------------RRLTAN--GVNQFPRFSSDGGSIMFIKYLGNQSALGI 396 (419)
T ss_pred EEEcCCCcccCCCCcEEEEEECCCCCe----------------EECCCC--CCcCCeEECCCCCEEEEEEccCCcEEEEE
Confidence 66543 2566666643321 122211 122357899999987766543 23666
Q ss_pred cccCCCC
Q psy14815 310 FKENPEA 316 (479)
Q Consensus 310 w~~~~~~ 316 (479)
.+++...
T Consensus 397 ~~l~g~~ 403 (419)
T PRK04043 397 IRLNYNK 403 (419)
T ss_pred EecCCCe
Confidence 6666543
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.7e-06 Score=75.91 Aligned_cols=223 Identities=13% Similarity=0.109 Sum_probs=139.1
Q ss_pred EEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEc-CCCCEEEEEeCCCcEEEEEeCCCCceeee
Q psy14815 95 ETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWS-KNGQFLATCSRDKSVWVWEVGEEDEYECA 172 (479)
Q Consensus 95 ~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~-~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 172 (479)
++.|.+ ++.++++-...+.|..|+..+++.. .+.... ...+.+. ++ ..++.+...+ +.++|..+++. +.+
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~---~~~~~~--~~G~~~~~~~-g~l~v~~~~~-~~~~d~~~g~~-~~~ 75 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVE---VIDLPG--PNGMAFDRPD-GRLYVADSGG-IAVVDPDTGKV-TVL 75 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEE---EEESSS--EEEEEEECTT-SEEEEEETTC-EEEEETTTTEE-EEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEE---EEecCC--CceEEEEccC-CEEEEEEcCc-eEEEecCCCcE-EEE
Confidence 567888 6666666667899999999988532 233222 6777887 55 4566665544 55568887632 223
Q ss_pred eeee--c-cccceeEEEEecCCCEEEEEEcC--------CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE
Q psy14815 173 AVIN--A-HIQDVKKVRFHPFDNILASASYD--------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 173 ~~~~--~-~~~~v~~l~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 241 (479)
.... . .....+.+++.|+|++.++.... |.|..++.. ++. ......-...+.++|+|+++.|+
T Consensus 76 ~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~-----~~~~~~~~~pNGi~~s~dg~~ly 149 (246)
T PF08450_consen 76 ADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKV-----TVVADGLGFPNGIAFSPDGKTLY 149 (246)
T ss_dssp EEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEE-----EEEEEEESSEEEEEEETTSSEEE
T ss_pred eeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeE-----EEEecCcccccceEECCcchhee
Confidence 2221 1 34567899999999977776543 457777776 331 12222234568999999999776
Q ss_pred -EeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCC
Q psy14815 242 -TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSD 320 (479)
Q Consensus 242 -s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 320 (479)
+-+..+.|..+++....... ...+....+... ....-.+++..+|.+.++....+.|.+++.+ ++
T Consensus 150 v~ds~~~~i~~~~~~~~~~~~--------~~~~~~~~~~~~-~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~---- 215 (246)
T PF08450_consen 150 VADSFNGRIWRFDLDADGGEL--------SNRRVFIDFPGG-PGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GK---- 215 (246)
T ss_dssp EEETTTTEEEEEEEETTTCCE--------EEEEEEEE-SSS-SCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SC----
T ss_pred ecccccceeEEEeccccccce--------eeeeeEEEcCCC-CcCCCcceEcCCCCEEEEEcCCCEEEEECCC-cc----
Confidence 55677888888886443210 011122222222 2347789999999988888888999999988 54
Q ss_pred ceeeEEEeccccccccceeEEEe-cCCCCCCC
Q psy14815 321 MVSFDLVHTEHRAHNQDVNCVAW-NPVVPEPQ 351 (479)
Q Consensus 321 ~~~~~~~~~~~~~h~~~v~~~~~-sp~~~~l~ 351 (479)
++..+... ...+++++| -|+...|.
T Consensus 216 -----~~~~i~~p-~~~~t~~~fgg~~~~~L~ 241 (246)
T PF08450_consen 216 -----LLREIELP-VPRPTNCAFGGPDGKTLY 241 (246)
T ss_dssp -----EEEEEE-S-SSSEEEEEEESTTSSEEE
T ss_pred -----EEEEEcCC-CCCEEEEEEECCCCCEEE
Confidence 33333322 447899999 46666554
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.8e-09 Score=65.37 Aligned_cols=38 Identities=29% Similarity=0.740 Sum_probs=36.1
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEe
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWV 39 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd 39 (479)
.++++|++|.+.|++|+|+|++++|++++.|++|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 36789999999999999999999999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.8e-08 Score=84.39 Aligned_cols=155 Identities=14% Similarity=0.195 Sum_probs=103.0
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccc-ccc---CCCc------------cceEEEeecCCcEE
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYE-KLH---GLPV------------ETSLRQLVEDKNIR 68 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~-~~~---~~~~------------~~~~~~~~~~~~i~ 68 (479)
+++..|+++-.+-+.+-.++.++++..||.+.+.+.+.-..+. .+. .... .+.+.....-+..+
T Consensus 83 ~~~a~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~ 162 (319)
T KOG4714|consen 83 KVLAKNSEIDPNDACTMTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFY 162 (319)
T ss_pred eeeeccCCCCCcccccccCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeecccee
Confidence 3444455444444445557789999999999999876521111 111 0000 11122222334566
Q ss_pred EecCCCCCCceeeeEEeccccCCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CC
Q psy14815 69 LWGKESFGNKFTAKAILSDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NG 146 (479)
Q Consensus 69 ~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~ 146 (479)
.|+++..+..... ......|.+++-+| ..+.+++|+.||.+.+||.+... .+...++.|+.+++.+-|+| ++
T Consensus 163 a~~~~p~~t~~~~-----~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~-~p~S~l~ahk~~i~eV~FHpk~p 236 (319)
T KOG4714|consen 163 ANTLDPIKTLIPS-----KKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVA-MPVSLLKAHKAEIWEVHFHPKNP 236 (319)
T ss_pred eeccccccccccc-----ccccccchhhhCCcccccEEEEecCCCeEEEEEccccc-chHHHHHHhhhhhhheeccCCCc
Confidence 6666532222111 12234599999999 45677888999999999999875 35566788999999999999 78
Q ss_pred CEEEEEeCCCcEEEEEeCC
Q psy14815 147 QFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 147 ~~l~~~~~dg~i~vwd~~~ 165 (479)
..|++++.||.+..||..+
T Consensus 237 ~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 237 EHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred hheeEecCCCcEEEEcCCC
Confidence 8999999999999999875
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=5.4e-07 Score=86.18 Aligned_cols=141 Identities=8% Similarity=0.045 Sum_probs=88.0
Q ss_pred CCcEEEEEECCCCCEEEEEE-C--CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-CC--cEEEEEe
Q psy14815 90 QRTIRETAWSPCGNFIASAS-F--DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DK--SVWVWEV 163 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~-~--dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg--~i~vwd~ 163 (479)
.+......|+|||+.++... . +..|.++|+.+++...+ ..+........|+|||+.|+..+. .| .|.+.|+
T Consensus 232 ~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~L---T~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl 308 (419)
T PRK04043 232 QGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQI---TNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKL 308 (419)
T ss_pred CCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEEEc---ccCCCccCccEECCCCCEEEEEECCCCCceEEEEEC
Confidence 44556678999998776543 2 35788889888864333 223322345689999997776654 33 5777777
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcC---------CcEEEEecCCcccceEeeeeecCCCccEEEEEEc
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD---------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD 234 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d---------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~ 234 (479)
.+++..+.. ..+. ....|+|+|+.|+..... ..|.+.|+.++.. ..+... .......|+
T Consensus 309 ~~g~~~rlt--~~g~----~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-----~~LT~~-~~~~~p~~S 376 (419)
T PRK04043 309 NSGSVEQVV--FHGK----NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-----RRLTAN-GVNQFPRFS 376 (419)
T ss_pred CCCCeEeCc--cCCC----cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-----EECCCC-CCcCCeEEC
Confidence 765321211 1111 124899999988877653 2678888876653 222222 123357899
Q ss_pred cCCCEEEEeeC
Q psy14815 235 RIGSRLATCSD 245 (479)
Q Consensus 235 ~~~~~l~s~~~ 245 (479)
|||+.++..+.
T Consensus 377 PDG~~I~f~~~ 387 (419)
T PRK04043 377 SDGGSIMFIKY 387 (419)
T ss_pred CCCCEEEEEEc
Confidence 99998876554
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.5e-06 Score=83.10 Aligned_cols=259 Identities=9% Similarity=-0.015 Sum_probs=150.7
Q ss_pred CCCeEEEeeCCCcEEEEecccccccccccCC--------CccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcE
Q psy14815 22 QGTMISSCGEDKNIRLWVMVIREPYEKLHGL--------PVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 93 (479)
Q Consensus 22 ~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~--------~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v 93 (479)
.+..+++++.+|.|.-+|..+|+.+...... ..+..++....++.+..+|.++....+.... ...+
T Consensus 64 ~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~------~~~~ 137 (377)
T TIGR03300 64 AGGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGADGGLVFVGTEKGEVIALDAEDGKELWRAKL------SSEV 137 (377)
T ss_pred ECCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEEcCCEEEEEcCCCEEEEEECCCCcEeeeecc------Ccee
Confidence 3667888888999999999998877554322 1244566667788888888875443333221 1122
Q ss_pred EEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcE-----EEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc
Q psy14815 94 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEV-----KSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 94 ~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v-----~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 168 (479)
.+.-.. .+..++.++.++.+..||.++++. +..++...... .+... .+..++.+..+|.+..+|.++++.
T Consensus 138 ~~~p~v-~~~~v~v~~~~g~l~a~d~~tG~~--~W~~~~~~~~~~~~~~~sp~~--~~~~v~~~~~~g~v~ald~~tG~~ 212 (377)
T TIGR03300 138 LSPPLV-ANGLVVVRTNDGRLTALDAATGER--LWTYSRVTPALTLRGSASPVI--ADGGVLVGFAGGKLVALDLQTGQP 212 (377)
T ss_pred ecCCEE-ECCEEEEECCCCeEEEEEcCCCce--eeEEccCCCceeecCCCCCEE--ECCEEEEECCCCEEEEEEccCCCE
Confidence 111111 345777788899999999999873 33333221111 11111 134678888899999999988743
Q ss_pred eeeeeeeeccc-c---ceeEEEEec--CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 169 YECAAVINAHI-Q---DVKKVRFHP--FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 169 ~~~~~~~~~~~-~---~v~~l~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
.-....-.... . ....+.-+| .+..+++++.+|.+..||..+++..|... .. ...... ..+..++.
T Consensus 213 ~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~--~~----~~~~p~--~~~~~vyv 284 (377)
T TIGR03300 213 LWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRD--AS----SYQGPA--VDDNRLYV 284 (377)
T ss_pred eeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeec--cC----CccCce--EeCCEEEE
Confidence 21111000000 0 000111111 25678888889999999999887544321 11 111222 24678888
Q ss_pred eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 243 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
++.||.+..+|...+... -...........+... .+..+++++.+|.++++|..+++
T Consensus 285 ~~~~G~l~~~d~~tG~~~---------------W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~ 341 (377)
T TIGR03300 285 TDADGVVVALDRRSGSEL---------------WKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGS 341 (377)
T ss_pred ECCCCeEEEEECCCCcEE---------------EccccccCCccccCEE--ECCEEEEEeCCCEEEEEECCCCC
Confidence 889999999998554321 1110000111111111 35688889999999999998887
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.3e-07 Score=96.50 Aligned_cols=163 Identities=13% Similarity=0.099 Sum_probs=109.1
Q ss_pred EEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCC---------------CCcEEEEEEcCCCCEEEE-EeCC
Q psy14815 93 IRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGH---------------ENEVKSVTWSKNGQFLAT-CSRD 155 (479)
Q Consensus 93 v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~---------------~~~v~~l~~~~~~~~l~~-~~~d 155 (479)
...++++| ++..+++.+.++.|++||..++... .+.+. -.....++++|+++.|++ -+.+
T Consensus 685 P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~---~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n 761 (1057)
T PLN02919 685 PWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTR---VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSES 761 (1057)
T ss_pred CeEEEEecCCCeEEEEECCCCeEEEEECCCCeEE---EEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCC
Confidence 45789999 5666677777899999999887522 12111 123567999999985554 4557
Q ss_pred CcEEEEEeCCCCceeee----------eeeec--------cccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEe
Q psy14815 156 KSVWVWEVGEEDEYECA----------AVINA--------HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 217 (479)
Q Consensus 156 g~i~vwd~~~~~~~~~~----------~~~~~--------~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 217 (479)
+.|++||+.++...... ..+.. .-.....++++++|+++++-..++.|++||..++......
T Consensus 762 ~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tia 841 (1057)
T PLN02919 762 SSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLA 841 (1057)
T ss_pred CeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEe
Confidence 89999999865321100 00000 0112358899999999888889999999999765421000
Q ss_pred ee---------eecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCC
Q psy14815 218 FA---------TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 258 (479)
Q Consensus 218 ~~---------~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 258 (479)
-. ...+.-.....++++++|+.+++-+.++.|++||+....
T Consensus 842 G~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~ 891 (1057)
T PLN02919 842 GTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGE 891 (1057)
T ss_pred ccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCc
Confidence 00 011122356789999999988888899999999987654
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.1e-08 Score=97.62 Aligned_cols=209 Identities=16% Similarity=0.283 Sum_probs=151.5
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCC--CEEEEEeCCCcEEEEEeCCC
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG--QFLATCSRDKSVWVWEVGEE 166 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~--~~l~~~~~dg~i~vwd~~~~ 166 (479)
-.+++.++..+|.|+-++.++.-| +.+.|+...-..+........-.|-...|+|.. .+-++......-.+|++...
T Consensus 23 v~~~~~a~si~p~grdi~lAsr~g-l~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~s 101 (1081)
T KOG0309|consen 23 VDGGFNAVSINPSGRDIVLASRQG-LYIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKS 101 (1081)
T ss_pred ecCcccceeeccccchhhhhhhcC-eEEEeccCCCCCceeeeccCcchhcceecccCCCCceeEEecCcchhhhhhhhcC
Confidence 356788899999999999988765 556666543211111111122356778888744 24444445556668998766
Q ss_pred CceeeeeeeeccccceeEEEEecCC-CEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeC
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 245 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 245 (479)
.....-..+.+|...|+.+.|+|+. ..+++++.|..+..||+++... ++.....-......++|+.....+.+.+.
T Consensus 102 s~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~---p~ys~~~w~s~asqVkwnyk~p~vlassh 178 (1081)
T KOG0309|consen 102 SSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHR---PFYSTSSWRSAASQVKWNYKDPNVLASSH 178 (1081)
T ss_pred CccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCc---ceeeeecccccCceeeecccCcchhhhcc
Confidence 5545556678999999999999955 6889999999999999998764 45555444556678899987777777777
Q ss_pred CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCC-CCeEEEEeCCCeEEEcccCCCC
Q psy14815 246 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL-TDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 246 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~-~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
.+.|++||++.+. .+++.+++| ...|+.++|..- ...+.+++.||+|+.||.....
T Consensus 179 g~~i~vwd~r~gs--------------~pl~s~K~~-vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt 235 (1081)
T KOG0309|consen 179 GNDIFVWDLRKGS--------------TPLCSLKGH-VSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKST 235 (1081)
T ss_pred CCceEEEeccCCC--------------cceEEeccc-ceeeehHHHhhhhhhhhcccCCCCceeeecccccc
Confidence 7889999997765 347788885 778899988753 3468889999999999987654
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.9e-08 Score=90.65 Aligned_cols=223 Identities=16% Similarity=0.096 Sum_probs=150.1
Q ss_pred ccCCcEEEEEECCCCCEEEEEECCCeEEEEECCC-CeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-CCcEEEEEeCC
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRS-GQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DKSVWVWEVGE 165 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~i~vwd~~~ 165 (479)
-|.+.|+.+... -.+++.+++.||.++.|.-.. .-.+.+..+..|...+.+++.+.++..+.+.+. |..++++|+.+
T Consensus 7 mhrd~i~hv~~t-ka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn 85 (558)
T KOG0882|consen 7 MHRDVITHVFPT-KAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVEN 85 (558)
T ss_pred cccceeeeEeee-hhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeec
Confidence 467777776554 457999999999999997544 222455566778889999999999999999877 99999999987
Q ss_pred CCceeeeeeeeccccceeEEEEecCC--CEEE-EEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 166 EDEYECAAVINAHIQDVKKVRFHPFD--NILA-SASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 166 ~~~~~~~~~~~~~~~~v~~l~~~~~~--~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
-.....+. +..-++.+. ...+|.. ..++ +.-.+|.+.++|-..... +....-.-|..+|..+.+++-+..+++
T Consensus 86 ~DminmiK-L~~lPg~a~-wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~--q~~~fkklH~sPV~~i~y~qa~Ds~vS 161 (558)
T KOG0882|consen 86 FDMINMIK-LVDLPGFAE-WVTSKGDKISLIAVSLFKSGKIFVVDGFGDFC--QDGYFKKLHFSPVKKIRYNQAGDSAVS 161 (558)
T ss_pred cchhhhcc-cccCCCceE-EecCCCCeeeeEEeecccCCCcEEECCcCCcC--ccceecccccCceEEEEeeccccceee
Confidence 64322211 111122221 1122211 1333 334678999999876543 234445569999999999999999999
Q ss_pred eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 243 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
....|.|.-|.....-+...-...-..+....+..+.. ......++.|+|++..+.+-+.|..|+++...+++
T Consensus 162 iD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K-~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGk 234 (558)
T KOG0882|consen 162 IDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPK-AKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGK 234 (558)
T ss_pred ccccceeEeecCCCcccCccccccccccccchhhcccc-cccCccceEEccccCcccccCcccEEEEEEeccch
Confidence 99999999998763111110000000011111112222 25578899999999999999999999999999886
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.1e-07 Score=89.63 Aligned_cols=246 Identities=13% Similarity=0.135 Sum_probs=164.4
Q ss_pred cccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
|...-.++.|+|.| +||-|+. ..|.+-|..+-+.++.+ ..|
T Consensus 14 ~~sN~~A~Dw~~~G-LiAygsh-slV~VVDs~s~q~iqsi-------------------------------------e~h 54 (1062)
T KOG1912|consen 14 SRSNRNAADWSPSG-LIAYGSH-SLVSVVDSRSLQLIQSI-------------------------------------ELH 54 (1062)
T ss_pred CcccccccccCccc-eEEEecC-ceEEEEehhhhhhhhcc-------------------------------------ccC
Confidence 33446778899877 7777764 47888888777777665 457
Q ss_pred CCcEEEEEECCC------------CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC---CC-CEEEEEe
Q psy14815 90 QRTIRETAWSPC------------GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK---NG-QFLATCS 153 (479)
Q Consensus 90 ~~~v~~v~~~~~------------~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~---~~-~~l~~~~ 153 (479)
...|+.+.|.|- .-+||++.-.|.|.+||...+. .+..+..|.+++..++|-+ +. ..|++-.
T Consensus 55 ~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s--~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh 132 (1062)
T KOG1912|consen 55 QSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLAS--VINWLSHSNDSVQDLCWVPARDDSRDVLLAIH 132 (1062)
T ss_pred ccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhh--hhhhhcCCCcchhheeeeeccCcchheeEEec
Confidence 788999999872 1357778888999999998885 5667788899999999976 33 4566666
Q ss_pred CCCcEEEEEeCCCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccce---EeeeeecCCCc---
Q psy14815 154 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADW---INFATLKSHTS--- 226 (479)
Q Consensus 154 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~---~~~~~~~~~~~--- 226 (479)
....+.+|+..+++ .+-..........|+.+.| +.+.+..-+..|.+.+-+.-.....- +.++.-..|..
T Consensus 133 ~ss~lvLwntdtG~---k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~ 209 (1062)
T KOG1912|consen 133 GSSTLVLWNTDTGE---KFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAH 209 (1062)
T ss_pred CCcEEEEEEccCCc---eeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhh
Confidence 77899999999984 3444444455677899999 56677777777877777654322110 11111111111
Q ss_pred -------------c---------EEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccc
Q psy14815 227 -------------T---------VWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR 284 (479)
Q Consensus 227 -------------~---------v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (479)
. ...++|+|.-+.++.......+.++|++.. .++....-. .+
T Consensus 210 lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~---------------~~l~vvpie-r~ 273 (1062)
T KOG1912|consen 210 LERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYE---------------CCLAVVPIE-RG 273 (1062)
T ss_pred hhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhh---------------ceeEEEEec-cC
Confidence 0 123556776665555666778999998433 233333322 33
Q ss_pred cEEEEEecCCC--CeEEEEeCCCeEEEcccCCC
Q psy14815 285 TIYDISWCHLT--DLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 285 ~i~~l~~~~~~--~~l~~~~~dg~i~vw~~~~~ 315 (479)
.+.-+.+-|++ ..|++...||.+.+|-.+..
T Consensus 274 ~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~ 306 (1062)
T KOG1912|consen 274 GAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEE 306 (1062)
T ss_pred CcceeEeccCCCcceEEEEecCCeEEEEEeecc
Confidence 44556666654 47999999999999976653
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=98.89 E-value=6.7e-09 Score=95.78 Aligned_cols=211 Identities=17% Similarity=0.210 Sum_probs=144.1
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCC-----CeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS-----GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
..+|...|..++--.+.+-+++++.|.+|++|.++. +...+..++..|..+|.++.|..+-+++++ .||-|.+
T Consensus 731 f~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~S--cD~giHl 808 (1034)
T KOG4190|consen 731 FTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIAS--CDGGIHL 808 (1034)
T ss_pred ccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeee--ccCccee
Confidence 468999999988877888999999999999999864 223367888999999999999988777765 5789999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEec--CCCEEEEE-EcCCcEEEEecCCcccceEe-eeeecCCCccEEEEEEccC
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHP--FDNILASA-SYDDTVKLFKEDKAEADWIN-FATLKSHTSTVWSLAFDRI 236 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~~~-~~dg~i~i~d~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~ 236 (479)
||.--+.....+..-.. .+.+..+..-+ +...++.| +...+|+++|.+..+-.... +....+....+.+++..+.
T Consensus 809 WDPFigr~Laq~~dapk-~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~ 887 (1034)
T KOG4190|consen 809 WDPFIGRLLAQMEDAPK-EGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADK 887 (1034)
T ss_pred ecccccchhHhhhcCcc-cCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccC
Confidence 99755432221111111 22333344334 34445554 67889999999976531111 1112344567899999999
Q ss_pred CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEE-cccCCC
Q psy14815 237 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI-FKENPE 315 (479)
Q Consensus 237 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~v-w~~~~~ 315 (479)
|+.++.+-.+|.|.+.|.+++.. +..++.. ......++ .|..+.|+....|.++.| |....+
T Consensus 888 GN~lAa~LSnGci~~LDaR~G~v---------------INswrpm-ecdllqla-apsdq~L~~saldHslaVnWhaldg 950 (1034)
T KOG4190|consen 888 GNKLAAALSNGCIAILDARNGKV---------------INSWRPM-ECDLLQLA-APSDQALAQSALDHSLAVNWHALDG 950 (1034)
T ss_pred cchhhHHhcCCcEEEEecCCCce---------------eccCCcc-cchhhhhc-CchhHHHHhhcccceeEeeehhcCC
Confidence 99999999999999999876643 2222221 22222333 356677888888888888 876555
Q ss_pred C
Q psy14815 316 A 316 (479)
Q Consensus 316 ~ 316 (479)
.
T Consensus 951 i 951 (1034)
T KOG4190|consen 951 I 951 (1034)
T ss_pred e
Confidence 3
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.6e-06 Score=82.77 Aligned_cols=257 Identities=13% Similarity=0.039 Sum_probs=146.5
Q ss_pred CCCeEEEeeCCCcEEEEecccccccccccCC------C--ccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcE
Q psy14815 22 QGTMISSCGEDKNIRLWVMVIREPYEKLHGL------P--VETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 93 (479)
Q Consensus 22 ~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~------~--~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v 93 (479)
++..++.++.+|.+..+|..+|+.+...... + .+..++....++.+..+|.++....+..............
T Consensus 104 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~v~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~ 183 (377)
T TIGR03300 104 DGGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVLSPPLVANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGS 183 (377)
T ss_pred cCCEEEEEcCCCEEEEEECCCCcEeeeeccCceeecCCEEECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCC
Confidence 4567888888999999999888876544321 1 1345566667888999998764444433211000000000
Q ss_pred EEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCC--c---EEEEEEcC--CCCEEEEEeCCCcEEEEEeCCC
Q psy14815 94 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHEN--E---VKSVTWSK--NGQFLATCSRDKSVWVWEVGEE 166 (479)
Q Consensus 94 ~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~---v~~l~~~~--~~~~l~~~~~dg~i~vwd~~~~ 166 (479)
.+... .+..++.+..++.+..+|.++|+..-...+....+ . ...+.-+| .+..+++++.+|.+..||..++
T Consensus 184 ~sp~~--~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG 261 (377)
T TIGR03300 184 ASPVI--ADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSG 261 (377)
T ss_pred CCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCC
Confidence 01111 13467788888999999999986332222111000 0 00011111 3567888889999999999887
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCC
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD 246 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 246 (479)
+.. ..... ....... ..+..++.++.+|.+..+|..+++..|... .+. .....+... .+..+++++.+
T Consensus 262 ~~~---W~~~~--~~~~~p~--~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~-~~~--~~~~ssp~i--~g~~l~~~~~~ 329 (377)
T TIGR03300 262 RVL---WKRDA--SSYQGPA--VDDNRLYVTDADGVVVALDRRSGSELWKND-ELK--YRQLTAPAV--VGGYLVVGDFE 329 (377)
T ss_pred cEE---Eeecc--CCccCce--EeCCEEEEECCCCeEEEEECCCCcEEEccc-ccc--CCccccCEE--ECCEEEEEeCC
Confidence 432 21111 1111222 246678888899999999998877533321 111 111222222 36788999999
Q ss_pred CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccE-EEEEecCCCCeEEEEeCCCeEEEc
Q psy14815 247 ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTI-YDISWCHLTDLIATACGDDAIRIF 310 (479)
Q Consensus 247 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~l~~~~~~~~l~~~~~dg~i~vw 310 (479)
|.|+++|..++ +.+.++..+ ...+ .+..+. + ..|+.++.||.|+.+
T Consensus 330 G~l~~~d~~tG---------------~~~~~~~~~-~~~~~~sp~~~-~-~~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 330 GYLHWLSREDG---------------SFVARLKTD-GSGIASPPVVV-G-DGLLVQTRDGDLYAF 376 (377)
T ss_pred CEEEEEECCCC---------------CEEEEEEcC-CCccccCCEEE-C-CEEEEEeCCceEEEe
Confidence 99999997444 334444433 2222 122222 3 357788899998765
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.87 E-value=4.9e-08 Score=88.04 Aligned_cols=268 Identities=14% Similarity=0.099 Sum_probs=176.6
Q ss_pred cccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
|.+.|+.+.-+ ..+++.+++.||.++.|--..-. ..........|
T Consensus 8 hrd~i~hv~~t-ka~fiiqASlDGh~KFWkKs~is----------------------------------GvEfVKhFraH 52 (558)
T KOG0882|consen 8 HRDVITHVFPT-KAKFIIQASLDGHKKFWKKSRIS----------------------------------GVEFVKHFRAH 52 (558)
T ss_pred ccceeeeEeee-hhheEEeeecchhhhhcCCCCcc----------------------------------ceeehhhhHHH
Confidence 77888887655 46799999999999999521100 00111123578
Q ss_pred CCcEEEEEECCCCCEEEEEEC-CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCC--C-EEEE-EeCCCcEEEEEeC
Q psy14815 90 QRTIRETAWSPCGNFIASASF-DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG--Q-FLAT-CSRDKSVWVWEVG 164 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~--~-~l~~-~~~dg~i~vwd~~ 164 (479)
-..|.+++.+-++.++.|++. |..++++|+++-.......+..-.+.+..+ .+ .| . .+++ .-.+|.+.++|-.
T Consensus 53 L~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lPg~a~wv-~s-kGd~~s~IAVs~~~sg~i~VvD~~ 130 (558)
T KOG0882|consen 53 LGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDLPGFAEWV-TS-KGDKISLIAVSLFKSGKIFVVDGF 130 (558)
T ss_pred HHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhcccccCCCceEEe-cC-CCCeeeeEEeecccCCCcEEECCc
Confidence 888999999999999999887 999999999875433223333222322221 12 22 1 3333 3457899999987
Q ss_pred CCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCc------ccceE-----eeeeecCCCccEEEEEE
Q psy14815 165 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA------EADWI-----NFATLKSHTSTVWSLAF 233 (479)
Q Consensus 165 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~------~~~~~-----~~~~~~~~~~~v~~~~~ 233 (479)
.... +....-.-|..+|.++.++|-+..+++....|.|.-|..... ...+. .+..+........++.|
T Consensus 131 ~d~~-q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Ef 209 (558)
T KOG0882|consen 131 GDFC-QDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEF 209 (558)
T ss_pred CCcC-ccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEE
Confidence 6542 233344568899999999999999999999999999988731 11111 01112223456789999
Q ss_pred ccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceE-----------------EEEEEeccccccEEEEEecCCCC
Q psy14815 234 DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK-----------------CVCTLSGHHGRTIYDISWCHLTD 296 (479)
Q Consensus 234 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~i~~l~~~~~~~ 296 (479)
+|++..+.+-+.|..|++++.+.+.....+.......... ..+.+..+....-+.+.|...++
T Consensus 210 sp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~ 289 (558)
T KOG0882|consen 210 SPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGN 289 (558)
T ss_pred ccccCcccccCcccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCC
Confidence 9999999999999999999998776554433221111000 00112223233456788999999
Q ss_pred eEEEEeCCCeEEEcccCCCC
Q psy14815 297 LIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 297 ~l~~~~~dg~i~vw~~~~~~ 316 (479)
+|+-++-= -|+|.++.++.
T Consensus 290 flly~t~~-gikvin~~tn~ 308 (558)
T KOG0882|consen 290 FLLYGTIL-GIKVINLDTNT 308 (558)
T ss_pred EEEeecce-eEEEEEeecCe
Confidence 99988764 57899998886
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=98.83 E-value=7.2e-06 Score=72.68 Aligned_cols=240 Identities=13% Similarity=0.160 Sum_probs=150.1
Q ss_pred ceEEEEECC-CCCeEEEeeCCCc-EEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 13 RVWNVSWNP-QGTMISSCGEDKN-IRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 13 ~V~~l~~s~-~~~~l~t~~~dg~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
.-..++.+| ++..++.+-.-|+ ..+||..+++....+...+ ...+.+|
T Consensus 6 RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~-----------------------------gRHFyGH- 55 (305)
T PF07433_consen 6 RGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPP-----------------------------GRHFYGH- 55 (305)
T ss_pred cccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCC-----------------------------CCEEecC-
Confidence 345678888 5666777777766 5789998888766553211 1112345
Q ss_pred CcEEEEEECCCCCEEEEEEC-----CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-----------
Q psy14815 91 RTIRETAWSPCGNFIASASF-----DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR----------- 154 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~----------- 154 (479)
-.||+||++|++.-. .|.|-|||.. ..+..+..+..|.-....+.+.|||+.|+++..
T Consensus 56 -----g~fs~dG~~LytTEnd~~~g~G~IgVyd~~-~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~ 129 (305)
T PF07433_consen 56 -----GVFSPDGRLLYTTENDYETGRGVIGVYDAA-RGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRA 129 (305)
T ss_pred -----EEEcCCCCEEEEeccccCCCcEEEEEEECc-CCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCce
Confidence 479999999998743 4899999998 344577888888777788999999988887642
Q ss_pred -------CCcEEEEEeCCCCceeeeeee--eccccceeEEEEecCCCEEEEEEcCCc-------EEEEecCCcccce-Ee
Q psy14815 155 -------DKSVWVWEVGEEDEYECAAVI--NAHIQDVKKVRFHPFDNILASASYDDT-------VKLFKEDKAEADW-IN 217 (479)
Q Consensus 155 -------dg~i~vwd~~~~~~~~~~~~~--~~~~~~v~~l~~~~~~~~l~~~~~dg~-------i~i~d~~~~~~~~-~~ 217 (479)
+-++...|..+++.... ..+ ..|...++.+++.++|..++..-..|. |-+++....-... .+
T Consensus 130 kLNl~tM~psL~~ld~~sG~ll~q-~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p 208 (305)
T PF07433_consen 130 KLNLDTMQPSLVYLDARSGALLEQ-VELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGALRLLPAP 208 (305)
T ss_pred ecChhhcCCceEEEecCCCceeee-eecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCcceeccCC
Confidence 22455556666632222 123 347778999999999876665544432 3444433211000 00
Q ss_pred eeeecCCCccEEEEEEccCCCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC
Q psy14815 218 FATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 296 (479)
Q Consensus 218 ~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~ 296 (479)
........+.+-+|++++++..+++.+ .-+.+.+||..+.. .+.... -..+..++-.+++
T Consensus 209 ~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~---------------~~~~~~---l~D~cGva~~~~~- 269 (305)
T PF07433_consen 209 EEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGR---------------LLGSVP---LPDACGVAPTDDG- 269 (305)
T ss_pred hHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCC---------------Eeeccc---cCceeeeeecCCc-
Confidence 011223456789999999998885555 56789999975543 222222 2245666666666
Q ss_pred eEEEEeCCCeEEE
Q psy14815 297 LIATACGDDAIRI 309 (479)
Q Consensus 297 ~l~~~~~dg~i~v 309 (479)
++++. ..|.+..
T Consensus 270 f~~ss-G~G~~~~ 281 (305)
T PF07433_consen 270 FLVSS-GQGQLIR 281 (305)
T ss_pred eEEeC-CCccEEE
Confidence 55544 4455433
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.79 E-value=6.4e-08 Score=94.67 Aligned_cols=185 Identities=15% Similarity=0.173 Sum_probs=132.8
Q ss_pred CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeecccc
Q psy14815 101 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ 180 (479)
Q Consensus 101 ~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 180 (479)
++..++.|+....+..+|+++.+......+. .+.|.-+.. +++.+++|...|+|.+-|.++. +.+..+.+|.+
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~--a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~---~~iht~~aHs~ 218 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVS--ASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSF---ETIHTFDAHSG 218 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeeecc--CCceEEEEe--cCcEEEeecccceEEeecCCcC---ceeeeeecccc
Confidence 4567888888888999999988643333333 334555544 6789999999999999998887 77888999999
Q ss_pred ceeEEEEecCCCEEEEEEc---------CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC-CCEEEEeeCCCeEE
Q psy14815 181 DVKKVRFHPFDNILASASY---------DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLATCSDDATVK 250 (479)
Q Consensus 181 ~v~~l~~~~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~ 250 (479)
.+..+.. .|+.|++++. |..|+|||+|.... +..+.-+.++ .-+.|.|. ...++.++..|...
T Consensus 219 siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmra----l~PI~~~~~P-~flrf~Psl~t~~~V~S~sGq~q 291 (1118)
T KOG1275|consen 219 SISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRA----LSPIQFPYGP-QFLRFHPSLTTRLAVTSQSGQFQ 291 (1118)
T ss_pred ceeeeec--cCCeEEEeecccccccccccchhhhhhhhhhhc----cCCcccccCc-hhhhhcccccceEEEEeccccee
Confidence 9877665 5899999885 55689999996442 3333333333 44667775 35678888899999
Q ss_pred EEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcc
Q psy14815 251 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 251 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~ 311 (479)
+-|.....++.. . +..+.. .+..+..++++++++.++.|..+|.|.+|.
T Consensus 292 ~vd~~~lsNP~~----------~-~~~v~p-~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 292 FVDTATLSNPPA----------G-VKMVNP-NGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred eccccccCCCcc----------c-eeEEcc-CCCcceeEEecCCCceEEEecccCcEeeec
Confidence 998543333210 0 111111 244599999999999999999999999998
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=98.78 E-value=9.2e-07 Score=86.11 Aligned_cols=112 Identities=17% Similarity=0.328 Sum_probs=86.4
Q ss_pred ceEEEEECCCCCeEEEee----CCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 13 RVWNVSWNPQGTMISSCG----EDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~----~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
.-+-.+|+|...+++.++ ..|+|.||- ++|++-... .
T Consensus 17 vsti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~V--------------------------------------t 57 (1416)
T KOG3617|consen 17 VSTISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDV--------------------------------------T 57 (1416)
T ss_pred cccccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCccc--------------------------------------c
Confidence 334467999999998886 457888883 444432211 1
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCC
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~ 165 (479)
-.-.+++++|+|..-.|+.|-.-|.+.+|...+.+ .-.....|..++..+.||++|..++++..-|.+.+|....
T Consensus 58 ~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e--~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~ 132 (1416)
T KOG3617|consen 58 YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTE--THTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDV 132 (1416)
T ss_pred cceehhhhccChHHHHHhhccccceeEEEecCCce--eeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEeee
Confidence 12235669999999899999999999999987764 3445567999999999999999999999999999998763
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.9e-08 Score=86.52 Aligned_cols=154 Identities=13% Similarity=0.207 Sum_probs=115.4
Q ss_pred EEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc--eeeeeeeecccccee
Q psy14815 106 ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE--YECAAVINAHIQDVK 183 (479)
Q Consensus 106 ~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~v~ 183 (479)
++.+.+..|-+-|+++|. ...|. ..+.|.++.|...+++++.|+.+|.|..+|++...+ ..+.. .-.|.+.|+
T Consensus 228 fs~G~sqqv~L~nvetg~---~qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~-rlyh~Ssvt 302 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGH---QQSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQ-RLYHDSSVT 302 (425)
T ss_pred ecccccceeEEEEeeccc---ccccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceE-EEEcCcchh
Confidence 555667889999999984 34444 567899999999899999999999999999987622 12222 235888899
Q ss_pred EEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEE--EEccCCCEEEEeeCCCeEEEEeccCCCCC
Q psy14815 184 KVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSL--AFDRIGSRLATCSDDATVKIWKEYKPGNS 260 (479)
Q Consensus 184 ~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 260 (479)
++..-. ++++|++.+.+|+|++||++..+. ...+.++.+|-..-.-+ -..+....+++++.|...|||.++.+...
T Consensus 303 slq~Lq~s~q~LmaS~M~gkikLyD~R~~K~-~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl 381 (425)
T KOG2695|consen 303 SLQILQFSQQKLMASDMTGKIKLYDLRATKC-KKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLL 381 (425)
T ss_pred hhhhhccccceEeeccCcCceeEeeehhhhc-ccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCcee
Confidence 998776 788999999999999999986542 12367777775543333 33556778999999999999999777655
Q ss_pred CCCCC
Q psy14815 261 AGIPT 265 (479)
Q Consensus 261 ~~~~~ 265 (479)
..++.
T Consensus 382 ~tipf 386 (425)
T KOG2695|consen 382 CTIPF 386 (425)
T ss_pred eccCC
Confidence 44443
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.9e-06 Score=81.30 Aligned_cols=138 Identities=12% Similarity=0.117 Sum_probs=92.9
Q ss_pred eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEe----CCCc----EEEEEeCCCCceeeee-eeeccccce
Q psy14815 113 TTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCS----RDKS----VWVWEVGEEDEYECAA-VINAHIQDV 182 (479)
Q Consensus 113 ~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~----~dg~----i~vwd~~~~~~~~~~~-~~~~~~~~v 182 (479)
.+.++....++.+.+..... +....++.|+. ++..+.+.. .+|. -.+|++...+. +.+. ..-..+..+
T Consensus 185 Nl~L~~~~~~klEvL~yirT-E~dPl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~kl-qrvsvtsipL~s~v 262 (545)
T PF11768_consen 185 NLHLLSCSGGKLEVLSYIRT-ENDPLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKL-QRVSVTSIPLPSQV 262 (545)
T ss_pred cEEEEEecCCcEEEEEEEEe-cCCcEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCce-eEEEEEEEecCCcc
Confidence 34444444444444444443 33446777876 555565543 3443 35577665432 2222 223566789
Q ss_pred eEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCC
Q psy14815 183 KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 258 (479)
Q Consensus 183 ~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 258 (479)
.+++++|+...++.|+.||.|.+||...+.. ......-..+.++|+|+|..+++|+..|.+.+||+.-..
T Consensus 263 ~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t------~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALsp 332 (545)
T PF11768_consen 263 ICCARSPSEDKLVLGCEDGSIILYDTTRGVT------LLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSP 332 (545)
T ss_pred eEEecCcccceEEEEecCCeEEEEEcCCCee------eeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecCc
Confidence 9999999999999999999999999986542 222334457889999999999999999999999986543
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.3e-08 Score=99.02 Aligned_cols=220 Identities=14% Similarity=0.136 Sum_probs=153.0
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC--cEEEEEeC
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK--SVWVWEVG 164 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg--~i~vwd~~ 164 (479)
..|....+|++|+-+.+.|+.|+..|.|+++++.+|. ......+|...|+-+.=+.+|..+++.+.-. -..+|++.
T Consensus 1098 rd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~--~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~ 1175 (1516)
T KOG1832|consen 1098 RDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGS--MEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDAS 1175 (1516)
T ss_pred hccccceeeEEeecCCceEEeeeccceEEEEEccCcc--ccccccccccccccccccCCcceeeeeccccCchHHHhccc
Confidence 5678899999999999999999999999999999997 5567789999999999999999877766544 46789987
Q ss_pred CCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee
Q psy14815 165 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244 (479)
Q Consensus 165 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 244 (479)
... .....+. .-.++.|+.....-+.|+......+||++++..-...+....+.+..-+...|+|+.+.++
T Consensus 1176 s~~--~~~Hsf~----ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIl--- 1246 (1516)
T KOG1832|consen 1176 STG--GPRHSFD----EDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLIL--- 1246 (1516)
T ss_pred ccc--Ccccccc----ccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEe---
Confidence 632 2333332 2467889876555566666678999999987752221222222333346788999888776
Q ss_pred CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceee
Q psy14815 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSF 324 (479)
Q Consensus 245 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~ 324 (479)
.|| .+||.+.+... +.|... . .-..=.|+|.|.-++.-++ |||+++.+
T Consensus 1247 ndG--vLWDvR~~~aI---------------h~FD~f-t-~~~~G~FHP~g~eVIINSE-----IwD~RTF~-------- 1294 (1516)
T KOG1832|consen 1247 NDG--VLWDVRIPEAI---------------HRFDQF-T-DYGGGGFHPSGNEVIINSE-----IWDMRTFK-------- 1294 (1516)
T ss_pred eCc--eeeeeccHHHH---------------hhhhhh-e-ecccccccCCCceEEeech-----hhhhHHHH--------
Confidence 466 37998766332 222211 1 1112258999998887764 99999876
Q ss_pred EEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 325 DLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 325 ~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
+++.++ .-.-..+.|+..|..+...
T Consensus 1295 -lLh~VP---~Ldqc~VtFNstG~VmYa~ 1319 (1516)
T KOG1832|consen 1295 -LLHSVP---SLDQCAVTFNSTGDVMYAM 1319 (1516)
T ss_pred -HHhcCc---cccceEEEeccCccchhhh
Confidence 454443 2234568899999877444
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=98.73 E-value=8.2e-09 Score=97.03 Aligned_cols=165 Identities=18% Similarity=0.310 Sum_probs=110.4
Q ss_pred ccccCCcEEEEEECC-CCCEEEEEEC----CCeEEEEECCCC--eEEEeEEEeC-CCCcEEEEEEcCCCCEEEEEeCCCc
Q psy14815 86 SDGHQRTIRETAWSP-CGNFIASASF----DATTAVWDKRSG--QFECNATLEG-HENEVKSVTWSKNGQFLATCSRDKS 157 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~-~~~~l~t~~~----dg~i~iwd~~~~--~~~~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~dg~ 157 (479)
..++....++++|++ |.+.||.|-. |..+.|||+.++ .+.....+.+ ......+++|..+.+.+.+|.....
T Consensus 98 tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~ 177 (783)
T KOG1008|consen 98 TPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRS 177 (783)
T ss_pred cccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccccccccCccccccccCcchhhcccccch
Confidence 367889999999998 5677777733 568999999876 2222222322 3445668999989999999999999
Q ss_pred EEEEEeCCCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEe-cCCcccceEeeeeecC----CCccEEEE
Q psy14815 158 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFK-EDKAEADWINFATLKS----HTSTVWSL 231 (479)
Q Consensus 158 i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d-~~~~~~~~~~~~~~~~----~~~~v~~~ 231 (479)
+.++|++... .....-....+..+...| ..+++++.. ||.|.+|| .++-+. ++..+.. ....+..+
T Consensus 178 ~~ifdlRqs~----~~~~svnTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rnien---pl~~i~~~~N~~~~~l~~~ 249 (783)
T KOG1008|consen 178 VHIFDLRQSL----DSVSSVNTKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRNIEN---PLQIILRNENKKPKQLFAL 249 (783)
T ss_pred hhhhhhhhhh----hhhhhhhhhhcccceecCCCCCceeccc-cCceeeccchhhhcc---HHHHHhhCCCCcccceeeE
Confidence 9999998531 111111233466778888 667777655 99999999 443332 2222222 22358999
Q ss_pred EEccCCC-EEEEeeC-CCeEEEEeccCCC
Q psy14815 232 AFDRIGS-RLATCSD-DATVKIWKEYKPG 258 (479)
Q Consensus 232 ~~~~~~~-~l~s~~~-dg~i~iwd~~~~~ 258 (479)
+|.|... .+++... .++|+++|+....
T Consensus 250 aycPtrtglla~l~RdS~tIrlydi~~v~ 278 (783)
T KOG1008|consen 250 AYCPTRTGLLAVLSRDSITIRLYDICVVG 278 (783)
T ss_pred EeccCCcchhhhhccCcceEEEecccccC
Confidence 9998643 4555554 4689999986543
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=98.72 E-value=2.7e-06 Score=83.30 Aligned_cols=201 Identities=11% Similarity=0.127 Sum_probs=133.3
Q ss_pred EECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCc-EEEEEEcCCCCEEEEEeCCC-----cEEEEEeCCCC--c
Q psy14815 97 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE-VKSVTWSKNGQFLATCSRDK-----SVWVWEVGEED--E 168 (479)
Q Consensus 97 ~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-v~~l~~~~~~~~l~~~~~dg-----~i~vwd~~~~~--~ 168 (479)
+|++.+..++.|+.+|.|.+.+-.- .....++.+... |..+....+..+|++.+.|+ .+++|+++... .
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln~s~---~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~ 106 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILNSSF---QLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNN 106 (933)
T ss_pred EEcCCCceEEEeeccccEEEecccc---eeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCC
Confidence 4678889999999999999887432 244667777666 44444443446777777665 48999997542 1
Q ss_pred -eeee---eeee----ccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEE
Q psy14815 169 -YECA---AVIN----AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 169 -~~~~---~~~~----~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 240 (479)
..++ ..+. ....++++++.+.+-+.+|+|-.+|.|..+.-+-.........-.....++|+.+++..+++.+
T Consensus 107 sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~ 186 (933)
T KOG2114|consen 107 SPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSV 186 (933)
T ss_pred CcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCcee
Confidence 2333 1111 2356788999999999999999999999986432221111122233456799999999888873
Q ss_pred EEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 241 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+-...-..|.+|.+.... .....+..+ +.++.|-+|++...-+++++ +..+.+|+.+..+
T Consensus 187 lFv~Tt~~V~~y~l~gr~--------------p~~~~ld~~-G~~lnCss~~~~t~qfIca~-~e~l~fY~sd~~~ 246 (933)
T KOG2114|consen 187 LFVATTEQVMLYSLSGRT--------------PSLKVLDNN-GISLNCSSFSDGTYQFICAG-SEFLYFYDSDGRG 246 (933)
T ss_pred EEEEecceeEEEEecCCC--------------cceeeeccC-CccceeeecCCCCccEEEec-CceEEEEcCCCcc
Confidence 333345579999985221 113344554 88999999998666454443 4589999988665
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=98.71 E-value=6.9e-06 Score=70.59 Aligned_cols=191 Identities=13% Similarity=0.225 Sum_probs=106.2
Q ss_pred EEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEE
Q psy14815 15 WNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 94 (479)
Q Consensus 15 ~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~ 94 (479)
.-++||||+.+||.+...|+|+++|+...+ +..+..... ....-...|.
T Consensus 47 Rkl~WSpD~tlLa~a~S~G~i~vfdl~g~~-lf~I~p~~~------------------------------~~~d~~~Aia 95 (282)
T PF15492_consen 47 RKLAWSPDCTLLAYAESTGTIRVFDLMGSE-LFVIPPAMS------------------------------FPGDLSDAIA 95 (282)
T ss_pred eEEEECCCCcEEEEEcCCCeEEEEecccce-eEEcCcccc------------------------------cCCcccccee
Confidence 568999999999999999999999985422 222211000 0011234555
Q ss_pred EEEECCC------CCEEEEEECCCeEEEEECCCC---eEEEeEE--EeC-CCCcEEEEEEcCCCCEEEEEeCCCc-----
Q psy14815 95 ETAWSPC------GNFIASASFDATTAVWDKRSG---QFECNAT--LEG-HENEVKSVTWSKNGQFLATCSRDKS----- 157 (479)
Q Consensus 95 ~v~~~~~------~~~l~t~~~dg~i~iwd~~~~---~~~~~~~--~~~-~~~~v~~l~~~~~~~~l~~~~~dg~----- 157 (479)
.+.|.+. ...|++-..+|.++=|-+..+ ....... +.. +...|.++.++|..++|++|+....
T Consensus 96 gl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s 175 (282)
T PF15492_consen 96 GLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMS 175 (282)
T ss_pred eeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccc
Confidence 5555431 125666677788877765322 2223333 333 3668999999999888888765322
Q ss_pred ------EEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEE
Q psy14815 158 ------VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSL 231 (479)
Q Consensus 158 ------i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~ 231 (479)
+..|.+-++.+. .-...+-+...-...... .+|.+-+.. ...........|..|
T Consensus 176 ~a~~~GLtaWRiL~~~Py-------------yk~v~~~~~~~~~~~~~~---~~~~~~~~~----~fs~~~~~~d~i~km 235 (282)
T PF15492_consen 176 KASSCGLTAWRILSDSPY-------------YKQVTSSEDDITASSKRR---GLLRIPSFK----FFSRQGQEQDGIFKM 235 (282)
T ss_pred cccccCceEEEEcCCCCc-------------EEEccccCcccccccccc---ceeecccee----eeeccccCCCceEEE
Confidence 222332222110 000000001111111111 222221110 111112346789999
Q ss_pred EEccCCCEEEEeeCCCeEEEEeccC
Q psy14815 232 AFDRIGSRLATCSDDATVKIWKEYK 256 (479)
Q Consensus 232 ~~~~~~~~l~s~~~dg~i~iwd~~~ 256 (479)
..||||+.|++...+|.|.+|++..
T Consensus 236 SlSPdg~~La~ih~sG~lsLW~iPs 260 (282)
T PF15492_consen 236 SLSPDGSLLACIHFSGSLSLWEIPS 260 (282)
T ss_pred EECCCCCEEEEEEcCCeEEEEecCc
Confidence 9999999999999999999999844
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.2e-08 Score=96.02 Aligned_cols=239 Identities=13% Similarity=0.220 Sum_probs=149.1
Q ss_pred cCCcEEEEEECC--CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeC----CCcEEEE
Q psy14815 89 HQRTIRETAWSP--CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSR----DKSVWVW 161 (479)
Q Consensus 89 ~~~~v~~v~~~~--~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~----dg~i~vw 161 (479)
....+.|+++.- +...++.|..+|.|.+-.++...........++..+.++++|++ |.+.|+.|-. |..+.+|
T Consensus 55 dtqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iw 134 (783)
T KOG1008|consen 55 DTQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIW 134 (783)
T ss_pred cCCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccce
Confidence 345677888765 44688999999999999887654322344567888999999998 6667777743 5679999
Q ss_pred EeCCC--CceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEcc-CCC
Q psy14815 162 EVGEE--DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR-IGS 238 (479)
Q Consensus 162 d~~~~--~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~ 238 (479)
|+.+. .+........+......+++|..+.+++.+|.....+.++|++..... .. .-.+..+..+..+| .++
T Consensus 135 di~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~---~~--svnTk~vqG~tVdp~~~n 209 (783)
T KOG1008|consen 135 DINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDS---VS--SVNTKYVQGITVDPFSPN 209 (783)
T ss_pred ecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhh---hh--hhhhhhcccceecCCCCC
Confidence 99876 211111111123345668999988899999999999999999843321 11 11223455677788 677
Q ss_pred EEEEeeCCCeEEEEec-cCCCCCCCCCCCCCCCceEEEEEEecc---ccccEEEEEecCCCC-eEEEEeC-CCeEEEccc
Q psy14815 239 RLATCSDDATVKIWKE-YKPGNSAGIPTPDNDSVWKCVCTLSGH---HGRTIYDISWCHLTD-LIATACG-DDAIRIFKE 312 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~l~~~~~~~-~l~~~~~-dg~i~vw~~ 312 (479)
++++-. ||.|-+||. ++-+++. .++... ....+..++|+|... .+++.+. .++|++|++
T Consensus 210 Y~cs~~-dg~iAiwD~~rnienpl--------------~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi 274 (783)
T KOG1008|consen 210 YFCSNS-DGDIAIWDTYRNIENPL--------------QIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDI 274 (783)
T ss_pred ceeccc-cCceeeccchhhhccHH--------------HHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecc
Confidence 877665 999999993 3322221 111110 122488999999533 4555544 578999998
Q ss_pred CCCCCCC--CceeeEEEec-cccccc---cceeEEEecCCC
Q psy14815 313 NPEAGDS--DMVSFDLVHT-EHRAHN---QDVNCVAWNPVV 347 (479)
Q Consensus 313 ~~~~~~~--~~~~~~~~~~-~~~~h~---~~v~~~~~sp~~ 347 (479)
..-..+. +...+..... ....|. ..|.++.|++..
T Consensus 275 ~~v~t~~s~nn~~~~~~~s~~~~q~~~~~s~I~~f~wH~~s 315 (783)
T KOG1008|consen 275 CVVGTEGSANNSVFVNYESKYPVQPNSQCSGIDFFTWHTAS 315 (783)
T ss_pred cccCCcccccccceeeecccccccccccccceeecCcCcCC
Confidence 6543221 1111111111 112232 567888888876
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.2e-06 Score=83.30 Aligned_cols=185 Identities=13% Similarity=0.107 Sum_probs=124.3
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
.+.++|++++ +++|+-|+-+|.|++.+....- .. ...|.
T Consensus 39 ~D~is~~av~--~~~~~~GtH~g~v~~~~~~~~~-~~--------------------------------------~~~~s 77 (846)
T KOG2066|consen 39 NDAISCCAVH--DKFFALGTHRGAVYLTTCQGNP-KT--------------------------------------NFDHS 77 (846)
T ss_pred hhHHHHHHhh--cceeeeccccceEEEEecCCcc-cc--------------------------------------ccccc
Confidence 3556677766 6788999999999988753111 00 01222
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC-----CCEEEEEeCCCcEEEEEeCC
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN-----GQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~-----~~~l~~~~~dg~i~vwd~~~ 165 (479)
.. ..+|.++++|+.||+|.|-.+-+.+...... ...++.+++++|+ .+.+++|+.-| +.++.-+-
T Consensus 78 ~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~d---f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~w 147 (846)
T KOG2066|consen 78 SS------ILEGEYVASCSDDGKVVIGSLFTDDEITQYD---FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNW 147 (846)
T ss_pred cc------ccCCceEEEecCCCcEEEeeccCCccceeEe---cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhh
Confidence 22 5579999999999999999998886333333 3468999999997 56899999988 77766443
Q ss_pred CCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCc------cEEEEEEccCCCE
Q psy14815 166 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTS------TVWSLAFDRIGSR 239 (479)
Q Consensus 166 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~ 239 (479)
.+....+ .+..-.++|.++.|. |+++|-++.+| |++||...... +..+..... .-..+.|.++. .
T Consensus 148 lgnk~~v-~l~~~eG~I~~i~W~--g~lIAWand~G-v~vyd~~~~~~----l~~i~~p~~~~R~e~fpphl~W~~~~-~ 218 (846)
T KOG2066|consen 148 LGNKDSV-VLSEGEGPIHSIKWR--GNLIAWANDDG-VKVYDTPTRQR----LTNIPPPSQSVRPELFPPHLHWQDED-R 218 (846)
T ss_pred hcCccce-eeecCccceEEEEec--CcEEEEecCCC-cEEEeccccce----eeccCCCCCCCCcccCCCceEecCCC-e
Confidence 2221222 455667899999997 88999888776 99999986553 222222112 12457777654 3
Q ss_pred EEEeeCCCeEEEEeccC
Q psy14815 240 LATCSDDATVKIWKEYK 256 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~ 256 (479)
|+.| ...+|+|..+++
T Consensus 219 LVIG-W~d~v~i~~I~~ 234 (846)
T KOG2066|consen 219 LVIG-WGDSVKICSIKK 234 (846)
T ss_pred EEEe-cCCeEEEEEEec
Confidence 4444 555799999873
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.1e-05 Score=73.03 Aligned_cols=271 Identities=14% Similarity=0.130 Sum_probs=137.2
Q ss_pred ceEEEEECCCCCeEEEeeCCCcEEEEecccccccc-cccCCCcc-ceEEEeecCCcEEEecCCC---CC-CceeeeEEec
Q psy14815 13 RVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYE-KLHGLPVE-TSLRQLVEDKNIRLWGKES---FG-NKFTAKAILS 86 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~-~~~~~~~~-~~~~~~~~~~~i~~w~~~~---~~-~~~~~~~~~~ 86 (479)
.|+++.|+++..-|+.|...|.|.||.+...+... .-.....+ ...-....++.-.+-|+.. .+ .+......+.
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 58999999999999999999999999876644332 10000000 0000011111222233322 11 1122233334
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC------CCCcEEEEEEcC-----CC---CEEEEE
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG------HENEVKSVTWSK-----NG---QFLATC 152 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~------~~~~v~~l~~~~-----~~---~~l~~~ 152 (479)
....++|++++.|.- .+++.|..+|.+.|.|++.........+.. ....++++.|.- |+ -.+++|
T Consensus 83 ~~~~g~vtal~~S~i-GFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG 161 (395)
T PF08596_consen 83 DAKQGPVTALKNSDI-GFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG 161 (395)
T ss_dssp ---S-SEEEEEE-BT-SEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred eccCCcEeEEecCCC-cEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence 555899999999844 499999999999999998876443333333 234688898873 33 378999
Q ss_pred eCCCcEEEEEeCC--CCce--eeeeeeeccccceeEEE-EecC-----------------C---CEEEEEEcCCcEEEEe
Q psy14815 153 SRDKSVWVWEVGE--EDEY--ECAAVINAHIQDVKKVR-FHPF-----------------D---NILASASYDDTVKLFK 207 (479)
Q Consensus 153 ~~dg~i~vwd~~~--~~~~--~~~~~~~~~~~~v~~l~-~~~~-----------------~---~~l~~~~~dg~i~i~d 207 (479)
+..|.+.+|.+.- ...+ +.......+.+++..+. ++.+ + +-++....+..++++.
T Consensus 162 Tn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~~ 241 (395)
T PF08596_consen 162 TNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVFK 241 (395)
T ss_dssp ETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE-
T ss_pred eCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEEe
Confidence 9999999998852 1111 11222224555665554 3221 0 2344455577899999
Q ss_pred cCCcccceEeeeeecCCCccEEEEEE-----ccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc-
Q psy14815 208 EDKAEADWINFATLKSHTSTVWSLAF-----DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH- 281 (479)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 281 (479)
..+.+. ..+.+ ........+.+ ...+..|++-..+|.+++|.+.. .+.+....-.
T Consensus 242 ~~~~k~---~~K~~-~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~---------------Lkei~~~~l~~ 302 (395)
T PF08596_consen 242 PPKSKG---AHKSF-DDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPS---------------LKEIKSVSLPP 302 (395)
T ss_dssp TT---E---EEEE--SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT-----------------EEEEEE-SS
T ss_pred CCCCcc---cceee-ccccccceEEEEeecccCCceEEEEEECCCcEEEEECCC---------------chHhhcccCCC
Confidence 887653 12222 22222333444 23466788888999999999833 3344444332
Q ss_pred --ccccEEEEEecCCCCeEEEEeC
Q psy14815 282 --HGRTIYDISWCHLTDLIATACG 303 (479)
Q Consensus 282 --~~~~i~~l~~~~~~~~l~~~~~ 303 (479)
....+...+++++|+.++-.+.
T Consensus 303 ~~d~~~~~~ssis~~Gdi~~~~gp 326 (395)
T PF08596_consen 303 PLDSRRLSSSSISRNGDIFYWTGP 326 (395)
T ss_dssp ---HHHHTT-EE-TTS-EEEE-SS
T ss_pred ccccccccccEECCCCCEEEEeCc
Confidence 1234455677888887665543
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.4e-05 Score=70.97 Aligned_cols=232 Identities=16% Similarity=0.114 Sum_probs=141.6
Q ss_pred cEEEEEECC-CCCEEEEEECCC-eEEEEECCCCeEEEeEEEeCCCCc--EEEEEEcCCCCEEEEEeC-----CCcEEEEE
Q psy14815 92 TIRETAWSP-CGNFIASASFDA-TTAVWDKRSGQFECNATLEGHENE--VKSVTWSKNGQFLATCSR-----DKSVWVWE 162 (479)
Q Consensus 92 ~v~~v~~~~-~~~~l~t~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~--v~~l~~~~~~~~l~~~~~-----dg~i~vwd 162 (479)
....++.+| ....++.+-.-| ...+||..+++. ...+....+. --.-.|++||++|++.-. .|.|-|||
T Consensus 6 RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~--~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd 83 (305)
T PF07433_consen 6 RGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQL--LQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYD 83 (305)
T ss_pred cccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCce--eeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEE
Confidence 345678888 456666776655 577899999873 3333332221 124579999999998754 47899999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc------------------CCcEEEEecCCcccceEeeeee--c
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY------------------DDTVKLFKEDKAEADWINFATL--K 222 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~------------------dg~i~i~d~~~~~~~~~~~~~~--~ 222 (479)
... .+..+..+..|.-.-..+.+.|+++.|+++.. +..+...|..+++. .....+ .
T Consensus 84 ~~~--~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~l--l~q~~Lp~~ 159 (305)
T PF07433_consen 84 AAR--GYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGAL--LEQVELPPD 159 (305)
T ss_pred CcC--CcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCce--eeeeecCcc
Confidence 983 34677778877777788999999988877631 22344455555543 111224 3
Q ss_pred CCCccEEEEEEccCCCEEEEeeCCC-------eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCC
Q psy14815 223 SHTSTVWSLAFDRIGSRLATCSDDA-------TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 295 (479)
Q Consensus 223 ~~~~~v~~~~~~~~~~~l~s~~~dg-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~ 295 (479)
.|...+..++++++|..++..-..| -|-+++... ....+..+. .. ... -...+-+|++++++
T Consensus 160 ~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~--~~~~~~~p~--~~------~~~-l~~Y~gSIa~~~~g 228 (305)
T PF07433_consen 160 LHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGG--ALRLLPAPE--EQ------WRR-LNGYIGSIAADRDG 228 (305)
T ss_pred ccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCC--cceeccCCh--HH------HHh-hCCceEEEEEeCCC
Confidence 4777899999998887665543332 122222211 111110000 00 011 14578999999999
Q ss_pred CeEEEE-eCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 296 DLIATA-CGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 296 ~~l~~~-~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
.+++++ -..+.+.+||..++. ++... .-..+..++-.+++ ++.+.
T Consensus 229 ~~ia~tsPrGg~~~~~d~~tg~---------~~~~~---~l~D~cGva~~~~~-f~~ss 274 (305)
T PF07433_consen 229 RLIAVTSPRGGRVAVWDAATGR---------LLGSV---PLPDACGVAPTDDG-FLVSS 274 (305)
T ss_pred CEEEEECCCCCEEEEEECCCCC---------Eeecc---ccCceeeeeecCCc-eEEeC
Confidence 877554 456889999999987 33222 22345566666666 44433
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.1e-07 Score=57.36 Aligned_cols=38 Identities=32% Similarity=0.570 Sum_probs=36.0
Q ss_pred EeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEe
Q psy14815 216 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 253 (479)
Q Consensus 216 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 253 (479)
+++.++.+|...|++++|+|++++|++++.|+.|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 46788999999999999999999999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=98.61 E-value=2e-05 Score=69.93 Aligned_cols=191 Identities=12% Similarity=0.025 Sum_probs=110.1
Q ss_pred CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccc-
Q psy14815 101 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI- 179 (479)
Q Consensus 101 ~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~- 179 (479)
++..+++++.++.+..||..+|+..-...+....... . ..++..+++++.++.+..+|..+++..-.........
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~--~--~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~ 110 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGA--P--VVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPA 110 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSG--E--EEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccce--e--eecccccccccceeeeEecccCCcceeeeecccccccc
Confidence 4667888889999999999999744333432211111 1 2245667777788899999988885432211111001
Q ss_pred cceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCcc------E-EEEEEccCCCEEEEeeCCCeEEEE
Q psy14815 180 QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST------V-WSLAFDRIGSRLATCSDDATVKIW 252 (479)
Q Consensus 180 ~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~------v-~~~~~~~~~~~l~s~~~dg~i~iw 252 (479)
...........++.++++..++.|..+|.++++..|........-... + ..+.+. ++ .++.++.++.+.-+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~v~~~~~~g~~~~~ 188 (238)
T PF13360_consen 111 GVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVIS-DG-RVYVSSGDGRVVAV 188 (238)
T ss_dssp STB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECC-TT-EEEEECCTSSEEEE
T ss_pred ccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEE-CC-EEEEEcCCCeEEEE
Confidence 111222233337888889889999999999888644332211111111 1 223333 34 77777777753333
Q ss_pred eccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 253 KEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 253 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
|+..+. .+-... ...+..+ ....+..|+.++.++.|..||+.+++
T Consensus 189 d~~tg~---------------~~w~~~---~~~~~~~-~~~~~~~l~~~~~~~~l~~~d~~tG~ 233 (238)
T PF13360_consen 189 DLATGE---------------KLWSKP---ISGIYSL-PSVDGGTLYVTSSDGRLYALDLKTGK 233 (238)
T ss_dssp ETTTTE---------------EEEEEC---SS-ECEC-EECCCTEEEEEETTTEEEEEETTTTE
T ss_pred ECCCCC---------------EEEEec---CCCccCC-ceeeCCEEEEEeCCCEEEEEECCCCC
Confidence 874442 121111 1122221 34567778888899999999999987
|
... |
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.8e-06 Score=82.52 Aligned_cols=158 Identities=19% Similarity=0.305 Sum_probs=105.1
Q ss_pred ccccccceEEEEECC-------------CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCC
Q psy14815 7 LKGHQGRVWNVSWNP-------------QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKE 73 (479)
Q Consensus 7 l~~h~~~V~~l~~s~-------------~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~ 73 (479)
|..|.+.|.-..+.- +|.+++|||.||+|.|-.+-+.+....+
T Consensus 54 ~GtH~g~v~~~~~~~~~~~~~~~s~~~~~Gey~asCS~DGkv~I~sl~~~~~~~~~------------------------ 109 (846)
T KOG2066|consen 54 LGTHRGAVYLTTCQGNPKTNFDHSSSILEGEYVASCSDDGKVVIGSLFTDDEITQY------------------------ 109 (846)
T ss_pred eccccceEEEEecCCcccccccccccccCCceEEEecCCCcEEEeeccCCccceeE------------------------
Confidence 345666666655543 4999999999999999987665544332
Q ss_pred CCCCceeeeEEeccccCCcEEEEEECCC-----CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCE
Q psy14815 74 SFGNKFTAKAILSDGHQRTIRETAWSPC-----GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 148 (479)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~-----~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~ 148 (479)
....++.+++++|+ .+.+++|+..| +.++.-+=-.......+....++|.++.|. |++
T Consensus 110 --------------df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~--g~l 172 (846)
T KOG2066|consen 110 --------------DFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWR--GNL 172 (846)
T ss_pred --------------ecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEec--CcE
Confidence 34578999999997 57899999888 777642211101122456677899999995 778
Q ss_pred EEEEeCCCcEEEEEeCCCCceeeeeeeeccccc------eeEEEEecCCCEEEEEEcCCcEEEEecCCc
Q psy14815 149 LATCSRDKSVWVWEVGEEDEYECAAVINAHIQD------VKKVRFHPFDNILASASYDDTVKLFKEDKA 211 (479)
Q Consensus 149 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~------v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~ 211 (479)
+|-++.+| |++||+...+... .+...... -..+.|.++. .|+.|- ..+|++..++.+
T Consensus 173 IAWand~G-v~vyd~~~~~~l~---~i~~p~~~~R~e~fpphl~W~~~~-~LVIGW-~d~v~i~~I~~~ 235 (846)
T KOG2066|consen 173 IAWANDDG-VKVYDTPTRQRLT---NIPPPSQSVRPELFPPHLHWQDED-RLVIGW-GDSVKICSIKKR 235 (846)
T ss_pred EEEecCCC-cEEEeccccceee---ccCCCCCCCCcccCCCceEecCCC-eEEEec-CCeEEEEEEecc
Confidence 88887766 8999998874322 22211122 2357777644 455554 447899888743
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.7e-06 Score=85.01 Aligned_cols=185 Identities=15% Similarity=0.159 Sum_probs=128.6
Q ss_pred ccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCC
Q psy14815 54 VETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGH 133 (479)
Q Consensus 54 ~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~ 133 (479)
....++.++-...+..+|+..... .... .-....|+-++. +++++.+|...|+|.+-|.++.+ .+.++..|
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e--~r~~---~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~--~iht~~aH 216 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKE--TRTT---NVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFE--TIHTFDAH 216 (1118)
T ss_pred CCcceeecchhhheeeeeccccee--eeee---eccCCceEEEEe--cCcEEEeecccceEEeecCCcCc--eeeeeecc
Confidence 444555555566666666663111 1111 111223555554 57899999999999999999886 78999999
Q ss_pred CCcEEEEEEcCCCCEEEEEeC---------CCcEEEEEeCCCCceeeeeeeeccccceeEEEEecC-CCEEEEEEcCCcE
Q psy14815 134 ENEVKSVTWSKNGQFLATCSR---------DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTV 203 (479)
Q Consensus 134 ~~~v~~l~~~~~~~~l~~~~~---------dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~~~dg~i 203 (479)
.+.+..+.. .|+.|++++. |.-|+|||+|..+.+.++.. +.++ .-+.|.|. ...+++++..|..
T Consensus 217 s~siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~---~~~P-~flrf~Psl~t~~~V~S~sGq~ 290 (1118)
T KOG1275|consen 217 SGSISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQF---PYGP-QFLRFHPSLTTRLAVTSQSGQF 290 (1118)
T ss_pred ccceeeeec--cCCeEEEeecccccccccccchhhhhhhhhhhccCCccc---ccCc-hhhhhcccccceEEEEecccce
Confidence 999987766 5888998875 45689999998754444432 2222 45778884 4678888999999
Q ss_pred EEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEe
Q psy14815 204 KLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 253 (479)
Q Consensus 204 ~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 253 (479)
.+-|..+-......+.......+.+..+.++++++.++.|..+|.|.+|.
T Consensus 291 q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 291 QFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred eeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 99993322211122334445566699999999999999999999999997
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.6e-05 Score=76.58 Aligned_cols=191 Identities=9% Similarity=0.086 Sum_probs=124.5
Q ss_pred EECCCCCeEEEeeCCCcEEEEecccccccccccC-----------CCccceEEEeecCC-----cEEEecCCCCCCce--
Q psy14815 18 SWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG-----------LPVETSLRQLVEDK-----NIRLWGKESFGNKF-- 79 (479)
Q Consensus 18 ~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~-----------~~~~~~~~~~~~~~-----~i~~w~~~~~~~~~-- 79 (479)
+|++.+..++.|+.+|.|.+.+-.- +.+..+.. ......+++.+.|. .+++|+++......
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln~s~-~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP 108 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILNSSF-QLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSP 108 (933)
T ss_pred EEcCCCceEEEeeccccEEEecccc-eeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCc
Confidence 4678889999999999998886321 11122222 22334566666554 48999998753221
Q ss_pred eee---EEe---ccccCCcEEEEEECCCCCEEEEEECCCeEEEEE--CCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEE
Q psy14815 80 TAK---AIL---SDGHQRTIRETAWSPCGNFIASASFDATTAVWD--KRSGQFECNATLEGHENEVKSVTWSKNGQFLAT 151 (479)
Q Consensus 80 ~~~---~~~---~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd--~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~ 151 (479)
.+. ... ..-...++.+++.+.+-+.+|+|-.+|.|..+. +...+.....-...-.++|+.+.+..++..++-
T Consensus 109 ~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lF 188 (933)
T KOG2114|consen 109 QCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLF 188 (933)
T ss_pred ceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEE
Confidence 221 111 112467899999999999999999999999984 221111112222234579999999998887333
Q ss_pred EeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcc
Q psy14815 152 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 212 (479)
Q Consensus 152 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~ 212 (479)
...-..|.+|.+.... .....+..|+.++.|..+++....+++++. ..+.+||....+
T Consensus 189 v~Tt~~V~~y~l~gr~--p~~~~ld~~G~~lnCss~~~~t~qfIca~~-e~l~fY~sd~~~ 246 (933)
T KOG2114|consen 189 VATTEQVMLYSLSGRT--PSLKVLDNNGISLNCSSFSDGTYQFICAGS-EFLYFYDSDGRG 246 (933)
T ss_pred EEecceeEEEEecCCC--cceeeeccCCccceeeecCCCCccEEEecC-ceEEEEcCCCcc
Confidence 3344679999998543 345557788889999999986654555543 469999887433
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=98.58 E-value=3.9e-05 Score=78.29 Aligned_cols=164 Identities=16% Similarity=0.293 Sum_probs=103.1
Q ss_pred ccCCcEEEEEECCCCCEEEEEECCCeEEEEECC----C-----------CeE------EEeEEEeCCC------------
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFDATTAVWDKR----S-----------GQF------ECNATLEGHE------------ 134 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~----~-----------~~~------~~~~~~~~~~------------ 134 (479)
.-...|.+++|+||++.++..+..+++.+-+.. . ++. .....+.+..
T Consensus 107 ~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~e 186 (1265)
T KOG1920|consen 107 NVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKE 186 (1265)
T ss_pred eccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhccccccccccccccceecccccceeeecchhhhccccccccc
Confidence 346799999999999999999888877765421 0 000 0011222111
Q ss_pred ---------CcEEEEEEcCCCCEEEEEe-----CCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEE--
Q psy14815 135 ---------NEVKSVTWSKNGQFLATCS-----RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-- 198 (479)
Q Consensus 135 ---------~~v~~l~~~~~~~~l~~~~-----~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-- 198 (479)
+.=++++|--||+++++.. ..+.|++||-+.. .... -......-.+++|-|.|..+++-.
T Consensus 187 k~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~drEg~--Lns~--se~~~~l~~~LsWkPsgs~iA~iq~~ 262 (1265)
T KOG1920|consen 187 KALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVYDREGA--LNST--SEPVEGLQHSLSWKPSGSLIAAIQCK 262 (1265)
T ss_pred ccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEecccch--hhcc--cCcccccccceeecCCCCeEeeeeec
Confidence 1124689999999999843 2378999998721 1111 111122345799999999888764
Q ss_pred -cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE---eeCCCeEEEEeccC
Q psy14815 199 -YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT---CSDDATVKIWKEYK 256 (479)
Q Consensus 199 -~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s---~~~dg~i~iwd~~~ 256 (479)
.|+.|.+|..+.-.. ......+.....+|..++|+.++..|++ ......|++|-+.+
T Consensus 263 ~sd~~IvffErNGL~h-g~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~N 323 (1265)
T KOG1920|consen 263 TSDSDIVFFERNGLRH-GEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGN 323 (1265)
T ss_pred CCCCcEEEEecCCccc-cccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecC
Confidence 456798987654321 1112222333445899999999999887 55555699997643
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=98.52 E-value=6.8e-06 Score=73.56 Aligned_cols=250 Identities=14% Similarity=0.118 Sum_probs=138.3
Q ss_pred cccccccccccceEEEEECCCCC-eEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~-~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
...+.+.+|...|..++|||..+ ++..++.+.+|+|.|+++......+
T Consensus 184 kssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy------------------------------- 232 (463)
T KOG1645|consen 184 KSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSY------------------------------- 232 (463)
T ss_pred chhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeehe-------------------------------
Confidence 44556778899999999999777 7888999999999999876655443
Q ss_pred eeEEeccccCCcEEEEEECCCC-CEEEEEECCCeEEEEECCCCeEEEeEEEeC--CCCcEEEEEEcC------CCCEEEE
Q psy14815 81 AKAILSDGHQRTIRETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEG--HENEVKSVTWSK------NGQFLAT 151 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~v~~l~~~~------~~~~l~~ 151 (479)
..+ ..+++++|.-+. +++..|-..|.|.|||++..+- ....+.+ ...+|..++.-+ .+.+++.
T Consensus 233 ------~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~~-~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~ 304 (463)
T KOG1645|consen 233 ------IAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPEG-PLMELVANVTINPVHKIAPVQPNKIFTSGGLLVF 304 (463)
T ss_pred ------ecc-CCceeeeeccCCcceeEEeccCceEEEEEccCCCc-hHhhhhhhhccCcceeecccCccccccccceEEe
Confidence 223 789999998754 6777888899999999987541 1222211 223444444332 2333333
Q ss_pred EeCCCcEEEEEeCCCCc-eeeeeeeeccccceeEEEEecCCCEEEEEEcC-C------cEEE-EecCCcccceEeeeeec
Q psy14815 152 CSRDKSVWVWEVGEEDE-YECAAVINAHIQDVKKVRFHPFDNILASASYD-D------TVKL-FKEDKAEADWINFATLK 222 (479)
Q Consensus 152 ~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-g------~i~i-~d~~~~~~~~~~~~~~~ 222 (479)
.+. ....|++..... +.++..+ ...+.+.++.+.+..+.++..... . .|.. -|.+.+...+ ....
T Consensus 305 ~lt--~l~f~ei~~s~~~~p~vlel-e~pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc---~~r~ 378 (463)
T KOG1645|consen 305 ALT--VLQFYEIVFSAECLPCVLEL-EPPGICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVC---GKRR 378 (463)
T ss_pred eeh--hhhhhhhhccccCCCccccc-CCCcceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCceee---eecc
Confidence 332 245566544321 1221222 234556667777654544443322 1 1111 1111111110 1111
Q ss_pred CC-CccE------EEEEEccCCCEEE-EeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCC
Q psy14815 223 SH-TSTV------WSLAFDRIGSRLA-TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL 294 (479)
Q Consensus 223 ~~-~~~v------~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~ 294 (479)
.+ .+.- ..+.-.++.++++ .+...+.+.+||.... ..+.++.- ..+|.+++....
T Consensus 379 ~~~Gs~~~kl~t~~ai~~~~~nn~iv~~gd~tn~lil~D~~s~---------------evvQ~l~~--~epv~Dicp~~~ 441 (463)
T KOG1645|consen 379 TYFGSKQTKLSTTQAIRAVEDNNYIVVVGDSTNELILQDPHSF---------------EVVQTLAL--SEPVLDICPNDT 441 (463)
T ss_pred cccCCcccccccccceeccccccEEEEecCCcceeEEeccchh---------------heeeeccc--Ccceeecceeec
Confidence 11 1100 1111134445554 4555678999998544 34445544 467887776542
Q ss_pred --CCeEEEEeCCCeEEEcccCC
Q psy14815 295 --TDLIATACGDDAIRIFKENP 314 (479)
Q Consensus 295 --~~~l~~~~~dg~i~vw~~~~ 314 (479)
+.+|++-. |..++||..++
T Consensus 442 n~~syLa~LT-d~~v~Iyk~es 462 (463)
T KOG1645|consen 442 NGSSYLALLT-DDRVHIYKNES 462 (463)
T ss_pred CCcchhhhee-cceEEEEecCC
Confidence 44666554 56888886543
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=98.48 E-value=1e-05 Score=72.43 Aligned_cols=152 Identities=16% Similarity=0.204 Sum_probs=99.2
Q ss_pred eccccCCcEEEEEECCCCC-EEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEE
Q psy14815 85 LSDGHQRTIRETAWSPCGN-FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWE 162 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~vwd 162 (479)
...++...|..++|+|..+ ++..++.+.+|+|.|+++.. .+..+..+ ..+++++|.-|. ++++.|..+|.|.+||
T Consensus 188 ~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~--~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD 264 (463)
T KOG1645|consen 188 ILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSC--VVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYD 264 (463)
T ss_pred cccccchhhhhhccCccccceeeeeccCceEEEEecccce--eeeheecc-CCceeeeeccCCcceeEEeccCceEEEEE
Confidence 3467889999999999766 78889999999999999985 55666666 789999998754 5788888899999999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEe------cCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFH------PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 236 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~------~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 236 (479)
++..+.......-.....+|..++.- +.+.+|+....+ ...|........+.++..+. ..+...++++.+.
T Consensus 265 ~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~~~p~vlele-~pG~cismqy~~~ 341 (463)
T KOG1645|consen 265 MRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAECLPCVLELE-PPGICISMQYHGV 341 (463)
T ss_pred ccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeehh--hhhhhhhccccCCCcccccC-CCcceeeeeecCc
Confidence 99875322221111123344444432 234445444433 56676654443333333332 3455666777665
Q ss_pred CCEEEE
Q psy14815 237 GSRLAT 242 (479)
Q Consensus 237 ~~~l~s 242 (479)
.++++.
T Consensus 342 snh~l~ 347 (463)
T KOG1645|consen 342 SNHLLL 347 (463)
T ss_pred cceEEE
Confidence 555543
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.46 E-value=2e-05 Score=74.62 Aligned_cols=144 Identities=10% Similarity=0.151 Sum_probs=92.5
Q ss_pred eEEEEec-CCCEEEEEE----cCCc----EEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEe
Q psy14815 183 KKVRFHP-FDNILASAS----YDDT----VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 253 (479)
Q Consensus 183 ~~l~~~~-~~~~l~~~~----~dg~----i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 253 (479)
.++.|+. +.+.+.+.. .+|. -.+|++...+.....+..+ ...+.|.+++++|+.+.++.|+.||.|.+||
T Consensus 209 l~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsi-pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD 287 (545)
T PF11768_consen 209 LDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSI-PLPSQVICCARSPSEDKLVLGCEDGSIILYD 287 (545)
T ss_pred EEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEE-ecCCcceEEecCcccceEEEEecCCeEEEEE
Confidence 4556665 334444332 2333 3567766544332223333 5778899999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC--------CCCCceeeE
Q psy14815 254 EYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA--------GDSDMVSFD 325 (479)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~--------~~~~~~~~~ 325 (479)
..... ..+... .-..+.++|+|+|.++++|+..|.+.+||+.-.. +..+....+
T Consensus 288 ~~~~~-----------------t~~~ka-~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALspi~~qLlsEd~~P~~~L~ 349 (545)
T PF11768_consen 288 TTRGV-----------------TLLAKA-EFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSPIKMQLLSEDATPKSTLQ 349 (545)
T ss_pred cCCCe-----------------eeeeee-cccceEEEEcCCCcEEEEEcCCceEEEEEeecCccceeeccccCCCccEEe
Confidence 74431 112222 4567899999999999999999999999987543 111112222
Q ss_pred EEeccccccccceeEEEecCCC
Q psy14815 326 LVHTEHRAHNQDVNCVAWNPVV 347 (479)
Q Consensus 326 ~~~~~~~~h~~~v~~~~~sp~~ 347 (479)
+. .+..+......+.|++..
T Consensus 350 Ls--~yf~~~~~L~~iqW~~~~ 369 (545)
T PF11768_consen 350 LS--KYFRVSSSLVHIQWAPAP 369 (545)
T ss_pred ee--hhccCcchhheeEeccCC
Confidence 22 222455667778888544
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=98.44 E-value=5e-05 Score=77.51 Aligned_cols=206 Identities=11% Similarity=0.190 Sum_probs=133.9
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeC----
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG---- 164 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~---- 164 (479)
....|.++.|..++..++.+..+|.|.+-|.++...+.... -...|.+++|+||++.++..+..+++.+-+-.
T Consensus 67 gd~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~eivg~---vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i 143 (1265)
T KOG1920|consen 67 GDDEIVSVQFLADTNSICVITALGDIILVDPETLELEIVGN---VDNGISAASWSPDEELLALITGRQTLLFMTKDFEPI 143 (1265)
T ss_pred CCcceEEEEEecccceEEEEecCCcEEEEcccccceeeeee---ccCceEEEeecCCCcEEEEEeCCcEEEEEeccccch
Confidence 34789999999999999999999999999999886554443 34689999999999999998888877664321
Q ss_pred CCCce--------ee--------eeeeecc---------------------ccceeEEEEecCCCEEEEEE-----cCCc
Q psy14815 165 EEDEY--------EC--------AAVINAH---------------------IQDVKKVRFHPFDNILASAS-----YDDT 202 (479)
Q Consensus 165 ~~~~~--------~~--------~~~~~~~---------------------~~~v~~l~~~~~~~~l~~~~-----~dg~ 202 (479)
..+.. +. ...+.+. .+.-++++|--||.++++.. ..+.
T Consensus 144 ~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~Rk 223 (1265)
T KOG1920|consen 144 AEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRK 223 (1265)
T ss_pred hccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCcee
Confidence 00000 00 0011110 11124588999999998843 2378
Q ss_pred EEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee---CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEe
Q psy14815 203 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS---DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS 279 (479)
Q Consensus 203 i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (479)
|++||.+ +.. -..-....+.-.+++|-|.|..+++-. .|+.|.+|.-+-... .. ....+.
T Consensus 224 irV~drE-g~L----ns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~h-g~-----------f~l~~p 286 (1265)
T KOG1920|consen 224 IRVYDRE-GAL----NSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRH-GE-----------FVLPFP 286 (1265)
T ss_pred EEEeccc-chh----hcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccc-cc-----------cccCCc
Confidence 9999987 321 111112233345799999999988753 456788886322111 00 011111
Q ss_pred ccccccEEEEEecCCCCeEEE---EeCCCeEEEcccCCC
Q psy14815 280 GHHGRTIYDISWCHLTDLIAT---ACGDDAIRIFKENPE 315 (479)
Q Consensus 280 ~~~~~~i~~l~~~~~~~~l~~---~~~dg~i~vw~~~~~ 315 (479)
. ...++..++|+.++..|++ ......|++|-+..-
T Consensus 287 ~-de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Ny 324 (1265)
T KOG1920|consen 287 L-DEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNY 324 (1265)
T ss_pred c-cccchheeeecCCCCceeeeecccccceEEEEEecCe
Confidence 1 1334899999999999988 444556999977654
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=0.0002 Score=68.74 Aligned_cols=254 Identities=8% Similarity=-0.011 Sum_probs=143.5
Q ss_pred CCeEEEeeCCCcEEEEecccccccccccCCC--------ccceEEEeecCCcEEEecCCCCCCceeeeEEec----cccC
Q psy14815 23 GTMISSCGEDKNIRLWVMVIREPYEKLHGLP--------VETSLRQLVEDKNIRLWGKESFGNKFTAKAILS----DGHQ 90 (479)
Q Consensus 23 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~--------~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~----~~~~ 90 (479)
+..++.++.+|.+.-+|.++|+.+.+..... .+..++....++.+..+|.++....+....... .+..
T Consensus 120 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ssP~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~ 199 (394)
T PRK11138 120 GGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEALSRPVVSDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGES 199 (394)
T ss_pred CCEEEEEcCCCEEEEEECCCCCCcccccCCCceecCCEEECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCC
Confidence 4566777789999999999998876654321 123455556677788888776554444322100 0011
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCC-----cEEEEEEcC--CCCEEEEEeCCCcEEEEEe
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHEN-----EVKSVTWSK--NGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~-----~v~~l~~~~--~~~~l~~~~~dg~i~vwd~ 163 (479)
.++. .+..++.++.+|.+..+|..+|+..-...+..... ....+.-+| .+..++.++.+|.+..+|.
T Consensus 200 sP~v------~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~ 273 (394)
T PRK11138 200 APAT------AFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDL 273 (394)
T ss_pred CCEE------ECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEEC
Confidence 1111 13457777888999999999886322222111000 011111222 3456777888999999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
.+++..-.. .+ .....+.. .+..++.++.+|.+..+|..+++..|.... + .+ ....+... .+..++.+
T Consensus 274 ~tG~~~W~~-~~----~~~~~~~~--~~~~vy~~~~~g~l~ald~~tG~~~W~~~~-~-~~-~~~~sp~v--~~g~l~v~ 341 (394)
T PRK11138 274 RSGQIVWKR-EY----GSVNDFAV--DGGRIYLVDQNDRVYALDTRGGVELWSQSD-L-LH-RLLTAPVL--YNGYLVVG 341 (394)
T ss_pred CCCCEEEee-cC----CCccCcEE--ECCEEEEEcCCCeEEEEECCCCcEEEcccc-c-CC-CcccCCEE--ECCEEEEE
Confidence 987532111 11 11111222 356788888999999999988775442211 1 11 11122222 25678889
Q ss_pred eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEE-EEecCCCCeEEEEeCCCeEEEccc
Q psy14815 244 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYD-ISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 244 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
+.||.+...|..++ +.+.+.+.. ...+.+ ..+ .+..|+.++.||.++.++.
T Consensus 342 ~~~G~l~~ld~~tG---------------~~~~~~~~~-~~~~~s~P~~--~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 342 DSEGYLHWINREDG---------------RFVAQQKVD-SSGFLSEPVV--ADDKLLIQARDGTVYAITR 393 (394)
T ss_pred eCCCEEEEEECCCC---------------CEEEEEEcC-CCcceeCCEE--ECCEEEEEeCCceEEEEeC
Confidence 99999999997544 223333221 112221 111 2447888899999887754
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=0.00035 Score=67.10 Aligned_cols=260 Identities=7% Similarity=-0.005 Sum_probs=146.7
Q ss_pred CCCeEEEeeCCCcEEEEecccccccccccCCC-------------------ccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 22 QGTMISSCGEDKNIRLWVMVIREPYEKLHGLP-------------------VETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 22 ~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
.+..+++++.+|.+.-+|.++|+.+-+..... .+..++....++.+..+|.++....+...
T Consensus 68 ~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~ 147 (394)
T PRK11138 68 AYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSEKGQVYALNAEDGEVAWQTK 147 (394)
T ss_pred ECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcCCCEEEEEECCCCCCccccc
Confidence 35577777788899999998888765543221 13345556677888888887655555433
Q ss_pred EEeccccCCcEEE-EEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEE-EEEEcC--CCCEEEEEeCCCcE
Q psy14815 83 AILSDGHQRTIRE-TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVK-SVTWSK--NGQFLATCSRDKSV 158 (479)
Q Consensus 83 ~~~~~~~~~~v~~-v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~-~l~~~~--~~~~l~~~~~dg~i 158 (479)
. ...+.+ ... .+..++.++.++.+..+|.++|+. +........... ...-+| .+..++.++.+|.+
T Consensus 148 ~------~~~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~--~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g~v 217 (394)
T PRK11138 148 V------AGEALSRPVV--SDGLVLVHTSNGMLQALNESDGAV--KWTVNLDVPSLTLRGESAPATAFGGAIVGGDNGRV 217 (394)
T ss_pred C------CCceecCCEE--ECCEEEEECCCCEEEEEEccCCCE--eeeecCCCCcccccCCCCCEEECCEEEEEcCCCEE
Confidence 2 111111 111 245677788889999999999973 333332111000 000111 23457778889999
Q ss_pred EEEEeCCCCceeeeeeeeccc-c---ceeEEEEec--CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEE
Q psy14815 159 WVWEVGEEDEYECAAVINAHI-Q---DVKKVRFHP--FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLA 232 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~~~-~---~v~~l~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 232 (479)
..+|..+++..-......... . ....+..+| .+..++.++.+|.+..+|..+++..|... +. ....+.
T Consensus 218 ~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~--~~----~~~~~~ 291 (394)
T PRK11138 218 SAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKRE--YG----SVNDFA 291 (394)
T ss_pred EEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeec--CC----CccCcE
Confidence 999988774321111100000 0 011111222 24567778889999999999887644321 11 111222
Q ss_pred EccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 233 FDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 233 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
. .+..++.++.+|.+..+|...+... |+.. ... .....+... .+.+++.++.||.+.+.|.
T Consensus 292 ~--~~~~vy~~~~~g~l~ald~~tG~~~-----------W~~~-~~~---~~~~~sp~v--~~g~l~v~~~~G~l~~ld~ 352 (394)
T PRK11138 292 V--DGGRIYLVDQNDRVYALDTRGGVEL-----------WSQS-DLL---HRLLTAPVL--YNGYLVVGDSEGYLHWINR 352 (394)
T ss_pred E--ECCEEEEEcCCCeEEEEECCCCcEE-----------Eccc-ccC---CCcccCCEE--ECCEEEEEeCCCEEEEEEC
Confidence 2 3667888888999999998554321 1100 000 001111111 2457788899999999999
Q ss_pred CCCC
Q psy14815 313 NPEA 316 (479)
Q Consensus 313 ~~~~ 316 (479)
.+++
T Consensus 353 ~tG~ 356 (394)
T PRK11138 353 EDGR 356 (394)
T ss_pred CCCC
Confidence 8887
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.36 E-value=0.00032 Score=66.18 Aligned_cols=234 Identities=18% Similarity=0.189 Sum_probs=120.6
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCC----------------CCcEEEEEEcCCCCEEEEEe
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGH----------------ENEVKSVTWSKNGQFLATCS 153 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~----------------~~~v~~l~~~~~~~~l~~~~ 153 (479)
...+....|||+|+.++... ++.|.+++..+++...+ +..+. -+.-..+-||||+++|+...
T Consensus 42 ~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~l-T~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~ 119 (353)
T PF00930_consen 42 PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQL-TTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLR 119 (353)
T ss_dssp ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEES-ES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEE
T ss_pred ccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEe-ccccceeEEcCccceeccccccccccceEECCCCCEEEEEE
Confidence 56788899999999999987 57899999888753322 22220 01235788999999888765
Q ss_pred CC-Cc-----------------------------------EEEEEeCCCCceeeeeee---eccccceeEEEEecCCCEE
Q psy14815 154 RD-KS-----------------------------------VWVWEVGEEDEYECAAVI---NAHIQDVKKVRFHPFDNIL 194 (479)
Q Consensus 154 ~d-g~-----------------------------------i~vwd~~~~~~~~~~~~~---~~~~~~v~~l~~~~~~~~l 194 (479)
.| .. +.++|+.+++.. .+... .....-+..+.|.++++.|
T Consensus 120 ~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~-~~~~~~~~~~~~~yl~~v~W~~d~~~l 198 (353)
T PF00930_consen 120 FDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTT-ELDPPNSLNPQDYYLTRVGWSPDGKRL 198 (353)
T ss_dssp EE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCC-EE---HHHHTSSEEEEEEEEEETTEEE
T ss_pred ECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEE-EeeeccccCCCccCcccceecCCCcEE
Confidence 43 22 233344333211 01111 1223447788999988844
Q ss_pred EEEE--cCC---cEEEEecCCcccceEeeeeecCCCccEEEEEEc-cCCC-EEEEeeCCCeEEEEeccCCCCCCCCCCCC
Q psy14815 195 ASAS--YDD---TVKLFKEDKAEADWINFATLKSHTSTVWSLAFD-RIGS-RLATCSDDATVKIWKEYKPGNSAGIPTPD 267 (479)
Q Consensus 195 ~~~~--~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 267 (479)
+..- .+. .+.++|..++...........+--..-....|. +++. ++.....||.-+||-+.....
T Consensus 199 ~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~-------- 270 (353)
T PF00930_consen 199 WVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGG-------- 270 (353)
T ss_dssp EEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSS--------
T ss_pred EEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEccccc--------
Confidence 4433 222 366677776554322211111111222344544 5554 445555778666665543322
Q ss_pred CCCceEEEEEEeccccccEEE-EEecCCCCeE-EEEeCC--CeEEEc--ccC-CCCCCCCceeeEEEeccccccccceeE
Q psy14815 268 NDSVWKCVCTLSGHHGRTIYD-ISWCHLTDLI-ATACGD--DAIRIF--KEN-PEAGDSDMVSFDLVHTEHRAHNQDVNC 340 (479)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~i~~-l~~~~~~~~l-~~~~~d--g~i~vw--~~~-~~~~~~~~~~~~~~~~~~~~h~~~v~~ 340 (479)
....+... .-.|.. +.|+++++.| +++..+ +.-.+| ++. .+. ..++......| ..
T Consensus 271 ------~~~~lT~G-~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~-------~~~LT~~~~~~----~~ 332 (353)
T PF00930_consen 271 ------KPRQLTSG-DWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGE-------PKCLTCEDGDH----YS 332 (353)
T ss_dssp ------EEEESS-S-SS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTE-------EEESSTTSSTT----EE
T ss_pred ------ceeccccC-ceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCC-------eEeccCCCCCc----eE
Confidence 12233332 445644 6778876644 344442 234444 444 332 11222221122 68
Q ss_pred EEecCCCCCCCc
Q psy14815 341 VAWNPVVPEPQK 352 (479)
Q Consensus 341 ~~~sp~~~~l~~ 352 (479)
+.|||+++++..
T Consensus 333 ~~~Spdg~y~v~ 344 (353)
T PF00930_consen 333 ASFSPDGKYYVD 344 (353)
T ss_dssp EEE-TTSSEEEE
T ss_pred EEECCCCCEEEE
Confidence 999999998754
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=98.31 E-value=0.00027 Score=62.67 Aligned_cols=184 Identities=10% Similarity=0.010 Sum_probs=113.2
Q ss_pred CCCeEEEeeCCCcEEEEecccccccccccCC--------CccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcE
Q psy14815 22 QGTMISSCGEDKNIRLWVMVIREPYEKLHGL--------PVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 93 (479)
Q Consensus 22 ~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~--------~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v 93 (479)
++..+++++.++.+..||..+|+.+..+... ..+..++....++.+..+|..+....+........... ..
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~-~~ 113 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGAPVVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAG-VR 113 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSGEEEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCS-TB
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccceeeecccccccccceeeeEecccCCcceeeeeccccccccc-cc
Confidence 5667888889999999999999887665432 13445666667888999997765555542221111111 11
Q ss_pred EEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCc----------EEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 94 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE----------VKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 94 ~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~----------v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
.......++..++.+..++.|..+|+++|+.. ......... +.+-....++ .++.++.++.+..+|+
T Consensus 114 ~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~--w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~ 190 (238)
T PF13360_consen 114 SSSSPAVDGDRLYVGTSSGKLVALDPKTGKLL--WKYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAVDL 190 (238)
T ss_dssp --SEEEEETTEEEEEETCSEEEEEETTTTEEE--EEEESSTT-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEEET
T ss_pred cccCceEecCEEEEEeccCcEEEEecCCCcEE--EEeecCCCCCCcceeeecccccceEEECC-EEEEEcCCCeEEEEEC
Confidence 12222223778899988999999999999843 333332211 1122222244 7777777886444499
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccce
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 215 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 215 (479)
.+++. ..... ...+..+ ....+..|+.++.++.+..||+++++..|
T Consensus 191 ~tg~~---~w~~~--~~~~~~~-~~~~~~~l~~~~~~~~l~~~d~~tG~~~W 236 (238)
T PF13360_consen 191 ATGEK---LWSKP--ISGIYSL-PSVDGGTLYVTSSDGRLYALDLKTGKVVW 236 (238)
T ss_dssp TTTEE---EEEEC--SS-ECEC-EECCCTEEEEEETTTEEEEEETTTTEEEE
T ss_pred CCCCE---EEEec--CCCccCC-ceeeCCEEEEEeCCCEEEEEECCCCCEEe
Confidence 88742 21111 1222221 34567788888899999999999987644
|
... |
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=98.29 E-value=6.5e-05 Score=72.41 Aligned_cols=143 Identities=13% Similarity=0.126 Sum_probs=99.9
Q ss_pred cccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
|...|.--+++..+++++.|+..|.+.+|+-..++....- ..+.
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~------------------------------------~~~~ 75 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLK------------------------------------NEGA 75 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecCchhhhccc------------------------------------ccCc
Confidence 4455666677778999999999999999986554432210 1223
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEE---eEEE-eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCC
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFEC---NATL-EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~---~~~~-~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~ 165 (479)
...+..+..+++..++|.|+..|.|.++-+..+.... ...+ +.|...|++++|++++..+++|...|.|..-.+..
T Consensus 76 ~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 76 TGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred cceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 4566677788888899999999999999877643211 1111 23678999999999999999999999999988876
Q ss_pred C-CceeeeeeeeccccceeEEEEe
Q psy14815 166 E-DEYECAAVINAHIQDVKKVRFH 188 (479)
Q Consensus 166 ~-~~~~~~~~~~~~~~~v~~l~~~ 188 (479)
. .-....+.+..-.+.|-.+.+.
T Consensus 156 ~~~~~~~~q~il~~ds~IVQlD~~ 179 (726)
T KOG3621|consen 156 RQAFLSKSQEILSEDSEIVQLDYL 179 (726)
T ss_pred hhhhccccceeeccCcceEEeecc
Confidence 2 1111223333445667667665
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=98.28 E-value=0.00048 Score=65.10 Aligned_cols=207 Identities=14% Similarity=0.092 Sum_probs=115.6
Q ss_pred cEEEEEECCCCCEEEEEECCCeEEEEECCCCe-----------------------------------------EEEeEEE
Q psy14815 92 TIRETAWSPCGNFIASASFDATTAVWDKRSGQ-----------------------------------------FECNATL 130 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~-----------------------------------------~~~~~~~ 130 (479)
.|+.+.|.++..-|++|...|.|.||.....+ +.+...+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 57889999998899999999999998653221 1122233
Q ss_pred eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeec------cccceeEEEEec-----CC---CEEEE
Q psy14815 131 EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA------HIQDVKKVRFHP-----FD---NILAS 196 (479)
Q Consensus 131 ~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~------~~~~v~~l~~~~-----~~---~~l~~ 196 (479)
+...++|++++.| |=-+++.|..+|.+.+.|+|....+.. ..+.. ....++++.|.- |+ -.+++
T Consensus 83 ~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~-~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~v 160 (395)
T PF08596_consen 83 DAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYN-ENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLV 160 (395)
T ss_dssp ---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEE-EEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEE
T ss_pred eccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEee-ccccccccccccccCeeEEEEEEEecCCCcccceEEEE
Confidence 4456889999997 445899999999999999988732211 11222 234577888862 22 57899
Q ss_pred EEcCCcEEEEecCC-cccceE--eeeeecCCCccEEEEE-EccCC--------------------CEEEEeeCCCeEEEE
Q psy14815 197 ASYDDTVKLFKEDK-AEADWI--NFATLKSHTSTVWSLA-FDRIG--------------------SRLATCSDDATVKIW 252 (479)
Q Consensus 197 ~~~dg~i~i~d~~~-~~~~~~--~~~~~~~~~~~v~~~~-~~~~~--------------------~~l~s~~~dg~i~iw 252 (479)
|+..|.+.+|.+.- ....+. .......+.++|..+. ++.+. ..++....+..++++
T Consensus 161 GTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~ 240 (395)
T PF08596_consen 161 GTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVF 240 (395)
T ss_dssp EETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE
T ss_pred EeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEE
Confidence 99999999998852 222222 1222234666666655 32221 123334446779999
Q ss_pred eccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec-----CCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 253 KEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC-----HLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 253 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~-----~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
...+. +........ ......+.+- ..+..|++-..+|.+++|.+..-+
T Consensus 241 ~~~~~---------------k~~~K~~~~-~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lk 293 (395)
T PF08596_consen 241 KPPKS---------------KGAHKSFDD-PFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLK 293 (395)
T ss_dssp -TT------------------EEEEE-SS--EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--
T ss_pred eCCCC---------------cccceeecc-ccccceEEEEeecccCCceEEEEEECCCcEEEEECCCch
Confidence 86332 222222211 1222333442 345678888899999999998866
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=98.21 E-value=0.0032 Score=58.59 Aligned_cols=195 Identities=13% Similarity=0.120 Sum_probs=113.0
Q ss_pred CCEEEEEEC---------C-CeEEEEECCCC-----eEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCC
Q psy14815 102 GNFIASASF---------D-ATTAVWDKRSG-----QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 166 (479)
Q Consensus 102 ~~~l~t~~~---------d-g~i~iwd~~~~-----~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~ 166 (479)
..+++.|+. . |.|.++++... +...+.... ..++|++++-- ++ .|+++ .++.|.+|++...
T Consensus 42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~-~~g~V~ai~~~-~~-~lv~~-~g~~l~v~~l~~~ 117 (321)
T PF03178_consen 42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTE-VKGPVTAICSF-NG-RLVVA-VGNKLYVYDLDNS 117 (321)
T ss_dssp SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEE-ESS-EEEEEEE-TT-EEEEE-ETTEEEEEEEETT
T ss_pred cCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEe-ecCcceEhhhh-CC-EEEEe-ecCEEEEEEccCc
Confidence 467777754 2 89999999884 444443333 46789998876 34 44444 4589999999987
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCC
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD 246 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 246 (479)
+.+........ ...+.++... +++++.|.....+.++..+........+. .......++++.|-++++.++.+..+
T Consensus 118 ~~l~~~~~~~~-~~~i~sl~~~--~~~I~vgD~~~sv~~~~~~~~~~~l~~va-~d~~~~~v~~~~~l~d~~~~i~~D~~ 193 (321)
T PF03178_consen 118 KTLLKKAFYDS-PFYITSLSVF--KNYILVGDAMKSVSLLRYDEENNKLILVA-RDYQPRWVTAAEFLVDEDTIIVGDKD 193 (321)
T ss_dssp SSEEEEEEE-B-SSSEEEEEEE--TTEEEEEESSSSEEEEEEETTTE-EEEEE-EESS-BEEEEEEEE-SSSEEEEEETT
T ss_pred ccchhhheecc-eEEEEEEecc--ccEEEEEEcccCEEEEEEEccCCEEEEEE-ecCCCccEEEEEEecCCcEEEEEcCC
Confidence 52333322222 2245555554 67999999888898886554222122222 23345678899988666799999999
Q ss_pred CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEE---EecCC--CC------eEEEEeCCCeEEEc
Q psy14815 247 ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI---SWCHL--TD------LIATACGDDAIRIF 310 (479)
Q Consensus 247 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l---~~~~~--~~------~l~~~~~dg~i~vw 310 (479)
|.+.++.......... ... .+......-|.+..|+++ ++.|. +. .++.++.+|.|.+.
T Consensus 194 gnl~~l~~~~~~~~~~-----~~~-~~L~~~~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l 262 (321)
T PF03178_consen 194 GNLFVLRYNPEIPNSR-----DGD-PKLERISSFHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL 262 (321)
T ss_dssp SEEEEEEE-SS-SSTT-----TTT-TBEEEEEEEE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred CeEEEEEECCCCcccc-----ccc-ccceeEEEEECCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence 9999998853221110 001 022233333346678887 55552 22 37777788887743
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.00047 Score=67.25 Aligned_cols=151 Identities=13% Similarity=0.099 Sum_probs=91.1
Q ss_pred CCCCCEEEE-EECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-----------------------
Q psy14815 99 SPCGNFIAS-ASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR----------------------- 154 (479)
Q Consensus 99 ~~~~~~l~t-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~----------------------- 154 (479)
+|||+.+.. .-..+.+.+.|.++.+. ..++.- .+....+.++++|+++++.+.
T Consensus 201 pnDGk~l~~~~ey~~~vSvID~etmeV--~~qV~V-dgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfn 277 (635)
T PRK02888 201 PNDGKDLDDPKKYRSLFTAVDAETMEV--AWQVMV-DGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFN 277 (635)
T ss_pred CCCCCEeecccceeEEEEEEECccceE--EEEEEe-CCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEc
Confidence 345544422 22345677778777652 233221 123456678888888777751
Q ss_pred -----------------CCcEEEEEeCC----CCceeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcc
Q psy14815 155 -----------------DKSVWVWEVGE----EDEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAE 212 (479)
Q Consensus 155 -----------------dg~i~vwd~~~----~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~ 212 (479)
++.|.+.|.++ .. .....+. -......+.++|||+++++++ .+.+|.++|+.+.+
T Consensus 278 i~~iea~vkdGK~~~V~gn~V~VID~~t~~~~~~--~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k 354 (635)
T PRK02888 278 IARIEEAVKAGKFKTIGGSKVPVVDGRKAANAGS--ALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLD 354 (635)
T ss_pred hHHHHHhhhCCCEEEECCCEEEEEECCccccCCc--ceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhh
Confidence 13366666554 11 1222222 234457899999999877766 58899999998754
Q ss_pred cce--------EeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccC
Q psy14815 213 ADW--------INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 256 (479)
Q Consensus 213 ~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 256 (479)
..+ ....+..- ...-...+|+++|....|..-|..|..||+..
T Consensus 355 ~~~~~~~~~~~~vvaevev-GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 355 DLFDGKIKPRDAVVAEPEL-GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred hhhhccCCccceEEEeecc-CCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence 210 11222222 22334678999998888889999999999865
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=98.16 E-value=2.2e-05 Score=75.56 Aligned_cols=145 Identities=16% Similarity=0.137 Sum_probs=105.1
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 168 (479)
+...|.--++...+++++.|+.-|.+.+|+-..+.. .+....+..+.+..+..+++..+++.|+..|.|.++-+.....
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~-~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p 110 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEM-RKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELP 110 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecCchhh-hcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCC
Confidence 455566666777889999999999999999887753 2334444556677888899999999999999999998876432
Q ss_pred eeeeee---eeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEc
Q psy14815 169 YECAAV---INAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD 234 (479)
Q Consensus 169 ~~~~~~---~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~ 234 (479)
...... -..|+..|++++|++++..+.+|...|+|..-.+.....-......+..-.+.|..+.+.
T Consensus 111 ~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~ 179 (726)
T KOG3621|consen 111 RDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYL 179 (726)
T ss_pred CcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecc
Confidence 222211 123678899999999999999999999999988876221112233344456677666665
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=98.15 E-value=0.0029 Score=55.56 Aligned_cols=207 Identities=11% Similarity=0.142 Sum_probs=110.7
Q ss_pred ccccccccceEEEEECCCCC-eEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 5 QTLKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~-~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+.+.+-...+..++|+|+.+ ++++....+.|...+. +|+.+.++.
T Consensus 15 ~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~--------------------------------- 60 (248)
T PF06977_consen 15 KPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIP--------------------------------- 60 (248)
T ss_dssp EE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE---------------------------------
T ss_pred eECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEe---------------------------------
Confidence 45666667799999999866 4555556777766665 344443331
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCe----EEEeEEE----e-CCCCcEEEEEEcCCCCEEEEEeC
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ----FECNATL----E-GHENEVKSVTWSKNGQFLATCSR 154 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~----~~~~~~~----~-~~~~~v~~l~~~~~~~~l~~~~~ 154 (479)
..-....-.|++..++.++++--.++.+.++++.... ......+ . .++..+-.++|++.++.|+++-.
T Consensus 61 ---l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE 137 (248)
T PF06977_consen 61 ---LDGFGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKE 137 (248)
T ss_dssp ----SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEE
T ss_pred ---CCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeC
Confidence 1123567778888777666666568899998873321 1111111 1 34456899999998888888877
Q ss_pred CCcEEEEEeCC---CCceeeeee-----eeccccceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEeeeeecC--
Q psy14815 155 DKSVWVWEVGE---EDEYECAAV-----INAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLKS-- 223 (479)
Q Consensus 155 dg~i~vwd~~~---~~~~~~~~~-----~~~~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-- 223 (479)
..-..+|.++. ......... .......+++++++|. +++++....+..|..+|.. ++. .....+..
T Consensus 138 ~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d~~-G~~--~~~~~L~~g~ 214 (248)
T PF06977_consen 138 RKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELDRQ-GRV--VSSLSLDRGF 214 (248)
T ss_dssp SSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE-TT---E--EEEEE-STTG
T ss_pred CCChhhEEEccccCccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEECCC-CCE--EEEEEeCCcc
Confidence 77777887765 111111100 1122345789999994 5677777788889999954 332 22233332
Q ss_pred C-----CccEEEEEEccCCCEEEEeeCCCeEEEE
Q psy14815 224 H-----TSTVWSLAFDRIGSRLATCSDDATVKIW 252 (479)
Q Consensus 224 ~-----~~~v~~~~~~~~~~~l~s~~~dg~i~iw 252 (479)
| -.+.-.|+|.++|+..+ .++-+..++|
T Consensus 215 ~gl~~~~~QpEGIa~d~~G~LYI-vsEpNlfy~f 247 (248)
T PF06977_consen 215 HGLSKDIPQPEGIAFDPDGNLYI-VSEPNLFYRF 247 (248)
T ss_dssp GG-SS---SEEEEEE-TT--EEE-EETTTEEEEE
T ss_pred cCcccccCCccEEEECCCCCEEE-EcCCceEEEe
Confidence 1 13567899999986554 4455544443
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00066 Score=65.09 Aligned_cols=230 Identities=14% Similarity=0.169 Sum_probs=115.6
Q ss_pred ccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 7 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
+-...-....+.++|+|++++.++ ||.-.|+.....+
T Consensus 28 lg~~~~~p~~ls~npngr~v~V~g-~geY~iyt~~~~r------------------------------------------ 64 (443)
T PF04053_consen 28 LGSCEIYPQSLSHNPNGRFVLVCG-DGEYEIYTALAWR------------------------------------------ 64 (443)
T ss_dssp EEE-SS--SEEEE-TTSSEEEEEE-TTEEEEEETTTTE------------------------------------------
T ss_pred CCCCCcCCeeEEECCCCCEEEEEc-CCEEEEEEccCCc------------------------------------------
Confidence 333445578899999999988854 7777777521100
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCC
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 166 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~ 166 (479)
....+.-....|.+. ..+|+-...++|.|+.--+.. ....++. ...+..+-. |..|+..+.+ .|.+||+.+.
T Consensus 65 ~k~~G~g~~~vw~~~-n~yAv~~~~~~I~I~kn~~~~--~~k~i~~-~~~~~~If~---G~LL~~~~~~-~i~~yDw~~~ 136 (443)
T PF04053_consen 65 NKAFGSGLSFVWSSR-NRYAVLESSSTIKIYKNFKNE--VVKSIKL-PFSVEKIFG---GNLLGVKSSD-FICFYDWETG 136 (443)
T ss_dssp EEEEEE-SEEEE-TS-SEEEEE-TTS-EEEEETTEE---TT------SS-EEEEE----SSSEEEEETT-EEEEE-TTT-
T ss_pred ccccCceeEEEEecC-ccEEEEECCCeEEEEEcCccc--cceEEcC-CcccceEEc---CcEEEEECCC-CEEEEEhhHc
Confidence 112244556788884 457777778899996322221 2112221 123444433 7777777554 8999999987
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCc------ccce-EeeeeecCCCccEEEEEEccCCCE
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA------EADW-INFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~------~~~~-~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
..+..+.. .+|..+.|++++++++..+.+ .+.+++.... +... ..+..+..-...|.+.+|..+ -+
T Consensus 137 ---~~i~~i~v--~~vk~V~Ws~~g~~val~t~~-~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d-~f 209 (443)
T PF04053_consen 137 ---KLIRRIDV--SAVKYVIWSDDGELVALVTKD-SIYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED-CF 209 (443)
T ss_dssp ----EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT-EE
T ss_pred ---ceeeEEec--CCCcEEEEECCCCEEEEEeCC-eEEEEEecchhcccccccCchhceEEEEEecceeEEEEEEcC-EE
Confidence 44444443 238999999999999988765 6777776543 0000 012222222467888888865 33
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCC
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
+++. .. .++.+- .+ ....+..+ ..+++=+.+.+..+.+.....|+.+..+.++..
T Consensus 210 iYtT-~~-~lkYl~--~G-------------e~~~i~~l----d~~~yllgy~~~~~~ly~~Dr~~~v~~~~ld~~ 264 (443)
T PF04053_consen 210 IYTT-SN-HLKYLV--NG-------------ETGIIAHL----DKPLYLLGYLPKENRLYLIDRDGNVISYELDLS 264 (443)
T ss_dssp EEE--TT-EEEEEE--TT-------------EEEEEEE-----SS--EEEEEETTTTEEEEE-TT--EEEEE--HH
T ss_pred EEEc-CC-eEEEEE--cC-------------CcceEEEc----CCceEEEEEEccCCEEEEEECCCCEEEEEECHH
Confidence 3333 33 676632 11 11222222 446777777777677777888888888876654
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.0075 Score=54.60 Aligned_cols=200 Identities=15% Similarity=0.129 Sum_probs=112.4
Q ss_pred EEEECCCCCEEEEEEC--CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeee
Q psy14815 95 ETAWSPCGNFIASASF--DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA 172 (479)
Q Consensus 95 ~v~~~~~~~~l~t~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 172 (479)
.++++.|+++++.... -.+|.|-|+..++. +..+... .+..+-=+ .++.|.+-|.||.+.-..+....+....
T Consensus 99 ~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kv--v~ei~~P--GC~~iyP~-~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~ 173 (342)
T PF06433_consen 99 MFALSADGKFLYVQNFTPATSVTVVDLAAKKV--VGEIDTP--GCWLIYPS-GNRGFSMLCGDGSLLTVTLDADGKEAQK 173 (342)
T ss_dssp GEEE-TTSSEEEEEEESSSEEEEEEETTTTEE--EEEEEGT--SEEEEEEE-ETTEEEEEETTSCEEEEEETSTSSEEEE
T ss_pred ceEEccCCcEEEEEccCCCCeEEEEECCCCce--eeeecCC--CEEEEEec-CCCceEEEecCCceEEEEECCCCCEeEe
Confidence 3578888988877643 46899999999974 3444321 22222212 2356888999999999999854332211
Q ss_pred --eeeeccccce-eEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC--------CCccEEEEEEccCCCEEE
Q psy14815 173 --AVINAHIQDV-KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS--------HTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 173 --~~~~~~~~~v-~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~ 241 (479)
..+.....++ ..-++...+..++.-+.+|.|+-.|+......+.....+.. -.+.-.-+++++..+.|+
T Consensus 174 ~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rly 253 (342)
T PF06433_consen 174 STKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLY 253 (342)
T ss_dssp EEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEE
T ss_pred eccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEE
Confidence 1111112222 23344555556666788999999998876543322222111 011222356665555554
Q ss_pred Eee--------CCCe--EEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC-eEEEE-eCCCeEEE
Q psy14815 242 TCS--------DDAT--VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATA-CGDDAIRI 309 (479)
Q Consensus 242 s~~--------~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~-~~dg~i~v 309 (479)
..- .|+. |-++|+ .+.+.+.++.. ..++.+|+.+.+.+ +|++. ..++.+.+
T Consensus 254 vLMh~g~~gsHKdpgteVWv~D~---------------~t~krv~Ri~l--~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v 316 (342)
T PF06433_consen 254 VLMHQGGEGSHKDPGTEVWVYDL---------------KTHKRVARIPL--EHPIDSIAVSQDDKPLLYALSAGDGTLDV 316 (342)
T ss_dssp EEEEE--TT-TTS-EEEEEEEET---------------TTTEEEEEEEE--EEEESEEEEESSSS-EEEEEETTTTEEEE
T ss_pred EEecCCCCCCccCCceEEEEEEC---------------CCCeEEEEEeC--CCccceEEEccCCCcEEEEEcCCCCeEEE
Confidence 421 2233 334444 23355666664 34688999998876 55544 45799999
Q ss_pred cccCCCC
Q psy14815 310 FKENPEA 316 (479)
Q Consensus 310 w~~~~~~ 316 (479)
||..+++
T Consensus 317 ~D~~tGk 323 (342)
T PF06433_consen 317 YDAATGK 323 (342)
T ss_dssp EETTT--
T ss_pred EeCcCCc
Confidence 9999998
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.01 Score=58.68 Aligned_cols=191 Identities=6% Similarity=-0.050 Sum_probs=105.7
Q ss_pred CCeEEEeeCCCcEEEEecccccccccccCCC----------------cc-ceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 23 GTMISSCGEDKNIRLWVMVIREPYEKLHGLP----------------VE-TSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 23 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~----------------~~-~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
+..++.++.++.+.-.|..+|+.+-.+.... .+ ..++....++.+..+|.++....+.....
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~- 139 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFGTFDGRLVALDAETGKQVWKFGNN- 139 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCeEEEecCCCeEEEEECCCCCEeeeecCC-
Confidence 4466677778999999999888776543211 12 45666667788888888765544443221
Q ss_pred ccccCCcEEEEEECC--CCCEEEEEE---------CCCeEEEEECCCCeEEEeEEEeCCC------------------Cc
Q psy14815 86 SDGHQRTIRETAWSP--CGNFIASAS---------FDATTAVWDKRSGQFECNATLEGHE------------------NE 136 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~--~~~~l~t~~---------~dg~i~iwd~~~~~~~~~~~~~~~~------------------~~ 136 (479)
.+...-..+.-+| .+..++.++ .++.+..+|..+|+..-........ ..
T Consensus 140 --~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 217 (488)
T cd00216 140 --DQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGT 217 (488)
T ss_pred --CCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCC
Confidence 1100000111122 124455553 3678999999999743332221110 00
Q ss_pred E-EEEEEcCCCCEEEEEeCCC------------------cEEEEEeCCCCceeeeeeeecccc----ceeEEEEe----c
Q psy14815 137 V-KSVTWSKNGQFLATCSRDK------------------SVWVWEVGEEDEYECAAVINAHIQ----DVKKVRFH----P 189 (479)
Q Consensus 137 v-~~l~~~~~~~~l~~~~~dg------------------~i~vwd~~~~~~~~~~~~~~~~~~----~v~~l~~~----~ 189 (479)
+ .+..+.+.+..++.++.++ .+.-+|..+++..-..+ ...+.. ......+. -
T Consensus 218 vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~-~~~~~~~~~~~~s~p~~~~~~~~ 296 (488)
T cd00216 218 SWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQ-TTPHDLWDYDGPNQPSLADIKPK 296 (488)
T ss_pred ccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEee-CCCCCCcccccCCCCeEEecccc
Confidence 1 1234444566788887665 68888998885322211 111110 00001111 1
Q ss_pred CCC---EEEEEEcCCcEEEEecCCcccceEe
Q psy14815 190 FDN---ILASASYDDTVKLFKEDKAEADWIN 217 (479)
Q Consensus 190 ~~~---~l~~~~~dg~i~i~d~~~~~~~~~~ 217 (479)
++. .++.++.+|.+..+|.++++..|..
T Consensus 297 ~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~ 327 (488)
T cd00216 297 DGKPVPAIVHAPKNGFFYVLDRTTGKLISAR 327 (488)
T ss_pred CCCeeEEEEEECCCceEEEEECCCCcEeeEe
Confidence 232 6778889999999999999875543
|
The alignment model contains an 8-bladed beta-propeller. |
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.0047 Score=59.23 Aligned_cols=203 Identities=8% Similarity=0.047 Sum_probs=105.5
Q ss_pred eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceee---eeeeeccccceeEEEEec
Q psy14815 113 TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYEC---AAVINAHIQDVKKVRFHP 189 (479)
Q Consensus 113 ~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~---~~~~~~~~~~v~~l~~~~ 189 (479)
.|+||+..... .....++. +.+.++.|+.+. .|++-..||.+++||+....+... .....-....+....+..
T Consensus 62 ~I~iys~sG~l-l~~i~w~~--~~iv~~~wt~~e-~LvvV~~dG~v~vy~~~G~~~fsl~~~i~~~~v~e~~i~~~~~~~ 137 (410)
T PF04841_consen 62 SIQIYSSSGKL-LSSIPWDS--GRIVGMGWTDDE-ELVVVQSDGTVRVYDLFGEFQFSLGEEIEEEKVLECRIFAIWFYK 137 (410)
T ss_pred EEEEECCCCCE-eEEEEECC--CCEEEEEECCCC-eEEEEEcCCEEEEEeCCCceeechhhhccccCcccccccccccCC
Confidence 59999976553 23333443 789999999754 566677999999999975420000 100011111122223333
Q ss_pred CCCEEEEEEcCCcEEEEecCCcccceEeeeeec-------CCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCC
Q psy14815 190 FDNILASASYDDTVKLFKEDKAEADWINFATLK-------SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAG 262 (479)
Q Consensus 190 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 262 (479)
+| ++.-..++.+.+..--............. .+........++.+....+....++.+.+-+-...
T Consensus 138 ~G--ivvLt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~----- 210 (410)
T PF04841_consen 138 NG--IVVLTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSF----- 210 (410)
T ss_pred CC--EEEECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccc-----
Confidence 44 33333444444432221110000000111 01111001234444445555555555664442110
Q ss_pred CCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEE
Q psy14815 263 IPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVA 342 (479)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 342 (479)
..+.. .+++..++.||+++++|.-..+|.+.+.+.+..+ ........-......+.
T Consensus 211 -------------~~i~~--~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~---------~~~e~~~~~~~~p~~~~ 266 (410)
T PF04841_consen 211 -------------KQIDS--DGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSE---------KLCEFDTDSKSPPKQMA 266 (410)
T ss_pred -------------ccccC--CCCeEEEEECCCCCEEEEEECCCCEEEEECcccc---------eeEEeecCcCCCCcEEE
Confidence 01111 4589999999999999999999999998876654 22222223345667888
Q ss_pred ecCCCCCC
Q psy14815 343 WNPVVPEP 350 (479)
Q Consensus 343 ~sp~~~~l 350 (479)
|.-+...+
T Consensus 267 WCG~dav~ 274 (410)
T PF04841_consen 267 WCGNDAVV 274 (410)
T ss_pred EECCCcEE
Confidence 88876543
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00048 Score=69.70 Aligned_cols=137 Identities=12% Similarity=0.139 Sum_probs=93.6
Q ss_pred CCeEEEe-eCCCcEEEEecccccccccccCCC----------------ccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 23 GTMISSC-GEDKNIRLWVMVIREPYEKLHGLP----------------VETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 23 ~~~l~t~-~~dg~v~iwd~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
.++|+.. .....|.-.|++.|+.+..+..+. .......+.+++.+..||.+-.+++.......
T Consensus 493 ~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k 572 (794)
T PF08553_consen 493 RNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSK 572 (794)
T ss_pred cceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeecccc
Confidence 3444443 345667777777777665544332 13345667788899999998654332211122
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
........+|++-+.+| +||+|+.+|.||+||-- ++ .....+++-..+|..|..+.||++++..+. ..+.+++.
T Consensus 573 ~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~-g~-~AKT~lp~lG~pI~~iDvt~DGkwilaTc~-tyLlLi~t 646 (794)
T PF08553_consen 573 QYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRL-GK-RAKTALPGLGDPIIGIDVTADGKWILATCK-TYLLLIDT 646 (794)
T ss_pred ccccCCCceEEEecCCc-eEEEEeCCCcEEeeccc-ch-hhhhcCCCCCCCeeEEEecCCCcEEEEeec-ceEEEEEE
Confidence 23456678888888776 89999999999999943 32 356677788899999999999998877655 56666665
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.011 Score=51.92 Aligned_cols=206 Identities=14% Similarity=0.175 Sum_probs=110.5
Q ss_pred ccccCCcEEEEEECCCCC-EEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeC
Q psy14815 86 SDGHQRTIRETAWSPCGN-FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 164 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~ 164 (479)
..+-...++.++|+|+.+ ++++....+.|..++.+ |+......+.+ .+..-.|++..++.++++--.++.+.++++.
T Consensus 17 l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g-~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~ 94 (248)
T PF06977_consen 17 LPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIPLDG-FGDYEGITYLGNGRYVLSEERDQRLYIFTID 94 (248)
T ss_dssp -TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE-SS--SSEEEEEE-STTEEEEEETTTTEEEEEEE-
T ss_pred CCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEeCCC-CCCceeEEEECCCEEEEEEcCCCcEEEEEEe
Confidence 345666799999999755 55666667888888874 65444455554 3567899998888777766568999999995
Q ss_pred CCCc---eeeeeee-----eccccceeEEEEecCCCEEEEEEcCCcEEEEecCC--cccceEee-----eeecCCCccEE
Q psy14815 165 EEDE---YECAAVI-----NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK--AEADWINF-----ATLKSHTSTVW 229 (479)
Q Consensus 165 ~~~~---~~~~~~~-----~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~--~~~~~~~~-----~~~~~~~~~v~ 229 (479)
.... ......+ ..+...+-.++|+|.++.|+.+-+..-..+|.++. ........ .........+.
T Consensus 95 ~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S 174 (248)
T PF06977_consen 95 DDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLS 174 (248)
T ss_dssp ---TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---
T ss_pred ccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceecccc
Confidence 4321 1111111 12445688999999888888888777777777664 11110000 00122344578
Q ss_pred EEEEccCCCEE-EEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEE--Eecc------ccccEEEEEecCCCCeEEE
Q psy14815 230 SLAFDRIGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT--LSGH------HGRTIYDISWCHLTDLIAT 300 (479)
Q Consensus 230 ~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------~~~~i~~l~~~~~~~~l~~ 300 (479)
+++++|....| +....+..|..+|. .+ +.+.. +... .-.....|+|.++|.+.++
T Consensus 175 ~l~~~p~t~~lliLS~es~~l~~~d~-~G---------------~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIv 238 (248)
T PF06977_consen 175 GLSYDPRTGHLLILSDESRLLLELDR-QG---------------RVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIV 238 (248)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEE-T-T-----------------EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEE
T ss_pred ceEEcCCCCeEEEEECCCCeEEEECC-CC---------------CEEEEEEeCCcccCcccccCCccEEEECCCCCEEEE
Confidence 89999876554 45556677888883 11 22222 2221 0124678999999865554
Q ss_pred EeCCCeEEEc
Q psy14815 301 ACGDDAIRIF 310 (479)
Q Consensus 301 ~~~dg~i~vw 310 (479)
++-+..++|
T Consensus 239 -sEpNlfy~f 247 (248)
T PF06977_consen 239 -SEPNLFYRF 247 (248)
T ss_dssp -ETTTEEEEE
T ss_pred -cCCceEEEe
Confidence 455555544
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00025 Score=69.79 Aligned_cols=35 Identities=17% Similarity=0.400 Sum_probs=32.0
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECC
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR 120 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~ 120 (479)
...|..+|..+.||++|..++++..-|.+.+|...
T Consensus 97 ~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 97 VETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred ccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 35799999999999999999999999999999765
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00089 Score=63.96 Aligned_cols=154 Identities=17% Similarity=0.217 Sum_probs=96.3
Q ss_pred cCCcEEEEEECCCCCEEEEEEC---C-CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEE-eCCCc--EEEE
Q psy14815 89 HQRTIRETAWSPCGNFIASASF---D-ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC-SRDKS--VWVW 161 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~---d-g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~--i~vw 161 (479)
....+..-+|+|++..++.... . ..+.++++.+++...+..+.++. ...+|+|||+.++.. ..||. |.++
T Consensus 191 ~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~---~~P~fspDG~~l~f~~~rdg~~~iy~~ 267 (425)
T COG0823 191 SGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGNN---GAPAFSPDGSKLAFSSSRDGSPDIYLM 267 (425)
T ss_pred cCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCcc---CCccCCCCCCEEEEEECCCCCccEEEE
Confidence 3456777889999987765532 2 46999999999766666655554 467899999876655 45665 5556
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc-CCc--EEEEecCCcccceEeeeeecCCCccEEEEEEccCCC
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DDT--VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS 238 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~--i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 238 (479)
|+..... ..+....+.-+.=.|+|+|+.++..+. .|. |.+++.+.... ..+......-..-.|+|+|+
T Consensus 268 dl~~~~~----~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-----~riT~~~~~~~~p~~SpdG~ 338 (425)
T COG0823 268 DLDGKNL----PRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-----TRLTFSGGGNSNPVWSPDGD 338 (425)
T ss_pred cCCCCcc----eecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-----eEeeccCCCCcCccCCCCCC
Confidence 6666532 223333333335679999998887764 343 66666665442 22222222222678999999
Q ss_pred EEEEeeCC-Ce--EEEEec
Q psy14815 239 RLATCSDD-AT--VKIWKE 254 (479)
Q Consensus 239 ~l~s~~~d-g~--i~iwd~ 254 (479)
+++..+.. |. |.+.|+
T Consensus 339 ~i~~~~~~~g~~~i~~~~~ 357 (425)
T COG0823 339 KIVFESSSGGQWDIDKNDL 357 (425)
T ss_pred EEEEEeccCCceeeEEecc
Confidence 99877643 44 444443
|
|
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.012 Score=54.33 Aligned_cols=141 Identities=11% Similarity=0.048 Sum_probs=70.5
Q ss_pred EEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEc--CCCCEEEEEeC---C--------------
Q psy14815 95 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWS--KNGQFLATCSR---D-------------- 155 (479)
Q Consensus 95 ~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~--~~~~~l~~~~~---d-------------- 155 (479)
...++|+++.++.......++-.|+++.+...+..+. ...+-...|. .++..++-.-. |
T Consensus 85 g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p--~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~ 162 (386)
T PF14583_consen 85 GGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEVP--DDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFY 162 (386)
T ss_dssp T-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE----TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHH
T ss_pred ceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEECC--cccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHH
Confidence 3556788888877766678999999998755454444 4555455664 35555433211 1
Q ss_pred -----CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCC-----cEEEEecCCcccceEeeeeecCCC
Q psy14815 156 -----KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD-----TVKLFKEDKAEADWINFATLKSHT 225 (479)
Q Consensus 156 -----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~ 225 (479)
..|.--|+.+++ ...+......+..+.|+|....+++-+..| .-|||-++.......++.... ..
T Consensus 163 ~a~p~~~i~~idl~tG~----~~~v~~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~-~~ 237 (386)
T PF14583_consen 163 EARPHCRIFTIDLKTGE----RKVVFEDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRM-EG 237 (386)
T ss_dssp HC---EEEEEEETTT------EEEEEEESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS----TT
T ss_pred hhCCCceEEEEECCCCc----eeEEEecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCC-CC
Confidence 234444555542 122223345677899999665555554433 236776665443333333222 23
Q ss_pred ccEEEEEEccCCCEEEE
Q psy14815 226 STVWSLAFDRIGSRLAT 242 (479)
Q Consensus 226 ~~v~~~~~~~~~~~l~s 242 (479)
..+..=-|.|+|..|.-
T Consensus 238 e~~gHEfw~~DG~~i~y 254 (386)
T PF14583_consen 238 ESVGHEFWVPDGSTIWY 254 (386)
T ss_dssp EEEEEEEE-TTSS-EEE
T ss_pred cccccccccCCCCEEEE
Confidence 44555568899876643
|
|
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.019 Score=53.40 Aligned_cols=182 Identities=14% Similarity=0.121 Sum_probs=112.4
Q ss_pred CeEEEEECCCCeEEEeEEEeCCCCcEEEEE---EcCC----CCEEEEEeC---------C-CcEEEEEeCCC----Ccee
Q psy14815 112 ATTAVWDKRSGQFECNATLEGHENEVKSVT---WSKN----GQFLATCSR---------D-KSVWVWEVGEE----DEYE 170 (479)
Q Consensus 112 g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~---~~~~----~~~l~~~~~---------d-g~i~vwd~~~~----~~~~ 170 (479)
..|++.|..+.+......++.. ..+.+++ +..+ ..++++|+. . |.|.++++... ..++
T Consensus 2 s~i~l~d~~~~~~~~~~~l~~~-E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~ 80 (321)
T PF03178_consen 2 SSIRLVDPTTFEVLDSFELEPN-EHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLK 80 (321)
T ss_dssp -EEEEEETTTSSEEEEEEEETT-EEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEE
T ss_pred cEEEEEeCCCCeEEEEEECCCC-ceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEE
Confidence 4688899888775555666643 3444444 3322 467777764 2 88999999883 2233
Q ss_pred eeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEE
Q psy14815 171 CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 250 (479)
Q Consensus 171 ~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 250 (479)
.+.. ....++|++++-- +++ |+++. ++.|.+|++...+ .......... ...+.++... +++++.|.....+.
T Consensus 81 ~i~~-~~~~g~V~ai~~~-~~~-lv~~~-g~~l~v~~l~~~~-~l~~~~~~~~-~~~i~sl~~~--~~~I~vgD~~~sv~ 152 (321)
T PF03178_consen 81 LIHS-TEVKGPVTAICSF-NGR-LVVAV-GNKLYVYDLDNSK-TLLKKAFYDS-PFYITSLSVF--KNYILVGDAMKSVS 152 (321)
T ss_dssp EEEE-EEESS-EEEEEEE-TTE-EEEEE-TTEEEEEEEETTS-SEEEEEEE-B-SSSEEEEEEE--TTEEEEEESSSSEE
T ss_pred EEEE-EeecCcceEhhhh-CCE-EEEee-cCEEEEEEccCcc-cchhhheecc-eEEEEEEecc--ccEEEEEEcccCEE
Confidence 3322 2346788888766 344 44443 5789999998766 1233333332 2366666655 66999999888888
Q ss_pred EEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCC
Q psy14815 251 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 251 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
++..+... .....+.. ......++++.|-++++.++.+..+|.+.++.....
T Consensus 153 ~~~~~~~~-----------~~l~~va~--d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~ 204 (321)
T PF03178_consen 153 LLRYDEEN-----------NKLILVAR--DYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPE 204 (321)
T ss_dssp EEEEETTT-----------E-EEEEEE--ESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS
T ss_pred EEEEEccC-----------CEEEEEEe--cCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCC
Confidence 88664321 11122222 222567899999866678999999999999998753
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.013 Score=50.18 Aligned_cols=96 Identities=8% Similarity=-0.057 Sum_probs=62.3
Q ss_pred CCCeEEEeeCCCcEEEEecccccccccc------cCC--CccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcE
Q psy14815 22 QGTMISSCGEDKNIRLWVMVIREPYEKL------HGL--PVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 93 (479)
Q Consensus 22 ~~~~l~t~~~dg~v~iwd~~~~~~~~~~------~~~--~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v 93 (479)
..++++.||..+.+.--|..+|..+..- ... -.++.++.+...+.+.+.+.++...-+..... +.|
T Consensus 22 skT~v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~vvgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~------~~v 95 (354)
T KOG4649|consen 22 SKTLVVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAIVVGDFVVLGCYSGGLYFLCVKTGSQIWNFVIL------ETV 95 (354)
T ss_pred CceEEEEecCCceEEEecCCCCcEEeehhhCceeeeeeEEECCEEEEEEccCcEEEEEecchhheeeeeeh------hhh
Confidence 4777888888777777777776654321 111 13455677777888888887764443433321 122
Q ss_pred E-EEEECCCCCEEEEEECCCeEEEEECCCCe
Q psy14815 94 R-ETAWSPCGNFIASASFDATTAVWDKRSGQ 123 (479)
Q Consensus 94 ~-~v~~~~~~~~l~t~~~dg~i~iwd~~~~~ 123 (479)
. .....+++..+..|+.|++....|.++..
T Consensus 96 k~~a~~d~~~glIycgshd~~~yalD~~~~~ 126 (354)
T KOG4649|consen 96 KVRAQCDFDGGLIYCGSHDGNFYALDPKTYG 126 (354)
T ss_pred ccceEEcCCCceEEEecCCCcEEEecccccc
Confidence 2 12345688999999999999999988765
|
|
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.017 Score=55.46 Aligned_cols=190 Identities=13% Similarity=0.171 Sum_probs=95.7
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe--CCCCc-----EEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE--GHENE-----VKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~-----v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
+.+.++.|+.+ ..|+....||.++++|+.... ...+. ..... +....+..+| ++.-..++.+.+.+-
T Consensus 81 ~~iv~~~wt~~-e~LvvV~~dG~v~vy~~~G~~---~fsl~~~i~~~~v~e~~i~~~~~~~~G--ivvLt~~~~~~~v~n 154 (410)
T PF04841_consen 81 GRIVGMGWTDD-EELVVVQSDGTVRVYDLFGEF---QFSLGEEIEEEKVLECRIFAIWFYKNG--IVVLTGNNRFYVVNN 154 (410)
T ss_pred CCEEEEEECCC-CeEEEEEcCCEEEEEeCCCce---eechhhhccccCcccccccccccCCCC--EEEECCCCeEEEEeC
Confidence 79999999875 466677789999999987432 11111 11112 2222333344 333334444433322
Q ss_pred CCCC-ceeeeeeeec-------cccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEcc
Q psy14815 164 GEED-EYECAAVINA-------HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR 235 (479)
Q Consensus 164 ~~~~-~~~~~~~~~~-------~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 235 (479)
.... ..+....... +........++.+....+....++.+.+.+-.... .+. ..+++..++.||
T Consensus 155 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~-------~i~-~~~~i~~iavSp 226 (410)
T PF04841_consen 155 IDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFK-------QID-SDGPIIKIAVSP 226 (410)
T ss_pred ccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEccccc-------ccc-CCCCeEEEEECC
Confidence 1111 0001101100 10000012234444445555555556644433211 111 246899999999
Q ss_pred CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcc
Q psy14815 236 IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 236 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~ 311 (479)
+++++|.-..+|.+.+.+..-.. ....+.........++.|+-+...++.- ...+.+..
T Consensus 227 ng~~iAl~t~~g~l~v~ssDf~~---------------~~~e~~~~~~~~p~~~~WCG~dav~l~~--~~~l~lvg 285 (410)
T PF04841_consen 227 NGKFIALFTDSGNLWVVSSDFSE---------------KLCEFDTDSKSPPKQMAWCGNDAVVLSW--EDELLLVG 285 (410)
T ss_pred CCCEEEEEECCCCEEEEECcccc---------------eeEEeecCcCCCCcEEEEECCCcEEEEe--CCEEEEEC
Confidence 99999999999999888753222 2233332223456677777654333322 33444443
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.81 E-value=3.3e-05 Score=45.72 Aligned_cols=38 Identities=39% Similarity=0.722 Sum_probs=34.4
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEe
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWV 39 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd 39 (479)
.+...+..|...|+++.|+++++++++++.|+.+++|+
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 35677889999999999999999999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00016 Score=68.95 Aligned_cols=96 Identities=17% Similarity=0.245 Sum_probs=77.0
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEE-EEEEcCCCCEEEEEeCCCcEEEEEeCCCC
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVK-SVTWSKNGQFLATCSRDKSVWVWEVGEED 167 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~-~l~~~~~~~~l~~~~~dg~i~vwd~~~~~ 167 (479)
-...+.-+.|+|.-.++|++..+|.|.+..+.- ..+.+++-+...++ +++|.|||+.|++|-.||+|++.|+..+.
T Consensus 19 l~~~i~~~ewnP~~dLiA~~t~~gelli~R~n~---qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~ 95 (665)
T KOG4640|consen 19 LPINIKRIEWNPKMDLIATRTEKGELLIHRLNW---QRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGG 95 (665)
T ss_pred cccceEEEEEcCccchhheeccCCcEEEEEecc---ceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCC
Confidence 346788899999999999999999999998873 36778877777777 99999999999999999999999999875
Q ss_pred ceeeeeeeeccccceeEEEEec
Q psy14815 168 EYECAAVINAHIQDVKKVRFHP 189 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~ 189 (479)
.... .......+|+++-|++
T Consensus 96 ~l~~--~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 96 RLVS--FLFSVETDISKGIWDR 115 (665)
T ss_pred ceec--cccccccchheeeccc
Confidence 3221 1223345677777763
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.0015 Score=62.51 Aligned_cols=142 Identities=14% Similarity=0.120 Sum_probs=81.9
Q ss_pred cEEEEEECCCCCEEEEEEC-CC--eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-CCc--EEEEEeCC
Q psy14815 92 TIRETAWSPCGNFIASASF-DA--TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DKS--VWVWEVGE 165 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~--i~vwd~~~ 165 (479)
.-..-+|+|||++|+.+.. || .|.+.|+.+++... +....+.-..-.|+|||+.++-.+. .|. |.++|.+.
T Consensus 239 ~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~---Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g 315 (425)
T COG0823 239 NNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPR---LTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEG 315 (425)
T ss_pred ccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCccee---cccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCC
Confidence 3445679999988876654 55 56666888776322 3322233336789999998776654 555 44555554
Q ss_pred CCceeeeeeeeccccceeEEEEecCCCEEEEEEcC-Cc--EEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 166 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYD-DT--VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 166 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-g~--i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
... ..+......-..-.|+|+|++++..+.. |. |.+.|+.++.. .. .-........-.|.++++.+..
T Consensus 316 ~~~----~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~----~~-~lt~~~~~e~ps~~~ng~~i~~ 386 (425)
T COG0823 316 SQV----TRLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGK----IR-ILTSTYLNESPSWAPNGRMIMF 386 (425)
T ss_pred Cce----eEeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCc----EE-EccccccCCCCCcCCCCceEEE
Confidence 422 2232222333367899999998887743 44 56666655442 11 1112223334567777777665
Q ss_pred eeC
Q psy14815 243 CSD 245 (479)
Q Consensus 243 ~~~ 245 (479)
.+.
T Consensus 387 ~s~ 389 (425)
T COG0823 387 SSG 389 (425)
T ss_pred ecc
Confidence 443
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.067 Score=51.87 Aligned_cols=247 Identities=12% Similarity=0.153 Sum_probs=127.5
Q ss_pred ceEEEEECCCCCeEEEe-eCC----CcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecc
Q psy14815 13 RVWNVSWNPQGTMISSC-GED----KNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSD 87 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~-~~d----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~ 87 (479)
.+...++||+|+++|-+ +.. .++++.|+++++.+... +
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~----------------------------------i--- 167 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDG----------------------------------I--- 167 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEE----------------------------------E---
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCc----------------------------------c---
Confidence 44467899999988765 333 34899998887543210 0
Q ss_pred ccCCcEEEEEECCCCCEEEEEECCC-----------eEEEEECCCCeEEEeEEEeCCCCc--EEEEEEcCCCCEEEEEeC
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFDA-----------TTAVWDKRSGQFECNATLEGHENE--VKSVTWSKNGQFLATCSR 154 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~~--v~~l~~~~~~~~l~~~~~ 154 (479)
.......+.|.++++.|+....+. .|+.|.+.+........+...... ...+..++|+++++..+.
T Consensus 168 -~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~ 246 (414)
T PF02897_consen 168 -ENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSS 246 (414)
T ss_dssp -EEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEE
T ss_pred -cccccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEE
Confidence 001112389999988777665433 478888877653333445443333 568889999998776544
Q ss_pred C----CcEEEEEeCCCC-ceeeeeeeeccccceeEEEEecCCCEEEEEE---cCCcEEEEecCCccc-ceEeeeeecCCC
Q psy14815 155 D----KSVWVWEVGEED-EYECAAVINAHIQDVKKVRFHPFDNILASAS---YDDTVKLFKEDKAEA-DWINFATLKSHT 225 (479)
Q Consensus 155 d----g~i~vwd~~~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~---~dg~i~i~d~~~~~~-~~~~~~~~~~~~ 225 (479)
. ..+.+.|+.... .......+......+....-+..+.+++... .++.|...++..... .+. ..+..+.
T Consensus 247 ~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~--~~l~~~~ 324 (414)
T PF02897_consen 247 SGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVDHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWW--TVLIPED 324 (414)
T ss_dssp SSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEEEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEE--EEEE--S
T ss_pred ccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEEEccCCEEEEeeCCCCCCcEEEEecccccccccce--eEEcCCC
Confidence 3 346777777640 0011222222233333322222444444433 245677778776653 122 1334444
Q ss_pred c--cEEEEEEccCCCEEE-EeeCCC--eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeE-E
Q psy14815 226 S--TVWSLAFDRIGSRLA-TCSDDA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI-A 299 (479)
Q Consensus 226 ~--~v~~~~~~~~~~~l~-s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l-~ 299 (479)
. .+..+.. .+++|+ ....++ .|+++++.. . .....+.....+.|..+...+++..+ +
T Consensus 325 ~~~~l~~~~~--~~~~Lvl~~~~~~~~~l~v~~~~~--------------~-~~~~~~~~p~~g~v~~~~~~~~~~~~~~ 387 (414)
T PF02897_consen 325 EDVSLEDVSL--FKDYLVLSYRENGSSRLRVYDLDD--------------G-KESREIPLPEAGSVSGVSGDFDSDELRF 387 (414)
T ss_dssp SSEEEEEEEE--ETTEEEEEEEETTEEEEEEEETT---------------T-EEEEEEESSSSSEEEEEES-TT-SEEEE
T ss_pred CceeEEEEEE--ECCEEEEEEEECCccEEEEEECCC--------------C-cEEeeecCCcceEEeccCCCCCCCEEEE
Confidence 4 3444444 345554 444444 578888741 1 22223332224456666655655533 2
Q ss_pred EE-eC--CCeEEEcccCCCC
Q psy14815 300 TA-CG--DDAIRIFKENPEA 316 (479)
Q Consensus 300 ~~-~~--dg~i~vw~~~~~~ 316 (479)
+. |. -+++..||+.+++
T Consensus 388 ~~ss~~~P~~~y~~d~~t~~ 407 (414)
T PF02897_consen 388 SYSSFTTPPTVYRYDLATGE 407 (414)
T ss_dssp EEEETTEEEEEEEEETTTTC
T ss_pred EEeCCCCCCEEEEEECCCCC
Confidence 22 22 2578888888876
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0044 Score=63.03 Aligned_cols=144 Identities=9% Similarity=0.043 Sum_probs=96.2
Q ss_pred CEEEEE-ECCCeEEEEECCCCeEEEeEEEeCCCCc-EEEEEEcC-----CCCEEEEEeCCCcEEEEEeCCCCceeeee-e
Q psy14815 103 NFIASA-SFDATTAVWDKRSGQFECNATLEGHENE-VKSVTWSK-----NGQFLATCSRDKSVWVWEVGEEDEYECAA-V 174 (479)
Q Consensus 103 ~~l~t~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~-v~~l~~~~-----~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~ 174 (479)
++|+.- .....|+-.|++.|+ .+...+.+... |..++=.. .+..-+.|-.+..+..||.|-... +.+. .
T Consensus 494 ~mil~~~~~~~~ly~mDLe~GK--VV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~-k~v~~~ 570 (794)
T PF08553_consen 494 NMILLDPNNPNKLYKMDLERGK--VVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGN-KLVDSQ 570 (794)
T ss_pred ceEeecCCCCCceEEEecCCCc--EEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCC-ceeecc
Confidence 444433 345788899999998 44555555433 44443221 234567888889999999997531 1111 1
Q ss_pred e--eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEE
Q psy14815 175 I--NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 252 (479)
Q Consensus 175 ~--~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw 252 (479)
. -......+|++-+.+| +||+|+.+|.||+||--. . .....+.+-..+|..|..+.||+++++.+ +..|.++
T Consensus 571 ~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g-~---~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi 644 (794)
T PF08553_consen 571 SKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLG-K---RAKTALPGLGDPIIGIDVTADGKWILATC-KTYLLLI 644 (794)
T ss_pred ccccccCCCceEEEecCCc-eEEEEeCCCcEEeecccc-h---hhhhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEE
Confidence 1 1233456777777666 699999999999999432 2 23455667789999999999999987655 5678888
Q ss_pred ecc
Q psy14815 253 KEY 255 (479)
Q Consensus 253 d~~ 255 (479)
+..
T Consensus 645 ~t~ 647 (794)
T PF08553_consen 645 DTL 647 (794)
T ss_pred EEe
Confidence 864
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.007 Score=45.00 Aligned_cols=101 Identities=18% Similarity=0.263 Sum_probs=65.7
Q ss_pred eeEEEEec---CC-CEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCC
Q psy14815 182 VKKVRFHP---FD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 257 (479)
Q Consensus 182 v~~l~~~~---~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 257 (479)
|+++++.. +| +.|++|+.|..|++|+-.. .+.++. -.+.|++++-... ..++.+-.+|+|-+|+-..
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e------~~~Ei~-e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~- 72 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDE------IVAEIT-ETDKVTSLCSLGG-GRFAYALANGTVGVYDRSQ- 72 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCCc------EEEEEe-cccceEEEEEcCC-CEEEEEecCCEEEEEeCcc-
Confidence 56666654 32 6899999999999998762 344444 3456777777665 5688888999999997411
Q ss_pred CCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC-C--C-CeEEEEeCCCeEEE
Q psy14815 258 GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-L--T-DLIATACGDDAIRI 309 (479)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~-~--~-~~l~~~~~dg~i~v 309 (479)
+.|+ .+. ...+.++.+.. + | +-|++|-.+|.|-+
T Consensus 73 ------------RlWR----iKS--K~~~~~~~~~D~~gdG~~eLI~GwsnGkve~ 110 (111)
T PF14783_consen 73 ------------RLWR----IKS--KNQVTSMAFYDINGDGVPELIVGWSNGKVEV 110 (111)
T ss_pred ------------eeee----ecc--CCCeEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence 1111 112 33456665543 2 2 26888888888753
|
|
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.072 Score=50.79 Aligned_cols=203 Identities=14% Similarity=0.120 Sum_probs=128.0
Q ss_pred CcEEEEEECCCCCEE-EEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC---CCcEEEEEeCCC
Q psy14815 91 RTIRETAWSPCGNFI-ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR---DKSVWVWEVGEE 166 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l-~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~---dg~i~vwd~~~~ 166 (479)
..-..++.++.+..+ ++...++.|.+.|..+.+. ..... -......++++++++.++++.. ++.+.+.|-.+.
T Consensus 74 ~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~--~~~~~-vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~ 150 (381)
T COG3391 74 VYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTV--LGSIP-VGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATN 150 (381)
T ss_pred ccccceeeCCCCCeEEEecCCCCeEEEEcCcccce--eeEee-eccCCceEEECCCCCEEEEEecccCCceEEEEeCCCC
Confidence 344567888887754 4444568999999777652 22222 1225678999999988888776 577888887776
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeC
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 245 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 245 (479)
+ .......-..+ ..++++|+|+.+.... .++.|.+.|................-...-..+.++++++++.....
T Consensus 151 ~---~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~ 226 (381)
T COG3391 151 K---VTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVAND 226 (381)
T ss_pred e---EEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEec
Confidence 3 22222222234 8899999998666555 78899999977544210000001122233457889999997765544
Q ss_pred C---CeEEEEeccCCCCCCCCCCCCCCCceEEEEE-EeccccccEEEEEecCCCCeEEEEeC-CCeEEEcccCCCC
Q psy14815 246 D---ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT-LSGHHGRTIYDISWCHLTDLIATACG-DDAIRIFKENPEA 316 (479)
Q Consensus 246 d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~l~~~~~~~~l~~~~~-dg~i~vw~~~~~~ 316 (479)
. +.+...|...... ... ...... ....+..+|+|+++.+... .+.+.+-|..+..
T Consensus 227 ~~~~~~v~~id~~~~~v---------------~~~~~~~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~ 286 (381)
T COG3391 227 GSGSNNVLKIDTATGNV---------------TATDLPVGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGATDR 286 (381)
T ss_pred cCCCceEEEEeCCCceE---------------EEeccccccC-CCCceeECCCCCEEEEEecCCCeEEEEeCCCCc
Confidence 3 4788887643321 111 111112 4556889999998888744 4888898888765
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.063 Score=48.80 Aligned_cols=194 Identities=11% Similarity=0.133 Sum_probs=120.2
Q ss_pred EEEECCCCCeEEEee--CCCcEEEEecccccccccccCC-------CccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 16 NVSWNPQGTMISSCG--EDKNIRLWVMVIREPYEKLHGL-------PVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 16 ~l~~s~~~~~l~t~~--~dg~v~iwd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
.++++.|+++++... =-.+|.|-|++.++.+..+... ..+..+.+.+.||.+.-..+...++........+
T Consensus 99 ~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PGC~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F 178 (342)
T PF06433_consen 99 MFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPGCWLIYPSGNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVF 178 (342)
T ss_dssp GEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTSEEEEEEEETTEEEEEETTSCEEEEEETSTSSEEEEEEEES
T ss_pred ceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCCEEEEEecCCCceEEEecCCceEEEEECCCCCEeEeecccc
Confidence 357788888877653 3456888888888877665543 2245688899999999999887666543333333
Q ss_pred cccCCcEE-EEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCC----------CcEEEEEEcCCCCEEEEEeCC
Q psy14815 87 DGHQRTIR-ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHE----------NEVKSVTWSKNGQFLATCSRD 155 (479)
Q Consensus 87 ~~~~~~v~-~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~----------~~v~~l~~~~~~~~l~~~~~d 155 (479)
....+++. .-++...+..++-.+.+|.|+--|+...........+--. +.-.-+++++..+.|++.-..
T Consensus 179 ~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~ 258 (342)
T PF06433_consen 179 DPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQ 258 (342)
T ss_dssp STTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE
T ss_pred CCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecC
Confidence 33334333 3445555667777889999999998877644444333111 123356777766666554321
Q ss_pred --------C--cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCC-EEEEEE-cCCcEEEEecCCccc
Q psy14815 156 --------K--SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASAS-YDDTVKLFKEDKAEA 213 (479)
Q Consensus 156 --------g--~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~-~dg~i~i~d~~~~~~ 213 (479)
+ .|-++|+.+. +.+..+.. ..++.+|..+.+.+ +|++.+ .++.+.+||..+++.
T Consensus 259 g~~gsHKdpgteVWv~D~~t~---krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~ 324 (342)
T PF06433_consen 259 GGEGSHKDPGTEVWVYDLKTH---KRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKL 324 (342)
T ss_dssp --TT-TTS-EEEEEEEETTTT---EEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--E
T ss_pred CCCCCccCCceEEEEEECCCC---eEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcE
Confidence 1 3777788777 44444442 34577999998765 554444 578999999998764
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.057 Score=51.46 Aligned_cols=158 Identities=16% Similarity=0.129 Sum_probs=104.6
Q ss_pred cEEEEEECCCCCEEEEEEC---CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEEeCCCC
Q psy14815 92 TIRETAWSPCGNFIASASF---DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEED 167 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vwd~~~~~ 167 (479)
....++++|+++.+..+.. ++++.+.|..+++.. .....-..+ ..++++|+|+.+++.. .++.+.+.|.....
T Consensus 117 ~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~--~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~ 193 (381)
T COG3391 117 GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVT--ATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNS 193 (381)
T ss_pred CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEE--EEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcc
Confidence 6677899999988877765 689999998888633 333322234 8999999999777776 68899999977653
Q ss_pred cee-eeeeeeccccceeEEEEecCCCEEEEEEcC---CcEEEEecCCcccceEeeee--ecCCCccEEEEEEccCCCEEE
Q psy14815 168 EYE-CAAVINAHIQDVKKVRFHPFDNILASASYD---DTVKLFKEDKAEADWINFAT--LKSHTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 168 ~~~-~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~ 241 (479)
..+ .......-...-..+.++|+++.+...... +.+...|..+... ... ..... ....+..+|+|+.+.
T Consensus 194 v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v----~~~~~~~~~~-~~~~v~~~p~g~~~y 268 (381)
T COG3391 194 VVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNV----TATDLPVGSG-APRGVAVDPAGKAAY 268 (381)
T ss_pred eeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceE----EEeccccccC-CCCceeECCCCCEEE
Confidence 221 000011112234578899999866665544 5888888886553 111 11111 455688999999988
Q ss_pred EeeC-CCeEEEEeccCC
Q psy14815 242 TCSD-DATVKIWKEYKP 257 (479)
Q Consensus 242 s~~~-dg~i~iwd~~~~ 257 (479)
+... .+.+.+-|....
T Consensus 269 v~~~~~~~V~vid~~~~ 285 (381)
T COG3391 269 VANSQGGTVSVIDGATD 285 (381)
T ss_pred EEecCCCeEEEEeCCCC
Confidence 8744 477888886443
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.011 Score=58.16 Aligned_cols=180 Identities=13% Similarity=0.041 Sum_probs=103.0
Q ss_pred ECCCCCeEEEee-CCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecC---CCCCCceeeeEEeccccCCcEE
Q psy14815 19 WNPQGTMISSCG-EDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGK---ESFGNKFTAKAILSDGHQRTIR 94 (479)
Q Consensus 19 ~s~~~~~l~t~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~---~~~~~~~~~~~~~~~~~~~~v~ 94 (479)
++|||+.+...+ ..+.+.+.|.++.+....+.... ....+.++.++....... +... .. ......... .
T Consensus 200 lpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~Vdg-npd~v~~spdGk~afvTsyNsE~G~---tl-~em~a~e~d--~ 272 (635)
T PRK02888 200 LPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMVDG-NLDNVDTDYDGKYAFSTCYNSEEGV---TL-AEMMAAERD--W 272 (635)
T ss_pred cCCCCCEeecccceeEEEEEEECccceEEEEEEeCC-CcccceECCCCCEEEEeccCcccCc---ce-eeeccccCc--e
Confidence 345666553332 34667777777665554443322 223333444444333332 1111 00 011011112 3
Q ss_pred EEEEC--------CCCCEEEEEECCCeEEEEECCC----CeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-CCcEEEE
Q psy14815 95 ETAWS--------PCGNFIASASFDATTAVWDKRS----GQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DKSVWVW 161 (479)
Q Consensus 95 ~v~~~--------~~~~~l~t~~~dg~i~iwd~~~----~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~i~vw 161 (479)
.+.|+ ++|++...+ ++.|.+.|..+ +. .....+. -......+.++|||+++++++. +.+|.+.
T Consensus 273 ~vvfni~~iea~vkdGK~~~V~--gn~V~VID~~t~~~~~~-~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVI 348 (635)
T PRK02888 273 VVVFNIARIEEAVKAGKFKTIG--GSKVPVVDGRKAANAGS-ALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVI 348 (635)
T ss_pred EEEEchHHHHHhhhCCCEEEEC--CCEEEEEECCccccCCc-ceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEE
Confidence 33333 467666553 57899999987 32 2333333 3456789999999998887765 8899999
Q ss_pred EeCCCCce---------eeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCC
Q psy14815 162 EVGEEDEY---------ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK 210 (479)
Q Consensus 162 d~~~~~~~---------~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~ 210 (479)
|+...+.. .......- ...-...+|.++|+...+-.-|..|..|++.+
T Consensus 349 Dv~k~k~~~~~~~~~~~~vvaevev-GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 349 DVRKLDDLFDGKIKPRDAVVAEPEL-GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred EChhhhhhhhccCCccceEEEeecc-CCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence 99875320 01122222 22234678999998888888999999999875
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00067 Score=64.87 Aligned_cols=98 Identities=14% Similarity=0.251 Sum_probs=77.1
Q ss_pred CCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEE-EEEecCCCCeEEEEe
Q psy14815 224 HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIY-DISWCHLTDLIATAC 302 (479)
Q Consensus 224 ~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~l~~~~~~~~l~~~~ 302 (479)
-...+..+.|+|.-..+|.+..+|.|.+..+. |.-+-++.-+ +.+++ +++|.|||++|++|=
T Consensus 19 l~~~i~~~ewnP~~dLiA~~t~~gelli~R~n----------------~qRlwtip~p-~~~v~~sL~W~~DGkllaVg~ 81 (665)
T KOG4640|consen 19 LPINIKRIEWNPKMDLIATRTEKGELLIHRLN----------------WQRLWTIPIP-GENVTASLCWRPDGKLLAVGF 81 (665)
T ss_pred cccceEEEEEcCccchhheeccCCcEEEEEec----------------cceeEeccCC-CCccceeeeecCCCCEEEEEe
Confidence 34567889999999999999999999888763 3334455543 45555 999999999999999
Q ss_pred CCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCC
Q psy14815 303 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347 (479)
Q Consensus 303 ~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~ 347 (479)
.||+|++-|+.++. .+.........+|.++-|+|..
T Consensus 82 kdG~I~L~Dve~~~---------~l~~~~~s~e~~is~~~w~~~~ 117 (665)
T KOG4640|consen 82 KDGTIRLHDVEKGG---------RLVSFLFSVETDISKGIWDRIE 117 (665)
T ss_pred cCCeEEEEEccCCC---------ceeccccccccchheeecccce
Confidence 99999999999987 4555444556788899998643
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.084 Score=48.22 Aligned_cols=190 Identities=11% Similarity=0.061 Sum_probs=104.0
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeE-EEeEEEe-C-CCCcEEEEEEcCCCCEEEEEeC---------CCcE
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQF-ECNATLE-G-HENEVKSVTWSKNGQFLATCSR---------DKSV 158 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~-~~~~~~~-~-~~~~v~~l~~~~~~~~l~~~~~---------dg~i 158 (479)
+.+.++..-..+..|+++.. .+.+++.+++.. ....... + .....+.+...|+|.+-++... ...-
T Consensus 66 ~~~~~~~~~d~~g~Lv~~~~--g~~~~~~~~~~~~t~~~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G 143 (307)
T COG3386 66 GGFSSGALIDAGGRLIACEH--GVRLLDPDTGGKITLLAEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTG 143 (307)
T ss_pred CCcccceeecCCCeEEEEcc--ccEEEeccCCceeEEeccccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcc
Confidence 34444444444555655543 466777665543 2222211 1 1134567788888886555433 0112
Q ss_pred EEEEeC-CCCceeeeeeeeccccceeEEEEecCCCEEEEEEc-CCcEEEEecCC--cccce-EeeeeecCCCccEEEEEE
Q psy14815 159 WVWEVG-EEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DDTVKLFKEDK--AEADW-INFATLKSHTSTVWSLAF 233 (479)
Q Consensus 159 ~vwd~~-~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~i~i~d~~~--~~~~~-~~~~~~~~~~~~v~~~~~ 233 (479)
.+|-+. .+ ........+-..-+.++|||+++.|..+.. .+.|.-|++.. +.... ..........+..-.++.
T Consensus 144 ~lyr~~p~g---~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~v 220 (307)
T COG3386 144 SLYRVDPDG---GVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAV 220 (307)
T ss_pred eEEEEcCCC---CEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEE
Confidence 445444 23 223333343444578999999987777765 47788887762 11111 112222234455566777
Q ss_pred ccCCCEEEEeeCCC-eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec-CCCCeEEEEe
Q psy14815 234 DRIGSRLATCSDDA-TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC-HLTDLIATAC 302 (479)
Q Consensus 234 ~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~~l~~~~ 302 (479)
..+|.+.+++..+| .|.+|+.. ++.+..+... ...+++++|- |+.+.|.+.+
T Consensus 221 DadG~lw~~a~~~g~~v~~~~pd----------------G~l~~~i~lP-~~~~t~~~FgG~~~~~L~iTs 274 (307)
T COG3386 221 DADGNLWVAAVWGGGRVVRFNPD----------------GKLLGEIKLP-VKRPTNPAFGGPDLNTLYITS 274 (307)
T ss_pred eCCCCEEEecccCCceEEEECCC----------------CcEEEEEECC-CCCCccceEeCCCcCEEEEEe
Confidence 88888776555554 89999853 3556666654 3567777775 4444444433
|
|
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.083 Score=47.92 Aligned_cols=195 Identities=12% Similarity=0.107 Sum_probs=104.8
Q ss_pred cEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeE-------------EEeCCCCcEEEEE--EcCCCCEEEEEeCCC
Q psy14815 92 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNA-------------TLEGHENEVKSVT--WSKNGQFLATCSRDK 156 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~-------------~~~~~~~~v~~l~--~~~~~~~l~~~~~dg 156 (479)
.|..+...|+-+.+++-+ |+.+.++++..-...... .+ .....+...+ -...+...+......
T Consensus 37 ~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~f~~~~~~~~~~~L~va~kk 114 (275)
T PF00780_consen 37 SITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSRSLPTKL-PETKGVSFFAVNGGHEGSRRLCVAVKK 114 (275)
T ss_pred eEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccccccccccccc-cccCCeeEEeeccccccceEEEEEECC
Confidence 499999999877777765 499999998754321110 11 1223344444 112333444444556
Q ss_pred cEEEEEeCCCC-ce-eeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC----------C
Q psy14815 157 SVWVWEVGEED-EY-ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS----------H 224 (479)
Q Consensus 157 ~i~vwd~~~~~-~~-~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----------~ 224 (479)
.|.+|...... .. .....+.- ...+.+++|. ++.++.|..+ ...+.|+.++... .+..... .
T Consensus 115 ~i~i~~~~~~~~~f~~~~ke~~l-p~~~~~i~~~--~~~i~v~~~~-~f~~idl~~~~~~--~l~~~~~~~~~~~~~~~~ 188 (275)
T PF00780_consen 115 KILIYEWNDPRNSFSKLLKEISL-PDPPSSIAFL--GNKICVGTSK-GFYLIDLNTGSPS--ELLDPSDSSSSFKSRNSS 188 (275)
T ss_pred EEEEEEEECCcccccceeEEEEc-CCCcEEEEEe--CCEEEEEeCC-ceEEEecCCCCce--EEeCccCCcchhhhcccC
Confidence 99999887742 22 23333332 4678899998 5667777654 4888898866541 1211111 1
Q ss_pred CccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC
Q psy14815 225 TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 304 (479)
Q Consensus 225 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d 304 (479)
..++..+..+ ++.+|++- |..-.+.|. .+.... . ..+.- ...+.++++ ...||+..+.
T Consensus 189 ~~~~~~~~~~-~~e~Ll~~--~~~g~fv~~-~G~~~r-----------~--~~i~W--~~~p~~~~~--~~pyli~~~~- 246 (275)
T PF00780_consen 189 SKPLGIFQLS-DNEFLLCY--DNIGVFVNK-NGEPSR-----------K--STIQW--SSAPQSVAY--SSPYLIAFSS- 246 (275)
T ss_pred CCceEEEEeC-CceEEEEe--cceEEEEcC-CCCcCc-----------c--cEEEc--CCchhEEEE--ECCEEEEECC-
Confidence 2233333433 34555543 232333332 111100 0 11111 224455555 3457776655
Q ss_pred CeEEEcccCCCC
Q psy14815 305 DAIRIFKENPEA 316 (479)
Q Consensus 305 g~i~vw~~~~~~ 316 (479)
+.|.||++.+++
T Consensus 247 ~~iEV~~~~~~~ 258 (275)
T PF00780_consen 247 NSIEVRSLETGE 258 (275)
T ss_pred CEEEEEECcCCc
Confidence 569999999997
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.026 Score=56.52 Aligned_cols=197 Identities=13% Similarity=0.185 Sum_probs=111.0
Q ss_pred EEEEECCCCCEEEEEECC------CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc-----EEEEE
Q psy14815 94 RETAWSPCGNFIASASFD------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS-----VWVWE 162 (479)
Q Consensus 94 ~~v~~~~~~~~l~t~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~-----i~vwd 162 (479)
.+++.. ++...++|+.| .++..||..++++.....+............ +|...++|+.||. +-.||
T Consensus 326 ~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~l--~g~iYavGG~dg~~~l~svE~YD 402 (571)
T KOG4441|consen 326 VGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVAVL--DGKLYAVGGFDGEKSLNSVECYD 402 (571)
T ss_pred ccEEEE-CCEEEEEccccCCCcccceEEEecCCCCceeccCCccCccccceeEEE--CCEEEEEeccccccccccEEEec
Confidence 344443 45678888888 3788999999987766555543333322222 6888899998874 77788
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCC------cEEEEecCCcccceEeeeeecCCCccEEEEEEccC
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD------TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 236 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 236 (479)
..+. .+.................+ +|.+.++|+.++ .+..||..+.. |..+..+..-........+ +
T Consensus 403 p~~~-~W~~va~m~~~r~~~gv~~~--~g~iYi~GG~~~~~~~l~sve~YDP~t~~--W~~~~~M~~~R~~~g~a~~--~ 475 (571)
T KOG4441|consen 403 PVTN-KWTPVAPMLTRRSGHGVAVL--GGKLYIIGGGDGSSNCLNSVECYDPETNT--WTLIAPMNTRRSGFGVAVL--N 475 (571)
T ss_pred CCCC-cccccCCCCcceeeeEEEEE--CCEEEEEcCcCCCccccceEEEEcCCCCc--eeecCCcccccccceEEEE--C
Confidence 7765 23333322221122222222 578888888654 46778877543 3444443332232222233 4
Q ss_pred CCEEEEeeCCC-----eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCC-----e
Q psy14815 237 GSRLATCSDDA-----TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD-----A 306 (479)
Q Consensus 237 ~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg-----~ 306 (479)
+...+.|+.|+ +|..||... ..|..+..+... ...+....+ +++..++|+.|| +
T Consensus 476 ~~iYvvGG~~~~~~~~~VE~ydp~~-------------~~W~~v~~m~~~-rs~~g~~~~--~~~ly~vGG~~~~~~l~~ 539 (571)
T KOG4441|consen 476 GKIYVVGGFDGTSALSSVERYDPET-------------NQWTMVAPMTSP-RSAVGVVVL--GGKLYAVGGFDGNNNLNT 539 (571)
T ss_pred CEEEEECCccCCCccceEEEEcCCC-------------CceeEcccCccc-cccccEEEE--CCEEEEEecccCccccce
Confidence 66677787776 366676532 334444333332 222222222 566778888775 5
Q ss_pred EEEcccCCCC
Q psy14815 307 IRIFKENPEA 316 (479)
Q Consensus 307 i~vw~~~~~~ 316 (479)
|..||..+.+
T Consensus 540 ve~ydp~~d~ 549 (571)
T KOG4441|consen 540 VECYDPETDT 549 (571)
T ss_pred eEEcCCCCCc
Confidence 7777766654
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.026 Score=42.05 Aligned_cols=100 Identities=16% Similarity=0.091 Sum_probs=67.1
Q ss_pred EEEEEECC---CC-CEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc
Q psy14815 93 IRETAWSP---CG-NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 93 v~~v~~~~---~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 168 (479)
|+++++.. +| +.|++|+.|..|++|+-.. .+..+.. .+.|+++.-... ..|+.+..+|+|-+|+-...
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e----~~~Ei~e-~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~R-- 73 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDE----IVAEITE-TDKVTSLCSLGG-GRFAYALANGTVGVYDRSQR-- 73 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCCc----EEEEEec-ccceEEEEEcCC-CEEEEEecCCEEEEEeCcce--
Confidence 56666654 32 6899999999999998543 4455553 456788877765 67999999999999986432
Q ss_pred eeeeeeeeccccceeEEEEec-C--C-CEEEEEEcCCcEE
Q psy14815 169 YECAAVINAHIQDVKKVRFHP-F--D-NILASASYDDTVK 204 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~-~--~-~~l~~~~~dg~i~ 204 (479)
+-..+. +..+.++.+.. + | ..|++|-.+|.|-
T Consensus 74 ---lWRiKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 74 ---LWRIKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred ---eeeecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 122222 23355665543 2 2 4788898888774
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00072 Score=39.60 Aligned_cols=38 Identities=21% Similarity=0.423 Sum_probs=32.4
Q ss_pred EEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcc
Q psy14815 273 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 273 ~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~ 311 (479)
.+...+..| ...|.++.|++++.++++++.|+.+++|+
T Consensus 3 ~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGH-TGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEec-CCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 345566665 77999999999999999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.12 Score=51.07 Aligned_cols=225 Identities=9% Similarity=0.054 Sum_probs=121.1
Q ss_pred CeEEEeeCCCcEEEEecccccccccccCCCc--------------cceEEEee---------cCCcEEEecCCCCCCcee
Q psy14815 24 TMISSCGEDKNIRLWVMVIREPYEKLHGLPV--------------ETSLRQLV---------EDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 24 ~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~--------------~~~~~~~~---------~~~~i~~w~~~~~~~~~~ 80 (479)
..++.++.+|.|.-+|.++|+.+-.+..... +..++... .++.+..+|..+....+.
T Consensus 111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~ 190 (488)
T cd00216 111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWR 190 (488)
T ss_pred CeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeE
Confidence 5777788899999999999988765543221 11222222 245566667765444444
Q ss_pred eeEEeccc--------------cC-CcE-EEEEECCCCCEEEEEECCC------------------eEEEEECCCCeEEE
Q psy14815 81 AKAILSDG--------------HQ-RTI-RETAWSPCGNFIASASFDA------------------TTAVWDKRSGQFEC 126 (479)
Q Consensus 81 ~~~~~~~~--------------~~-~~v-~~v~~~~~~~~l~t~~~dg------------------~i~iwd~~~~~~~~ 126 (479)
........ +. ..+ ...++.+.+..++.++.++ .|.-+|..+|+..-
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W 270 (488)
T cd00216 191 FYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKW 270 (488)
T ss_pred eeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEE
Confidence 33211000 00 011 1234444566777777655 79999999997443
Q ss_pred eEEEeCCCC----cEEEEEEc----CCCC---EEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEE
Q psy14815 127 NATLEGHEN----EVKSVTWS----KNGQ---FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILA 195 (479)
Q Consensus 127 ~~~~~~~~~----~v~~l~~~----~~~~---~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~ 195 (479)
......+.. ......+. -++. .++.++.+|.+..+|.++++..-..... ...+..+| ..+.
T Consensus 271 ~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~------~~~~~~~~--~~vy 342 (488)
T cd00216 271 FYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEV------EQPMAYDP--GLVY 342 (488)
T ss_pred EeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEee------ccccccCC--ceEE
Confidence 333222211 00001111 1333 5788889999999999998532211110 11123333 2222
Q ss_pred EE------------------EcCCcEEEEecCCcccceEeeeeecCCC----ccE--EEEEEccCCCEEEEeeCCCeEEE
Q psy14815 196 SA------------------SYDDTVKLFKEDKAEADWINFATLKSHT----STV--WSLAFDRIGSRLATCSDDATVKI 251 (479)
Q Consensus 196 ~~------------------~~dg~i~i~d~~~~~~~~~~~~~~~~~~----~~v--~~~~~~~~~~~l~s~~~dg~i~i 251 (479)
.+ ..+|.+.-.|..+++..|..-.....+. .+. ..+.. .+..++.++.||.|+.
T Consensus 343 v~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~--~g~~v~~g~~dG~l~a 420 (488)
T cd00216 343 LGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLAT--AGNLVFAGAADGYFRA 420 (488)
T ss_pred EccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEe--cCCeEEEECCCCeEEE
Confidence 22 2357788888888876554322100000 111 11222 3678888999999999
Q ss_pred EeccCCC
Q psy14815 252 WKEYKPG 258 (479)
Q Consensus 252 wd~~~~~ 258 (479)
+|..+++
T Consensus 421 ld~~tG~ 427 (488)
T cd00216 421 FDATTGK 427 (488)
T ss_pred EECCCCc
Confidence 9986553
|
The alignment model contains an 8-bladed beta-propeller. |
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.1 Score=48.89 Aligned_cols=161 Identities=14% Similarity=0.070 Sum_probs=74.3
Q ss_pred EEEECCCCCEEEEEEC------CCeEEEEECCCCeEEEeEEEeC---CCCcEEEEEEcCCCCEEEEEeC-----------
Q psy14815 95 ETAWSPCGNFIASASF------DATTAVWDKRSGQFECNATLEG---HENEVKSVTWSKNGQFLATCSR----------- 154 (479)
Q Consensus 95 ~v~~~~~~~~l~t~~~------dg~i~iwd~~~~~~~~~~~~~~---~~~~v~~l~~~~~~~~l~~~~~----------- 154 (479)
.+-.-|+|+.++++-. -|-+.+.|-++-+ .....+. ....-+.+-|.|..+.++|...
T Consensus 134 T~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~tf~--v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~ 211 (461)
T PF05694_consen 134 TVHCLPDGRIMISALGDADGNGPGGFVLLDGETFE--VKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFN 211 (461)
T ss_dssp EEEE-SS--EEEEEEEETTS-S--EEEEE-TTT----EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---
T ss_pred eeeecCCccEEEEeccCCCCCCCCcEEEEcCcccc--ccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCC
Confidence 3445578888887622 2567788877654 2222222 1234467778887777887652
Q ss_pred ---------CCcEEEEEeCCCCceeeeeeeecc--ccceeEEEEec--CCCEEEEEE-cCCcEEEEec-CCcccceEeee
Q psy14815 155 ---------DKSVWVWEVGEEDEYECAAVINAH--IQDVKKVRFHP--FDNILASAS-YDDTVKLFKE-DKAEADWINFA 219 (479)
Q Consensus 155 ---------dg~i~vwd~~~~~~~~~~~~~~~~--~~~v~~l~~~~--~~~~l~~~~-~dg~i~i~d~-~~~~~~~~~~~ 219 (479)
..++.+||+...+ .++.+.-- ......+.|.. +..+=++|+ -.+.|..|-- +.+.-..+.+.
T Consensus 212 ~~d~~~~~yG~~l~vWD~~~r~---~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi 288 (461)
T PF05694_consen 212 PEDLEAGKYGHSLHVWDWSTRK---LLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVI 288 (461)
T ss_dssp TTTHHHH-S--EEEEEETTTTE---EEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEE
T ss_pred hhHhhcccccCeEEEEECCCCc---EeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEE
Confidence 2579999999984 44444322 22345677754 444433333 3344444433 33221112222
Q ss_pred eecC-----------------CCccEEEEEEccCCCEEEEee-CCCeEEEEeccCCCCC
Q psy14815 220 TLKS-----------------HTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNS 260 (479)
Q Consensus 220 ~~~~-----------------~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~ 260 (479)
.+.. -..-|+.+..|.|.++|+... .+|.|+.||+..+.++
T Consensus 289 ~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~P 347 (461)
T PF05694_consen 289 DIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNP 347 (461)
T ss_dssp EE--EE--SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-
T ss_pred ECCCcccCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCC
Confidence 2211 134579999999999997655 6899999999877654
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.074 Score=51.29 Aligned_cols=137 Identities=18% Similarity=0.276 Sum_probs=71.4
Q ss_pred CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCC-------Cce-eeee
Q psy14815 102 GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE-------DEY-ECAA 173 (479)
Q Consensus 102 ~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~-------~~~-~~~~ 173 (479)
|.+|...+. +.|.+||+++++ .+..+... +|..+.|++++++++..+.+ .+.+++.+.. ... ....
T Consensus 117 G~LL~~~~~-~~i~~yDw~~~~--~i~~i~v~--~vk~V~Ws~~g~~val~t~~-~i~il~~~~~~~~~~~~~g~e~~f~ 190 (443)
T PF04053_consen 117 GNLLGVKSS-DFICFYDWETGK--LIRRIDVS--AVKYVIWSDDGELVALVTKD-SIYILKYNLEAVAAIPEEGVEDAFE 190 (443)
T ss_dssp SSSEEEEET-TEEEEE-TTT----EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEEEEE-HHHHHHBTTTB-GGGEE
T ss_pred CcEEEEECC-CCEEEEEhhHcc--eeeEEecC--CCcEEEEECCCCEEEEEeCC-eEEEEEecchhcccccccCchhceE
Confidence 777777765 489999999996 55666532 48999999999999988765 6777665432 000 0223
Q ss_pred eeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEe
Q psy14815 174 VINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 253 (479)
Q Consensus 174 ~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 253 (479)
........|.+.+|..+ .++-.+.. .++. +..+.. ..+..-..++.=+.+.+..+.++....|+.+..+.
T Consensus 191 ~~~E~~~~IkSg~W~~d--~fiYtT~~-~lkY--l~~Ge~-----~~i~~ld~~~yllgy~~~~~~ly~~Dr~~~v~~~~ 260 (443)
T PF04053_consen 191 LIHEISERIKSGCWVED--CFIYTTSN-HLKY--LVNGET-----GIIAHLDKPLYLLGYLPKENRLYLIDRDGNVISYE 260 (443)
T ss_dssp EEEEE-S--SEEEEETT--EEEEE-TT-EEEE--EETTEE-----EEEEE-SS--EEEEEETTTTEEEEE-TT--EEEEE
T ss_pred EEEEecceeEEEEEEcC--EEEEEcCC-eEEE--EEcCCc-----ceEEEcCCceEEEEEEccCCEEEEEECCCCEEEEE
Confidence 33333456888888754 44444443 5555 333321 22222234555566666666777777777777765
Q ss_pred c
Q psy14815 254 E 254 (479)
Q Consensus 254 ~ 254 (479)
+
T Consensus 261 l 261 (443)
T PF04053_consen 261 L 261 (443)
T ss_dssp -
T ss_pred E
Confidence 4
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.11 Score=47.52 Aligned_cols=226 Identities=12% Similarity=0.082 Sum_probs=121.6
Q ss_pred EECCCCC-EEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeee
Q psy14815 97 AWSPCGN-FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVI 175 (479)
Q Consensus 97 ~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 175 (479)
.|.++.. ++.+--..+.|.-|+..+++ ...+.. .+.+.++..-..+..|+++.. -+.+++.........+...
T Consensus 31 ~w~~~~~~L~w~DI~~~~i~r~~~~~g~---~~~~~~-p~~~~~~~~~d~~g~Lv~~~~--g~~~~~~~~~~~~t~~~~~ 104 (307)
T COG3386 31 VWDPDRGALLWVDILGGRIHRLDPETGK---KRVFPS-PGGFSSGALIDAGGRLIACEH--GVRLLDPDTGGKITLLAEP 104 (307)
T ss_pred cCcCCCCEEEEEeCCCCeEEEecCCcCc---eEEEEC-CCCcccceeecCCCeEEEEcc--ccEEEeccCCceeEEeccc
Confidence 4667666 44555567899999998774 223332 233455555444555555533 3555666544321121111
Q ss_pred e-cc-ccceeEEEEecCCCEEEEEEc-----------CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 176 N-AH-IQDVKKVRFHPFDNILASASY-----------DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 176 ~-~~-~~~v~~l~~~~~~~~l~~~~~-----------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
. .. ....+.+...|+|.+.++... -|.++.+|.. +. .......+-..-+.++||||++.|+.
T Consensus 105 ~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~-g~----~~~l~~~~~~~~NGla~SpDg~tly~ 179 (307)
T COG3386 105 EDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPD-GG----VVRLLDDDLTIPNGLAFSPDGKTLYV 179 (307)
T ss_pred cCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCC-CC----EEEeecCcEEecCceEECCCCCEEEE
Confidence 1 11 134567888898886665443 1334444432 22 13333444555678999999988877
Q ss_pred eeC-CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCC-eEEEcccCCCCCCCC
Q psy14815 243 CSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AIRIFKENPEAGDSD 320 (479)
Q Consensus 243 ~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg-~i~vw~~~~~~~~~~ 320 (479)
+.. .+.|.-|++....-. . ........+.. .....-.++...+|.+.+++..+| .|..|+.+ ++
T Consensus 180 aDT~~~~i~r~~~d~~~g~----~----~~~~~~~~~~~-~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~---- 245 (307)
T COG3386 180 ADTPANRIHRYDLDPATGP----I----GGRRGFVDFDE-EPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GK---- 245 (307)
T ss_pred EeCCCCeEEEEecCcccCc----c----CCcceEEEccC-CCCCCCceEEeCCCCEEEecccCCceEEEECCC-Cc----
Confidence 654 477888877531110 0 00011112212 234555677777888776555554 89999988 54
Q ss_pred ceeeEEEeccccccccceeEEEec-CCCCCCCcc
Q psy14815 321 MVSFDLVHTEHRAHNQDVNCVAWN-PVVPEPQKT 353 (479)
Q Consensus 321 ~~~~~~~~~~~~~h~~~v~~~~~s-p~~~~l~~~ 353 (479)
++... ......+++++|- |+.+.|...
T Consensus 246 -----l~~~i-~lP~~~~t~~~FgG~~~~~L~iT 273 (307)
T COG3386 246 -----LLGEI-KLPVKRPTNPAFGGPDLNTLYIT 273 (307)
T ss_pred -----EEEEE-ECCCCCCccceEeCCCcCEEEEE
Confidence 23332 2333566777774 455555433
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.015 Score=58.42 Aligned_cols=192 Identities=7% Similarity=0.086 Sum_probs=103.4
Q ss_pred CCCEEEEEECC------CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC-----cEEEEEeCCCCce
Q psy14815 101 CGNFIASASFD------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK-----SVWVWEVGEEDEY 169 (479)
Q Consensus 101 ~~~~l~t~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~ 169 (479)
++...+.||.+ ..+..||..++.+.....+.........+.+ +++..+.|+.++ .+..||..+. .+
T Consensus 303 ~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~~~~~~--~g~IYviGG~~~~~~~~sve~Ydp~~~-~W 379 (557)
T PHA02713 303 DNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLAVI--DDTIYAIGGQNGTNVERTIECYTMGDD-KW 379 (557)
T ss_pred CCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhceeEEEE--CCEEEEECCcCCCCCCceEEEEECCCC-eE
Confidence 55666777753 3578899988876544444322222222222 677778887754 4788998764 33
Q ss_pred eeeeeeeccccceeEEEEecCCCEEEEEEcCC-----------------------cEEEEecCCcccceEeeeeecCCCc
Q psy14815 170 ECAAVINAHIQDVKKVRFHPFDNILASASYDD-----------------------TVKLFKEDKAEADWINFATLKSHTS 226 (479)
Q Consensus 170 ~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg-----------------------~i~i~d~~~~~~~~~~~~~~~~~~~ 226 (479)
.....+.........+.+ ++++.+.|+.++ .+..||..+. .|..+..+.....
T Consensus 380 ~~~~~mp~~r~~~~~~~~--~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td--~W~~v~~m~~~r~ 455 (557)
T PHA02713 380 KMLPDMPIALSSYGMCVL--DQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNN--IWETLPNFWTGTI 455 (557)
T ss_pred EECCCCCcccccccEEEE--CCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCC--eEeecCCCCcccc
Confidence 333332222222222222 577788887653 4667777654 2443333322222
Q ss_pred cEEEEEEccCCCEEEEeeCCC------eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEE
Q psy14815 227 TVWSLAFDRIGSRLATCSDDA------TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT 300 (479)
Q Consensus 227 ~v~~~~~~~~~~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~ 300 (479)
....+.+ +++..+.|+.++ .+..||.... ..|..+..+... ......+.+ ++++.++
T Consensus 456 ~~~~~~~--~~~IYv~GG~~~~~~~~~~ve~Ydp~~~------------~~W~~~~~m~~~-r~~~~~~~~--~~~iyv~ 518 (557)
T PHA02713 456 RPGVVSH--KDDIYVVCDIKDEKNVKTCIFRYNTNTY------------NGWELITTTESR-LSALHTILH--DNTIMML 518 (557)
T ss_pred cCcEEEE--CCEEEEEeCCCCCCccceeEEEecCCCC------------CCeeEccccCcc-cccceeEEE--CCEEEEE
Confidence 2112222 355556666442 3566775320 235555544432 222222333 6788899
Q ss_pred EeCCC--eEEEcccCCCC
Q psy14815 301 ACGDD--AIRIFKENPEA 316 (479)
Q Consensus 301 ~~~dg--~i~vw~~~~~~ 316 (479)
|+.|| ++..||..+.+
T Consensus 519 Gg~~~~~~~e~yd~~~~~ 536 (557)
T PHA02713 519 HCYESYMLQDTFNVYTYE 536 (557)
T ss_pred eeecceeehhhcCccccc
Confidence 99888 78888888776
|
|
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.044 Score=49.67 Aligned_cols=174 Identities=14% Similarity=0.259 Sum_probs=91.7
Q ss_pred EecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCE
Q psy14815 69 LWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 148 (479)
Q Consensus 69 ~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~ 148 (479)
+|...+.+..+.... ......+..+.-+++|++++++..-....-||.-...+.+... .....|.+|.|.|++.+
T Consensus 126 iy~T~DgG~tW~~~~---~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r--~~~~riq~~gf~~~~~l 200 (302)
T PF14870_consen 126 IYRTTDGGKTWQAVV---SETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNR--NSSRRIQSMGFSPDGNL 200 (302)
T ss_dssp EEEESSTTSSEEEEE----S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE----SSS-EEEEEE-TTS-E
T ss_pred EEEeCCCCCCeeEcc---cCCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEcc--CccceehhceecCCCCE
Confidence 344444555555443 3445778899999999998888765566678865544433322 24578999999999876
Q ss_pred EEEEeCCCcEEEEEeC-CCCceee-eeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCc
Q psy14815 149 LATCSRDKSVWVWEVG-EEDEYEC-AAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTS 226 (479)
Q Consensus 149 l~~~~~dg~i~vwd~~-~~~~~~~-~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 226 (479)
.+.+ ..|.|+.=+.. ....+.. ..........+..++|.+++...++|+ .|.+ +...+.++ .|+.......-..
T Consensus 201 w~~~-~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg-~G~l-~~S~DgGk-tW~~~~~~~~~~~ 276 (302)
T PF14870_consen 201 WMLA-RGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGG-SGTL-LVSTDGGK-TWQKDRVGENVPS 276 (302)
T ss_dssp EEEE-TTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS-EEEEES-TT-E-EEESSTTS-S-EE-GGGTTSSS
T ss_pred EEEe-CCcEEEEccCCCCccccccccCCcccCceeeEEEEecCCCCEEEEeC-CccE-EEeCCCCc-cceECccccCCCC
Confidence 5544 88888887722 2211111 111112233478899998877666554 4433 44445444 5666555555667
Q ss_pred cEEEEEEccCCCEEEEeeCCCeEEEE
Q psy14815 227 TVWSLAFDRIGSRLATCSDDATVKIW 252 (479)
Q Consensus 227 ~v~~~~~~~~~~~l~s~~~dg~i~iw 252 (479)
.++.+.|..+.+-+ ..+.+|.|.-|
T Consensus 277 n~~~i~f~~~~~gf-~lG~~G~ll~~ 301 (302)
T PF14870_consen 277 NLYRIVFVNPDKGF-VLGQDGVLLRY 301 (302)
T ss_dssp ---EEEEEETTEEE-EE-STTEEEEE
T ss_pred ceEEEEEcCCCceE-EECCCcEEEEe
Confidence 78899998655444 45578887655
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.038 Score=55.40 Aligned_cols=147 Identities=9% Similarity=0.076 Sum_probs=80.1
Q ss_pred cEEEEEECCCCCEEEEEECC------------CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy14815 92 TIRETAWSPCGNFIASASFD------------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 159 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~ 159 (479)
..+.-.|+|+|..+++.... +.+.+.++..+... . ...+.|..+.|||||..++... +|.|.
T Consensus 398 ~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~--~---~~~g~Issl~wSpDG~RiA~i~-~g~v~ 471 (591)
T PRK13616 398 SLTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVA--S---RVPGPISELQLSRDGVRAAMII-GGKVY 471 (591)
T ss_pred CCCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhh--h---ccCCCcCeEEECCCCCEEEEEE-CCEEE
Confidence 37778899998888777533 22333344333211 1 2345799999999999888766 47776
Q ss_pred EE---EeCCCCceee--eeeeec-cccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEE
Q psy14815 160 VW---EVGEEDEYEC--AAVINA-HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF 233 (479)
Q Consensus 160 vw---d~~~~~~~~~--~~~~~~-~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~ 233 (479)
+- ....+. ... ...+.. -...+.++.|.+++.++ ++..++.-.+|.+.-...... ...-.....++..++-
T Consensus 472 Va~Vvr~~~G~-~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v~vDG~~~~-~~~~~n~~~~v~~vaa 548 (591)
T PRK13616 472 LAVVEQTEDGQ-YALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYVNLDGSNSD-ALPSRNLSAPVVAVAA 548 (591)
T ss_pred EEEEEeCCCCc-eeecccEEeecccCCccccceEecCCEEE-EEecCCCCceEEEecCCcccc-ccCCCCccCceEEEec
Confidence 63 322221 111 111222 22336789999988854 555555544554432221101 1011113556777776
Q ss_pred ccCCCEEEEeeCCCeE
Q psy14815 234 DRIGSRLATCSDDATV 249 (479)
Q Consensus 234 ~~~~~~l~s~~~dg~i 249 (479)
+++ .++....++.+
T Consensus 549 ~~~--~iyv~~~~g~~ 562 (591)
T PRK13616 549 SPS--TVYVTDARAVL 562 (591)
T ss_pred CCc--eEEEEcCCceE
Confidence 653 45556666633
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.052 Score=54.47 Aligned_cols=155 Identities=16% Similarity=0.095 Sum_probs=90.2
Q ss_pred CCcEEEEEECCCCCEEEEEE------CCC--eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC------
Q psy14815 90 QRTIRETAWSPCGNFIASAS------FDA--TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD------ 155 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~------~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d------ 155 (479)
...+...+++|+|+.++... .|. .|.+++.. +... ....+ ...+.-.|+|+|..+++....
T Consensus 349 ~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~~--~lt~g--~~~t~PsWspDG~~lw~v~dg~~~~~v 423 (591)
T PRK13616 349 MGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVAV--QVLEG--HSLTRPSWSLDADAVWVVVDGNTVVRV 423 (591)
T ss_pred ccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-Ccce--eeecC--CCCCCceECCCCCceEEEecCcceEEE
Confidence 34678999999999887766 233 55555653 2212 22232 237788999998877777543
Q ss_pred ------CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEE---EecCCcccceEeeeeecC-CC
Q psy14815 156 ------KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL---FKEDKAEADWINFATLKS-HT 225 (479)
Q Consensus 156 ------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i---~d~~~~~~~~~~~~~~~~-~~ 225 (479)
+.+.+.+++.+.. .. .....|..+.|+|||..++... +|.|.+ -....+.........+.. -.
T Consensus 424 ~~~~~~gql~~~~vd~ge~---~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~ 496 (591)
T PRK13616 424 IRDPATGQLARTPVDASAV---AS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLG 496 (591)
T ss_pred eccCCCceEEEEeccCchh---hh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccC
Confidence 1222223332211 00 2245799999999999888766 467766 332233211111122222 33
Q ss_pred ccEEEEEEccCCCEEEEeeCCCeEEEEeccCC
Q psy14815 226 STVWSLAFDRIGSRLATCSDDATVKIWKEYKP 257 (479)
Q Consensus 226 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 257 (479)
..+.++.|..++.. +.+..++.-.+|.+.-.
T Consensus 497 ~~~~~l~W~~~~~L-~V~~~~~~~~v~~v~vD 527 (591)
T PRK13616 497 DTAVSLDWRTGDSL-VVGRSDPEHPVWYVNLD 527 (591)
T ss_pred CccccceEecCCEE-EEEecCCCCceEEEecC
Confidence 34688999998875 46565665666765443
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.00059 Score=57.11 Aligned_cols=146 Identities=14% Similarity=0.068 Sum_probs=81.6
Q ss_pred EEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCcc
Q psy14815 148 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST 227 (479)
Q Consensus 148 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 227 (479)
.+...+.+|.|+-++++..+.. .+.-..+.....-+ .-+..+++|+.+|.|.+|........ ......-...
T Consensus 32 ~l~~~sa~~~v~~~~~~k~k~s--~rse~~~~e~~~v~---~~~~~~~vG~~dg~v~~~n~n~~g~~---~d~~~s~~e~ 103 (238)
T KOG2444|consen 32 LLRATSADGLVRERKVRKHKES--CRSERFIDEGQRVV---TASAKLMVGTSDGAVYVFNWNLEGAH---SDRVCSGEES 103 (238)
T ss_pred hhccccCCcccccchhhhhhhh--hhhhhhhhcceeec---ccCceEEeecccceEEEecCCccchH---HHhhhccccc
Confidence 3555567888888888754311 11111111111111 23467999999999999988732210 0001111222
Q ss_pred EE-EEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEE--eCC
Q psy14815 228 VW-SLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA--CGD 304 (479)
Q Consensus 228 v~-~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~--~~d 304 (479)
|. .+.-..++.+..+++.||.|+.|++... +.+....+|...++..+..+..+++++.+ |.|
T Consensus 104 i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~---------------k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d 168 (238)
T KOG2444|consen 104 IDLGIPNGRDSSLGCVGAQDGRIRACNIKPN---------------KVLGYVGQHNFESGEELIVVGSDEFLKIADTSHD 168 (238)
T ss_pred ceeccccccccceeEEeccCCceeeeccccC---------------ceeeeeccccCCCcceeEEecCCceEEeeccccc
Confidence 22 2222334557889999999999998443 22333444422555555556666666666 677
Q ss_pred CeEEEcccCCCC
Q psy14815 305 DAIRIFKENPEA 316 (479)
Q Consensus 305 g~i~vw~~~~~~ 316 (479)
..++.|++..-.
T Consensus 169 ~~~k~W~ve~~~ 180 (238)
T KOG2444|consen 169 RVLKKWNVEKIK 180 (238)
T ss_pred hhhhhcchhhhh
Confidence 777777776543
|
|
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.11 Score=45.67 Aligned_cols=169 Identities=9% Similarity=0.115 Sum_probs=107.5
Q ss_pred ccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 7 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
..|-...|.++.|+|+.+.|++..+...-.+|=...|+.+.++..
T Consensus 81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL----------------------------------- 125 (316)
T COG3204 81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPL----------------------------------- 125 (316)
T ss_pred cccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecc-----------------------------------
Confidence 445566699999999999998888777777776666666655421
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEE--------EeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcE
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE--------CNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 158 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~--------~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i 158 (479)
.+ -...-.+.+..++++.++--.++.+.++.+..+... .+......+.....++|.|..+.|+.+=.-.-+
T Consensus 126 ~g-~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~ 204 (316)
T COG3204 126 TG-FSDPETIEYIGGNQFVIVDERDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPI 204 (316)
T ss_pred cc-cCChhHeEEecCCEEEEEehhcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCc
Confidence 11 223344566666666666666777777765543210 111111224567899999988888888887888
Q ss_pred EEEEeCCCCceeeeeeeecc-------ccceeEEEEec-CCCEEEEEEcCCcEEEEecCCc
Q psy14815 159 WVWEVGEEDEYECAAVINAH-------IQDVKKVRFHP-FDNILASASYDDTVKLFKEDKA 211 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~~-------~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~ 211 (479)
.+|.+......-.......+ -..++++.|++ .+.+|+-+.+++.+.-.|....
T Consensus 205 ~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~G~ 265 (316)
T COG3204 205 GIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEFNAITNSLLVLSDESRRLLEVDLSGE 265 (316)
T ss_pred EEEEEecCCcccccccccCcccccceEeeccccceecCCCCcEEEEecCCceEEEEecCCC
Confidence 88887654311111111111 23477888987 5567777778888888887643
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.28 Score=47.60 Aligned_cols=116 Identities=22% Similarity=0.241 Sum_probs=71.4
Q ss_pred cEEEEEECCCCCEEEEE-ECCC----eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC----------
Q psy14815 92 TIRETAWSPCGNFIASA-SFDA----TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK---------- 156 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~-~~dg----~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg---------- 156 (479)
.+....++|++++++.+ +..| .++++|+++++... ..+... ....+.|.++++.|+....+.
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~-d~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~ 201 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLP-DGIENP--KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYP 201 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEE-EEEEEE--ESEEEEECTTSSEEEEEECSTTTSS-CCGCC
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcC-Cccccc--ccceEEEeCCCCEEEEEEeCcccccccCCCC
Confidence 44467899999998866 3333 69999999997432 232321 122499999988776665433
Q ss_pred -cEEEEEeCCCCceeeeeeeeccccc--eeEEEEecCCCEEEEEEcC----CcEEEEecCCc
Q psy14815 157 -SVWVWEVGEEDEYECAAVINAHIQD--VKKVRFHPFDNILASASYD----DTVKLFKEDKA 211 (479)
Q Consensus 157 -~i~vwd~~~~~~~~~~~~~~~~~~~--v~~l~~~~~~~~l~~~~~d----g~i~i~d~~~~ 211 (479)
.|..|.+.+...- -...+...... ...+..++++++|+..... ..+.+.|+...
T Consensus 202 ~~v~~~~~gt~~~~-d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~ 262 (414)
T PF02897_consen 202 RQVYRHKLGTPQSE-DELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDG 262 (414)
T ss_dssp EEEEEEETTS-GGG--EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCT
T ss_pred cEEEEEECCCChHh-CeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEecccc
Confidence 2677777665321 11223332222 5578889999988765533 34778888764
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0027 Score=39.35 Aligned_cols=34 Identities=24% Similarity=0.377 Sum_probs=30.0
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEecccccc
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREP 45 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~ 45 (479)
...|.+++|+|...+||.++.+|.|.++.+ +++.
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence 457999999999999999999999999998 4443
|
|
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.33 Score=46.13 Aligned_cols=34 Identities=12% Similarity=-0.004 Sum_probs=27.7
Q ss_pred CCccEEEEEEccCCCEEEEeeCCCeEEEEeccCC
Q psy14815 224 HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 257 (479)
Q Consensus 224 ~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 257 (479)
....+.+++.+|++++.++...=|.|.++|+...
T Consensus 306 ~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~ 339 (415)
T PF14655_consen 306 SKREGESICLSPSGRLAAVTDSLGRVLLIDVARG 339 (415)
T ss_pred CCceEEEEEECCCCCEEEEEcCCCcEEEEECCCC
Confidence 4456789999999988888777799999998654
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.32 Score=45.91 Aligned_cols=171 Identities=18% Similarity=0.138 Sum_probs=86.4
Q ss_pred eEEEEECCCCeEEEeEEE---eCCCCcEEEEEEcCCCCEEEEEeC--CC---cEEEEEeCCCCceeeeeeeeccccc---
Q psy14815 113 TTAVWDKRSGQFECNATL---EGHENEVKSVTWSKNGQFLATCSR--DK---SVWVWEVGEEDEYECAAVINAHIQD--- 181 (479)
Q Consensus 113 ~i~iwd~~~~~~~~~~~~---~~~~~~v~~l~~~~~~~~l~~~~~--dg---~i~vwd~~~~~~~~~~~~~~~~~~~--- 181 (479)
.+.|+|+.+++...+... ......+..+.|.++++.|+..-. +. .+.++|..++...... .......
T Consensus 159 ~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~--~e~~~~Wv~~ 236 (353)
T PF00930_consen 159 SLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVL--EETSDGWVDV 236 (353)
T ss_dssp EEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEE--EEESSSSSSS
T ss_pred EEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEE--EecCCcceee
Confidence 455677777753222222 233456889999999884444433 22 3666777665321111 1111222
Q ss_pred eeEEEEe-cCC-CEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEE-EEEccCCCEEE-EeeCC--CeEEEEecc
Q psy14815 182 VKKVRFH-PFD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWS-LAFDRIGSRLA-TCSDD--ATVKIWKEY 255 (479)
Q Consensus 182 v~~l~~~-~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~-s~~~d--g~i~iwd~~ 255 (479)
-....|. +++ .++.....+|.-+||-++.... ....+....-.|.. +.++++++.++ ++..+ +.-.+|.+.
T Consensus 237 ~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~---~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~ 313 (353)
T PF00930_consen 237 YDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGG---KPRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVS 313 (353)
T ss_dssp SSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSS---EEEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEE
T ss_pred ecccccccCCCCEEEEEEEcCCCcEEEEEccccc---ceeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEE
Confidence 2345554 554 4555556777655554443332 13455555666754 67788877654 55442 344555443
Q ss_pred CC-CCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeC
Q psy14815 256 KP-GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 303 (479)
Q Consensus 256 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~ 303 (479)
.. . .....+....... ..+.|||++++++..+.
T Consensus 314 ~~~~--------------~~~~~LT~~~~~~-~~~~~Spdg~y~v~~~s 347 (353)
T PF00930_consen 314 LDSG--------------GEPKCLTCEDGDH-YSASFSPDGKYYVDTYS 347 (353)
T ss_dssp TTET--------------TEEEESSTTSSTT-EEEEE-TTSSEEEEEEE
T ss_pred eCCC--------------CCeEeccCCCCCc-eEEEECCCCCEEEEEEc
Confidence 22 1 1122333221112 68999999998776543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.14 Score=44.79 Aligned_cols=237 Identities=14% Similarity=0.169 Sum_probs=123.0
Q ss_pred cceEEEEEC-CCCCe-EEEeeCCCcEEEEecccccccccccCCCccceEE-EeecCCc-EEEecCCCCCCceeeeE---E
Q psy14815 12 GRVWNVSWN-PQGTM-ISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLR-QLVEDKN-IRLWGKESFGNKFTAKA---I 84 (479)
Q Consensus 12 ~~V~~l~~s-~~~~~-l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~-i~~w~~~~~~~~~~~~~---~ 84 (479)
+++..-+|. +||++ .++.+.+|.+. ..+.-...-.-+..+|....-+ ..-.-++ ..++|............ .
T Consensus 35 qavfasaf~~~dgs~g~a~~~eaGk~v-~~~~lpaR~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~R 113 (366)
T COG3490 35 QAVFASAFDARDGSFGAATLSEAGKIV-FATALPARGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGR 113 (366)
T ss_pred cchheeeeeccCCceeEEEEccCCcee-eeeecccccCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCc
Confidence 445555554 57775 55667777653 2222222222333344433333 3333333 44566654322221111 1
Q ss_pred eccccCCcEEEEEECCCCCEEEEEECC-----CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC----
Q psy14815 85 LSDGHQRTIRETAWSPCGNFIASASFD-----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD---- 155 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~~~~l~t~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d---- 155 (479)
.+.+|. .|||||.+|...-.| |.|-|||.+.+ +..+-.+..|.-....+.|.+||+.++.+...
T Consensus 114 HfyGHG------vfs~dG~~LYATEndfd~~rGViGvYd~r~~-fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIeth 186 (366)
T COG3490 114 HFYGHG------VFSPDGRLLYATENDFDPNRGVIGVYDAREG-FQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETH 186 (366)
T ss_pred eeeccc------ccCCCCcEEEeecCCCCCCCceEEEEecccc-cceecccccCCcCcceeEEecCCcEEEEeCCceecc
Confidence 123333 689999998876443 78999999844 45677788888788899999999988876431
Q ss_pred ---C-----------cEEEEEeCCCCceeeeeeee--ccccceeEEEEecCCCEEEEEEcCCc-----EEEEecCCcccc
Q psy14815 156 ---K-----------SVWVWEVGEEDEYECAAVIN--AHIQDVKKVRFHPFDNILASASYDDT-----VKLFKEDKAEAD 214 (479)
Q Consensus 156 ---g-----------~i~vwd~~~~~~~~~~~~~~--~~~~~v~~l~~~~~~~~l~~~~~dg~-----i~i~d~~~~~~~ 214 (479)
| ++.+.|..+++.++ ..++. .+...++.++..++|..++.+-..|. -.+=-...++.
T Consensus 187 pdfgR~~lNldsMePSlvlld~atG~lie-kh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~- 264 (366)
T COG3490 187 PDFGRTELNLDSMEPSLVLLDAATGNLIE-KHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEP- 264 (366)
T ss_pred cccCccccchhhcCccEEEEeccccchhh-hccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCc-
Confidence 1 22333333332111 11222 34456778888887776554433221 00000111110
Q ss_pred eEee----eeecCCCccEEEEEEccCCCEEEEeeC-CCeEEEEeccCCC
Q psy14815 215 WINF----ATLKSHTSTVWSLAFDRIGSRLATCSD-DATVKIWKEYKPG 258 (479)
Q Consensus 215 ~~~~----~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~ 258 (479)
.+.+ .+.......|-+++.+.+...++..+- -+...+||..++.
T Consensus 265 l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~ 313 (366)
T COG3490 265 LEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGA 313 (366)
T ss_pred CcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCc
Confidence 0000 011112345677888766666655554 4567899985553
|
|
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.033 Score=52.68 Aligned_cols=145 Identities=10% Similarity=0.080 Sum_probs=94.9
Q ss_pred CCCEE-EEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCC-------EEEEEeCCCcEEEEEeCCCCceeee
Q psy14815 101 CGNFI-ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ-------FLATCSRDKSVWVWEVGEEDEYECA 172 (479)
Q Consensus 101 ~~~~l-~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-------~l~~~~~dg~i~vwd~~~~~~~~~~ 172 (479)
+.++| .++.....++-.|++.|+. +...+-+.. |.-+.+.|+.+ .-+.|-.|..|.-||.|-... ..+
T Consensus 344 dsnlil~~~~~~~~l~klDIE~GKI--VeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~-~kl 419 (644)
T KOG2395|consen 344 DSNLILMDGGEQDKLYKLDIERGKI--VEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGK-NKL 419 (644)
T ss_pred ccceEeeCCCCcCcceeeeccccee--eeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCc-cee
Confidence 44444 3445556788889999974 444443433 77777777543 245666788899999985432 112
Q ss_pred eeeecc----ccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCe
Q psy14815 173 AVINAH----IQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 248 (479)
Q Consensus 173 ~~~~~~----~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~ 248 (479)
.....| .....|.+-..+ -++++|+.+|.|++||.- +. .....+.+...+|..+..+.+|++|+..+ +..
T Consensus 420 ~~~q~kqy~~k~nFsc~aTT~s-G~IvvgS~~GdIRLYdri-~~---~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~ty 493 (644)
T KOG2395|consen 420 AVVQSKQYSTKNNFSCFATTES-GYIVVGSLKGDIRLYDRI-GR---RAKTALPGLGDAIKHVDVTADGKWILATC-KTY 493 (644)
T ss_pred eeeeccccccccccceeeecCC-ceEEEeecCCcEEeehhh-hh---hhhhcccccCCceeeEEeeccCcEEEEec-ccE
Confidence 222222 123445554444 479999999999999973 22 23455778889999999999999987554 667
Q ss_pred EEEEecc
Q psy14815 249 VKIWKEY 255 (479)
Q Consensus 249 i~iwd~~ 255 (479)
+.+.++.
T Consensus 494 LlLi~t~ 500 (644)
T KOG2395|consen 494 LLLIDTL 500 (644)
T ss_pred EEEEEEe
Confidence 7777764
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.047 Score=54.80 Aligned_cols=147 Identities=10% Similarity=0.087 Sum_probs=83.3
Q ss_pred CCCEEEEEECCC-----eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC-------------------
Q psy14815 101 CGNFIASASFDA-----TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK------------------- 156 (479)
Q Consensus 101 ~~~~l~t~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg------------------- 156 (479)
++...+.||.++ ++..||..++++.....+.........+.. ++...+.|+.++
T Consensus 351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~--~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~ 428 (557)
T PHA02713 351 DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVL--DQYIYIIGGRTEHIDYTSVHHMNSIDMEEDT 428 (557)
T ss_pred CCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEE--CCEEEEEeCCCcccccccccccccccccccc
Confidence 566777777653 588999999887655544432222222222 577777777543
Q ss_pred ----cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCC------cEEEEecCCcccceEeeeeecCCCc
Q psy14815 157 ----SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD------TVKLFKEDKAEADWINFATLKSHTS 226 (479)
Q Consensus 157 ----~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~~~~ 226 (479)
.+..||..+. .+..+..+....... +++ .-++++.+.|+.++ .+..||..+. ..|..+..+.....
T Consensus 429 ~~~~~ve~YDP~td-~W~~v~~m~~~r~~~-~~~-~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~-~~W~~~~~m~~~r~ 504 (557)
T PHA02713 429 HSSNKVIRYDTVNN-IWETLPNFWTGTIRP-GVV-SHKDDIYVVCDIKDEKNVKTCIFRYNTNTY-NGWELITTTESRLS 504 (557)
T ss_pred cccceEEEECCCCC-eEeecCCCCcccccC-cEE-EECCEEEEEeCCCCCCccceeEEEecCCCC-CCeeEccccCcccc
Confidence 4677887764 233333222111111 122 22467777777542 3677888761 13555555554444
Q ss_pred cEEEEEEccCCCEEEEeeCCC--eEEEEecc
Q psy14815 227 TVWSLAFDRIGSRLATCSDDA--TVKIWKEY 255 (479)
Q Consensus 227 ~v~~~~~~~~~~~l~s~~~dg--~i~iwd~~ 255 (479)
....+.+ +++..++|+.++ .+..||..
T Consensus 505 ~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~ 533 (557)
T PHA02713 505 ALHTILH--DNTIMMLHCYESYMLQDTFNVY 533 (557)
T ss_pred cceeEEE--CCEEEEEeeecceeehhhcCcc
Confidence 4444444 477788888888 56666653
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.27 Score=43.80 Aligned_cols=159 Identities=11% Similarity=0.105 Sum_probs=92.3
Q ss_pred cEEEEEEcCCCCEEEEEe-CCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEe-cCCccc
Q psy14815 136 EVKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK-EDKAEA 213 (479)
Q Consensus 136 ~v~~l~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d-~~~~~~ 213 (479)
.+.+.+++++++.++... .++.-.+|-.......... +. ...++.-.|++++...+....+...+++. ...+..
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~--~~--g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~ 100 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPV--LT--GGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTG 100 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceee--cc--CCccccccccCCCCEEEEEcCCCceEEEEecCCCcc
Confidence 688999999999776665 2333334444433222221 12 23677889999987777766666667664 233332
Q ss_pred ceEeeeeecCCCccEEEEEEccCCCEEEEee---CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEE
Q psy14815 214 DWINFATLKSHTSTVWSLAFDRIGSRLATCS---DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS 290 (479)
Q Consensus 214 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 290 (479)
....+.. ..-...|..+.+||||..++... .++.|.+--+.....-... ........... ....+.+++
T Consensus 101 ~~~~v~~-~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~------~l~~~~~~~~~-~~~~v~~v~ 172 (253)
T PF10647_consen 101 EPVEVDW-PGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPR------RLTGPRRVAPP-LLSDVTDVA 172 (253)
T ss_pred eeEEecc-cccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcc------eeccceEeccc-ccCcceeee
Confidence 1111111 11112899999999999887665 3577877766443322000 00011222222 256899999
Q ss_pred ecCCCCeEEEEeCCCe
Q psy14815 291 WCHLTDLIATACGDDA 306 (479)
Q Consensus 291 ~~~~~~~l~~~~~dg~ 306 (479)
|.+++.+++.+...+.
T Consensus 173 W~~~~~L~V~~~~~~~ 188 (253)
T PF10647_consen 173 WSDDSTLVVLGRSAGG 188 (253)
T ss_pred ecCCCEEEEEeCCCCC
Confidence 9999988777655443
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.007 Score=61.85 Aligned_cols=102 Identities=19% Similarity=0.183 Sum_probs=73.8
Q ss_pred CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeecccc
Q psy14815 101 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ 180 (479)
Q Consensus 101 ~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 180 (479)
.+..++.|+..|.+...|+.+. ..+...-+.-.++|++++|+.+|..++.|-.+|.|.+||+..+ +..+.+..|..
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~n-L~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~---k~l~~i~e~~a 173 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGN-LGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRA---KILKVITEHGA 173 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcc-cchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCC---cceeeeeecCC
Confidence 4567888998999999887653 1122233334679999999999999999999999999999988 44455555555
Q ss_pred ceeEE---EEecCCCEEEEEEcCCcEEEEec
Q psy14815 181 DVKKV---RFHPFDNILASASYDDTVKLFKE 208 (479)
Q Consensus 181 ~v~~l---~~~~~~~~l~~~~~dg~i~i~d~ 208 (479)
+.+++ .+..++..++++...|. +|.+
T Consensus 174 p~t~vi~v~~t~~nS~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 174 PVTGVIFVGRTSQNSKLLTSDTGGS--FWKL 202 (1206)
T ss_pred ccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence 55544 34445667888877776 5554
|
|
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.11 Score=52.23 Aligned_cols=192 Identities=13% Similarity=0.206 Sum_probs=110.3
Q ss_pred CCCCEEEEEECC------CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-C-----cEEEEEeCCCC
Q psy14815 100 PCGNFIASASFD------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-K-----SVWVWEVGEED 167 (479)
Q Consensus 100 ~~~~~l~t~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-g-----~i~vwd~~~~~ 167 (479)
..+.+++.|+.+ ..+..+|..++.+.....+..... -.+++.. ++...++|+.| | ++..||.+..+
T Consensus 283 ~~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~-~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~ 360 (571)
T KOG4441|consen 283 VSGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRC-RVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQ 360 (571)
T ss_pred CCCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccc-cccEEEE-CCEEEEEccccCCCcccceEEEecCCCCc
Confidence 345677777776 378899999987776666653333 3344444 46788888888 3 57788888764
Q ss_pred ceeeeeeeeccccceeEEEEecCCCEEEEEEcCCc-----EEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 168 EYECAAVINAHIQDVKKVRFHPFDNILASASYDDT-----VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~-----i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
+.....+...........+ +|.+.++|+.||. |-.||..+.+ |..+..+...........+ +|...++
T Consensus 361 -W~~~a~M~~~R~~~~v~~l--~g~iYavGG~dg~~~l~svE~YDp~~~~--W~~va~m~~~r~~~gv~~~--~g~iYi~ 433 (571)
T KOG4441|consen 361 -WTPVAPMNTKRSDFGVAVL--DGKLYAVGGFDGEKSLNSVECYDPVTNK--WTPVAPMLTRRSGHGVAVL--GGKLYII 433 (571)
T ss_pred -eeccCCccCccccceeEEE--CCEEEEEeccccccccccEEEecCCCCc--ccccCCCCcceeeeEEEEE--CCEEEEE
Confidence 4444444333322222222 5888999998875 7778777543 3333333222223333333 4667777
Q ss_pred eeCCC------eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCC-----eEEEcc
Q psy14815 243 CSDDA------TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD-----AIRIFK 311 (479)
Q Consensus 243 ~~~dg------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg-----~i~vw~ 311 (479)
||.++ ++..||... ..|..+..+... ........ -++.+.+.|+.|+ +|..||
T Consensus 434 GG~~~~~~~l~sve~YDP~t-------------~~W~~~~~M~~~-R~~~g~a~--~~~~iYvvGG~~~~~~~~~VE~yd 497 (571)
T KOG4441|consen 434 GGGDGSSNCLNSVECYDPET-------------NTWTLIAPMNTR-RSGFGVAV--LNGKIYVVGGFDGTSALSSVERYD 497 (571)
T ss_pred cCcCCCccccceEEEEcCCC-------------CceeecCCcccc-cccceEEE--ECCEEEEECCccCCCccceEEEEc
Confidence 77554 456666532 334444433332 11111122 2567778888776 367788
Q ss_pred cCCCC
Q psy14815 312 ENPEA 316 (479)
Q Consensus 312 ~~~~~ 316 (479)
..+.+
T Consensus 498 p~~~~ 502 (571)
T KOG4441|consen 498 PETNQ 502 (571)
T ss_pred CCCCc
Confidence 77765
|
|
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.48 Score=42.89 Aligned_cols=149 Identities=10% Similarity=0.106 Sum_probs=89.6
Q ss_pred CCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeee-----
Q psy14815 100 PCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAV----- 174 (479)
Q Consensus 100 ~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~----- 174 (479)
..++.|+.|+.+| +.+++..... ...... +...|..+...++-+.+++-+ |+.+.++++...........
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~-~~~~i~--~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~ 79 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPS-KPTRIL--KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPK 79 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCc-cceeEe--ecceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccccc
Confidence 3578999999988 8999983221 122222 223499999999877776664 49999999976533221100
Q ss_pred ------eeccccceeEEE--EecCCCEEEEEEcCCcEEEEecCCcccce-EeeeeecCCCccEEEEEEccCCCEEEEeeC
Q psy14815 175 ------INAHIQDVKKVR--FHPFDNILASASYDDTVKLFKEDKAEADW-INFATLKSHTSTVWSLAFDRIGSRLATCSD 245 (479)
Q Consensus 175 ------~~~~~~~v~~l~--~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 245 (479)
.......+...+ -...+...++......|.+|........+ ....++. -...+.+++|. ++.++.|..
T Consensus 80 ~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~--~~~i~v~~~ 156 (275)
T PF00780_consen 80 SRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFL--GNKICVGTS 156 (275)
T ss_pred cccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEe--CCEEEEEeC
Confidence 011122333333 11233444444455689999887653333 3344443 34778899998 567777765
Q ss_pred CCeEEEEeccCC
Q psy14815 246 DATVKIWKEYKP 257 (479)
Q Consensus 246 dg~i~iwd~~~~ 257 (479)
++ ..+.|+.+.
T Consensus 157 ~~-f~~idl~~~ 167 (275)
T PF00780_consen 157 KG-FYLIDLNTG 167 (275)
T ss_pred Cc-eEEEecCCC
Confidence 54 788888744
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.15 Score=50.86 Aligned_cols=123 Identities=11% Similarity=0.212 Sum_probs=78.6
Q ss_pred ceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEc--cCCCEEEEeeCCCeEEEEeccCCC
Q psy14815 181 DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD--RIGSRLATCSDDATVKIWKEYKPG 258 (479)
Q Consensus 181 ~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~s~~~dg~i~iwd~~~~~ 258 (479)
..+-+.-+.-++.-++-+....+.|||.+.+.... -..+ ...+.|.++.|. |+++.+++.+-...|.+|......
T Consensus 31 ~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~--~~~f-~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~d 107 (631)
T PF12234_consen 31 NPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEY--EESF-SEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYD 107 (631)
T ss_pred CcceEeecccCcEEEEECCCCEEEEEEcCCcEEEE--eeee-cCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchh
Confidence 34445555545544454455679999999766422 2222 457789999984 688999999999999999753322
Q ss_pred CCCCCCCCCCCCceEEEEEE--eccccccEEEEEecCCCCeEEEEeCCCeEEEcccCC
Q psy14815 259 NSAGIPTPDNDSVWKCVCTL--SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 314 (479)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~ 314 (479)
.... .+.|.++..+ ..+...+|.+..|.++|.+++.+ ++.+.|++-.-
T Consensus 108 y~~~------~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv~dk~~ 157 (631)
T PF12234_consen 108 YTNK------GPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLFVFDKWL 157 (631)
T ss_pred hhcC------CcccceeEEEEeecCCCCCccceeEecCCeEEEEe--CCEEEEECCCc
Confidence 1111 1334444443 34445689999999999766544 35788887543
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.015 Score=36.00 Aligned_cols=32 Identities=19% Similarity=0.333 Sum_probs=29.2
Q ss_pred ccCCcEEEEEECCCCCEEEEEECCCeEEEEEC
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFDATTAVWDK 119 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~ 119 (479)
.....|.+++|+|..+++|.++.+|.|.++.+
T Consensus 9 ~l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl 40 (47)
T PF12894_consen 9 NLPSRVSCMSWCPTMDLIALGTEDGEVLVYRL 40 (47)
T ss_pred CCCCcEEEEEECCCCCEEEEEECCCeEEEEEC
Confidence 34567999999999999999999999999998
|
|
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.013 Score=59.90 Aligned_cols=102 Identities=15% Similarity=0.138 Sum_probs=72.9
Q ss_pred CCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCC
Q psy14815 145 NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSH 224 (479)
Q Consensus 145 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 224 (479)
.+..++.|+..|.+...|++..- .....-..-.++|++++|+.+|.+++.|-.+|.|.+||...++. .+.+..|
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL--~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~----l~~i~e~ 171 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNL--GPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKI----LKVITEH 171 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhccc--chhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcc----eeeeeec
Confidence 45678999999999999988741 22223334467899999999999999999999999999997664 4445444
Q ss_pred CccEEE---EEEccCCCEEEEeeCCCeEEEEec
Q psy14815 225 TSTVWS---LAFDRIGSRLATCSDDATVKIWKE 254 (479)
Q Consensus 225 ~~~v~~---~~~~~~~~~l~s~~~dg~i~iwd~ 254 (479)
..+.+. +.+..++..++++..-|. +|.+
T Consensus 172 ~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 172 GAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKL 202 (1206)
T ss_pred CCccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence 444443 334445556777777775 5654
|
|
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.17 Score=48.95 Aligned_cols=122 Identities=12% Similarity=0.119 Sum_probs=78.6
Q ss_pred cccCCcEEEEEECCC----CCEEEEEECCCeEEEEECC-----CCeEEEeEEEeCCC-C--cEEEEEEcCCCCEEEEEeC
Q psy14815 87 DGHQRTIRETAWSPC----GNFIASASFDATTAVWDKR-----SGQFECNATLEGHE-N--EVKSVTWSKNGQFLATCSR 154 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~----~~~l~t~~~dg~i~iwd~~-----~~~~~~~~~~~~~~-~--~v~~l~~~~~~~~l~~~~~ 154 (479)
.+.-.-|..+.|.|- ...+........|.||.+. ++++....+.+-.+ - --..+.|+|....|++-..
T Consensus 53 iGqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~ 132 (671)
T PF15390_consen 53 IGQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTA 132 (671)
T ss_pred eeccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEec
Confidence 355678999999984 3456666667899999875 23332222222111 1 1246789999888888777
Q ss_pred CCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcC-CcEEEEecCC
Q psy14815 155 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD-DTVKLFKEDK 210 (479)
Q Consensus 155 dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-g~i~i~d~~~ 210 (479)
...-.+++++.... +....+ ...+-|.|.+|.+||+.|+.+-.. =.-++||-..
T Consensus 133 ~dvSV~~sV~~d~s-rVkaDi-~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~q 187 (671)
T PF15390_consen 133 RDVSVLPSVHCDSS-RVKADI-KTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQ 187 (671)
T ss_pred CceeEeeeeeeCCc-eEEEec-cCCceEEEEEecCcCCEEEEEeCCeEEEEEecCch
Confidence 66656777776543 222233 345679999999999888776543 2357787553
|
|
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=96.48 E-value=1.3 Score=45.76 Aligned_cols=306 Identities=8% Similarity=0.049 Sum_probs=156.9
Q ss_pred ccceEEEEECCC--C----CeEEEeeCCCcEEEEe-cccccccccc--c-----------CC-CccceEEEeecCCcEEE
Q psy14815 11 QGRVWNVSWNPQ--G----TMISSCGEDKNIRLWV-MVIREPYEKL--H-----------GL-PVETSLRQLVEDKNIRL 69 (479)
Q Consensus 11 ~~~V~~l~~s~~--~----~~l~t~~~dg~v~iwd-~~~~~~~~~~--~-----------~~-~~~~~~~~~~~~~~i~~ 69 (479)
...|.|+.++|- + ++++.|.++..+.+-- ..+...+... . .. .+...+..+..||.+.-
T Consensus 530 e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~ 609 (1096)
T KOG1897|consen 530 EYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILITHEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALLY 609 (1096)
T ss_pred cceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCcceeeeeccCCCccchheeeEEeeccceEEEEEcCCceEEE
Confidence 467999999984 2 2788888776655443 2222221111 0 01 22566777888888877
Q ss_pred ecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEE-EEEEcC--CC
Q psy14815 70 WGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVK-SVTWSK--NG 146 (479)
Q Consensus 70 w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~-~l~~~~--~~ 146 (479)
+.++.............. -..++.--.|+..++.-+.+..|.-..+|.-+. + .....+.- ..+. .+.|+. -+
T Consensus 610 fv~d~~tg~lsd~Kk~~l-Gt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~n~-k-Lv~spls~--kev~~~c~f~s~a~~ 684 (1096)
T KOG1897|consen 610 FVLDINTGQLSDRKKVTL-GTQPISLRTFSSKSRTAVFALSDRPTVIYSSNG-K-LVYSPLSL--KEVNHMCPFNSDAYP 684 (1096)
T ss_pred EEEEcccceEcccccccc-CCCCcEEEEEeeCCceEEEEeCCCCEEEEecCC-c-EEEeccch--HHhhhhcccccccCC
Confidence 766543333222221111 234555556665554444455566666665433 2 12222211 1111 222332 22
Q ss_pred CEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcC--------------CcEEEEecCCcc
Q psy14815 147 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD--------------DTVKLFKEDKAE 212 (479)
Q Consensus 147 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d--------------g~i~i~d~~~~~ 212 (479)
..++++ ..+.+++..+..-++.. .++..- ....+.+++.+....+++.+.. ..++++|-.+.+
T Consensus 685 d~l~~~-~~~~l~i~tid~iqkl~-irtvpl-~~~prrI~~q~~sl~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf~ 761 (1096)
T KOG1897|consen 685 DSLASA-NGGALTIGTIDEIQKLH-IRTVPL-GESPRRICYQESSLTFGVLSNRIESSAEYYGEEYEVSFLRVLDQNTFE 761 (1096)
T ss_pred ceEEEe-cCCceEEEEecchhhcc-eeeecC-CCChhheEecccceEEEEEecccccchhhcCCcceEEEEEEecCCcee
Confidence 345555 44677787776543322 222222 2345667777644444444321 125666655432
Q ss_pred cceEeeeeecC--CCccEEEEEEccC-CCEEEEee----------CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEe
Q psy14815 213 ADWINFATLKS--HTSTVWSLAFDRI-GSRLATCS----------DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS 279 (479)
Q Consensus 213 ~~~~~~~~~~~--~~~~v~~~~~~~~-~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (479)
. .....+.. ....+.++.|..| +.+++.|+ ..|.|.++......+ .+.+....
T Consensus 762 v--l~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~------------L~~v~e~~ 827 (1096)
T KOG1897|consen 762 V--LSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNS------------LELVAETV 827 (1096)
T ss_pred E--EeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCc------------eeeeeeee
Confidence 1 11111111 1123455568766 67777775 246777777654211 12233222
Q ss_pred ccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 280 GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 280 ~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
. .+.+.++.- -+|+++|.- ...|++|++...+ .......+..++..+...-.+..++.+
T Consensus 828 v--~Gav~aL~~-fngkllA~I--n~~vrLye~t~~~----------eLr~e~~~~~~~~aL~l~v~gdeI~Vg 886 (1096)
T KOG1897|consen 828 V--KGAVYALVE-FNGKLLAGI--NQSVRLYEWTTER----------ELRIECNISNPIIALDLQVKGDEIAVG 886 (1096)
T ss_pred e--ccceeehhh-hCCeEEEec--CcEEEEEEccccc----------eehhhhcccCCeEEEEEEecCcEEEEe
Confidence 2 334555432 256666644 5799999998885 233334677788888888777777555
|
|
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.69 Score=43.12 Aligned_cols=221 Identities=13% Similarity=0.028 Sum_probs=103.0
Q ss_pred EECCCCCEEEEEEC-C--CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeee
Q psy14815 97 AWSPCGNFIASASF-D--ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA 173 (479)
Q Consensus 97 ~~~~~~~~l~t~~~-d--g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 173 (479)
+|.++|+.|+.++. | ..+.+.|+.+++..++....+ .......++++.+.++-......++-.|+++.+. ..
T Consensus 42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g--~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~---~~ 116 (386)
T PF14583_consen 42 CFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPG--DNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEE---RV 116 (386)
T ss_dssp -B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS---B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--E---EE
T ss_pred CcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCC--CCccceEEecCCCeEEEEECCCeEEEEECCcCcE---EE
Confidence 57788877766655 4 467777999997444333221 2222456778888877665667888899998743 22
Q ss_pred eeeccccceeEEEEe--cCCCEEEEEEc----------------------CCcEEEEecCCcccceEeeeeecCCCccEE
Q psy14815 174 VINAHIQDVKKVRFH--PFDNILASASY----------------------DDTVKLFKEDKAEADWINFATLKSHTSTVW 229 (479)
Q Consensus 174 ~~~~~~~~v~~l~~~--~~~~~l~~~~~----------------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~ 229 (479)
.+......+-...|. .++..++-.-. ...|.-.|+.+++. ..+..-...+.
T Consensus 117 vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~-----~~v~~~~~wlg 191 (386)
T PF14583_consen 117 VYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGER-----KVVFEDTDWLG 191 (386)
T ss_dssp EEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--E-----EEEEEESS-EE
T ss_pred EEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCce-----eEEEecCcccc
Confidence 333334444445553 34454432211 12244445555442 22222345677
Q ss_pred EEEEccCCCEEEEeeC----CCe-EEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEE---
Q psy14815 230 SLAFDRIGSRLATCSD----DAT-VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA--- 301 (479)
Q Consensus 230 ~~~~~~~~~~l~s~~~----dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~--- 301 (479)
.+.|+|....+++-+. +.. -|||-++...... +++..- .....+..=-|.|||..|.--
T Consensus 192 H~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~-----------~~v~~~--~~~e~~gHEfw~~DG~~i~y~~~~ 258 (386)
T PF14583_consen 192 HVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNV-----------KKVHRR--MEGESVGHEFWVPDGSTIWYDSYT 258 (386)
T ss_dssp EEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS--------------EESS-----TTEEEEEEEE-TTSS-EEEEEEE
T ss_pred CcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcc-----------eeeecC--CCCcccccccccCCCCEEEEEeec
Confidence 8899997766655443 332 4778776443211 111111 013344445688888765442
Q ss_pred --eCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCc
Q psy14815 302 --CGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 302 --~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~ 352 (479)
+.+..|.-++..+++ ...+ ........+.-++||++++-
T Consensus 259 ~~~~~~~i~~~d~~t~~----------~~~~--~~~p~~~H~~ss~Dg~L~vG 299 (386)
T PF14583_consen 259 PGGQDFWIAGYDPDTGE----------RRRL--MEMPWCSHFMSSPDGKLFVG 299 (386)
T ss_dssp TTT--EEEEEE-TTT------------EEEE--EEE-SEEEEEE-TTSSEEEE
T ss_pred CCCCceEEEeeCCCCCC----------ceEE--EeCCceeeeEEcCCCCEEEe
Confidence 224456667777765 1111 11223456777899988743
|
|
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.051 Score=51.50 Aligned_cols=139 Identities=12% Similarity=0.160 Sum_probs=90.5
Q ss_pred CCCeEE-EeeCCCcEEEEecccccccccccCCCc----------------cceEEEeecCCcEEEecCCCCCCc-eeeeE
Q psy14815 22 QGTMIS-SCGEDKNIRLWVMVIREPYEKLHGLPV----------------ETSLRQLVEDKNIRLWGKESFGNK-FTAKA 83 (479)
Q Consensus 22 ~~~~l~-t~~~dg~v~iwd~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~ 83 (479)
+.++|+ ++.....+.--|++.|+.+.......+ ...-+.+.+++.+.-||.+-.+.. .....
T Consensus 344 dsnlil~~~~~~~~l~klDIE~GKIVeEWk~~~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q 423 (644)
T KOG2395|consen 344 DSNLILMDGGEQDKLYKLDIERGKIVEEWKFEDDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQ 423 (644)
T ss_pred ccceEeeCCCCcCcceeeecccceeeeEeeccCCcceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeee
Confidence 444444 445555677777887777665544322 233445667888999998854432 11111
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
...........|.+-..+| ++++|+.+|.|++||- .+. .....+++-..+|..+..+.+|++++..+ +..+.+-++
T Consensus 424 ~kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~-~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlLi~t 499 (644)
T KOG2395|consen 424 SKQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDR-IGR-RAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLLIDT 499 (644)
T ss_pred ccccccccccceeeecCCc-eEEEeecCCcEEeehh-hhh-hhhhcccccCCceeeEEeeccCcEEEEec-ccEEEEEEE
Confidence 1112234556676666565 8999999999999997 443 25567888889999999999999877654 456666665
Q ss_pred C
Q psy14815 164 G 164 (479)
Q Consensus 164 ~ 164 (479)
.
T Consensus 500 ~ 500 (644)
T KOG2395|consen 500 L 500 (644)
T ss_pred e
Confidence 4
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.012 Score=49.43 Aligned_cols=106 Identities=11% Similarity=0.121 Sum_probs=66.1
Q ss_pred CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEE-EEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccc
Q psy14815 101 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV-TWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI 179 (479)
Q Consensus 101 ~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l-~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 179 (479)
-+..+++|+.+|.|.+|+...-... ...+..-...+.++ .-..++.+..+++.||.|+.|++.-. +.+.....|.
T Consensus 69 ~~~~~~vG~~dg~v~~~n~n~~g~~-~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~---k~~g~~g~h~ 144 (238)
T KOG2444|consen 69 ASAKLMVGTSDGAVYVFNWNLEGAH-SDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPN---KVLGYVGQHN 144 (238)
T ss_pred cCceEEeecccceEEEecCCccchH-HHhhhcccccceeccccccccceeEEeccCCceeeeccccC---ceeeeecccc
Confidence 3467899999999999987622101 11111112223222 22235668999999999999999876 3444444555
Q ss_pred -cceeEEEEecCCCEEEEE--EcCCcEEEEecCC
Q psy14815 180 -QDVKKVRFHPFDNILASA--SYDDTVKLFKEDK 210 (479)
Q Consensus 180 -~~v~~l~~~~~~~~l~~~--~~dg~i~i~d~~~ 210 (479)
.++.....+..+++++++ +.|..++.|++..
T Consensus 145 ~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 145 FESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred CCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence 455555555556666666 6777777777764
|
|
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.37 Score=42.63 Aligned_cols=166 Identities=14% Similarity=0.241 Sum_probs=107.4
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCC
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 166 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~ 166 (479)
.+-...+.++.|+|+.+.|++......-.|+=...|+......+.+- .....+.+..++++.++--.++.+.++.+...
T Consensus 82 ~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~-~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~ 160 (316)
T COG3204 82 LGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGF-SDPETIEYIGGNQFVIVDERDRALYLFTVDAD 160 (316)
T ss_pred ccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEeccccc-CChhHeEEecCCEEEEEehhcceEEEEEEcCC
Confidence 34556699999999999888888777777776667775545555543 34567888888888887778888988888765
Q ss_pred Cceeeee-------eeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCC-------CccEEEEE
Q psy14815 167 DEYECAA-------VINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSH-------TSTVWSLA 232 (479)
Q Consensus 167 ~~~~~~~-------~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-------~~~v~~~~ 232 (479)
....... ...........++|+|....|+.+-+-.-+.||........ ........+ -..|.++.
T Consensus 161 t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~-l~~~~~~~~~~~~~~f~~DvSgl~ 239 (316)
T COG3204 161 TTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSS-LSVHASLDPTADRDLFVLDVSGLE 239 (316)
T ss_pred ccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcc-cccccccCcccccceEeeccccce
Confidence 3211111 11112445778999999988988888887888877643311 001111111 23467788
Q ss_pred EccCCCEE-EEeeCCCeEEEEec
Q psy14815 233 FDRIGSRL-ATCSDDATVKIWKE 254 (479)
Q Consensus 233 ~~~~~~~l-~s~~~dg~i~iwd~ 254 (479)
|++..+.| +-+.+++.+.-.|.
T Consensus 240 ~~~~~~~LLVLS~ESr~l~Evd~ 262 (316)
T COG3204 240 FNAITNSLLVLSDESRRLLEVDL 262 (316)
T ss_pred ecCCCCcEEEEecCCceEEEEec
Confidence 88755544 44556666666665
|
|
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.44 Score=45.29 Aligned_cols=150 Identities=10% Similarity=0.155 Sum_probs=82.7
Q ss_pred CCcEEEEEECCCCCEEEEEE-----------CCC-eEEEEECCC--CeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy14815 90 QRTIRETAWSPCGNFIASAS-----------FDA-TTAVWDKRS--GQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 155 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~-----------~dg-~i~iwd~~~--~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d 155 (479)
-.....|+|.++|+++++-. ..+ .|.+++-.. ++......+...-.....+++.+++ |++++..
T Consensus 13 ~~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G--lyV~~~~ 90 (367)
T TIGR02604 13 LRNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG--VYVATPP 90 (367)
T ss_pred cCCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC--EEEeCCC
Confidence 35677899999998777653 223 787776543 3333334444334456889999888 4445444
Q ss_pred CcEEEEEeCCCC----cee-eeeeeec----cccceeEEEEecCCCEEEEEEcC-------------------CcEEEEe
Q psy14815 156 KSVWVWEVGEED----EYE-CAAVINA----HIQDVKKVRFHPFDNILASASYD-------------------DTVKLFK 207 (479)
Q Consensus 156 g~i~vwd~~~~~----~~~-~~~~~~~----~~~~v~~l~~~~~~~~l~~~~~d-------------------g~i~i~d 207 (479)
...++.|..... ..+ .+..+.. +......++|.|+|.+.++-+.. |.|.-++
T Consensus 91 ~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~ 170 (367)
T TIGR02604 91 DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYN 170 (367)
T ss_pred eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEe
Confidence 333333543221 111 1222222 23447789999999876655421 3344455
Q ss_pred cCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCC
Q psy14815 208 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD 246 (479)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 246 (479)
...... +.+ ..++ .....++|+++|+.+++-..+
T Consensus 171 pdg~~~--e~~--a~G~-rnp~Gl~~d~~G~l~~tdn~~ 204 (367)
T TIGR02604 171 PDGGKL--RVV--AHGF-QNPYGHSVDSWGDVFFCDNDD 204 (367)
T ss_pred cCCCeE--EEE--ecCc-CCCccceECCCCCEEEEccCC
Confidence 443321 111 1222 334688999999887664433
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=96.22 E-value=1 Score=41.96 Aligned_cols=250 Identities=10% Similarity=0.069 Sum_probs=117.3
Q ss_pred ceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCc
Q psy14815 13 RVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRT 92 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 92 (479)
.-+.|+|.|||+++++ ...|.|++++ ..+.....+.. .. .........
T Consensus 3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~--------------------~~----------~v~~~~~~g 50 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVAD--------------------LP----------EVFADGERG 50 (331)
T ss_dssp SEEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE---------------------T----------TTBTSTTBS
T ss_pred CceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecc--------------------cc----------cccccccCC
Confidence 4578999999987775 5699999998 33322111100 00 001234567
Q ss_pred EEEEEECCC---CCEEEEEEC-C--------CeEEEEECCCC--eE----EEeEEEeC---CCCcEEEEEEcCCCCEEEE
Q psy14815 93 IRETAWSPC---GNFIASASF-D--------ATTAVWDKRSG--QF----ECNATLEG---HENEVKSVTWSKNGQFLAT 151 (479)
Q Consensus 93 v~~v~~~~~---~~~l~t~~~-d--------g~i~iwd~~~~--~~----~~~~~~~~---~~~~v~~l~~~~~~~~l~~ 151 (479)
...++++|+ ..+|..... . ..|.-|....+ .. ..+..+.. ....-..|.|.|||.+.++
T Consensus 51 llgia~~p~f~~n~~lYv~~t~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs 130 (331)
T PF07995_consen 51 LLGIAFHPDFASNGYLYVYYTNADEDGGDNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVS 130 (331)
T ss_dssp EEEEEE-TTCCCC-EEEEEEEEE-TSSSSEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEE
T ss_pred cccceeccccCCCCEEEEEEEcccCCCCCcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEE
Confidence 888999884 234333322 1 23444444333 11 11122222 2345567999999976665
Q ss_pred EeCCC-------------cEEEEEeCCCC----ce-----eeeeee-eccccceeEEEEecC-CCEEEEE-EcCCcEEEE
Q psy14815 152 CSRDK-------------SVWVWEVGEED----EY-----ECAAVI-NAHIQDVKKVRFHPF-DNILASA-SYDDTVKLF 206 (479)
Q Consensus 152 ~~~dg-------------~i~vwd~~~~~----~~-----~~~~~~-~~~~~~v~~l~~~~~-~~~l~~~-~~dg~i~i~ 206 (479)
.+..+ .|.-.+....- .. .....+ .++. ....++|+|. ++++++= +.++.=.|.
T Consensus 131 ~G~~~~~~~~~~~~~~~G~ilri~~dG~~p~dnP~~~~~~~~~~i~A~GlR-N~~~~~~d~~tg~l~~~d~G~~~~dein 209 (331)
T PF07995_consen 131 VGDGGNDDNAQDPNSLRGKILRIDPDGSIPADNPFVGDDGADSEIYAYGLR-NPFGLAFDPNTGRLWAADNGPDGWDEIN 209 (331)
T ss_dssp EB-TTTGGGGCSTTSSTTEEEEEETTSSB-TTSTTTTSTTSTTTEEEE--S-EEEEEEEETTTTEEEEEEE-SSSSEEEE
T ss_pred eCCCCCcccccccccccceEEEecccCcCCCCCccccCCCceEEEEEeCCC-ccccEEEECCCCcEEEEccCCCCCcEEE
Confidence 54432 33333322210 00 000111 1222 2457999998 5544432 122222222
Q ss_pred ecCCccc-------------------------ceEeeeeecCCCccEEEEEEcc-------CCCEEEEeeCCCeEEEEec
Q psy14815 207 KEDKAEA-------------------------DWINFATLKSHTSTVWSLAFDR-------IGSRLATCSDDATVKIWKE 254 (479)
Q Consensus 207 d~~~~~~-------------------------~~~~~~~~~~~~~~v~~~~~~~-------~~~~l~s~~~dg~i~iwd~ 254 (479)
-+..+.. ...+...+..| ..+..+.|-. .+.++++.-..+.|....+
T Consensus 210 ~i~~G~nYGWP~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~ 288 (331)
T PF07995_consen 210 RIEPGGNYGWPYCEGGPKYSGPPIGDAPSCPGFVPPVFAYPPH-SAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDL 288 (331)
T ss_dssp EE-TT-B--TTTBSSSCSTTSS-ECTGSS-TTS---SEEETTT---EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEE
T ss_pred EeccCCcCCCCCCcCCCCCCCCccccccCCCCcCccceeecCc-cccCceEEECCccCccccCcEEEecCCCCEEEEEee
Confidence 2221110 00123333434 4566677753 3445555555567777666
Q ss_pred cCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEE
Q psy14815 255 YKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIR 308 (479)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~ 308 (479)
..... ......+.......+.++++.|||.++++...+|.|+
T Consensus 289 ~~~~~------------~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 289 DEDGS------------VTEEEEFLGGFGGRPRDVAQGPDGALYVSDDSDGKIY 330 (331)
T ss_dssp ETTEE------------EEEEEEECTTSSS-EEEEEEETTSEEEEEE-TTTTEE
T ss_pred ecCCC------------ccceEEccccCCCCceEEEEcCCCeEEEEECCCCeEe
Confidence 43211 1112222233355799999999999988888888764
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=96.15 E-value=1.2 Score=42.04 Aligned_cols=121 Identities=14% Similarity=0.256 Sum_probs=60.6
Q ss_pred cEEEEEECCCCCEEEEEE--------------------CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC--CCE-
Q psy14815 92 TIRETAWSPCGNFIASAS--------------------FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQF- 148 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~--------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~- 148 (479)
--..+-|.|..+.++|.. ...++.+||+.+.+......+......+..+.|..+ ..+
T Consensus 182 ~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~g 261 (461)
T PF05694_consen 182 FGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYG 261 (461)
T ss_dssp ----EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EE
T ss_pred CCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccce
Confidence 344555666666666643 236899999999985544444432334667777654 334
Q ss_pred EEEEeCCCcEEEEEeCCCCceeeeeeeec-------------------cccceeEEEEecCCCEEEEEE-cCCcEEEEec
Q psy14815 149 LATCSRDKSVWVWEVGEEDEYECAAVINA-------------------HIQDVKKVRFHPFDNILASAS-YDDTVKLFKE 208 (479)
Q Consensus 149 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-------------------~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~ 208 (479)
++.+...++|..|--.....+.......- -..-|+.|..|.|.++|...+ ..|.|+.||+
T Consensus 262 Fvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDI 341 (461)
T PF05694_consen 262 FVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDI 341 (461)
T ss_dssp EEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-
T ss_pred EEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEec
Confidence 33333455565555433333322222111 123478999999999888776 5899999999
Q ss_pred CCcc
Q psy14815 209 DKAE 212 (479)
Q Consensus 209 ~~~~ 212 (479)
....
T Consensus 342 SDP~ 345 (461)
T PF05694_consen 342 SDPF 345 (461)
T ss_dssp SSTT
T ss_pred CCCC
Confidence 8755
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=96.15 E-value=1 Score=41.06 Aligned_cols=160 Identities=14% Similarity=0.266 Sum_probs=78.6
Q ss_pred eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCC
Q psy14815 131 EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK 210 (479)
Q Consensus 131 ~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~ 210 (479)
..-.+.+..+.-+++|+++++++......-||--.. .+.... ......|..+.|.|++.+.+.+ ..|.|++=+...
T Consensus 141 ~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~-~w~~~~--r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~ 216 (302)
T PF14870_consen 141 SETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQT-TWQPHN--RNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPD 216 (302)
T ss_dssp -S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-S-S-EEEE----SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TT
T ss_pred cCCcceeEeEEECCCCcEEEEECcccEEEEecCCCc-cceEEc--cCccceehhceecCCCCEEEEe-CCcEEEEccCCC
Confidence 445577889999999998888866555556664332 222222 2235679999999998766644 888888887332
Q ss_pred cccceEe-eeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEE
Q psy14815 211 AEADWIN-FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI 289 (479)
Q Consensus 211 ~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 289 (479)
....|.. +..+......+..++|.+++...++|+ .|.+.+ ....+ ++|+....... ....++.+
T Consensus 217 ~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg-~G~l~~-S~DgG------------ktW~~~~~~~~-~~~n~~~i 281 (302)
T PF14870_consen 217 DGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGG-SGTLLV-STDGG------------KTWQKDRVGEN-VPSNLYRI 281 (302)
T ss_dssp EEEEE---B-TTSS--S-EEEEEESSSS-EEEEES-TT-EEE-ESSTT------------SS-EE-GGGTT-SSS---EE
T ss_pred CccccccccCCcccCceeeEEEEecCCCCEEEEeC-CccEEE-eCCCC------------ccceECccccC-CCCceEEE
Confidence 2222221 112223344589999998877666555 554433 22222 33433322222 24568888
Q ss_pred EecCCCCeEEEEeCCCeEEEc
Q psy14815 290 SWCHLTDLIATACGDDAIRIF 310 (479)
Q Consensus 290 ~~~~~~~~l~~~~~dg~i~vw 310 (479)
.|.++.+-++.| .+|.|-=|
T Consensus 282 ~f~~~~~gf~lG-~~G~ll~~ 301 (302)
T PF14870_consen 282 VFVNPDKGFVLG-QDGVLLRY 301 (302)
T ss_dssp EEEETTEEEEE--STTEEEEE
T ss_pred EEcCCCceEEEC-CCcEEEEe
Confidence 888766656655 57776433
|
|
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=1.1 Score=41.76 Aligned_cols=156 Identities=11% Similarity=0.192 Sum_probs=89.2
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEE-EECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAV-WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~i-wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 168 (479)
...+.++.+.|++.+++++. .|.+.. ++-....+... ...-...++++.+.++++.++++ ..|.+++=..+.+..
T Consensus 172 ~g~~~~i~~~~~g~~v~~g~-~G~i~~s~~~gg~tW~~~--~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~s 247 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAVSS-RGNFYSTWEPGQTAWTPH--QRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLES 247 (334)
T ss_pred cceEEEEEECCCCeEEEEeC-CceEEEEcCCCCCeEEEe--eCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCc
Confidence 45788999999887666554 465443 23222233322 22344678999999998876665 557665323444444
Q ss_pred eeeeeee-eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCC
Q psy14815 169 YECAAVI-NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 247 (479)
Q Consensus 169 ~~~~~~~-~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 247 (479)
+...... ......+..+.+.|++..++ ++.+|.+. ...+.++ .|........-....+.+.|..+++.++ .+..|
T Consensus 248 W~~~~~~~~~~~~~l~~v~~~~~~~~~~-~G~~G~v~-~S~d~G~-tW~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~G 323 (334)
T PRK13684 248 WSKPIIPEITNGYGYLDLAYRTPGEIWA-GGGNGTLL-VSKDGGK-TWEKDPVGEEVPSNFYKIVFLDPEKGFV-LGQRG 323 (334)
T ss_pred cccccCCccccccceeeEEEcCCCCEEE-EcCCCeEE-EeCCCCC-CCeECCcCCCCCcceEEEEEeCCCceEE-ECCCc
Confidence 3322211 11223577889998777555 45566554 3334333 4444332222334678888876666655 55688
Q ss_pred eEEEEe
Q psy14815 248 TVKIWK 253 (479)
Q Consensus 248 ~i~iwd 253 (479)
.|..|+
T Consensus 324 ~il~~~ 329 (334)
T PRK13684 324 VLLRYV 329 (334)
T ss_pred eEEEec
Confidence 888776
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.98 Score=40.29 Aligned_cols=151 Identities=16% Similarity=0.173 Sum_probs=89.6
Q ss_pred ceEEEEECCCCCeEEEee-CCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC
Q psy14815 13 RVWNVSWNPQGTMISSCG-EDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR 91 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 91 (479)
.+.+.+++++++.++... .++.-.+|-...+...... ....
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~--------------------------------------~~g~ 66 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPV--------------------------------------LTGG 66 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceee--------------------------------------ccCC
Confidence 688999999999877665 2333444433222221111 0223
Q ss_pred cEEEEEECCCCCEEEEEECCCeEEEEE-CCCCeEEEeEEEeCC--CCcEEEEEEcCCCCEEEEEe---CCCcEEEEEeCC
Q psy14815 92 TIRETAWSPCGNFIASASFDATTAVWD-KRSGQFECNATLEGH--ENEVKSVTWSKNGQFLATCS---RDKSVWVWEVGE 165 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~dg~i~iwd-~~~~~~~~~~~~~~~--~~~v~~l~~~~~~~~l~~~~---~dg~i~vwd~~~ 165 (479)
.+..-.|++++...+....+...+++. ..+++... ..+... ...|.++.++|||..++.-. .++.|.+--+..
T Consensus 67 ~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~-~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r 145 (253)
T PF10647_consen 67 SLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEP-VEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVR 145 (253)
T ss_pred ccccccccCCCCEEEEEcCCCceEEEEecCCCccee-EEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEe
Confidence 677778999977666666666666663 33443221 122211 12899999999999887766 346777766543
Q ss_pred CCce------eeeeeeeccccceeEEEEecCCCEEEEEEcCCc
Q psy14815 166 EDEY------ECAAVINAHIQDVKKVRFHPFDNILASASYDDT 202 (479)
Q Consensus 166 ~~~~------~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~ 202 (479)
...- ............++.+.|.+++.+++.+...+.
T Consensus 146 ~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~~~ 188 (253)
T PF10647_consen 146 DGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGRSAGG 188 (253)
T ss_pred CCCCCcceeccceEecccccCcceeeeecCCCEEEEEeCCCCC
Confidence 2111 111122233457899999999887777665443
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >COG5276 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.98 Score=39.98 Aligned_cols=159 Identities=11% Similarity=0.092 Sum_probs=102.3
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCccc
Q psy14815 134 ENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA 213 (479)
Q Consensus 134 ~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 213 (479)
.+-+..+.++ +++.+.+..+.-++++|+.+.........+... +--.++.. .|++...+..+.-..+.|+..+..
T Consensus 86 ~~l~~Dv~vs--e~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~-gyaygv~v--sGn~aYVadlddgfLivdvsdpss 160 (370)
T COG5276 86 RDLFADVRVS--EEYVYVADWSSGLRIVDISTPDSPTLIGFLNTD-GYAYGVYV--SGNYAYVADLDDGFLIVDVSDPSS 160 (370)
T ss_pred hhhhheeEec--ccEEEEEcCCCceEEEeccCCCCcceeccccCC-ceEEEEEe--cCCEEEEeeccCcEEEEECCCCCC
Confidence 3456667775 567888888888999999988655544444331 22334444 488888888677788899987663
Q ss_pred ceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC
Q psy14815 214 DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 293 (479)
Q Consensus 214 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~ 293 (479)
+............-..++.| |++-..+..|+-+.+-|+..+.++ ..+..... +..+.++..++
T Consensus 161 -P~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sP------------vli~~~n~--g~g~~sv~vsd 223 (370)
T COG5276 161 -PQLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSP------------VLIGSYNT--GPGTYSVSVSD 223 (370)
T ss_pred -ceeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCC------------eEEEEEec--CCceEEEEecC
Confidence 23333333334444667776 777777888999999999777654 22333332 33688888888
Q ss_pred CCCeEEEEeCCCeEEEcccCCCC
Q psy14815 294 LTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 294 ~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+..+++... .-+.+-|....+
T Consensus 224 nr~y~vvy~--egvlivd~s~~s 244 (370)
T COG5276 224 NRAYLVVYD--EGVLIVDVSGPS 244 (370)
T ss_pred CeeEEEEcc--cceEEEecCCCC
Confidence 776666553 344555555543
|
|
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.37 Score=48.18 Aligned_cols=123 Identities=11% Similarity=0.231 Sum_probs=78.6
Q ss_pred EEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEe--cCCCEEEEEEcCCcEEE
Q psy14815 128 ATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH--PFDNILASASYDDTVKL 205 (479)
Q Consensus 128 ~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~~~l~~~~~dg~i~i 205 (479)
..+...-....-+.-+.-++..++-+....+.|||.+... .+....+ .....|..+.|. |+++.+++.+..+.|.+
T Consensus 23 ~~~~T~i~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~-lE~~~~f-~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l 100 (631)
T PF12234_consen 23 STFETGISNPSLISGSSIKKIAVVDSSRSELTIWDTRSGV-LEYEESF-SEDDPIRDLDWTSTPDGQSILAVGFPHHVLL 100 (631)
T ss_pred EEEecCCCCcceEeecccCcEEEEECCCCEEEEEEcCCcE-EEEeeee-cCCCceeeceeeecCCCCEEEEEEcCcEEEE
Confidence 3444333445555555555544454455679999998763 2333333 446789999986 58888999899999998
Q ss_pred Eec-----CCcccceEeeeee--cCCC-ccEEEEEEccCCCEEEEeeCCCeEEEEec
Q psy14815 206 FKE-----DKAEADWINFATL--KSHT-STVWSLAFDRIGSRLATCSDDATVKIWKE 254 (479)
Q Consensus 206 ~d~-----~~~~~~~~~~~~~--~~~~-~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 254 (479)
|.- ....+.|.++..+ ..++ .+|.+..|.++|..++.+ .+.+.|+|-
T Consensus 101 ~~Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv~dk 155 (631)
T PF12234_consen 101 YTQLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLFVFDK 155 (631)
T ss_pred EEccchhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEe--CCEEEEECC
Confidence 854 2333344444433 3343 679999999988765544 356888874
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.17 Score=47.24 Aligned_cols=143 Identities=12% Similarity=0.128 Sum_probs=87.9
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEee
Q psy14815 139 SVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 218 (479)
Q Consensus 139 ~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 218 (479)
.+-|. |.+..+.+...|.+.-|-+.....-.+...-....++|.++.|++|.+.|++--.+.+|.+++....+......
T Consensus 27 gvFfD-DaNkqlfavrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~ 105 (657)
T KOG2377|consen 27 GVFFD-DANKQLFAVRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYT 105 (657)
T ss_pred ceeec-cCcceEEEEecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHH
Confidence 34444 33333334445666667666544222222233445689999999999999999999999999985444322333
Q ss_pred eeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeE
Q psy14815 219 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI 298 (479)
Q Consensus 219 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l 298 (479)
.+.+.....|....|+.+ .-++..+..| +.+|-.....+ .++..+.+ ...|.-..|+++...+
T Consensus 106 ~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pekr--------------slRlVks~-~~nvnWy~yc~et~v~ 168 (657)
T KOG2377|consen 106 QECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPEKR--------------SLRLVKSH-NLNVNWYMYCPETAVI 168 (657)
T ss_pred HHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchhhh--------------hhhhhhhc-ccCccEEEEccccceE
Confidence 444455667899999865 5666666555 77776633322 12333333 5567777788876644
Q ss_pred E
Q psy14815 299 A 299 (479)
Q Consensus 299 ~ 299 (479)
.
T Consensus 169 L 169 (657)
T KOG2377|consen 169 L 169 (657)
T ss_pred e
Confidence 3
|
|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.8 Score=45.29 Aligned_cols=188 Identities=10% Similarity=0.027 Sum_probs=94.7
Q ss_pred CCCEEEEEECC-----CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC--CcEEEEEeCCCCceeeee
Q psy14815 101 CGNFIASASFD-----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD--KSVWVWEVGEEDEYECAA 173 (479)
Q Consensus 101 ~~~~l~t~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d--g~i~vwd~~~~~~~~~~~ 173 (479)
++..++.|+.+ ..+..||..++++.....+.........+. -++...+.|+.+ ..+..||...+ .+....
T Consensus 271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v~--~~~~iYviGG~~~~~sve~ydp~~n-~W~~~~ 347 (480)
T PHA02790 271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVP--ANNKLYVVGGLPNPTSVERWFHGDA-AWVNMP 347 (480)
T ss_pred CCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEEE--ECCEEEEECCcCCCCceEEEECCCC-eEEECC
Confidence 34556777654 357789999887665554433222222222 367777777754 35778887653 333333
Q ss_pred eeeccccceeEEEEecCCCEEEEEEcCC---cEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEE
Q psy14815 174 VINAHIQDVKKVRFHPFDNILASASYDD---TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 250 (479)
Q Consensus 174 ~~~~~~~~v~~l~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 250 (479)
.+.........+. -++++.+.|+.++ .+..||.++. .|.....+.........+++ +++..+.|+ .+.
T Consensus 348 ~l~~~r~~~~~~~--~~g~IYviGG~~~~~~~ve~ydp~~~--~W~~~~~m~~~r~~~~~~~~--~~~IYv~GG---~~e 418 (480)
T PHA02790 348 SLLKPRCNPAVAS--INNVIYVIGGHSETDTTTEYLLPNHD--QWQFGPSTYYPHYKSCALVF--GRRLFLVGR---NAE 418 (480)
T ss_pred CCCCCCcccEEEE--ECCEEEEecCcCCCCccEEEEeCCCC--EEEeCCCCCCccccceEEEE--CCEEEEECC---ceE
Confidence 3322111112222 2577778887653 4677887643 34433333222222222222 355555553 466
Q ss_pred EEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC-----CeEEEcccCCCC
Q psy14815 251 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD-----DAIRIFKENPEA 316 (479)
Q Consensus 251 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d-----g~i~vw~~~~~~ 316 (479)
+||... ..|..+..+... ......+. -++++.+.|+.+ .++..||..+++
T Consensus 419 ~ydp~~-------------~~W~~~~~m~~~-r~~~~~~v--~~~~IYviGG~~~~~~~~~ve~Yd~~~~~ 473 (480)
T PHA02790 419 FYCESS-------------NTWTLIDDPIYP-RDNPELII--VDNKLLLIGGFYRGSYIDTIEVYNNRTYS 473 (480)
T ss_pred EecCCC-------------CcEeEcCCCCCC-ccccEEEE--ECCEEEEECCcCCCcccceEEEEECCCCe
Confidence 777532 344444333221 11122222 256777777754 356677766654
|
|
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.16 Score=52.87 Aligned_cols=147 Identities=12% Similarity=-0.040 Sum_probs=90.0
Q ss_pred CcEEEEEECCCCCEEEEEEC--CCeEEEEECCCCeE---EEeEEEeC------CCCcEEEEEEcCCC-CEEEEEeCCCcE
Q psy14815 91 RTIRETAWSPCGNFIASASF--DATTAVWDKRSGQF---ECNATLEG------HENEVKSVTWSKNG-QFLATCSRDKSV 158 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~--dg~i~iwd~~~~~~---~~~~~~~~------~~~~v~~l~~~~~~-~~l~~~~~dg~i 158 (479)
-++..+...+|+...++... +-.|..||+++-.. +....+.. ......++.|+|.- ...++...|+.|
T Consensus 101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl 180 (1405)
T KOG3630|consen 101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSL 180 (1405)
T ss_pred ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccch
Confidence 45556666677655544433 33788899864321 11111211 22456688898843 346777789999
Q ss_pred EEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC-CCccEEEEEEccCC
Q psy14815 159 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS-HTSTVWSLAFDRIG 237 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~ 237 (479)
++..+..... ....+ ......++++|+|.|+.++.|...|++.-|...-... ..+..... ....|.+++|-...
T Consensus 181 ~V~~~~~~~~--~v~s~-p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik--~~ip~Pp~~e~yrvl~v~Wl~t~ 255 (1405)
T KOG3630|consen 181 RVKSTKQLAQ--NVTSF-PVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIK--SEIPEPPVEENYRVLSVTWLSTQ 255 (1405)
T ss_pred hhhhhhhhhh--hhccc-CcccceeeEEeccccceeeEecCCCeEEEeeccccee--ecccCCCcCCCcceeEEEEecce
Confidence 9988765421 11111 2345689999999999999999999999887653211 00111111 14679999998776
Q ss_pred CEEEE
Q psy14815 238 SRLAT 242 (479)
Q Consensus 238 ~~l~s 242 (479)
.++++
T Consensus 256 eflvv 260 (1405)
T KOG3630|consen 256 EFLVV 260 (1405)
T ss_pred eEEEE
Confidence 66654
|
|
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.84 E-value=1.2 Score=39.29 Aligned_cols=105 Identities=17% Similarity=0.162 Sum_probs=69.4
Q ss_pred cEEEEEECCCC-CEEEEEECCCe-EEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEEEeC
Q psy14815 92 TIRETAWSPCG-NFIASASFDAT-TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVWVWEVG 164 (479)
Q Consensus 92 ~v~~v~~~~~~-~~l~t~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~vwd~~ 164 (479)
....++++|.. .-++.+-.-|+ ..++|..+.+......-.......-.-.|||||.+|+..-.| |.|-+||.+
T Consensus 69 R~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r 148 (366)
T COG3490 69 RGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAR 148 (366)
T ss_pred ccCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecc
Confidence 34457788854 45566655554 567888877522211111111111233699999999887554 679999998
Q ss_pred CCCceeeeeeeeccccceeEEEEecCCCEEEEEE
Q psy14815 165 EEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 198 (479)
Q Consensus 165 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~ 198 (479)
.. ++.+..+..|.-.-..+.+.+||+.++.+.
T Consensus 149 ~~--fqrvgE~~t~GiGpHev~lm~DGrtlvvan 180 (366)
T COG3490 149 EG--FQRVGEFSTHGIGPHEVTLMADGRTLVVAN 180 (366)
T ss_pred cc--cceecccccCCcCcceeEEecCCcEEEEeC
Confidence 54 466777888888888999999999988764
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.57 Score=47.18 Aligned_cols=191 Identities=10% Similarity=0.105 Sum_probs=93.0
Q ss_pred CCCEEEEEECCC------eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEEEeCCCCce
Q psy14815 101 CGNFIASASFDA------TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVWVWEVGEEDEY 169 (479)
Q Consensus 101 ~~~~l~t~~~dg------~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~ 169 (479)
++..++.|+.++ .+..||..++++.....+.........+.+ ++..++.|+.+ ..+..||..+. .+
T Consensus 294 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~-~W 370 (534)
T PHA03098 294 NNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTVF--NNRIYVIGGIYNSISLNTVESWKPGES-KW 370 (534)
T ss_pred CCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEEE--CCEEEEEeCCCCCEecceEEEEcCCCC-ce
Confidence 455666666542 578899988876544433322222222222 56777777765 34777887764 23
Q ss_pred eeeeeeeccccceeEEEEecCCCEEEEEEcC------CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 170 ECAAVINAHIQDVKKVRFHPFDNILASASYD------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 170 ~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
.....+....... +++. -++++.+.|+.+ ..+..||..+.. |.....+.........+. .++..++.|
T Consensus 371 ~~~~~lp~~r~~~-~~~~-~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~~r~~~~~~~--~~~~iyv~G 444 (534)
T PHA03098 371 REEPPLIFPRYNP-CVVN-VNNLIYVIGGISKNDELLKTVECFSLNTNK--WSKGSPLPISHYGGCAIY--HDGKIYVIG 444 (534)
T ss_pred eeCCCcCcCCccc-eEEE-ECCEEEEECCcCCCCcccceEEEEeCCCCe--eeecCCCCccccCceEEE--ECCEEEEEC
Confidence 3322222111111 1222 256777777732 357888887543 333332221111111222 245555666
Q ss_pred eCC--------CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC-----CeEEEc
Q psy14815 244 SDD--------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD-----DAIRIF 310 (479)
Q Consensus 244 ~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d-----g~i~vw 310 (479)
+.+ ..+.+||.... .|..+..+... ......+.+ ++++++.|+.+ +.+.+|
T Consensus 445 G~~~~~~~~~~~~v~~yd~~~~-------------~W~~~~~~~~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~y 508 (534)
T PHA03098 445 GISYIDNIKVYNIVESYNPVTN-------------KWTELSSLNFP-RINASLCIF--NNKIYVVGGDKYEYYINEIEVY 508 (534)
T ss_pred CccCCCCCcccceEEEecCCCC-------------ceeeCCCCCcc-cccceEEEE--CCEEEEEcCCcCCcccceeEEE
Confidence 542 23777776432 22222211111 111111222 56677777654 467788
Q ss_pred ccCCCC
Q psy14815 311 KENPEA 316 (479)
Q Consensus 311 ~~~~~~ 316 (479)
|..+..
T Consensus 509 d~~~~~ 514 (534)
T PHA03098 509 DDKTNT 514 (534)
T ss_pred eCCCCE
Confidence 877654
|
|
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.0066 Score=60.79 Aligned_cols=163 Identities=13% Similarity=0.189 Sum_probs=98.5
Q ss_pred ccccCCcEEEEEECC-CCCEEEEEECCCeEEEEECC--CCeEEE---eEEEeCCCCcEEEEEEcC---CCCEEEEEeCCC
Q psy14815 86 SDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKR--SGQFEC---NATLEGHENEVKSVTWSK---NGQFLATCSRDK 156 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~--~~~~~~---~~~~~~~~~~v~~l~~~~---~~~~l~~~~~dg 156 (479)
..+..+.+-.++|-. +...+. -.-|.+.|||+. .|+..+ +.........+.-+.|.| +..++..+..++
T Consensus 128 ~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~ 205 (1283)
T KOG1916|consen 128 AKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGG 205 (1283)
T ss_pred HhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCC
Confidence 456778888888854 222222 333678899875 343222 222233344556677766 566788888899
Q ss_pred cEEEEEeCCCCceeeeeeeeccccceeEEE-----------EecCCCEEEEEEcCCcEEEEecCC-cccceEeeeeecCC
Q psy14815 157 SVWVWEVGEEDEYECAAVINAHIQDVKKVR-----------FHPFDNILASASYDDTVKLFKEDK-AEADWINFATLKSH 224 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~-----------~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~ 224 (479)
.+++..+.... ...+.+|...+..++ .+|||..++.++.||.+++|.+.- +.....+....+.|
T Consensus 206 ~i~lL~~~ra~----~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewkph 281 (1283)
T KOG1916|consen 206 EIRLLNINRAL----RSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWKPH 281 (1283)
T ss_pred ceeEeeechHH----HHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeeccccHhhhhccCCC
Confidence 99998876542 133445666555443 589999999999999999997652 22233455566667
Q ss_pred C-ccEEEEEEccCC---------CEEEEeeC-CCeEEEEec
Q psy14815 225 T-STVWSLAFDRIG---------SRLATCSD-DATVKIWKE 254 (479)
Q Consensus 225 ~-~~v~~~~~~~~~---------~~l~s~~~-dg~i~iwd~ 254 (479)
. .+-.|.-+..+. .+++++++ +..+++|..
T Consensus 282 d~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~ 322 (1283)
T KOG1916|consen 282 DKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAE 322 (1283)
T ss_pred CCCCceeeeeccccccCCccceeEEEEecccCCcceeEeec
Confidence 6 333333333221 23445543 456889985
|
|
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=95.77 E-value=2.4 Score=42.34 Aligned_cols=186 Identities=6% Similarity=-0.020 Sum_probs=99.6
Q ss_pred CCeEEEeeCCCcEEEEecccccccccccCCC-------------------ccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 23 GTMISSCGEDKNIRLWVMVIREPYEKLHGLP-------------------VETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 23 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+..++.++.++.|.-.|..+|+.+-++.... .+..++....++.+...|.++....+....
T Consensus 69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~~~~v~v~t~dg~l~ALDa~TGk~~W~~~~ 148 (527)
T TIGR03075 69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALYDGKVFFGTLDARLVALDAKTGKVVWSKKN 148 (527)
T ss_pred CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceEECCEEEEEcCCCEEEEEECCCCCEEeeccc
Confidence 4567777778889888999888776543211 013355556677777777765444443322
Q ss_pred EeccccCCcEEEEEECC--CCCEEEEEEC------CCeEEEEECCCCeEEEeEEEeCCC---------------------
Q psy14815 84 ILSDGHQRTIRETAWSP--CGNFIASASF------DATTAVWDKRSGQFECNATLEGHE--------------------- 134 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~--~~~~l~t~~~------dg~i~iwd~~~~~~~~~~~~~~~~--------------------- 134 (479)
. .+... ..+.-+| .+..++.+.. +|.|.-+|.++|+..-........
T Consensus 149 ~---~~~~~-~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~ 224 (527)
T TIGR03075 149 G---DYKAG-YTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWP 224 (527)
T ss_pred c---ccccc-ccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCC
Confidence 1 11100 0111122 1234555432 689999999998733221111000
Q ss_pred --------CcEE-EEEEcCCCCEEEEEeCC-----C-----------cEEEEEeCCCCceeeeeeeecccc-------ce
Q psy14815 135 --------NEVK-SVTWSKNGQFLATCSRD-----K-----------SVWVWEVGEEDEYECAAVINAHIQ-------DV 182 (479)
Q Consensus 135 --------~~v~-~l~~~~~~~~l~~~~~d-----g-----------~i~vwd~~~~~~~~~~~~~~~~~~-------~v 182 (479)
..+. .+++.++..+++.+..+ + +|.-.|+++++..-.. +...|.. ..
T Consensus 225 ~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~-Q~~~~D~wD~d~~~~p 303 (527)
T TIGR03075 225 GDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHY-QTTPHDEWDYDGVNEM 303 (527)
T ss_pred CCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEee-eCCCCCCccccCCCCc
Confidence 0111 23555555666666522 2 5666777777432222 2222221 11
Q ss_pred eEEEEecCCC---EEEEEEcCCcEEEEecCCccc
Q psy14815 183 KKVRFHPFDN---ILASASYDDTVKLFKEDKAEA 213 (479)
Q Consensus 183 ~~l~~~~~~~---~l~~~~~dg~i~i~d~~~~~~ 213 (479)
.-+....+|+ .++.+..+|.+.+.|.++++.
T Consensus 304 ~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~ 337 (527)
T TIGR03075 304 ILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKL 337 (527)
T ss_pred EEEEeccCCcEEEEEEEeCCCceEEEEECCCCce
Confidence 1122223564 788999999999999998874
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=95.76 E-value=1.2 Score=38.69 Aligned_cols=140 Identities=12% Similarity=0.024 Sum_probs=80.2
Q ss_pred eEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCc
Q psy14815 57 SLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE 136 (479)
Q Consensus 57 ~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 136 (479)
.++.++..+.+.--|..+.+-.+... -...|.+-+.- -|++++.|+..|.+.+.+.++|. ....+..- +.
T Consensus 25 ~v~igSHs~~~~avd~~sG~~~We~i------lg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs--~~w~f~~~-~~ 94 (354)
T KOG4649|consen 25 LVVIGSHSGIVIAVDPQSGNLIWEAI------LGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGS--QIWNFVIL-ET 94 (354)
T ss_pred EEEEecCCceEEEecCCCCcEEeehh------hCceeeeeeEE-ECCEEEEEEccCcEEEEEecchh--heeeeeeh-hh
Confidence 34445555666666655433222211 12223222222 46789999999999999999995 22222211 11
Q ss_pred E-EEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecC
Q psy14815 137 V-KSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 209 (479)
Q Consensus 137 v-~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~ 209 (479)
| ......+++..+..|+.|++....|.++. .++...+.......+-+..|-...|..+...|.+.--...
T Consensus 95 vk~~a~~d~~~glIycgshd~~~yalD~~~~---~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vlavt~~ 165 (354)
T KOG4649|consen 95 VKVRAQCDFDGGLIYCGSHDGNFYALDPKTY---GCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVTKN 165 (354)
T ss_pred hccceEEcCCCceEEEecCCCcEEEeccccc---ceEEecccCCceeccceecCCCceEEEEeccceEEEEccC
Confidence 2 12344568899999999999999999876 4444444433333344555633344555555655444443
|
|
| >KOG2280|consensus | Back alignment and domain information |
|---|
Probab=95.55 E-value=1.6 Score=43.80 Aligned_cols=160 Identities=14% Similarity=0.096 Sum_probs=79.7
Q ss_pred cEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEe-EEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE-EeCCCCce
Q psy14815 92 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECN-ATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW-EVGEEDEY 169 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vw-d~~~~~~~ 169 (479)
.+-.+.|+.+. .|++...+|++.+|++.....+.. ..++.....|..+.+..+| +++-..+|.+.+- +......
T Consensus 85 ~lI~mgWs~~e-eLI~v~k~g~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~f~~G--Vavlt~~g~v~~i~~~~~~~~- 160 (829)
T KOG2280|consen 85 ELIGMGWSDDE-ELICVQKDGTVHVYGLLGEFIESNSVGFESQMSDIVECRFFHNG--VAVLTVSGQVILINGVEEPKL- 160 (829)
T ss_pred CeeeecccCCc-eEEEEeccceEEEeecchhhhcccccccccccCceeEEEEecCc--eEEEecCCcEEEEcCCCcchh-
Confidence 78889998665 677778899999999865432211 1123333456666665555 3333444554433 2222111
Q ss_pred eeeeeeeccccceeEEEEecCC---CEEEEEE-cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeC
Q psy14815 170 ECAAVINAHIQDVKKVRFHPFD---NILASAS-YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 245 (479)
Q Consensus 170 ~~~~~~~~~~~~v~~l~~~~~~---~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 245 (479)
...........+-+|-...+++ ..++-.. ..+ ..++-...... ....+....+.+..+..||+.++|+--..
T Consensus 161 ~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~-~~~~q~~~~~~---q~~~~~~~~~~~~ki~VS~n~~~laLyt~ 236 (829)
T KOG2280|consen 161 RKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVG-LHICQVEESRV---QLHALSWPNSSVVKISVSPNRRFLALYTE 236 (829)
T ss_pred hhCCCCCCccCCCcceeEecCCCcceeEEeechhhh-hcccceecccc---cccccCCCCceEEEEEEcCCcceEEEEec
Confidence 1111111111222232222222 1111111 000 11121111111 12222223456788999999999999999
Q ss_pred CCeEEEEeccCCCC
Q psy14815 246 DATVKIWKEYKPGN 259 (479)
Q Consensus 246 dg~i~iwd~~~~~~ 259 (479)
+|.|.+-+......
T Consensus 237 ~G~i~~vs~D~~~~ 250 (829)
T KOG2280|consen 237 TGKIWVVSIDLSQI 250 (829)
T ss_pred CCcEEEEecchhhh
Confidence 99998888754433
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.95 Score=45.57 Aligned_cols=146 Identities=9% Similarity=0.084 Sum_probs=74.5
Q ss_pred CCCEEEEEECC-----CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC------CcEEEEEeCCCCce
Q psy14815 101 CGNFIASASFD-----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD------KSVWVWEVGEEDEY 169 (479)
Q Consensus 101 ~~~~l~t~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~ 169 (479)
++...+.||.+ ..+..||..++++.....+....... +++. -+++..+.|+.+ ..+..||..+. .+
T Consensus 342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~~-~~~~-~~~~iYv~GG~~~~~~~~~~v~~yd~~t~-~W 418 (534)
T PHA03098 342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNP-CVVN-VNNLIYVIGGISKNDELLKTVECFSLNTN-KW 418 (534)
T ss_pred CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCccc-eEEE-ECCEEEEECCcCCCCcccceEEEEeCCCC-ee
Confidence 56677777764 36788999888776544443222221 2222 256666777632 35788898764 23
Q ss_pred eeeeeeeccccceeEEEEecCCCEEEEEEcCC--------cEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE
Q psy14815 170 ECAAVINAHIQDVKKVRFHPFDNILASASYDD--------TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 170 ~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg--------~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 241 (479)
.....+....... ++. ..++..++.|+.++ .+.+||..+.+ |..+..+.........+.+ +++.++
T Consensus 419 ~~~~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~r~~~~~~~~--~~~iyv 492 (534)
T PHA03098 419 SKGSPLPISHYGG-CAI-YHDGKIYVIGGISYIDNIKVYNIVESYNPVTNK--WTELSSLNFPRINASLCIF--NNKIYV 492 (534)
T ss_pred eecCCCCccccCc-eEE-EECCEEEEECCccCCCCCcccceEEEecCCCCc--eeeCCCCCcccccceEEEE--CCEEEE
Confidence 3322222111111 222 22566777776432 37888877543 3333322221111222222 466666
Q ss_pred EeeCC-----CeEEEEecc
Q psy14815 242 TCSDD-----ATVKIWKEY 255 (479)
Q Consensus 242 s~~~d-----g~i~iwd~~ 255 (479)
.|+.+ +.+.+||..
T Consensus 493 ~GG~~~~~~~~~v~~yd~~ 511 (534)
T PHA03098 493 VGGDKYEYYINEIEVYDDK 511 (534)
T ss_pred EcCCcCCcccceeEEEeCC
Confidence 66654 357777753
|
|
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=95.46 E-value=3.9 Score=42.57 Aligned_cols=232 Identities=9% Similarity=0.072 Sum_probs=134.0
Q ss_pred EEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECC--------------CeEEEEECCCCe
Q psy14815 58 LRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD--------------ATTAVWDKRSGQ 123 (479)
Q Consensus 58 ~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~d--------------g~i~iwd~~~~~ 123 (479)
.+.....+.+.+-.++......... . .-......+++.+....+++.+.. ..++++|-++-+
T Consensus 686 ~l~~~~~~~l~i~tid~iqkl~irt-v---pl~~~prrI~~q~~sl~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf~ 761 (1096)
T KOG1897|consen 686 SLASANGGALTIGTIDEIQKLHIRT-V---PLGESPRRICYQESSLTFGVLSNRIESSAEYYGEEYEVSFLRVLDQNTFE 761 (1096)
T ss_pred eEEEecCCceEEEEecchhhcceee-e---cCCCChhheEecccceEEEEEecccccchhhcCCcceEEEEEEecCCcee
Confidence 3344455666666665433322222 2 223455666676644444443321 246666666554
Q ss_pred EEEeEEEeCCC--CcEEEEEEcCC-CCEEEEEeC----------CCcEEEEEeCCCCceeeeeeeeccccceeEEEEecC
Q psy14815 124 FECNATLEGHE--NEVKSVTWSKN-GQFLATCSR----------DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 190 (479)
Q Consensus 124 ~~~~~~~~~~~--~~v~~l~~~~~-~~~l~~~~~----------dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 190 (479)
....+.+...+ ..+.++.|..| +.++++|.. .|.|.+|.....+..+.+....- ++.+.++.-- +
T Consensus 762 vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v-~Gav~aL~~f-n 839 (1096)
T KOG1897|consen 762 VLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVV-KGAVYALVEF-N 839 (1096)
T ss_pred EEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeee-ccceeehhhh-C
Confidence 33333333222 23455568877 677887763 47889998887544444433322 2334443322 3
Q ss_pred CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCC
Q psy14815 191 DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDS 270 (479)
Q Consensus 191 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 270 (479)
|+++|. -+..|++|+..+.+. ++.-..+..++..+...-.++.++.|.--+.+.+-..+..+..
T Consensus 840 gkllA~--In~~vrLye~t~~~e----Lr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~---------- 903 (1096)
T KOG1897|consen 840 GKLLAG--INQSVRLYEWTTERE----LRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGN---------- 903 (1096)
T ss_pred CeEEEe--cCcEEEEEEccccce----ehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccCCc----------
Confidence 665543 456899999986642 5555667888999999889999999998888777765433211
Q ss_pred ceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCC
Q psy14815 271 VWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 271 ~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
....-+.-+..+++++.+-.+..++ .+-.+|.+.+-..++.
T Consensus 904 ---f~evArD~~p~Wmtaveil~~d~yl-gae~~gNlf~v~~d~~ 944 (1096)
T KOG1897|consen 904 ---FEEVARDYNPNWMTAVEILDDDTYL-GAENSGNLFTVRKDSD 944 (1096)
T ss_pred ---eEEeehhhCccceeeEEEecCceEE-eecccccEEEEEecCC
Confidence 1122222236678888877655544 4556788877766543
|
|
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=95.44 E-value=1 Score=45.68 Aligned_cols=116 Identities=16% Similarity=0.114 Sum_probs=77.0
Q ss_pred cEEEEEECC--CCCEEEEEECCCeEEEEECCC-------C----e-------EEEeEEEeCCCCcEEEEEEc--CCCCEE
Q psy14815 92 TIRETAWSP--CGNFIASASFDATTAVWDKRS-------G----Q-------FECNATLEGHENEVKSVTWS--KNGQFL 149 (479)
Q Consensus 92 ~v~~v~~~~--~~~~l~t~~~dg~i~iwd~~~-------~----~-------~~~~~~~~~~~~~v~~l~~~--~~~~~l 149 (479)
.|+.|.... ....|+.|..||.|.+|..++ . + ..+...+. ....+++++++ ...++|
T Consensus 102 tIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlI 180 (717)
T PF08728_consen 102 TINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLI 180 (717)
T ss_pred eeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEE
Confidence 455555443 557899999999999997521 0 0 01122222 33578999998 778889
Q ss_pred EEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCC---C---EEEEEEcCCcEEEEec
Q psy14815 150 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD---N---ILASASYDDTVKLFKE 208 (479)
Q Consensus 150 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~---~---~l~~~~~dg~i~i~d~ 208 (479)
|+++....|.||-............-..+...|.+|+|-++. . .+++++-.|.+.+|++
T Consensus 181 AVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 181 AVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 999888888888765531111111112356678999997743 2 7888899999999887
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.56 Score=44.57 Aligned_cols=113 Identities=11% Similarity=0.117 Sum_probs=57.4
Q ss_pred ceeEEEEecCCCEEEEEE-----------cCC-cEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCe
Q psy14815 181 DVKKVRFHPFDNILASAS-----------YDD-TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 248 (479)
Q Consensus 181 ~v~~l~~~~~~~~l~~~~-----------~dg-~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~ 248 (479)
....|+|.++|+++++-. ..+ .|.+++-..+.........+.........+++.+++ |+.++....
T Consensus 15 ~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G--lyV~~~~~i 92 (367)
T TIGR02604 15 NPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG--VYVATPPDI 92 (367)
T ss_pred CCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC--EEEeCCCeE
Confidence 356789999998776643 223 677776543322111222232233445788998888 444444433
Q ss_pred EEEEeccCCCCCCCCCCCCCCCceEEEEEEecc---ccccEEEEEecCCCCeEEEEe
Q psy14815 249 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH---HGRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 249 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~l~~~~~~~~l~~~~ 302 (479)
.++.|......... .....+..+... .......+.|.|||.+.++-+
T Consensus 93 ~~~~d~~gdg~ad~-------~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G 142 (367)
T TIGR02604 93 LFLRDKDGDDKADG-------EREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG 142 (367)
T ss_pred EEEeCCCCCCCCCC-------ccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence 33334432211110 001112222221 123577899999998766554
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=95.40 E-value=3.3 Score=41.40 Aligned_cols=145 Identities=12% Similarity=0.094 Sum_probs=81.4
Q ss_pred CeEEEeeCCCcEEEEecccccccccccCC-----------C--ccceEEEeec------CCcEEEecCCCCCCceeeeEE
Q psy14815 24 TMISSCGEDKNIRLWVMVIREPYEKLHGL-----------P--VETSLRQLVE------DKNIRLWGKESFGNKFTAKAI 84 (479)
Q Consensus 24 ~~l~t~~~dg~v~iwd~~~~~~~~~~~~~-----------~--~~~~~~~~~~------~~~i~~w~~~~~~~~~~~~~~ 84 (479)
..++.++.|+.+.-.|..+|+.+-..... + .+..++.... ++.+..+|.++....+.....
T Consensus 121 ~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~ 200 (527)
T TIGR03075 121 GKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTV 200 (527)
T ss_pred CEEEEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccCc
Confidence 45667778899999999888876554321 1 1222333222 466777777654444332222
Q ss_pred eccc--------------------------cCCcEE-EEEECCCCCEEEEEECC-----C-----------eEEEEECCC
Q psy14815 85 LSDG--------------------------HQRTIR-ETAWSPCGNFIASASFD-----A-----------TTAVWDKRS 121 (479)
Q Consensus 85 ~~~~--------------------------~~~~v~-~v~~~~~~~~l~t~~~d-----g-----------~i~iwd~~~ 121 (479)
.... -...+. .+++.|...+++.+..+ + +|.-.|+++
T Consensus 201 p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~T 280 (527)
T TIGR03075 201 PGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDT 280 (527)
T ss_pred CCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEcccc
Confidence 1100 011122 34666666666665522 2 677778899
Q ss_pred CeEEEeEEEeCCCC-------cEEEEEEcCCCC---EEEEEeCCCcEEEEEeCCCCc
Q psy14815 122 GQFECNATLEGHEN-------EVKSVTWSKNGQ---FLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 122 ~~~~~~~~~~~~~~-------~v~~l~~~~~~~---~l~~~~~dg~i~vwd~~~~~~ 168 (479)
|+..-.+....|.. ...-+....+|+ .++.+..+|.+.+.|.++++.
T Consensus 281 G~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~ 337 (527)
T TIGR03075 281 GKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKL 337 (527)
T ss_pred CCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCce
Confidence 98543333333321 112223334665 778999999999999988754
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.24 E-value=1.6 Score=43.11 Aligned_cols=142 Identities=5% Similarity=0.004 Sum_probs=75.4
Q ss_pred CCCEEEEEECC--CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC---cEEEEEeCCCCceeeeeee
Q psy14815 101 CGNFIASASFD--ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK---SVWVWEVGEEDEYECAAVI 175 (479)
Q Consensus 101 ~~~~l~t~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~~ 175 (479)
++...+.|+.+ .++..||..++++.....+.........+.. +|+..+.|+.++ .+..||.++. .+.....+
T Consensus 318 ~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~~~--~g~IYviGG~~~~~~~ve~ydp~~~-~W~~~~~m 394 (480)
T PHA02790 318 NNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVASI--NNVIYVIGGHSETDTTTEYLLPNHD-QWQFGPST 394 (480)
T ss_pred CCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCcccEEEEE--CCEEEEecCcCCCCccEEEEeCCCC-EEEeCCCC
Confidence 56666777753 4688899888877655554422222222222 677777777653 4677887764 33333222
Q ss_pred eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCC-----CeEE
Q psy14815 176 NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD-----ATVK 250 (479)
Q Consensus 176 ~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~ 250 (479)
....... +++ .-++++.+.| |.+.+||.++. .|..+..+.........+.+ +++..+.||.+ ..+.
T Consensus 395 ~~~r~~~-~~~-~~~~~IYv~G---G~~e~ydp~~~--~W~~~~~m~~~r~~~~~~v~--~~~IYviGG~~~~~~~~~ve 465 (480)
T PHA02790 395 YYPHYKS-CAL-VFGRRLFLVG---RNAEFYCESSN--TWTLIDDPIYPRDNPELIIV--DNKLLLIGGFYRGSYIDTIE 465 (480)
T ss_pred CCccccc-eEE-EECCEEEEEC---CceEEecCCCC--cEeEcCCCCCCccccEEEEE--CCEEEEECCcCCCcccceEE
Confidence 2111111 222 2246666666 35778888653 45544444332233333333 46666777654 2455
Q ss_pred EEec
Q psy14815 251 IWKE 254 (479)
Q Consensus 251 iwd~ 254 (479)
.||.
T Consensus 466 ~Yd~ 469 (480)
T PHA02790 466 VYNN 469 (480)
T ss_pred EEEC
Confidence 6664
|
|
| >COG5276 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.20 E-value=2.1 Score=37.99 Aligned_cols=159 Identities=12% Similarity=0.103 Sum_probs=102.6
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCce
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 169 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 169 (479)
.+-+..+.++ +++...+..+.-++|.|+.+........+-...+.-.++.. .|++..++..|.-..+.|+.+....
T Consensus 86 ~~l~~Dv~vs--e~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~v--sGn~aYVadlddgfLivdvsdpssP 161 (370)
T COG5276 86 RDLFADVRVS--EEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYV--SGNYAYVADLDDGFLIVDVSDPSSP 161 (370)
T ss_pred hhhhheeEec--ccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEe--cCCEEEEeeccCcEEEEECCCCCCc
Confidence 3456667776 45777777778899999987642111121112234445544 5889999987777888999988766
Q ss_pred eeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeE
Q psy14815 170 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 249 (479)
Q Consensus 170 ~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i 249 (479)
............-..++.| |++-..+..|+-+.+-|+..+.. +..+... .....+.++..+++..+++.. +--+
T Consensus 162 ~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~s-Pvli~~~-n~g~g~~sv~vsdnr~y~vvy--~egv 235 (370)
T COG5276 162 QLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHS-PVLIGSY-NTGPGTYSVSVSDNRAYLVVY--DEGV 235 (370)
T ss_pred eeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCC-CeEEEEE-ecCCceEEEEecCCeeEEEEc--ccce
Confidence 6666655555555667776 77888888999999999987663 2222222 223367788877765555544 3346
Q ss_pred EEEeccCCC
Q psy14815 250 KIWKEYKPG 258 (479)
Q Consensus 250 ~iwd~~~~~ 258 (479)
.+-|...+.
T Consensus 236 livd~s~~s 244 (370)
T COG5276 236 LIVDVSGPS 244 (370)
T ss_pred EEEecCCCC
Confidence 666665443
|
|
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=95.11 E-value=3.2 Score=39.64 Aligned_cols=90 Identities=16% Similarity=0.192 Sum_probs=55.6
Q ss_pred EEEECCCCCEEEEEECCCeEEE---EECC-----CCeEEEeE--EEeCCC-CcEEEEEEcC-----------CCCEEEEE
Q psy14815 95 ETAWSPCGNFIASASFDATTAV---WDKR-----SGQFECNA--TLEGHE-NEVKSVTWSK-----------NGQFLATC 152 (479)
Q Consensus 95 ~v~~~~~~~~l~t~~~dg~i~i---wd~~-----~~~~~~~~--~~~~~~-~~v~~l~~~~-----------~~~~l~~~ 152 (479)
.++.+|+++.|+.+..+..+.+ |+.. .+++.... .+.... ..|+++.|-| |...+++|
T Consensus 6 ~isls~~~d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I~VG 85 (415)
T PF14655_consen 6 SISLSPDGDLLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCIAVG 85 (415)
T ss_pred eEEecCCCCEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEEEEE
Confidence 4678899999999987765554 5331 12221111 122111 4677777644 35689999
Q ss_pred eCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEe
Q psy14815 153 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH 188 (479)
Q Consensus 153 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~ 188 (479)
..+|.|++|..... .+..-.-|..+|..+.+.
T Consensus 86 ~ssG~vrfyte~G~----LL~~Q~~h~~pV~~ik~~ 117 (415)
T PF14655_consen 86 TSSGYVRFYTENGV----LLLSQLLHEEPVLKIKCR 117 (415)
T ss_pred ecccEEEEEeccch----HHHHHhcCccceEEEEec
Confidence 99999999997542 222333466777777664
|
|
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=95.00 E-value=1.6 Score=42.60 Aligned_cols=152 Identities=14% Similarity=0.231 Sum_probs=88.0
Q ss_pred CCcEEEEEECCCCCEE-EEEE--CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC----CCEEEEEeCCCcEEEEE
Q psy14815 90 QRTIRETAWSPCGNFI-ASAS--FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN----GQFLATCSRDKSVWVWE 162 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l-~t~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~----~~~l~~~~~dg~i~vwd 162 (479)
-.++..++|. ||+.+ .|.- .+|.+++=| ...+..| ..|..+.|.|- ...+++......|.+|.
T Consensus 19 iHPvhGlaWT-DGkqVvLT~L~l~~gE~kfGd-----s~viGqF----EhV~GlsW~P~~~~~~paLLAVQHkkhVtVWq 88 (671)
T PF15390_consen 19 IHPVHGLAWT-DGKQVVLTDLQLHNGEPKFGD-----SKVIGQF----EHVHGLSWAPPCTADTPALLAVQHKKHVTVWQ 88 (671)
T ss_pred hccccceEec-CCCEEEEEeeeeeCCccccCC-----ccEeecc----ceeeeeeecCcccCCCCceEEEeccceEEEEE
Confidence 3578889997 45444 4432 233333322 1123333 35889999984 22455555778999999
Q ss_pred eCCC--Cceeeeeeeecc-c--cc--eeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEcc
Q psy14815 163 VGEE--DEYECAAVINAH-I--QD--VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR 235 (479)
Q Consensus 163 ~~~~--~~~~~~~~~~~~-~--~~--v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 235 (479)
+... +..+.+....++ . .+ -..+.|+|....|++-.....-.+++.+.... .++.--...+-|.|.+|.+
T Consensus 89 L~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~s---rVkaDi~~~G~IhCACWT~ 165 (671)
T PF15390_consen 89 LCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSS---RVKADIKTSGLIHCACWTK 165 (671)
T ss_pred eccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCc---eEEEeccCCceEEEEEecC
Confidence 8622 111111111111 1 11 23578999888888776665556677765443 2222224567899999999
Q ss_pred CCCEEEEeeCC-CeEEEEec
Q psy14815 236 IGSRLATCSDD-ATVKIWKE 254 (479)
Q Consensus 236 ~~~~l~s~~~d-g~i~iwd~ 254 (479)
||+.|+.+-.. =.-++||-
T Consensus 166 DG~RLVVAvGSsLHSyiWd~ 185 (671)
T PF15390_consen 166 DGQRLVVAVGSSLHSYIWDS 185 (671)
T ss_pred cCCEEEEEeCCeEEEEEecC
Confidence 99988765433 34577873
|
|
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=94.94 E-value=5.6 Score=41.55 Aligned_cols=114 Identities=8% Similarity=0.089 Sum_probs=65.5
Q ss_pred CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCC--c------EEEEEEc----------------CCCCEEEEEeCCCc
Q psy14815 102 GNFIASASFDATTAVWDKRSGQFECNATLEGHEN--E------VKSVTWS----------------KNGQFLATCSRDKS 157 (479)
Q Consensus 102 ~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~------v~~l~~~----------------~~~~~l~~~~~dg~ 157 (479)
+..++.++.++.|.-.|..+|+. +..+..... . ...+.+. ..+..++.++.|+.
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~--lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~ 271 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKE--KWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDAR 271 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcE--EEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCe
Confidence 56788888889999999999873 333322111 0 1122221 13447888999999
Q ss_pred EEEEEeCCCCceeeeee-----ee----ccccceeEEEEec--CCCEEEEEEc----------CCcEEEEecCCcccceE
Q psy14815 158 VWVWEVGEEDEYECAAV-----IN----AHIQDVKKVRFHP--FDNILASASY----------DDTVKLFKEDKAEADWI 216 (479)
Q Consensus 158 i~vwd~~~~~~~~~~~~-----~~----~~~~~v~~l~~~~--~~~~l~~~~~----------dg~i~i~d~~~~~~~~~ 216 (479)
+.-.|.++++....... +. .....-..+.-.| .+..+++|+. +|.|+-+|.++++..|.
T Consensus 272 LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~ 351 (764)
T TIGR03074 272 LIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWA 351 (764)
T ss_pred EEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeE
Confidence 99999998853221110 00 0000000111122 2345666643 68899999999987665
Q ss_pred e
Q psy14815 217 N 217 (479)
Q Consensus 217 ~ 217 (479)
.
T Consensus 352 ~ 352 (764)
T TIGR03074 352 W 352 (764)
T ss_pred E
Confidence 4
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.047 Score=55.05 Aligned_cols=187 Identities=16% Similarity=0.165 Sum_probs=104.3
Q ss_pred CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEEeCCCC--ce--eeeeeeeccccceeEEE
Q psy14815 112 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEED--EY--ECAAVINAHIQDVKKVR 186 (479)
Q Consensus 112 g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vwd~~~~~--~~--~~~~~~~~~~~~v~~l~ 186 (479)
+.+++-+....-. .....++..+.|-.+.|-. +...+. -.-|.+.+||+.--+ .. -.+........++.-+.
T Consensus 111 ~~vrvaN~~~sm~-~~~l~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~ 187 (1283)
T KOG1916|consen 111 NGVRVANQEPSMR-HNELAKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVS 187 (1283)
T ss_pred hhhhhccCcchhH-HHHHHhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceee
Confidence 4566655443310 1122345566777777743 111222 233678889876421 10 11222333344455556
Q ss_pred Eec---CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEE-----------EccCCCEEEEeeCCCeEEEE
Q psy14815 187 FHP---FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLA-----------FDRIGSRLATCSDDATVKIW 252 (479)
Q Consensus 187 ~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~-----------~~~~~~~l~s~~~dg~i~iw 252 (479)
|.| +.-++..+-.++.|++........ .-+.+|...+..++ .+|||+.++.++.||.+++|
T Consensus 188 wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-----~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~ 262 (1283)
T KOG1916|consen 188 WCPIAVNKVYICYGLKGGEIRLLNINRALR-----SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFY 262 (1283)
T ss_pred ecccccccceeeeccCCCceeEeeechHHH-----HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCcccee
Confidence 655 566777788889998887765432 23344666655544 58999999999999999999
Q ss_pred eccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCC---------CeEEEEeC-CCeEEEcccCCCC
Q psy14815 253 KEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT---------DLIATACG-DDAIRIFKENPEA 316 (479)
Q Consensus 253 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~---------~~l~~~~~-dg~i~vw~~~~~~ 316 (479)
.+.-.+. ....|+...+.|.+.+-.|.-|+.+. .++++++. +..+++|....-+
T Consensus 263 Qiyi~g~----------~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~ 326 (1283)
T KOG1916|consen 263 QIYITGK----------IVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQ 326 (1283)
T ss_pred eeeeecc----------ccHhhhhccCCCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEeeccchh
Confidence 8754433 22245555555543343333343221 13444443 4668899776654
|
|
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=94.67 E-value=2.5 Score=36.20 Aligned_cols=216 Identities=10% Similarity=0.083 Sum_probs=106.9
Q ss_pred CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCC--CEEEEEeC-CCcEEEEEeCCCCceeeeeeee--
Q psy14815 102 GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG--QFLATCSR-DKSVWVWEVGEEDEYECAAVIN-- 176 (479)
Q Consensus 102 ~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~--~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~-- 176 (479)
+.++.+--..|.|.-||+.+.+. ....+++. ++.++.+--.+ +.++++.. .-.|.-||...... ....++.
T Consensus 27 ~sLl~VDi~ag~v~r~D~~qn~v-~ra~ie~p--~~ag~ilpv~~~~q~~~v~~G~kf~i~nwd~~~~~a-~v~~t~~ev 102 (310)
T KOG4499|consen 27 QSLLYVDIEAGEVHRYDIEQNKV-YRAKIEGP--PSAGFILPVEGGPQEFAVGCGSKFVIVNWDGVSESA-KVYRTLFEV 102 (310)
T ss_pred ceEEEEEeccCceehhhhhhhhe-EEEEEecC--cceeEEEEecCCCceEEEeecceEEEEEccccccee-eeeeecccc
Confidence 34555555567788899988752 33344432 23344443222 23333332 22344466432210 1111110
Q ss_pred ---ccccceeEEEEecCCCEEEEEEcC---------CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE-Ee
Q psy14815 177 ---AHIQDVKKVRFHPFDNILASASYD---------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA-TC 243 (479)
Q Consensus 177 ---~~~~~v~~l~~~~~~~~l~~~~~d---------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~ 243 (479)
......+.-..+|+|++++-.-.| |.++.|-.... +..+...-.--+.++|+.+.+.+. +-
T Consensus 103 ~~d~kknR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~h~------v~~i~~~v~IsNgl~Wd~d~K~fY~iD 176 (310)
T KOG4499|consen 103 QPDRKKNRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAGHQ------VELIWNCVGISNGLAWDSDAKKFYYID 176 (310)
T ss_pred CchHHhcccccCccCCCCceeeeeeccccccccccccEEEEeccCCC------ceeeehhccCCccccccccCcEEEEEc
Confidence 113345566778999884322222 23333332210 111111111225678887776664 45
Q ss_pred eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc---ccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCC
Q psy14815 244 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH---HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSD 320 (479)
Q Consensus 244 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 320 (479)
+.+-.|.-||...+.-.. ...+.+..++.. .....-.++...+|.+.++.-..++|...|..+++
T Consensus 177 sln~~V~a~dyd~~tG~~--------snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK---- 244 (310)
T KOG4499|consen 177 SLNYEVDAYDYDCPTGDL--------SNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGK---- 244 (310)
T ss_pred cCceEEeeeecCCCcccc--------cCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCc----
Confidence 566678778853322111 111222222211 01112234456678888888788999999999998
Q ss_pred ceeeEEEeccccccccceeEEEecC
Q psy14815 321 MVSFDLVHTEHRAHNQDVNCVAWNP 345 (479)
Q Consensus 321 ~~~~~~~~~~~~~h~~~v~~~~~sp 345 (479)
++..+ +-....|++++|--
T Consensus 245 -----~L~ei-klPt~qitsccFgG 263 (310)
T KOG4499|consen 245 -----ILLEI-KLPTPQITSCCFGG 263 (310)
T ss_pred -----EEEEE-EcCCCceEEEEecC
Confidence 44433 34577899999974
|
|
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=94.65 E-value=2.2 Score=43.36 Aligned_cols=150 Identities=12% Similarity=0.128 Sum_probs=91.3
Q ss_pred CCEEEEEECCCeEEEEECCCCeEEE----eEEEe----------------CCCCcEEEEEEcC--CCCEEEEEeCCCcEE
Q psy14815 102 GNFIASASFDATTAVWDKRSGQFEC----NATLE----------------GHENEVKSVTWSK--NGQFLATCSRDKSVW 159 (479)
Q Consensus 102 ~~~l~t~~~dg~i~iwd~~~~~~~~----~~~~~----------------~~~~~v~~l~~~~--~~~~l~~~~~dg~i~ 159 (479)
..+++++. .+.|.||++..-.... ...+. .....|+.|.... +...|+.+..||.|.
T Consensus 49 ~n~LFiA~-~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p~PHtIN~i~v~~lg~~EVLl~c~DdG~V~ 127 (717)
T PF08728_consen 49 RNLLFIAY-QSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWPFPHTINFIKVGDLGGEEVLLLCTDDGDVL 127 (717)
T ss_pred CCEEEEEE-CCEEEEEecCCcccccccccccccccCccccccccccccCCCCCceeeEEEecccCCeeEEEEEecCCeEE
Confidence 56777765 5899999976432111 00110 0112244443332 456899999999999
Q ss_pred EEEeCCC-----------C------ceeeeeeeeccccceeEEEEe--cCCCEEEEEEcCCcEEEEecCCcccceEeeee
Q psy14815 160 VWEVGEE-----------D------EYECAAVINAHIQDVKKVRFH--PFDNILASASYDDTVKLFKEDKAEADWINFAT 220 (479)
Q Consensus 160 vwd~~~~-----------~------~~~~~~~~~~~~~~v~~l~~~--~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 220 (479)
+|.++.- . ..++...+. -...+++++++ ...++||+++....|.||-............
T Consensus 128 ~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~- 205 (717)
T PF08728_consen 128 AYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVP- 205 (717)
T ss_pred EEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEEecCCceEEEEEEecccccccccc-
Confidence 9976320 0 001111122 23468899998 7788999998888888887654322111111
Q ss_pred ecCCCccEEEEEEccCC---C---EEEEeeCCCeEEEEec
Q psy14815 221 LKSHTSTVWSLAFDRIG---S---RLATCSDDATVKIWKE 254 (479)
Q Consensus 221 ~~~~~~~v~~~~~~~~~---~---~l~s~~~dg~i~iwd~ 254 (479)
-..+...|-+|+|-++. . .+++++-.|.+.+|++
T Consensus 206 s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 206 SHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred ccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 12366778899996643 2 7788889999999887
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >PF14727 PHTB1_N: PTHB1 N-terminus | Back alignment and domain information |
|---|
Probab=94.64 E-value=4.4 Score=38.86 Aligned_cols=139 Identities=12% Similarity=0.104 Sum_probs=82.7
Q ss_pred CCCeEEEeeCCCcEEEEeccccccc--------------ccccC----CCccceEEEeecCCcEEEecCCCCCCc-----
Q psy14815 22 QGTMISSCGEDKNIRLWVMVIREPY--------------EKLHG----LPVETSLRQLVEDKNIRLWGKESFGNK----- 78 (479)
Q Consensus 22 ~~~~l~t~~~dg~v~iwd~~~~~~~--------------~~~~~----~~~~~~~~~~~~~~~i~~w~~~~~~~~----- 78 (479)
+...|++||..|.++||+...++.. -.+.. .......++.-.-..+.+|.+......
T Consensus 36 ~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g~ 115 (418)
T PF14727_consen 36 GSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHGN 115 (418)
T ss_pred CccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccCc
Confidence 3458999999999999987443311 00100 111334555566677888877432222
Q ss_pred -eeeeEEeccccCCcEEEEEECC----C-CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy14815 79 -FTAKAILSDGHQRTIRETAWSP----C-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 152 (479)
Q Consensus 79 -~~~~~~~~~~~~~~v~~v~~~~----~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~ 152 (479)
..........-......+++-| . ..++.+=+.||.+.+++-+.-. ....+.. ---...+.|.+.-+.|+++
T Consensus 116 ~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~--f~~~lp~-~llPgPl~Y~~~tDsfvt~ 192 (418)
T PF14727_consen 116 QYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFA--FSRFLPD-FLLPGPLCYCPRTDSFVTA 192 (418)
T ss_pred EEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEE--EEEEcCC-CCCCcCeEEeecCCEEEEe
Confidence 2222222222234444455444 2 3678888999999999976543 2233332 2223456788888889999
Q ss_pred eCCCcEEEEEe
Q psy14815 153 SRDKSVWVWEV 163 (479)
Q Consensus 153 ~~dg~i~vwd~ 163 (479)
+.+..+..|..
T Consensus 193 sss~~l~~Yky 203 (418)
T PF14727_consen 193 SSSWTLECYKY 203 (418)
T ss_pred cCceeEEEecH
Confidence 98888888865
|
|
| >PF14761 HPS3_N: Hermansky-Pudlak syndrome 3 | Back alignment and domain information |
|---|
Probab=94.54 E-value=2.6 Score=35.82 Aligned_cols=147 Identities=15% Similarity=0.134 Sum_probs=80.6
Q ss_pred CEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC------cEEEE-EeCCC---Cceeee
Q psy14815 103 NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK------SVWVW-EVGEE---DEYECA 172 (479)
Q Consensus 103 ~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg------~i~vw-d~~~~---~~~~~~ 172 (479)
+.|+.+...+.|.+|++.+........+..- +.|..+.++..|++++|--.+. .+|+| |.+.. +.....
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv-~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~v 107 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFSTV-GRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRV 107 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcch-hheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEE
Confidence 4444445568899999986555566777654 7899999999999999975432 45564 22111 100000
Q ss_pred -------------------eeee-ccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceE--eeeee----cC-CC
Q psy14815 173 -------------------AVIN-AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI--NFATL----KS-HT 225 (479)
Q Consensus 173 -------------------~~~~-~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~----~~-~~ 225 (479)
.... .-..++.+++..|...-|+.|+ ++.+.+|.+........ .+..+ -. |.
T Consensus 108 RiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~-~~~l~lf~l~~~~~~~~~~~~lDFe~~l~~~~~ 186 (215)
T PF14761_consen 108 RIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGC-GNKLVLFTLKYQTIQSEKFSFLDFERSLIDHID 186 (215)
T ss_pred EEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEc-CCEEEEEEEEEEEEecccccEEechhhhhheec
Confidence 0000 1133567888888433355554 45788888764332100 01111 11 11
Q ss_pred -ccEEEEEEccCCCEEEEeeCCCeEEEEec
Q psy14815 226 -STVWSLAFDRIGSRLATCSDDATVKIWKE 254 (479)
Q Consensus 226 -~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 254 (479)
-....+++. +.++|..+ +-.+++..+
T Consensus 187 ~~~p~~v~ic--~~yiA~~s-~~ev~Vlkl 213 (215)
T PF14761_consen 187 NFKPTQVAIC--EGYIAVMS-DLEVLVLKL 213 (215)
T ss_pred CceEEEEEEE--eeEEEEec-CCEEEEEEE
Confidence 124555555 55776665 445666654
|
|
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.3 Score=50.96 Aligned_cols=106 Identities=16% Similarity=0.072 Sum_probs=68.9
Q ss_pred CCcEEEEEECCCC-CEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc
Q psy14815 90 QRTIRETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 90 ~~~v~~v~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 168 (479)
.....++.|+|.- ...+.+..|+.|++..+..... ....+. ....+++++|+|.|+.++.|-..|++.-|...-...
T Consensus 155 ~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~-~v~s~p-~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik 232 (1405)
T KOG3630|consen 155 PVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQ-NVTSFP-VTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIK 232 (1405)
T ss_pred ccccccccccCCccchhhhhccccchhhhhhhhhhh-hhcccC-cccceeeEEeccccceeeEecCCCeEEEeeccccee
Confidence 3456678898853 3456677789999887654331 122222 346789999999999999999999999887654311
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEE
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASA 197 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~ 197 (479)
...-..-......|.+++|-....++++-
T Consensus 233 ~~ip~Pp~~e~yrvl~v~Wl~t~eflvvy 261 (1405)
T KOG3630|consen 233 SEIPEPPVEENYRVLSVTWLSTQEFLVVY 261 (1405)
T ss_pred ecccCCCcCCCcceeEEEEecceeEEEEe
Confidence 11101011114678999998766666654
|
|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=94.27 E-value=2.9 Score=43.26 Aligned_cols=89 Identities=13% Similarity=0.255 Sum_probs=56.3
Q ss_pred CccEEEEEEccCCCEEEEeeCCCeEEEEeccC-CCCCCCCCCCCCCCceEEEEE------EeccccccEEEEEecCC---
Q psy14815 225 TSTVWSLAFDRIGSRLATCSDDATVKIWKEYK-PGNSAGIPTPDNDSVWKCVCT------LSGHHGRTIYDISWCHL--- 294 (479)
Q Consensus 225 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~~l~~~~~--- 294 (479)
.-.|..+.++|+|.+++..|..| |.|-.+.. .+....+.... ..-.|... +..+....|..+.|+|.
T Consensus 84 ~f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~--~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~ 160 (717)
T PF10168_consen 84 LFEVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGK--KEINCRTVPVDERFFTSNSSLEIKQVRWHPWSES 160 (717)
T ss_pred ceeEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCC--cceeEEEEEechhhccCCCCceEEEEEEcCCCCC
Confidence 34689999999999999888766 55555432 11111111110 11111111 12223568999999996
Q ss_pred CCeEEEEeCCCeEEEcccCCCC
Q psy14815 295 TDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 295 ~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+..|++=..|+++|+||+....
T Consensus 161 ~~~l~vLtsdn~lR~y~~~~~~ 182 (717)
T PF10168_consen 161 DSHLVVLTSDNTLRLYDISDPQ 182 (717)
T ss_pred CCeEEEEecCCEEEEEecCCCC
Confidence 4788888899999999997554
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=94.14 E-value=0.86 Score=42.83 Aligned_cols=106 Identities=11% Similarity=0.174 Sum_probs=73.1
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeE--EEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCC
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF--ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 166 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~ 166 (479)
..++|.++.||+|.+.+|+--.+++|.+.+....+. ......+..+..|....|+.+ .-++.-+..| +-+|-+...
T Consensus 65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pe 142 (657)
T KOG2377|consen 65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPE 142 (657)
T ss_pred CCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchh
Confidence 356999999999999999999999999999844331 122233344456889999865 4455554433 666766544
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEE
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASAS 198 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~ 198 (479)
. ..++..+.|...|+-..|.++.+.++-++
T Consensus 143 k--rslRlVks~~~nvnWy~yc~et~v~LL~t 172 (657)
T KOG2377|consen 143 K--RSLRLVKSHNLNVNWYMYCPETAVILLST 172 (657)
T ss_pred h--hhhhhhhhcccCccEEEEccccceEeeec
Confidence 3 34555667788889999999877554443
|
|
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=93.64 E-value=0.36 Score=29.00 Aligned_cols=31 Identities=23% Similarity=0.334 Sum_probs=26.2
Q ss_pred cceeEEEEecCC---CEEEEEEcCCcEEEEecCC
Q psy14815 180 QDVKKVRFHPFD---NILASASYDDTVKLFKEDK 210 (479)
Q Consensus 180 ~~v~~l~~~~~~---~~l~~~~~dg~i~i~d~~~ 210 (479)
+.+++++|+|+. .+|+.+-..|.|.++|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 358999999844 5888888899999999995
|
It contains a characteristic DLL sequence motif. |
| >KOG2280|consensus | Back alignment and domain information |
|---|
Probab=93.62 E-value=7.5 Score=39.34 Aligned_cols=203 Identities=12% Similarity=0.094 Sum_probs=96.5
Q ss_pred CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCC
Q psy14815 112 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD 191 (479)
Q Consensus 112 g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 191 (479)
-.|+|++.... .+..+--....+..+.|+.+. .|++...+|.+++|++..................|..+.+..+|
T Consensus 64 ~~I~If~~sG~---lL~~~~w~~~~lI~mgWs~~e-eLI~v~k~g~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~f~~G 139 (829)
T KOG2280|consen 64 PYIRIFNISGQ---LLGRILWKHGELIGMGWSDDE-ELICVQKDGTVHVYGLLGEFIESNSVGFESQMSDIVECRFFHNG 139 (829)
T ss_pred eeEEEEecccc---chHHHHhcCCCeeeecccCCc-eEEEEeccceEEEeecchhhhcccccccccccCceeEEEEecCc
Confidence 46888887543 222222122378899999765 56677799999999997643211101112223345555555455
Q ss_pred CEEEEEEcCCcEEEE-ecCCcccceEeeeeecCCCccEEEEEEccCCC---EEEEee-CCCeEEEEeccCCCCCCCCCCC
Q psy14815 192 NILASASYDDTVKLF-KEDKAEADWINFATLKSHTSTVWSLAFDRIGS---RLATCS-DDATVKIWKEYKPGNSAGIPTP 266 (479)
Q Consensus 192 ~~l~~~~~dg~i~i~-d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~s~~-~dg~i~iwd~~~~~~~~~~~~~ 266 (479)
+++-..+|.+.+- +...... ...........+-.|....+++. .++-.. ..+ ..++......
T Consensus 140 --Vavlt~~g~v~~i~~~~~~~~--~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~-~~~~q~~~~~-------- 206 (829)
T KOG2280|consen 140 --VAVLTVSGQVILINGVEEPKL--RKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVG-LHICQVEESR-------- 206 (829)
T ss_pred --eEEEecCCcEEEEcCCCcchh--hhCCCCCCccCCCcceeEecCCCcceeEEeechhhh-hcccceeccc--------
Confidence 3333444554433 3332111 00111111111112222222211 111110 000 0111111000
Q ss_pred CCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCC
Q psy14815 267 DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV 346 (479)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 346 (479)
.....+... ...+..+..||+.++|+--..+|.|.+-+.+..+ ++.....+...+...++|.-+
T Consensus 207 ------~q~~~~~~~-~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~---------~lce~~~~~~~~p~qm~Wcgn 270 (829)
T KOG2280|consen 207 ------VQLHALSWP-NSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQ---------ILCEFNCTDHDPPKQMAWCGN 270 (829)
T ss_pred ------ccccccCCC-CceEEEEEEcCCcceEEEEecCCcEEEEecchhh---------hhhccCCCCCCchHhceeecC
Confidence 001111111 3568889999999999999999999998887765 233322222333346666655
Q ss_pred C
Q psy14815 347 V 347 (479)
Q Consensus 347 ~ 347 (479)
.
T Consensus 271 d 271 (829)
T KOG2280|consen 271 D 271 (829)
T ss_pred C
Confidence 5
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=93.53 E-value=11 Score=39.28 Aligned_cols=154 Identities=7% Similarity=-0.011 Sum_probs=74.3
Q ss_pred EEEEECCCCCEEEEEECC------CeEEEEECCCCeEEEeEEEeCCCCcEE-EEEEcCCCCEEEEEeC---CCcEEEEEe
Q psy14815 94 RETAWSPCGNFIASASFD------ATTAVWDKRSGQFECNATLEGHENEVK-SVTWSKNGQFLATCSR---DKSVWVWEV 163 (479)
Q Consensus 94 ~~v~~~~~~~~l~t~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~v~-~l~~~~~~~~l~~~~~---dg~i~vwd~ 163 (479)
..++|.+|++.|+....+ ..|..+++.++.......+........ ....+.++++++..+. ++.+.+++.
T Consensus 175 ~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~ 254 (686)
T PRK10115 175 PSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDA 254 (686)
T ss_pred eEEEEeeCCCEEEEEEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEEC
Confidence 458999988877665442 368888888873222233333233333 3333447777665544 356888885
Q ss_pred CCCCceeeeeeeeccccce-eEEEEecCCCEEEEEEcC---CcEEEEecCCcccceEeeeeecCC--CccEEEEEEccCC
Q psy14815 164 GEEDEYECAAVINAHIQDV-KKVRFHPFDNILASASYD---DTVKLFKEDKAEADWINFATLKSH--TSTVWSLAFDRIG 237 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v-~~l~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~ 237 (479)
..... ... .+..+...+ ..+. +..+.+++....+ ..|...++... ..+. .+..+ ...+..+.+. .+
T Consensus 255 ~~~~~-~~~-~~~~~~~~~~~~~~-~~~~~ly~~tn~~~~~~~l~~~~~~~~-~~~~---~l~~~~~~~~i~~~~~~-~~ 326 (686)
T PRK10115 255 ELADA-EPF-VFLPRRKDHEYSLD-HYQHRFYLRSNRHGKNFGLYRTRVRDE-QQWE---ELIPPRENIMLEGFTLF-TD 326 (686)
T ss_pred cCCCC-Cce-EEEECCCCCEEEEE-eCCCEEEEEEcCCCCCceEEEecCCCc-ccCe---EEECCCCCCEEEEEEEE-CC
Confidence 33211 111 111112221 2221 2223333332221 23444444421 1222 23333 2367778877 33
Q ss_pred CEEEEeeCCCeEEEEecc
Q psy14815 238 SRLATCSDDATVKIWKEY 255 (479)
Q Consensus 238 ~~l~s~~~dg~i~iwd~~ 255 (479)
..+++...+|.-+++-+.
T Consensus 327 ~l~~~~~~~g~~~l~~~~ 344 (686)
T PRK10115 327 WLVVEERQRGLTSLRQIN 344 (686)
T ss_pred EEEEEEEeCCEEEEEEEc
Confidence 455666677776666553
|
|
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=93.47 E-value=0.3 Score=29.31 Aligned_cols=31 Identities=10% Similarity=0.201 Sum_probs=25.8
Q ss_pred cceEEEEECCCC---CeEEEeeCCCcEEEEeccc
Q psy14815 12 GRVWNVSWNPQG---TMISSCGEDKNIRLWVMVI 42 (479)
Q Consensus 12 ~~V~~l~~s~~~---~~l~t~~~dg~v~iwd~~~ 42 (479)
++|.++.|||+. .+|+.+-..|.|.|+|+.+
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 478999999844 5888888889999999874
|
It contains a characteristic DLL sequence motif. |
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=93.22 E-value=12 Score=38.88 Aligned_cols=93 Identities=16% Similarity=0.274 Sum_probs=55.3
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccc-cccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIR-EPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
-.|..|.++|+|++|+..|..| |.|-.+... .....+...+....+ +.+.+. .......+.
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~C---------rt~~v~--------~~~~~~~~~ 146 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINC---------RTVPVD--------ERFFTSNSS 146 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeE---------EEEEec--------hhhccCCCC
Confidence 4688899999999999998765 555544321 101111111000000 001000 011123456
Q ss_pred CcEEEEEECCC---CCEEEEEECCCeEEEEECCCC
Q psy14815 91 RTIRETAWSPC---GNFIASASFDATTAVWDKRSG 122 (479)
Q Consensus 91 ~~v~~v~~~~~---~~~l~t~~~dg~i~iwd~~~~ 122 (479)
..|..+.|+|. +..|+.=..|+++++||+...
T Consensus 147 ~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 147 LEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred ceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCC
Confidence 78999999995 578888899999999999754
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=93.12 E-value=2.1 Score=40.93 Aligned_cols=141 Identities=13% Similarity=0.133 Sum_probs=82.6
Q ss_pred CCCCeEEE-eeCCCcEEEEecccccccccccCCCc---------------cceEEEeecCCcEEEecCCCCCCceeeeEE
Q psy14815 21 PQGTMISS-CGEDKNIRLWVMVIREPYEKLHGLPV---------------ETSLRQLVEDKNIRLWGKESFGNKFTAKAI 84 (479)
Q Consensus 21 ~~~~~l~t-~~~dg~v~iwd~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~ 84 (479)
.|..+|++ |+....+.--|++.|+.+.....+.+ ...-+.+.++..+.-.|.+-.+++......
T Consensus 477 ~dssli~~dg~~~~kLykmDIErGkvveeW~~~ddvvVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~es 556 (776)
T COG5167 477 NDSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDVVVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVES 556 (776)
T ss_pred CCcceEEecCCCcccceeeecccceeeeEeecCCcceeecCCchhHHhcCccceEEeecccceEEecccccCCceeeeee
Confidence 34555544 44444555556666665554433211 222334445566666666654544333322
Q ss_pred eccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeC
Q psy14815 85 LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 164 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~ 164 (479)
..........+..-. ...++|.++..|.|++||--..+ ....+++....|..+..+.+|+++++.+. ..+.+-|++
T Consensus 557 KdY~tKn~Fss~~tT-esGyIa~as~kGDirLyDRig~r--AKtalP~lG~aIk~idvta~Gk~ilaTCk-~yllL~d~~ 632 (776)
T COG5167 557 KDYKTKNKFSSGMTT-ESGYIAAASRKGDIRLYDRIGKR--AKTALPGLGDAIKHIDVTANGKHILATCK-NYLLLTDVP 632 (776)
T ss_pred hhccccccccccccc-cCceEEEecCCCceeeehhhcch--hhhcCcccccceeeeEeecCCcEEEEeec-ceEEEEecc
Confidence 212222333333333 34599999999999999954432 44566777889999999999998877765 466677765
Q ss_pred C
Q psy14815 165 E 165 (479)
Q Consensus 165 ~ 165 (479)
-
T Consensus 633 i 633 (776)
T COG5167 633 I 633 (776)
T ss_pred c
Confidence 3
|
|
| >PRK14131 N-acetylneuraminic acid mutarotase; Provisional | Back alignment and domain information |
|---|
Probab=93.10 E-value=8.4 Score=36.77 Aligned_cols=55 Identities=11% Similarity=0.047 Sum_probs=28.1
Q ss_pred CCCEEEEEECC-----------CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy14815 101 CGNFIASASFD-----------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 155 (479)
Q Consensus 101 ~~~~l~t~~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d 155 (479)
++.+.+.|+.+ ..+..||..+.++..+.........-.+....-+++..+.|+.+
T Consensus 84 ~~~IYV~GG~~~~~~~~~~~~~~~v~~YD~~~n~W~~~~~~~p~~~~~~~~~~~~~~~IYv~GG~~ 149 (376)
T PRK14131 84 DGKLYVFGGIGKTNSEGSPQVFDDVYKYDPKTNSWQKLDTRSPVGLAGHVAVSLHNGKAYITGGVN 149 (376)
T ss_pred CCEEEEEcCCCCCCCCCceeEcccEEEEeCCCCEEEeCCCCCCCcccceEEEEeeCCEEEEECCCC
Confidence 45556666543 24778898888766543211111111122221367777777754
|
|
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=92.93 E-value=8.1 Score=36.14 Aligned_cols=157 Identities=12% Similarity=0.159 Sum_probs=85.4
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCccc
Q psy14815 134 ENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA 213 (479)
Q Consensus 134 ~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 213 (479)
...+.++.+.+++.+++++ ..|.+..-.-..++.+... ...-...++++.+.++++.++++ ..|.+++=..+.+.
T Consensus 172 ~g~~~~i~~~~~g~~v~~g-~~G~i~~s~~~gg~tW~~~--~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~- 246 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAVS-SRGNFYSTWEPGQTAWTPH--QRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLE- 246 (334)
T ss_pred cceEEEEEECCCCeEEEEe-CCceEEEEcCCCCCeEEEe--eCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCC-
Confidence 4578899999988766555 4565543211222233332 22334578899999988876665 55766532233332
Q ss_pred ceEeeeee-cCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec
Q psy14815 214 DWINFATL-KSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 292 (479)
Q Consensus 214 ~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 292 (479)
.|.....- ......+..+.+.+++..++ ++.+|.+.. ....+ .+|..+.....- ....+.+.|.
T Consensus 247 sW~~~~~~~~~~~~~l~~v~~~~~~~~~~-~G~~G~v~~-S~d~G------------~tW~~~~~~~~~-~~~~~~~~~~ 311 (334)
T PRK13684 247 SWSKPIIPEITNGYGYLDLAYRTPGEIWA-GGGNGTLLV-SKDGG------------KTWEKDPVGEEV-PSNFYKIVFL 311 (334)
T ss_pred ccccccCCccccccceeeEEEcCCCCEEE-EcCCCeEEE-eCCCC------------CCCeECCcCCCC-CcceEEEEEe
Confidence 33322111 11224578889998776554 556775543 32222 233332211111 2357788887
Q ss_pred CCCCeEEEEeCCCeEEEcc
Q psy14815 293 HLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 293 ~~~~~l~~~~~dg~i~vw~ 311 (479)
.+++.+++| ..|.|--|+
T Consensus 312 ~~~~~~~~G-~~G~il~~~ 329 (334)
T PRK13684 312 DPEKGFVLG-QRGVLLRYV 329 (334)
T ss_pred CCCceEEEC-CCceEEEec
Confidence 777766654 567876664
|
|
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=92.73 E-value=6.7 Score=34.73 Aligned_cols=187 Identities=13% Similarity=0.098 Sum_probs=98.8
Q ss_pred eEEEEECCCCCeEEEeeCCC--cEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC
Q psy14815 14 VWNVSWNPQGTMISSCGEDK--NIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR 91 (479)
Q Consensus 14 V~~l~~s~~~~~l~t~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 91 (479)
...+.|..+|.++-+.+.-| .|+.+|+.+++......-.+ .-...
T Consensus 47 TQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~---------------------------------~~FgE 93 (264)
T PF05096_consen 47 TQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPP---------------------------------RYFGE 93 (264)
T ss_dssp EEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TT---------------------------------T--EE
T ss_pred CccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCc---------------------------------cccce
Confidence 45577767787777777655 68888888877654331100 00111
Q ss_pred cEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceee
Q psy14815 92 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYEC 171 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 171 (479)
.++ .. +++...-.-.++...+||..+-+......+. +.=..++ .+++.|+.......+.++|..+.+....
T Consensus 94 Git---~~-~d~l~qLTWk~~~~f~yd~~tl~~~~~~~y~---~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~ 164 (264)
T PF05096_consen 94 GIT---IL-GDKLYQLTWKEGTGFVYDPNTLKKIGTFPYP---GEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRT 164 (264)
T ss_dssp EEE---EE-TTEEEEEESSSSEEEEEETTTTEEEEEEE-S---SS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEE
T ss_pred eEE---EE-CCEEEEEEecCCeEEEEccccceEEEEEecC---CcceEEE--cCCCEEEEECCccceEEECCcccceEEE
Confidence 111 11 1223333345789999999987644333333 3345665 4677788877778899999877654333
Q ss_pred eeeeecccc---ceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEe-eeee----------cCCCccEEEEEEccCC
Q psy14815 172 AAVINAHIQ---DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN-FATL----------KSHTSTVWSLAFDRIG 237 (479)
Q Consensus 172 ~~~~~~~~~---~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~----------~~~~~~v~~~~~~~~~ 237 (479)
+... .... .++.+.|- +|...|=.-....|...|..++...... +..+ .....-.+.++|+|..
T Consensus 165 i~V~-~~g~pv~~LNELE~i-~G~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~ 242 (264)
T PF05096_consen 165 IQVT-DNGRPVSNLNELEYI-NGKIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPET 242 (264)
T ss_dssp EE-E-ETTEE---EEEEEEE-TTEEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTT
T ss_pred EEEE-ECCEECCCcEeEEEE-cCEEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCC
Confidence 3322 2222 34556665 4554444444555666666665531100 0000 0113567999999887
Q ss_pred CEEEEee
Q psy14815 238 SRLATCS 244 (479)
Q Consensus 238 ~~l~s~~ 244 (479)
+.|+..+
T Consensus 243 ~~l~vTG 249 (264)
T PF05096_consen 243 DRLFVTG 249 (264)
T ss_dssp TEEEEEE
T ss_pred CEEEEEe
Confidence 7665554
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118 | Back alignment and domain information |
|---|
Probab=92.65 E-value=7.4 Score=35.03 Aligned_cols=210 Identities=12% Similarity=0.122 Sum_probs=114.1
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECC------CCeEEEeEEEeC-----CCCcEEEEEEcCCCC-----------
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKR------SGQFECNATLEG-----HENEVKSVTWSKNGQ----------- 147 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~------~~~~~~~~~~~~-----~~~~v~~l~~~~~~~----------- 147 (479)
-..-+.|+++|.+.+-++....+...+||.. ..+ ..+..+.. .....+.+.|+....
T Consensus 22 L~N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~-~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~ 100 (336)
T TIGR03118 22 LRNAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQD-PLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGP 100 (336)
T ss_pred ccccceeEecCCCCEEEecCCcceEEeecCCcccccCCcc-ceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccc
Confidence 3456789999999888888888999999986 122 12233331 123567777774322
Q ss_pred -EEEEEeCCCcEEEEEeCCCCce--eeeeeee-ccccc-eeEEEEec--CCCEEEEE-EcCCcEEEEecCCcccceEe-e
Q psy14815 148 -FLATCSRDKSVWVWEVGEEDEY--ECAAVIN-AHIQD-VKKVRFHP--FDNILASA-SYDDTVKLFKEDKAEADWIN-F 218 (479)
Q Consensus 148 -~l~~~~~dg~i~vwd~~~~~~~--~~~~~~~-~~~~~-v~~l~~~~--~~~~l~~~-~~dg~i~i~d~~~~~~~~~~-~ 218 (479)
.++.+++||+|.-|.-.-.... .....+. ..... -..+++.. .+++|..+ -..++|.+||-.-......- .
T Consensus 101 a~Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F 180 (336)
T TIGR03118 101 SRFLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSF 180 (336)
T ss_pred eeEEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCc
Confidence 3677889999999985433210 1111121 11122 33555553 24555444 46889999986532210000 0
Q ss_pred --eeecCCC-----------ccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc-ccc
Q psy14815 219 --ATLKSHT-----------STVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGR 284 (479)
Q Consensus 219 --~~~~~~~-----------~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 284 (479)
-.+...- -.|+-..-.++...=+.|..-|.|-+||+ .+..++++... .-.
T Consensus 181 ~DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~----------------~G~l~~r~as~g~LN 244 (336)
T TIGR03118 181 IDPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTL----------------NGQLLRRVASSGRLN 244 (336)
T ss_pred cCCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcC----------------CCcEEEEeccCCccc
Confidence 0000000 01111111222222233444567888875 23445555321 233
Q ss_pred cEEEEEecC------CCCeEEEEeCCCeEEEcccCCCC
Q psy14815 285 TIYDISWCH------LTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 285 ~i~~l~~~~------~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
.-+.|+..| .+.+|+---.||+|..||..+++
T Consensus 245 aPWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~sG~ 282 (336)
T TIGR03118 245 APWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQSGA 282 (336)
T ss_pred CCceeeeChhhhCCCCCCeEEeecCCceeEEecCCCCc
Confidence 456676655 46677766679999999998876
|
This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus. |
| >PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []) | Back alignment and domain information |
|---|
Probab=92.57 E-value=2.8 Score=34.82 Aligned_cols=30 Identities=20% Similarity=0.484 Sum_probs=25.9
Q ss_pred CcEEEEEECCCC------CEEEEEECCCeEEEEECC
Q psy14815 91 RTIRETAWSPCG------NFIASASFDATTAVWDKR 120 (479)
Q Consensus 91 ~~v~~v~~~~~~------~~l~t~~~dg~i~iwd~~ 120 (479)
..+.+++|||.| .+|++.+.++.|.||...
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~ 121 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPP 121 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecC
Confidence 489999999954 688999999999999866
|
The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 []. |
| >PF14761 HPS3_N: Hermansky-Pudlak syndrome 3 | Back alignment and domain information |
|---|
Probab=92.12 E-value=5.1 Score=34.11 Aligned_cols=121 Identities=17% Similarity=0.251 Sum_probs=69.7
Q ss_pred CEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCC------CeEEEE---eccCCCCCC-
Q psy14815 192 NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD------ATVKIW---KEYKPGNSA- 261 (479)
Q Consensus 192 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d------g~i~iw---d~~~~~~~~- 261 (479)
..|+.+.....|.+|++..... .....+..- +.|..+.++..|++|+|-=.+ ..+|+| +.....+..
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~--~~~~~F~Tv-~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v 105 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEEC--PLLCTFSTV-GRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPV 105 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCC--ceeEEEcch-hheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcE
Confidence 4555556677899999984333 344455443 789999999999999986322 256665 322111110
Q ss_pred C-------CCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 262 G-------IPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 262 ~-------~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
. ...+........+..++-.-..++.+++..|...-|+.|+ ++++.+|.+....
T Consensus 106 ~vRiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~-~~~l~lf~l~~~~ 166 (215)
T PF14761_consen 106 RVRIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGC-GNKLVLFTLKYQT 166 (215)
T ss_pred EEEEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEc-CCEEEEEEEEEEE
Confidence 0 0001111111123333333355788888888655566665 4689999877654
|
|
| >COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.75 E-value=0.58 Score=43.87 Aligned_cols=226 Identities=12% Similarity=0.086 Sum_probs=116.8
Q ss_pred CCCEEEEEECCCeEEEEECCCCeE--EEeEEEeCCCCcEEEEEEcCCCC--------EEEEEeCCCcEEEEEeCCC----
Q psy14815 101 CGNFIASASFDATTAVWDKRSGQF--ECNATLEGHENEVKSVTWSKNGQ--------FLATCSRDKSVWVWEVGEE---- 166 (479)
Q Consensus 101 ~~~~l~t~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~l~~~~~~~--------~l~~~~~dg~i~vwd~~~~---- 166 (479)
....++.|..+|.+.+....-... .+-..+... -.-++..+.|+ +.+..+.+....++|....
T Consensus 126 gqp~~alglsngqv~v~qp~~s~t~p~pg~~Fp~g---~~p~aLd~qgr~leh~~~~lalA~~~~~qf~~~~~t~~~~~L 202 (733)
T COG4590 126 GQPWFALGLSNGQVAVVQPQLSHTMPTPGREFPPG---LEPLALDEQGRLLEHPLQQLALALTAEAQFATYDNTQQIQIL 202 (733)
T ss_pred CCceEEEeccCCeEEEEeccccccCCCCCccCCCC---CCccccCcccCcccchHHHhhhccchhhHHHHhhhhhhhhhh
Confidence 457889999999999886432110 001111110 01111222221 2333444444444443321
Q ss_pred -----CceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCC--CccEE-EEEEccCCC
Q psy14815 167 -----DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSH--TSTVW-SLAFDRIGS 238 (479)
Q Consensus 167 -----~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~--~~~v~-~~~~~~~~~ 238 (479)
.+.+.+..+.....++..+-..|+|+.+..-+. .++.++++.+.....+.+...... ...|+ .+..-..|.
T Consensus 203 ~g~~t~q~e~i~~L~~~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~ 281 (733)
T COG4590 203 RGDRTTQQEIIRLLSVPFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGF 281 (733)
T ss_pred hcccCchhhhhhhcCCCccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCce
Confidence 111233334455567888889999998877665 678899887654321111111000 01122 122223456
Q ss_pred EEEEeeCCCeEEEE-eccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCC
Q psy14815 239 RLATCSDDATVKIW-KEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAG 317 (479)
Q Consensus 239 ~l~s~~~dg~i~iw-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~ 317 (479)
.++.++.||.|.-| |.++...+. ...++.++-. ..++..+.-..+.+-+++-...|++.++.....+
T Consensus 282 SLLv~~~dG~vsQWFdvr~~~~p~----------l~h~R~f~l~-pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~- 349 (733)
T COG4590 282 SLLVVHEDGLVSQWFDVRRDGQPH----------LNHIRNFKLA-PAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEK- 349 (733)
T ss_pred eEEEEcCCCceeeeeeeecCCCCc----------ceeeeccccC-cccceeeccccccceEEEEcCCCceeeeecccCc-
Confidence 78889999999887 555443321 1222333322 3344444433445567777788888887655543
Q ss_pred CCCceeeEEEeccccccccceeEEEecCCCCCCCc
Q psy14815 318 DSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 318 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~ 352 (479)
.+... .--..+.-+++||.+.+|..
T Consensus 350 --------~lL~~--~~~~~~~~~~~Sp~~~~Ll~ 374 (733)
T COG4590 350 --------LLLFE--RAYQAPQLVAMSPNQAYLLS 374 (733)
T ss_pred --------ceehh--hhhcCcceeeeCcccchhee
Confidence 12111 11235667899999998843
|
|
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=91.70 E-value=4.3 Score=39.16 Aligned_cols=27 Identities=15% Similarity=0.122 Sum_probs=20.8
Q ss_pred ceeEEEEecCCCEEEEEEcCCcEEEEe
Q psy14815 181 DVKKVRFHPFDNILASASYDDTVKLFK 207 (479)
Q Consensus 181 ~v~~l~~~~~~~~l~~~~~dg~i~i~d 207 (479)
.|..+..++.|..++-.+.+|.+..+=
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vMeL 131 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVMEL 131 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEEEc
Confidence 467788889999888888888665543
|
|
| >PRK04247 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=91.42 E-value=8.9 Score=33.32 Aligned_cols=181 Identities=13% Similarity=0.115 Sum_probs=102.2
Q ss_pred cCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCC
Q psy14815 189 PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDN 268 (479)
Q Consensus 189 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 268 (479)
+.+..++..=.||++.|.+-+..++ +.|.|-+..+...-.+|.+.+|..+.....
T Consensus 47 ~~g~RliivKpDGsvlVH~~~~ykP-----------------vNW~~p~s~~~~~~~~g~~~l~~~r~k~~E-------- 101 (238)
T PRK04247 47 GPGDRLIIIKPDGTFLVHEDEKREP-----------------VNWQPPGSKTEAYVDDGRLVLESIRRRPKE-------- 101 (238)
T ss_pred CCCcEEEEEeCCCcEEEeCCCCcCC-----------------cccCCCCcEEEEEecCCceEEEEEecCCCC--------
Confidence 4577788888889888887643222 356555555555545778889988653221
Q ss_pred CCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEE-EcccCCCCCCCCceeeEEEeccccccccceeEEEecCCC
Q psy14815 269 DSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIR-IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347 (479)
Q Consensus 269 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~-vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~ 347 (479)
.. .+..+.-..+.......+..+...|++..--. +++-- ......+.++........++|--++..++|
T Consensus 102 ----~L--~V~~~~v~~~~~~~~~~~~~l~~~g~E~~Lq~~l~~np----~li~~G~~~l~rE~~t~~G~IDila~D~~G 171 (238)
T PRK04247 102 ----RL--EVRFHEVYYVTAFDVEDYEELELTGSEADMVDRILENP----DLIEEGFRPLAREYPTPAGIIDILGRDKDG 171 (238)
T ss_pred ----EE--EEEEEEEEEEEEEecccCCCcEEeccHHHHHHHHHhCH----HHHcCCCEEEEEecccCCCceeEEEECCCC
Confidence 11 11111111233333333445566665431100 11000 000112344555554556788889999998
Q ss_pred CCCCc-------ccccHHHHHHHHHHhCCCccCCCCCcceeeeccCCCcCcccEEEEEecCCHHHHHHHHHcCCCEEEEe
Q psy14815 348 PEPQK-------TNLTLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIAY 420 (479)
Q Consensus 348 ~~l~~-------~~~~~~~~~~~l~~~~p~~~a~~wd~~Gl~v~~~~~~~~v~~il~~~d~t~~~~~~a~~~~~~~i~~~ 420 (479)
..+.. ..--+.++.+.++.+.. ...++|++++++-+.++...+-|.++|-.++...
T Consensus 172 ~lViVEvKrr~~~~~~V~Ql~rY~~~~~~-----------------~~~~~VRGilvAp~i~~~A~~ll~~~Gle~~~l~ 234 (238)
T PRK04247 172 NLVVLELKRRRAGLSAVSQLKRYVEALRE-----------------LHGDKVRGILVAPSITDRARRLLEKEGLEFVKLE 234 (238)
T ss_pred CEEEEEEEEccCChhHHHHHHHHHHHHHh-----------------hcCCCcEEEEECCcCCHHHHHHHHHcCCeEEEec
Confidence 76621 11234555566655421 0115799999999999999999999998877544
Q ss_pred C
Q psy14815 421 H 421 (479)
Q Consensus 421 h 421 (479)
.
T Consensus 235 p 235 (238)
T PRK04247 235 P 235 (238)
T ss_pred C
Confidence 3
|
|
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=91.19 E-value=6.9 Score=36.53 Aligned_cols=248 Identities=16% Similarity=0.121 Sum_probs=115.7
Q ss_pred cEEEEEECCCCCEEEEEECCCeEEEEECCCCeE-EEeEEE----eCCCCcEEEEEEcCC---CCEEEEEeCC--------
Q psy14815 92 TIRETAWSPCGNFIASASFDATTAVWDKRSGQF-ECNATL----EGHENEVKSVTWSKN---GQFLATCSRD-------- 155 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~-~~~~~~----~~~~~~v~~l~~~~~---~~~l~~~~~d-------- 155 (479)
..+.|+|.|+++++++ ...|.|++++ ..+.. ..+..+ .........++++|+ ..+|++....
T Consensus 3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~ 80 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDN 80 (331)
T ss_dssp SEEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSE
T ss_pred CceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCc
Confidence 4678999999877665 5589999999 44542 222232 123456789999994 3344444331
Q ss_pred -CcEEEEEeCCC-Cc---e-eeeeeeec---cccceeEEEEecCCCEEEEEEcCC-------------cEEEEecCCccc
Q psy14815 156 -KSVWVWEVGEE-DE---Y-ECAAVINA---HIQDVKKVRFHPFDNILASASYDD-------------TVKLFKEDKAEA 213 (479)
Q Consensus 156 -g~i~vwd~~~~-~~---~-~~~~~~~~---~~~~v~~l~~~~~~~~l~~~~~dg-------------~i~i~d~~~~~~ 213 (479)
..|.-|..... .. . ..+..... ....-..|.|.|+|.+.++.+..+ .|.-.+....-.
T Consensus 81 ~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~~~~~~~~~~~~G~ilri~~dG~~p 160 (331)
T PF07995_consen 81 DNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGNDDNAQDPNSLRGKILRIDPDGSIP 160 (331)
T ss_dssp EEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTTGGGGCSTTSSTTEEEEEETTSSB-
T ss_pred ceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCCcccccccccccceEEEecccCcCC
Confidence 23444555433 11 1 11111121 233456799999997777665433 233333221100
Q ss_pred ceE---------eeeeecCCCccEEEEEEccC-CCEEEE-eeCCCeEEEEeccCCCCCCCCCC---------------CC
Q psy14815 214 DWI---------NFATLKSHTSTVWSLAFDRI-GSRLAT-CSDDATVKIWKEYKPGNSAGIPT---------------PD 267 (479)
Q Consensus 214 ~~~---------~~~~~~~~~~~v~~~~~~~~-~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~---------------~~ 267 (479)
... ...--.++.. ...++|+|. |.++++ -+.++.=.|--+..+... ..+. ..
T Consensus 161 ~dnP~~~~~~~~~~i~A~GlRN-~~~~~~d~~tg~l~~~d~G~~~~dein~i~~G~nY-GWP~~~~~~~~~~~~~~~~~~ 238 (331)
T PF07995_consen 161 ADNPFVGDDGADSEIYAYGLRN-PFGLAFDPNTGRLWAADNGPDGWDEINRIEPGGNY-GWPYCEGGPKYSGPPIGDAPS 238 (331)
T ss_dssp TTSTTTTSTTSTTTEEEE--SE-EEEEEEETTTTEEEEEEE-SSSSEEEEEE-TT-B---TTTBSSSCSTTSS-ECTGSS
T ss_pred CCCccccCCCceEEEEEeCCCc-cccEEEECCCCcEEEEccCCCCCcEEEEeccCCcC-CCCCCcCCCCCCCCccccccC
Confidence 000 0000112222 357899998 554433 223333333333332210 0000 00
Q ss_pred CCCceEEEEEEeccccccEEEEEecCC-------CCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeE
Q psy14815 268 NDSVWKCVCTLSGHHGRTIYDISWCHL-------TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNC 340 (479)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~i~~l~~~~~-------~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 340 (479)
......+...+..| ..+..+.|... +.++++.-..+.|....++.... ..-...+.......+..
T Consensus 239 ~~~~~~P~~~~~~~--~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~~~r~~~ 310 (331)
T PF07995_consen 239 CPGFVPPVFAYPPH--SAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGS------VTEEEEFLGGFGGRPRD 310 (331)
T ss_dssp -TTS---SEEETTT----EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEE------EEEEEEECTTSSS-EEE
T ss_pred CCCcCccceeecCc--cccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCC------ccceEEccccCCCCceE
Confidence 01112334444443 46777777643 44666655566777777754420 11122222345558999
Q ss_pred EEecCCCCCCC
Q psy14815 341 VAWNPVVPEPQ 351 (479)
Q Consensus 341 ~~~sp~~~~l~ 351 (479)
+++.|||.+..
T Consensus 311 v~~~pDG~Lyv 321 (331)
T PF07995_consen 311 VAQGPDGALYV 321 (331)
T ss_dssp EEEETTSEEEE
T ss_pred EEEcCCCeEEE
Confidence 99999997653
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >TIGR03547 muta_rot_YjhT mutatrotase, YjhT family | Back alignment and domain information |
|---|
Probab=91.13 E-value=13 Score=34.83 Aligned_cols=119 Identities=13% Similarity=0.068 Sum_probs=59.1
Q ss_pred CCCEEEEEECC-----------CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC--------------
Q psy14815 101 CGNFIASASFD-----------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-------------- 155 (479)
Q Consensus 101 ~~~~l~t~~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-------------- 155 (479)
++.+.+.|+.+ ..+..||..++++..+.........-.+....-+++..+.|+.+
T Consensus 63 ~~~iYv~GG~~~~~~~~~~~~~~~v~~Yd~~~~~W~~~~~~~p~~~~~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~ 142 (346)
T TIGR03547 63 DGKLYVFGGIGKANSEGSPQVFDDVYRYDPKKNSWQKLDTRSPVGLLGASGFSLHNGQAYFTGGVNKNIFDGYFADLSAA 142 (346)
T ss_pred CCEEEEEeCCCCCCCCCcceecccEEEEECCCCEEecCCCCCCCcccceeEEEEeCCEEEEEcCcChHHHHHHHhhHhhc
Confidence 45566666642 25778899888776543211111111111112367777777654
Q ss_pred -------------------------CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCC------cEE
Q psy14815 156 -------------------------KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD------TVK 204 (479)
Q Consensus 156 -------------------------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg------~i~ 204 (479)
..+.+||..+. .+..+..+......-.+++ .-++++.+.|+.+. .+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~YDp~t~-~W~~~~~~p~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~ 220 (346)
T TIGR03547 143 DKDSEPKDKLIAAYFSQPPEDYFWNKNVLSYDPSTN-QWRNLGENPFLGTAGSAIV-HKGNKLLLINGEIKPGLRTAEVK 220 (346)
T ss_pred CccchhhhhhHHHHhCCChhHcCccceEEEEECCCC-ceeECccCCCCcCCCceEE-EECCEEEEEeeeeCCCccchheE
Confidence 45788888764 3333332221111111222 23577777777532 245
Q ss_pred EEecCCcccceEeeeee
Q psy14815 205 LFKEDKAEADWINFATL 221 (479)
Q Consensus 205 i~d~~~~~~~~~~~~~~ 221 (479)
.|+++.....|..+..+
T Consensus 221 ~y~~~~~~~~W~~~~~m 237 (346)
T TIGR03547 221 QYLFTGGKLEWNKLPPL 237 (346)
T ss_pred EEEecCCCceeeecCCC
Confidence 56665444445544443
|
Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein. |
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=91.06 E-value=22 Score=37.09 Aligned_cols=115 Identities=13% Similarity=0.128 Sum_probs=67.0
Q ss_pred CcEEEEEECCCCCEEEEEECC-----CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC------CcEE
Q psy14815 91 RTIRETAWSPCGNFIASASFD-----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD------KSVW 159 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d------g~i~ 159 (479)
-.+..+.|+|++++|+.+... ..|++.|+.++... ...+.. . -..++|.+|++.|+....+ ..|.
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l-~~~i~~-~--~~~~~w~~D~~~~~y~~~~~~~~~~~~v~ 202 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWY-PELLDN-V--EPSFVWANDSWTFYYVRKHPVTLLPYQVW 202 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCC-CccccC-c--ceEEEEeeCCCEEEEEEecCCCCCCCEEE
Confidence 457778999999988876442 37889999887521 122221 1 1469999998877665443 2577
Q ss_pred EEEeCCCCceeeeeeeecccccee-EEEEecCCCEEEEEEc---CCcEEEEecCC
Q psy14815 160 VWEVGEEDEYECAAVINAHIQDVK-KVRFHPFDNILASASY---DDTVKLFKEDK 210 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~~~~~v~-~l~~~~~~~~l~~~~~---dg~i~i~d~~~ 210 (479)
.+++.+.... -...+........ ....+.++++++..+. ++.+.+++...
T Consensus 203 ~h~lgt~~~~-d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~ 256 (686)
T PRK10115 203 RHTIGTPASQ-DELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAEL 256 (686)
T ss_pred EEECCCChhH-CeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcC
Confidence 7777766211 1112222222222 2333447777665543 35688888543
|
|
| >PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal | Back alignment and domain information |
|---|
Probab=90.98 E-value=6.2 Score=30.73 Aligned_cols=118 Identities=8% Similarity=0.020 Sum_probs=69.0
Q ss_pred EEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEE
Q psy14815 15 WNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 94 (479)
Q Consensus 15 ~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~ 94 (479)
..-.|......|+.++.-|.|.|++.........- .++.+++.++ ...|+
T Consensus 2 aiGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~-------------~~~~i~~LNi-----------------n~~it 51 (136)
T PF14781_consen 2 AIGKFDGVHPCLACATTGGKVFIHNPHERGQRTGR-------------QDSDISFLNI-----------------NQEIT 51 (136)
T ss_pred eEEEeCCCceeEEEEecCCEEEEECCCcccccccc-------------ccCceeEEEC-----------------CCceE
Confidence 34466666778888888889999976543322110 2333333333 34566
Q ss_pred EEEECC-----CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC---CCCEEEEEeCCCcEEEEEeCCC
Q psy14815 95 ETAWSP-----CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK---NGQFLATCSRDKSVWVWEVGEE 166 (479)
Q Consensus 95 ~v~~~~-----~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~---~~~~l~~~~~dg~i~vwd~~~~ 166 (479)
+++-.+ +...|+.|+. ..+..||+....- ..++.-.+.|.++.+-. ...-++..+.+..|.-||....
T Consensus 52 alaaG~l~~~~~~D~LliGt~-t~llaYDV~~N~d---~Fyke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~ 127 (136)
T PF14781_consen 52 ALAAGRLKPDDGRDCLLIGTQ-TSLLAYDVENNSD---LFYKEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGN 127 (136)
T ss_pred EEEEEecCCCCCcCEEEEecc-ceEEEEEcccCch---hhhhhCccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCc
Confidence 665433 3456777765 6899999988742 22333446677777633 2233444445567777776654
|
|
| >TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family | Back alignment and domain information |
|---|
Probab=90.33 E-value=11 Score=36.54 Aligned_cols=111 Identities=9% Similarity=0.119 Sum_probs=63.5
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe-----CCCCcEEEEEEcCCC------CEEEEEe-----
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE-----GHENEVKSVTWSKNG------QFLATCS----- 153 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~-----~~~~~v~~l~~~~~~------~~l~~~~----- 153 (479)
-...+.|+|.|++++|++--..|.|++++..++.......+. ........|+++|+- .+|+...
T Consensus 29 L~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~~~ 108 (454)
T TIGR03606 29 LNKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYKNG 108 (454)
T ss_pred CCCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEeccCC
Confidence 456788999999988777765699999987655322222111 135678899999874 2444442
Q ss_pred -----CCCcEEEEEeCCCC-----ceeeeeeee-ccccceeEEEEecCCCEEEEEEcC
Q psy14815 154 -----RDKSVWVWEVGEED-----EYECAAVIN-AHIQDVKKVRFHPFDNILASASYD 200 (479)
Q Consensus 154 -----~dg~i~vwd~~~~~-----~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~~d 200 (479)
....|.-|.+.... ....+..+. .....-..|.|.|+|.+.++.+..
T Consensus 109 ~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgPDG~LYVs~GD~ 166 (454)
T TIGR03606 109 DKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGPDGKIYYTIGEQ 166 (454)
T ss_pred CCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECCCCcEEEEECCC
Confidence 12335555554211 011111111 001224578899999877765544
|
PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis. |
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=90.31 E-value=7.1 Score=37.62 Aligned_cols=144 Identities=11% Similarity=0.042 Sum_probs=86.1
Q ss_pred CCCCEEEE-EECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCC-------EEEEEeCCCcEEEEEeCCCCceee
Q psy14815 100 PCGNFIAS-ASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ-------FLATCSRDKSVWVWEVGEEDEYEC 171 (479)
Q Consensus 100 ~~~~~l~t-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-------~l~~~~~dg~i~vwd~~~~~~~~~ 171 (479)
.+..+|.. |+....+.-.|++.|+ .+.....|.. | -+.|.|+.+ .-++|-.+..|.-.|.+-......
T Consensus 477 ~dssli~~dg~~~~kLykmDIErGk--vveeW~~~dd-v-vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~ 552 (776)
T COG5167 477 NDSSLIYLDGGERDKLYKMDIERGK--VVEEWDLKDD-V-VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIK 552 (776)
T ss_pred CCcceEEecCCCcccceeeecccce--eeeEeecCCc-c-eeecCCchhHHhcCccceEEeecccceEEecccccCCcee
Confidence 34444443 4445567777888886 4445554444 3 567777432 234555566665556664431111
Q ss_pred eeeeeccccceeEEEEec----CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCC
Q psy14815 172 AAVINAHIQDVKKVRFHP----FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 247 (479)
Q Consensus 172 ~~~~~~~~~~v~~l~~~~----~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 247 (479)
+... ...++.-.|+. .+.++++|+..|.|++||.-... ....+.+....|..+..+.+|+++++.+ ..
T Consensus 553 v~es---KdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~r----AKtalP~lG~aIk~idvta~Gk~ilaTC-k~ 624 (776)
T COG5167 553 VVES---KDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKR----AKTALPGLGDAIKHIDVTANGKHILATC-KN 624 (776)
T ss_pred eeee---hhccccccccccccccCceEEEecCCCceeeehhhcch----hhhcCcccccceeeeEeecCCcEEEEee-cc
Confidence 1111 12222222332 34689999999999999975332 2345667778899999999999987665 45
Q ss_pred eEEEEecc
Q psy14815 248 TVKIWKEY 255 (479)
Q Consensus 248 ~i~iwd~~ 255 (479)
.+.+-|++
T Consensus 625 yllL~d~~ 632 (776)
T COG5167 625 YLLLTDVP 632 (776)
T ss_pred eEEEEecc
Confidence 68888764
|
|
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=90.22 E-value=2.5 Score=36.68 Aligned_cols=66 Identities=15% Similarity=0.272 Sum_probs=44.3
Q ss_pred CCCCCEEEEEECCCeEEEEECCCCeEEEeE-----EEe-------CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCC
Q psy14815 99 SPCGNFIASASFDATTAVWDKRSGQFECNA-----TLE-------GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 99 ~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~-----~~~-------~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~ 165 (479)
..+++++++.+.+|.+++||+.+++..... .+. .....|..+.++.+|.-+++-+ +|....|+..-
T Consensus 19 ~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L 96 (219)
T PF07569_consen 19 ECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDL 96 (219)
T ss_pred EeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccc
Confidence 346889999999999999999988632111 011 2445677777777776665543 46777777654
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >PLN00033 photosystem II stability/assembly factor; Provisional | Back alignment and domain information |
|---|
Probab=90.09 E-value=18 Score=34.63 Aligned_cols=152 Identities=13% Similarity=0.199 Sum_probs=81.9
Q ss_pred EEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCcee--
Q psy14815 93 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE-- 170 (479)
Q Consensus 93 v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~-- 170 (479)
...+..++++.+++.+..-..++-||--...+... .. .....++++.|.+++..++++ .+|.+.. ....+....
T Consensus 241 f~~v~~~~dG~~~~vg~~G~~~~s~d~G~~~W~~~-~~-~~~~~l~~v~~~~dg~l~l~g-~~G~l~~-S~d~G~~~~~~ 316 (398)
T PLN00033 241 FSTVNRSPDGDYVAVSSRGNFYLTWEPGQPYWQPH-NR-ASARRIQNMGWRADGGLWLLT-RGGGLYV-SKGTGLTEEDF 316 (398)
T ss_pred eeeEEEcCCCCEEEEECCccEEEecCCCCcceEEe-cC-CCccceeeeeEcCCCCEEEEe-CCceEEE-ecCCCCccccc
Confidence 44456677777766665433333344322111211 22 234568899999998877665 5566543 333332111
Q ss_pred eeeeeec--cccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCe
Q psy14815 171 CAAVINA--HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 248 (479)
Q Consensus 171 ~~~~~~~--~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~ 248 (479)
....... ....+..+.|.+++..+ .++..|.+.... ..++ .|........-....+.+.|.++++-+++ +.+|.
T Consensus 317 ~f~~~~~~~~~~~l~~v~~~~d~~~~-a~G~~G~v~~s~-D~G~-tW~~~~~~~~~~~~ly~v~f~~~~~g~~~-G~~G~ 392 (398)
T PLN00033 317 DFEEADIKSRGFGILDVGYRSKKEAW-AAGGSGILLRST-DGGK-SWKRDKGADNIAANLYSVKFFDDKKGFVL-GNDGV 392 (398)
T ss_pred ceeecccCCCCcceEEEEEcCCCcEE-EEECCCcEEEeC-CCCc-ceeEccccCCCCcceeEEEEcCCCceEEE-eCCcE
Confidence 1111111 12358889998777655 455667665553 3333 44443322334567889999876665554 46787
Q ss_pred EEEE
Q psy14815 249 VKIW 252 (479)
Q Consensus 249 i~iw 252 (479)
|.-|
T Consensus 393 il~~ 396 (398)
T PLN00033 393 LLRY 396 (398)
T ss_pred EEEe
Confidence 7655
|
|
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=89.98 E-value=12 Score=32.31 Aligned_cols=137 Identities=12% Similarity=0.168 Sum_probs=80.0
Q ss_pred CCcEEEEEECCCCCEEEEEEC-C---------CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEE-eCCCcE
Q psy14815 90 QRTIRETAWSPCGNFIASASF-D---------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC-SRDKSV 158 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~-d---------g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i 158 (479)
....+.-..+|+|+++ .|.. | |.++.|-... +.. .+...-.--..++|+.+.+.++.- +.+-.|
T Consensus 108 knR~NDgkvdP~Gryy-~GtMad~~~~le~~~g~Ly~~~~~h-~v~---~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V 182 (310)
T KOG4499|consen 108 KNRLNDGKVDPDGRYY-GGTMADFGDDLEPIGGELYSWLAGH-QVE---LIWNCVGISNGLAWDSDAKKFYYIDSLNYEV 182 (310)
T ss_pred hcccccCccCCCCcee-eeeeccccccccccccEEEEeccCC-Cce---eeehhccCCccccccccCcEEEEEccCceEE
Confidence 5566777888999884 3332 1 3444443321 111 111111233578898877766544 456677
Q ss_pred EEEE--eCCCCce--eeeeeeec---ccc-ceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEE
Q psy14815 159 WVWE--VGEEDEY--ECAAVINA---HIQ-DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWS 230 (479)
Q Consensus 159 ~vwd--~~~~~~~--~~~~~~~~---~~~-~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~ 230 (479)
.-|| ..++... ..+..+.. ... .--.++...+|++.++.-..++|.-+|..+++. +.++.-....|++
T Consensus 183 ~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~----L~eiklPt~qits 258 (310)
T KOG4499|consen 183 DAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKI----LLEIKLPTPQITS 258 (310)
T ss_pred eeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcE----EEEEEcCCCceEE
Confidence 7777 4443211 11111111 111 112355566788888888899999999998875 5666666889999
Q ss_pred EEEcc
Q psy14815 231 LAFDR 235 (479)
Q Consensus 231 ~~~~~ 235 (479)
++|--
T Consensus 259 ccFgG 263 (310)
T KOG4499|consen 259 CCFGG 263 (310)
T ss_pred EEecC
Confidence 99963
|
|
| >KOG1900|consensus | Back alignment and domain information |
|---|
Probab=89.65 E-value=35 Score=37.25 Aligned_cols=143 Identities=15% Similarity=0.221 Sum_probs=84.0
Q ss_pred CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEc-C-------CCCEEEEEeCCCcEEEEEeCCCCceeeeee------e
Q psy14815 110 FDATTAVWDKRSGQFECNATLEGHENEVKSVTWS-K-------NGQFLATCSRDKSVWVWEVGEEDEYECAAV------I 175 (479)
Q Consensus 110 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~-~-------~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~------~ 175 (479)
-|+.+.+|+.+++. ....+.+-...|..+..- | .=+++++-+.--.|.++-+.-.+....... +
T Consensus 97 iDn~L~lWny~~~~--e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i 174 (1311)
T KOG1900|consen 97 IDNNLFLWNYESDN--ELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKI 174 (1311)
T ss_pred eCCeEEEEEcCCCC--ccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceee
Confidence 47899999999854 344455545555555432 2 223444444445566665543221111111 2
Q ss_pred eccccceeEEEEecCCCEEEEEEcCCcEEEEecC--CcccceE-------------------eeeeec-CCCccEEEEEE
Q psy14815 176 NAHIQDVKKVRFHPFDNILASASYDDTVKLFKED--KAEADWI-------------------NFATLK-SHTSTVWSLAF 233 (479)
Q Consensus 176 ~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~--~~~~~~~-------------------~~~~~~-~~~~~v~~~~~ 233 (479)
......|+|+....+|+.+++| .|| .+|.+. ... .|. .+.++. .+..+|..+..
T Consensus 175 ~~dg~~V~~I~~t~nGRIF~~G-~dg--~lyEl~Yq~~~-gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~I 250 (1311)
T KOG1900|consen 175 SVDGVSVNCITYTENGRIFFAG-RDG--NLYELVYQAED-GWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITI 250 (1311)
T ss_pred ecCCceEEEEEeccCCcEEEee-cCC--CEEEEEEeccC-chhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEe
Confidence 2234568899977788766655 555 444431 111 000 012223 56779999999
Q ss_pred ccCCCEEEEeeCCCeEEEEeccCCC
Q psy14815 234 DRIGSRLATCSDDATVKIWKEYKPG 258 (479)
Q Consensus 234 ~~~~~~l~s~~~dg~i~iwd~~~~~ 258 (479)
....+.+++-+..|+|.+||+...+
T Consensus 251 D~SR~IlY~lsek~~v~~Y~i~~~G 275 (1311)
T KOG1900|consen 251 DNSRNILYVLSEKGTVSAYDIGGNG 275 (1311)
T ss_pred ccccceeeeeccCceEEEEEccCCC
Confidence 9888899999999999999997643
|
|
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=89.64 E-value=30 Score=36.42 Aligned_cols=219 Identities=10% Similarity=0.094 Sum_probs=108.7
Q ss_pred CCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCC
Q psy14815 23 GTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCG 102 (479)
Q Consensus 23 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~ 102 (479)
+..++.++.++.|.-.|..+|+.+-++..............-+.+.+|+...... .......- ...+
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~-----------~~~~~~~p--~~~~ 260 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAA-----------GPAAPAAP--ADCA 260 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccc-----------cccccccc--cccC
Confidence 4567777778888888988888876654332111000000112233333210000 00000000 0135
Q ss_pred CEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcE-------------EEEEEcC--CCCEEEEEeC----------CCc
Q psy14815 103 NFIASASFDATTAVWDKRSGQFECNATLEGHENEV-------------KSVTWSK--NGQFLATCSR----------DKS 157 (479)
Q Consensus 103 ~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v-------------~~l~~~~--~~~~l~~~~~----------dg~ 157 (479)
..++.++.|+.+.-.|.++|+. ...+.. .+.| ..+.-.| .+..+++|+. +|.
T Consensus 261 ~rV~~~T~Dg~LiALDA~TGk~--~W~fg~-~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~ 337 (764)
T TIGR03074 261 RRIILPTSDARLIALDADTGKL--CEDFGN-NGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGV 337 (764)
T ss_pred CEEEEecCCCeEEEEECCCCCE--EEEecC-CCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcE
Confidence 6788888999999999999973 333321 1111 0111122 2345666643 688
Q ss_pred EEEEEeCCCCceeeeeeeec--------------cccce-eEEEEecCCCEEEEEE------------------cCCcEE
Q psy14815 158 VWVWEVGEEDEYECAAVINA--------------HIQDV-KKVRFHPFDNILASAS------------------YDDTVK 204 (479)
Q Consensus 158 i~vwd~~~~~~~~~~~~~~~--------------~~~~v-~~l~~~~~~~~l~~~~------------------~dg~i~ 204 (479)
|+-+|.++++..-....... ....+ ...+++++..++..+. ..+.|.
T Consensus 338 I~A~Da~TGkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slv 417 (764)
T TIGR03074 338 IRAFDVNTGALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLV 417 (764)
T ss_pred EEEEECCCCcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEE
Confidence 99999998853221111000 00011 2345555544444432 124566
Q ss_pred EEecCCcccceEeeeeecCCCc-------cEEEEEEcc-CCC---EEEEeeCCCeEEEEeccCCCC
Q psy14815 205 LFKEDKAEADWINFATLKSHTS-------TVWSLAFDR-IGS---RLATCSDDATVKIWKEYKPGN 259 (479)
Q Consensus 205 i~d~~~~~~~~~~~~~~~~~~~-------~v~~~~~~~-~~~---~l~s~~~dg~i~iwd~~~~~~ 259 (479)
-.|.++++..|... ...|.. +..=+.+.. +|+ .++.++.+|.+.+.|.++++.
T Consensus 418 ALD~~TGk~~W~~Q--~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~ 481 (764)
T TIGR03074 418 ALDATTGKERWVFQ--TVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEP 481 (764)
T ss_pred EEeCCCCceEEEec--ccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCE
Confidence 67777777644322 112211 111112222 453 788899999999999876643
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >PF13449 Phytase-like: Esterase-like activity of phytase | Back alignment and domain information |
|---|
Probab=89.53 E-value=18 Score=33.72 Aligned_cols=104 Identities=13% Similarity=0.141 Sum_probs=59.5
Q ss_pred cEEEEEECCCCCEEEEEECC------CeEEEEECCCCeEEEeEEE-------------eCCCCcEEEEEEcCCCCEEEEE
Q psy14815 92 TIRETAWSPCGNFIASASFD------ATTAVWDKRSGQFECNATL-------------EGHENEVKSVTWSKNGQFLATC 152 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~d------g~i~iwd~~~~~~~~~~~~-------------~~~~~~v~~l~~~~~~~~l~~~ 152 (479)
..-+|++.+++.++++.-.+ ..|..++.. |+......+ ...+....+++++|+|+.|+++
T Consensus 86 D~Egi~~~~~g~~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~ 164 (326)
T PF13449_consen 86 DPEGIAVPPDGSFWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAA 164 (326)
T ss_pred ChhHeEEecCCCEEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEE
Confidence 44467776778777777666 788888866 442111111 1234568899999999977776
Q ss_pred eCC-----C--c-------EEEEEeCCC--C--ceeeeeeeec-----cccceeEEEEecCCCEEEE
Q psy14815 153 SRD-----K--S-------VWVWEVGEE--D--EYECAAVINA-----HIQDVKKVRFHPFDNILAS 196 (479)
Q Consensus 153 ~~d-----g--~-------i~vwd~~~~--~--~~~~~~~~~~-----~~~~v~~l~~~~~~~~l~~ 196 (479)
... + . ++++..... . ..+....+.. ....++.+.+-+++++|+.
T Consensus 165 ~E~~l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvL 231 (326)
T PF13449_consen 165 MESPLKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVL 231 (326)
T ss_pred ECccccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEE
Confidence 542 2 1 455444322 1 1111222221 3456777777777775553
|
|
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=89.09 E-value=2.8 Score=36.36 Aligned_cols=83 Identities=10% Similarity=0.138 Sum_probs=53.2
Q ss_pred ECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEE
Q psy14815 19 WNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 98 (479)
Q Consensus 19 ~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 98 (479)
+..++++|++.+.+|.+++||+.+++.+..-.. ..+.+ +.. . .........|..+.+
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~S--i~pll------------~~~--------~-~~~~~~~~~i~~~~l 74 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVS--IAPLL------------NSS--------P-VSDKSSSPNITSCSL 74 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCcc--HHHHh------------ccc--------c-cccCCCCCcEEEEEE
Confidence 345688999999999999999988765432200 00000 000 0 000145678899999
Q ss_pred CCCCCEEEEEECCCeEEEEECCCCeEE
Q psy14815 99 SPCGNFIASASFDATTAVWDKRSGQFE 125 (479)
Q Consensus 99 ~~~~~~l~t~~~dg~i~iwd~~~~~~~ 125 (479)
+.+|.-+++-+ +|....|+..-+.+.
T Consensus 75 t~~G~PiV~ls-ng~~y~y~~~L~~W~ 100 (219)
T PF07569_consen 75 TSNGVPIVTLS-NGDSYSYSPDLGCWI 100 (219)
T ss_pred cCCCCEEEEEe-CCCEEEeccccceeE
Confidence 98888777665 588899988766544
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >COG4257 Vgb Streptogramin lyase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=88.81 E-value=16 Score=32.34 Aligned_cols=197 Identities=12% Similarity=0.126 Sum_probs=120.7
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 168 (479)
....-..++-.|||..-+++...+.|--.|..+|+.+ ...+ +....-..+..-||+..-++-+.. -|.-.|-++.+.
T Consensus 60 ~G~ap~dvapapdG~VWft~qg~gaiGhLdP~tGev~-~ypL-g~Ga~Phgiv~gpdg~~Witd~~~-aI~R~dpkt~ev 136 (353)
T COG4257 60 NGSAPFDVAPAPDGAVWFTAQGTGAIGHLDPATGEVE-TYPL-GSGASPHGIVVGPDGSAWITDTGL-AIGRLDPKTLEV 136 (353)
T ss_pred CCCCccccccCCCCceEEecCccccceecCCCCCceE-EEec-CCCCCCceEEECCCCCeeEecCcc-eeEEecCcccce
Confidence 3456677888899988888888888888899998732 2222 334455677788888766654433 455556555432
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEEEcC---------CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASASYD---------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d---------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
.+................|.+.|++-+++... +.|++|+... ...-+.|+..|+|..
T Consensus 137 t~f~lp~~~a~~nlet~vfD~~G~lWFt~q~G~yGrLdPa~~~i~vfpaPq--------------G~gpyGi~atpdGsv 202 (353)
T COG4257 137 TRFPLPLEHADANLETAVFDPWGNLWFTGQIGAYGRLDPARNVISVFPAPQ--------------GGGPYGICATPDGSV 202 (353)
T ss_pred EEeecccccCCCcccceeeCCCccEEEeeccccceecCcccCceeeeccCC--------------CCCCcceEECCCCcE
Confidence 12111222334567788999999988887631 2344444332 233467888999988
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
-++.-.++.|-..|..... ...++.+.. ....-..+.-+|.+..-++....+.+..||-....
T Consensus 203 wyaslagnaiaridp~~~~-aev~p~P~~-------------~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~s 265 (353)
T COG4257 203 WYASLAGNAIARIDPFAGH-AEVVPQPNA-------------LKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTS 265 (353)
T ss_pred EEEeccccceEEcccccCC-cceecCCCc-------------ccccccccccCccCcEEEeccCCceeeEeCccccc
Confidence 8776667777777765442 111211110 01223344456778888887777888888766543
|
|
| >PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes | Back alignment and domain information |
|---|
Probab=88.58 E-value=10 Score=33.41 Aligned_cols=141 Identities=9% Similarity=0.071 Sum_probs=74.9
Q ss_pred eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-C--CcEEEEEeCC---CCceeeeeeeeccccceeEEE
Q psy14815 113 TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-D--KSVWVWEVGE---EDEYECAAVINAHIQDVKKVR 186 (479)
Q Consensus 113 ~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-d--g~i~vwd~~~---~~~~~~~~~~~~~~~~v~~l~ 186 (479)
.-.+||+.+++.+.+.. . ..-.+.+-.+.+||+++.+|+. + ..+++++... ...+......-.....-.+..
T Consensus 47 ~s~~yD~~tn~~rpl~v-~-td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~ 124 (243)
T PF07250_consen 47 HSVEYDPNTNTFRPLTV-Q-TDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTAT 124 (243)
T ss_pred EEEEEecCCCcEEeccC-C-CCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccce
Confidence 35689999987544322 1 2234445567889999999876 2 3588887654 111111110011222333455
Q ss_pred EecCCCEEEEEEcCCc-EEEEecCCcccceEeeeeec-----CCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCC
Q psy14815 187 FHPFDNILASASYDDT-VKLFKEDKAEADWINFATLK-----SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 257 (479)
Q Consensus 187 ~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 257 (479)
--|||+.|+.|+...- ..+|.-............+. ....---.+...|+|+.++.+..++ .|||....
T Consensus 125 ~L~DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s--~i~d~~~n 199 (243)
T PF07250_consen 125 TLPDGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGS--IIYDYKTN 199 (243)
T ss_pred ECCCCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCc--EEEeCCCC
Confidence 6679999999887643 44444322111111111111 0111122456679999998887655 45676444
|
Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium []. |
| >PLN02193 nitrile-specifier protein | Back alignment and domain information |
|---|
Probab=88.34 E-value=28 Score=34.42 Aligned_cols=148 Identities=9% Similarity=0.085 Sum_probs=68.8
Q ss_pred CCEEEEEECC-------CeEEEEECCCCeEEEeEEEeCCCC--cEEEEEEcCCCCEEEEEeCC-----CcEEEEEeCCCC
Q psy14815 102 GNFIASASFD-------ATTAVWDKRSGQFECNATLEGHEN--EVKSVTWSKNGQFLATCSRD-----KSVWVWEVGEED 167 (479)
Q Consensus 102 ~~~l~t~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~--~v~~l~~~~~~~~l~~~~~d-----g~i~vwd~~~~~ 167 (479)
+..++.|+.+ ..+.+||+.+.++........... ........-++.+.+.|+.+ ..+..||+.+.
T Consensus 176 ~~iyv~GG~~~~~~~~~~~v~~yD~~~~~W~~~~~~g~~P~~~~~~~~~v~~~~~lYvfGG~~~~~~~ndv~~yD~~t~- 254 (470)
T PLN02193 176 NKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLSCLGVRMVSIGSTLYVFGGRDASRQYNGFYSFDTTTN- 254 (470)
T ss_pred CEEEEECCcCCCCCCeeCcEEEEECCCCEEEeCCCCCCCCCCcccceEEEEECCEEEEECCCCCCCCCccEEEEECCCC-
Confidence 4455666642 347788998887653321100111 11111112245566666654 35788888764
Q ss_pred ceeeeeeeec--cccceeEEEEecCCCEEEEEEcCC-----cEEEEecCCcccceEeeeeec---CCCccEEEEEEccCC
Q psy14815 168 EYECAAVINA--HIQDVKKVRFHPFDNILASASYDD-----TVKLFKEDKAEADWINFATLK---SHTSTVWSLAFDRIG 237 (479)
Q Consensus 168 ~~~~~~~~~~--~~~~v~~l~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~ 237 (479)
.+..+..... ....-.++.. -++++.+.|+.++ .+..||+.+.. |..+.... ..........+ ++
T Consensus 255 ~W~~l~~~~~~P~~R~~h~~~~-~~~~iYv~GG~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~~~R~~~~~~~~--~g 329 (470)
T PLN02193 255 EWKLLTPVEEGPTPRSFHSMAA-DEENVYVFGGVSATARLKTLDSYNIVDKK--WFHCSTPGDSFSIRGGAGLEVV--QG 329 (470)
T ss_pred EEEEcCcCCCCCCCccceEEEE-ECCEEEEECCCCCCCCcceEEEEECCCCE--EEeCCCCCCCCCCCCCcEEEEE--CC
Confidence 3333322210 0111112222 2466777777543 36677776532 33222110 11111112222 46
Q ss_pred CEEEEeeCC----CeEEEEecc
Q psy14815 238 SRLATCSDD----ATVKIWKEY 255 (479)
Q Consensus 238 ~~l~s~~~d----g~i~iwd~~ 255 (479)
+.++.++.+ ..+.+||+.
T Consensus 330 kiyviGG~~g~~~~dv~~yD~~ 351 (470)
T PLN02193 330 KVWVVYGFNGCEVDDVHYYDPV 351 (470)
T ss_pred cEEEEECCCCCccCceEEEECC
Confidence 666666655 357788864
|
|
| >KOG1900|consensus | Back alignment and domain information |
|---|
Probab=88.01 E-value=9.9 Score=41.11 Aligned_cols=158 Identities=9% Similarity=0.134 Sum_probs=87.4
Q ss_pred EeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEE--------ecCCCEEEEEEcCCcEEEEecCCcccc-----eEee
Q psy14815 152 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF--------HPFDNILASASYDDTVKLFKEDKAEAD-----WINF 218 (479)
Q Consensus 152 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~--------~~~~~~l~~~~~dg~i~i~d~~~~~~~-----~~~~ 218 (479)
.+.|..+.+|+.+++..... +.+-...|..+.. .|.=++++.-..--.|.++-+...+.. +...
T Consensus 95 iTiDn~L~lWny~~~~e~~~---~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~ 171 (1311)
T KOG1900|consen 95 ITIDNNLFLWNYESDNELAE---YDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTS 171 (1311)
T ss_pred EEeCCeEEEEEcCCCCcccc---ccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccc
Confidence 34678999999998754433 3333344444432 232244444444556666654322210 1111
Q ss_pred eeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCC--------CCCCC-ceEEEEEEeccccccEEEE
Q psy14815 219 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPT--------PDNDS-VWKCVCTLSGHHGRTIYDI 289 (479)
Q Consensus 219 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~i~~l 289 (479)
.++......|.++....+|+.+++|- || .+|.+.-.....-+.. ..... -...+..+.+.+..+|..+
T Consensus 172 ~~i~~dg~~V~~I~~t~nGRIF~~G~-dg--~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi 248 (1311)
T KOG1900|consen 172 FKISVDGVSVNCITYTENGRIFFAGR-DG--NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQI 248 (1311)
T ss_pred eeeecCCceEEEEEeccCCcEEEeec-CC--CEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceee
Confidence 22233456788999888888777664 55 4554422111110000 00000 0000222333447799999
Q ss_pred EecCCCCeEEEEeCCCeEEEcccCCC
Q psy14815 290 SWCHLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 290 ~~~~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
+.......+.+-+..|+|.+|++...
T Consensus 249 ~ID~SR~IlY~lsek~~v~~Y~i~~~ 274 (1311)
T KOG1900|consen 249 TIDNSRNILYVLSEKGTVSAYDIGGN 274 (1311)
T ss_pred EeccccceeeeeccCceEEEEEccCC
Confidence 99998889999999999999999873
|
|
| >COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.75 E-value=15 Score=34.89 Aligned_cols=155 Identities=14% Similarity=0.047 Sum_probs=92.2
Q ss_pred ccccccceEEEEECCCCCeEEEeeCCCcEEEEeccccccc-ccccC----------------CCccceEEEeecCCcEEE
Q psy14815 7 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPY-EKLHG----------------LPVETSLRQLVEDKNIRL 69 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~i~~ 69 (479)
|..-...|..+-..|||+.|..-+. .++.++++.+.... .++.. ...+..+....+||.+.-
T Consensus 216 L~~~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQ 294 (733)
T COG4590 216 LSVPFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQ 294 (733)
T ss_pred cCCCccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceee
Confidence 4444567778889999998776553 57888887654321 11111 133556777888998888
Q ss_pred e-cCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCE
Q psy14815 70 W-GKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 148 (479)
Q Consensus 70 w-~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~ 148 (479)
| |....+...........-...++..+.-..+.+-+++-..+|++..+...+.+.. -++.-.....-+++||.+.+
T Consensus 295 WFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~l---L~~~~~~~~~~~~~Sp~~~~ 371 (733)
T COG4590 295 WFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLL---LFERAYQAPQLVAMSPNQAY 371 (733)
T ss_pred eeeeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcce---ehhhhhcCcceeeeCcccch
Confidence 7 4443222211111111112234443333334456777788888888875554322 22222335677899999988
Q ss_pred EEEEeCCCcEEEEEeCCC
Q psy14815 149 LATCSRDKSVWVWEVGEE 166 (479)
Q Consensus 149 l~~~~~dg~i~vwd~~~~ 166 (479)
+++- ..|.++++.+++.
T Consensus 372 Ll~e-~~gki~~~~l~Nr 388 (733)
T COG4590 372 LLSE-DQGKIRLAQLENR 388 (733)
T ss_pred heee-cCCceEEEEecCC
Confidence 8875 4578999998775
|
|
| >PF13449 Phytase-like: Esterase-like activity of phytase | Back alignment and domain information |
|---|
Probab=87.66 E-value=24 Score=32.88 Aligned_cols=166 Identities=10% Similarity=0.059 Sum_probs=94.2
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCe------EEEEECCC--C---eE--EEeEEEeCCCC--------cEEEEEEcCCCC
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDAT------TAVWDKRS--G---QF--ECNATLEGHEN--------EVKSVTWSKNGQ 147 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~------i~iwd~~~--~---~~--~~~~~~~~~~~--------~v~~l~~~~~~~ 147 (479)
.-+.++.+.+.+++..+++.+.+|. +...++.. + .. .....+....+ ...+|++.+++.
T Consensus 18 ~~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~ 97 (326)
T PF13449_consen 18 PFGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGS 97 (326)
T ss_pred ccCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCC
Confidence 3467888999876667777777777 65555543 1 11 11112222111 345788877887
Q ss_pred EEEEEeCC------CcEEEEEeCCCCceeee---eee---------eccccceeEEEEecCCCEEEEEEcCC-------c
Q psy14815 148 FLATCSRD------KSVWVWEVGEEDEYECA---AVI---------NAHIQDVKKVRFHPFDNILASASYDD-------T 202 (479)
Q Consensus 148 ~l~~~~~d------g~i~vwd~~~~~~~~~~---~~~---------~~~~~~v~~l~~~~~~~~l~~~~~dg-------~ 202 (479)
++++.-.+ ..|..++.. +.....+ ..+ ........+++++|+|+.|+++.+.. .
T Consensus 98 ~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~ 176 (326)
T PF13449_consen 98 FWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRA 176 (326)
T ss_pred EEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCccc
Confidence 77776666 678888866 3221111 111 12344578999999999777665322 1
Q ss_pred -------EEEEecCCcc---cceEeeeeecC-----CCccEEEEEEccCCCEEEEee-----CCCeEEEEecc
Q psy14815 203 -------VKLFKEDKAE---ADWINFATLKS-----HTSTVWSLAFDRIGSRLATCS-----DDATVKIWKEY 255 (479)
Q Consensus 203 -------i~i~d~~~~~---~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~s~~-----~dg~i~iwd~~ 255 (479)
++++...... ........+.. ....++.+.+-+++++|+.-- ....++|+.+.
T Consensus 177 ~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~~~~~~~~~~ri~~v~ 249 (326)
T PF13449_consen 177 NPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERDFSPGTGNYKRIYRVD 249 (326)
T ss_pred ccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEccCCCCccceEEEEEEE
Confidence 4555444221 11122333332 457788999999998766432 23456666544
|
|
| >TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family | Back alignment and domain information |
|---|
Probab=87.61 E-value=29 Score=33.82 Aligned_cols=56 Identities=11% Similarity=0.084 Sum_probs=37.0
Q ss_pred cceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeee-----cCCCccEEEEEEccCC
Q psy14815 180 QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL-----KSHTSTVWSLAFDRIG 237 (479)
Q Consensus 180 ~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~ 237 (479)
...+.|+|.|++++|++--..|.|++++...... ..+..+ .........|+++|+-
T Consensus 30 ~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~--~~~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 30 NKPWALLWGPDNQLWVTERATGKILRVNPETGEV--KVVFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred CCceEEEEcCCCeEEEEEecCCEEEEEeCCCCce--eeeecCCceeccCCCCceeeEEECCCc
Confidence 3467899999998776655469999998654332 111111 1135778999999874
|
PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis. |
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
Probab=87.54 E-value=25 Score=32.97 Aligned_cols=106 Identities=8% Similarity=0.117 Sum_probs=53.2
Q ss_pred CCEEEEEECC-------CeEEEEECCCCeEEEeEEEeCCCC----cEEEEEEcCCCCEEEEEeCC-----CcEEEEEeCC
Q psy14815 102 GNFIASASFD-------ATTAVWDKRSGQFECNATLEGHEN----EVKSVTWSKNGQFLATCSRD-----KSVWVWEVGE 165 (479)
Q Consensus 102 ~~~l~t~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~----~v~~l~~~~~~~~l~~~~~d-----g~i~vwd~~~ 165 (479)
+.+++.|+.+ ..+.+||+.+.++........... ....+.+ ++++++.|+.+ ..+.+||..+
T Consensus 33 ~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t 110 (341)
T PLN02153 33 DKLYSFGGELKPNEHIDKDLYVFDFNTHTWSIAPANGDVPRISCLGVRMVAV--GTKLYIFGGRDEKREFSDFYSYDTVK 110 (341)
T ss_pred CEEEEECCccCCCCceeCcEEEEECCCCEEEEcCccCCCCCCccCceEEEEE--CCEEEEECCCCCCCccCcEEEEECCC
Confidence 4555666542 358889998887654433211111 1222222 45666677653 2577888876
Q ss_pred CCceeeeeeeec----cccceeEEEEecCCCEEEEEEcC-----------CcEEEEecCCc
Q psy14815 166 EDEYECAAVINA----HIQDVKKVRFHPFDNILASASYD-----------DTVKLFKEDKA 211 (479)
Q Consensus 166 ~~~~~~~~~~~~----~~~~v~~l~~~~~~~~l~~~~~d-----------g~i~i~d~~~~ 211 (479)
. .+..+..+.. ....-.+++. -++++.+.|+.+ ..+.+||..+.
T Consensus 111 ~-~W~~~~~~~~~~~p~~R~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~ 169 (341)
T PLN02153 111 N-EWTFLTKLDEEGGPEARTFHSMAS-DENHVYVFGGVSKGGLMKTPERFRTIEAYNIADG 169 (341)
T ss_pred C-EEEEeccCCCCCCCCCceeeEEEE-ECCEEEEECCccCCCccCCCcccceEEEEECCCC
Confidence 4 2333222210 0111112222 246677777753 24677887754
|
|
| >PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []) | Back alignment and domain information |
|---|
Probab=87.35 E-value=7.9 Score=32.16 Aligned_cols=30 Identities=17% Similarity=0.279 Sum_probs=25.2
Q ss_pred ceeEEEEecCC------CEEEEEEcCCcEEEEecCC
Q psy14815 181 DVKKVRFHPFD------NILASASYDDTVKLFKEDK 210 (479)
Q Consensus 181 ~v~~l~~~~~~------~~l~~~~~dg~i~i~d~~~ 210 (479)
.+.+++|||.| .+|++-+.++.|.+|....
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 68899999955 4788889999999998764
|
The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 []. |
| >PF14727 PHTB1_N: PTHB1 N-terminus | Back alignment and domain information |
|---|
Probab=87.20 E-value=29 Score=33.40 Aligned_cols=150 Identities=11% Similarity=0.048 Sum_probs=90.5
Q ss_pred ccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECC-----CCCEEEEEECCCeEEEEECCC-------
Q psy14815 54 VETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP-----CGNFIASASFDATTAVWDKRS------- 121 (479)
Q Consensus 54 ~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-----~~~~l~t~~~dg~i~iwd~~~------- 121 (479)
....++.++..|.+++|+....+.... ...+...-..+|..+..-+ +...||. =.-..+.||.+..
T Consensus 36 ~~d~IivGS~~G~LrIy~P~~~~~~~~-~lllE~~l~~PILqv~~G~F~s~~~~~~LaV-LhP~kl~vY~v~~~~g~~~~ 113 (418)
T PF14727_consen 36 GSDKIIVGSYSGILRIYDPSGNEFQPE-DLLLETQLKDPILQVECGKFVSGSEDLQLAV-LHPRKLSVYSVSLVDGTVEH 113 (418)
T ss_pred CccEEEEeccccEEEEEccCCCCCCCc-cEEEEEecCCcEEEEEeccccCCCCcceEEE-ecCCEEEEEEEEecCCCccc
Confidence 456788889999999999864333322 2233345567888888653 2234444 4457888888732
Q ss_pred CeEEEeEEEeCCC--CcEEEEEEcC----C-CCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEE
Q psy14815 122 GQFECNATLEGHE--NEVKSVTWSK----N-GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 194 (479)
Q Consensus 122 ~~~~~~~~~~~~~--~~v~~l~~~~----~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l 194 (479)
+....+..+..|. .....++.-| . ..++++=+.||.+.+|+-+.. .....+.. ---...+.|.+..+.|
T Consensus 114 g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~---~f~~~lp~-~llPgPl~Y~~~tDsf 189 (418)
T PF14727_consen 114 GNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESF---AFSRFLPD-FLLPGPLCYCPRTDSF 189 (418)
T ss_pred CcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcE---EEEEEcCC-CCCCcCeEEeecCCEE
Confidence 1111222222232 2233333333 2 357889999999999997653 21222222 1122347888888899
Q ss_pred EEEEcCCcEEEEecC
Q psy14815 195 ASASYDDTVKLFKED 209 (479)
Q Consensus 195 ~~~~~dg~i~i~d~~ 209 (479)
++++.+..+.-|...
T Consensus 190 vt~sss~~l~~Yky~ 204 (418)
T PF14727_consen 190 VTASSSWTLECYKYQ 204 (418)
T ss_pred EEecCceeEEEecHH
Confidence 999998889888753
|
|
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=85.85 E-value=0.13 Score=48.54 Aligned_cols=147 Identities=14% Similarity=0.237 Sum_probs=97.1
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEE-EEeCCCcEEEEEeCCCC
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSVWVWEVGEED 167 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~i~vwd~~~~~ 167 (479)
+-.......|-+.+.-++.++.+..+..||-.... .... ...+....++|..++..++ .+-..+.+.+||+.+..
T Consensus 33 alv~pi~~~w~~e~~nlavaca~tiv~~YD~agq~---~le~-n~tg~aldm~wDkegdvlavlAek~~piylwd~n~ey 108 (615)
T KOG2247|consen 33 ALVGPIIHRWRPEGHNLAVACANTIVIYYDKAGQV---ILEL-NPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEY 108 (615)
T ss_pred hccccceeeEecCCCceehhhhhhHHHhhhhhcce---eccc-CCchhHhhhhhccccchhhhhhhcCCCeeechhhhhh
Confidence 33444556788877778888888899999865432 2222 2345667888888777544 44567899999998753
Q ss_pred ceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCC
Q psy14815 168 EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 247 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 247 (479)
..+ +. + +-...-.-+.|++....++.+...|.+.+++...... +.....|...++++++.+.+. .+.++.|.
T Consensus 109 tqq-LE-~-gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~----iiv~Gkh~RRgtq~av~lEd~-vil~dcd~ 180 (615)
T KOG2247|consen 109 TQQ-LE-S-GGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRR----IIVMGKHQRRGTQIAVTLEDY-VILCDCDN 180 (615)
T ss_pred HHH-Hh-c-cCcchHHHHhhccCCccccccccccceEEEeccchhh----hhhhcccccceeEEEecccce-eeecCcHH
Confidence 211 11 1 1111122377899888999999999999999886543 333344888999999998654 44455444
|
|
| >KOG1983|consensus | Back alignment and domain information |
|---|
Probab=85.83 E-value=20 Score=38.95 Aligned_cols=73 Identities=10% Similarity=0.017 Sum_probs=42.5
Q ss_pred eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEecc
Q psy14815 176 NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY 255 (479)
Q Consensus 176 ~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 255 (479)
..+..++.+..+....+ ++.+...+.+-.|+...... .+...+.....++++..++++..||.+..||..
T Consensus 195 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~v~~h~Dgs~~fWd~s 264 (993)
T KOG1983|consen 195 SLIEYESLQVLYYSPTK-ILIGFNRGLVVIKDRASKYV---------QSAYLPNGQLESRDGSHFVSYHTDGSYAFWDVS 264 (993)
T ss_pred cccccccceeeeecCCC-cceeeeeeeeeehhcccccc---------hhhcccccccCccCCceEEEEEecCCEEeeecC
Confidence 33445555555544333 33444556666666543221 111111112227889999999999999999987
Q ss_pred CCC
Q psy14815 256 KPG 258 (479)
Q Consensus 256 ~~~ 258 (479)
.+.
T Consensus 265 ~g~ 267 (993)
T KOG1983|consen 265 SGK 267 (993)
T ss_pred CCc
Confidence 753
|
|
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=85.81 E-value=3.3 Score=24.16 Aligned_cols=32 Identities=19% Similarity=0.449 Sum_probs=21.4
Q ss_pred ccccccceEEEEECCCCCeEEEee-CC--CcEEEE
Q psy14815 7 LKGHQGRVWNVSWNPQGTMISSCG-ED--KNIRLW 38 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~~~l~t~~-~d--g~v~iw 38 (479)
+.-....-....|||||+.|+-++ .+ |.-.||
T Consensus 4 ~t~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 4 LTNSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp ES-SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred cccCCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 334556778899999999887665 44 666666
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >COG4257 Vgb Streptogramin lyase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=85.76 E-value=25 Score=31.25 Aligned_cols=233 Identities=11% Similarity=0.092 Sum_probs=126.5
Q ss_pred eEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCC-------CCCceeeeEEec
Q psy14815 14 VWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKES-------FGNKFTAKAILS 86 (479)
Q Consensus 14 V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~-------~~~~~~~~~~~~ 86 (479)
-..++-+|||..-+++...|.|---|-.+|+....-.+.......+....|+..-+-|... .....+......
T Consensus 64 p~dvapapdG~VWft~qg~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~~~aI~R~dpkt~evt~f~lp~ 143 (353)
T COG4257 64 PFDVAPAPDGAVWFTAQGTGAIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWITDTGLAIGRLDPKTLEVTRFPLPL 143 (353)
T ss_pred ccccccCCCCceEEecCccccceecCCCCCceEEEecCCCCCCceEEECCCCCeeEecCcceeEEecCcccceEEeeccc
Confidence 4556777788777777766666666666666544333333333444444444433333221 011112222222
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC-CCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCC
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG-HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~ 165 (479)
+.-........|.+.|++-+++.. |.---.|..++ .+..+.. .....+.|+..|+|..-++.-.+..|-..|...
T Consensus 144 ~~a~~nlet~vfD~~G~lWFt~q~-G~yGrLdPa~~---~i~vfpaPqG~gpyGi~atpdGsvwyaslagnaiaridp~~ 219 (353)
T COG4257 144 EHADANLETAVFDPWGNLWFTGQI-GAYGRLDPARN---VISVFPAPQGGGPYGICATPDGSVWYASLAGNAIARIDPFA 219 (353)
T ss_pred ccCCCcccceeeCCCccEEEeecc-ccceecCcccC---ceeeeccCCCCCCcceEECCCCcEEEEeccccceEEccccc
Confidence 344567778889999988888753 21111122222 1122221 223456788899999877776777777777665
Q ss_pred CCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeC
Q psy14815 166 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 245 (479)
Q Consensus 166 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 245 (479)
... +.+..-......-+.+--+|.++.-++-...+.+.-||-.... |. -..+.+....-.++.....++.-++--.
T Consensus 220 ~~a-ev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~s--W~-eypLPgs~arpys~rVD~~grVW~sea~ 295 (353)
T COG4257 220 GHA-EVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTS--WI-EYPLPGSKARPYSMRVDRHGRVWLSEAD 295 (353)
T ss_pred CCc-ceecCCCcccccccccccCccCcEEEeccCCceeeEeCccccc--ce-eeeCCCCCCCcceeeeccCCcEEeeccc
Confidence 421 2222222222334556667788888887777888888876433 22 1233344444456666665655554444
Q ss_pred CCeEEEEec
Q psy14815 246 DATVKIWKE 254 (479)
Q Consensus 246 dg~i~iwd~ 254 (479)
.|.|.-+|-
T Consensus 296 agai~rfdp 304 (353)
T COG4257 296 AGAIGRFDP 304 (353)
T ss_pred cCceeecCc
Confidence 556666664
|
|
| >PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes | Back alignment and domain information |
|---|
Probab=85.53 E-value=20 Score=31.55 Aligned_cols=146 Identities=12% Similarity=0.082 Sum_probs=73.6
Q ss_pred EEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc-C--CcEEEEecCC--cccceEeeeeecCCCccEEEEE
Q psy14815 158 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-D--DTVKLFKEDK--AEADWINFATLKSHTSTVWSLA 232 (479)
Q Consensus 158 i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-d--g~i~i~d~~~--~~~~~~~~~~~~~~~~~v~~~~ 232 (479)
-.+||+.+.+- +.+.. .....+.+-.+.++|++|.+|+. + ..+++++... ....|......-.....--+..
T Consensus 48 s~~yD~~tn~~-rpl~v--~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~ 124 (243)
T PF07250_consen 48 SVEYDPNTNTF-RPLTV--QTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTAT 124 (243)
T ss_pred EEEEecCCCcE-EeccC--CCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccce
Confidence 35688887632 22211 12233444567889999999875 2 3588888654 1112222211112233444556
Q ss_pred EccCCCEEEEeeCCC-eEEEEeccCCCCCCCCCCCCCCCceEEEEEEe-ccccccEEEEEecCCCCeEEEEeCCCeEEEc
Q psy14815 233 FDRIGSRLATCSDDA-TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHGRTIYDISWCHLTDLIATACGDDAIRIF 310 (479)
Q Consensus 233 ~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw 310 (479)
.-+||+.|+.|+.+. +..+|.-...... ...+..+.... .....---.+...|+|++++.+..+. .||
T Consensus 125 ~L~DG~vlIvGG~~~~t~E~~P~~~~~~~--------~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s--~i~ 194 (243)
T PF07250_consen 125 TLPDGRVLIVGGSNNPTYEFWPPKGPGPG--------PVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGS--IIY 194 (243)
T ss_pred ECCCCCEEEEeCcCCCcccccCCccCCCC--------ceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCc--EEE
Confidence 678999998888763 2333322111000 00011111111 01011223466679999998887643 466
Q ss_pred ccCCCC
Q psy14815 311 KENPEA 316 (479)
Q Consensus 311 ~~~~~~ 316 (479)
|..+.+
T Consensus 195 d~~~n~ 200 (243)
T PF07250_consen 195 DYKTNT 200 (243)
T ss_pred eCCCCe
Confidence 777765
|
Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium []. |
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=85.35 E-value=0.28 Score=46.38 Aligned_cols=137 Identities=15% Similarity=0.152 Sum_probs=92.4
Q ss_pred eEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE-EeeCCCeEEEEeccCCCCCC
Q psy14815 183 KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA-TCSDDATVKIWKEYKPGNSA 261 (479)
Q Consensus 183 ~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~ 261 (479)
-...|-|.+.-++.++.+..+..||-.... +. -....+....++|+.++..++ .+-..+.+.+||+.+.....
T Consensus 38 i~~~w~~e~~nlavaca~tiv~~YD~agq~-----~l-e~n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqq 111 (615)
T KOG2247|consen 38 IIHRWRPEGHNLAVACANTIVIYYDKAGQV-----IL-ELNPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQ 111 (615)
T ss_pred ceeeEecCCCceehhhhhhHHHhhhhhcce-----ec-ccCCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHH
Confidence 345677877778889989899999865322 11 122345556788888877654 44567889999985432210
Q ss_pred CCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEE
Q psy14815 262 GIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV 341 (479)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 341 (479)
-.+.+.+... -+.|++....++.+...|.+.+++..+.. .......|...++++
T Consensus 112 --------------LE~gg~~s~s--ll~wsKg~~el~ig~~~gn~viynhgtsR----------~iiv~Gkh~RRgtq~ 165 (615)
T KOG2247|consen 112 --------------LESGGTSSKS--LLAWSKGTPELVIGNNAGNIVIYNHGTSR----------RIIVMGKHQRRGTQI 165 (615)
T ss_pred --------------HhccCcchHH--HHhhccCCccccccccccceEEEeccchh----------hhhhhcccccceeEE
Confidence 1111211222 27899999999999999999999988764 222333388999999
Q ss_pred EecCCCCCCC
Q psy14815 342 AWNPVVPEPQ 351 (479)
Q Consensus 342 ~~sp~~~~l~ 351 (479)
+|.+.+..+.
T Consensus 166 av~lEd~vil 175 (615)
T KOG2247|consen 166 AVTLEDYVIL 175 (615)
T ss_pred Eecccceeee
Confidence 9999887653
|
|
| >PF12768 Rax2: Cortical protein marker for cell polarity | Back alignment and domain information |
|---|
Probab=84.58 E-value=26 Score=31.69 Aligned_cols=115 Identities=13% Similarity=0.273 Sum_probs=65.6
Q ss_pred CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe------CCCcEEEEEeCCCCceeeeee-e-ecccccee
Q psy14815 112 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS------RDKSVWVWEVGEEDEYECAAV-I-NAHIQDVK 183 (479)
Q Consensus 112 g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~------~dg~i~vwd~~~~~~~~~~~~-~-~~~~~~v~ 183 (479)
..|++||..+.++... -.+-.+.|+++.|..+.+.++.|. ....+..||..+.. +..... . ..-.++++
T Consensus 16 ~~lC~yd~~~~qW~~~--g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~-w~~~~~~~s~~ipgpv~ 92 (281)
T PF12768_consen 16 PGLCLYDTDNSQWSSP--GNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQT-WSSLGGGSSNSIPGPVT 92 (281)
T ss_pred CEEEEEECCCCEeecC--CCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCe-eeecCCcccccCCCcEE
Confidence 4799999999876533 233567899999986666666664 34568889987752 222211 1 12346788
Q ss_pred EEEEec-CC-CEEEEEE-cCC--cEEEEecCCcccceEeeee-ecCCCccEEEEEE
Q psy14815 184 KVRFHP-FD-NILASAS-YDD--TVKLFKEDKAEADWINFAT-LKSHTSTVWSLAF 233 (479)
Q Consensus 184 ~l~~~~-~~-~~l~~~~-~dg--~i~i~d~~~~~~~~~~~~~-~~~~~~~v~~~~~ 233 (479)
.+.+.. ++ ++.+.|. .+| .|..||-. .|..+.. .......|..+.+
T Consensus 93 a~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs----~W~~i~~~~~~~~t~I~~l~~ 144 (281)
T PF12768_consen 93 ALTFISNDGSNFWVAGRSANGSTFLMKYDGS----SWSSIGSDILGSGTTIRGLQV 144 (281)
T ss_pred EEEeeccCCceEEEeceecCCCceEEEEcCC----ceEeccccccCCCCEEEEEEE
Confidence 887754 33 3444443 333 35566544 2333333 2222345555554
|
|
| >PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3 | Back alignment and domain information |
|---|
Probab=84.41 E-value=37 Score=32.10 Aligned_cols=156 Identities=14% Similarity=0.207 Sum_probs=87.7
Q ss_pred CCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEe----cCCCE--EEEEE-cC---CcEEEEecCCcccc
Q psy14815 145 NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH----PFDNI--LASAS-YD---DTVKLFKEDKAEAD 214 (479)
Q Consensus 145 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~----~~~~~--l~~~~-~d---g~i~i~d~~~~~~~ 214 (479)
...+++....++-+.+||+.... ++.+. .+.++.+..- -.++. |+.++ .+ ..|++|.+......
T Consensus 67 ~kSlIigTdK~~GL~VYdL~Gk~----lq~~~--~Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~ 140 (381)
T PF02333_consen 67 AKSLIIGTDKKGGLYVYDLDGKE----LQSLP--VGRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGE 140 (381)
T ss_dssp GG-EEEEEETTTEEEEEETTS-E----EEEE---SS-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTE
T ss_pred ccceEEEEeCCCCEEEEcCCCcE----EEeec--CCCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCc
Confidence 44577888888899999998752 22232 1223333221 13432 34444 32 46999988643221
Q ss_pred eEeeee----ecCCCccEEEEEE--cc-CCC-EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccE
Q psy14815 215 WINFAT----LKSHTSTVWSLAF--DR-IGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTI 286 (479)
Q Consensus 215 ~~~~~~----~~~~~~~v~~~~~--~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 286 (479)
...+.. +..-...++.+|+ ++ +|+ +.+....+|.+..|.+.....- ....+.++.|.. ...+
T Consensus 141 L~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g--------~v~~~lVR~f~~--~sQ~ 210 (381)
T PF02333_consen 141 LTDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDG--------KVSATLVREFKV--GSQP 210 (381)
T ss_dssp EEE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTS--------SEEEEEEEEEE---SS-E
T ss_pred ceEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCC--------cEeeEEEEEecC--CCcc
Confidence 111111 1112234667776 33 344 5567788999999988543221 134567888876 4578
Q ss_pred EEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 287 YDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 287 ~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
..|.......+|..+-++.-|.-|+.+...
T Consensus 211 EGCVVDDe~g~LYvgEE~~GIW~y~Aep~~ 240 (381)
T PF02333_consen 211 EGCVVDDETGRLYVGEEDVGIWRYDAEPEG 240 (381)
T ss_dssp EEEEEETTTTEEEEEETTTEEEEEESSCCC
T ss_pred eEEEEecccCCEEEecCccEEEEEecCCCC
Confidence 899998888899999888887777776543
|
1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A. |
| >PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins | Back alignment and domain information |
|---|
Probab=84.36 E-value=42 Score=32.61 Aligned_cols=31 Identities=19% Similarity=0.330 Sum_probs=25.1
Q ss_pred ccEEEEEEccCCCEEEEeeCCCeEEEEeccC
Q psy14815 226 STVWSLAFDRIGSRLATCSDDATVKIWKEYK 256 (479)
Q Consensus 226 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 256 (479)
..|.+++..+..+.+++.+.+|.|.+|++..
T Consensus 190 ~~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~ 220 (422)
T PF08801_consen 190 PKIVQVAVDPSRRLLYTLTSDGSIQVWDLGP 220 (422)
T ss_dssp --EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred hceeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence 3489999998889999999999999999954
|
RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A. |
| >COG5290 IkappaB kinase complex, IKAP component [Transcription] | Back alignment and domain information |
|---|
Probab=84.24 E-value=20 Score=36.78 Aligned_cols=175 Identities=17% Similarity=0.315 Sum_probs=90.2
Q ss_pred cccceEEEEECCCCCeEEEeeCCCcEEEEeccc----------------cccc--------ccccCC--------C----
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVI----------------REPY--------EKLHGL--------P---- 53 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~----------------~~~~--------~~~~~~--------~---- 53 (479)
-+++|-+.+||.|.+.++....+..|-+++-.- ++.+ ..+.+. |
T Consensus 111 v~nGIvaa~wS~DE~~~cvvt~~r~il~~~k~fd~ise~~L~~~dl~ef~khi~VgWgkketqfrgk~~raqlrdptmp~ 190 (1243)
T COG5290 111 VSNGIVAASWSADEKTWCVVTSTREILLFDKYFDPISEYHLKKSDLVEFGKHIRVGWGKKETQFRGKGARAQLRDPTMPY 190 (1243)
T ss_pred ccCceEEEeeccCCceEEEEEcCceEEEEeccccccchhhcchhHHHHhccceEeeecccchhccccchhhhccCCCCcc
Confidence 357889999999999777766677888875310 0000 111111 1
Q ss_pred --ccceEEEeecCCcEEEecCCCCCCc------ee--eeEE-----eccccCCcE----EEEEECCCCCEEEEEECCC--
Q psy14815 54 --VETSLRQLVEDKNIRLWGKESFGNK------FT--AKAI-----LSDGHQRTI----RETAWSPCGNFIASASFDA-- 112 (479)
Q Consensus 54 --~~~~~~~~~~~~~i~~w~~~~~~~~------~~--~~~~-----~~~~~~~~v----~~v~~~~~~~~l~t~~~dg-- 112 (479)
+...+.......++..|.-+..... .. .... ....-..++ ..+.|-|+|..++|-+.||
T Consensus 191 ~vD~G~l~avd~~k~~i~wrgD~~y~~v~r~Ee~prra~rvysreg~lds~sep~~g~e~~LSWkpqgS~~ati~td~~~ 270 (1243)
T COG5290 191 MVDYGDLFAVDTNKKIIFWRGDTEYNLVGRSEERPRRAFRVYSREGQLDSASEPVTGMEHQLSWKPQGSKYATIGTDGCS 270 (1243)
T ss_pred cccccceeEeeCCceEEEEccCcceeeecchhcccccceeeeccccccccccCCcccchhccccccCCceeeeeccCCCC
Confidence 1223455556666777832210100 00 0000 111222333 3488999999999987654
Q ss_pred ---eEEEEECCC---CeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEE
Q psy14815 113 ---TTAVWDKRS---GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVR 186 (479)
Q Consensus 113 ---~i~iwd~~~---~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~ 186 (479)
.|.++.-+. |.+. .. .+-...+..++|+-....++++ ....+++|-..+- .........-..+.-+.
T Consensus 271 ~S~~ViFfErNGLrHGef~--lr-~~~dEk~~~~~wn~~s~vlav~-~~n~~~lwttkNy---hWYLK~e~~ip~~s~vk 343 (1243)
T COG5290 271 TSESVIFFERNGLRHGEFD--LR-VGCDEKAFLENWNLLSTVLAVA-EGNLLKLWTTKNY---HWYLKVERQIPGISYVK 343 (1243)
T ss_pred CcceEEEEccCCcccCCcc--cc-CCchhhhhhhhhhHHHHHHHHh-hcceEEEEEccce---EEEEEEeecCCCcceee
Confidence 455554322 2210 01 1123356677777655544444 4467899987653 11111122233466788
Q ss_pred EecCC
Q psy14815 187 FHPFD 191 (479)
Q Consensus 187 ~~~~~ 191 (479)
|+|..
T Consensus 344 whpe~ 348 (1243)
T COG5290 344 WHPEE 348 (1243)
T ss_pred ecccc
Confidence 88843
|
|
| >PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I [] | Back alignment and domain information |
|---|
Probab=83.73 E-value=64 Score=34.25 Aligned_cols=119 Identities=13% Similarity=0.139 Sum_probs=74.7
Q ss_pred CCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeE---EEeEEEeCCCC----------cEEEEEEcCCCCEEEEEeCC
Q psy14815 90 QRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQF---ECNATLEGHEN----------EVKSVTWSKNGQFLATCSRD 155 (479)
Q Consensus 90 ~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~---~~~~~~~~~~~----------~v~~l~~~~~~~~l~~~~~d 155 (479)
..+...++|+| +...||.....|...||++..+.. ........+.+ .-..+.|.++.+.|++++.
T Consensus 145 g~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r- 223 (765)
T PF10214_consen 145 GFPHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNR- 223 (765)
T ss_pred CCccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcC-
Confidence 45788999999 567999999999999999921110 01111111112 2247889888888888865
Q ss_pred CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCC-CEEEEEEcCCcEEEEecCCc
Q psy14815 156 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKA 211 (479)
Q Consensus 156 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~i~d~~~~ 211 (479)
..+.++|+++......+ ........|..+.-+|.. .+++.- ....|...++...
T Consensus 224 ~~l~~~d~~~~~~~~~l-~~~~~~~~IlDv~~~~~~~~~~FiL-Ts~eiiw~~~~~~ 278 (765)
T PF10214_consen 224 SKLMLIDFESNWQTEYL-VTAKTWSWILDVKRSPDNPSHVFIL-TSKEIIWLDVKSS 278 (765)
T ss_pred CceEEEECCCCCccchh-ccCCChhheeeEEecCCccceEEEE-ecCeEEEEEccCC
Confidence 57888999987543321 222344568888888762 222222 2357888887764
|
These proteins are found in fungi. |
| >TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein | Back alignment and domain information |
|---|
Probab=83.58 E-value=38 Score=31.47 Aligned_cols=107 Identities=7% Similarity=0.027 Sum_probs=52.9
Q ss_pred CCCEEEEEECC-----CeEEEEECCCCeEE----EeEEEeCCCCcEEEEEEcCCCCEEEEEeC-----CCcEEEEEeCCC
Q psy14815 101 CGNFIASASFD-----ATTAVWDKRSGQFE----CNATLEGHENEVKSVTWSKNGQFLATCSR-----DKSVWVWEVGEE 166 (479)
Q Consensus 101 ~~~~l~t~~~d-----g~i~iwd~~~~~~~----~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-----dg~i~vwd~~~~ 166 (479)
++.+++.|+.+ ..+..+|+.+.++. ....+....... +++.. +++..+.|+. ...+..||+.+.
T Consensus 72 ~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~-~~~~~-~~~iYv~GG~~~~~~~~~v~~yd~~~~ 149 (323)
T TIGR03548 72 ENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENG-SACYK-DGTLYVGGGNRNGKPSNKSYLFNLETQ 149 (323)
T ss_pred CCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCc-eEEEE-CCEEEEEeCcCCCccCceEEEEcCCCC
Confidence 45566666654 35777788776541 111111111111 22222 4566666664 235788888764
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEEcCCc----EEEEecCCc
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT----VKLFKEDKA 211 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~----i~i~d~~~~ 211 (479)
.+..+..+.... .....+..-++++.+.|+.++. +..||..+.
T Consensus 150 -~W~~~~~~p~~~-r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~ 196 (323)
T TIGR03548 150 -EWFELPDFPGEP-RVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKN 196 (323)
T ss_pred -CeeECCCCCCCC-CCcceEEEECCEEEEEcCCCCccccceEEEecCCC
Confidence 333332222111 1112222335778888876543 567887754
|
Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat. |
| >TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118 | Back alignment and domain information |
|---|
Probab=81.73 E-value=41 Score=30.56 Aligned_cols=214 Identities=13% Similarity=0.148 Sum_probs=107.8
Q ss_pred eEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcE
Q psy14815 14 VWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 93 (479)
Q Consensus 14 V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v 93 (479)
-+.|+++|.+.+-++....+...+||......... + ....++...- . -.......
T Consensus 25 ~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~----~-~~L~vtiP~~-----------~---------~~~~~~~P 79 (336)
T TIGR03118 25 AWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLV----Q-DPLVVVIPAP-----------P---------PLAAEGTP 79 (336)
T ss_pred cceeEecCCCCEEEecCCcceEEeecCCcccccCC----c-cceEEEecCC-----------C---------CCCCCCCc
Confidence 46799999998888888888999999752110000 0 0000000000 0 00012234
Q ss_pred EEEEECCCC------------CEEEEEECCCeEEEEECCCCeE---EEeEEEeC-CCCcE-EEEEEcC--CCCEEEEEe-
Q psy14815 94 RETAWSPCG------------NFIASASFDATTAVWDKRSGQF---ECNATLEG-HENEV-KSVTWSK--NGQFLATCS- 153 (479)
Q Consensus 94 ~~v~~~~~~------------~~l~t~~~dg~i~iwd~~~~~~---~~~~~~~~-~~~~v-~~l~~~~--~~~~l~~~~- 153 (479)
+.+.|+... ..++.+++||+|.-|...-+.. .....+.. ....| ..+++-. .+.+|+.+.
T Consensus 80 TGiVfN~~~~F~vt~~g~~~~a~Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF 159 (336)
T TIGR03118 80 TGQVFNGSDTFVVSGEGITGPSRFLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANF 159 (336)
T ss_pred cEEEEeCCCceEEcCCCcccceeEEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEecc
Confidence 444444321 2468889999999998643321 11122221 12333 3444443 345555553
Q ss_pred CCCcEEEEEeCCCCceeeeeeeecc-----cc-----------ceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEe
Q psy14815 154 RDKSVWVWEVGEEDEYECAAVINAH-----IQ-----------DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 217 (479)
Q Consensus 154 ~dg~i~vwd~~~~~~~~~~~~~~~~-----~~-----------~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 217 (479)
..++|.+||-.-.+. ..-..+... -. -|+...-.++.+.=+.|..-|.|-+||....-
T Consensus 160 ~~g~IDVFd~~f~~~-~~~g~F~DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~G~l----- 233 (336)
T TIGR03118 160 RQGRIDVFKGSFRPP-PLPGSFIDPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLNGQL----- 233 (336)
T ss_pred CCCceEEecCccccc-cCCCCccCCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCCCcE-----
Confidence 478899998543210 000001000 00 01111112222233334445789999987432
Q ss_pred eeee--cCCCccEEEEEEcc------CCCEEEEeeCCCeEEEEeccCCC
Q psy14815 218 FATL--KSHTSTVWSLAFDR------IGSRLATCSDDATVKIWKEYKPG 258 (479)
Q Consensus 218 ~~~~--~~~~~~v~~~~~~~------~~~~l~s~~~dg~i~iwd~~~~~ 258 (479)
++.+ .+.-..-+.|+..| .+..|+---.||+|..||.....
T Consensus 234 ~~r~as~g~LNaPWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~sG~ 282 (336)
T TIGR03118 234 LRRVASSGRLNAPWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQSGA 282 (336)
T ss_pred EEEeccCCcccCCceeeeChhhhCCCCCCeEEeecCCceeEEecCCCCc
Confidence 2222 23334556777655 45677766689999999975543
|
This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus. |
| >TIGR03547 muta_rot_YjhT mutatrotase, YjhT family | Back alignment and domain information |
|---|
Probab=80.87 E-value=50 Score=31.00 Aligned_cols=88 Identities=9% Similarity=-0.027 Sum_probs=42.5
Q ss_pred CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC------cEEEEEeCCC-Cceeeeeeeecc-----c
Q psy14815 112 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK------SVWVWEVGEE-DEYECAAVINAH-----I 179 (479)
Q Consensus 112 g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg------~i~vwd~~~~-~~~~~~~~~~~~-----~ 179 (479)
..+.+||..++++..+..+......-.++.. -++++.+.|+.+. .+..+++... ..+..+..+... .
T Consensus 168 ~~v~~YDp~t~~W~~~~~~p~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~y~~~~~~~~W~~~~~m~~~r~~~~~ 246 (346)
T TIGR03547 168 KNVLSYDPSTNQWRNLGENPFLGTAGSAIVH-KGNKLLLINGEIKPGLRTAEVKQYLFTGGKLEWNKLPPLPPPKSSSQE 246 (346)
T ss_pred ceEEEEECCCCceeECccCCCCcCCCceEEE-ECCEEEEEeeeeCCCccchheEEEEecCCCceeeecCCCCCCCCCccc
Confidence 4688999999887765544321111122222 3567777776532 2455665332 233333332111 1
Q ss_pred cceeEEEEecCCCEEEEEEcC
Q psy14815 180 QDVKKVRFHPFDNILASASYD 200 (479)
Q Consensus 180 ~~v~~l~~~~~~~~l~~~~~d 200 (479)
......+...++++.+.|+.+
T Consensus 247 ~~~~~~a~~~~~~Iyv~GG~~ 267 (346)
T TIGR03547 247 GLAGAFAGISNGVLLVAGGAN 267 (346)
T ss_pred cccEEeeeEECCEEEEeecCC
Confidence 101111222357777887753
|
Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein. |
| >PF12768 Rax2: Cortical protein marker for cell polarity | Back alignment and domain information |
|---|
Probab=80.69 E-value=44 Score=30.27 Aligned_cols=62 Identities=11% Similarity=0.245 Sum_probs=40.6
Q ss_pred cCCcEEEEEECCCCCEEEEEE------CCCeEEEEECCCCeEEEeEE-E-eCCCCcEEEEEEcC-CCCEEE
Q psy14815 89 HQRTIRETAWSPCGNFIASAS------FDATTAVWDKRSGQFECNAT-L-EGHENEVKSVTWSK-NGQFLA 150 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~------~dg~i~iwd~~~~~~~~~~~-~-~~~~~~v~~l~~~~-~~~~l~ 150 (479)
-.+.|+++.|..+.++++.|. ....+..||+.+..+..... . ..-.++|..+.+.. |+..+.
T Consensus 35 i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s~~ipgpv~a~~~~~~d~~~~~ 105 (281)
T PF12768_consen 35 ISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSSNSIPGPVTALTFISNDGSNFW 105 (281)
T ss_pred ceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeeecCCcccccCCCcEEEEEeeccCCceEE
Confidence 467899999987777777764 34578899998886543322 1 12346788887754 443343
|
|
| >PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins | Back alignment and domain information |
|---|
Probab=80.59 E-value=58 Score=31.62 Aligned_cols=31 Identities=26% Similarity=0.486 Sum_probs=25.2
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEEeCC
Q psy14815 135 NEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 135 ~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~ 165 (479)
..|.++...+..+.+++.+.+|.|.+|++..
T Consensus 190 ~~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~ 220 (422)
T PF08801_consen 190 PKIVQVAVDPSRRLLYTLTSDGSIQVWDLGP 220 (422)
T ss_dssp --EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred hceeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence 3488999988889999999999999999985
|
RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A. |
| >KOG1983|consensus | Back alignment and domain information |
|---|
Probab=80.35 E-value=27 Score=38.04 Aligned_cols=35 Identities=14% Similarity=0.292 Sum_probs=29.0
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCC
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 121 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~ 121 (479)
.+.......++|+|...+++.++..|.|+++-...
T Consensus 32 ~G~~~~~~~~afD~~q~llai~t~tg~i~~yg~~~ 66 (993)
T KOG1983|consen 32 HGFPSTPSALAFDPTQGLLAIGTRTGAIKIYGQPG 66 (993)
T ss_pred cCCCCCCcceeeccccceEEEEEecccEEEecccc
Confidence 34455777889999999999999999999997554
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 479 | ||||
| 3fm0_A | 345 | Crystal Structure Of Wd40 Protein Ciao1 Length = 34 | 1e-108 | ||
| 3fm0_A | 345 | Crystal Structure Of Wd40 Protein Ciao1 Length = 34 | 2e-05 | ||
| 2hes_X | 330 | Cytosolic Iron-sulphur Assembly Protein- 1 Length = | 2e-45 | ||
| 2ymu_A | 577 | Structure Of A Highly Repetitive Propeller Structur | 2e-29 | ||
| 2ymu_A | 577 | Structure Of A Highly Repetitive Propeller Structur | 4e-23 | ||
| 1vyh_C | 410 | Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | 5e-18 | ||
| 1vyh_C | 410 | Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | 7e-18 | ||
| 1vyh_C | 410 | Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | 6e-10 | ||
| 3emh_A | 318 | Structural Basis Of Wdr5-Mll Interaction Length = 3 | 2e-17 | ||
| 2gx8_A | 397 | The Crystal Stucture Of Bacillus Cereus Protein Rel | 2e-17 | ||
| 2g99_A | 308 | Structural Basis For The Specific Recognition Of Me | 2e-17 | ||
| 2g9a_A | 311 | Structural Basis For The Specific Recognition Of Me | 2e-17 | ||
| 2h9m_A | 313 | Wdr5 In Complex With Unmodified H3k4 Peptide Length | 2e-17 | ||
| 4a7j_A | 318 | Symmetric Dimethylation Of H3 Arginine 2 Is A Novel | 2e-17 | ||
| 3psl_A | 318 | Fine-Tuning The Stimulation Of Mll1 Methyltransfera | 3e-17 | ||
| 2h68_A | 312 | Histone H3 Recognition And Presentation By The Wdr5 | 3e-17 | ||
| 3smr_A | 312 | Crystal Structure Of Human Wd Repeat Domain 5 With | 3e-17 | ||
| 2h13_A | 317 | Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length | 3e-17 | ||
| 2xl2_A | 334 | Wdr5 In Complex With An Rbbp5 Peptide Recruited To | 3e-17 | ||
| 2h9l_A | 329 | Wdr5delta23 Length = 329 | 3e-17 | ||
| 2gnq_A | 336 | Structure Of Wdr5 Length = 336 | 3e-17 | ||
| 3n0e_A | 315 | Crystal Structure Of Wdr5 Mutant (W330y) Length = 3 | 4e-17 | ||
| 3n0d_A | 315 | Crystal Structure Of Wdr5 Mutant (W330f) Length = 3 | 4e-17 | ||
| 2cnx_A | 315 | Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2. | 6e-17 | ||
| 2cnx_A | 315 | Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2. | 7e-04 | ||
| 2co0_A | 315 | Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs | 6e-17 | ||
| 2co0_A | 315 | Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs | 8e-04 | ||
| 3mxx_A | 315 | Crystal Structure Of Wdr5 Mutant (S62a) Length = 31 | 7e-17 | ||
| 3bg0_A | 316 | Architecture Of A Coat For The Nuclear Pore Membran | 3e-13 | ||
| 3bg0_A | 316 | Architecture Of A Coat For The Nuclear Pore Membran | 2e-04 | ||
| 1erj_A | 393 | Crystal Structure Of The C-Terminal Wd40 Domain Of | 4e-13 | ||
| 1erj_A | 393 | Crystal Structure Of The C-Terminal Wd40 Domain Of | 2e-10 | ||
| 3mks_B | 464 | Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH | 5e-13 | ||
| 1nex_B | 464 | Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp | 7e-13 | ||
| 2ovp_B | 445 | Structure Of The Skp1-Fbw7 Complex Length = 445 | 1e-12 | ||
| 2ovp_B | 445 | Structure Of The Skp1-Fbw7 Complex Length = 445 | 8e-11 | ||
| 2fyw_A | 267 | Crystal Structure Of A Conserved Protein Of Unknown | 2e-12 | ||
| 3ow8_A | 321 | Crystal Structure Of The Wd Repeat-Containing Prote | 8e-12 | ||
| 3ow8_A | 321 | Crystal Structure Of The Wd Repeat-Containing Prote | 4e-06 | ||
| 3zey_7 | 318 | High-resolution Cryo-electron Microscopy Structure | 8e-12 | ||
| 2bcj_B | 340 | Crystal Structure Of G Protein-coupled Receptor Kin | 2e-11 | ||
| 3sn6_B | 351 | Crystal Structure Of The Beta2 Adrenergic Receptor- | 2e-11 | ||
| 1gg2_B | 340 | G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet | 2e-11 | ||
| 1a0r_B | 340 | Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA- | 2e-11 | ||
| 1got_B | 340 | Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer | 2e-11 | ||
| 3dm0_A | 694 | Maltose Binding Protein Fusion With Rack1 From A. T | 6e-11 | ||
| 3dm0_A | 694 | Maltose Binding Protein Fusion With Rack1 From A. T | 8e-04 | ||
| 3sfz_A | 1249 | Crystal Structure Of Full-Length Murine Apaf-1 Leng | 3e-10 | ||
| 3sfz_A | 1249 | Crystal Structure Of Full-Length Murine Apaf-1 Leng | 2e-05 | ||
| 3shf_A | 1256 | Crystal Structure Of The R265s Mutant Of Full-Lengt | 4e-10 | ||
| 3shf_A | 1256 | Crystal Structure Of The R265s Mutant Of Full-Lengt | 2e-05 | ||
| 2nyd_A | 370 | Crystal Structure Of Staphylococcus Aureus Hypothet | 5e-10 | ||
| 3lnl_A | 370 | Crystal Structure Of Staphylococcus Aureus Protein | 5e-10 | ||
| 3izb_a | 319 | Localization Of The Small Subunit Ribosomal Protein | 1e-09 | ||
| 3rfg_A | 319 | Crystal Structure Of The Yeast Rack1 Dimer In Space | 1e-09 | ||
| 3rfh_A | 319 | Crystal Structure Of The Yeast Rack1 Dimer In Space | 1e-09 | ||
| 1trj_A | 314 | Homology Model Of Yeast Rack1 Protein Fitted Into 1 | 1e-09 | ||
| 3jyv_R | 313 | Structure Of The 40s Rrna And Proteins And PE TRNA | 2e-09 | ||
| 2pbi_B | 354 | The Multifunctional Nature Of Gbeta5RGS9 REVEALED F | 2e-09 | ||
| 3frx_A | 319 | Crystal Structure Of The Yeast Orthologue Of Rack1, | 3e-09 | ||
| 3iza_B | 1263 | Structure Of An Apoptosome-Procaspase-9 Card Comple | 3e-09 | ||
| 3iza_B | 1263 | Structure Of An Apoptosome-Procaspase-9 Card Comple | 3e-05 | ||
| 2xyi_A | 430 | Crystal Structure Of Nurf55 In Complex With A H4 Pe | 7e-09 | ||
| 2xyi_A | 430 | Crystal Structure Of Nurf55 In Complex With A H4 Pe | 4e-08 | ||
| 3c99_A | 432 | Structural Basis Of Histone H4 Recognition By P55 L | 7e-09 | ||
| 3c99_A | 432 | Structural Basis Of Histone H4 Recognition By P55 L | 4e-08 | ||
| 2yba_A | 422 | Crystal Structure Of Nurf55 In Complex With Histone | 9e-09 | ||
| 2yba_A | 422 | Crystal Structure Of Nurf55 In Complex With Histone | 4e-08 | ||
| 2zkq_a | 317 | Structure Of A Mammalian Ribosomal 40s Subunit With | 1e-08 | ||
| 3gfc_A | 425 | Crystal Structure Of Histone-Binding Protein Rbbp4 | 1e-08 | ||
| 3gfc_A | 425 | Crystal Structure Of Histone-Binding Protein Rbbp4 | 2e-07 | ||
| 2pm6_B | 297 | Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF | 1e-08 | ||
| 2pm6_B | 297 | Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF | 6e-05 | ||
| 4aow_A | 340 | Crystal Structure Of The Human Rack1 Protein At A R | 1e-08 | ||
| 2pm9_B | 297 | Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT O | 2e-08 | ||
| 2pm9_B | 297 | Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT O | 8e-05 | ||
| 3f3f_A | 351 | Crystal Structure Of The Nucleoporin Pair Nup85-Seh | 2e-08 | ||
| 3f3f_A | 351 | Crystal Structure Of The Nucleoporin Pair Nup85-Seh | 3e-05 | ||
| 1p22_A | 435 | Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex | 2e-08 | ||
| 3ewe_A | 349 | Crystal Structure Of The Nup85SEH1 COMPLEX Length = | 2e-08 | ||
| 3ewe_A | 349 | Crystal Structure Of The Nup85SEH1 COMPLEX Length = | 3e-05 | ||
| 3jrp_A | 379 | Sec13 With Nup145c (Aa109-179) Insertion Blade Leng | 2e-08 | ||
| 3jrp_A | 379 | Sec13 With Nup145c (Aa109-179) Insertion Blade Leng | 7e-05 | ||
| 3f3p_A | 351 | Crystal Structure Of The Nucleoporin Pair Nup85-Seh | 3e-08 | ||
| 3f3p_A | 351 | Crystal Structure Of The Nucleoporin Pair Nup85-Seh | 3e-05 | ||
| 3iz6_a | 380 | Localization Of The Small Subunit Ribosomal Protein | 4e-08 | ||
| 3cfs_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 4e-08 | ||
| 3cfs_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 2e-07 | ||
| 3cfs_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 7e-04 | ||
| 3cfv_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 5e-08 | ||
| 3cfv_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 3e-07 | ||
| 4ggd_A | 431 | Structural Analysis Of Human Cdc20 Supports Multisi | 6e-08 | ||
| 4gga_A | 420 | Structural Analysis Of Human Cdc20 Supports Multi-S | 6e-08 | ||
| 3jro_A | 753 | Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice | 1e-07 | ||
| 3jro_A | 753 | Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice | 6e-05 | ||
| 4ggc_A | 318 | Structural Analysis Of Human Cdc20 Supports Multi-S | 1e-07 | ||
| 2pm7_B | 297 | Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF | 2e-07 | ||
| 2xzm_R | 343 | Crystal Structure Of The Eukaryotic 40s Ribosomal S | 2e-07 | ||
| 2xzm_R | 343 | Crystal Structure Of The Eukaryotic 40s Ribosomal S | 4e-07 | ||
| 2yno_A | 310 | Yeast Betaprime Cop 1-304h6 Length = 310 | 2e-07 | ||
| 2ynn_A | 304 | Yeast Betaprime Cop 1-304 With Ktktn Motif Length = | 2e-07 | ||
| 2aq5_A | 402 | Crystal Structure Of Murine Coronin-1 Length = 402 | 8e-07 | ||
| 2aq5_A | 402 | Crystal Structure Of Murine Coronin-1 Length = 402 | 2e-05 | ||
| 2ynp_A | 604 | Yeast Betaprime Cop 1-604 With Ktktn Motif Length = | 1e-06 | ||
| 1nr0_A | 611 | Two Seven-Bladed Beta-Propeller Domains Revealed By | 2e-06 | ||
| 2b4e_A | 402 | Crystal Structure Of Murine Coronin-1: Monoclinic F | 3e-06 | ||
| 2b4e_A | 402 | Crystal Structure Of Murine Coronin-1: Monoclinic F | 6e-05 | ||
| 4a11_B | 408 | Structure Of The Hsddb1-Hscsa Complex Length = 408 | 3e-06 | ||
| 3mkq_A | 814 | Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco | 4e-06 | ||
| 3zwl_B | 369 | Structure Of Eukaryotic Translation Initiation Fact | 5e-05 | ||
| 4aez_A | 401 | Crystal Structure Of Mitotic Checkpoint Complex Len | 7e-04 |
| >pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345 | Back alignment and structure |
|
| >pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345 | Back alignment and structure |
|
| >pdb|2HES|X Chain X, Cytosolic Iron-sulphur Assembly Protein- 1 Length = 330 | Back alignment and structure |
|
| >pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577 | Back alignment and structure |
|
| >pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577 | Back alignment and structure |
|
| >pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | Back alignment and structure |
|
| >pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | Back alignment and structure |
|
| >pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | Back alignment and structure |
|
| >pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318 | Back alignment and structure |
|
| >pdb|2GX8|A Chain A, The Crystal Stucture Of Bacillus Cereus Protein Related To Nif3 Length = 397 | Back alignment and structure |
|
| >pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308 | Back alignment and structure |
|
| >pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311 | Back alignment and structure |
|
| >pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313 | Back alignment and structure |
|
| >pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318 | Back alignment and structure |
|
| >pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318 | Back alignment and structure |
|
| >pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312 | Back alignment and structure |
|
| >pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312 | Back alignment and structure |
|
| >pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317 | Back alignment and structure |
|
| >pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334 | Back alignment and structure |
|
| >pdb|2H9L|A Chain A, Wdr5delta23 Length = 329 | Back alignment and structure |
|
| >pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336 | Back alignment and structure |
|
| >pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315 | Back alignment and structure |
|
| >pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315 | Back alignment and structure |
|
| >pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315 | Back alignment and structure |
|
| >pdb|3BG0|A Chain A, Architecture Of A Coat For The Nuclear Pore Membrane Length = 316 | Back alignment and structure |
|
| >pdb|3BG0|A Chain A, Architecture Of A Coat For The Nuclear Pore Membrane Length = 316 | Back alignment and structure |
|
| >pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393 | Back alignment and structure |
|
| >pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393 | Back alignment and structure |
|
| >pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464 | Back alignment and structure |
|
| >pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464 | Back alignment and structure |
|
| >pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445 | Back alignment and structure |
|
| >pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445 | Back alignment and structure |
|
| >pdb|2FYW|A Chain A, Crystal Structure Of A Conserved Protein Of Unknown Function From Streptococcus Pneumoniae Length = 267 | Back alignment and structure |
|
| >pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321 | Back alignment and structure |
|
| >pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321 | Back alignment and structure |
|
| >pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318 | Back alignment and structure |
|
| >pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340 | Back alignment and structure |
|
| >pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351 | Back alignment and structure |
|
| >pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340 | Back alignment and structure |
|
| >pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340 | Back alignment and structure |
|
| >pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340 | Back alignment and structure |
|
| >pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694 | Back alignment and structure |
|
| >pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694 | Back alignment and structure |
|
| >pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249 | Back alignment and structure |
|
| >pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249 | Back alignment and structure |
|
| >pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256 | Back alignment and structure |
|
| >pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256 | Back alignment and structure |
|
| >pdb|2NYD|A Chain A, Crystal Structure Of Staphylococcus Aureus Hypothetical Protein Sa1388 Length = 370 | Back alignment and structure |
|
| >pdb|3LNL|A Chain A, Crystal Structure Of Staphylococcus Aureus Protein Sa1388 Length = 370 | Back alignment and structure |
|
| >pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319 | Back alignment and structure |
|
| >pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319 | Back alignment and structure |
|
| >pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319 | Back alignment and structure |
|
| >pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314 | Back alignment and structure |
|
| >pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313 | Back alignment and structure |
|
| >pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354 | Back alignment and structure |
|
| >pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319 | Back alignment and structure |
|
| >pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430 | Back alignment and structure |
|
| >pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430 | Back alignment and structure |
|
| >pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432 | Back alignment and structure |
|
| >pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432 | Back alignment and structure |
|
| >pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3 Length = 422 | Back alignment and structure |
|
| >pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3 Length = 422 | Back alignment and structure |
|
| >pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317 | Back alignment and structure |
|
| >pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4 Length = 425 | Back alignment and structure |
|
| >pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4 Length = 425 | Back alignment and structure |
|
| >pdb|2PM6|B Chain B, Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE Copii Vesicular Coat, Native Version Length = 297 | Back alignment and structure |
|
| >pdb|2PM6|B Chain B, Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE Copii Vesicular Coat, Native Version Length = 297 | Back alignment and structure |
|
| >pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340 | Back alignment and structure |
|
| >pdb|2PM9|B Chain B, Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT OF THE Copii Vesicular Coat Length = 297 | Back alignment and structure |
|
| >pdb|2PM9|B Chain B, Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT OF THE Copii Vesicular Coat Length = 297 | Back alignment and structure |
|
| >pdb|3F3F|A Chain A, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space Group P21 Length = 351 | Back alignment and structure |
|
| >pdb|3F3F|A Chain A, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space Group P21 Length = 351 | Back alignment and structure |
|
| >pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435 | Back alignment and structure |
|
| >pdb|3EWE|A Chain A, Crystal Structure Of The Nup85SEH1 COMPLEX Length = 349 | Back alignment and structure |
|
| >pdb|3EWE|A Chain A, Crystal Structure Of The Nup85SEH1 COMPLEX Length = 349 | Back alignment and structure |
|
| >pdb|3JRP|A Chain A, Sec13 With Nup145c (Aa109-179) Insertion Blade Length = 379 | Back alignment and structure |
|
| >pdb|3JRP|A Chain A, Sec13 With Nup145c (Aa109-179) Insertion Blade Length = 379 | Back alignment and structure |
|
| >pdb|3F3P|A Chain A, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space Group P21212 Length = 351 | Back alignment and structure |
|
| >pdb|3F3P|A Chain A, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space Group P21212 Length = 351 | Back alignment and structure |
|
| >pdb|3IZ6|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 380 | Back alignment and structure |
|
| >pdb|3CFS|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|3CFS|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|3CFS|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|3CFV|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|3CFV|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|4GGD|A Chain A, Structural Analysis Of Human Cdc20 Supports Multisite Degron Recognition By ApcC. Length = 431 | Back alignment and structure |
|
| >pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 420 | Back alignment and structure |
|
| >pdb|3JRO|A Chain A, Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice Length = 753 | Back alignment and structure |
|
| >pdb|3JRO|A Chain A, Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice Length = 753 | Back alignment and structure |
|
| >pdb|4GGC|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 318 | Back alignment and structure |
|
| >pdb|2PM7|B Chain B, Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE Copii Vesicular Coat, Selenomethionine Version Length = 297 | Back alignment and structure |
|
| >pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343 | Back alignment and structure |
|
| >pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343 | Back alignment and structure |
|
| >pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310 | Back alignment and structure |
|
| >pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304 | Back alignment and structure |
|
| >pdb|2AQ5|A Chain A, Crystal Structure Of Murine Coronin-1 Length = 402 | Back alignment and structure |
|
| >pdb|2AQ5|A Chain A, Crystal Structure Of Murine Coronin-1 Length = 402 | Back alignment and structure |
|
| >pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604 | Back alignment and structure |
|
| >pdb|1NR0|A Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The Structure Of A C. Elegans Homologue Of Yeast Actin Interacting Protein 1 (Aip1). Length = 611 | Back alignment and structure |
|
| >pdb|2B4E|A Chain A, Crystal Structure Of Murine Coronin-1: Monoclinic Form Length = 402 | Back alignment and structure |
|
| >pdb|2B4E|A Chain A, Crystal Structure Of Murine Coronin-1: Monoclinic Form Length = 402 | Back alignment and structure |
|
| >pdb|4A11|B Chain B, Structure Of The Hsddb1-Hscsa Complex Length = 408 | Back alignment and structure |
|
| >pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814 | Back alignment and structure |
|
| >pdb|3ZWL|B Chain B, Structure Of Eukaryotic Translation Initiation Factor Eif3i Complex With Eif3b C-Terminus (655-700) Length = 369 | Back alignment and structure |
|
| >pdb|4AEZ|A Chain A, Crystal Structure Of Mitotic Checkpoint Complex Length = 401 | Back alignment and structure |
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 479 | |||
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 100.0 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 100.0 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 100.0 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 100.0 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 100.0 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 100.0 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 100.0 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 100.0 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 100.0 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 100.0 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 100.0 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 100.0 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 100.0 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 100.0 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 100.0 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 100.0 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 100.0 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 100.0 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 100.0 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 100.0 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 100.0 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 100.0 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 100.0 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 100.0 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 100.0 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 100.0 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 100.0 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 100.0 | |
| 2gx8_A | 397 | NIF3-related protein; structural genomics, unknown | 100.0 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 2nyd_A | 370 | UPF0135 protein SA1388; hypothetical protein SA138 | 100.0 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 100.0 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 100.0 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 100.0 | |
| 2fyw_A | 267 | Conserved hypothetical protein; structural genomic | 100.0 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 100.0 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 100.0 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 100.0 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 100.0 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 100.0 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 100.0 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 100.0 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 100.0 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 100.0 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 100.0 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 100.0 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 100.0 | |
| 2yyb_A | 242 | Hypothetical protein TTHA1606; structural genomics | 100.0 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 100.0 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 100.0 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.98 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.98 | |
| 1nmo_A | 247 | Hypothetical protein YBGI; toroidal structure, str | 99.97 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.97 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.97 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.97 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.97 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.97 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.97 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.97 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.97 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.96 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.96 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.96 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.96 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.94 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.94 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.93 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.93 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.93 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.93 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.93 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.92 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.92 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.92 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.92 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.92 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.91 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.91 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.91 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.91 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.9 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.9 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.9 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.9 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.89 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.89 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.89 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.89 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.88 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.87 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.87 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.86 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.86 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.86 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.85 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.83 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.82 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.82 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.81 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.8 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.79 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.79 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.79 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.79 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.78 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.76 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.75 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.73 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.73 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.73 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.72 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.71 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.71 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.69 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.69 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.68 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.66 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.66 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.66 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.66 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.65 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.65 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.65 | |
| 3rxy_A | 278 | NIF3 protein; structural genomics, PSI-biology, mi | 99.65 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.64 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.63 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.63 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.62 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.59 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.59 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.59 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.57 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.55 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.55 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.54 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.53 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.53 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.52 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.51 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.49 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.47 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.47 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.47 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.47 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.47 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.46 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.45 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 99.44 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 99.43 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.4 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.4 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.38 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 99.38 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 99.37 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 99.36 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.31 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 99.27 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.21 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 99.18 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 99.17 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 99.15 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 99.14 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 99.13 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 99.09 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 99.07 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 99.06 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 99.04 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 99.0 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 98.98 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 98.95 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 98.94 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.88 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.86 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 98.84 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 98.84 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 98.81 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 98.78 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 98.76 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.75 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 98.74 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 98.7 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 98.7 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.68 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 98.64 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.64 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.62 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 98.62 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 98.59 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 98.58 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 98.58 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 98.58 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 98.57 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.54 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 98.54 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 98.53 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.52 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.47 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.44 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.42 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 98.41 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 98.37 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 98.37 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 98.37 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 98.36 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 98.35 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 98.34 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 98.32 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 98.32 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.3 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 98.29 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 98.22 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 98.22 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 98.2 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 98.18 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.17 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 98.06 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 98.05 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 98.03 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 98.0 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 97.96 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 97.93 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 97.92 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 97.91 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 97.89 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 97.89 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 97.81 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 97.81 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 97.79 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 97.79 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 97.77 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 97.77 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 97.74 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 97.74 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 97.73 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 97.68 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 97.66 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 97.65 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 97.55 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 97.49 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 97.45 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 97.44 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 97.42 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 97.4 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 97.37 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 97.35 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 97.32 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 97.31 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 97.26 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 97.19 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 97.18 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 97.13 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 97.12 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 97.1 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 97.01 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 96.94 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 96.89 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 96.86 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 96.82 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 96.8 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 96.75 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 96.75 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 96.7 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 96.65 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 96.6 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 96.43 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 96.38 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 96.27 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 96.2 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 96.11 | |
| 3ott_A | 758 | Two-component system sensor histidine kinase; beta | 96.11 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 95.89 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 95.79 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 95.74 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 95.69 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 95.66 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 95.66 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 95.46 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 95.31 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 95.21 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 94.19 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 94.09 | |
| 2be1_A | 339 | Serine/threonine-protein kinase/endoribonuclease; | 93.66 | |
| 2be1_A | 339 | Serine/threonine-protein kinase/endoribonuclease; | 93.3 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 92.38 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 89.65 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 86.3 | |
| 1sqj_A | 789 | OXG-RCBH, oligoxyloglucan reducing-END-specific ce | 83.52 | |
| 3b7f_A | 394 | Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop | 83.51 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 82.45 |
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-47 Score=360.89 Aligned_cols=316 Identities=58% Similarity=1.083 Sum_probs=268.3
Q ss_pred ccccccccccc-ceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 2 INSQTLKGHQG-RVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 2 ~~~~~l~~h~~-~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
.++++|++|.+ .|++++|+|+|++|++|+.|++|+|||+.++...
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~---------------------------------- 51 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWI---------------------------------- 51 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEE----------------------------------
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcce----------------------------------
Confidence 46788999998 9999999999999999999999999998654321
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
.......+|...|.+++|+|++++|++|+.|+++++||+.++.......+.+|...|.+++|+|++++|++|+.|+.|++
T Consensus 52 ~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~i 131 (345)
T 3fm0_A 52 CKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWV 131 (345)
T ss_dssp EEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEE
Confidence 11222368999999999999999999999999999999988876678889999999999999999999999999999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEE
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 240 (479)
||++......+...+..|...|.+++|+|++++|++|+.|+.|++||.+.... .....+.+|...|++++|+|++++|
T Consensus 132 wd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~--~~~~~~~~h~~~v~~l~~sp~g~~l 209 (345)
T 3fm0_A 132 WEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDW--VCCATLEGHESTVWSLAFDPSGQRL 209 (345)
T ss_dssp EEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEE--EEEEEECCCSSCEEEEEECTTSSEE
T ss_pred EECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCE--EEEEEecCCCCceEEEEECCCCCEE
Confidence 99998766667778889999999999999999999999999999999886542 4567788999999999999999999
Q ss_pred EEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCC
Q psy14815 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSD 320 (479)
Q Consensus 241 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 320 (479)
++++.|++|++||...+.....+........+.++.++.+.|...|++++|+|++..|++++.|+.|++|+....... .
T Consensus 210 ~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~-~ 288 (345)
T 3fm0_A 210 ASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDP-Q 288 (345)
T ss_dssp EEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCT-T
T ss_pred EEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCc-c
Confidence 999999999999987666555544444456778888888866889999999999999999999999999999876422 2
Q ss_pred ceeeEEEeccccccccceeEEEecCCCC-CCCccc
Q psy14815 321 MVSFDLVHTEHRAHNQDVNCVAWNPVVP-EPQKTN 354 (479)
Q Consensus 321 ~~~~~~~~~~~~~h~~~v~~~~~sp~~~-~l~~~~ 354 (479)
.+.+.+......+|...|++++|+|+++ +|++++
T Consensus 289 ~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s 323 (345)
T 3fm0_A 289 QPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCS 323 (345)
T ss_dssp SCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEE
T ss_pred eeeEEEEeeecccccCcEeEeEEeCCCceEEEEcC
Confidence 2334444455578999999999999986 666554
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-46 Score=344.65 Aligned_cols=278 Identities=19% Similarity=0.289 Sum_probs=244.3
Q ss_pred CcccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 1 ~~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
+...++|++|.+.|++++|+|++++|++|+.||+|++||++++..+..+
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~------------------------------- 51 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSI------------------------------- 51 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE-------------------------------
T ss_pred ceeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEe-------------------------------
Confidence 3567899999999999999999999999999999999999876654433
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
..|..+|.+++|+|++++|++|+.|++|++||+.+++ .+..+.+|...|.+++|+|++++|++|+.||+|++
T Consensus 52 ------~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~l 123 (304)
T 2ynn_A 52 ------QVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE--KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKL 123 (304)
T ss_dssp ------ECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred ------eccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCc--EEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEE
Confidence 4688899999999999999999999999999999986 67788999999999999999999999999999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEcc--CC
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR--IG 237 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~ 237 (479)
||+++.. .....+.+|...|.+++|+| ++..|++|+.|++|++||++..... ......|...+..+.|+| ++
T Consensus 124 Wd~~~~~--~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~ 198 (304)
T 2ynn_A 124 WNWENNW--ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN---FTLTTGQERGVNYVDYYPLPDK 198 (304)
T ss_dssp EEGGGTT--EEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCS---EEEECCCTTCEEEEEECCSTTC
T ss_pred EECCCCc--chhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcc---ceeccCCcCcEEEEEEEEcCCC
Confidence 9998764 34566789999999999999 6789999999999999999876542 223345678899999987 67
Q ss_pred CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCC
Q psy14815 238 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAG 317 (479)
Q Consensus 238 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~ 317 (479)
++|++|+.|++|++||++. .+++.++.+| ...|.+++|+|++++|++|+.||+|++||+.+++
T Consensus 199 ~~l~s~s~D~~i~iWd~~~---------------~~~~~~~~~h-~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~- 261 (304)
T 2ynn_A 199 PYMITASDDLTIKIWDYQT---------------KSCVATLEGH-MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK- 261 (304)
T ss_dssp CEEEEEETTSEEEEEETTT---------------TEEEEEEECC-SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC-
T ss_pred CEEEEEcCCCeEEEEeCCC---------------CccceeeCCC-CCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCc-
Confidence 8999999999999999843 3678889997 7899999999999999999999999999999987
Q ss_pred CCCceeeEEEeccccccccceeEEEecCCCC
Q psy14815 318 DSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP 348 (479)
Q Consensus 318 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~ 348 (479)
+...+..|...+.+++|+|++.
T Consensus 262 ---------~~~~~~~~~~~~~~~~~~~~~~ 283 (304)
T 2ynn_A 262 ---------VEKTLNVGLERSWCIATHPTGR 283 (304)
T ss_dssp ---------EEEEECCSSSSEEEEEECTTCG
T ss_pred ---------eeeeccCCCccEEEEEECCCCC
Confidence 4444467889999999999986
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-46 Score=358.50 Aligned_cols=279 Identities=26% Similarity=0.443 Sum_probs=251.7
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
..+|.+|.++|++++|+|++++|++|+.||+|+|||+.+++....+
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l---------------------------------- 146 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL---------------------------------- 146 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEE----------------------------------
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEE----------------------------------
Confidence 4578899999999999999999999999999999999887765443
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
.+|...|.+++|+|++++|++|+.|++|++||+.+++ .+..+.+|...|.+++|+|++++|++|+.|+.|++||+
T Consensus 147 ---~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~ 221 (410)
T 1vyh_C 147 ---KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE--CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 221 (410)
T ss_dssp ---CCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC--EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred ---eccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 5789999999999999999999999999999999886 67788899999999999999999999999999999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC-------
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI------- 236 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------- 236 (479)
+++ .++..+.+|...|.++.|+|++++|++|+.|+.|++||++++.. ...+..|...|.+++|+|+
T Consensus 222 ~~~---~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~----~~~~~~h~~~v~~~~~~~~~~~~~~~ 294 (410)
T 1vyh_C 222 QTG---YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC----KAELREHRHVVECISWAPESSYSSIS 294 (410)
T ss_dssp TTC---CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEECCSCGGGGGG
T ss_pred CCC---cEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCce----eeEecCCCceEEEEEEcCcccccchh
Confidence 987 56677889999999999999999999999999999999987653 6678899999999999996
Q ss_pred -------------CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeC
Q psy14815 237 -------------GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 303 (479)
Q Consensus 237 -------------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~ 303 (479)
+.+|++|+.|+.|++||++. ..++..+.+| ...|++++|+|++++|++|+.
T Consensus 295 ~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~---------------~~~~~~~~~h-~~~v~~v~~~~~g~~l~s~s~ 358 (410)
T 1vyh_C 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVST---------------GMCLMTLVGH-DNWVRGVLFHSGGKFILSCAD 358 (410)
T ss_dssp GCCSCC-------CCEEEEEETTSEEEEEETTT---------------TEEEEEEECC-SSCEEEEEECSSSSCEEEEET
T ss_pred hhccccccccCCCCCEEEEEeCCCeEEEEECCC---------------CceEEEEECC-CCcEEEEEEcCCCCEEEEEeC
Confidence 67899999999999999843 3677888887 789999999999999999999
Q ss_pred CCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 304 DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 304 dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
||.|++||+.+++ ....+.+|...|++++|+|++++|+.++
T Consensus 359 D~~i~vwd~~~~~----------~~~~~~~h~~~v~~l~~~~~~~~l~sgs 399 (410)
T 1vyh_C 359 DKTLRVWDYKNKR----------CMKTLNAHEHFVTSLDFHKTAPYVVTGS 399 (410)
T ss_dssp TTEEEEECCTTSC----------CCEEEECCSSCEEEEEECSSSSCEEEEE
T ss_pred CCeEEEEECCCCc----------eEEEEcCCCCcEEEEEEcCCCCEEEEEe
Confidence 9999999998876 3333468999999999999999997665
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-45 Score=340.56 Aligned_cols=283 Identities=21% Similarity=0.352 Sum_probs=244.8
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC----------CCccceEEEeecCCcEEEec
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG----------LPVETSLRQLVEDKNIRLWG 71 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~w~ 71 (479)
...++|++|.+.|++++|+|++++|++|+.||+|++||+.+++.+..+.. .+.+..+++++.|+.+++|+
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~ 125 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 34678999999999999999999999999999999999988877665543 35677889999999999999
Q ss_pred CCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEE
Q psy14815 72 KESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT 151 (479)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~ 151 (479)
+........ ......+|...|.++.|++++ .+++++.|++|++||+++++ ....+.+|...|.+++|+|+++++++
T Consensus 126 ~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s 201 (340)
T 1got_B 126 LKTREGNVR-VSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQ--QTTTFTGHTGDVMSLSLAPDTRLFVS 201 (340)
T ss_dssp TTTCSBSCE-EEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred CccCCCcce-eEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCc--EEEEEcCCCCceEEEEECCCCCEEEE
Confidence 975432222 222346899999999999876 58999999999999999986 66788999999999999999999999
Q ss_pred EeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeee--cCCCccEE
Q psy14815 152 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL--KSHTSTVW 229 (479)
Q Consensus 152 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~~v~ 229 (479)
|+.||.|++||+++. .....+.+|...|++++|+|++++|++|+.||+|++||++.... +..+ ..+...|+
T Consensus 202 g~~d~~v~~wd~~~~---~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~----~~~~~~~~~~~~v~ 274 (340)
T 1got_B 202 GACDASAKLWDVREG---MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE----LMTYSHDNIICGIT 274 (340)
T ss_dssp EETTSCEEEEETTTC---SEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE----EEEECCTTCCSCEE
T ss_pred EeCCCcEEEEECCCC---eeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE----EEEEccCCcccceE
Confidence 999999999999987 55677889999999999999999999999999999999987653 2333 33445799
Q ss_pred EEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEE
Q psy14815 230 SLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 309 (479)
Q Consensus 230 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~v 309 (479)
+++|+|++++|++|+.|+.|++||+... ..+..+.+| ..+|.+++|+|++.+|++|+.|+.|++
T Consensus 275 ~~~~s~~g~~l~~g~~d~~i~vwd~~~~---------------~~~~~~~~h-~~~v~~~~~s~dg~~l~s~s~D~~i~i 338 (340)
T 1got_B 275 SVSFSKSGRLLLAGYDDFNCNVWDALKA---------------DRAGVLAGH-DNRVSCLGVTDDGMAVATGSWDSFLKI 338 (340)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTC---------------CEEEEEECC-SSCEEEEEECTTSSCEEEEETTSCEEE
T ss_pred EEEECCCCCEEEEECCCCeEEEEEcccC---------------cEeeEeecC-CCcEEEEEEcCCCCEEEEEcCCccEEe
Confidence 9999999999999999999999998443 456778887 789999999999999999999999999
Q ss_pred cc
Q psy14815 310 FK 311 (479)
Q Consensus 310 w~ 311 (479)
||
T Consensus 339 Wd 340 (340)
T 1got_B 339 WN 340 (340)
T ss_dssp EC
T ss_pred cC
Confidence 96
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-45 Score=340.49 Aligned_cols=281 Identities=20% Similarity=0.331 Sum_probs=244.7
Q ss_pred cccccccccceEEEEECCC----CCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCce
Q psy14815 4 SQTLKGHQGRVWNVSWNPQ----GTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKF 79 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~----~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~ 79 (479)
.+.+++|.+.|++++|+|+ +++|+||+.|++|+|||+..++..
T Consensus 25 ~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~--------------------------------- 71 (321)
T 3ow8_A 25 FKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLD--------------------------------- 71 (321)
T ss_dssp EEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEE---------------------------------
T ss_pred eeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCee---------------------------------
Confidence 4677899999999999984 679999999999999998643321
Q ss_pred eeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy14815 80 TAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 159 (479)
Q Consensus 80 ~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~ 159 (479)
......+|...|.+++|++++.++++++.|++|++||+.+++ .+..+..+...+.+++|+|++++|++|+.||.|+
T Consensus 72 --~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~--~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~ 147 (321)
T 3ow8_A 72 --LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGK--QIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVN 147 (321)
T ss_dssp --EEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE--EEEEEECCTTCCCCEEECTTSSEEEEECTTSEEE
T ss_pred --eeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCC--EEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEE
Confidence 111236899999999999999999999999999999999996 5677888888999999999999999999999999
Q ss_pred EEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE
Q psy14815 160 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
+||+++. .....+..|...+.+++|+|++++|++|+.||.|++||+++++ .+..+.+|..+|.+++|+|++++
T Consensus 148 i~~~~~~---~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~----~~~~~~~h~~~v~~l~~spd~~~ 220 (321)
T 3ow8_A 148 IFGVESG---KKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK----LLHTLEGHAMPIRSLTFSPDSQL 220 (321)
T ss_dssp EEETTTC---SEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE----EEEEECCCSSCCCEEEECTTSCE
T ss_pred EEEcCCC---ceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCc----EEEEEcccCCceeEEEEcCCCCE
Confidence 9999987 4455677788899999999999999999999999999998765 46778899999999999999999
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCC
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS 319 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 319 (479)
|++++.|+.|++||++.. .+...+.+| ...|.+++|+|++++|++++.|++|++||+.+++
T Consensus 221 l~s~s~dg~i~iwd~~~~---------------~~~~~~~~h-~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~--- 281 (321)
T 3ow8_A 221 LVTASDDGYIKIYDVQHA---------------NLAGTLSGH-ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT--- 281 (321)
T ss_dssp EEEECTTSCEEEEETTTC---------------CEEEEECCC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---
T ss_pred EEEEcCCCeEEEEECCCc---------------ceeEEEcCC-CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE---
Confidence 999999999999998543 456778887 7899999999999999999999999999999886
Q ss_pred CceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 320 DMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 320 ~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
++. .+.+|...|.+++|+|++++|+.++
T Consensus 282 ------~~~-~~~~h~~~v~~v~~s~~g~~l~s~~ 309 (321)
T 3ow8_A 282 ------CVH-TFFDHQDQVWGVKYNGNGSKIVSVG 309 (321)
T ss_dssp ------EEE-EECCCSSCEEEEEECTTSSEEEEEE
T ss_pred ------EEE-EEcCCCCcEEEEEECCCCCEEEEEe
Confidence 344 3468999999999999999887654
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=334.85 Aligned_cols=287 Identities=22% Similarity=0.327 Sum_probs=243.7
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEeccccccccccc----------CCCccceEEEeecCCcEEEec
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLH----------GLPVETSLRQLVEDKNIRLWG 71 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~----------~~~~~~~~~~~~~~~~i~~w~ 71 (479)
...++|++|.+.|++++|+|++++|+||+.||+|++||..+++....+. ..+.+..+++++.|+.+++|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 3467899999999999999999999999999999999988776654443 346788899999999999998
Q ss_pred CCCCCCc-eeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC--CCCE
Q psy14815 72 KESFGNK-FTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK--NGQF 148 (479)
Q Consensus 72 ~~~~~~~-~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~ 148 (479)
+...... .........+|...|.+++|+|++..|++++.|++|++||+++++ .+..+.+|...|.+++|+| ++++
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~g~~ 212 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ--LLQSFHGHGADVLCLDLAPSETGNT 212 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECCCSSCCE
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe--EEEEEcCCCCCeEEEEEEeCCCCCE
Confidence 8643211 111122235799999999999999999999999999999999987 6778899999999999988 5689
Q ss_pred EEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccE
Q psy14815 149 LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTV 228 (479)
Q Consensus 149 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v 228 (479)
|++|+.||.|++||++++ .+...+..|...|++++|+|++++|++|+.|++|++||++.... ........+...+
T Consensus 213 l~sgs~Dg~v~~wd~~~~---~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~--~~~~~~~~~~~~~ 287 (354)
T 2pbi_B 213 FVSGGCDKKAMVWDMRSG---QCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADRE--VAIYSKESIIFGA 287 (354)
T ss_dssp EEEEETTSCEEEEETTTC---CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE--EEEECCTTCCSCE
T ss_pred EEEEeCCCeEEEEECCCC---cEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE--EEEEcCCCcccce
Confidence 999999999999999987 56677889999999999999999999999999999999987543 1122222344578
Q ss_pred EEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEE
Q psy14815 229 WSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIR 308 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~ 308 (479)
.+++|+|++++|++|+.|+.|++||+... ..+..+.+| ...|++++|+|++++|++|+.||+|+
T Consensus 288 ~~~~~s~~g~~l~~g~~d~~i~vwd~~~~---------------~~~~~l~~h-~~~v~~l~~spdg~~l~sgs~D~~v~ 351 (354)
T 2pbi_B 288 SSVDFSLSGRLLFAGYNDYTINVWDVLKG---------------SRVSILFGH-ENRVSTLRVSPDGTAFCSGSWDHTLR 351 (354)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTC---------------SEEEEECCC-SSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred eEEEEeCCCCEEEEEECCCcEEEEECCCC---------------ceEEEEECC-CCcEEEEEECCCCCEEEEEcCCCCEE
Confidence 99999999999999999999999998443 446677786 88999999999999999999999999
Q ss_pred Ecc
Q psy14815 309 IFK 311 (479)
Q Consensus 309 vw~ 311 (479)
+|+
T Consensus 352 vW~ 354 (354)
T 2pbi_B 352 VWA 354 (354)
T ss_dssp EEC
T ss_pred ecC
Confidence 996
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-43 Score=355.66 Aligned_cols=328 Identities=16% Similarity=0.204 Sum_probs=256.2
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEeccccccc--cccc----------CCCccceEEEeecC----Cc
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPY--EKLH----------GLPVETSLRQLVED----KN 66 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~--~~~~----------~~~~~~~~~~~~~~----~~ 66 (479)
..++|.+|.+.|++++|+|+|++||+|+.||+|+|||+.+++.. ..+. ..+++..+++.+.+ +.
T Consensus 51 ~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~ 130 (611)
T 1nr0_A 51 DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGH 130 (611)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEE
T ss_pred cCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeE
Confidence 45678999999999999999999999999999999998754432 2222 23556667766654 47
Q ss_pred EEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCC-EEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC
Q psy14815 67 IRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGN-FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN 145 (479)
Q Consensus 67 i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~ 145 (479)
+++||.... .....+|...|.+++|+|++. .|++|+.|++|++||..+++ ....+.+|...|.+++|+|+
T Consensus 131 v~~wd~~~~-------~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~--~~~~l~~H~~~V~~v~fspd 201 (611)
T 1nr0_A 131 VFLFDTGTS-------NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK--FKSTFGEHTKFVHSVRYNPD 201 (611)
T ss_dssp EEETTTCCB-------CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE--EEEEECCCSSCEEEEEECTT
T ss_pred EEEeeCCCC-------cceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe--EeeeeccccCceEEEEECCC
Confidence 889985421 112468999999999999986 69999999999999998875 56788999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEeCCCCceeeeeeee-------ccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccce---
Q psy14815 146 GQFLATCSRDKSVWVWEVGEEDEYECAAVIN-------AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW--- 215 (479)
Q Consensus 146 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-------~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--- 215 (479)
+++|++|+.|+.|++||+.+++ ....+. +|...|.+++|+|++++|++++.|++|++||+++++...
T Consensus 202 g~~las~s~D~~i~lwd~~~g~---~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~ 278 (611)
T 1nr0_A 202 GSLFASTGGDGTIVLYNGVDGT---KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIP 278 (611)
T ss_dssp SSEEEEEETTSCEEEEETTTCC---EEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEECCCcEEEEECCCCc---EeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeec
Confidence 9999999999999999998874 333342 799999999999999999999999999999998654211
Q ss_pred ------------------------------------EeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCC
Q psy14815 216 ------------------------------------INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 259 (479)
Q Consensus 216 ------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 259 (479)
.....+.+|...|++++|+|++++|++++.|++|++||+.....
T Consensus 279 ~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~ 358 (611)
T 1nr0_A 279 VGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGIS 358 (611)
T ss_dssp CCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCce
Confidence 12234568999999999999999999999999999999876432
Q ss_pred CCCCCCCCCC------------------------------------------------------C---------------
Q psy14815 260 SAGIPTPDND------------------------------------------------------S--------------- 270 (479)
Q Consensus 260 ~~~~~~~~~~------------------------------------------------------~--------------- 270 (479)
...+...+.. .
T Consensus 359 ~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~ 438 (611)
T 1nr0_A 359 NRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYS 438 (611)
T ss_dssp EECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEE
T ss_pred eeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEe
Confidence 1111000000 0
Q ss_pred ceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 271 VWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 271 ~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
..+ +..+. +...+.+++|+|++++|++|+.|++|++||+..+. ...... .+|...|++++||||+++|
T Consensus 439 ~~~-~~~~~--~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~-------~~~~~~--~~h~~~v~~v~fspdg~~l 506 (611)
T 1nr0_A 439 HGK-LTEVP--ISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGAS-------VSEVKT--IVHPAEITSVAFSNNGAFL 506 (611)
T ss_dssp TTE-EEEEE--CSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTE-------EEEEEE--EECSSCEEEEEECTTSSEE
T ss_pred CCc-eeeee--cCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCc-------eeeeec--cCCCCceEEEEECCCCCEE
Confidence 000 11111 24568899999999999999999999999997754 111222 5799999999999999999
Q ss_pred Cccc
Q psy14815 351 QKTN 354 (479)
Q Consensus 351 ~~~~ 354 (479)
+.+.
T Consensus 507 as~s 510 (611)
T 1nr0_A 507 VATD 510 (611)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 7654
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-43 Score=326.14 Aligned_cols=300 Identities=35% Similarity=0.692 Sum_probs=236.7
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
.++++|++|.+.|++++|+|+ +|++|+.|++|++||+..+.. ..
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~----------------------------------~~ 48 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDF----------------------------------TL 48 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCC----------------------------------EE
T ss_pred ccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCe----------------------------------EE
Confidence 467889999999999999987 999999999999999865321 01
Q ss_pred eEEe-ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCC-----eEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy14815 82 KAIL-SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG-----QFECNATLEGHENEVKSVTWSKNGQFLATCSRD 155 (479)
Q Consensus 82 ~~~~-~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~-----~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d 155 (479)
.... ..+|...|.+++|+|++++|++|+.|++|++||+... .......+.+|...|.+++|+|++++|++|+.|
T Consensus 49 ~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D 128 (330)
T 2hes_X 49 IDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRD 128 (330)
T ss_dssp EEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETT
T ss_pred EEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCC
Confidence 1111 1249999999999999999999999999999998542 123567788999999999999999999999999
Q ss_pred CcEEEEEeCCC-CceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEc
Q psy14815 156 KSVWVWEVGEE-DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD 234 (479)
Q Consensus 156 g~i~vwd~~~~-~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~ 234 (479)
+.|++||++.. ...+++..+.+|...|++++|+|++++|++|+.|++|++||...+. +.++..+.+|...|.+++|+
T Consensus 129 ~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~--~~~~~~~~~h~~~v~~~~~~ 206 (330)
T 2hes_X 129 KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDD--WECVAVLNGHEGTVWSSDFD 206 (330)
T ss_dssp SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEEC
T ss_pred CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCC--eeEEEEccCCCCcEEEEEec
Confidence 99999999543 3345667788999999999999999999999999999999987543 24577889999999999999
Q ss_pred cC--CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 235 RI--GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 235 ~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
|+ +.+|++++.|++|++||+....... ...+.+...+.+.|...|++++|++++ +|++++.||.|++|+.
T Consensus 207 ~~~~~~~l~s~s~D~~v~iw~~~~~~~~~-------~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~ 278 (330)
T 2hes_X 207 KTEGVFRLCSGSDDSTVRVWKYMGDDEDD-------QQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEE 278 (330)
T ss_dssp CSSSSCEEEEEETTSCEEEEEEEEECTTS-------CEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEE
T ss_pred CCCCeeEEEEEeCCCeEEEEEecCCCccc-------cceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEc
Confidence 98 6789999999999999986543211 123455666666458899999999765 8999999999999998
Q ss_pred CCCCCCCCceeeEEEecccccccc-ceeEEEecC--CCCCCCccc
Q psy14815 313 NPEAGDSDMVSFDLVHTEHRAHNQ-DVNCVAWNP--VVPEPQKTN 354 (479)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~sp--~~~~l~~~~ 354 (479)
..++ +.+......+|.. .|++++|+| ++++|++++
T Consensus 279 ~~~~-------~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s 316 (330)
T 2hes_X 279 VDGE-------WKVFAKRALCHGVYEINVVKWLELNGKTILATGG 316 (330)
T ss_dssp ETTE-------EEEEEEESCTTTTSCEEEEEEC-----CCEEEEE
T ss_pred CCCc-------eEEEeccccccccceEEEEEEecCCCceEEEEec
Confidence 7653 1123334457876 899999999 688887654
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-43 Score=354.90 Aligned_cols=326 Identities=18% Similarity=0.205 Sum_probs=255.3
Q ss_pred ccccccccccceEEEEECCCCC-eEEEeeCCCcEEEEecccccccccccCC----------CccceEEEeecCCcEEEec
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWVMVIREPYEKLHGL----------PVETSLRQLVEDKNIRLWG 71 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~-~l~t~~~dg~v~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~~i~~w~ 71 (479)
+..+|.+|.+.|++++|+|+++ +|++|+.|++|++||..+++....+..| +++..+++++.|+++++||
T Consensus 139 ~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd 218 (611)
T 1nr0_A 139 SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYN 218 (611)
T ss_dssp BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEE
Confidence 3467899999999999999987 5999999999999999887766666554 5677899999999999999
Q ss_pred CCCCCCceeeeE--EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEE-----------------------
Q psy14815 72 KESFGNKFTAKA--ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFEC----------------------- 126 (479)
Q Consensus 72 ~~~~~~~~~~~~--~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~----------------------- 126 (479)
............ ....+|...|.+++|+|++++|++++.|++|++||+.+++...
T Consensus 219 ~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (611)
T 1nr0_A 219 GVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALV 298 (611)
T ss_dssp TTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEE
T ss_pred CCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEE
Confidence 874322111000 0012799999999999999999999999999999998875321
Q ss_pred ------------------eEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeee---------------
Q psy14815 127 ------------------NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA--------------- 173 (479)
Q Consensus 127 ------------------~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--------------- 173 (479)
...+.+|...|.+++|+|++++|++++.|+.|++||+.++.......
T Consensus 299 s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~ 378 (611)
T 1nr0_A 299 SISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSK 378 (611)
T ss_dssp EEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTT
T ss_pred EEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCC
Confidence 23456899999999999999999999999999999987643211000
Q ss_pred ------------------------------e----------------------------------eeccccceeEEEEec
Q psy14815 174 ------------------------------V----------------------------------INAHIQDVKKVRFHP 189 (479)
Q Consensus 174 ------------------------------~----------------------------------~~~~~~~v~~l~~~~ 189 (479)
. ...|...+.+++|+|
T Consensus 379 ~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~sp 458 (611)
T 1nr0_A 379 GDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSN 458 (611)
T ss_dssp SCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECT
T ss_pred CcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeC
Confidence 0 001234578999999
Q ss_pred CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCC
Q psy14815 190 FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND 269 (479)
Q Consensus 190 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 269 (479)
++++|++|+.|++|++||+..... ..... ..|...|++++|+|++++|++++.|++|++||+....
T Consensus 459 dg~~lasgs~D~~v~lwd~~~~~~--~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~----------- 524 (611)
T 1nr0_A 459 DKQFVAVGGQDSKVHVYKLSGASV--SEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNF----------- 524 (611)
T ss_dssp TSCEEEEEETTSEEEEEEEETTEE--EEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTT-----------
T ss_pred CCCEEEEeCCCCeEEEEEccCCce--eeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCC-----------
Confidence 999999999999999999976432 22333 6799999999999999999999999999999986522
Q ss_pred CceEEEEE-EeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEecccccc-ccceeEEEecCCC
Q psy14815 270 SVWKCVCT-LSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH-NQDVNCVAWNPVV 347 (479)
Q Consensus 270 ~~~~~~~~-~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~sp~~ 347 (479)
++... ..+.|...|.+++|+|++++|++|+.|++|++|++..+.. .......+| ...|++++|+|++
T Consensus 525 ---~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~--------~~~~~~~~h~~~~v~~v~fs~d~ 593 (611)
T 1nr0_A 525 ---ELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSD--------HPIIIKGAHAMSSVNSVIWLNET 593 (611)
T ss_dssp ---EESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTS--------CCEEETTSSTTSCEEEEEEEETT
T ss_pred ---ceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCccc--------ccchhhccCcccCeeEEEEcCCC
Confidence 11111 1221478999999999999999999999999999987641 121335688 8999999999999
Q ss_pred CCCCccc
Q psy14815 348 PEPQKTN 354 (479)
Q Consensus 348 ~~l~~~~ 354 (479)
+ |++++
T Consensus 594 ~-l~s~~ 599 (611)
T 1nr0_A 594 T-IVSAG 599 (611)
T ss_dssp E-EEEEE
T ss_pred E-EEEec
Confidence 8 75543
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-42 Score=320.91 Aligned_cols=287 Identities=23% Similarity=0.382 Sum_probs=238.7
Q ss_pred cccccccccccceEEEEECCCC-CeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~-~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
.+..+|+||.+.|++++|+|++ ++|+||+.|++|++|++...... ..
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~--------------------------------~~ 55 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQK--------------------------------FG 55 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTE--------------------------------EE
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCcc--------------------------------cc
Confidence 4677899999999999999965 89999999999999998543211 01
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
.......+|...|.+++|+|++++|++|+.|++|++||+.+++ ....+.+|...|.+++|+|++.+|++|+.|+.|++
T Consensus 56 ~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~v 133 (319)
T 3frx_A 56 VPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGE--TYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKV 133 (319)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred ccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCC--eeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 1122346899999999999999999999999999999999996 67788999999999999999999999999999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecC------CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEc
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPF------DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD 234 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~ 234 (479)
||++. .....+.+|...|.+++|+|. +..+++++.|+.|++||+++.. ....+.+|...|.+++|+
T Consensus 134 wd~~~----~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~----~~~~~~~h~~~v~~~~~s 205 (319)
T 3frx_A 134 WTIKG----QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ----IEADFIGHNSNINTLTAS 205 (319)
T ss_dssp EETTS----CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE----EEEEECCCCSCEEEEEEC
T ss_pred EECCC----CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch----hheeecCCCCcEEEEEEc
Confidence 99975 455677889999999999985 4489999999999999998654 366788999999999999
Q ss_pred cCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCC
Q psy14815 235 RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 314 (479)
Q Consensus 235 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~ 314 (479)
|++++|++++.||.|++||+... +++..+.. ...|.+++|+|++.+|++++. +.+++|++..
T Consensus 206 p~g~~l~s~~~dg~i~iwd~~~~---------------~~~~~~~~--~~~v~~~~~sp~~~~la~~~~-~~i~v~~~~~ 267 (319)
T 3frx_A 206 PDGTLIASAGKDGEIMLWNLAAK---------------KAMYTLSA--QDEVFSLAFSPNRYWLAAATA-TGIKVFSLDP 267 (319)
T ss_dssp TTSSEEEEEETTCEEEEEETTTT---------------EEEEEEEC--CSCEEEEEECSSSSEEEEEET-TEEEEEEETT
T ss_pred CCCCEEEEEeCCCeEEEEECCCC---------------cEEEEecC--CCcEEEEEEcCCCCEEEEEcC-CCcEEEEeCc
Confidence 99999999999999999998443 55666665 458999999999999988875 5699999987
Q ss_pred CCCCCCceeeEEEec----cccccccceeEEEecCCCCCCCccc
Q psy14815 315 EAGDSDMVSFDLVHT----EHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 315 ~~~~~~~~~~~~~~~----~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.. ....+.. ....|...+.+++|+|||++|+.+.
T Consensus 268 ~~------~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~ 305 (319)
T 3frx_A 268 QY------LVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGY 305 (319)
T ss_dssp EE------EEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEE
T ss_pred Ce------eeeccCccccccccCcCcceeEEEECCCCCEEEEee
Confidence 54 0001111 1234567899999999999997654
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=336.94 Aligned_cols=290 Identities=20% Similarity=0.337 Sum_probs=241.4
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC----------CccceEEEeecCCcEEEecC
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL----------PVETSLRQLVEDKNIRLWGK 72 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~~i~~w~~ 72 (479)
+.++|+||.+.|++++|+|++++|+||+.||+|+|||+.+++....+..+ +++..+++++.|+.+++|++
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~ 137 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNL 137 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEEC
T ss_pred EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEEC
Confidence 46789999999999999999999999999999999999988876665543 66788999999999999998
Q ss_pred CCCCCce--eeeEEeccccCCcEEEEEECCC-CCEEEEEECCCeEEEEECCCCeEEEeEEE-----eCCCCcEEEEEEcC
Q psy14815 73 ESFGNKF--TAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATL-----EGHENEVKSVTWSK 144 (479)
Q Consensus 73 ~~~~~~~--~~~~~~~~~~~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~-----~~~~~~v~~l~~~~ 144 (479)
....... ........+|...|.++.|+|+ +..|++|+.|++|++||+++++ .+..+ .+|...|.+++|++
T Consensus 138 ~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~--~~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 138 SSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQ--RISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp CCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCC--EEEEECCCSSSSCCSCEEEEEECS
T ss_pred CCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCc--EEEEeecccCCCCccCeEEEEeec
Confidence 7432111 1112234689999999999996 4679999999999999999987 34444 57889999999987
Q ss_pred -CCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC
Q psy14815 145 -NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS 223 (479)
Q Consensus 145 -~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 223 (479)
++++|++|+.||.|++||++... .....+.+|...|++++|+|++++|++|+.||+|++||++++.. +..+..
T Consensus 216 ~~~~~l~sgs~D~~v~~wd~~~~~--~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~----~~~~~~ 289 (380)
T 3iz6_a 216 LNANMFISGSCDTTVRLWDLRITS--RAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQ----LQVYNR 289 (380)
T ss_dssp SSCCEEEEEETTSCEEEEETTTTC--CCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEE----EEEECC
T ss_pred CCCCEEEEEECCCeEEEEECCCCC--cceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcE----EEEecc
Confidence 88999999999999999998543 45667889999999999999999999999999999999997653 333322
Q ss_pred -------CCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEE----eccccccEEEEEec
Q psy14815 224 -------HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL----SGHHGRTIYDISWC 292 (479)
Q Consensus 224 -------~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~l~~~ 292 (479)
+...|++++|+|++++|++|+.||.|++||+... +.+..+ .+ |...|++++|+
T Consensus 290 ~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~---------------~~~~~~~~~~~~-h~~~v~~l~~s 353 (380)
T 3iz6_a 290 EPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLA---------------EMVLNLGTLQNS-HEGRISCLGLS 353 (380)
T ss_dssp CCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTC---------------CEEEEECCSCSS-CCCCCCEEEEC
T ss_pred cccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCC---------------ceEEEEecccCC-CCCceEEEEEC
Confidence 2335899999999999999999999999998543 223333 34 48899999999
Q ss_pred CCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 293 HLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 293 ~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
|++++|++|+.|++|++|++....
T Consensus 354 ~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 354 SDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp SSSSEEEEECTTSCEEEEECCSSS
T ss_pred CCCCEEEEeeCCCCEEEEecCCCc
Confidence 999999999999999999987654
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-42 Score=319.14 Aligned_cols=282 Identities=26% Similarity=0.441 Sum_probs=241.5
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
.+..++.+|.+.|++++|+|++++|++|+.||.|++|++.+++....+
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~-------------------------------- 61 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-------------------------------- 61 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE--------------------------------
T ss_pred eeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhh--------------------------------
Confidence 346788999999999999999999999999999999998765543322
Q ss_pred eEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14815 82 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vw 161 (479)
.+|...|.+++|+|++++|++++.|+.|++||+++++ .+..+.+|...|.+++|+|++++|++|+.||.|++|
T Consensus 62 -----~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iw 134 (312)
T 4ery_A 62 -----SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 134 (312)
T ss_dssp -----CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred -----ccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCc--EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEE
Confidence 5788999999999999999999999999999999986 667888999999999999999999999999999999
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeee-ecCCCccEEEEEEccCCCEE
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT-LKSHTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l 240 (479)
|+++. .....+..|..+|.+++|+|++++|++++.||.|++||++++.. +.. ...+...+..++|+|++++|
T Consensus 135 d~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l 207 (312)
T 4ery_A 135 DVKTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC----LKTLIDDDNPPVSFVKFSPNGKYI 207 (312)
T ss_dssp ETTTC---CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE----EEEECCSSCCCEEEEEECTTSSEE
T ss_pred ECCCC---EEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCce----eeEEeccCCCceEEEEECCCCCEE
Confidence 99987 55667888999999999999999999999999999999997653 333 34567789999999999999
Q ss_pred EEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccc--cEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCC
Q psy14815 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR--TIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 318 (479)
Q Consensus 241 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 318 (479)
++++.|+.|++||++.. +++..+.+|... .+......+++.+|++|+.||.|++||+.+++
T Consensus 208 ~~~~~d~~i~iwd~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~-- 270 (312)
T 4ery_A 208 LAATLDNTLKLWDYSKG---------------KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE-- 270 (312)
T ss_dssp EEEETTTEEEEEETTTT---------------EEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC--
T ss_pred EEEcCCCeEEEEECCCC---------------cEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch--
Confidence 99999999999998443 556777776322 22233334678899999999999999999887
Q ss_pred CCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 319 SDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 319 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+...+.+|...|.+++|+|+++.|+.+.
T Consensus 271 --------~~~~~~~h~~~v~~~~~~p~~~~l~s~~ 298 (312)
T 4ery_A 271 --------IVQKLQGHTDVVISTACHPTENIIASAA 298 (312)
T ss_dssp --------EEEEECCCSSCEEEEEECSSSSEEEEEE
T ss_pred --------hhhhhhccCCcEEEEeecCcCCceEEEE
Confidence 4445578999999999999999887653
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-42 Score=326.91 Aligned_cols=287 Identities=16% Similarity=0.215 Sum_probs=225.6
Q ss_pred ccccccccceEEEEECCCCCeEEEeeC------CCcEEEEecccccccccccC----C---------CccceEEEeecCC
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGE------DKNIRLWVMVIREPYEKLHG----L---------PVETSLRQLVEDK 65 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~------dg~v~iwd~~~~~~~~~~~~----~---------~~~~~~~~~~~~~ 65 (479)
....+|++.|++++|+|||++|++|+. |++|++|+..++.+...+.. + ..+..+++++.++
T Consensus 36 ~~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg 115 (357)
T 4g56_B 36 TAPACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSG 115 (357)
T ss_dssp ----CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTS
T ss_pred CCcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCC
Confidence 345679999999999999999999997 78899999877665433321 1 1234577788999
Q ss_pred cEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC
Q psy14815 66 NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN 145 (479)
Q Consensus 66 ~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~ 145 (479)
+|++||+........ ......+|...|++++|+|++++|++|+.|+.|++||+++++ .+..+.+|...|.+++|+++
T Consensus 116 ~v~lWd~~~~~~~~~-~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~--~~~~~~~h~~~v~~v~~s~~ 192 (357)
T 4g56_B 116 AVELWEILEKESLLV-NKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA--VLKSYNAHSSEVNCVAACPG 192 (357)
T ss_dssp CEEEC--------CC-CCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTT
T ss_pred EEEEeeccccceeEE-EeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc--EEEEEcCCCCCEEEEEEccC
Confidence 999999985332221 222345899999999999999999999999999999999986 67888999999999999998
Q ss_pred CC-EEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEeeeeecC
Q psy14815 146 GQ-FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLKS 223 (479)
Q Consensus 146 ~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 223 (479)
+. ++++++.||.|++||+++++... ......+...+++++|+|+ +.+|++|+.|+.|++||+++++. ...+..
T Consensus 193 ~~~~~~s~~~dg~v~~wd~~~~~~~~-~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~----~~~~~~ 267 (357)
T 4g56_B 193 KDTIFLSCGEDGRILLWDTRKPKPAT-RIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDS----AQTSAV 267 (357)
T ss_dssp CSSCEEEEETTSCEEECCTTSSSCBC-BCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGG----CEEECC
T ss_pred CCceeeeeccCCceEEEECCCCceee-eeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcE----eEEEec
Confidence 75 78999999999999999875322 2234456778999999997 57899999999999999997764 677889
Q ss_pred CCccEEEEEEccCC-CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC-CCCeEEEE
Q psy14815 224 HTSTVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATA 301 (479)
Q Consensus 224 ~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~-~~~~l~~~ 301 (479)
|...|++++|+|++ ++|++|+.|++|+|||++.. +++.. .+| ...|++++|+| ++.+|+++
T Consensus 268 ~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~---------------~~~~~-~~H-~~~V~~vafsP~d~~~l~s~ 330 (357)
T 4g56_B 268 HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS---------------EVFRD-LSH-RDFVTGVAWSPLDHSKFTTV 330 (357)
T ss_dssp CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC---------------EEEEE-CCC-SSCEEEEEECSSSTTEEEEE
T ss_pred cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC---------------cEeEE-CCC-CCCEEEEEEeCCCCCEEEEE
Confidence 99999999999987 57899999999999998432 44443 355 78999999998 78999999
Q ss_pred eCCCeEEEcccCCCC
Q psy14815 302 CGDDAIRIFKENPEA 316 (479)
Q Consensus 302 ~~dg~i~vw~~~~~~ 316 (479)
+.||+|++|++....
T Consensus 331 s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 331 GWDHKVLHHHLPSEG 345 (357)
T ss_dssp ETTSCEEEEECC---
T ss_pred cCCCeEEEEECCCCC
Confidence 999999999997654
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-42 Score=322.92 Aligned_cols=287 Identities=14% Similarity=0.213 Sum_probs=225.5
Q ss_pred ccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 7 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
...|...|.+++|+|||++|++++ |+++|+||... .+|+........ ......
T Consensus 26 ~~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~-------------------------~~~~~~~~~~~~-~~~~~~ 78 (344)
T 4gqb_B 26 PACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSL-------------------------WLFKDPCAAPNE-GFCSAG 78 (344)
T ss_dssp CSSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEE-------------------------EEESSGGGTTCG-GGCSEE
T ss_pred cccccCCEEEEEECCCCCEEEEEe-CCceEEeecee-------------------------eeeccccccCCc-ceeeee
Confidence 456788899999999999999887 77899997421 122111100000 000111
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEE--eEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeC
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFEC--NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 164 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~ 164 (479)
..+...|.+++|+|++ .|++|+.||+|+|||+.+++... ...+.+|.+.|++++|+|++++|++|+.||.|++||++
T Consensus 79 ~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~ 157 (344)
T 4gqb_B 79 VQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA 157 (344)
T ss_dssp EEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 3466789999999985 78899999999999999886322 23456899999999999999999999999999999999
Q ss_pred CCCceeeeeeeeccccceeEEEEecCC-CEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC-CCEEEE
Q psy14815 165 EEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLAT 242 (479)
Q Consensus 165 ~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s 242 (479)
++ +.+..+.+|...|++++|+|++ .+|++++.|++|++||+++++.. .......|...+.+++|+|+ +++|++
T Consensus 158 ~~---~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~l~s 232 (344)
T 4gqb_B 158 QQ---VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPA--SQIGCSAPGYLPTSLAWHPQQSEVFVF 232 (344)
T ss_dssp TT---EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCE--EECC----CCCEEEEEECSSCTTEEEE
T ss_pred CC---cEEEEEcCcCCceEEEEecCCCCCceeeecccccccccccccccee--eeeecceeeccceeeeecCCCCcceEE
Confidence 87 6778889999999999999987 57899999999999999987641 11223456678999999985 567889
Q ss_pred eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCC-CeEEEEeCCCeEEEcccCCCCCCCCc
Q psy14815 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIFKENPEAGDSDM 321 (479)
Q Consensus 243 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~ 321 (479)
|+.||.|++||++.. +++.++.+| ...|++++|+|++ ++|++|+.|++|+|||+.+++
T Consensus 233 g~~dg~v~~wd~~~~---------------~~~~~~~~h-~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~----- 291 (344)
T 4gqb_B 233 GDENGTVSLVDTKST---------------SCVLSSAVH-SQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE----- 291 (344)
T ss_dssp EETTSEEEEEESCC-----------------CCEEEECC-SSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE-----
T ss_pred eccCCcEEEEECCCC---------------cEEEEEcCC-CCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc-----
Confidence 999999999998543 446778887 8899999999997 589999999999999998876
Q ss_pred eeeEEEeccccccccceeEEEecCCCCCC-Ccc
Q psy14815 322 VSFDLVHTEHRAHNQDVNCVAWNPVVPEP-QKT 353 (479)
Q Consensus 322 ~~~~~~~~~~~~h~~~v~~~~~sp~~~~l-~~~ 353 (479)
+.. ..+|.+.|++++|+|+++.| +++
T Consensus 292 -----~~~-~~~H~~~V~~v~~sp~~~~llas~ 318 (344)
T 4gqb_B 292 -----LFR-SQAHRDFVRDATWSPLNHSLLTTV 318 (344)
T ss_dssp -----EEE-ECCCSSCEEEEEECSSSTTEEEEE
T ss_pred -----EEE-EcCCCCCEEEEEEeCCCCeEEEEE
Confidence 333 35899999999999999865 444
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=342.85 Aligned_cols=305 Identities=32% Similarity=0.523 Sum_probs=261.3
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC----------CCccceEEEeecCCcEEEecC
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG----------LPVETSLRQLVEDKNIRLWGK 72 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~w~~ 72 (479)
+++++.+|...|++++|+|++++|++++.|++|++||.. ++....+.. .+++..+++++.++.+++|+.
T Consensus 254 ~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~ 332 (577)
T 2ymu_A 254 LLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR 332 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 456788999999999999999999999999999999964 344333333 356778889999999999997
Q ss_pred CCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy14815 73 ESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 152 (479)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~ 152 (479)
.. . ......+|...|.+++|+|+++++++++.|+.|++||... + ....+.+|...|.+++|+|++++|+++
T Consensus 333 ~~--~----~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~-~--~~~~~~~~~~~v~~~~~s~dg~~l~~~ 403 (577)
T 2ymu_A 333 NG--Q----HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-Q--LLQTLTGHSSSVRGVAFSPDGQTIASA 403 (577)
T ss_dssp TS--C----EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTC-C--EEEEEECCSSCEEEEEECTTSSCEEEE
T ss_pred CC--C----eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCC-C--EEEEecCCCCCeEEEEECCCCCEEEEE
Confidence 63 1 1223468999999999999999999999999999999654 3 567788999999999999999999999
Q ss_pred eCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEE
Q psy14815 153 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLA 232 (479)
Q Consensus 153 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 232 (479)
+.|+.|++||... +....+..|...|++++|+|++++|++++.|+.|++||... ..+..+.+|...|++++
T Consensus 404 ~~d~~v~~~~~~~----~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~-----~~~~~~~~~~~~v~~~~ 474 (577)
T 2ymu_A 404 SDDKTVKLWNRNG----QLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG-----QLLQTLTGHSSSVRGVA 474 (577)
T ss_dssp ETTSEEEEECTTC----CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS-----CEEEEEECCSSCEEEEE
T ss_pred eCCCEEEEEeCCC----CEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC-----CEEEEEcCCCCCEEEEE
Confidence 9999999999643 45667889999999999999999999999999999999753 23667889999999999
Q ss_pred EccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 233 FDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 233 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
|+|++++|++++.|+.|++||.. .+++..+.+| ...|++++|+|++++|++++.||.|++||.
T Consensus 475 ~spd~~~las~~~d~~i~iw~~~----------------~~~~~~~~~h-~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 475 FSPDGQTIASASDDKTVKLWNRN----------------GQLLQTLTGH-SSSVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp ECTTSCEEEEEETTSEEEEEETT----------------SCEEEEEECC-SSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred EcCCCCEEEEEeCCCEEEEEcCC----------------CCEEEEEeCC-CCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 99999999999999999999952 2457788887 789999999999999999999999999996
Q ss_pred CCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 313 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
. ++ ++. .+.+|.++|++++|+||+++|++++
T Consensus 538 ~-~~---------~~~-~~~~h~~~v~~~~fs~dg~~l~s~~ 568 (577)
T 2ymu_A 538 N-GQ---------LLQ-TLTGHSSSVWGVAFSPDGQTIASAS 568 (577)
T ss_dssp T-SC---------EEE-EEECCSSCEEEEEECTTSSCEEEEE
T ss_pred C-CC---------EEE-EEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 4 33 233 3468999999999999999997654
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=320.05 Aligned_cols=295 Identities=22% Similarity=0.335 Sum_probs=233.6
Q ss_pred cccccccccccceEEEEE-----CC-CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCC
Q psy14815 2 INSQTLKGHQGRVWNVSW-----NP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESF 75 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~-----s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~ 75 (479)
.+..+|+||.+.|++++| ++ ++++|+||+.|++|++||+..++.....
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~-------------------------- 65 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYF-------------------------- 65 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBS--------------------------
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCccccc--------------------------
Confidence 356789999999999999 77 8999999999999999998654321110
Q ss_pred CCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy14815 76 GNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 155 (479)
Q Consensus 76 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d 155 (479)
........+|...|.+++|+|++.++++|+.|++|++||+++++ ....+.+|...|.+++|+|++++|++++.|
T Consensus 66 ----~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~--~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d 139 (343)
T 2xzm_R 66 ----GIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGT--TYKRFVGHQSEVYSVAFSPDNRQILSAGAE 139 (343)
T ss_dssp ----EEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSC--EEEEEECCCSCEEEEEECSSTTEEEEEETT
T ss_pred ----ccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc--EEEEEcCCCCcEEEEEECCCCCEEEEEcCC
Confidence 11122346899999999999999999999999999999999986 667888999999999999999999999999
Q ss_pred CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCC----------CEEEEEEcCCcEEEEecCCcccceEeeeeecCCC
Q psy14815 156 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD----------NILASASYDDTVKLFKEDKAEADWINFATLKSHT 225 (479)
Q Consensus 156 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~----------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 225 (479)
+.|++||+.... .........|...|.+++|+|++ .+|++++.||.|++||... .....+.+|.
T Consensus 140 ~~i~~wd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-----~~~~~~~~h~ 213 (343)
T 2xzm_R 140 REIKLWNILGEC-KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF-----QIRYTFKAHE 213 (343)
T ss_dssp SCEEEEESSSCE-EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT-----EEEEEEECCS
T ss_pred CEEEEEeccCCc-eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC-----ceeEEEcCcc
Confidence 999999998531 11222233688899999999986 7899999999999999542 3456778999
Q ss_pred ccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCC
Q psy14815 226 STVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD 305 (479)
Q Consensus 226 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg 305 (479)
..|.+++|+|++++|++|+.||.|++||+...... ...+.. ...|.+++|+|++++++++ .|+
T Consensus 214 ~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~--------------~~~~~~--~~~v~~v~~sp~~~~la~~-~d~ 276 (343)
T 2xzm_R 214 SNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYP--------------QREFDA--GSTINQIAFNPKLQWVAVG-TDQ 276 (343)
T ss_dssp SCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSC--------------SEEEEC--SSCEEEEEECSSSCEEEEE-ESS
T ss_pred ccceEEEECCCCCEEEEEcCCCeEEEEECCCCccc--------------ceeecC--CCcEEEEEECCCCCEEEEE-CCC
Confidence 99999999999999999999999999998543221 122222 4579999999999887655 588
Q ss_pred eEEEcccCCCCCCCCceeeEEE------eccccccccceeEEEecCCCCCCCccc
Q psy14815 306 AIRIFKENPEAGDSDMVSFDLV------HTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 306 ~i~vw~~~~~~~~~~~~~~~~~------~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.|++|++.+++... ...+. .....+|...|++++|+|++++|+.+.
T Consensus 277 ~v~iw~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~ 328 (343)
T 2xzm_R 277 GVKIFNLMTQSKAP---VCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGF 328 (343)
T ss_dssp CEEEEESSSCCSCS---EEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEE
T ss_pred CEEEEEeCCCCCCc---eEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEec
Confidence 89999998765211 00000 001136888999999999999997664
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-42 Score=317.74 Aligned_cols=248 Identities=22% Similarity=0.376 Sum_probs=225.1
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
..++.+|...|++++|++++.++++++.|++|++||+.+++.+..+
T Consensus 73 ~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~---------------------------------- 118 (321)
T 3ow8_A 73 QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSI---------------------------------- 118 (321)
T ss_dssp EEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE----------------------------------
T ss_pred eeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEE----------------------------------
Confidence 4568999999999999999999999999999999999877665443
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
..+...+.+++|+|++++|++|+.||.|++||+++++ ....+..|...|.+++|+|++++|++|+.||.|++||+
T Consensus 119 ---~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~--~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~ 193 (321)
T 3ow8_A 119 ---DAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGK--KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 193 (321)
T ss_dssp ---ECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCS--EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred ---eCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCc--eeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 3566788899999999999999999999999999987 56677888999999999999999999999999999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
+++ +.+..+.+|..+|++++|+|++++|++|+.|+.|++||++.+.. ...+.+|...|.+++|+|++++|+++
T Consensus 194 ~~~---~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~----~~~~~~h~~~v~~~~~sp~~~~l~s~ 266 (321)
T 3ow8_A 194 ATG---KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL----AGTLSGHASWVLNVAFCPDDTHFVSS 266 (321)
T ss_dssp TTT---EEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCC---cEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcce----eEEEcCCCCceEEEEECCCCCEEEEE
Confidence 987 66777889999999999999999999999999999999987653 67788999999999999999999999
Q ss_pred eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccC
Q psy14815 244 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 313 (479)
Q Consensus 244 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~ 313 (479)
+.|++|++||+. ..+++.++.+| ...|.+++|+|++++|++++.||.|++||..
T Consensus 267 s~D~~v~iwd~~---------------~~~~~~~~~~h-~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 267 SSDKSVKVWDVG---------------TRTCVHTFFDH-QDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp ETTSCEEEEETT---------------TTEEEEEECCC-SSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred eCCCcEEEEeCC---------------CCEEEEEEcCC-CCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 999999999984 33678888887 7899999999999999999999999999963
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=327.70 Aligned_cols=249 Identities=29% Similarity=0.550 Sum_probs=224.3
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
..+++++|.+.|++++|+|++++|++|+.||+|++||+.+++.+..+
T Consensus 142 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~--------------------------------- 188 (410)
T 1vyh_C 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM--------------------------------- 188 (410)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECC---------------------------------
T ss_pred EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEE---------------------------------
Confidence 46789999999999999999999999999999999999776655443
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd 162 (479)
.+|...|.+++|+|++++|++|+.|++|++||+++++ ++..+.+|...|.++.|+|++.+|++|+.||.|++||
T Consensus 189 ----~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~--~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd 262 (410)
T 1vyh_C 189 ----HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY--CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262 (410)
T ss_dssp ----CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ----cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--EEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 5788999999999999999999999999999999986 6778899999999999999999999999999999999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecC--------------------CCEEEEEEcCCcEEEEecCCcccceEeeeeec
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPF--------------------DNILASASYDDTVKLFKEDKAEADWINFATLK 222 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~--------------------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 222 (479)
+++. .....+..|...|.+++|+|+ +.+|++|+.|+.|++||++++. ++..+.
T Consensus 263 ~~~~---~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~----~~~~~~ 335 (410)
T 1vyh_C 263 VATK---ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM----CLMTLV 335 (410)
T ss_dssp TTTC---CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE----EEEEEE
T ss_pred CCCC---ceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc----eEEEEE
Confidence 9887 556678899999999999996 6789999999999999999765 467788
Q ss_pred CCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe
Q psy14815 223 SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 223 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~ 302 (479)
+|...|.+++|+|++++|++|+.|+.|++||+... +++..+.+| ...|++++|+|++.+|++|+
T Consensus 336 ~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~---------------~~~~~~~~h-~~~v~~l~~~~~~~~l~sgs 399 (410)
T 1vyh_C 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK---------------RCMKTLNAH-EHFVTSLDFHKTAPYVVTGS 399 (410)
T ss_dssp CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTS---------------CCCEEEECC-SSCEEEEEECSSSSCEEEEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---------------ceEEEEcCC-CCcEEEEEEcCCCCEEEEEe
Confidence 99999999999999999999999999999998543 335677776 78999999999999999999
Q ss_pred CCCeEEEcccC
Q psy14815 303 GDDAIRIFKEN 313 (479)
Q Consensus 303 ~dg~i~vw~~~ 313 (479)
.||+|++|+++
T Consensus 400 ~D~~i~vW~~r 410 (410)
T 1vyh_C 400 VDQTVKVWECR 410 (410)
T ss_dssp TTSEEEEEC--
T ss_pred CCCcEEEEeCC
Confidence 99999999863
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-41 Score=307.57 Aligned_cols=260 Identities=24% Similarity=0.437 Sum_probs=218.4
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccc--cccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIR--EPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
+..+.+|.+.|++++|+|+|++|+||+.|++|+|||+..+ +.+.
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~---------------------------------- 47 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLID---------------------------------- 47 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCE----------------------------------
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEE----------------------------------
Confidence 4568899999999999999999999999999999998642 2211
Q ss_pred eEEeccccCCcEEEEEECCC--CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCc
Q psy14815 82 KAILSDGHQRTIRETAWSPC--GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKS 157 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~ 157 (479)
.+.+|..+|.+++|+++ +++|++|+.|++|++||+++++......+..|...|.+++|+|+ +.+|++++.||.
T Consensus 48 ---~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~ 124 (297)
T 2pm7_B 48 ---TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGK 124 (297)
T ss_dssp ---EECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSE
T ss_pred ---EEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCc
Confidence 12689999999999874 89999999999999999998765566778889999999999997 889999999999
Q ss_pred EEEEEeCCCCceeeeeeeeccccceeEEEEecC-------------CCEEEEEEcCCcEEEEecCCcccceEeeeeecCC
Q psy14815 158 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF-------------DNILASASYDDTVKLFKEDKAEADWINFATLKSH 224 (479)
Q Consensus 158 i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~-------------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 224 (479)
|++||++..... ....+..|...|.+++|+|+ +++|++|+.|++|++||++++...+.....+.+|
T Consensus 125 v~~wd~~~~~~~-~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H 203 (297)
T 2pm7_B 125 VSVVEFKENGTT-SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 203 (297)
T ss_dssp EEEEEBCSSSCB-CCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred EEEEEecCCCce-eeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC
Confidence 999999876322 23457789999999999996 5799999999999999998766544566788999
Q ss_pred CccEEEEEEccCC---CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEE--eccccccEEEEEecCCCCeEE
Q psy14815 225 TSTVWSLAFDRIG---SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL--SGHHGRTIYDISWCHLTDLIA 299 (479)
Q Consensus 225 ~~~v~~~~~~~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~l~~~~~~~~l~ 299 (479)
...|.+++|+|++ ++|++++.|++|++||++..... +. ...+ .. +...|.+++|+|++++|+
T Consensus 204 ~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~-----------~~-~~~~~~~~-~~~~v~~~~~s~~g~~la 270 (297)
T 2pm7_B 204 SDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGP-----------WK-KTLLKEEK-FPDVLWRASWSLSGNVLA 270 (297)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC-----------CE-EEESSSSC-CSSCEEEEEECSSSCCEE
T ss_pred CCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCc-----------cc-eeeeeccc-CCCcEEEEEECCCCCEEE
Confidence 9999999999984 89999999999999998653211 01 1122 23 367899999999999999
Q ss_pred EEeCCCeEEEcccCC
Q psy14815 300 TACGDDAIRIFKENP 314 (479)
Q Consensus 300 ~~~~dg~i~vw~~~~ 314 (479)
+++.||.|++|+...
T Consensus 271 s~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 271 LSGGDNKVTLWKENL 285 (297)
T ss_dssp EEETTSCEEEEEECT
T ss_pred EEcCCCcEEEEEECC
Confidence 999999999999864
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=334.10 Aligned_cols=305 Identities=31% Similarity=0.528 Sum_probs=260.7
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC----------CCccceEEEeecCCcEEEecC
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG----------LPVETSLRQLVEDKNIRLWGK 72 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~w~~ 72 (479)
.++++.+|...|++++|+|++++|++++.|+.|++||.. ++.+..+.. .+++..+++++.++.+++|+.
T Consensus 213 ~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~ 291 (577)
T 2ymu_A 213 LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNR 291 (577)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC-CCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeC
Confidence 456788999999999999999999999999999999964 444444333 356778888999999999997
Q ss_pred CCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy14815 73 ESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 152 (479)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~ 152 (479)
.. . ......+|...|.+++|+|+++++++++.|+.|++||.... ....+.+|...+.+++|+|++++++++
T Consensus 292 ~~--~----~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~---~~~~~~~~~~~v~~~~~s~~g~~l~~~ 362 (577)
T 2ymu_A 292 NG--Q----LLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ---HLQTLTGHSSSVWGVAFSPDGQTIASA 362 (577)
T ss_dssp TS--C----EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC---EEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CC--c----EEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC---eeEEEeCCCCCEEEEEECCCCCEEEEE
Confidence 52 1 12234689999999999999999999999999999998766 356778899999999999999999999
Q ss_pred eCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEE
Q psy14815 153 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLA 232 (479)
Q Consensus 153 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 232 (479)
+.||.+++||... +.+..+..|...|++++|+|++++|++++.|+.|++||... ..+..+.+|...|++++
T Consensus 363 ~~dg~v~~~~~~~----~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~-----~~~~~~~~~~~~v~~~~ 433 (577)
T 2ymu_A 363 SDDKTVKLWNRNG----QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG-----QLLQTLTGHSSSVWGVA 433 (577)
T ss_dssp ETTSEEEEEETTC----CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTC-----CEEEEEECCSSCEEEEE
T ss_pred eCCCEEEEEcCCC----CEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC-----CEEEEecCCCCCeEEEE
Confidence 9999999999643 45667888999999999999999999999999999999643 23667889999999999
Q ss_pred EccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 233 FDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 233 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
|+|++++|++++.|+.|++||.. .+.+..+.+| ...|++++|+|++++|++++.|+.|++|+.
T Consensus 434 ~s~d~~~l~~~~~d~~v~~w~~~----------------~~~~~~~~~~-~~~v~~~~~spd~~~las~~~d~~i~iw~~ 496 (577)
T 2ymu_A 434 FSPDDQTIASASDDKTVKLWNRN----------------GQLLQTLTGH-SSSVRGVAFSPDGQTIASASDDKTVKLWNR 496 (577)
T ss_dssp ECTTSSEEEEEETTSEEEEEETT----------------SCEEEEEECC-SSCEEEEEECTTSCEEEEEETTSEEEEEET
T ss_pred ECCCCCEEEEEcCCCEEEEEECC----------------CCEEEEEcCC-CCCEEEEEEcCCCCEEEEEeCCCEEEEEcC
Confidence 99999999999999999999952 1446777786 789999999999999999999999999996
Q ss_pred CCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 313 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
. ++ ++. .+.+|...|++++|+|++++|+.+.
T Consensus 497 ~-~~---------~~~-~~~~h~~~v~~l~~s~dg~~l~s~~ 527 (577)
T 2ymu_A 497 N-GQ---------LLQ-TLTGHSSSVRGVAFSPDGQTIASAS 527 (577)
T ss_dssp T-SC---------EEE-EEECCSSCEEEEEECTTSSCEEEEE
T ss_pred C-CC---------EEE-EEeCCCCCEEEEEEcCCCCEEEEEE
Confidence 4 33 233 3468999999999999999997764
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-41 Score=319.83 Aligned_cols=298 Identities=20% Similarity=0.308 Sum_probs=229.3
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
+|.+.|++++|+|+|++|++|+ ++++++|++.+++.+..+..+.... .+. ..........
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~-------------~~~------~~~~~~~~~~ 121 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAAN-------------KDP------ENLNTSSSPS 121 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC------------------------------------C
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccc-------------ccc------ccccccccCC
Confidence 6999999999999999999987 6899999999888766554321100 000 0000011123
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 168 (479)
+...|.+++|+|++++|++|+.|+.|++||+.+++ ....+.+|...|.+++|+|++++|++++.|+.|++||++++
T Consensus 122 ~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~-- 197 (393)
T 1erj_A 122 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRK--IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG-- 197 (393)
T ss_dssp CCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--
T ss_pred CceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCc--EEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCC--
Confidence 45579999999999999999999999999999986 66788999999999999999999999999999999999987
Q ss_pred eeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEe---eeeecCCCccEEEEEEccCCCEEEEee
Q psy14815 169 YECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWIN---FATLKSHTSTVWSLAFDRIGSRLATCS 244 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~s~~ 244 (479)
+....+. +...+.+++|+| ++++|++|+.||.|++||++++...... .....+|...|.+++|+|++++|++|+
T Consensus 198 -~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s 275 (393)
T 1erj_A 198 -QCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS 275 (393)
T ss_dssp -EEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEE
T ss_pred -eeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEe
Confidence 3333333 556799999999 8999999999999999999876531111 011257999999999999999999999
Q ss_pred CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceee
Q psy14815 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSF 324 (479)
Q Consensus 245 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~ 324 (479)
.|+.|++||++.......... .....+...+.+| ...|.+++|+|++++|++|+.|+.|++||..+++
T Consensus 276 ~d~~v~~wd~~~~~~~~~~~~---~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~-------- 343 (393)
T 1erj_A 276 LDRSVKLWNLQNANNKSDSKT---PNSGTCEVTYIGH-KDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN-------- 343 (393)
T ss_dssp TTSEEEEEEC------------------CEEEEEECC-SSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC--------
T ss_pred CCCEEEEEECCCCCCcccccC---CCCCcceEEEecc-cCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCe--------
Confidence 999999999976543221111 1223456677787 7799999999999999999999999999999887
Q ss_pred EEEeccccccccceeEEEecCC
Q psy14815 325 DLVHTEHRAHNQDVNCVAWNPV 346 (479)
Q Consensus 325 ~~~~~~~~~h~~~v~~~~~sp~ 346 (479)
....+.+|...|.+++|+|+
T Consensus 344 --~~~~l~~h~~~v~~v~~~~~ 363 (393)
T 1erj_A 344 --PLLMLQGHRNSVISVAVANG 363 (393)
T ss_dssp --EEEEEECCSSCEEEEEECSS
T ss_pred --EEEEECCCCCCEEEEEecCC
Confidence 33445689999999999874
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-40 Score=308.90 Aligned_cols=250 Identities=18% Similarity=0.253 Sum_probs=207.1
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
.|...|++++|+|++ .|++|+.||+|+|||+.+++.+... .....+
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~---------------------------------~~~~~~ 125 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVS---------------------------------KFCKYE 125 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEE---------------------------------EEEEEC
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEe---------------------------------eccccC
Confidence 356789999999985 7889999999999999877654332 122358
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEEeCCCC
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ-FLATCSRDKSVWVWEVGEED 167 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~vwd~~~~~ 167 (479)
|...|++++|+|++++|++|+.|++|++||+++++ .+..+.+|...|.+++|++++. +|++++.||.|++||+++.+
T Consensus 126 H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~--~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~ 203 (344)
T 4gqb_B 126 HDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQV--VLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK 203 (344)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSS
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc--EEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccc
Confidence 99999999999999999999999999999999996 6788999999999999999874 78999999999999999874
Q ss_pred ceeeeeeeeccccceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC-CEEEEeeC
Q psy14815 168 EYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SRLATCSD 245 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~ 245 (479)
....+ ....+...+.+++|+|+ +++|++|+.||.|++||+++++. +..+.+|...|++++|+|++ ++|++|+.
T Consensus 204 ~~~~~-~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~----~~~~~~h~~~v~~v~fsp~g~~~lasgs~ 278 (344)
T 4gqb_B 204 PASQI-GCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSC----VLSSAVHSQCVTGLVFSPHSVPFLASLSE 278 (344)
T ss_dssp CEEEC-C----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--C----CEEEECCSSCEEEEEECSSSSCCEEEEET
T ss_pred eeeee-ecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcE----EEEEcCCCCCEEEEEEccCCCeEEEEEeC
Confidence 33222 22345667899999994 57889999999999999997664 77889999999999999998 57899999
Q ss_pred CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC-eEEEEeCCCeEEEcccCCCC
Q psy14815 246 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 246 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~~dg~i~vw~~~~~~ 316 (479)
|++|++||+... + +..+.+| ...|++++|+|+++ +|++++.|++|++|++.+..
T Consensus 279 D~~i~vwd~~~~---------------~-~~~~~~H-~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 279 DCSLAVLDSSLS---------------E-LFRSQAH-RDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp TSCEEEECTTCC---------------E-EEEECCC-SSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred CCeEEEEECCCC---------------c-EEEEcCC-CCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 999999997432 2 3456776 88999999999986 56789999999999998764
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=309.81 Aligned_cols=263 Identities=24% Similarity=0.464 Sum_probs=212.2
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
...+.+|.+.|++++|+|+|++|++|+.|++|+|||+.++... ..
T Consensus 6 ~~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~-----------------------------------~~ 50 (316)
T 3bg1_A 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQI-----------------------------------LI 50 (316)
T ss_dssp --------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEE-----------------------------------EE
T ss_pred eeecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcE-----------------------------------EE
Confidence 3456799999999999999999999999999999998654321 01
Q ss_pred EeccccCCcEEEEEECC--CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCcEE
Q psy14815 84 ILSDGHQRTIRETAWSP--CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVW 159 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~--~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~ 159 (479)
..+.+|...|.+++|++ ++++|++|+.|++|++||+++++......+.+|...|.+++|+|+ +.+|++|+.||.|+
T Consensus 51 ~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~ 130 (316)
T 3bg1_A 51 ADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAIS 130 (316)
T ss_dssp EEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEE
T ss_pred EEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEE
Confidence 11358999999999986 489999999999999999998765566778899999999999997 78999999999999
Q ss_pred EEEeCCCCceeeeeeeeccccceeEEEEecC-----------------CCEEEEEEcCCcEEEEecCCcccceEeeeeec
Q psy14815 160 VWEVGEEDEYECAAVINAHIQDVKKVRFHPF-----------------DNILASASYDDTVKLFKEDKAEADWINFATLK 222 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~-----------------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 222 (479)
+||++..........+..|...+.+++|+|+ +++|++|+.|+.|++||++... .+.....+.
T Consensus 131 lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~-~~~~~~~l~ 209 (316)
T 3bg1_A 131 LLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDG-QWKEEQKLE 209 (316)
T ss_dssp EEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTS-CEEEEECCB
T ss_pred EEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCC-ccceeeecc
Confidence 9999876544445567789999999999997 4689999999999999997543 234567788
Q ss_pred CCCccEEEEEEccCC----CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeE
Q psy14815 223 SHTSTVWSLAFDRIG----SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI 298 (479)
Q Consensus 223 ~~~~~v~~~~~~~~~----~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l 298 (479)
+|...|.+++|+|++ ++|++++.|++|++|++....... .. ...+..| ...|.+++|+|++++|
T Consensus 210 ~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~--------~~---~~~~~~~-~~~v~~v~~sp~g~~l 277 (316)
T 3bg1_A 210 AHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNT--------WS---PKLLHKF-NDVVWHVSWSITANIL 277 (316)
T ss_dssp CCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCC--------CB---CCEEEEC-SSCEEEEEECTTTCCE
T ss_pred cCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccc--------hh---hhhhhcC-CCcEEEEEEcCCCCEE
Confidence 999999999999986 789999999999999986532110 00 1123344 7799999999999999
Q ss_pred EEEeCCCeEEEcccCC
Q psy14815 299 ATACGDDAIRIFKENP 314 (479)
Q Consensus 299 ~~~~~dg~i~vw~~~~ 314 (479)
++++.|+.|++|+...
T Consensus 278 as~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 278 AVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEESSSCEEEEEECT
T ss_pred EEEcCCCeEEEEEECC
Confidence 9999999999999764
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-39 Score=301.76 Aligned_cols=294 Identities=24% Similarity=0.346 Sum_probs=236.5
Q ss_pred cccccccccccceEEEEECCC-CCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQ-GTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~-~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
.+..+|+||++.|++|+|+|+ +++|+|||.||+|+|||+.+.+....
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~-------------------------------- 76 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYG-------------------------------- 76 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSE--------------------------------
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccc--------------------------------
Confidence 345689999999999999997 68999999999999999876543211
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
.......+|...|.+++|+|++++|++++.|+.|++|+..... .......+...+..+.+++++.+|++++.|+.+++
T Consensus 77 ~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~ 154 (340)
T 4aow_A 77 IPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGT--TTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKL 154 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEE
T ss_pred eeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccc--eeeeecCCCCceeEEEEeecCccceeecCCCeEEE
Confidence 1122246899999999999999999999999999999999886 45666678888999999999999999999999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCC--CEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCC
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFD--NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS 238 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 238 (479)
||+.... ........|...+.+++|++++ .++++++.|+.|++||+++.. ....+.+|...|++++|+|+++
T Consensus 155 ~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~----~~~~~~~h~~~v~~~~~s~~~~ 228 (340)
T 4aow_A 155 WNTLGVC--KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK----LKTNHIGHTGYLNTVTVSPDGS 228 (340)
T ss_dssp ECTTSCE--EEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEECTTSS
T ss_pred EEeCCCc--eEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCc----eeeEecCCCCcEEEEEECCCCC
Confidence 9987653 3344567888999999998864 578899999999999999765 3677889999999999999999
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCC
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 318 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 318 (479)
+|++|+.||.|++||++.. +++..+.. ...|.+++|+|++.+ ++++.|+.|++||++.+...
T Consensus 229 ~l~s~s~Dg~i~iwd~~~~---------------~~~~~~~~--~~~v~~~~~~~~~~~-~~~~~d~~i~iwd~~~~~~~ 290 (340)
T 4aow_A 229 LCASGGKDGQAMLWDLNEG---------------KHLYTLDG--GDIINALCFSPNRYW-LCAATGPSIKIWDLEGKIIV 290 (340)
T ss_dssp EEEEEETTCEEEEEETTTT---------------EEEEEEEC--SSCEEEEEECSSSSE-EEEEETTEEEEEETTTTEEE
T ss_pred EEEEEeCCCeEEEEEeccC---------------ceeeeecC--CceEEeeecCCCCce-eeccCCCEEEEEECCCCeEE
Confidence 9999999999999998433 55666665 458999999998755 55667999999999876410
Q ss_pred CCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 319 SDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 319 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.. ...........+|...|++++|+|++++|+.++
T Consensus 291 ~~-~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs 325 (340)
T 4aow_A 291 DE-LKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY 325 (340)
T ss_dssp EE-ECCC-------CCCCCEEEEEECTTSSEEEEEE
T ss_pred Ee-ccccceeeeccCCCCCEEEEEECCCCCEEEEEe
Confidence 00 000011222357889999999999999997664
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-40 Score=316.31 Aligned_cols=308 Identities=15% Similarity=0.203 Sum_probs=247.0
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC---------CCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG---------LPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
..+++++|+|++++|++++.||.|++||+.+++....+.. .+++..+++++.++.+++|++... ..
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-----~~ 131 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN-----LQ 131 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSC-----EE
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCc-----ce
Confidence 3455899999999999999999999999988776655443 255678888999999999998731 12
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd 162 (479)
.....+|...|++++|+|++++|++|+.|+.|++||+.+++ ....+.+|...|.+++|+|++++|++++.||.|++||
T Consensus 132 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd 209 (420)
T 3vl1_A 132 REIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGS--NPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWE 209 (420)
T ss_dssp EEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--CCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred eeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc--CceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeE
Confidence 23346899999999999999999999999999999999886 5677889999999999999999999999999999999
Q ss_pred eCCCCceeeeeeee---ccc---------------------cceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEee
Q psy14815 163 VGEEDEYECAAVIN---AHI---------------------QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 218 (479)
Q Consensus 163 ~~~~~~~~~~~~~~---~~~---------------------~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 218 (479)
+++++ ....+. .+. ..+.+++|+|++++|++|+.||.|++||++++.. ..
T Consensus 210 ~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~---~~ 283 (420)
T 3vl1_A 210 CGTGT---TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQ---TI 283 (420)
T ss_dssp TTTTE---EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCE---EE
T ss_pred CCCCc---eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCce---eE
Confidence 99874 333343 233 3444555678999999999999999999997663 23
Q ss_pred eeecCCCccEEEEEEccCCC-EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCe
Q psy14815 219 ATLKSHTSTVWSLAFDRIGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDL 297 (479)
Q Consensus 219 ~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~ 297 (479)
.....|...|.+++|+|+++ +|++++.||.|++||++.... ++..+..|+...|.++.| +++++
T Consensus 284 ~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~--------------~~~~~~~~~~~~v~~~~~-~~~~~ 348 (420)
T 3vl1_A 284 QLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC--------------PVGEFLINEGTPINNVYF-AAGAL 348 (420)
T ss_dssp EECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS--------------CSEEEEESTTSCEEEEEE-ETTEE
T ss_pred EcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC--------------chhhhhccCCCCceEEEe-CCCCE
Confidence 33456889999999999998 999999999999999976543 135666766888999965 57889
Q ss_pred EEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCC
Q psy14815 298 IATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP 348 (479)
Q Consensus 298 l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~ 348 (479)
|++++.||.|++|++............... .....|...|.+++|+|+++
T Consensus 349 l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~ 398 (420)
T 3vl1_A 349 FVSSGFDTSIKLDIISDPESERPAIEFETP-TFLVSNDDAVSQFCYVSDDE 398 (420)
T ss_dssp EEEETTTEEEEEEEECCTTCCSCEECTTSC-EEECCSSCCCCEEEEECCSS
T ss_pred EEEecCCccEEEEeccCCCCCccceeccCc-cEEccCCcceEEEEEccCCC
Confidence 999999999999999875432211111001 11346888999999999998
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-39 Score=301.38 Aligned_cols=266 Identities=26% Similarity=0.517 Sum_probs=217.4
Q ss_pred ccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 7 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
..+|.+.|++++|+|++++|++|+.|++|++||+..+... .....
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~-----------------------------------~~~~~ 101 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFE-----------------------------------CVTTL 101 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EE-----------------------------------EEEEE
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeE-----------------------------------EEEEc
Confidence 3689999999999999999999999999999997643210 11123
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCe-EEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCC
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ-FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~ 165 (479)
.+|...|.+++|+|++++|++|+.|++|++||+.++. ......+.+|...|.+++|+|++++|++|+.|+.|++||.+.
T Consensus 102 ~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~ 181 (345)
T 3fm0_A 102 EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEE 181 (345)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEET
T ss_pred cCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecC
Confidence 6899999999999999999999999999999998753 345677889999999999999999999999999999999987
Q ss_pred CCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcc-----------cceEeeeeecC-CCccEEEEEE
Q psy14815 166 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE-----------ADWINFATLKS-HTSTVWSLAF 233 (479)
Q Consensus 166 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~-----------~~~~~~~~~~~-~~~~v~~~~~ 233 (479)
.. ..+...+.+|...|++++|+|++++|++|+.|++|++||..... ..+.++..+.+ |...|.+++|
T Consensus 182 ~~-~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 260 (345)
T 3fm0_A 182 DD-WVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAW 260 (345)
T ss_dssp TE-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEE
T ss_pred CC-EEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEE
Confidence 53 23456788999999999999999999999999999999974322 12233445554 8899999999
Q ss_pred ccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEE-EeccccccEEEEEecCCCC-eEEEEeCCCeEEEcc
Q psy14815 234 DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT-LSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFK 311 (479)
Q Consensus 234 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~l~~~~~~~-~l~~~~~dg~i~vw~ 311 (479)
+|++..|++++.|+.|++|+......... ........ ..+| ...|++++|+|++. +|++|+.||+|++|+
T Consensus 261 ~~~~~~l~s~~~d~~i~vw~~~~~~~~~~-------~~~~~~~~~~~~h-~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~ 332 (345)
T 3fm0_A 261 CQLTGALATACGDDAIRVFQEDPNSDPQQ-------PTFSLTAHLHQAH-SQDVNCVAWNPKEPGLLASCSDDGEVAFWK 332 (345)
T ss_dssp CTTTCCEEEEETTSCEEEEEECTTSCTTS-------CCEEEEEEETTSS-SSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred ecCCCEEEEEeCCCeEEEEEeCCCCCcce-------eeEEEEeeecccc-cCcEeEeEEeCCCceEEEEcCCCCcEEEEE
Confidence 99999999999999999999865432211 12222222 3354 88999999999974 999999999999999
Q ss_pred cCCCC
Q psy14815 312 ENPEA 316 (479)
Q Consensus 312 ~~~~~ 316 (479)
+..++
T Consensus 333 ~~~~~ 337 (345)
T 3fm0_A 333 YQRPE 337 (345)
T ss_dssp ECC--
T ss_pred ecCCC
Confidence 98876
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-39 Score=297.70 Aligned_cols=249 Identities=24% Similarity=0.358 Sum_probs=213.4
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
++++|++|...|++++|+|++++|++|+.|++|++||+.+++.+..+
T Consensus 57 ~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~--------------------------------- 103 (319)
T 3frx_A 57 PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRF--------------------------------- 103 (319)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE---------------------------------
T ss_pred cceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEE---------------------------------
Confidence 35688999999999999999999999999999999999877655443
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC------CCEEEEEeCCC
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN------GQFLATCSRDK 156 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~------~~~l~~~~~dg 156 (479)
.+|...|.+++|+|++.+|++|+.|++|++||++.. ....+.+|...|.++.|+|. +..+++++.|+
T Consensus 104 ----~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~---~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~ 176 (319)
T 3frx_A 104 ----VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ---CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDK 176 (319)
T ss_dssp ----ECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC---EEEEECCCSSCEEEEEECCC------CCEEEEEETTS
T ss_pred ----ccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCC
Confidence 578999999999999999999999999999999765 56778899999999999984 44899999999
Q ss_pred cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC
Q psy14815 157 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 236 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 236 (479)
.|++||++.. .....+.+|...|++++|+|++++|++|+.||.|++||+++.+. +..+.. ...|.+++|+|+
T Consensus 177 ~i~~wd~~~~---~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~----~~~~~~-~~~v~~~~~sp~ 248 (319)
T 3frx_A 177 MVKAWNLNQF---QIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKA----MYTLSA-QDEVFSLAFSPN 248 (319)
T ss_dssp CEEEEETTTT---EEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEE----EEEEEC-CSCEEEEEECSS
T ss_pred EEEEEECCcc---hhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE----EEEecC-CCcEEEEEEcCC
Confidence 9999999886 56667889999999999999999999999999999999997653 455554 468999999999
Q ss_pred CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEec-------cccccEEEEEecCCCCeEEEEeCCCeEEE
Q psy14815 237 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-------HHGRTIYDISWCHLTDLIATACGDDAIRI 309 (479)
Q Consensus 237 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~l~~~~~~~~l~~~~~dg~i~v 309 (479)
+.+|++++.+ .+++|++... ..+..+.. .+...+.+++|+|+|++|++|+.||.|++
T Consensus 249 ~~~la~~~~~-~i~v~~~~~~---------------~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~v 312 (319)
T 3frx_A 249 RYWLAAATAT-GIKVFSLDPQ---------------YLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRV 312 (319)
T ss_dssp SSEEEEEETT-EEEEEEETTE---------------EEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCEEEEEcCC-CcEEEEeCcC---------------eeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEE
Confidence 9999888755 5999998432 22333322 13567899999999999999999999999
Q ss_pred cccCCC
Q psy14815 310 FKENPE 315 (479)
Q Consensus 310 w~~~~~ 315 (479)
||+.+.
T Consensus 313 Wd~~t~ 318 (319)
T 3frx_A 313 WQVMTA 318 (319)
T ss_dssp EEEEEC
T ss_pred EEEeec
Confidence 998764
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-39 Score=311.52 Aligned_cols=316 Identities=18% Similarity=0.273 Sum_probs=252.4
Q ss_pred ccccc--cccceEEEEECCCCC-eEEEeeCCCcEEEEec----ccccc------cc--------------------cccC
Q psy14815 5 QTLKG--HQGRVWNVSWNPQGT-MISSCGEDKNIRLWVM----VIREP------YE--------------------KLHG 51 (479)
Q Consensus 5 ~~l~~--h~~~V~~l~~s~~~~-~l~t~~~dg~v~iwd~----~~~~~------~~--------------------~~~~ 51 (479)
+.+.. |.+.|++++|+|+++ +|++|+.||.|++||+ .+++. .. .+..
T Consensus 37 ~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (425)
T 1r5m_A 37 KILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAW 116 (425)
T ss_dssp EECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEE
T ss_pred hheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEE
Confidence 34444 559999999999999 9999999999999999 77762 22 2222
Q ss_pred CCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe
Q psy14815 52 LPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE 131 (479)
Q Consensus 52 ~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~ 131 (479)
.+++..+++++.++.+++|+.. +. .......|...|.+++|+|++++|++++.|+.|++||+.+++ ....+.
T Consensus 117 s~~~~~l~~~~~dg~i~i~~~~--~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~ 188 (425)
T 1r5m_A 117 SHDGNSIVTGVENGELRLWNKT--GA----LLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGT--VMQHFE 188 (425)
T ss_dssp CTTSSEEEEEETTSCEEEEETT--SC----EEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTE--EEEEEC
T ss_pred cCCCCEEEEEeCCCeEEEEeCC--CC----eeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCc--EEEEee
Confidence 3567788899999999999943 21 222346799999999999999999999999999999999986 556666
Q ss_pred CCCCc---------------EEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEE
Q psy14815 132 GHENE---------------VKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 196 (479)
Q Consensus 132 ~~~~~---------------v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~ 196 (479)
.+... +.++.|++++ .+++++.+|.|++||++.. .....+..|...|.+++|+|++++|++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~ 264 (425)
T 1r5m_A 189 LKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEK---TPTGKLIGHHGPISVLEFNDTNKLLLS 264 (425)
T ss_dssp CC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCS---SCSEEECCCSSCEEEEEEETTTTEEEE
T ss_pred ccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCC---ceeeeeccCCCceEEEEECCCCCEEEE
Confidence 66666 9999999875 5889999999999999987 455667789999999999999999999
Q ss_pred EEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEE
Q psy14815 197 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 276 (479)
Q Consensus 197 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 276 (479)
++.||.|++||++.+.. ...+..|...|.+++|+|++ ++++++.|+.|++||++. .+++.
T Consensus 265 ~~~d~~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~---------------~~~~~ 324 (425)
T 1r5m_A 265 ASDDGTLRIWHGGNGNS----QNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQ---------------NTLLA 324 (425)
T ss_dssp EETTSCEEEECSSSBSC----SEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTT---------------TEEEE
T ss_pred EcCCCEEEEEECCCCcc----ceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCC---------------CcEeE
Confidence 99999999999997654 56677899999999999999 999999999999999843 35677
Q ss_pred EEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCC-----------CceeeEEEecccccccc--ceeEEEe
Q psy14815 277 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS-----------DMVSFDLVHTEHRAHNQ--DVNCVAW 343 (479)
Q Consensus 277 ~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~-----------~~~~~~~~~~~~~~h~~--~v~~~~~ 343 (479)
.+..| ..+|.+++|+|++++|++++.||.|++||+...+... ......++. ....|.. .|++++|
T Consensus 325 ~~~~~-~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~ 402 (425)
T 1r5m_A 325 LSIVD-GVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYA-SYQSSQDNDYIFDLSW 402 (425)
T ss_dssp EEECT-TCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEE-EECCTTCCCCEEEEEE
T ss_pred ecccC-CccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhh-hhcCcccCCceEEEEc
Confidence 77776 7799999999999999999999999999998654100 000011233 3356765 9999999
Q ss_pred cCCCCCCCccc
Q psy14815 344 NPVVPEPQKTN 354 (479)
Q Consensus 344 sp~~~~l~~~~ 354 (479)
+|++++|+.+.
T Consensus 403 s~~~~~l~~~~ 413 (425)
T 1r5m_A 403 NCAGNKISVAY 413 (425)
T ss_dssp CTTSSEEEEEE
T ss_pred cCCCceEEEEe
Confidence 99999886554
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=297.34 Aligned_cols=308 Identities=13% Similarity=0.147 Sum_probs=254.0
Q ss_pred cccceEEEEECCCCCeEEEeeCCCcEEEEecccc----------cccccccCCCccceEEEeecCCcEEEecCCCCCCce
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIR----------EPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKF 79 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~----------~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~ 79 (479)
|.++|.+++|+|||++++++..++.+.+|+.... ..+..+...+++..+++++ ++.+++|++.......
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~ 86 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKS 86 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCS
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCcee
Confidence 5678999999999999999887776666654332 2233333346666777777 9999999998654433
Q ss_pred eeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy14815 80 TAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 159 (479)
Q Consensus 80 ~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~ 159 (479)
........+|...|.+++|+|++++|++++.|+.|++||+.+++......+..|...|.+++|+|+++++++++.||.|+
T Consensus 87 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~ 166 (337)
T 1gxr_A 87 PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 166 (337)
T ss_dssp CSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEE
Confidence 33333344789999999999999999999999999999999987666778888999999999999999999999999999
Q ss_pred EEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE
Q psy14815 160 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
+||+++. +....+..|...+.+++|+|++++|++++.||.|++||+++++. ...+ .+...+.+++|+|++++
T Consensus 167 ~~d~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~----~~~~-~~~~~v~~~~~s~~~~~ 238 (337)
T 1gxr_A 167 VWDLHNQ---TLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ----LQQH-DFTSQIFSLGYCPTGEW 238 (337)
T ss_dssp EEETTTT---EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE----EEEE-ECSSCEEEEEECTTSSE
T ss_pred EEeCCCC---ceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCce----Eeee-cCCCceEEEEECCCCCE
Confidence 9999987 56667788999999999999999999999999999999997653 3333 47788999999999999
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCC
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS 319 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 319 (479)
+++++.|+.|++||+.... ...+..| ...|.+++|+|++++|++++.||.|++|++.+++
T Consensus 239 l~~~~~~~~i~~~~~~~~~----------------~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~--- 298 (337)
T 1gxr_A 239 LAVGMESSNVEVLHVNKPD----------------KYQLHLH-ESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA--- 298 (337)
T ss_dssp EEEEETTSCEEEEETTSSC----------------EEEECCC-SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC---
T ss_pred EEEEcCCCcEEEEECCCCC----------------eEEEcCC-ccceeEEEECCCCCEEEEecCCCcEEEEECCCCe---
Confidence 9999999999999985432 2345555 7899999999999999999999999999999887
Q ss_pred CceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 320 DMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 320 ~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.... ..|...|.+++|+|++++|+.+.
T Consensus 299 ------~~~~--~~~~~~v~~~~~s~~~~~l~~~~ 325 (337)
T 1gxr_A 299 ------SIFQ--SKESSSVLSCDISVDDKYIVTGS 325 (337)
T ss_dssp ------EEEE--EECSSCEEEEEECTTSCEEEEEE
T ss_pred ------EEEE--ecCCCcEEEEEECCCCCEEEEec
Confidence 2322 35788999999999999886553
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=300.57 Aligned_cols=282 Identities=18% Similarity=0.264 Sum_probs=241.5
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
...+|.+|.+.|++++|+|++++|++++.||.|++||+.+++.+..+
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~--------------------------------- 70 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTL--------------------------------- 70 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEE---------------------------------
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhh---------------------------------
Confidence 35678999999999999999999999999999999999877655443
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-----Cc
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KS 157 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~ 157 (479)
.+|...|.+++|+|++++|++++.||.|++||+.+++ ....+. +...+.+++|+|+++++++++.+ |.
T Consensus 71 ----~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~ 143 (369)
T 3zwl_B 71 ----DGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQ--CVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGS 143 (369)
T ss_dssp ----CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC--EEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCE
T ss_pred ----hhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--EEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCE
Confidence 4789999999999999999999999999999999987 445555 78899999999999999999999 99
Q ss_pred EEEEEeCCCCcee--------eeeeeecccc--ceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCcc
Q psy14815 158 VWVWEVGEEDEYE--------CAAVINAHIQ--DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST 227 (479)
Q Consensus 158 i~vwd~~~~~~~~--------~~~~~~~~~~--~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 227 (479)
|++||++...... ....+..|.. .+.+++|+|++++|++++.||.|++||+++.. .....+..|...
T Consensus 144 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~ 220 (369)
T 3zwl_B 144 INIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNY---EYVDSIDLHEKS 220 (369)
T ss_dssp EEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTT---EEEEEEECCSSC
T ss_pred EEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCc---EeEEEEecCCCc
Confidence 9999998764211 2233445555 89999999999999999999999999998733 346778889999
Q ss_pred EEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCC--
Q psy14815 228 VWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD-- 305 (479)
Q Consensus 228 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg-- 305 (479)
|.+++|+|++++|++++.|+.|++||++.. +.+..+. +...+.+++|+|+++++++++.++
T Consensus 221 v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~---------------~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~ 283 (369)
T 3zwl_B 221 ISDMQFSPDLTYFITSSRDTNSFLVDVSTL---------------QVLKKYE--TDCPLNTAVITPLKEFIILGGGQEAK 283 (369)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTC---------------CEEEEEE--CSSCEEEEEECSSSSEEEEEECCC--
T ss_pred eeEEEECCCCCEEEEecCCceEEEEECCCC---------------ceeeeec--CCCCceeEEecCCCceEEEeecCCCc
Confidence 999999999999999999999999998543 3455555 267899999999999999999988
Q ss_pred ------------eEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 306 ------------AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 306 ------------~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.+++||..+++ ......+|...|++++|+|++++|+.+.
T Consensus 284 ~~~~~~~~~~~~~i~~~d~~~~~----------~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 334 (369)
T 3zwl_B 284 DVTTTSANEGKFEARFYHKIFEE----------EIGRVQGHFGPLNTVAISPQGTSYASGG 334 (369)
T ss_dssp -----------CEEEEEETTTCC----------EEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred eEEEEecCCCcceeEEEecCCCc----------chhheecccCcEEEEEECCCCCEEEEEc
Confidence 89999999887 3344468999999999999999986654
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-40 Score=317.23 Aligned_cols=287 Identities=18% Similarity=0.243 Sum_probs=222.8
Q ss_pred cccccccccceEEEEECC-CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 4 SQTLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
.+...+|...|+||+|+| ++++||+|+.||+|+|||+.+++....+
T Consensus 112 ~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~--------------------------------- 158 (435)
T 4e54_B 112 LQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFI--------------------------------- 158 (435)
T ss_dssp CCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEE---------------------------------
T ss_pred cccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEE---------------------------------
Confidence 445668999999999999 5679999999999999998765532221
Q ss_pred EEeccccCCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14815 83 AILSDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vw 161 (479)
...+|.+.|++++|+| ++.+|++|+.||+|++||++++..........+...+.+++|+|++++|++|+.||.|++|
T Consensus 159 --~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~w 236 (435)
T 4e54_B 159 --KGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILL 236 (435)
T ss_dssp --CCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEE
T ss_pred --EccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeee
Confidence 1357999999999998 6899999999999999999887543333333445568899999999999999999999999
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecCCC-EEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEE
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 240 (479)
|++.. .+..+..|...|++++|+|+++ ++++|+.|+.|++||+++.... ..+....+|...|++++|+|++++|
T Consensus 237 d~~~~----~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~-~~~~~~~~h~~~v~~~~~spdg~~l 311 (435)
T 4e54_B 237 NMDGK----ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGK-ASFLYSLPHRHPVNAACFSPDGARL 311 (435)
T ss_dssp ESSSC----BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSS-SCCSBCCBCSSCEEECCBCTTSSEE
T ss_pred ccCcc----eeEEEecccceEEeeeecCCCceEEEEecCcceeeEEeccccccc-ceEEEeeeccccccceeECCCCCee
Confidence 99763 4556788999999999999875 7889999999999999876532 1233446799999999999999999
Q ss_pred EEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccc-----cccEEEEEecCCCCeEEEEe------------C
Q psy14815 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-----GRTIYDISWCHLTDLIATAC------------G 303 (479)
Q Consensus 241 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~l~~~~~~~~l~~~~------------~ 303 (479)
++++.||.|++||+....... .+..|. ...+....|+|++.++++++ .
T Consensus 312 ~s~~~D~~i~iwd~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 376 (435)
T 4e54_B 312 LTTDQKSEIRVYSASQWDCPL---------------GLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYE 376 (435)
T ss_dssp EEEESSSCEEEEESSSSSSEE---------------EECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTC
T ss_pred EEEcCCCEEEEEECCCCccce---------------EEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecC
Confidence 999999999999987654321 221110 11122334555554444442 3
Q ss_pred CCeEEEcccCCCCCCCCceeeEEEeccccccccceeEE-EecCCCCCCCccc
Q psy14815 304 DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV-AWNPVVPEPQKTN 354 (479)
Q Consensus 304 dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~-~~sp~~~~l~~~~ 354 (479)
++.|++||..+++ ++..+..+|...|.++ +|||+|++|+.+.
T Consensus 377 ~~~i~iwd~~~g~---------~~~~l~~~~~~~v~s~~~fspdg~~lasg~ 419 (435)
T 4e54_B 377 LRTIDVFDGNSGK---------MMCQLYDPESSGISSLNEFNPMGDTLASAM 419 (435)
T ss_dssp CCCEEEECSSSCC---------EEEEECCSSCCCCCCEEEECTTSSCEEEEC
T ss_pred CCEEEEEECCCCc---------EEEEEeCCCCCcEEEEEEECCCCCEEEEEc
Confidence 4679999999987 5666667888999988 6999999997653
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-39 Score=330.64 Aligned_cols=287 Identities=23% Similarity=0.335 Sum_probs=233.3
Q ss_pred ccccccccccceEEEEECCCC-CeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~-~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
....|++|++.|++++|+|++ ++|+||+.|++|++||+.+..... ..
T Consensus 374 ~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~--------------------------------~~ 421 (694)
T 3dm0_A 374 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY--------------------------------GV 421 (694)
T ss_dssp EEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCS--------------------------------CE
T ss_pred hhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccc--------------------------------cc
Confidence 345789999999999999864 799999999999999986543211 01
Q ss_pred eEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14815 82 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vw 161 (479)
......+|...|.+++|+|++++|++|+.||+|++||+.+++ ....+.+|...|.+++|+|++++|++|+.|++|++|
T Consensus 422 ~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~--~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iw 499 (694)
T 3dm0_A 422 AQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGV--STRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLW 499 (694)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred ccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCc--ceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEE
Confidence 112236899999999999999999999999999999999986 667888999999999999999999999999999999
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecCC--CEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPFD--NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
|+.............+|...|++++|+|++ ..+++++.|+.|++||+++.. ....+.+|.+.|++++|+|++++
T Consensus 500 d~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~----~~~~~~~h~~~v~~v~~spdg~~ 575 (694)
T 3dm0_A 500 NTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK----LRSTLAGHTGYVSTVAVSPDGSL 575 (694)
T ss_dssp CTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC----EEEEECCCSSCEEEEEECTTSSE
T ss_pred ECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc----EEEEEcCCCCCEEEEEEeCCCCE
Confidence 987653322223335788899999999986 689999999999999998765 36778899999999999999999
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCC
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS 319 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 319 (479)
|++|+.||.|++||++.. +++..+.. ...|.+++|+|++.++++++ |+.|++||+.++.
T Consensus 576 l~sg~~Dg~i~iwd~~~~---------------~~~~~~~~--~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~--- 634 (694)
T 3dm0_A 576 CASGGKDGVVLLWDLAEG---------------KKLYSLEA--NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKS--- 634 (694)
T ss_dssp EEEEETTSBCEEEETTTT---------------EEEECCBC--SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTE---
T ss_pred EEEEeCCCeEEEEECCCC---------------ceEEEecC--CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCC---
Confidence 999999999999998543 44555544 45799999999998887665 6679999999875
Q ss_pred CceeeEEEeccc------------------cccccceeEEEecCCCCCCCccc
Q psy14815 320 DMVSFDLVHTEH------------------RAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 320 ~~~~~~~~~~~~------------------~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
++..+. ..+...+++++|||+|++|++++
T Consensus 635 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs 681 (694)
T 3dm0_A 635 ------IVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGY 681 (694)
T ss_dssp ------EEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEE
T ss_pred ------ChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEc
Confidence 222111 01122478999999999997664
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-39 Score=315.29 Aligned_cols=322 Identities=16% Similarity=0.270 Sum_probs=255.4
Q ss_pred cccceEEEEECCCCC-eEEEe----------eCCCcEEEEecccccc---ccccc---------CCCccceEEEeecCCc
Q psy14815 10 HQGRVWNVSWNPQGT-MISSC----------GEDKNIRLWVMVIREP---YEKLH---------GLPVETSLRQLVEDKN 66 (479)
Q Consensus 10 h~~~V~~l~~s~~~~-~l~t~----------~~dg~v~iwd~~~~~~---~~~~~---------~~~~~~~~~~~~~~~~ 66 (479)
+...|.+++|+|+++ +|++| +.|+.|++||+.+++. +..+. ..+++..+++++.++.
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 90 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGS 90 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSC
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCe
Confidence 456899999999987 99999 8899999999987752 22221 2356778888899999
Q ss_pred EEEecCCCCCCceeeeEEeccccCCcEEEEEECCC-CCEEEEEECCCeEEEEECCCCe------EE-EeEEEeCCCCcEE
Q psy14815 67 IRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQ------FE-CNATLEGHENEVK 138 (479)
Q Consensus 67 i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~~~------~~-~~~~~~~~~~~v~ 138 (479)
+++|++........ ......+|...|.+++|+|+ +.+|++++.|+.|++||+.+++ .. ....+..|...|.
T Consensus 91 v~vw~~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~ 169 (416)
T 2pm9_A 91 LELYSTNEANNAIN-SMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVI 169 (416)
T ss_dssp EEEECCSSTTSCCC-EEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCC
T ss_pred EEEeeccccccccc-chhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCee
Confidence 99999985322211 23334689999999999998 8999999999999999998874 11 1223467889999
Q ss_pred EEEEcCC-CCEEEEEeCCCcEEEEEeCCCCceeeeeeeecc------ccceeEEEEecCC-CEEEEEEcCC---cEEEEe
Q psy14815 139 SVTWSKN-GQFLATCSRDKSVWVWEVGEEDEYECAAVINAH------IQDVKKVRFHPFD-NILASASYDD---TVKLFK 207 (479)
Q Consensus 139 ~l~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~------~~~v~~l~~~~~~-~~l~~~~~dg---~i~i~d 207 (479)
+++|+|+ +.+|++++.||.|++||+++. .....+..+ ...+++++|+|++ .++++++.|+ .|++||
T Consensus 170 ~~~~~~~~~~~l~~~~~dg~v~iwd~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d 246 (416)
T 2pm9_A 170 SLAWNQSLAHVFASAGSSNFASIWDLKAK---KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWD 246 (416)
T ss_dssp EEEECSSCTTEEEEESSSSCEEEEETTTT---EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEE
T ss_pred EEEeCCCCCcEEEEEcCCCCEEEEECCCC---CcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEe
Confidence 9999998 789999999999999999987 444555554 7889999999987 6899999998 999999
Q ss_pred cCCcccceEeeeeec-CCCccEEEEEEcc-CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccccc
Q psy14815 208 EDKAEADWINFATLK-SHTSTVWSLAFDR-IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRT 285 (479)
Q Consensus 208 ~~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (479)
+++... ....+. +|...|.+++|+| ++++|++++.|+.|++||++.. +++..+.+| ...
T Consensus 247 ~~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~---------------~~~~~~~~~-~~~ 307 (416)
T 2pm9_A 247 LRNANT---PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA---------------EQLSQFPAR-GNW 307 (416)
T ss_dssp TTSTTS---CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC---------------CEEEEEECS-SSC
T ss_pred CCCCCC---CcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC---------------ccceeecCC-CCc
Confidence 997642 355666 8999999999999 8999999999999999998443 557778886 789
Q ss_pred EEEEEecCCC-CeEEEEeCCCeEEEcccCCCCCCCCcee------------eEEEe-------------cccccccccee
Q psy14815 286 IYDISWCHLT-DLIATACGDDAIRIFKENPEAGDSDMVS------------FDLVH-------------TEHRAHNQDVN 339 (479)
Q Consensus 286 i~~l~~~~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~~~------------~~~~~-------------~~~~~h~~~v~ 339 (479)
|.+++|+|++ .+|++++.||.|++|++........... +.... .....|..+++
T Consensus 308 v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (416)
T 2pm9_A 308 CFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSP 387 (416)
T ss_dssp CCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSC
T ss_pred eEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCcc
Confidence 9999999998 8999999999999999987753221100 00000 11223677888
Q ss_pred EEEecCCCCCCCccc
Q psy14815 340 CVAWNPVVPEPQKTN 354 (479)
Q Consensus 340 ~~~~sp~~~~l~~~~ 354 (479)
+++|+|+|++|+.+.
T Consensus 388 ~~~~s~dg~~la~~~ 402 (416)
T 2pm9_A 388 AAHWAFGGKLVQITP 402 (416)
T ss_dssp CCEEETTTEEECBCT
T ss_pred ceEEeeCCeEEEEeC
Confidence 999999999998765
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-39 Score=307.82 Aligned_cols=300 Identities=17% Similarity=0.175 Sum_probs=233.3
Q ss_pred ccccccccccceEEEEECCCC-CeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~-~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
..+++.+|.+.|++++|+|++ ++|++|+.||+|+|||+.+++....+
T Consensus 65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-------------------------------- 112 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFI-------------------------------- 112 (383)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEE--------------------------------
T ss_pred eEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceee--------------------------------
Confidence 456788999999999999999 99999999999999999766543322
Q ss_pred eEEeccccCCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 82 KAILSDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
...+|...|.+++|+| ++++|++++.|+.|++||+++...........|...|.+++|+|++++|++|+.||.|++
T Consensus 113 ---~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 189 (383)
T 3ei3_B 113 ---QGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLL 189 (383)
T ss_dssp ---CCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEE
T ss_pred ---ecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEE
Confidence 1246899999999999 789999999999999999997643333333344588999999999999999999999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCCC-EEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEcc-CCC
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR-IGS 238 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~ 238 (479)
||++. .....+..|...|.+++|+|+++ +|++++.|+.|++||+++.......+..+ .|...|.+++|+| +++
T Consensus 190 ~d~~~----~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~ 264 (383)
T 3ei3_B 190 LGLDG----HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDST 264 (383)
T ss_dssp EETTS----CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSC
T ss_pred EECCC----CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCC
Confidence 99953 45667888999999999999998 99999999999999999754322334444 6999999999999 999
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCC--CceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDND--SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+|++++.|+.|++||++.......+...... .....+. ..-+....+..++|+|++++ +++.||.|++||+.+++
T Consensus 265 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~ 341 (383)
T 3ei3_B 265 KLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIK-ATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGG 341 (383)
T ss_dssp EEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCC-CEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCC
T ss_pred EEEEEcCCCcEEEEECCCCccccccccccccccccccceE-EeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCc
Confidence 9999999999999999776543221110000 0000000 01111345667888888887 88899999999999887
Q ss_pred CCCCceeeEEEecccc-ccccceeEEEecCCCCCCCccc
Q psy14815 317 GDSDMVSFDLVHTEHR-AHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 317 ~~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
++..+.. .|...+..++|+|++++|+.++
T Consensus 342 ---------~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s 371 (383)
T 3ei3_B 342 ---------LVHQLRDPNAAGIISLNKFSPTGDVLASGM 371 (383)
T ss_dssp ---------EEEEECBTTBCSCCCEEEECTTSSEEEEEE
T ss_pred ---------eeeeecCCCCCceEEEEEEecCccEEEEec
Confidence 3444321 2567788889999999987663
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=305.96 Aligned_cols=286 Identities=17% Similarity=0.258 Sum_probs=236.5
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEeccccc------ccccccCC----------Cc----c---ceEE
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIRE------PYEKLHGL----------PV----E---TSLR 59 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~------~~~~~~~~----------~~----~---~~~~ 59 (479)
..+++++|.+.|++++|+| ++|++|+.||+|++||+.+++ ....+..+ +. + ..++
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence 4677899999999999998 899999999999999999887 45544443 34 5 6788
Q ss_pred EeecCCcEEEecCCCCCCceeeeEEecccc-----CCcEEEEEEC----CCCCE-EEEEECCCeEEEEECCC------Ce
Q psy14815 60 QLVEDKNIRLWGKESFGNKFTAKAILSDGH-----QRTIRETAWS----PCGNF-IASASFDATTAVWDKRS------GQ 123 (479)
Q Consensus 60 ~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~-----~~~v~~v~~~----~~~~~-l~t~~~dg~i~iwd~~~------~~ 123 (479)
+++.++.+++|++................| ...|.+++|+ |++++ |++++.||.|++||+.+ ++
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 165 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL 165 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred EEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccc
Confidence 889999999999986443222212333566 5999999999 99999 99999999999999987 43
Q ss_pred EEEeE-----EE-------eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeec---c---ccceeEE
Q psy14815 124 FECNA-----TL-------EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA---H---IQDVKKV 185 (479)
Q Consensus 124 ~~~~~-----~~-------~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~---~---~~~v~~l 185 (479)
.+. .+ ..|...|.+++|+|++ ++++++.||.|++||+++. .....+.. | ...|.++
T Consensus 166 --~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~h~~~~~~i~~i 239 (397)
T 1sq9_A 166 --TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTL---RPLYNFESQHSMINNSNSIRSV 239 (397)
T ss_dssp --TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTT---EEEEEEECCC---CCCCCEEEE
T ss_pred --eeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCC---ceeEEEeccccccccCCccceE
Confidence 222 44 4588899999999999 9999999999999999987 55666777 8 8999999
Q ss_pred EEecCCCEEEEEEcC---CcEEEEecCCcccceEeeeeecC-------------CCccEEEEEEccCCCEEEEeeCCCeE
Q psy14815 186 RFHPFDNILASASYD---DTVKLFKEDKAEADWINFATLKS-------------HTSTVWSLAFDRIGSRLATCSDDATV 249 (479)
Q Consensus 186 ~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~s~~~dg~i 249 (479)
+|+|++++|++++.| |.|++||+++++. +..+.. |...|.+++|+|++++|++++.||.|
T Consensus 240 ~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 315 (397)
T 1sq9_A 240 KFSPQGSLLAIAHDSNSFGCITLYETEFGER----IGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKL 315 (397)
T ss_dssp EECSSTTEEEEEEEETTEEEEEEEETTTCCE----EEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred EECCCCCEEEEEecCCCCceEEEEECCCCcc----cceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeE
Confidence 999999999999999 9999999997653 566777 99999999999999999999999999
Q ss_pred EEEeccCCCCCCCCCCCCCCCceEEEEEEe------cc--------------ccccEEEEEecCCC----------CeEE
Q psy14815 250 KIWKEYKPGNSAGIPTPDNDSVWKCVCTLS------GH--------------HGRTIYDISWCHLT----------DLIA 299 (479)
Q Consensus 250 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~------~~--------------~~~~i~~l~~~~~~----------~~l~ 299 (479)
++||+... +++..+. +| |..+|++++|+|++ ++|+
T Consensus 316 ~iwd~~~~---------------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~ 380 (397)
T 1sq9_A 316 RFWDVKTK---------------ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLC 380 (397)
T ss_dssp EEEETTTT---------------EEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEE
T ss_pred EEEEcCCC---------------ceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEE
Confidence 99998443 5566666 43 27799999999998 7999
Q ss_pred EEeCCCeEEEcccCCC
Q psy14815 300 TACGDDAIRIFKENPE 315 (479)
Q Consensus 300 ~~~~dg~i~vw~~~~~ 315 (479)
+++.||.|++|+++++
T Consensus 381 s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 381 CVCLDRSIRWFREAGG 396 (397)
T ss_dssp EEETTTEEEEEEEEC-
T ss_pred EecCCCcEEEEEcCCC
Confidence 9999999999998775
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=302.01 Aligned_cols=295 Identities=17% Similarity=0.193 Sum_probs=238.9
Q ss_pred cccccccceEEEEECCCCCeEEEeeCCCcEEEEeccccc--ccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 6 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIRE--PYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 6 ~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
.+..|.++|++++|+|++++|++++.|+.|++||+.+++ .+..
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~----------------------------------- 47 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHE----------------------------------- 47 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEE-----------------------------------
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeee-----------------------------------
Confidence 456699999999999999999999999999999987654 2222
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
..+|...|.+++|+|++++|++++.||.|++||+++++......+..|...|.+++|+|++++|++++.||.|++||+
T Consensus 48 --~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~ 125 (372)
T 1k8k_C 48 --LKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYF 125 (372)
T ss_dssp --EECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEE
T ss_pred --ecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEe
Confidence 247899999999999999999999999999999999876556666789999999999999999999999999999999
Q ss_pred CCCCceeeeee-eeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcc--------------cceEeeeeecCCCccE
Q psy14815 164 GEEDEYECAAV-INAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE--------------ADWINFATLKSHTSTV 228 (479)
Q Consensus 164 ~~~~~~~~~~~-~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~--------------~~~~~~~~~~~~~~~v 228 (479)
+.......... ...|...|.+++|+|++++|++++.||.|++||++... .....+..+..|...|
T Consensus 126 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 205 (372)
T 1k8k_C 126 EQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWV 205 (372)
T ss_dssp ETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCE
T ss_pred cCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeE
Confidence 98764333333 35678999999999999999999999999999975211 0123466777899999
Q ss_pred EEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEE
Q psy14815 229 WSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIR 308 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~ 308 (479)
.+++|+|++++|++++.|+.|++||++.. +++..+..| ..+|.+++|+|++.+++++ .|+.|+
T Consensus 206 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~---------------~~~~~~~~~-~~~v~~~~~~~~~~~l~~~-~d~~i~ 268 (372)
T 1k8k_C 206 HGVCFSANGSRVAWVSHDSTVCLADADKK---------------MAVATLASE-TLPLLAVTFITESSLVAAG-HDCFPV 268 (372)
T ss_dssp EEEEECSSSSEEEEEETTTEEEEEEGGGT---------------TEEEEEECS-SCCEEEEEEEETTEEEEEE-TTSSCE
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEECCCC---------------ceeEEEccC-CCCeEEEEEecCCCEEEEE-eCCeEE
Confidence 99999999999999999999999998543 456777776 7799999999999988887 899999
Q ss_pred EcccCC--CCC----CCC-------------------ceeeEEE------eccccccccceeEEEec-CCC---CCCCcc
Q psy14815 309 IFKENP--EAG----DSD-------------------MVSFDLV------HTEHRAHNQDVNCVAWN-PVV---PEPQKT 353 (479)
Q Consensus 309 vw~~~~--~~~----~~~-------------------~~~~~~~------~~~~~~h~~~v~~~~~s-p~~---~~l~~~ 353 (479)
+|++.. ++- ..+ ....... ..+..+|..+|++++|+ ++| .+|+++
T Consensus 269 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~ 348 (372)
T 1k8k_C 269 LFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTT 348 (372)
T ss_dssp EEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEE
T ss_pred EEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEe
Confidence 999987 310 000 0000011 33335899999999976 666 788654
Q ss_pred c
Q psy14815 354 N 354 (479)
Q Consensus 354 ~ 354 (479)
+
T Consensus 349 ~ 349 (372)
T 1k8k_C 349 G 349 (372)
T ss_dssp E
T ss_pred c
Confidence 3
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-38 Score=293.93 Aligned_cols=269 Identities=17% Similarity=0.271 Sum_probs=228.7
Q ss_pred cccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCe--EE
Q psy14815 48 KLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ--FE 125 (479)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~--~~ 125 (479)
.+...+++..+++++.|+++++||...... ......|...|.+++|+|++++|++|+.|+.|++|++.+++ ..
T Consensus 60 ~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~-----~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~ 134 (340)
T 1got_B 60 AMHWGTDSRLLLSASQDGKLIIWDSYTTNK-----VHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVR 134 (340)
T ss_dssp EEEECTTSSEEEEEETTTEEEEEETTTCCE-----EEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCE
T ss_pred EEEECCCCCEEEEEeCCCcEEEEECCCCCc-----ceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcce
Confidence 334456778899999999999999874321 12235788999999999999999999999999999998753 23
Q ss_pred EeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEE
Q psy14815 126 CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL 205 (479)
Q Consensus 126 ~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i 205 (479)
....+.+|.+.|.++.|++++. +++++.|+.|++||++++ .....+.+|...|.+++|+|+++++++|+.|+.|++
T Consensus 135 ~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~ 210 (340)
T 1got_B 135 VSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETG---QQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKL 210 (340)
T ss_dssp EEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCC---cEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEE
Confidence 5567889999999999998765 899999999999999987 566778899999999999999999999999999999
Q ss_pred EecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc-ccc
Q psy14815 206 FKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGR 284 (479)
Q Consensus 206 ~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 284 (479)
||++++.. ...+.+|...|++++|+|++++|++|+.||+|++||++.. ..+..+... +..
T Consensus 211 wd~~~~~~----~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~---------------~~~~~~~~~~~~~ 271 (340)
T 1got_B 211 WDVREGMC----RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD---------------QELMTYSHDNIIC 271 (340)
T ss_dssp EETTTCSE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT---------------EEEEEECCTTCCS
T ss_pred EECCCCee----EEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC---------------cEEEEEccCCccc
Confidence 99997653 6778899999999999999999999999999999998543 334444322 235
Q ss_pred cEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 285 TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 285 ~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.|.+++|+|++++|++|+.||.|++||+..++ ....+.+|..+|.+++|+|++.+|++++
T Consensus 272 ~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~----------~~~~~~~h~~~v~~~~~s~dg~~l~s~s 331 (340)
T 1got_B 272 GITSVSFSKSGRLLLAGYDDFNCNVWDALKAD----------RAGVLAGHDNRVSCLGVTDDGMAVATGS 331 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCC----------EEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred ceEEEEECCCCCEEEEECCCCeEEEEEcccCc----------EeeEeecCCCcEEEEEEcCCCCEEEEEc
Confidence 79999999999999999999999999998876 3344568999999999999999997765
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-38 Score=294.16 Aligned_cols=265 Identities=25% Similarity=0.486 Sum_probs=202.8
Q ss_pred ccc-cc-cccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 5 QTL-KG-HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 5 ~~l-~~-h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
.++ .+ |.+.|++++|+|++++|++|+.|++|+|||+....... .. ...
T Consensus 50 ~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~-----------------------------~~-~~~ 99 (330)
T 2hes_X 50 DVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRT-----------------------------FE-MDL 99 (330)
T ss_dssp EEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC------------------------------------CC-CEE
T ss_pred EEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCcc-----------------------------cc-cee
Confidence 344 34 99999999999999999999999999999975322100 00 011
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCC--eEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG--QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
.....+|...|.+++|+|++++|++|+.|++|++||+... ....+..+.+|...|.+++|+|++.+|++|+.|+.|++
T Consensus 100 ~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~i 179 (330)
T 2hes_X 100 LAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRI 179 (330)
T ss_dssp EEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred EEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEE
Confidence 1223689999999999999999999999999999999532 23456788899999999999999999999999999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecC--CCEEEEEEcCCcEEEEecCCccc----ceEeeeeecC-CCccEEEEEE
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPF--DNILASASYDDTVKLFKEDKAEA----DWINFATLKS-HTSTVWSLAF 233 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~-~~~~v~~~~~ 233 (479)
||..... ..++..+.+|...|.+++|+|+ +.+|++|+.|++|++||++.... .+.....+.. |...|.+++|
T Consensus 180 W~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 258 (330)
T 2hes_X 180 WKDYDDD-WECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAW 258 (330)
T ss_dssp EEEETTE-EEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEE
T ss_pred EECCCCC-eeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEE
Confidence 9987642 2466778899999999999998 67899999999999999975421 1233444554 8999999999
Q ss_pred ccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEE-eccccccEEEEEecC--CCCeEEEEeCCCeEEEc
Q psy14815 234 DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL-SGHHGRTIYDISWCH--LTDLIATACGDDAIRIF 310 (479)
Q Consensus 234 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~l~~~~--~~~~l~~~~~dg~i~vw 310 (479)
++++ +|++++.||.|++||.... .++..... .+|....|.+++|+| ++++|++|+.||+|++|
T Consensus 259 s~~~-~l~s~~~dg~v~iw~~~~~-------------~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W 324 (330)
T 2hes_X 259 GFNG-LIASVGADGVLAVYEEVDG-------------EWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFW 324 (330)
T ss_dssp CTTS-CEEEEETTSCEEEEEEETT-------------EEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEE
T ss_pred cCCC-EEEEEeCCCEEEEEEcCCC-------------ceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEE
Confidence 9654 8999999999999997432 12233333 455333899999999 68899999999999999
Q ss_pred ccCC
Q psy14815 311 KENP 314 (479)
Q Consensus 311 ~~~~ 314 (479)
+++.
T Consensus 325 ~~~~ 328 (330)
T 2hes_X 325 SLEK 328 (330)
T ss_dssp EC--
T ss_pred Eecc
Confidence 9865
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=301.83 Aligned_cols=267 Identities=23% Similarity=0.390 Sum_probs=225.7
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
+++++++|.+.|++++|+|++++|++|+.||.|+|||+..+.. ..
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~-----------------------------------~~ 47 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH-----------------------------------KL 47 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE-----------------------------------EE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcc-----------------------------------ee
Confidence 5678999999999999999999999999999999999862211 11
Q ss_pred EEeccccCCcEEEEEECCC--CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCcE
Q psy14815 83 AILSDGHQRTIRETAWSPC--GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSV 158 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i 158 (479)
.....+|...|++++|+++ +++|++++.||.|++||+.+++......+..|...|.+++|+|+ +.+|++++.||.|
T Consensus 48 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i 127 (379)
T 3jrp_A 48 IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKV 127 (379)
T ss_dssp EEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEE
T ss_pred eeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcE
Confidence 1123579999999999987 89999999999999999999976677888899999999999999 9999999999999
Q ss_pred EEEEeCCCCceeeeeeeeccccceeEEEEec-------------CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCC
Q psy14815 159 WVWEVGEEDEYECAAVINAHIQDVKKVRFHP-------------FDNILASASYDDTVKLFKEDKAEADWINFATLKSHT 225 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~-------------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 225 (479)
++||++.... .....+..|...|++++|+| ++++|++++.||.|++||++...........+..|.
T Consensus 128 ~v~d~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~ 206 (379)
T 3jrp_A 128 SVVEFKENGT-TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS 206 (379)
T ss_dssp EEEECCTTSC-CCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS
T ss_pred EEEecCCCCc-eeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEeccc
Confidence 9999988743 23345678899999999999 699999999999999999988776566777888999
Q ss_pred ccEEEEEEccC---CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe
Q psy14815 226 STVWSLAFDRI---GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 226 ~~v~~~~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~ 302 (479)
..|.+++|+|+ +++|++++.||.|++||++...... ......... +...|.+++|+|++++|++++
T Consensus 207 ~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~----------~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 207 DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPW----------KKTLLKEEK-FPDVLWRASWSLSGNVLALSG 275 (379)
T ss_dssp SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCC----------EEEESSSSC-CSSCEEEEEECSSSCCEEEEE
T ss_pred CcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccc----------eeeeecccc-CCCcEEEEEEcCCCCEEEEec
Confidence 99999999999 8999999999999999997653211 011111222 377899999999999999999
Q ss_pred CCCeEEEcccCCCC
Q psy14815 303 GDDAIRIFKENPEA 316 (479)
Q Consensus 303 ~dg~i~vw~~~~~~ 316 (479)
.||.|++|++....
T Consensus 276 ~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 276 GDNKVTLWKENLEG 289 (379)
T ss_dssp SSSSEEEEEEEETT
T ss_pred CCCcEEEEeCCCCC
Confidence 99999999998643
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-38 Score=290.50 Aligned_cols=251 Identities=22% Similarity=0.292 Sum_probs=214.0
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
+++++++|..+|.+++|+|++++|++|+.|++|++||+.+++.+..+
T Consensus 47 ~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~--------------------------------- 93 (304)
T 2ynn_A 47 EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDF--------------------------------- 93 (304)
T ss_dssp EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEE---------------------------------
T ss_pred eeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEE---------------------------------
Confidence 45678899999999999999999999999999999999877655443
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVW 161 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vw 161 (479)
.+|...|.+++|+|++++|++|+.|++|++||++++. .....+.+|...|.+++|+| ++..|++|+.||.|++|
T Consensus 94 ----~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iw 168 (304)
T 2ynn_A 94 ----EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVW 168 (304)
T ss_dssp ----ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTT-EEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEE
T ss_pred ----eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCc-chhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEE
Confidence 5789999999999999999999999999999998774 24567889999999999999 67899999999999999
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEec--CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHP--FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
|++.... .......|...+..+.|+| ++++|++|+.|++|++||++++. ++..+.+|...|.+++|+|++++
T Consensus 169 d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~----~~~~~~~h~~~v~~~~~~p~~~~ 242 (304)
T 2ynn_A 169 SLGQSTP--NFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS----CVATLEGHMSNVSFAVFHPTLPI 242 (304)
T ss_dssp ETTCSSC--SEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTE----EEEEEECCSSCEEEEEECSSSSE
T ss_pred ECCCCCc--cceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCc----cceeeCCCCCCEEEEEECCCCCE
Confidence 9987642 2223345667899999987 67899999999999999999765 47888999999999999999999
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC--eEEEEeCCCeEEEcccCC
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD--LIATACGDDAIRIFKENP 314 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~--~l~~~~~dg~i~vw~~~~ 314 (479)
|++|+.||+|++||+.. +++..++..+ ...+.+++|+|++. ++++|+.| .+.+|++..
T Consensus 243 l~s~s~Dg~i~iWd~~~---------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~~~ 302 (304)
T 2ynn_A 243 IISGSEDGTLKIWNSST---------------YKVEKTLNVG-LERSWCIATHPTGRKNYIASGFDN-GFTVLSLGN 302 (304)
T ss_dssp EEEEETTSCEEEEETTT---------------CCEEEEECCS-SSSEEEEEECTTCGGGCEEEEETT-EEEEEECC-
T ss_pred EEEEcCCCeEEEEECCC---------------CceeeeccCC-CccEEEEEECCCCCceEEEEecCC-ceEEEEecc
Confidence 99999999999999843 3567788776 77899999999875 57776654 566887654
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=293.74 Aligned_cols=285 Identities=14% Similarity=0.123 Sum_probs=217.9
Q ss_pred ccceEEEEECCCCCeEEEeeCCC-------cEEEEecccccccc----------cccCCC--------ccceEEE-----
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDK-------NIRLWVMVIREPYE----------KLHGLP--------VETSLRQ----- 60 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg-------~v~iwd~~~~~~~~----------~~~~~~--------~~~~~~~----- 60 (479)
.-+|+|++|+||+++|++||.|. .|++|++..+.... .+..+. ....+++
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~~ 93 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNEN 93 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCCC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECCC
Confidence 35899999999999999997543 59999987554321 122221 1222222
Q ss_pred ------eecCCcEEEecCCCCCCceeeeEEe----ccccCCcEEEEEECCCCCEEEEEE--CCCeEEEEECCCCeEEEeE
Q psy14815 61 ------LVEDKNIRLWGKESFGNKFTAKAIL----SDGHQRTIRETAWSPCGNFIASAS--FDATTAVWDKRSGQFECNA 128 (479)
Q Consensus 61 ------~~~~~~i~~w~~~~~~~~~~~~~~~----~~~~~~~v~~v~~~~~~~~l~t~~--~dg~i~iwd~~~~~~~~~~ 128 (479)
+..++.+++|++............. ...+...+.+++|+|||+++++++ .|++|+|||+++++ .+.
T Consensus 94 ~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~--~~~ 171 (365)
T 4h5i_A 94 STKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLT--EKF 171 (365)
T ss_dssp HHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTE--EEE
T ss_pred ccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCc--EEE
Confidence 2346789999887544433222211 123456689999999999987654 68999999999987 455
Q ss_pred EEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCC----cEE
Q psy14815 129 TLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD----TVK 204 (479)
Q Consensus 129 ~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg----~i~ 204 (479)
.+. |...|.+++|+|+|+++++++. +.+++|+..++.. ........|...|++++|+|+++++++++.|+ .++
T Consensus 172 ~~~-~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~-~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~ 248 (365)
T 4h5i_A 172 EIE-TRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGSC-IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLT 248 (365)
T ss_dssp EEE-CSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCCE-EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEE
T ss_pred EeC-CCCceEEEEEccCCceEEeccc-eeEEEEEeccCcc-eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEe
Confidence 555 7788999999999999999985 4566777766532 22234567888999999999999999999887 588
Q ss_pred EEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEE-ecccc
Q psy14815 205 LFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL-SGHHG 283 (479)
Q Consensus 205 i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 283 (479)
+|++............+.+|...|++++|+|+|++|++|+.|++|+|||+. +++++.++ .+| .
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~---------------~~~~~~~~~~gH-~ 312 (365)
T 4h5i_A 249 KISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLK---------------DLSMSKIFKQAH-S 312 (365)
T ss_dssp EEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETT---------------TTEEEEEETTSS-S
T ss_pred ecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECC---------------CCcEEEEecCcc-c
Confidence 899876654444556778899999999999999999999999999999984 34667775 555 8
Q ss_pred ccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 284 RTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 284 ~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
.+|++++|+|||++|++||.|++|+||++....
T Consensus 313 ~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 313 FAITEVTISPDSTYVASVSAANTIHIIKLPLNY 345 (365)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEECCTTT
T ss_pred CCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 899999999999999999999999999997543
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-38 Score=295.13 Aligned_cols=261 Identities=21% Similarity=0.286 Sum_probs=206.4
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
.+++.+|...|++++|+|++.+|++|+.|++|++||+.+++.+..+
T Consensus 69 ~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~---------------------------------- 114 (343)
T 2xzm_R 69 HKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRF---------------------------------- 114 (343)
T ss_dssp EEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEE----------------------------------
T ss_pred cchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEE----------------------------------
Confidence 4678999999999999999999999999999999999877654433
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCC----------CEEEEEe
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG----------QFLATCS 153 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~----------~~l~~~~ 153 (479)
.+|...|.+++|+|++++|++++.|++|++||+.............|...|.+++|+|++ .+|++++
T Consensus 115 ---~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~ 191 (343)
T 2xzm_R 115 ---VGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVG 191 (343)
T ss_dssp ---ECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEE
T ss_pred ---cCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEc
Confidence 578999999999999999999999999999999854322112223688899999999986 7899999
Q ss_pred CCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEE
Q psy14815 154 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF 233 (479)
Q Consensus 154 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~ 233 (479)
.||.|++||... .....+..|...|++++|+|++++|++|+.||.|++||+..... ....+ .+...|.+++|
T Consensus 192 ~d~~i~iwd~~~----~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~---~~~~~-~~~~~v~~v~~ 263 (343)
T 2xzm_R 192 WDGRLKVWNTNF----QIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTY---PQREF-DAGSTINQIAF 263 (343)
T ss_dssp TTSEEEEEETTT----EEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSS---CSEEE-ECSSCEEEEEE
T ss_pred CCCEEEEEcCCC----ceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcc---cceee-cCCCcEEEEEE
Confidence 999999999432 45567889999999999999999999999999999999954332 12222 24567999999
Q ss_pred ccCCCEEEEeeCCCeEEEEeccCCCCCC--CCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcc
Q psy14815 234 DRIGSRLATCSDDATVKIWKEYKPGNSA--GIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 234 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~ 311 (479)
+|++.+++++ .|+.|++||+....... .+... ... ......+| ...|.+++|+|++++|++|+.||.|++|+
T Consensus 264 sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~-~~~---~~~~~~~~-~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~ 337 (343)
T 2xzm_R 264 NPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAE-PIT---KAEGQKGK-NPQCTSLAWNALGKKLFAGFTDGVIRTFS 337 (343)
T ss_dssp CSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCC-SGG---GBTTBCCS-CCCEEEEEECSSSCCEEEEETTSEEEEEE
T ss_pred CCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecC-cch---hhhhhcCC-CCceEEEEECCCCCeEEEecCCceEEEEE
Confidence 9999877655 57889999986654321 10000 000 00011233 67899999999999999999999999999
Q ss_pred cCCC
Q psy14815 312 ENPE 315 (479)
Q Consensus 312 ~~~~ 315 (479)
+.++
T Consensus 338 ~~~g 341 (343)
T 2xzm_R 338 FETS 341 (343)
T ss_dssp EEEE
T ss_pred EEcc
Confidence 8764
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=297.40 Aligned_cols=248 Identities=28% Similarity=0.402 Sum_probs=207.1
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR 91 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 91 (479)
..|++++|+|+|++|++|+.|++|++||+.+++.+..+ .+|..
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~-------------------------------------~~h~~ 166 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMIL-------------------------------------QGHEQ 166 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-------------------------------------CCCSS
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE-------------------------------------ccCCC
Confidence 35999999999999999999999999998776544332 57899
Q ss_pred cEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEEeCCCCcee
Q psy14815 92 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDEYE 170 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~ 170 (479)
.|.+++|+|++++|++++.|++|++||+++++ ....+. +...+.+++|+| ++++|++|+.||.|++||++++....
T Consensus 167 ~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~ 243 (393)
T 1erj_A 167 DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ--CSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVE 243 (393)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTE--EEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEE
T ss_pred CEEEEEEcCCCCEEEEecCCCcEEEEECCCCe--eEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 99999999999999999999999999999986 344444 567899999999 89999999999999999998874322
Q ss_pred ee----eeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCccc--------ceEeeeeecCCCccEEEEEEccCCC
Q psy14815 171 CA----AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA--------DWINFATLKSHTSTVWSLAFDRIGS 238 (479)
Q Consensus 171 ~~----~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~ 238 (479)
.. ....+|...|.+++|+|++++|++|+.|+.|++||++.... ...+...+.+|...|.+++|+|+++
T Consensus 244 ~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 323 (393)
T 1erj_A 244 RLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDE 323 (393)
T ss_dssp EEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGC
T ss_pred eecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCC
Confidence 22 11257889999999999999999999999999999986432 1123456778999999999999999
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC------CCCeEEEEeCCCeEEEccc
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH------LTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~------~~~~l~~~~~dg~i~vw~~ 312 (479)
+|++|+.|+.|++||...+ +++..+.+| ...|.+++|++ ++.+|++|+.||+|++|++
T Consensus 324 ~l~sgs~D~~v~iwd~~~~---------------~~~~~l~~h-~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 324 YILSGSKDRGVLFWDKKSG---------------NPLLMLQGH-RNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 387 (393)
T ss_dssp EEEEEETTSEEEEEETTTC---------------CEEEEEECC-SSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred EEEEEeCCCeEEEEECCCC---------------eEEEEECCC-CCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcc
Confidence 9999999999999998433 557788887 78999999886 6789999999999999998
Q ss_pred CCC
Q psy14815 313 NPE 315 (479)
Q Consensus 313 ~~~ 315 (479)
...
T Consensus 388 ~~~ 390 (393)
T 1erj_A 388 KKI 390 (393)
T ss_dssp EEC
T ss_pred ccc
Confidence 654
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=300.28 Aligned_cols=305 Identities=12% Similarity=0.187 Sum_probs=239.9
Q ss_pred cccccccceEEEEECCC----CCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 6 TLKGHQGRVWNVSWNPQ----GTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 6 ~l~~h~~~V~~l~~s~~----~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
.+.+|.+.|++++|+|+ ...+++++.++.|++||+.+++.+..+.
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~------------------------------- 61 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQ------------------------------- 61 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEE-------------------------------
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeee-------------------------------
Confidence 34589999999999984 4566666667799999998776654431
Q ss_pred eEEeccccCCcEEEEEECCC----CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCC
Q psy14815 82 KAILSDGHQRTIRETAWSPC----GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDK 156 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~----~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg 156 (479)
......|...|.+++|+|+ +.+|++|+.||.|++||+.+++ .+..+.+|...|.+++|+| ++++|++++.||
T Consensus 62 -~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg 138 (366)
T 3k26_A 62 -SYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQ--CIKHYVGHGNAINELKFHPRDPNLLLSVSKDH 138 (366)
T ss_dssp -EEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCC--EEEEEESCCSCEEEEEECSSCTTEEEEEETTS
T ss_pred -eccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhce--EeeeecCCCCcEEEEEECCCCCCEEEEEeCCC
Confidence 1112347789999999998 6799999999999999999886 5677889999999999999 999999999999
Q ss_pred cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccce---------------------
Q psy14815 157 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW--------------------- 215 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--------------------- 215 (479)
.|++||+++++.......+..|...|.+++|+|++++|++++.||.|++||++++....
T Consensus 139 ~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (366)
T 3k26_A 139 ALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQK 218 (366)
T ss_dssp CEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEE
T ss_pred eEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCccccccee
Confidence 99999999874332222236899999999999999999999999999999998654210
Q ss_pred ---EeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec
Q psy14815 216 ---INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 292 (479)
Q Consensus 216 ---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 292 (479)
........|...|.+++|+ ++++++++.|+.|++||+........... ........+..+..| ...|++++|+
T Consensus 219 ~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~v~~~~~s 294 (366)
T 3k26_A 219 IHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIK-PSESNVTILGRFDYS-QCDIWYMRFS 294 (366)
T ss_dssp ECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCC-TTCCCEEEEEEEECS-SCCSSCCCCE
T ss_pred eccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccc-cCCcchheecccccc-CCcEEEEEEc
Confidence 0122334499999999999 77999999999999999977654322211 122334667788887 7789999999
Q ss_pred CC--CCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEecccccc--ccceeEEEecCCCCCCCccc
Q psy14815 293 HL--TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH--NQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 293 ~~--~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~sp~~~~l~~~~ 354 (479)
|+ +++|++++.||.|++||+..++... .... .+.+| ...|++++|+|++++|+.+.
T Consensus 295 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~-----~~~~-~~~~~~~~~~v~~~~~s~~~~~l~s~~ 354 (366)
T 3k26_A 295 MDFWQKMLALGNQVGKLYVWDLEVEDPHK-----AKCT-TLTHHKCGAAIRQTSFSRDSSILIAVC 354 (366)
T ss_dssp ECTTSSEEEEECTTSCEEEEECCSSSGGG-----CEEE-EECCTTCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCCCcEEEEEecCCcEEEEECCCCCCcc-----ccce-EEcccccCCceEEEEeCCCCCeEEEEe
Confidence 99 9999999999999999999875110 0111 22345 79999999999999987654
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=299.20 Aligned_cols=304 Identities=15% Similarity=0.193 Sum_probs=215.1
Q ss_pred EEEECCCCCeEEEeeCCCcEEEEecccccc------cccccCCCccceEEEeec------CCcEEEecCCCCCCceeeeE
Q psy14815 16 NVSWNPQGTMISSCGEDKNIRLWVMVIREP------YEKLHGLPVETSLRQLVE------DKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 16 ~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~------~~~~~~~~~~~~~~~~~~------~~~i~~w~~~~~~~~~~~~~ 83 (479)
.+.+.+++.++.+. .+.....|++....+ +..+...|++..+++++. |+.+++|+.......... .
T Consensus 10 g~d~g~~~~~~~~~-g~~~~~~w~~p~~~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~-~ 87 (357)
T 4g56_B 10 GVDLGTENLYFQSN-GSSKGSAWGRPVTAPACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESL-C 87 (357)
T ss_dssp -------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGG-C
T ss_pred CCCCCccceEEecC-CCccccccCCCCCCcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeE-e
Confidence 35556666555444 466789999865433 445556788899999887 677899987653322111 1
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEe--EEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECN--ATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~--~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vw 161 (479)
....+|...|.+++|+|++. +++++.||+|++||+.+++.... ....+|...|.+++|+|++++|++|+.||.|++|
T Consensus 88 ~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iw 166 (357)
T 4g56_B 88 TAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVW 166 (357)
T ss_dssp SEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred cccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 12246889999999999975 56678899999999988763322 3455799999999999999999999999999999
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecCC-CEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC-CE
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SR 239 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~ 239 (479)
|++++ +....+..|...|++++|+|++ .++++++.||.|++||+++++. ........|...+.+++|+|++ .+
T Consensus 167 d~~~~---~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~--~~~~~~~~~~~~v~~v~~sp~~~~~ 241 (357)
T 4g56_B 167 DLSQK---AVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP--ATRIDFCASDTIPTSVTWHPEKDDT 241 (357)
T ss_dssp ETTTT---EEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC--BCBCCCTTCCSCEEEEEECTTSTTE
T ss_pred ECCCC---cEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCce--eeeeeeccccccccchhhhhcccce
Confidence 99987 6677888999999999999987 4789999999999999997764 2223445677889999999975 67
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCC-CeEEEEeCCCeEEEcccCCCCCC
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIFKENPEAGD 318 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~-~~l~~~~~dg~i~vw~~~~~~~~ 318 (479)
|++|+.|+.|++||++.. +++..+.+| ...|++++|+|++ ++|++|+.|++|+|||+++++
T Consensus 242 la~g~~d~~i~~wd~~~~---------------~~~~~~~~~-~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~-- 303 (357)
T 4g56_B 242 FACGDETGNVSLVNIKNP---------------DSAQTSAVH-SQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE-- 303 (357)
T ss_dssp EEEEESSSCEEEEESSCG---------------GGCEEECCC-SSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE--
T ss_pred EEEeecccceeEEECCCC---------------cEeEEEecc-ceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc--
Confidence 889999999999998544 335667776 7899999999987 589999999999999999876
Q ss_pred CCceeeEEEeccccccccceeEEEecC-CCCCCCccc
Q psy14815 319 SDMVSFDLVHTEHRAHNQDVNCVAWNP-VVPEPQKTN 354 (479)
Q Consensus 319 ~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~~~~ 354 (479)
++.. .+|.+.|++++||| ++.+|++++
T Consensus 304 -------~~~~--~~H~~~V~~vafsP~d~~~l~s~s 331 (357)
T 4g56_B 304 -------VFRD--LSHRDFVTGVAWSPLDHSKFTTVG 331 (357)
T ss_dssp -------EEEE--CCCSSCEEEEEECSSSTTEEEEEE
T ss_pred -------EeEE--CCCCCCEEEEEEeCCCCCEEEEEc
Confidence 3433 37999999999999 788886654
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-38 Score=327.91 Aligned_cols=278 Identities=19% Similarity=0.282 Sum_probs=244.6
Q ss_pred CcccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 1 ~~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
|...++|++|.+.|++++|+|++++|++++.||.|+|||+.+++.+..+
T Consensus 3 l~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~------------------------------- 51 (814)
T 3mkq_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSI------------------------------- 51 (814)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE-------------------------------
T ss_pred cccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEE-------------------------------
Confidence 4567899999999999999999999999999999999999877655443
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
.+|..+|.+++|+|++++|++++.||.|++||+.+++ ....+.+|...|.+++|+|++++|++++.||.|++
T Consensus 52 ------~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v 123 (814)
T 3mkq_A 52 ------QVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE--KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKL 123 (814)
T ss_dssp ------ECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred ------ecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--EEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEE
Confidence 4688999999999999999999999999999999986 66778899999999999999999999999999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeec-CCCccEEEEEEcc--C
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLK-SHTSTVWSLAFDR--I 236 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~~v~~~~~~~--~ 236 (479)
||+++.. .....+..|...|.+++|+| +++.|++++.||.|++||++.+.. ...+. .+...+.+++|+| +
T Consensus 124 w~~~~~~--~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~----~~~~~~~~~~~v~~~~~~~~~~ 197 (814)
T 3mkq_A 124 WNWENNW--ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP----NFTLTTGQERGVNYVDYYPLPD 197 (814)
T ss_dssp EEGGGTS--EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSC----SEEEECCCTTCCCEEEECCSTT
T ss_pred EECCCCc--eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc----eeEEecCCCCCEEEEEEEECCC
Confidence 9998763 45567788999999999999 889999999999999999987664 23333 3458899999999 9
Q ss_pred CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 237 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 237 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+.+|++++.||.|++||+.. ..++..+.+| ...|.+++|+|+++++++++.||.|++||+.+++
T Consensus 198 ~~~l~~~~~dg~i~~~d~~~---------------~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 198 KPYMITASDDLTIKIWDYQT---------------KSCVATLEGH-MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261 (814)
T ss_dssp CCEEEEECTTSEEEEEETTT---------------TEEEEEEECC-SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCS
T ss_pred CCEEEEEeCCCEEEEEECCC---------------CcEEEEEcCC-CCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 99999999999999999843 3567778876 7899999999999999999999999999999887
Q ss_pred CCCCceeeEEEeccccccccceeEEEecCCCCC
Q psy14815 317 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPE 349 (479)
Q Consensus 317 ~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 349 (479)
.......|...+.+++|+|+++.
T Consensus 262 ----------~~~~~~~~~~~v~~~~~~~~~~~ 284 (814)
T 3mkq_A 262 ----------VEKTLNVGLERSWCIATHPTGRK 284 (814)
T ss_dssp ----------EEEEECCSSSSEEEEEECTTCGG
T ss_pred ----------EEEEeecCCCcEEEEEEccCCCc
Confidence 33444678889999999999974
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-39 Score=305.97 Aligned_cols=261 Identities=18% Similarity=0.244 Sum_probs=209.4
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccc--cccccccCCCccceEEEeecCCcEEEecCCCCCCce
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIR--EPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKF 79 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~ 79 (479)
.....++.|.++|++++|+|++++|++|+.||.|++||+.++ +.+..+
T Consensus 2 ~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~------------------------------ 51 (377)
T 3dwl_C 2 ATSQVLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTF------------------------------ 51 (377)
T ss_dssp CCEEEEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCB------------------------------
T ss_pred CcceeEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEE------------------------------
Confidence 344556678899999999999999999999999999998766 333322
Q ss_pred eeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCe-EEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcE
Q psy14815 80 TAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ-FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 158 (479)
Q Consensus 80 ~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i 158 (479)
.+|...|.+++|+|++++|++++.|+.|++||+.+++ ......+..|...|.+++|+|++++|++++.|+.|
T Consensus 52 -------~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 124 (377)
T 3dwl_C 52 -------SDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVI 124 (377)
T ss_dssp -------CCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCE
T ss_pred -------ecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeE
Confidence 5789999999999999999999999999999999875 34566778899999999999999999999999999
Q ss_pred EEEEeCCCCceeeeeeeec-cccceeEEEEecCCCEEEEEEcCCcEEEEecCCcc--------------cceEeeeeecC
Q psy14815 159 WVWEVGEEDEYECAAVINA-HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE--------------ADWINFATLKS 223 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~--------------~~~~~~~~~~~ 223 (479)
++||++..+.......+.. |...|++++|+|++++|++++.|+.|++||++... .....+..+ .
T Consensus 125 ~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 203 (377)
T 3dwl_C 125 SVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-P 203 (377)
T ss_dssp EECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-C
T ss_pred EEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-c
Confidence 9999998754445666777 99999999999999999999999999999986322 112345555 8
Q ss_pred CCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeC
Q psy14815 224 HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 303 (479)
Q Consensus 224 ~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~ 303 (479)
|...|.+++|+|++++|++++.||.|++||+...... ...+..+.+| ..+|.+++|+|++++|++++.
T Consensus 204 ~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~-----------~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~ 271 (377)
T 3dwl_C 204 SGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQP-----------PRALITVKLS-QLPLRSLLWANESAIVAAGYN 271 (377)
T ss_dssp CSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSC-----------EEECCCEECS-SSCEEEEEEEETTEEEEEESS
T ss_pred CCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCc-----------ceeeEeecCC-CCceEEEEEcCCCCEEEEEcC
Confidence 9999999999999999999999999999999765431 1224566676 789999999999999999987
Q ss_pred CCeEEEcccC
Q psy14815 304 DDAIRIFKEN 313 (479)
Q Consensus 304 dg~i~vw~~~ 313 (479)
++.+ +|+..
T Consensus 272 ~~~~-~~~~~ 280 (377)
T 3dwl_C 272 YSPI-LLQGN 280 (377)
T ss_dssp SSEE-EECCC
T ss_pred CcEE-EEEeC
Confidence 7666 66554
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=283.87 Aligned_cols=274 Identities=18% Similarity=0.233 Sum_probs=232.0
Q ss_pred ccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccc---------------cCCCccceEEEeecCCcEEEec
Q psy14815 7 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKL---------------HGLPVETSLRQLVEDKNIRLWG 71 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~i~~w~ 71 (479)
..+|.+.|++++|+|++++|++++ ||.|++||+.+++....+ ...+++..+++++.++.+++|+
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 125 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWD 125 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEE
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEE
Confidence 347999999999999999999999 999999999876543322 2235667788889999999999
Q ss_pred CCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEE
Q psy14815 72 KESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT 151 (479)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~ 151 (479)
++.... ........|...|.+++|+|+++++++++.||.|++||+++++ ....+..|...+.+++|+|++++|++
T Consensus 126 ~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~ 200 (337)
T 1gxr_A 126 LAAPTP---RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT--LVRQFQGHTDGASCIDISNDGTKLWT 200 (337)
T ss_dssp CCCC-----EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred CCCCCc---ceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc--eeeeeecccCceEEEEECCCCCEEEE
Confidence 985331 1222346788999999999999999999999999999999986 66788889999999999999999999
Q ss_pred EeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEE
Q psy14815 152 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSL 231 (479)
Q Consensus 152 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~ 231 (479)
++.||.|++||+++.+ ....+ .+...+.+++|+|+++++++++.++.|++||+++.. ...+..|...|.++
T Consensus 201 ~~~dg~i~~~d~~~~~---~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~v~~~ 271 (337)
T 1gxr_A 201 GGLDNTVRSWDLREGR---QLQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD-----KYQLHLHESCVLSL 271 (337)
T ss_dssp EETTSEEEEEETTTTE---EEEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC-----EEEECCCSSCEEEE
T ss_pred EecCCcEEEEECCCCc---eEeee-cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC-----eEEEcCCccceeEE
Confidence 9999999999999873 33333 467789999999999999999999999999999765 34567899999999
Q ss_pred EEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcc
Q psy14815 232 AFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 232 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~ 311 (479)
+|+|++++|++++.||.|++||+.... .+... . +...|.+++|+|++++|++++.||.|++|+
T Consensus 272 ~~~~~~~~l~~~~~dg~i~~~~~~~~~---------------~~~~~-~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 334 (337)
T 1gxr_A 272 KFAYCGKWFVSTGKDNLLNAWRTPYGA---------------SIFQS-K-ESSSVLSCDISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCC---------------EEEEE-E-CSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred EECCCCCEEEEecCCCcEEEEECCCCe---------------EEEEe-c-CCCcEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 999999999999999999999985432 22222 2 377899999999999999999999999998
Q ss_pred c
Q psy14815 312 E 312 (479)
Q Consensus 312 ~ 312 (479)
+
T Consensus 335 ~ 335 (337)
T 1gxr_A 335 V 335 (337)
T ss_dssp E
T ss_pred E
Confidence 6
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-37 Score=284.04 Aligned_cols=278 Identities=21% Similarity=0.272 Sum_probs=235.8
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC----------CCccceEEEeecCCcEEEec
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG----------LPVETSLRQLVEDKNIRLWG 71 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~w~ 71 (479)
.+.++|++|.+.|++++| |++++|++|+.||.|++||+.+++....+.. .+.+..+++++.++.+++|+
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 87 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVP 87 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 467889999999999999 9999999999999999999988766554443 35677889999999999999
Q ss_pred CCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEE
Q psy14815 72 KESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLA 150 (479)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~ 150 (479)
+......... ....+|...|.+++| +++++++++.||.|++|| .++ ....+..|...+.++.|+| +++.++
T Consensus 88 ~~~~~~~~~~--~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~ 159 (313)
T 3odt_A 88 LFATSGEDPL--YTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGS--LVYNLQAHNASVWDAKVVSFSENKFL 159 (313)
T ss_dssp TTCCTTSCC---CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTE--EEEEEECCSSCEEEEEEEETTTTEEE
T ss_pred eeecCCCCcc--cchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCc--EEEecccCCCceeEEEEccCCCCEEE
Confidence 8854322222 223689999999999 578999999999999999 443 5677888999999999998 899999
Q ss_pred EEeCCCcEEEEEeCCCCceeeeeeeec-cccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEE
Q psy14815 151 TCSRDKSVWVWEVGEEDEYECAAVINA-HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW 229 (479)
Q Consensus 151 ~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~ 229 (479)
+++.||.|++||.. .....+.. |...+.+++|+|++. +++++.||.|++||+++++. +..+..|...|+
T Consensus 160 ~~~~d~~i~i~d~~-----~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~i~ 229 (313)
T 3odt_A 160 TASADKTIKLWQND-----KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDV----LRTYEGHESFVY 229 (313)
T ss_dssp EEETTSCEEEEETT-----EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCE----EEEEECCSSCEE
T ss_pred EEECCCCEEEEecC-----ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhh----hhhhhcCCceEE
Confidence 99999999999933 33445555 889999999999988 99999999999999997653 677888999999
Q ss_pred EEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEE
Q psy14815 230 SLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 309 (479)
Q Consensus 230 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~v 309 (479)
+++|+|++ .|++++.||.|++||+... +++..+..| ..+|.+++|+|+++ +++++.||.|++
T Consensus 230 ~~~~~~~~-~l~~~~~dg~v~iwd~~~~---------------~~~~~~~~~-~~~i~~~~~~~~~~-~~~~~~dg~i~i 291 (313)
T 3odt_A 230 CIKLLPNG-DIVSCGEDRTVRIWSKENG---------------SLKQVITLP-AISIWSVDCMSNGD-IIVGSSDNLVRI 291 (313)
T ss_dssp EEEECTTS-CEEEEETTSEEEEECTTTC---------------CEEEEEECS-SSCEEEEEECTTSC-EEEEETTSCEEE
T ss_pred EEEEecCC-CEEEEecCCEEEEEECCCC---------------ceeEEEecc-CceEEEEEEccCCC-EEEEeCCCcEEE
Confidence 99999999 6889999999999998543 456777776 77999999999998 567899999999
Q ss_pred cccCCCC
Q psy14815 310 FKENPEA 316 (479)
Q Consensus 310 w~~~~~~ 316 (479)
|++..++
T Consensus 292 w~~~~~~ 298 (313)
T 3odt_A 292 FSQEKSR 298 (313)
T ss_dssp EESCGGG
T ss_pred EeCCCCc
Confidence 9999876
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-37 Score=288.10 Aligned_cols=277 Identities=19% Similarity=0.289 Sum_probs=224.4
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
.+.+++|.+.|++++|+|++++|++|+.||+|++||+.++..... ..
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~---------------------------------~~ 50 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWE---------------------------------LS 50 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEE---------------------------------EE
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcce---------------------------------ec
Confidence 466789999999999999999999999999999999875432111 11
Q ss_pred EeccccCCcEEEEEECC--CCCEEEEEECCCeEEEEECCCCeE-------EEeEEEeCCCCcEEEEEEcCC--CCEEEEE
Q psy14815 84 ILSDGHQRTIRETAWSP--CGNFIASASFDATTAVWDKRSGQF-------ECNATLEGHENEVKSVTWSKN--GQFLATC 152 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~--~~~~l~t~~~dg~i~iwd~~~~~~-------~~~~~~~~~~~~v~~l~~~~~--~~~l~~~ 152 (479)
....+|...|++++|+| ++++|++++.||.|++||+++++. .....+..|...|.+++|+|+ +++|+++
T Consensus 51 ~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ 130 (351)
T 3f3f_A 51 DSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACL 130 (351)
T ss_dssp EEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEE
T ss_pred ceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEe
Confidence 12357999999999999 699999999999999999987632 357788899999999999999 9999999
Q ss_pred eCCCcEEEEEeCCCCceeeee----------eeeccccceeEEEEecC---CCEEEEEEcCCcEEEEecCCcccceEeee
Q psy14815 153 SRDKSVWVWEVGEEDEYECAA----------VINAHIQDVKKVRFHPF---DNILASASYDDTVKLFKEDKAEADWINFA 219 (479)
Q Consensus 153 ~~dg~i~vwd~~~~~~~~~~~----------~~~~~~~~v~~l~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 219 (479)
+.||.|++||+++.+...... ....|...+.+++|+|+ +..+++++.++.+.+|+...+.. ....
T Consensus 131 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~ 208 (351)
T 3f3f_A 131 GNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL--HVAA 208 (351)
T ss_dssp ETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCE--EEEE
T ss_pred cCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCce--eeee
Confidence 999999999998875322211 11257778999999997 89999999999998888776543 4567
Q ss_pred eecCCCccEEEEEEccCC----CEEEEeeCCCeEEEEeccCCCCCCCCCC------------------------------
Q psy14815 220 TLKSHTSTVWSLAFDRIG----SRLATCSDDATVKIWKEYKPGNSAGIPT------------------------------ 265 (479)
Q Consensus 220 ~~~~~~~~v~~~~~~~~~----~~l~s~~~dg~i~iwd~~~~~~~~~~~~------------------------------ 265 (479)
.+.+|...|++++|+|++ ++|++++.||.|++||++..........
T Consensus 209 ~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (351)
T 3f3f_A 209 KLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKA 288 (351)
T ss_dssp ECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-------------------------------------
T ss_pred ecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceee
Confidence 788899999999999998 8999999999999999986532211100
Q ss_pred -CCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 266 -PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 266 -~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
........++..+.+| ...|++++|+|++++|++++.||.|++|++.+++
T Consensus 289 ~~~~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 289 ELQSNLQVELLSEHDDH-NGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp --CCSEEEEEEEEECTT-SSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred eecccccccEEEEEecc-cccEEEEEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence 0011234667778886 7899999999999999999999999999999875
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=307.67 Aligned_cols=315 Identities=15% Similarity=0.165 Sum_probs=249.5
Q ss_pred cccccccccccc-eEEEEECC--CCCeEEEeeCCCcEEEEecccc--------cccccccC----------CCccceEEE
Q psy14815 2 INSQTLKGHQGR-VWNVSWNP--QGTMISSCGEDKNIRLWVMVIR--------EPYEKLHG----------LPVETSLRQ 60 (479)
Q Consensus 2 ~~~~~l~~h~~~-V~~l~~s~--~~~~l~t~~~dg~v~iwd~~~~--------~~~~~~~~----------~~~~~~~~~ 60 (479)
.+.+.+.+|.+. |++++|+| ++++|++|+.||+|++||+.++ .....+.. .+++..+++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 133 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 133 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEE
Confidence 456788999999 99999999 9999999999999999999754 34434332 355667777
Q ss_pred eecC----CcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCC-EEEEEECCCeEEEEECCCCeEEEeEEEeCCCC
Q psy14815 61 LVED----KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGN-FIASASFDATTAVWDKRSGQFECNATLEGHEN 135 (479)
Q Consensus 61 ~~~~----~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 135 (479)
++.+ +.+.+|+... ......+|...|.+++|+|+++ .+++++.|+.|++||+.+++ ....+..|..
T Consensus 134 ~~~~~~~~~~v~~~d~~~-------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~--~~~~~~~~~~ 204 (615)
T 1pgu_A 134 VGEGRDNFGVFISWDSGN-------SLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK--FSASDRTHHK 204 (615)
T ss_dssp EECCSSCSEEEEETTTCC-------EEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE--EEEEECSSSC
T ss_pred eccCCCCccEEEEEECCC-------cceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc--eeeeecccCC
Confidence 7766 6899998431 2233468999999999999997 89999999999999999886 6678888998
Q ss_pred ---cEEEEEEcCC-CCEEEEEeCCCcEEEEEeCCCCceeeeeee-e---ccccceeEEEEecCCCEEEEEEcCCcEEEEe
Q psy14815 136 ---EVKSVTWSKN-GQFLATCSRDKSVWVWEVGEEDEYECAAVI-N---AHIQDVKKVRFHPFDNILASASYDDTVKLFK 207 (479)
Q Consensus 136 ---~v~~l~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~---~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d 207 (479)
.|.+++|+|+ +++|++++.||.|++||++++ +....+ . .|...|.+++|+ ++++|++++.||.|++||
T Consensus 205 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~---~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd 280 (615)
T 1pgu_A 205 QGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG---EFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWD 280 (615)
T ss_dssp TTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTC---CEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEE
T ss_pred CCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCC---CEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEE
Confidence 9999999999 999999999999999999887 444555 4 789999999999 999999999999999999
Q ss_pred cCCcccc-----------------------------------------eEee----------------------------
Q psy14815 208 EDKAEAD-----------------------------------------WINF---------------------------- 218 (479)
Q Consensus 208 ~~~~~~~-----------------------------------------~~~~---------------------------- 218 (479)
+++++.. ...+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~ 360 (615)
T 1pgu_A 281 VTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIM 360 (615)
T ss_dssp TTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEE
T ss_pred CCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEE
Confidence 8743210 0000
Q ss_pred --------------------------------------------------------------------------------
Q psy14815 219 -------------------------------------------------------------------------------- 218 (479)
Q Consensus 219 -------------------------------------------------------------------------------- 218 (479)
T Consensus 361 ~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (615)
T 1pgu_A 361 EWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDII 440 (615)
T ss_dssp ETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCcee
Confidence
Q ss_pred -----------------------------------------eeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCC
Q psy14815 219 -----------------------------------------ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 257 (479)
Q Consensus 219 -----------------------------------------~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 257 (479)
..+..|...|++++|+|++++|++++.||.|++||+.
T Consensus 441 ~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~-- 518 (615)
T 1pgu_A 441 KSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQ-- 518 (615)
T ss_dssp EEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT--
T ss_pred eecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCC--
Confidence 1122355566666666666666666666667777663
Q ss_pred CCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC----------CCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEE
Q psy14815 258 GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH----------LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLV 327 (479)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~----------~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~ 327 (479)
..+++..+.+.|...|++++|+| ++++|++++.||.|++||+..+. ..
T Consensus 519 -------------~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~---------~~ 576 (615)
T 1pgu_A 519 -------------SREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM---------KI 576 (615)
T ss_dssp -------------TTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT---------CC
T ss_pred -------------CCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCc---------ee
Confidence 23556666662488999999999 99999999999999999999873 13
Q ss_pred eccccccccceeEEEecCCCCCCCccc
Q psy14815 328 HTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 328 ~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
...+.+|...|++++|+|+++ |+.++
T Consensus 577 ~~~~~~h~~~v~~l~~s~~~~-l~s~~ 602 (615)
T 1pgu_A 577 IKALNAHKDGVNNLLWETPST-LVSSG 602 (615)
T ss_dssp EEETTSSTTCEEEEEEEETTE-EEEEE
T ss_pred chhhhcCccceEEEEEcCCCC-eEEec
Confidence 334578999999999999999 76553
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-37 Score=288.10 Aligned_cols=270 Identities=16% Similarity=0.190 Sum_probs=227.2
Q ss_pred cccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCe----
Q psy14815 48 KLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ---- 123 (479)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~---- 123 (479)
.+...+++..+++++.|+++++||....... .....|...|.+++|+|++.++++|+.|+.+++|++....
T Consensus 69 ~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~-----~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~ 143 (354)
T 2pbi_B 69 CMDWCKDKRRIVSSSQDGKVIVWDSFTTNKE-----HAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENM 143 (354)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTCCEE-----EEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCS
T ss_pred EEEECCCCCEEEEEeCCCeEEEEECCCCCcc-----eEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccc
Confidence 3444567788999999999999998743221 1224678899999999999999999999999999986431
Q ss_pred EEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEec--CCCEEEEEEcCC
Q psy14815 124 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP--FDNILASASYDD 201 (479)
Q Consensus 124 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~~~~~dg 201 (479)
......+..|...|.++.|+|++..|++++.||+|++||++++ +.+..+.+|...|.+++|+| ++++|++|+.||
T Consensus 144 ~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg 220 (354)
T 2pbi_B 144 AAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG---QLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDK 220 (354)
T ss_dssp GGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC---CEEEEEECCSSCEEEEEECCCSSCCEEEEEETTS
T ss_pred cccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC---eEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCC
Confidence 1234566789999999999999999999999999999999987 56677889999999999988 468999999999
Q ss_pred cEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc
Q psy14815 202 TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH 281 (479)
Q Consensus 202 ~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (479)
.|++||++++.. +..+..|...|++++|+|++++|++++.|++|++||++.. ..+..+..+
T Consensus 221 ~v~~wd~~~~~~----~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~---------------~~~~~~~~~ 281 (354)
T 2pbi_B 221 KAMVWDMRSGQC----VQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD---------------REVAIYSKE 281 (354)
T ss_dssp CEEEEETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT---------------EEEEEECCT
T ss_pred eEEEEECCCCcE----EEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC---------------cEEEEEcCC
Confidence 999999997653 6778899999999999999999999999999999998543 333444332
Q ss_pred -ccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 282 -HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 282 -~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
....+.+++|+|++++|++|+.|+.|++||+.+++ ....+.+|...|++++|+|++++|++++
T Consensus 282 ~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~----------~~~~l~~h~~~v~~l~~spdg~~l~sgs 345 (354)
T 2pbi_B 282 SIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS----------RVSILFGHENRVSTLRVSPDGTAFCSGS 345 (354)
T ss_dssp TCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS----------EEEEECCCSSCEEEEEECTTSSCEEEEE
T ss_pred CcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc----------eEEEEECCCCcEEEEEECCCCCEEEEEc
Confidence 24578999999999999999999999999998877 3334468999999999999999998765
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-37 Score=288.21 Aligned_cols=303 Identities=15% Similarity=0.172 Sum_probs=235.7
Q ss_pred cccccccccceEEEEECCCCCeE-EEeeC---CCcEEEEeccccccccc-----------ccCCCc---cceEEEeecCC
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMI-SSCGE---DKNIRLWVMVIREPYEK-----------LHGLPV---ETSLRQLVEDK 65 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l-~t~~~---dg~v~iwd~~~~~~~~~-----------~~~~~~---~~~~~~~~~~~ 65 (479)
.+.+++|.+.|++++|+|+++.+ ++|+. ||.|++||+.+++.... +...+. +..+++++.++
T Consensus 11 ~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 11 AHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS
T ss_pred hhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCC
Confidence 34567899999999999999655 56665 99999999988765322 222344 57889999999
Q ss_pred cEEEecCCCCCCceeeeEEeccccCCcEEEEE------ECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCC----
Q psy14815 66 NIRLWGKESFGNKFTAKAILSDGHQRTIRETA------WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHEN---- 135 (479)
Q Consensus 66 ~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~------~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~---- 135 (479)
.+++|++...... .....+|...|.+++ |+|++++|++++.||.|++||+++++ .....+..|.+
T Consensus 91 ~i~iwd~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~ 165 (357)
T 3i2n_A 91 NLHIWNLEAPEMP----VYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD-DPVANMEPVQGENKR 165 (357)
T ss_dssp CEEEECTTSCSSC----SEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS-SCSEEECCCTTSCCC
T ss_pred eEEEEeCCCCCcc----EEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC-CcceeccccCCCCCC
Confidence 9999999854311 122358999999995 57899999999999999999999875 13455655544
Q ss_pred cEEEEE----EcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEec---CCCEEEEEEcCCcEEEEec
Q psy14815 136 EVKSVT----WSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP---FDNILASASYDDTVKLFKE 208 (479)
Q Consensus 136 ~v~~l~----~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~~~l~~~~~dg~i~i~d~ 208 (479)
.+.++. |+|+++++++++.||.|++||+++.+ . .....|...|.+++|+| ++++|++++.||.|++||+
T Consensus 166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~---~-~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 241 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMA---L-RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241 (357)
T ss_dssp CEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTE---E-EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEE
T ss_pred ceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCc---e-eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeC
Confidence 899998 67899999999999999999999873 2 33466788999999999 8999999999999999999
Q ss_pred CCcccceE-eeeeecCCCccEEEEEEccCCC-EEEEeeCCCeEEEEeccCCCCCCCCCCC----CCCCceEEEEEEeccc
Q psy14815 209 DKAEADWI-NFATLKSHTSTVWSLAFDRIGS-RLATCSDDATVKIWKEYKPGNSAGIPTP----DNDSVWKCVCTLSGHH 282 (479)
Q Consensus 209 ~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 282 (479)
++...... ....+..|...|++++|+|+++ +|++++.||.|++||++........... .......++..+.+|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~- 320 (357)
T 3i2n_A 242 RTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLS- 320 (357)
T ss_dssp EEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECC-
T ss_pred cCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccC-
Confidence 86553211 1123448999999999999998 8999999999999999876544322111 111244678888887
Q ss_pred cccEEEEEecCCCCeEE-EEeCCCeEEEcccCCCC
Q psy14815 283 GRTIYDISWCHLTDLIA-TACGDDAIRIFKENPEA 316 (479)
Q Consensus 283 ~~~i~~l~~~~~~~~l~-~~~~dg~i~vw~~~~~~ 316 (479)
..+|++++|+|++++|+ +++.||.|++|++...+
T Consensus 321 ~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 321 TQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp SSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred CCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 88999999999999998 89999999999998754
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-36 Score=293.82 Aligned_cols=302 Identities=23% Similarity=0.368 Sum_probs=253.9
Q ss_pred ccccccccccce-EEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCc--------cceEEEeecCCcEEEecCC
Q psy14815 3 NSQTLKGHQGRV-WNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPV--------ETSLRQLVEDKNIRLWGKE 73 (479)
Q Consensus 3 ~~~~l~~h~~~V-~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~w~~~ 73 (479)
..+.|++|.+.| +|+. +++++|++|+.||+|++||+.+++.+..+..+.. +..+++++.|+.+++||+.
T Consensus 110 ~~~~l~~h~~~v~~~~~--~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~ 187 (445)
T 2ovr_B 110 SPKVLKGHDDHVITCLQ--FCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAE 187 (445)
T ss_dssp CCEEEECSTTSCEEEEE--EETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETT
T ss_pred eeEEecccCCCcEEEEE--EcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECC
Confidence 456789999875 5554 4689999999999999999999998888876643 4578888999999999998
Q ss_pred CCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe
Q psy14815 74 SFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS 153 (479)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~ 153 (479)
... ......+|...|.+++|+ ++.+++|+.||.|++||+.+++ ....+.+|...|.++.| +++++++|+
T Consensus 188 ~~~-----~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~ 256 (445)
T 2ovr_B 188 TGE-----CIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQ--CLHVLMGHVAAVRCVQY--DGRRVVSGA 256 (445)
T ss_dssp TTE-----EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCC--EEEEEECCSSCEEEEEE--CSSCEEEEE
T ss_pred cCc-----EEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCc--EEEEEcCCcccEEEEEE--CCCEEEEEc
Confidence 421 122346899999999995 5789999999999999999986 66788899999999999 688999999
Q ss_pred CCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEE
Q psy14815 154 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF 233 (479)
Q Consensus 154 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~ 233 (479)
.||.|++||+++. .....+..|...|.+++| +++++++++.||.|++||+++++. +..+.+|...+.++.+
T Consensus 257 ~dg~i~iwd~~~~---~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~v~~~~~ 327 (445)
T 2ovr_B 257 YDFMVKVWDPETE---TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNC----IHTLTGHQSLTSGMEL 327 (445)
T ss_dssp TTSCEEEEEGGGT---EEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCE----EEEECCCCSCEEEEEE
T ss_pred CCCEEEEEECCCC---cEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCE----EEEEcCCcccEEEEEE
Confidence 9999999999987 667778889999999999 689999999999999999997664 6778899999998887
Q ss_pred ccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc--ccccEEEEEecCCCCeEEEEeCCCeEEEcc
Q psy14815 234 DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH--HGRTIYDISWCHLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 234 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~ 311 (479)
+ ++++++++.||.|++||++.. +++..+.++ +..+|.+++|+ +++|++|+.||.|++||
T Consensus 328 ~--~~~l~~~~~dg~i~vwd~~~~---------------~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd 388 (445)
T 2ovr_B 328 K--DNILVSGNADSTVKIWDIKTG---------------QCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWD 388 (445)
T ss_dssp E--TTEEEEEETTSCEEEEETTTC---------------CEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEE
T ss_pred e--CCEEEEEeCCCeEEEEECCCC---------------cEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEE
Confidence 5 679999999999999998543 446666652 47789999995 57999999999999999
Q ss_pred cCCCCCCCCceeeEEEecc----ccccccceeEEEecCCCCCCCccc
Q psy14815 312 ENPEAGDSDMVSFDLVHTE----HRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~----~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+.+++ .+..+ ..+|.+.|++++|+|++.+++.+.
T Consensus 389 ~~~~~---------~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~ 426 (445)
T 2ovr_B 389 LKTGE---------FIRNLVTLESGGSGGVVWRIRASNTKLVCAVGS 426 (445)
T ss_dssp TTTCC---------EEEEEEECTTGGGTCEEEEEEECSSEEEEEEEC
T ss_pred CCCCc---------eeeeeeccccCCCCceEEEEEecCCEEEEEEcc
Confidence 99887 33322 247889999999999999887765
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=280.89 Aligned_cols=250 Identities=24% Similarity=0.489 Sum_probs=212.7
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
..+++.+|...|++++|+|++++|++|+.||.|++||+.+++.+..+
T Consensus 57 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~--------------------------------- 103 (312)
T 4ery_A 57 FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL--------------------------------- 103 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE---------------------------------
T ss_pred cchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEE---------------------------------
Confidence 35678899999999999999999999999999999999876654333
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd 162 (479)
.+|...|.+++|+|++++|++|+.|+.|++||+++++ ....+..|..+|.+++|+|++++|++++.||.|++||
T Consensus 104 ----~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd 177 (312)
T 4ery_A 104 ----KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK--CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 177 (312)
T ss_dssp ----ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ----cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE--EEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Confidence 4688999999999999999999999999999999886 5678889999999999999999999999999999999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEE---EEEEccCCCE
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW---SLAFDRIGSR 239 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~~~~ 239 (479)
+++.+.. ......+..++.+++|+|++++|++++.||.|++||+++++. +..+.+|..... .....+++.+
T Consensus 178 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (312)
T 4ery_A 178 TASGQCL--KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC----LKTYTGHKNEKYCIFANFSVTGGKW 251 (312)
T ss_dssp TTTCCEE--EEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEE----EEEECSSCCSSSCCCEEEECSSSCE
T ss_pred CCCCcee--eEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcE----EEEEEecCCceEEEEEEEEeCCCcE
Confidence 9987422 222345667899999999999999999999999999987653 566666665432 2233467889
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe--CCCeEEEcccC
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC--GDDAIRIFKEN 313 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~--~dg~i~vw~~~ 313 (479)
|++|+.||.|++||+... +.+..+.+| ...|.+++|+|+++++++++ .|+.|++|+.+
T Consensus 252 l~sg~~dg~i~vwd~~~~---------------~~~~~~~~h-~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 252 IVSGSEDNLVYIWNLQTK---------------EIVQKLQGH-TDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEECCTTSCEEEEETTTC---------------CEEEEECCC-SSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EEEECCCCEEEEEECCCc---------------hhhhhhhcc-CCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 999999999999998443 457788887 78999999999999999987 69999999864
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-36 Score=296.10 Aligned_cols=296 Identities=21% Similarity=0.333 Sum_probs=248.6
Q ss_pred cccccccccce-EEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCC---------ccceEEEeecCCcEEEecCC
Q psy14815 4 SQTLKGHQGRV-WNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLP---------VETSLRQLVEDKNIRLWGKE 73 (479)
Q Consensus 4 ~~~l~~h~~~V-~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~---------~~~~~~~~~~~~~i~~w~~~ 73 (479)
..+|++|.+.| +++.+ ++++|++|+.||+|++||+.+++.+..+..+. .+..+++++.|+++++||++
T Consensus 114 ~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~ 191 (464)
T 3v7d_B 114 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIK 191 (464)
T ss_dssp EEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETT
T ss_pred eEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECC
Confidence 46789999885 66666 57799999999999999999998888777652 23378899999999999998
Q ss_pred CCCCceeeeEEeccccCCcEEEEEEC--CCCCEEEEEECCCeEEEEECCCCeEE---------------------EeEEE
Q psy14815 74 SFGNKFTAKAILSDGHQRTIRETAWS--PCGNFIASASFDATTAVWDKRSGQFE---------------------CNATL 130 (479)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~v~~v~~~--~~~~~l~t~~~dg~i~iwd~~~~~~~---------------------~~~~~ 130 (479)
... ......+|...|.+++|+ +++.++++|+.||.|++||+.+++.. ....+
T Consensus 192 ~~~-----~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (464)
T 3v7d_B 192 KGC-----CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL 266 (464)
T ss_dssp TTE-----EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE
T ss_pred CCc-----EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc
Confidence 422 222346899999999998 57899999999999999999876422 14567
Q ss_pred eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCC
Q psy14815 131 EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK 210 (479)
Q Consensus 131 ~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~ 210 (479)
.+|...+.++ +++++++++|+.||.|++||+++. ..+..+.+|...|.+++|+|+++++++|+.||.|++||+++
T Consensus 267 ~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 341 (464)
T 3v7d_B 267 RGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQM---KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLEN 341 (464)
T ss_dssp CCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT
T ss_pred cCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCC---cEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Confidence 7888888887 567899999999999999999987 66777888999999999999999999999999999999987
Q ss_pred cccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEE
Q psy14815 211 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS 290 (479)
Q Consensus 211 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 290 (479)
++ .+..+.+|...|.++.|+ +++|++++.||.|++||+.... ..... ++...+..++
T Consensus 342 ~~----~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~---------------~~~~~--~~~~~~~~~~ 398 (464)
T 3v7d_B 342 GE----LMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYS---------------RKFSY--HHTNLSAITT 398 (464)
T ss_dssp TE----EEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC---------------EEEEE--ECTTCCCEEE
T ss_pred Cc----EEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCc---------------eeeee--cCCCCccEEE
Confidence 65 477888999999999998 5799999999999999986432 12222 3466788899
Q ss_pred ecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEec
Q psy14815 291 WCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN 344 (479)
Q Consensus 291 ~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s 344 (479)
|+++++++++++ ||.|++||+.+++ ++......|...|.+++|+
T Consensus 399 ~~~~~~~l~~~~-dg~i~iwd~~~g~---------~~~~~~~~~~~~v~~v~~~ 442 (464)
T 3v7d_B 399 FYVSDNILVSGS-ENQFNIYNLRSGK---------LVHANILKDADQIWSVNFK 442 (464)
T ss_dssp EEECSSEEEEEE-TTEEEEEETTTCC---------EEESCTTTTCSEEEEEEEE
T ss_pred EEeCCCEEEEec-CCeEEEEECCCCc---------EEehhhccCCCcEEEEEec
Confidence 999999999998 8999999999998 5666567899999999997
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-37 Score=289.85 Aligned_cols=290 Identities=11% Similarity=0.008 Sum_probs=236.0
Q ss_pred CcccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 1 ~~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
|...+...+|.+.|++++|+|++++|++++.||.|++||+.+++...
T Consensus 1 m~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~--------------------------------- 47 (342)
T 1yfq_A 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNV--------------------------------- 47 (342)
T ss_dssp CEEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEE---------------------------------
T ss_pred CcceecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccc---------------------------------
Confidence 44566678999999999999999999999999999999987654211
Q ss_pred eeEEeccccCCcEEEEEECCCCC-EEEEEECCCeEEEEEC-CCCeEEEeEEEeC--CCCcEEEEEEcCCCCEEEEEeCCC
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGN-FIASASFDATTAVWDK-RSGQFECNATLEG--HENEVKSVTWSKNGQFLATCSRDK 156 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~-~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~l~~~~~dg 156 (479)
......+|...|.+++|+|+++ +|++|+.||.|++||+ .+++ ...+.+ |...|.+++|+| ++.+++++.||
T Consensus 48 -~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~---~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~ 122 (342)
T 1yfq_A 48 -DLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS---FQALTNNEANLGICRICKYG-DDKLIAASWDG 122 (342)
T ss_dssp -EEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS---EEECBSCCCCSCEEEEEEET-TTEEEEEETTS
T ss_pred -cceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCc---eEeccccCCCCceEEEEeCC-CCEEEEEcCCC
Confidence 0111247889999999999999 9999999999999999 8875 366778 999999999999 99999999999
Q ss_pred cEEEEEeCC---------CCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCC-cccceEeeeeecCCCc
Q psy14815 157 SVWVWEVGE---------EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK-AEADWINFATLKSHTS 226 (479)
Q Consensus 157 ~i~vwd~~~---------~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~ 226 (479)
.|++||+++ . .....+. |...+.+++|+|++ +++++.|+.|++||+++ ... ........|..
T Consensus 123 ~i~iwd~~~~~~~~~~~~~---~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~--~~~~~~~~~~~ 194 (342)
T 1yfq_A 123 LIEVIDPRNYGDGVIAVKN---LNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDD--NGTIEESGLKY 194 (342)
T ss_dssp EEEEECHHHHTTBCEEEEE---SCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTC--CCEEEECSCSS
T ss_pred eEEEEcccccccccccccC---CeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccc--cceeeecCCCC
Confidence 999999986 4 3333444 78899999999877 99999999999999997 443 12334456888
Q ss_pred cEEEEEEcc-CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccc--------cccEEEEEecCCCCe
Q psy14815 227 TVWSLAFDR-IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH--------GRTIYDISWCHLTDL 297 (479)
Q Consensus 227 ~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~i~~l~~~~~~~~ 297 (479)
.+.+++|+| +++++++++.||.|++|+++...... .......+..|. ...|.+++|+|++++
T Consensus 195 ~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 265 (342)
T 1yfq_A 195 QIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDY---------NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKF 265 (342)
T ss_dssp CEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCST---------TCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCC
T ss_pred ceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccc---------ccccceeeecccccccccccceeEEEEEEcCCCCE
Confidence 999999999 99999999999999999986651100 001134455541 348999999999999
Q ss_pred EEEEeCCCeEEEcccCCCCCCCCceeeEEEecccccc-ccceeEEEecCCCCCCCcccccH
Q psy14815 298 IATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH-NQDVNCVAWNPVVPEPQKTNLTL 357 (479)
Q Consensus 298 l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~sp~~~~l~~~~~~~ 357 (479)
|++++.||.|++||+.+++ ++.. +.+| ..+|++++ |++++|+.++...
T Consensus 266 l~~~~~dg~i~vwd~~~~~---------~~~~-~~~~h~~~v~~~~--~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 266 LYTAGSDGIISCWNLQTRK---------KIKN-FAKFNEDSVVKIA--CSDNILCLATSDD 314 (342)
T ss_dssp EEEEETTSCEEEEETTTTE---------EEEE-CCCCSSSEEEEEE--ECSSEEEEEEECT
T ss_pred EEEecCCceEEEEcCccHh---------Hhhh-hhcccCCCceEec--CCCCeEEEEecCC
Confidence 9999999999999999886 3434 4677 99999999 9999998877543
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=300.68 Aligned_cols=297 Identities=14% Similarity=0.243 Sum_probs=237.2
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEeccc----ccccccccCC----------Cc-cceEEEeecCCcEEEecCC
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVI----REPYEKLHGL----------PV-ETSLRQLVEDKNIRLWGKE 73 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~----~~~~~~~~~~----------~~-~~~~~~~~~~~~i~~w~~~ 73 (479)
.|...|++++|+|++++|++|+.||.|++||+.+ .+.+..+..+ +. +..+++++.|+.+++||+.
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 144 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMN 144 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTT
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECC
Confidence 5899999999999999999999999999999987 3344444433 44 6778888999999999998
Q ss_pred CCCCc----eeeeEEeccccCCcEEEEEECCC-CCEEEEEECCCeEEEEECCCCeEEEeEEEeCC------CCcEEEEEE
Q psy14815 74 SFGNK----FTAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEGH------ENEVKSVTW 142 (479)
Q Consensus 74 ~~~~~----~~~~~~~~~~~~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~v~~l~~ 142 (479)
..... ..........|...|.+++|+|+ +.++++++.|+.|++||+++++ ....+..+ ...|.+++|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~~~~~v~~~~~ 222 (416)
T 2pm9_A 145 KCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKK--EVIHLSYTSPNSGIKQQLSVVEW 222 (416)
T ss_dssp TTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTE--EEEEECCCCCSSCCCCCEEEEEE
T ss_pred CCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCC--cceEEeccccccccCCceEEEEE
Confidence 64411 11111123578999999999998 7899999999999999999986 45666655 789999999
Q ss_pred cCCC-CEEEEEeCCC---cEEEEEeCCCCceeeeeeee-ccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceE
Q psy14815 143 SKNG-QFLATCSRDK---SVWVWEVGEEDEYECAAVIN-AHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWI 216 (479)
Q Consensus 143 ~~~~-~~l~~~~~dg---~i~vwd~~~~~~~~~~~~~~-~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~ 216 (479)
+|++ .++++++.|+ .|++||+++.. .....+. .|...|++++|+| ++++|++++.||.|++||+++++.
T Consensus 223 ~~~~~~~l~~~~~d~~~~~i~~~d~~~~~--~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~--- 297 (416)
T 2pm9_A 223 HPKNSTRVATATGSDNDPSILIWDLRNAN--TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQ--- 297 (416)
T ss_dssp CSSCTTEEEEEECCSSSCCCCEEETTSTT--SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCE---
T ss_pred CCCCCCEEEEEECCCCCceEEEEeCCCCC--CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcc---
Confidence 9987 6899999998 99999999864 3445566 8999999999999 899999999999999999997653
Q ss_pred eeeeecCCCccEEEEEEccCC-CEEEEeeCCCeEEEEeccCCCCCCCCCCCC---C------------------CCceEE
Q psy14815 217 NFATLKSHTSTVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPTPD---N------------------DSVWKC 274 (479)
Q Consensus 217 ~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~------------------~~~~~~ 274 (479)
+..+..|...|.+++|+|++ .+|++++.|+.|++||+............. . ......
T Consensus 298 -~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (416)
T 2pm9_A 298 -LSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHL 376 (416)
T ss_dssp -EEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCC
T ss_pred -ceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccc
Confidence 67788999999999999999 899999999999999998765443221100 0 000000
Q ss_pred EEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCC
Q psy14815 275 VCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 275 ~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
..... +..++.+++|+|+|++|++++.|+.|+||++.+.
T Consensus 377 -~~~~~-~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 377 -QAPTW-YGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp -CCCST-TCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred -cCCcc-ccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 01111 3667889999999999999999999999998864
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-37 Score=334.22 Aligned_cols=330 Identities=20% Similarity=0.334 Sum_probs=265.4
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC----------CccceEEEeecCCcEEEecCC
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL----------PVETSLRQLVEDKNIRLWGKE 73 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~~i~~w~~~ 73 (479)
..++.+|.+.|++++|+|+|++|++|+.||+|++||+.+++.+..+..+ +++..+++++.|+.+++||+.
T Consensus 608 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~ 687 (1249)
T 3sfz_A 608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA 687 (1249)
T ss_dssp SEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred eEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC
Confidence 3457799999999999999999999999999999999999887776654 567788899999999999998
Q ss_pred CCCCceeeeEEeccccCCcEEEEEECC--CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEE
Q psy14815 74 SFGNKFTAKAILSDGHQRTIRETAWSP--CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT 151 (479)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~ 151 (479)
+.. ......+|...|.+++|+| ++.++++|+.|+.|++||+.+++ ....+.+|...|.+++|+|+++++++
T Consensus 688 ~~~-----~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~--~~~~~~~h~~~v~~~~~sp~~~~l~s 760 (1249)
T 3sfz_A 688 TGK-----LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE--CRNTMFGHTNSVNHCRFSPDDELLAS 760 (1249)
T ss_dssp TCC-----EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS--EEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred CCc-----eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc--hhheecCCCCCEEEEEEecCCCEEEE
Confidence 532 1222358999999999999 55689999999999999999987 67788899999999999999999999
Q ss_pred EeCCCcEEEEEeCCCCceeee----------------------------------------------------eeeeccc
Q psy14815 152 CSRDKSVWVWEVGEEDEYECA----------------------------------------------------AVINAHI 179 (479)
Q Consensus 152 ~~~dg~i~vwd~~~~~~~~~~----------------------------------------------------~~~~~~~ 179 (479)
++.||.|++||+++....... ....+|.
T Consensus 761 ~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~ 840 (1249)
T 3sfz_A 761 CSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHH 840 (1249)
T ss_dssp EESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSS
T ss_pred EECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCC
Confidence 999999999999765321111 0112677
Q ss_pred cceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCC
Q psy14815 180 QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 259 (479)
Q Consensus 180 ~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 259 (479)
..+.+++|+|+++++++++.||.|++||+.++. ....+.+|...|.+++|+|++++|++++.||.|++||+.....
T Consensus 841 ~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~----~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~ 916 (1249)
T 3sfz_A 841 STIQYCDFSPYDHLAVIALSQYCVELWNIDSRL----KVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCK 916 (1249)
T ss_dssp SCCCEEEECSSTTEEEEECSSSCEEEEETTTTE----EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHS
T ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc----eeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccce
Confidence 889999999999999999999999999999765 4677889999999999999999999999999999999764322
Q ss_pred CCCCCCCCCC-----CceEE---------EEEEe-------ccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCC
Q psy14815 260 SAGIPTPDND-----SVWKC---------VCTLS-------GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 318 (479)
Q Consensus 260 ~~~~~~~~~~-----~~~~~---------~~~~~-------~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 318 (479)
.......... ..... ..... ......+.+++|+|+++++++|+.||.|++|++.+++
T Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~-- 994 (1249)
T 3sfz_A 917 NSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNR-- 994 (1249)
T ss_dssp CCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTS--
T ss_pred eeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCc--
Confidence 1111000000 00000 00000 0124579999999999999999999999999999887
Q ss_pred CCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 319 SDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 319 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
......+|...|++++|+|++++|+.++
T Consensus 995 --------~~~~~~~h~~~v~~l~~s~dg~~l~s~~ 1022 (1249)
T 3sfz_A 995 --------VFSSGVGHKKAVRHIQFTADGKTLISSS 1022 (1249)
T ss_dssp --------CEEECCCCSSCCCCEEECSSSSCEEEEC
T ss_pred --------eeeecccCCCceEEEEECCCCCEEEEEc
Confidence 3344568999999999999999996653
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-37 Score=336.95 Aligned_cols=333 Identities=18% Similarity=0.259 Sum_probs=267.4
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCC------------ccceEEEeecCCcEEEe
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLP------------VETSLRQLVEDKNIRLW 70 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~------------~~~~~~~~~~~~~i~~w 70 (479)
++.++.+|.+.|++++|+|++++|++|+.||+|++||+.+++.+..+..+. ....+++++.|+.+++|
T Consensus 649 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vw 728 (1249)
T 3sfz_A 649 KLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLW 728 (1249)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEE
T ss_pred EEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEE
Confidence 457788999999999999999999999999999999999998887776542 33457788899999999
Q ss_pred cCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeE----------------------
Q psy14815 71 GKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNA---------------------- 128 (479)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~---------------------- 128 (479)
|+.... ......+|...|++++|+|+++++++++.||.|++||+.+++.....
T Consensus 729 d~~~~~-----~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 803 (1249)
T 3sfz_A 729 DLNQKE-----CRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKC 803 (1249)
T ss_dssp ETTSSS-----EEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCC
T ss_pred ECCCcc-----hhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEE
Confidence 998532 12224689999999999999999999999999999998776421111
Q ss_pred -------------------------------EEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeec
Q psy14815 129 -------------------------------TLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA 177 (479)
Q Consensus 129 -------------------------------~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 177 (479)
...+|...|.+++|+|++.++++++.||.|++||+.+. .....+.+
T Consensus 804 ~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~---~~~~~~~~ 880 (1249)
T 3sfz_A 804 CSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSR---LKVADCRG 880 (1249)
T ss_dssp CCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTT---EEEEEECC
T ss_pred EEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCC---ceeeecCC
Confidence 11267788999999999999999999999999999987 66677889
Q ss_pred cccceeEEEEecCCCEEEEEEcCCcEEEEecCCccc--------------------------------------------
Q psy14815 178 HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA-------------------------------------------- 213 (479)
Q Consensus 178 ~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~-------------------------------------------- 213 (479)
|...|++++|+|++++|++++.||.|++||+.+...
T Consensus 881 h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 960 (1249)
T 3sfz_A 881 HLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLP 960 (1249)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEEC
T ss_pred CccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcc
Confidence 999999999999999999999999999998642100
Q ss_pred -------------------------------ceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCC
Q psy14815 214 -------------------------------DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAG 262 (479)
Q Consensus 214 -------------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 262 (479)
.......+.+|...|++++|+|++++|++++.||.|++||+........
T Consensus 961 ~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~ 1040 (1249)
T 3sfz_A 961 EAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFL 1040 (1249)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECC
T ss_pred cCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEE
Confidence 0012334567889999999999999999999999999999876532211
Q ss_pred CCCCCC-------------------------CCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCC
Q psy14815 263 IPTPDN-------------------------DSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAG 317 (479)
Q Consensus 263 ~~~~~~-------------------------~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~ 317 (479)
...... ....++...+.+| ...|.+++|+|+++++++++.||.|++||+.+++
T Consensus 1041 ~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~- 1118 (1249)
T 3sfz_A 1041 QAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCH-QGTVLSCAISSDATKFSSTSADKTAKIWSFDLLS- 1118 (1249)
T ss_dssp BCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECC-SSCCCCEEECSSSSSCEEECCSSCCCEECSSSSS-
T ss_pred ecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEccc-CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcc-
Confidence 100000 0112234455565 7789999999999999999999999999999887
Q ss_pred CCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 318 DSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 318 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
......+|...|++++|+|++++|+.+.
T Consensus 1119 ---------~~~~l~~h~~~v~~~~~s~dg~~lat~~ 1146 (1249)
T 3sfz_A 1119 ---------PLHELKGHNGCVRCSAFSLDGILLATGD 1146 (1249)
T ss_dssp ---------CSBCCCCCSSCEEEEEECSSSSEEEEEE
T ss_pred ---------eeeeeccCCCcEEEEEECCCCCEEEEEe
Confidence 4445578999999999999999997654
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=302.80 Aligned_cols=259 Identities=12% Similarity=0.130 Sum_probs=205.8
Q ss_pred ccccc-cccccceEEEEECC-CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 3 NSQTL-KGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 3 ~~~~l-~~h~~~V~~l~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
++.++ ++|.+.|++++|+| ++++|++|+.||+|+|||+.+.+....+ .
T Consensus 54 ~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~------------------------------~ 103 (437)
T 3gre_A 54 LIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVY------------------------------S 103 (437)
T ss_dssp EEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCC------------------------------S
T ss_pred EEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCccc------------------------------c
Confidence 35567 89999999999999 9999999999999999998762211100 0
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECC---CCeEE------EeEEEe--C--CCCcEEEEE--EcCC
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR---SGQFE------CNATLE--G--HENEVKSVT--WSKN 145 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~---~~~~~------~~~~~~--~--~~~~v~~l~--~~~~ 145 (479)
. ....+|...|++++|+|++++|++|+.||.|++||+. +++.. .+..+. . +...+.++. ++++
T Consensus 104 ~--~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 181 (437)
T 3gre_A 104 S--SLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEE 181 (437)
T ss_dssp C--SEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSS
T ss_pred e--eeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCC
Confidence 0 0112589999999999999999999999999999994 44321 111121 2 456677777 5678
Q ss_pred CCEEEEEeCCCcEEEEEeCCCCceeeeeeeec--cccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeec-
Q psy14815 146 GQFLATCSRDKSVWVWEVGEEDEYECAAVINA--HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLK- 222 (479)
Q Consensus 146 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~- 222 (479)
+.+|++|+.||.|++||+++. +....+.. |...|++++|+|++++|++|+.||.|++||++++. .+..+.
T Consensus 182 ~~~l~~~~~d~~i~iwd~~~~---~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~ 254 (437)
T 3gre_A 182 KSLLVALTNLSRVIIFDIRTL---ERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNV----LIRSWSF 254 (437)
T ss_dssp CEEEEEEETTSEEEEEETTTC---CEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTE----EEEEEBC
T ss_pred CCEEEEEeCCCeEEEEeCCCC---eeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCcc----EEEEEec
Confidence 999999999999999999987 45556666 88999999999999999999999999999999754 355554
Q ss_pred CCCccEEEEEEc----cCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc-----------------
Q psy14815 223 SHTSTVWSLAFD----RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH----------------- 281 (479)
Q Consensus 223 ~~~~~v~~~~~~----~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 281 (479)
.|...|.+++|+ +++.+|++++.||.|++||++... ++..+.+|
T Consensus 255 ~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~l~ 319 (437)
T 3gre_A 255 GDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH---------------CQYAFINSDEQPSMEHFLPIEKGLE 319 (437)
T ss_dssp TTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTE---------------EEEEEESSSSCCCGGGGSCBCSSGG
T ss_pred CCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCc---------------EEEEEEcCCCCCccceecccccccc
Confidence 678899999665 467799999999999999986543 23333322
Q ss_pred --------ccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 282 --------HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 282 --------~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+...|++++|+ ++++|++|+.||.|++||+.+++
T Consensus 320 ~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~ 361 (437)
T 3gre_A 320 ELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELS 361 (437)
T ss_dssp GCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGG
T ss_pred cceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcc
Confidence 46779999999 77899999999999999998876
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=302.31 Aligned_cols=301 Identities=14% Similarity=0.226 Sum_probs=220.5
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
.|.+.|++++|+|+|++||+|+.||.|+|||+.+++...... ..... ......+
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~-------------------------~~~~~-~~~~~~~ 79 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHS-------------------------RGEYN-VYSTFQS 79 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCC-------------------------CCCEE-EEEEEEC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCccc-------------------------cccee-Eeccccc
Confidence 368999999999999999999999999999988765321110 00001 1112246
Q ss_pred cC------------CcEEEEEECCCC--CEEEEEECCCeEEEEECCCCeEE-----------------------------
Q psy14815 89 HQ------------RTIRETAWSPCG--NFIASASFDATTAVWDKRSGQFE----------------------------- 125 (479)
Q Consensus 89 ~~------------~~v~~v~~~~~~--~~l~t~~~dg~i~iwd~~~~~~~----------------------------- 125 (479)
|. ..|++++|+|++ .+|++++.|+.|++||+.+++..
T Consensus 80 h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 159 (447)
T 3dw8_B 80 HEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRP 159 (447)
T ss_dssp CCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEE
T ss_pred ccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccc
Confidence 66 889999999998 79999999999999998764321
Q ss_pred --------EeEE-EeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeee-------eeeccccceeEEEEec
Q psy14815 126 --------CNAT-LEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA-------VINAHIQDVKKVRFHP 189 (479)
Q Consensus 126 --------~~~~-~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-------~~~~~~~~v~~l~~~~ 189 (479)
.... ..+|...|.+++|+|++++|++| .||.|++||++... .... .+..|...|++++|+|
T Consensus 160 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~p 236 (447)
T 3dw8_B 160 MDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITD--RSFNIVDIKPANMEELTEVITAAEFHP 236 (447)
T ss_dssp EEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEE--EEEEEEECCCSSGGGCCCCEEEEEECS
T ss_pred hheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCC--ceeeeeecccccccccCcceEEEEECC
Confidence 0112 36799999999999999999999 79999999998432 2222 3568899999999999
Q ss_pred CC-CEEEEEEcCCcEEEEecCCcccceEeeeeecCCCc------------cEEEEEEccCCCEEEEeeCCCeEEEEeccC
Q psy14815 190 FD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTS------------TVWSLAFDRIGSRLATCSDDATVKIWKEYK 256 (479)
Q Consensus 190 ~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~------------~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 256 (479)
++ ++|++|+.||.|++||++++.........+..|.. .|.+++|+|++++|++++. +.|++||++.
T Consensus 237 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 237 NSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp SCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTC
T ss_pred CCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCC
Confidence 98 99999999999999999976632122456666765 8999999999999999998 9999999975
Q ss_pred CCCCCCCCCCCCCCceEEEEEEeccccc---------------cEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCC--
Q psy14815 257 PGNSAGIPTPDNDSVWKCVCTLSGHHGR---------------TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS-- 319 (479)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~-- 319 (479)
... ++..+.+| .. .+..++|+|++++|++|+.||.|++||+.+++...
T Consensus 316 ~~~--------------~~~~~~~~-~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~ 380 (447)
T 3dw8_B 316 ENR--------------PVETYQVH-EYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLE 380 (447)
T ss_dssp CSS--------------CSCCEESC-GGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEE
T ss_pred Ccc--------------ccceeecc-ccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeee
Confidence 222 12344444 21 13459999999999999999999999999876100
Q ss_pred ---C--------ceee---------EEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 320 ---D--------MVSF---------DLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 320 ---~--------~~~~---------~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+ .... .........+...|..++|+|++.+|+.+.
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~ 435 (447)
T 3dw8_B 381 ASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVAT 435 (447)
T ss_dssp CCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEEC
T ss_pred ecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEe
Confidence 0 0000 000000113456789999999999987654
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-36 Score=275.16 Aligned_cols=249 Identities=22% Similarity=0.350 Sum_probs=205.7
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC--CCCEEEEEeCCCcEEEEEe
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK--NGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~~~~~dg~i~vwd~ 163 (479)
..+|...|++++|+|++++|++|+.|++|++||+.++.......+.+|.+.|.+++|++ ++++|++|+.||+|++||+
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~ 84 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKE 84 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEB
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEc
Confidence 46899999999999999999999999999999997654346788999999999999986 4899999999999999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecC--CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC-----
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPF--DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI----- 236 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----- 236 (479)
+++. ......+..|...|++++|+|+ +++|++++.|+.|++||++.... .....+.+|...|.+++|+|+
T Consensus 85 ~~~~-~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~--~~~~~~~~h~~~v~~~~~~p~~~~~~ 161 (297)
T 2pm7_B 85 ENGR-WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT--TSPIIIDAHAIGVNSASWAPATIEED 161 (297)
T ss_dssp SSSC-BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC--BCCEEEECCSSCEEEEEECCCC----
T ss_pred CCCc-eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc--eeeeeeecccCccceEeecCCccccc
Confidence 8753 1344567789999999999997 88999999999999999986542 113456789999999999997
Q ss_pred --------CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCC---CeEEEEeCCC
Q psy14815 237 --------GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT---DLIATACGDD 305 (479)
Q Consensus 237 --------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~---~~l~~~~~dg 305 (479)
+++|++|+.|++|++||++... ..+.+...+.+| ...|.+++|+|++ .+|++++.|+
T Consensus 162 ~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~-----------~~~~~~~~l~~H-~~~V~~v~~sp~~~~~~~las~s~D~ 229 (297)
T 2pm7_B 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDA-----------QTYVLESTLEGH-SDWVRDVAWSPTVLLRSYMASVSQDR 229 (297)
T ss_dssp --------CCEEEEEETTSCEEEEEEETTT-----------TEEEEEEEECCC-SSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred ccCCCCCCcceEEEEcCCCcEEEEEEcCCC-----------ceEEEEEEecCC-CCceEEEEECCCCCCceEEEEEECCC
Confidence 5799999999999999986542 223456778887 8899999999984 8999999999
Q ss_pred eEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 306 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 306 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+|++||++...... .........|...|.+++|+|++++|+.+.
T Consensus 230 ~v~iWd~~~~~~~~-----~~~~~~~~~~~~~v~~~~~s~~g~~las~~ 273 (297)
T 2pm7_B 230 TCIIWTQDNEQGPW-----KKTLLKEEKFPDVLWRASWSLSGNVLALSG 273 (297)
T ss_dssp CEEEEEESSTTSCC-----EEEESSSSCCSSCEEEEEECSSSCCEEEEE
T ss_pred cEEEEEeCCCCCcc-----ceeeeecccCCCcEEEEEECCCCCEEEEEc
Confidence 99999998753110 011111246788999999999999997664
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=305.98 Aligned_cols=297 Identities=11% Similarity=0.078 Sum_probs=217.4
Q ss_pred cccceEEEEECCCC---------CeEEE-------------------eeCCCcEEEEeccccccc----ccc--------
Q psy14815 10 HQGRVWNVSWNPQG---------TMISS-------------------CGEDKNIRLWVMVIREPY----EKL-------- 49 (479)
Q Consensus 10 h~~~V~~l~~s~~~---------~~l~t-------------------~~~dg~v~iwd~~~~~~~----~~~-------- 49 (479)
+.+.|.+|+|+|++ ++||+ ++.|++|+|||+.+++.. ..+
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 56788889998876 56665 557899999999876532 111
Q ss_pred --cCCCc------cceEEEeecCCcEEEecCCCCCCc------eeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEE
Q psy14815 50 --HGLPV------ETSLRQLVEDKNIRLWGKESFGNK------FTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 115 (479)
Q Consensus 50 --~~~~~------~~~~~~~~~~~~i~~w~~~~~~~~------~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~ 115 (479)
...+. ...+++++.|++|++|++...... .........+|...|++++|++++ .|++|+.||+|+
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~ 290 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVA 290 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEE
Confidence 11232 357888999999999999753221 001112346789999999999864 899999999999
Q ss_pred EEECCCCeEEEeEEEeCCCCcEEEE--EEcCCC-CEEEEEeCCCcEEEEEeCCCCceeeeeeeecccc--ceeEEEEecC
Q psy14815 116 VWDKRSGQFECNATLEGHENEVKSV--TWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ--DVKKVRFHPF 190 (479)
Q Consensus 116 iwd~~~~~~~~~~~~~~~~~~v~~l--~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~--~v~~l~~~~~ 190 (479)
+||++++. .....+.+|...|.++ .|++++ .+|++|+.|++|++||+++. .+...+.+|.. .|.+++|+|+
T Consensus 291 lWD~~~~~-~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~---~~~~~~~~~~~~~~v~~v~fsp~ 366 (524)
T 2j04_B 291 EFDLTDPE-VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDI---ATTKTTVSRFRGSNLVPVVYCPQ 366 (524)
T ss_dssp EEETTBCS-SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGH---HHHCEEEEECSCCSCCCEEEETT
T ss_pred EEECCCCC-CceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCC---CcccccccccccCcccceEeCCC
Confidence 99998764 2445688999999999 578887 89999999999999999876 33444555543 4789999999
Q ss_pred CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCC---------
Q psy14815 191 DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA--------- 261 (479)
Q Consensus 191 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--------- 261 (479)
++.+++++.|++|++||++.+.. ...+.+|.+.|++++|+|++++|++|+.||+|++||+.......
T Consensus 367 ~~~l~s~~~d~tv~lwd~~~~~~----~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~ 442 (524)
T 2j04_B 367 IYSYIYSDGASSLRAVPSRAAFA----VHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQK 442 (524)
T ss_dssp TTEEEEECSSSEEEEEETTCTTC----CEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CC
T ss_pred cCeEEEeCCCCcEEEEECccccc----ceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCcccee
Confidence 99999999999999999997653 45677899999999999999999999999999999975431110
Q ss_pred -----CCC-CCCCC--------------CceEEEEEEeccccccEEEEEecCCCC---eEEEEeCCCeEEEcccCCCC
Q psy14815 262 -----GIP-TPDND--------------SVWKCVCTLSGHHGRTIYDISWCHLTD---LIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 262 -----~~~-~~~~~--------------~~~~~~~~~~~~~~~~i~~l~~~~~~~---~l~~~~~dg~i~vw~~~~~~ 316 (479)
.+. .+... ....++.++.+| ..+|.+++|+|++. ++++|+.||.|+||++....
T Consensus 443 ~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh-~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~~ 519 (524)
T 2j04_B 443 SLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAH-GINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLEH 519 (524)
T ss_dssp CCEEEECBCCSSSCEEEECCCCCCCC-------------C-CCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC-
T ss_pred eeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCC-CceEEEEECCCCCCccHHHHhhccCceEEEEEccccc
Confidence 000 00000 123456667776 78999999999964 99999999999999987653
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-36 Score=285.66 Aligned_cols=285 Identities=15% Similarity=0.215 Sum_probs=225.5
Q ss_pred cccccccccccceEEEEECCC---CCeEEEeeCCCcEEEEeccc-ccccccccCCCccceEEEeecCCcEEEecCCCCCC
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQ---GTMISSCGEDKNIRLWVMVI-REPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGN 77 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~---~~~l~t~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~ 77 (479)
..++.+++|.+.|++++|+|+ |++|++|+.||.|++||+.+ +..+
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~------------------------------- 78 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTI------------------------------- 78 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEE-------------------------------
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCcee-------------------------------
Confidence 456788999999999999999 69999999999999999875 2221
Q ss_pred ceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEE--cCCCCEEEEEeCC
Q psy14815 78 KFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTW--SKNGQFLATCSRD 155 (479)
Q Consensus 78 ~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~--~~~~~~l~~~~~d 155 (479)
.....+|...|++++|+|++++|++++.||.|++||+.+++.. .+..|...|.+++| ++++++|++++.|
T Consensus 79 -----~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 150 (368)
T 3mmy_A 79 -----PKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAI---QIAQHDAPVKTIHWIKAPNYSCVMTGSWD 150 (368)
T ss_dssp -----EEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE---EEEECSSCEEEEEEEECSSCEEEEEEETT
T ss_pred -----EEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCce---eeccccCceEEEEEEeCCCCCEEEEccCC
Confidence 1112578999999999999999999999999999999998632 35569999999999 8899999999999
Q ss_pred CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEcc
Q psy14815 156 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR 235 (479)
Q Consensus 156 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 235 (479)
|.|++||+++.+ ....+..+. .+.++.+. ...+++++.++.+++|+++.......... ..+...+.++.+.+
T Consensus 151 g~i~vwd~~~~~---~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 222 (368)
T 3mmy_A 151 KTLKFWDTRSSN---PMMVLQLPE-RCYCADVI--YPMAVVATAERGLIVYQLENQPSEFRRIE--SPLKHQHRCVAIFK 222 (368)
T ss_dssp SEEEEECSSCSS---CSEEEECSS-CEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEEECC--CSCSSCEEEEEEEE
T ss_pred CcEEEEECCCCc---EEEEEecCC-CceEEEec--CCeeEEEeCCCcEEEEEeccccchhhhcc--ccccCCCceEEEcc
Confidence 999999999874 444455443 55666665 45889999999999999987654322222 23444556666655
Q ss_pred CCCE----EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccc-----------cccEEEEEecCCCCeEEE
Q psy14815 236 IGSR----LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-----------GRTIYDISWCHLTDLIAT 300 (479)
Q Consensus 236 ~~~~----l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~i~~l~~~~~~~~l~~ 300 (479)
+... +++++.||.|++||++..... .....+.+|. ..+|++++|+|++++|++
T Consensus 223 ~~~~~~~~~~~~~~dg~i~i~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s 290 (368)
T 3mmy_A 223 DKQNKPTGFALGSIEGRVAIHYINPPNPA------------KDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLAT 290 (368)
T ss_dssp CTTSCEEEEEEEETTSEEEEEESSCSCHH------------HHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEE
T ss_pred cCCCCCCeEEEecCCCcEEEEecCCCCcc------------ccceeeeeeecccccccccccccceEEEEEecCCCEEEE
Confidence 5544 999999999999998654220 1234444442 227999999999999999
Q ss_pred EeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcccc
Q psy14815 301 ACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTNL 355 (479)
Q Consensus 301 ~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~ 355 (479)
++.||.|++||+.+++ ....+.+|..+|++++|+|++++|+.++.
T Consensus 291 ~~~dg~i~iwd~~~~~----------~~~~~~~~~~~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 291 VGSDGRFSFWDKDART----------KLKTSEQLDQPISACCFNHNGNIFAYASS 335 (368)
T ss_dssp EETTSCEEEEETTTTE----------EEEECCCCSSCEEEEEECTTSSCEEEEEC
T ss_pred EccCCeEEEEECCCCc----------EEEEecCCCCCceEEEECCCCCeEEEEec
Confidence 9999999999999886 33445689999999999999999988763
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=317.53 Aligned_cols=195 Identities=9% Similarity=0.063 Sum_probs=159.3
Q ss_pred ccccccceEEEEECCCCCeEEEeeCCCcEEEEeccccccccccc---------CCCccceEEEeecCCcEEEecCCCCCC
Q psy14815 7 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLH---------GLPVETSLRQLVEDKNIRLWGKESFGN 77 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~w~~~~~~~ 77 (479)
..||.+.|++++|+|++++||+|+.||+|+||+....+....+. ..+ +..+++++.|+++++||++....
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~ 91 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKV 91 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSE
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcE
Confidence 45899999999999999999999999999999987765443322 224 55789999999999999985321
Q ss_pred ceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEe---------EEEeCCCCcEEEEEEcCC-CC
Q psy14815 78 KFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECN---------ATLEGHENEVKSVTWSKN-GQ 147 (479)
Q Consensus 78 ~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~---------~~~~~~~~~v~~l~~~~~-~~ 147 (479)
. .. ..|...|++++|+|+++++++|+.||.|++||+++++.... ..+.+|.+.|.+++|+|+ +.
T Consensus 92 ~----~~--~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~ 165 (902)
T 2oaj_A 92 L----TT--VFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIG 165 (902)
T ss_dssp E----EE--EECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEE
T ss_pred E----EE--EcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCC
Confidence 1 11 13668999999999999999999999999999998864211 223678899999999995 57
Q ss_pred EEEEEeCCCcEEEEEeCCCCceeeeeeeecc------------------ccceeEEEEecCCCEEEEEEcCCcEEEEecC
Q psy14815 148 FLATCSRDKSVWVWEVGEEDEYECAAVINAH------------------IQDVKKVRFHPFDNILASASYDDTVKLFKED 209 (479)
Q Consensus 148 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~------------------~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~ 209 (479)
.+++|+.||.| +||+++. +....+..| ...|++++|+|++++|++|+.||.|++||++
T Consensus 166 ~l~~g~~dg~v-lWd~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~ 241 (902)
T 2oaj_A 166 TVLISYEYVTL-TYSLVEN---EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDAN 241 (902)
T ss_dssp EEEEECSSCEE-EEETTTT---EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETT
T ss_pred EEEEEeCCCcE-EEECCCC---ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 89999999999 9999987 334444433 5779999999999999999999999999998
Q ss_pred Ccc
Q psy14815 210 KAE 212 (479)
Q Consensus 210 ~~~ 212 (479)
+++
T Consensus 242 ~g~ 244 (902)
T 2oaj_A 242 SGH 244 (902)
T ss_dssp TCC
T ss_pred CCc
Confidence 754
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-35 Score=281.74 Aligned_cols=283 Identities=22% Similarity=0.262 Sum_probs=223.9
Q ss_pred ccccccccccceEEEEECC-CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 3 NSQTLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
..+.+++|.+.|++++|+| ++++|++|+.||.|++||+.+++....+.... ....
T Consensus 35 ~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~------------------------~~~~ 90 (408)
T 4a11_B 35 DRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKA------------------------VCSI 90 (408)
T ss_dssp TEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECE------------------------EEEE
T ss_pred ceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccc------------------------cccc
Confidence 3567889999999999999 99999999999999999998877654431100 0000
Q ss_pred eEEeccccCCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC---CCEEEEEeCCCc
Q psy14815 82 KAILSDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN---GQFLATCSRDKS 157 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~---~~~l~~~~~dg~ 157 (479)
......+|...|.+++|+| ++.+|++++.||.|++||+.+++ ....+. +...+.++.|++. +.++++++.||.
T Consensus 91 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (408)
T 4a11_B 91 GRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQ--TADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPK 167 (408)
T ss_dssp CTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTE--EEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSS
T ss_pred cccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCc--cceecc-CCCceeeeEeecCCCCCcEEEEEcCCCe
Confidence 0001246899999999999 77899999999999999999986 344444 6778999999984 459999999999
Q ss_pred EEEEEeCCCCceeeeeeeeccccceeEEEEecCCC-EEEEEEcCCcEEEEecCCcccceEe------------eeeecCC
Q psy14815 158 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASASYDDTVKLFKEDKAEADWIN------------FATLKSH 224 (479)
Q Consensus 158 i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~------------~~~~~~~ 224 (479)
|++||+++. .....+..|...|++++|+|+++ ++++++.||.|++||++........ ......|
T Consensus 168 v~~~d~~~~---~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (408)
T 4a11_B 168 VQLCDLKSG---SCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAH 244 (408)
T ss_dssp EEEEESSSS---CCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSC
T ss_pred EEEEeCCCc---ceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccc
Confidence 999999987 45567788999999999999988 5899999999999999876521111 1122578
Q ss_pred CccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCC--------------------------------CCCce
Q psy14815 225 TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD--------------------------------NDSVW 272 (479)
Q Consensus 225 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--------------------------------~~~~~ 272 (479)
...|.+++|+|++++|++++.||.|++||+............. .....
T Consensus 245 ~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~ 324 (408)
T 4a11_B 245 NGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSG 324 (408)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTC
T ss_pred cCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCC
Confidence 8999999999999999999999999999998765432211100 00234
Q ss_pred EEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 273 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 273 ~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+++..+.+| ...|++++|+|++++|++++.||.|++|++.+.+
T Consensus 325 ~~~~~~~~~-~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 325 EQITMLKGH-YKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp CEEEEECCC-SSCEEEEEEETTTTEEEEEETTSCEEEEEECC--
T ss_pred cceeeeccC-CCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCC
Confidence 567777776 7899999999999999999999999999999886
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-37 Score=294.71 Aligned_cols=277 Identities=17% Similarity=0.237 Sum_probs=223.0
Q ss_pred ccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCe-----
Q psy14815 49 LHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ----- 123 (479)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~----- 123 (479)
+...+++..+++++.|+++++||..... .......|...|.+++|+|++++|++|+.|+.+++||+.+..
T Consensus 72 ~~~sp~~~~l~s~s~D~~v~iWd~~~~~-----~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~ 146 (380)
T 3iz6_a 72 LDWTPEKNWIVSASQDGRLIVWNALTSQ-----KTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGN 146 (380)
T ss_dssp EEECTTSSCEEEEETTSEEEEEETTTTE-----EEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCS
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCc-----cceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCC
Confidence 3345677889999999999999987422 122335789999999999999999999999999999987532
Q ss_pred EEEeEEEeCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEEeCCCCceeeee--eeeccccceeEEEEec-CCCEEEEEEc
Q psy14815 124 FECNATLEGHENEVKSVTWSKN-GQFLATCSRDKSVWVWEVGEEDEYECAA--VINAHIQDVKKVRFHP-FDNILASASY 199 (479)
Q Consensus 124 ~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~--~~~~~~~~v~~l~~~~-~~~~l~~~~~ 199 (479)
......+.+|.+.|.++.|+|+ +..|++|+.|++|++||+++++...... ...+|...|.+++|++ ++++|++|+.
T Consensus 147 ~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~ 226 (380)
T 3iz6_a 147 MPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSC 226 (380)
T ss_dssp STTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEET
T ss_pred ccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEEC
Confidence 1233467889999999999996 4579999999999999999874332221 1157889999999987 7899999999
Q ss_pred CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEe
Q psy14815 200 DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS 279 (479)
Q Consensus 200 dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (479)
|+.|++||++... ..+..+.+|...|.+++|+|++++|++|+.||+|++||++.+ .++..+.
T Consensus 227 D~~v~~wd~~~~~---~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~---------------~~~~~~~ 288 (380)
T 3iz6_a 227 DTTVRLWDLRITS---RAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTG---------------HQLQVYN 288 (380)
T ss_dssp TSCEEEEETTTTC---CCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTT---------------EEEEEEC
T ss_pred CCeEEEEECCCCC---cceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCC---------------cEEEEec
Confidence 9999999998543 246778899999999999999999999999999999998554 3444444
Q ss_pred ccc------cccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 280 GHH------GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 280 ~~~------~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
.+. ...|++++|+|++++|++|+.||.|++||...++ ....+.....+|.+.|++++|+|++++|+++
T Consensus 289 ~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~------~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg 362 (380)
T 3iz6_a 289 REPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAE------MVLNLGTLQNSHEGRISCLGLSSDGSALCTG 362 (380)
T ss_dssp CCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCC------EEEEECCSCSSCCCCCCEEEECSSSSEEEEE
T ss_pred ccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCc------eEEEEecccCCCCCceEEEEECCCCCEEEEe
Confidence 321 2358999999999999999999999999998876 0111223336899999999999999999776
Q ss_pred c
Q psy14815 354 N 354 (479)
Q Consensus 354 ~ 354 (479)
+
T Consensus 363 s 363 (380)
T 3iz6_a 363 S 363 (380)
T ss_dssp C
T ss_pred e
Confidence 5
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=287.74 Aligned_cols=288 Identities=15% Similarity=0.186 Sum_probs=231.9
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC----------CCccceEEEeecCCcEEEecCCCCCCc
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG----------LPVETSLRQLVEDKNIRLWGKESFGNK 78 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~w~~~~~~~~ 78 (479)
+|.+.|++++|+|++++|++++.||.|++|| .+++.+..+.. .+.+..+++++.++.+++|++......
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 184 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVM 184 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEE
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEE
Confidence 3788999999999999999999999999999 55555554443 356778889999999999999742211
Q ss_pred eeeeEEeccccCCc---------------EEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEc
Q psy14815 79 FTAKAILSDGHQRT---------------IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWS 143 (479)
Q Consensus 79 ~~~~~~~~~~~~~~---------------v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~ 143 (479)
.....+... +.+++|+|++ .+++++.+|.|++||+.+++ ....+..|...|.+++|+
T Consensus 185 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~--~~~~~~~~~~~i~~~~~~ 256 (425)
T 1r5m_A 185 -----QHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKT--PTGKLIGHHGPISVLEFN 256 (425)
T ss_dssp -----EEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSS--CSEEECCCSSCEEEEEEE
T ss_pred -----EEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCc--eeeeeccCCCceEEEEEC
Confidence 112233333 8999999875 68899999999999999886 567788899999999999
Q ss_pred CCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC
Q psy14815 144 KNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS 223 (479)
Q Consensus 144 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 223 (479)
|++++|++++.||.|++||++.. .....+..|...+.+++|+|++ ++++++.|+.|++||++++. .+..+..
T Consensus 257 ~~~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~----~~~~~~~ 328 (425)
T 1r5m_A 257 DTNKLLLSASDDGTLRIWHGGNG---NSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNT----LLALSIV 328 (425)
T ss_dssp TTTTEEEEEETTSCEEEECSSSB---SCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTE----EEEEEEC
T ss_pred CCCCEEEEEcCCCEEEEEECCCC---ccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCc----EeEeccc
Confidence 99999999999999999999887 4556677899999999999999 99999999999999998655 3667778
Q ss_pred CCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCC-----CCceEEEEEEeccccc-cEEEEEecCCCCe
Q psy14815 224 HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDN-----DSVWKCVCTLSGHHGR-TIYDISWCHLTDL 297 (479)
Q Consensus 224 ~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~i~~l~~~~~~~~ 297 (479)
|...|.+++|+|++++|++++.||.|++||+.............. .....++..+.+|... .|++++|+|++++
T Consensus 329 ~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 408 (425)
T 1r5m_A 329 DGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNK 408 (425)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSE
T ss_pred CCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCce
Confidence 999999999999999999999999999999865432111000000 0112367788887444 9999999999999
Q ss_pred EEEEeCCCeEEEcccC
Q psy14815 298 IATACGDDAIRIFKEN 313 (479)
Q Consensus 298 l~~~~~dg~i~vw~~~ 313 (479)
|++++.||.|++|+++
T Consensus 409 l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 409 ISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEEEESSSCCEEEECC
T ss_pred EEEEecCceEEEEeec
Confidence 9999999999999985
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-36 Score=313.27 Aligned_cols=338 Identities=10% Similarity=0.069 Sum_probs=231.9
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEeccccccc-----------ccccC----------CCc-cceEEEe
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPY-----------EKLHG----------LPV-ETSLRQL 61 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~-----------~~~~~----------~~~-~~~~~~~ 61 (479)
+.++. |.+.|++++|+|++++|++|+.||+|++||+.+++.. ..+.. ++. ...++++
T Consensus 92 ~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g 170 (902)
T 2oaj_A 92 LTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLIS 170 (902)
T ss_dssp EEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEE
T ss_pred EEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEE
Confidence 34554 6789999999999999999999999999999877642 11111 232 3567888
Q ss_pred ecCCcEEEecCCCCCCceeeeEE-------------eccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeE
Q psy14815 62 VEDKNIRLWGKESFGNKFTAKAI-------------LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNA 128 (479)
Q Consensus 62 ~~~~~i~~w~~~~~~~~~~~~~~-------------~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~ 128 (479)
+.++.+ +||++........... ....|...|++++|+|++.+|++|+.||+|++||+++++.....
T Consensus 171 ~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r 249 (902)
T 2oaj_A 171 YEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMAR 249 (902)
T ss_dssp CSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEE
T ss_pred eCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEE
Confidence 899999 9999852211111000 01234678999999999999999999999999999988643322
Q ss_pred EE---eC-------------CCCcEEEEEEcC----CC-CEEEEEeCC-----CcEEEEE--------------------
Q psy14815 129 TL---EG-------------HENEVKSVTWSK----NG-QFLATCSRD-----KSVWVWE-------------------- 162 (479)
Q Consensus 129 ~~---~~-------------~~~~v~~l~~~~----~~-~~l~~~~~d-----g~i~vwd-------------------- 162 (479)
.+ .. |...|.+++|++ ++ ..+++|+.+ ..+++|+
T Consensus 250 ~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~ 329 (902)
T 2oaj_A 250 TVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYA 329 (902)
T ss_dssp CSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHH
T ss_pred eecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhc
Confidence 22 11 345789999953 32 455666444 2455555
Q ss_pred ---------------------------------------------------eCCCCceee----eee-------------
Q psy14815 163 ---------------------------------------------------VGEEDEYEC----AAV------------- 174 (479)
Q Consensus 163 ---------------------------------------------------~~~~~~~~~----~~~------------- 174 (479)
+.++..... ...
T Consensus 330 ~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~ 409 (902)
T 2oaj_A 330 NPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMA 409 (902)
T ss_dssp SCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEE
T ss_pred CccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEE
Confidence 322110000 000
Q ss_pred ---------------------eeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeee--e-----cCCCc
Q psy14815 175 ---------------------INAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT--L-----KSHTS 226 (479)
Q Consensus 175 ---------------------~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~-----~~~~~ 226 (479)
+.+|...+.+++|+|++++|++|+.|++|++||+..+......... + .+|..
T Consensus 410 s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~ 489 (902)
T 2oaj_A 410 ASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKEL 489 (902)
T ss_dssp EEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSC
T ss_pred EEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCC
Confidence 1122223334556788999999999999999999876421100111 1 27899
Q ss_pred cEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCC-----------------CC-------------CCCCCCceEEEE
Q psy14815 227 TVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAG-----------------IP-------------TPDNDSVWKCVC 276 (479)
Q Consensus 227 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-----------------~~-------------~~~~~~~~~~~~ 276 (479)
.|++++|+|++++|++|+.||+|++||+........ +. .+.-...+.++.
T Consensus 490 ~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 569 (902)
T 2oaj_A 490 AVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPST 569 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEE
T ss_pred ceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeE
Confidence 999999999999999999999999999976532100 00 000011246678
Q ss_pred EEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEe----cccc-ccccceeEEEec-----CC
Q psy14815 277 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVH----TEHR-AHNQDVNCVAWN-----PV 346 (479)
Q Consensus 277 ~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~----~~~~-~h~~~v~~~~~s-----p~ 346 (479)
.+.+| ..+|++++|+|+| +||+|+.|++|++||++... ++. ..+. +|...|++++|| ||
T Consensus 570 ~l~~h-~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~---------~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~D 638 (902)
T 2oaj_A 570 AVHAN-KGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPA---------IIYMENIREISGAQSACVTCIEFVIMEYGDD 638 (902)
T ss_dssp EECCC-SCSEEEEEECBTS-EEEEEETTSEEEEEETTTTE---------EEEEEEGGGTCSSCCCCEEEEEEEEEECTTS
T ss_pred EEEcC-CCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCe---------EEEEeehhHhccccccceEEEEEEEEecCCC
Confidence 88886 8899999999999 99999999999999987765 221 2343 899999999999 88
Q ss_pred C---CCCCccc
Q psy14815 347 V---PEPQKTN 354 (479)
Q Consensus 347 ~---~~l~~~~ 354 (479)
| ++|+.++
T Consensus 639 g~~~~~l~sgs 649 (902)
T 2oaj_A 639 GYSSILMVCGT 649 (902)
T ss_dssp SSEEEEEEEEE
T ss_pred CCcceEEEEEe
Confidence 6 6776553
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-36 Score=312.20 Aligned_cols=266 Identities=23% Similarity=0.397 Sum_probs=221.6
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+.++.+|.+.|++++|+|++++|++|+.||+|++||+..+.. ...
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~-----------------------------------~~~ 46 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH-----------------------------------KLI 46 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEE-----------------------------------EEE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCC-----------------------------------ccc
Confidence 567899999999999999999999999999999999863211 111
Q ss_pred EeccccCCcEEEEEECCC--CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCcEE
Q psy14815 84 ILSDGHQRTIRETAWSPC--GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVW 159 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~ 159 (479)
....+|..+|++++|+|+ +++|++|+.||.|++||+.+++......+..|...|.+++|+|+ ++.+++|+.||.|+
T Consensus 47 ~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~ 126 (753)
T 3jro_A 47 DTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVS 126 (753)
T ss_dssp EEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred eeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEE
Confidence 123679999999999987 99999999999999999999976677888999999999999999 99999999999999
Q ss_pred EEEeCCCCceeeeeeeeccccceeEEEEec-------------CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCc
Q psy14815 160 VWEVGEEDEYECAAVINAHIQDVKKVRFHP-------------FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTS 226 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~-------------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 226 (479)
+||++.... .....+..|...|++++|+| +++++++|+.||.|++||++++.........+.+|..
T Consensus 127 vwdl~~~~~-~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~ 205 (753)
T 3jro_A 127 VVEFKENGT-TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD 205 (753)
T ss_dssp EEECCSSSC-CCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS
T ss_pred EEEeecCCC-cceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCC
Confidence 999988643 23345678999999999999 5899999999999999999987765567788899999
Q ss_pred cEEEEEEccC---CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeC
Q psy14815 227 TVWSLAFDRI---GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 303 (479)
Q Consensus 227 ~v~~~~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~ 303 (479)
.|++++|+|+ +++|++++.||.|++||++....... ........ +...|++++|+|+++++++++.
T Consensus 206 ~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~----------~~~~~~~~-~~~~v~~l~~spdg~~l~s~s~ 274 (753)
T 3jro_A 206 WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWK----------KTLLKEEK-FPDVLWRASWSLSGNVLALSGG 274 (753)
T ss_dssp CEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCB----------CCBSSSSC-CSSCCCCEEECTTTCCEEEECS
T ss_pred cEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcce----------eEEeccCC-CCCceEEEEEcCCCCEEEEEcC
Confidence 9999999999 89999999999999999976532211 00111222 3778999999999999999999
Q ss_pred CCeEEEcccCCCC
Q psy14815 304 DDAIRIFKENPEA 316 (479)
Q Consensus 304 dg~i~vw~~~~~~ 316 (479)
||.|++|++....
T Consensus 275 Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 275 DNKVTLWKENLEG 287 (753)
T ss_dssp SSCEECCBCCSSS
T ss_pred CCEEEEEecCCCC
Confidence 9999999998643
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-35 Score=282.43 Aligned_cols=271 Identities=21% Similarity=0.386 Sum_probs=228.5
Q ss_pred eEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcE
Q psy14815 14 VWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 93 (479)
Q Consensus 14 V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v 93 (479)
.+.|+||++ ++|++|. |++|+|||..+++....+. ..+|...|
T Consensus 108 ~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~-----------------------------------~~~~~~~V 150 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQ-----------------------------------MEQPGEYI 150 (420)
T ss_dssp CBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEE-----------------------------------CCSTTCCE
T ss_pred ceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEE-----------------------------------ecCCCCcE
Confidence 567999975 5777775 8999999998877654331 24688899
Q ss_pred EEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeee
Q psy14815 94 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA 173 (479)
Q Consensus 94 ~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 173 (479)
++++|+|+|++|++|+.||+|++||+++++ .+..+.+|...+.+++++ +..+++|+.|+.+++||.+... ....
T Consensus 151 ~sv~fspdg~~lasgs~Dg~v~iWd~~~~~--~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~--~~~~ 224 (420)
T 4gga_A 151 SSVAWIKEGNYLAVGTSSAEVQLWDVQQQK--RLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAE--HHVA 224 (420)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSS--CEEE
T ss_pred EEEEECCCCCEEEEEECCCeEEEEEcCCCc--EEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccc--eeeE
Confidence 999999999999999999999999999996 678889999999998885 6799999999999999998764 4566
Q ss_pred eeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCC-EEEE--eeCCCeEE
Q psy14815 174 VINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLAT--CSDDATVK 250 (479)
Q Consensus 174 ~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s--~~~dg~i~ 250 (479)
.+.+|...+..+.++|+++++++++.|+.+++|+...+......+.....|...|.+++|+|.+. .+++ |+.|++|+
T Consensus 225 ~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~ 304 (420)
T 4gga_A 225 TLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIR 304 (420)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEE
T ss_pred EecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEE
Confidence 78899999999999999999999999999999999887655555677788999999999999765 4444 45799999
Q ss_pred EEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe--CCCeEEEcccCCCCCCCCceeeEEEe
Q psy14815 251 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC--GDDAIRIFKENPEAGDSDMVSFDLVH 328 (479)
Q Consensus 251 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~--~dg~i~vw~~~~~~~~~~~~~~~~~~ 328 (479)
+||+..+ .+...+.. ...+.++.|+|+++.+++++ .|+.|+|||+.+++ ++
T Consensus 305 iwd~~t~---------------~~~~~~~~--~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~---------~v- 357 (420)
T 4gga_A 305 IWNVCSG---------------ACLSAVDA--HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA---------KV- 357 (420)
T ss_dssp EEETTTT---------------EEEEEEEC--SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC---------EE-
T ss_pred EEeCCcc---------------ccceeecc--ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc---------EE-
Confidence 9998433 55666665 45789999999999888765 68999999999987 34
Q ss_pred ccccccccceeEEEecCCCCCCCccc
Q psy14815 329 TEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 329 ~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
..+.+|.+.|++++|+|||++|++++
T Consensus 358 ~~l~gH~~~V~~l~~spdg~~l~S~s 383 (420)
T 4gga_A 358 AELKGHTSRVLSLTMSPDGATVASAA 383 (420)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEE
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 44579999999999999999997765
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-36 Score=280.01 Aligned_cols=248 Identities=24% Similarity=0.369 Sum_probs=202.2
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC--CCCEEEEEeCCCcEEEEEe
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK--NGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~~~~~dg~i~vwd~ 163 (479)
..+|...|++++|+|++++|++|+.|++|++||+.+++......+.+|...|.+++|++ ++++|++|+.|++|++||+
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~ 88 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWRE 88 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECC
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEEC
Confidence 46899999999999999999999999999999999886556778999999999999986 4899999999999999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecC--CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC-----
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPF--DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI----- 236 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----- 236 (479)
+++. ......+.+|...|++++|+|+ +.+|++|+.|+.|++||++.... +.....+.+|...|.+++|+|+
T Consensus 89 ~~~~-~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~ 166 (316)
T 3bg1_A 89 ENGT-WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQ-WEVKKINNAHTIGCNAVSWAPAVVPGS 166 (316)
T ss_dssp SSSC-CCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSC-EEECCBTTSSSSCBCCCEECCCCCC--
T ss_pred CCCc-ceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCC-cceeeeeccccCCcceEEEccccCCcc
Confidence 8753 2344567789999999999997 78999999999999999986532 2334566789999999999997
Q ss_pred ------------CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCC----CeEEE
Q psy14815 237 ------------GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT----DLIAT 300 (479)
Q Consensus 237 ------------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~----~~l~~ 300 (479)
+++|++|+.|+.|++||++.. ..+.++..+.+| ...|.+++|+|++ ++|++
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~------------~~~~~~~~l~~h-~~~V~~v~~sp~~~~~~~~las 233 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGGCDNLIKLWKEEED------------GQWKEEQKLEAH-SDWVRDVAWAPSIGLPTSTIAS 233 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCEEEECTT------------SCEEEEECCBCC-SSCEEEEECCCCSSCSCCEEEE
T ss_pred ccccccccCccccceEEEecCCCeEEEEEeCCC------------CccceeeecccC-CCceEEEEecCCCCCCCceEEE
Confidence 478999999999999998432 223556778887 7899999999986 78999
Q ss_pred EeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 301 ACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 301 ~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
++.|++|++|++........ .......|...|.+++|+|++++|+.+.
T Consensus 234 ~s~D~~v~iw~~~~~~~~~~------~~~~~~~~~~~v~~v~~sp~g~~las~~ 281 (316)
T 3bg1_A 234 CSQDGRVFIWTCDDASSNTW------SPKLLHKFNDVVWHVSWSITANILAVSG 281 (316)
T ss_dssp EETTCEEEEEECSSTTCCCC------BCCEEEECSSCEEEEEECTTTCCEEEEE
T ss_pred EcCCCeEEEEEccCccccch------hhhhhhcCCCcEEEEEEcCCCCEEEEEc
Confidence 99999999999876321100 1112246788999999999999997664
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-36 Score=287.03 Aligned_cols=307 Identities=10% Similarity=0.037 Sum_probs=231.8
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
.-...|.+++|+|||+++||++.|++|+ |...+ ..+.+|+..-..+..+.++....|++....... .....
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~---~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~----~~~~~ 83 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYA---KDINCNSKNLFHVKEFPLEFENKLDFELAQQNG----LLNSQ 83 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCC---SCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSC----SSTTS
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--ccccc---ceecCCCccEEEEEECCCCCcceEEEEeCCCce----EeecC
Confidence 4568999999999999999999999999 64444 444678888888888888888888887532211 11225
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCC-----cEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHEN-----EVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~-----~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
|...|.+++|+|+|++||+++.||.|++||.++ ....+. |.. .|.+++|||||++|++|+.||+|++||+
T Consensus 84 ~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~----~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~ 158 (588)
T 2j04_A 84 PVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK----MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSI 158 (588)
T ss_dssp CSCCEEEEEECSSSSCEEEEETTSCEEEEETTE----EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEEC
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc----eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEEC
Confidence 688999999999999999999999999999543 445556 655 5999999999999999999999999999
Q ss_pred CCCCce----eeeeee----eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeee-cCCCccEEEEEEc
Q psy14815 164 GEEDEY----ECAAVI----NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL-KSHTSTVWSLAFD 234 (479)
Q Consensus 164 ~~~~~~----~~~~~~----~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~~v~~~~~~ 234 (479)
.++... -.+..+ .+|...|.+++|+|+| +++++.|+.|++||+...... ....++ .+|...|.+++|+
T Consensus 159 ~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~-~~~~tL~~~h~~~V~svaFs 235 (588)
T 2j04_A 159 RKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQ-PVSRMIQNASRRKITDLKIV 235 (588)
T ss_dssp CCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSC-CCEEEEECCCSSCCCCEEEE
T ss_pred CCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccc-cceeeecccccCcEEEEEEE
Confidence 986420 123444 5677899999999999 889999999999999876531 112345 4788999999999
Q ss_pred cCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEe--cCCCCeEEEEeCCCeEEEccc
Q psy14815 235 RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW--CHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 235 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~--~~~~~~l~~~~~dg~i~vw~~ 312 (479)
++.|++++ +++|++||+... .......+| ...|.+++| +|+++.|+++++||+ ++|..
T Consensus 236 --g~~LASa~-~~tIkLWd~~~~---------------~~~~~~~gh-~~~V~~va~~~s~d~~~La~a~edG~-klw~~ 295 (588)
T 2j04_A 236 --DYKVVLTC-PGYVHKIDLKNY---------------SISSLKTGS-LENFHIIPLNHEKESTILLMSNKTSY-KVLLE 295 (588)
T ss_dssp --TTEEEEEC-SSEEEEEETTTT---------------EEEEEECSC-CSCCCEEEETTCSSCEEEEECSSCEE-EEEES
T ss_pred --CCEEEEEe-CCeEEEEECCCC---------------eEEEEEcCC-CceEEEEEeeeCCCCCEEEEEcCCCC-EEEee
Confidence 68899887 699999997433 222222264 889999999 999999999999999 88886
Q ss_pred CCCCCCCCc----------eee----EEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 313 NPEAGDSDM----------VSF----DLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 313 ~~~~~~~~~----------~~~----~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+.-.-.++. ..+ +... .. .+...|++++|||||+.+|.+.
T Consensus 296 d~~~~spd~~l~a~~d~~v~lW~~~g~~l~-~~-~~~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 296 DELHVTADNIIAPYLEKKFKKWSTIWNEFN-NY-ETTLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp SSEEEECCCSSHHHHHHHHHHTTTTTTSSS-SS-CCEEEEEEEEECTTSSEEEEEE
T ss_pred ccEEECCCceEEEEcCCEEEEEECCCCcee-ee-ccceEEEEEEECCCCCEEEEEE
Confidence 421100000 000 0011 11 2355699999999999886553
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-35 Score=280.85 Aligned_cols=276 Identities=18% Similarity=0.285 Sum_probs=223.4
Q ss_pred ccccce--EEEEECCCCCeEEEeeCCCcEEEEecccccccccccC-----------CCccceEEEeecCCcEEEecCCCC
Q psy14815 9 GHQGRV--WNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG-----------LPVETSLRQLVEDKNIRLWGKESF 75 (479)
Q Consensus 9 ~h~~~V--~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~i~~w~~~~~ 75 (479)
+|...+ .+++|+ +..+++++.||.|++||+.+++....+.. .+++..+++++.++.+++|++...
T Consensus 89 ~~~~~~~~~~~~~s--~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~ 166 (401)
T 4aez_A 89 GIIDDYYLNLLDWS--NLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ 166 (401)
T ss_dssp TCCCCTTCBCEEEC--TTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CCcCCceEEEEeec--CCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC
Confidence 666554 446666 45688888999999999988776554432 356778889999999999998753
Q ss_pred CCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy14815 76 GNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 155 (479)
Q Consensus 76 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d 155 (479)
. ......+|...|.+++| +++++++++.||.|++||++... .....+.+|...|.+++|+|++++|++|+.|
T Consensus 167 ~-----~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 238 (401)
T 4aez_A 167 T-----KLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIAN-HQIGTLQGHSSEVCGLAWRSDGLQLASGGND 238 (401)
T ss_dssp C-----EEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS-CEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred e-----EEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCc-ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCC
Confidence 2 12223589999999999 46799999999999999998543 2567788999999999999999999999999
Q ss_pred CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCC-CEEEEEE--cCCcEEEEecCCcccceEeeeeecCCCccEEEEE
Q psy14815 156 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASAS--YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLA 232 (479)
Q Consensus 156 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 232 (479)
|.|++||+++. .....+..|...|.+++|+|++ .++++++ .|+.|++||++++.. +..+. +...|.+++
T Consensus 239 ~~v~iwd~~~~---~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~----~~~~~-~~~~v~~~~ 310 (401)
T 4aez_A 239 NVVQIWDARSS---IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR----VNTVD-AGSQVTSLI 310 (401)
T ss_dssp SCEEEEETTCS---SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE----EEEEE-CSSCEEEEE
T ss_pred CeEEEccCCCC---CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE----EEEEe-CCCcEEEEE
Confidence 99999999986 5556677899999999999976 5566654 799999999997663 44443 667899999
Q ss_pred EccCCCEEEE--eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEc
Q psy14815 233 FDRIGSRLAT--CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 310 (479)
Q Consensus 233 ~~~~~~~l~s--~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw 310 (479)
|+|+++++++ |+.||.|++||+.... ......+.+| ...|.+++|+|++++|++++.||.|++|
T Consensus 311 ~s~~~~~l~~~~g~~dg~i~v~~~~~~~-------------~~~~~~~~~h-~~~v~~~~~s~dg~~l~s~~~dg~i~iw 376 (401)
T 4aez_A 311 WSPHSKEIMSTHGFPDNNLSIWSYSSSG-------------LTKQVDIPAH-DTRVLYSALSPDGRILSTAASDENLKFW 376 (401)
T ss_dssp ECSSSSEEEEEECTTTCEEEEEEEETTE-------------EEEEEEEECC-SSCCCEEEECTTSSEEEEECTTSEEEEE
T ss_pred ECCCCCeEEEEeecCCCcEEEEecCCcc-------------ceeEEEecCC-CCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 9999999998 4489999999985431 2334456676 7899999999999999999999999999
Q ss_pred ccCCCC
Q psy14815 311 KENPEA 316 (479)
Q Consensus 311 ~~~~~~ 316 (479)
++.+++
T Consensus 377 ~~~~~~ 382 (401)
T 4aez_A 377 RVYDGD 382 (401)
T ss_dssp ECCC--
T ss_pred ECCCCc
Confidence 999886
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-35 Score=300.58 Aligned_cols=263 Identities=22% Similarity=0.286 Sum_probs=205.3
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
.+++.+|...|++++|+|++++|+||+.||+|+|||+.++.....+
T Consensus 423 ~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~---------------------------------- 468 (694)
T 3dm0_A 423 QRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRF---------------------------------- 468 (694)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE----------------------------------
T ss_pred cceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEE----------------------------------
Confidence 4578899999999999999999999999999999999876654332
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEe-EEEeCCCCcEEEEEEcCCC--CEEEEEeCCCcEEE
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECN-ATLEGHENEVKSVTWSKNG--QFLATCSRDKSVWV 160 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~v~~l~~~~~~--~~l~~~~~dg~i~v 160 (479)
.+|...|.+++|+|++++|++|+.|++|++||......... ....+|...|.+++|+|++ ..+++|+.|+.|++
T Consensus 469 ---~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~v 545 (694)
T 3dm0_A 469 ---VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKV 545 (694)
T ss_dssp ---ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEE
T ss_pred ---eCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEE
Confidence 57999999999999999999999999999999876531111 1124688899999999986 58999999999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEE
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 240 (479)
||+++. .....+.+|...|++++|+|++++|++|+.||.|++||++++.. +..+. +...|.+++|+|++.++
T Consensus 546 wd~~~~---~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~----~~~~~-~~~~v~~~~~sp~~~~l 617 (694)
T 3dm0_A 546 WNLSNC---KLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKK----LYSLE-ANSVIHALCFSPNRYWL 617 (694)
T ss_dssp EETTTC---CEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEE----EECCB-CSSCEEEEEECSSSSEE
T ss_pred EECCCC---cEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCce----EEEec-CCCcEEEEEEcCCCcEE
Confidence 999987 55677889999999999999999999999999999999997653 44444 45679999999999888
Q ss_pred EEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEE----EEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccC
Q psy14815 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC----VCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 313 (479)
Q Consensus 241 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~ 313 (479)
++++ ++.|++||++.......+........... ...... +...+++++|+|++++|++|+.||.|++|++.
T Consensus 618 ~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 618 CAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKR-KVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEE-TTEEEEEETTTTEEEEEECCCCC-----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCc-eeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 7765 56699999865432111110000000000 000000 12247899999999999999999999999985
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=281.07 Aligned_cols=253 Identities=19% Similarity=0.344 Sum_probs=210.8
Q ss_pred cccceEEEEECCC----CCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 10 HQGRVWNVSWNPQ----GTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 10 h~~~V~~l~~s~~----~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
|...|++++|+|+ +++|++|+.||.|++||+.+++.+..+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~------------------------------------ 111 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHY------------------------------------ 111 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEE------------------------------------
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeee------------------------------------
Confidence 6688999999998 679999999999999998876654433
Q ss_pred ccccCCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEE---eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14815 86 SDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATL---EGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vw 161 (479)
.+|...|.+++|+| ++.+|++++.||.|++||+++++ ....+ ..|...|.+++|+|++++|++++.||.|++|
T Consensus 112 -~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~ 188 (366)
T 3k26_A 112 -VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDT--LVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 188 (366)
T ss_dssp -ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTE--EEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred -cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCe--EEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEE
Confidence 46899999999999 89999999999999999999986 55566 6799999999999999999999999999999
Q ss_pred EeCCCCceee-------------------------eeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCccc---
Q psy14815 162 EVGEEDEYEC-------------------------AAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA--- 213 (479)
Q Consensus 162 d~~~~~~~~~-------------------------~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~--- 213 (479)
|+++.+.... ......|...|.+++|+ ++++++++.||.|++||+++...
T Consensus 189 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~ 266 (366)
T 3k26_A 189 RINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDID 266 (366)
T ss_dssp ESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGG
T ss_pred ECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCcccccc
Confidence 9987532110 11223388999999999 77999999999999999987542
Q ss_pred -------ceEeeeeecCCCccEEEEEEccC--CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc-cc
Q psy14815 214 -------DWINFATLKSHTSTVWSLAFDRI--GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HG 283 (479)
Q Consensus 214 -------~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 283 (479)
....+..+..|...|++++|+|+ +++|++++.||.|++||+...... ......+.+| +.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~-----------~~~~~~~~~~~~~ 335 (366)
T 3k26_A 267 KIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPH-----------KAKCTTLTHHKCG 335 (366)
T ss_dssp GCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGG-----------GCEEEEECCTTCC
T ss_pred ccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCc-----------cccceEEcccccC
Confidence 12346677889999999999999 999999999999999998665322 1234566665 26
Q ss_pred ccEEEEEecCCCCeEEEEeCCCeEEEcccCC
Q psy14815 284 RTIYDISWCHLTDLIATACGDDAIRIFKENP 314 (479)
Q Consensus 284 ~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~ 314 (479)
..|++++|+|++++|++++.||.|++||+.+
T Consensus 336 ~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 336 AAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 8999999999999999999999999999853
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=283.24 Aligned_cols=275 Identities=18% Similarity=0.192 Sum_probs=202.7
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
.+++++.+|.+.|++++|+|++++|++++.||+|++||+.+++...
T Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~---------------------------------- 91 (377)
T 3dwl_C 46 KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWK---------------------------------- 91 (377)
T ss_dssp EECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCC----------------------------------
T ss_pred EEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCcee----------------------------------
Confidence 3567889999999999999999999999999999999987665110
Q ss_pred eEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeE-EEeEEEeC-CCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy14815 82 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF-ECNATLEG-HENEVKSVTWSKNGQFLATCSRDKSVW 159 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~-~~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~dg~i~ 159 (479)
......+|...|.+++|+|++++|++++.|+.|++||+++++. .....+.. |...|.+++|+|++++|++++.||.|+
T Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~ 171 (377)
T 3dwl_C 92 QTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAY 171 (377)
T ss_dssp CEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEE
T ss_pred eeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEE
Confidence 0111357899999999999999999999999999999988751 13566777 999999999999999999999999999
Q ss_pred EEEeCCCC---------------ceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCC
Q psy14815 160 VWEVGEED---------------EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSH 224 (479)
Q Consensus 160 vwd~~~~~---------------~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 224 (479)
+||++... .......+ .|...|++++|+|++++|++++.||.|++||++++......+..+..|
T Consensus 172 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 250 (377)
T 3dwl_C 172 VLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLS 250 (377)
T ss_dssp EEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECS
T ss_pred EEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCC
Confidence 99996321 12344455 899999999999999999999999999999999877544446778899
Q ss_pred CccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCC--CCCCCCCCCc-------------e---------EEEE----
Q psy14815 225 TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA--GIPTPDNDSV-------------W---------KCVC---- 276 (479)
Q Consensus 225 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~-------------~---------~~~~---- 276 (479)
...|.+++|+|++++|++++.++.+ +|+........ .+........ . ....
T Consensus 251 ~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (377)
T 3dwl_C 251 QLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDL 329 (377)
T ss_dssp SSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC------------------
T ss_pred CCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhh
Confidence 9999999999999999998866655 77665322100 0000000000 0 0000
Q ss_pred --------EEeccccccEEEEEecCCCC----eEEEEeCCCeEEEccc
Q psy14815 277 --------TLSGHHGRTIYDISWCHLTD----LIATACGDDAIRIFKE 312 (479)
Q Consensus 277 --------~~~~~~~~~i~~l~~~~~~~----~l~~~~~dg~i~vw~~ 312 (479)
.+...|...|+++++.+... .|++++.||.|++||+
T Consensus 330 ~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 330 KGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp -------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 11112488999999776443 6999999999999985
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-34 Score=264.89 Aligned_cols=271 Identities=21% Similarity=0.382 Sum_probs=225.0
Q ss_pred eEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcE
Q psy14815 14 VWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 93 (479)
Q Consensus 14 V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v 93 (479)
.++|+||+++ +||+|. |++|+|||+++++.+..+. ..+|...|
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~~~-----------------------------------~~~~~~~V 70 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQ-----------------------------------MEQPGEYI 70 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEE-----------------------------------CCSTTCCE
T ss_pred ceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEE-----------------------------------ecCCCCeE
Confidence 5789999876 777764 9999999998887655432 24788899
Q ss_pred EEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeee
Q psy14815 94 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA 173 (479)
Q Consensus 94 ~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 173 (479)
++++|+|++++|++|+.||+|++||+++++ .+..+.+|...+.++.+ ++..+++++.++.+++|+..... ....
T Consensus 71 ~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~--~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~--~~~~ 144 (318)
T 4ggc_A 71 SSVAWIKEGNYLAVGTSSAEVQLWDVQQQK--RLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAE--HHVA 144 (318)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS--CEEE
T ss_pred EEEEECCCCCEEEEEECCCcEEEeecCCce--eEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCc--eeEE
Confidence 999999999999999999999999999997 67788899988877665 56799999999999999988764 4556
Q ss_pred eeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEE---EEeeCCCeEE
Q psy14815 174 VINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL---ATCSDDATVK 250 (479)
Q Consensus 174 ~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l---~s~~~dg~i~ 250 (479)
.+.+|...+..+.+++++++|++++.||.|++||+++++...........+.+.|.++.++|++..+ ++++.++.|+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~ 224 (318)
T 4ggc_A 145 TLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIR 224 (318)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEE
T ss_pred EEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEE
Confidence 7788999999999999999999999999999999998775545566677788999999999987643 4677889999
Q ss_pred EEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe--CCCeEEEcccCCCCCCCCceeeEEEe
Q psy14815 251 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC--GDDAIRIFKENPEAGDSDMVSFDLVH 328 (479)
Q Consensus 251 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~--~dg~i~vw~~~~~~~~~~~~~~~~~~ 328 (479)
+||..... ...... +...+..+.|+|++..+++++ .|+.|++||+.+++ ++
T Consensus 225 lwd~~~~~---------------~~~~~~--~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~---------~~- 277 (318)
T 4ggc_A 225 IWNVCSGA---------------CLSAVD--AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA---------KV- 277 (318)
T ss_dssp EEETTTCC---------------EEEEEE--CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC---------EE-
T ss_pred EEeccccc---------------cccccc--ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc---------EE-
Confidence 99975432 222222 256899999999999887665 79999999999987 33
Q ss_pred ccccccccceeEEEecCCCCCCCccc
Q psy14815 329 TEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 329 ~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
..+.+|.+.|++++|+|++++|++++
T Consensus 278 ~~l~gH~~~V~~l~~spdg~~l~S~s 303 (318)
T 4ggc_A 278 AELKGHTSRVLSLTMSPDGATVASAA 303 (318)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEE
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 44579999999999999999997765
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-35 Score=279.28 Aligned_cols=280 Identities=20% Similarity=0.291 Sum_probs=221.8
Q ss_pred ceEEEEECCCCCeE-EEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC
Q psy14815 13 RVWNVSWNPQGTMI-SSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR 91 (479)
Q Consensus 13 ~V~~l~~s~~~~~l-~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 91 (479)
....++++|+...+ ++++.||.|+||++......... .....+|..
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~---------------------------------~~~~~~h~~ 82 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKN---------------------------------VPLVCGHTA 82 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTT---------------------------------CCCBCCCSS
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCC---------------------------------CceEecCCC
Confidence 34567888876544 45788999999998543321100 011257999
Q ss_pred cEEEEEECC-CCCEEEEEECCCeEEEEECCCCeE-----EEeEEEeCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEEeC
Q psy14815 92 TIRETAWSP-CGNFIASASFDATTAVWDKRSGQF-----ECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVG 164 (479)
Q Consensus 92 ~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~vwd~~ 164 (479)
.|++++|+| ++++|++|+.||.|++||+.++.. .....+.+|...|.+++|+|++ ++|++++.||.|++||++
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 162 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVG 162 (402)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETT
T ss_pred CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECC
Confidence 999999999 899999999999999999988732 2567888999999999999998 699999999999999999
Q ss_pred CCCceeeeeee--eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeee-cCCCcc-EEEEEEccCCCEE
Q psy14815 165 EEDEYECAAVI--NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL-KSHTST-VWSLAFDRIGSRL 240 (479)
Q Consensus 165 ~~~~~~~~~~~--~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l 240 (479)
++ .....+ ..|...|.+++|+|++++|++++.||.|++||++++.. +..+ ..|.+. +.++.|+|++++|
T Consensus 163 ~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l 235 (402)
T 2aq5_A 163 TG---AAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTV----VAEKDRPHEGTRPVHAVFVSEGKIL 235 (402)
T ss_dssp TT---EEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE----EEEEECSSCSSSCCEEEECSTTEEE
T ss_pred CC---CccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCce----eeeeccCCCCCcceEEEEcCCCcEE
Confidence 87 555666 78999999999999999999999999999999997653 5555 677765 8999999999999
Q ss_pred EEe---eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEE-EeCCCeEEEcccCCCC
Q psy14815 241 ATC---SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT-ACGDDAIRIFKENPEA 316 (479)
Q Consensus 241 ~s~---~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~-~~~dg~i~vw~~~~~~ 316 (479)
++| +.|+.|++||++..... +......+...+.+++|+|++++|++ ++.||.|++|++..++
T Consensus 236 ~~g~~~~~d~~i~iwd~~~~~~~--------------~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 236 TTGFSRMSERQVALWDTKHLEEP--------------LSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp EEEECTTCCEEEEEEETTBCSSC--------------SEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred EEeccCCCCceEEEEcCccccCC--------------ceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 999 78999999999765432 12222223668999999999998865 5579999999998875
Q ss_pred CCCCceeeEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 317 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 317 ~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
. ....+... .|..+|.+++|+|++.+++..
T Consensus 302 ~-----~~~~l~~~--~~~~~v~~~~~sp~~~~~~s~ 331 (402)
T 2aq5_A 302 P-----FLHYLSMF--SSKESQRGMGYMPKRGLEVNK 331 (402)
T ss_dssp T-----CEEEEEEE--CCSSCCSEEEECCGGGSCGGG
T ss_pred c-----ceEeeccc--ccCCcccceEEecccccceec
Confidence 1 01112221 266899999999999988654
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=278.17 Aligned_cols=290 Identities=12% Similarity=0.137 Sum_probs=226.2
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC----------CccceEEEeecCCcEEEecCC
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL----------PVETSLRQLVEDKNIRLWGKE 73 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~~i~~w~~~ 73 (479)
.+.+.+| ..+....|+|++++|++|+.||.|++||+.+++....+..+ +.+..+++++.|+.+++||+.
T Consensus 91 ~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~ 169 (420)
T 3vl1_A 91 SKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVK 169 (420)
T ss_dssp TTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred eeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 3445555 45566678999999999999999999999988776665443 567788999999999999998
Q ss_pred CCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC---CCCcEEE-----------
Q psy14815 74 SFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG---HENEVKS----------- 139 (479)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~---~~~~v~~----------- 139 (479)
..... ....+|...|.+++|+|++++|++++.|+.|++||+++++ ....+.. +...+.+
T Consensus 170 ~~~~~-----~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 242 (420)
T 3vl1_A 170 DGSNP-----RTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT--TIHTFNRKENPHDGVNSIALFVGTDRQL 242 (420)
T ss_dssp TCCCC-----EEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE--EEEEECBTTBTTCCEEEEEEEECCCSSC
T ss_pred CCcCc-----eEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc--eeEEeecCCCCCCCccEEEEecCCccee
Confidence 53322 1235799999999999999999999999999999999986 4555553 3344444
Q ss_pred ----------EEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCC-EEEEEEcCCcEEEEec
Q psy14815 140 ----------VTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASASYDDTVKLFKE 208 (479)
Q Consensus 140 ----------l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~i~d~ 208 (479)
++|+|++++|++|+.||.|++||+++.+. .......|...|++++|+|+++ +|++|+.||.|++||+
T Consensus 243 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~ 320 (420)
T 3vl1_A 243 HEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQ--TIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDL 320 (420)
T ss_dssp GGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCE--EEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred eecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCce--eEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEc
Confidence 45578899999999999999999998742 2333456888999999999998 9999999999999999
Q ss_pred CCcccceEeeeeecC-CCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEE
Q psy14815 209 DKAEADWINFATLKS-HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIY 287 (479)
Q Consensus 209 ~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 287 (479)
+++.. ++..+.. |...|.++.+ +++++|++++.|+.|++|++........+... .....+..+ ...|.
T Consensus 321 ~~~~~---~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~------~~~~~~~~~-~~~v~ 389 (420)
T 3vl1_A 321 RSPEC---PVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEF------ETPTFLVSN-DDAVS 389 (420)
T ss_dssp TCTTS---CSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECT------TSCEEECCS-SCCCC
T ss_pred CCCcC---chhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceec------cCccEEccC-CcceE
Confidence 97653 2344444 6778888855 57889999999999999999775443322111 001223444 77899
Q ss_pred EEEecCCCC---eEEEEeCCCeEEEcccCC
Q psy14815 288 DISWCHLTD---LIATACGDDAIRIFKENP 314 (479)
Q Consensus 288 ~l~~~~~~~---~l~~~~~dg~i~vw~~~~ 314 (479)
+++|+|+++ .+++++.+|.+.+|++..
T Consensus 390 ~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 390 QFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp EEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred EEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 999999999 777778899999999864
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-34 Score=277.17 Aligned_cols=279 Identities=20% Similarity=0.328 Sum_probs=229.4
Q ss_pred ccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCC--------ccceEEEeecCCcEEEecCCCCCCc
Q psy14815 7 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLP--------VETSLRQLVEDKNIRLWGKESFGNK 78 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~--------~~~~~~~~~~~~~i~~w~~~~~~~~ 78 (479)
..+|...|+|++| ++++|++|+.||+|++||+.+++....+..+. ++..+++++.|+.+++||+.....
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~- 205 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEM- 205 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCE-
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcE-
Confidence 3467788999887 78999999999999999999988887776653 456788899999999999985321
Q ss_pred eeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEE-EeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc
Q psy14815 79 FTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE-CNATLEGHENEVKSVTWSKNGQFLATCSRDKS 157 (479)
Q Consensus 79 ~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~ 157 (479)
.....+|...|.+++|++ ..+++|+.||.|++||+.+++.. ....+.+|...|.+++| +++++++|+.||.
T Consensus 206 ----~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~ 277 (435)
T 1p22_A 206 ----LNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRT 277 (435)
T ss_dssp ----EEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSE
T ss_pred ----EEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCe
Confidence 222357999999999974 59999999999999999887532 23677889999999999 6889999999999
Q ss_pred EEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC
Q psy14815 158 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG 237 (479)
Q Consensus 158 i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 237 (479)
|++||+++. ..+..+..|...|.++.|+ ++++++|+.||.|++||++++.. +..+.+|...|.+++| ++
T Consensus 278 i~vwd~~~~---~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~----~~~~~~h~~~v~~~~~--~~ 346 (435)
T 1p22_A 278 IKVWNTSTC---EFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGAC----LRVLEGHEELVRCIRF--DN 346 (435)
T ss_dssp EEEEETTTC---CEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEC--CS
T ss_pred EEEEECCcC---cEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCE----EEEEeCCcCcEEEEEe--cC
Confidence 999999987 5667788899999999995 68999999999999999997653 7788899999999999 68
Q ss_pred CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 238 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 238 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
++|++|+.||.|++||+......... ....++..+.+| ...|.+++| ++.+|++++.||.|++||+....
T Consensus 347 ~~l~sg~~dg~i~vwd~~~~~~~~~~------~~~~~~~~~~~h-~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 347 KRIVSGAYDGKIKVWDLVAALDPRAP------AGTLCLRTLVEH-SGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp SEEEEEETTSCEEEEEHHHHTSTTSC------TTTTEEEEECCC-SSCCCCEEE--CSSCEEECCSSSEEEEEC-----
T ss_pred CEEEEEeCCCcEEEEECCCCCCcccc------ccchheeeccCC-CCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCC
Confidence 89999999999999998665432111 111256777786 789999999 78899999999999999998865
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-34 Score=288.91 Aligned_cols=299 Identities=16% Similarity=0.218 Sum_probs=245.4
Q ss_pred cccccceEEEEECCCCCeEEEeeCCCcEEEEecccc----cccccccC-----------CC--ccceEEEeecCCcEEEe
Q psy14815 8 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIR----EPYEKLHG-----------LP--VETSLRQLVEDKNIRLW 70 (479)
Q Consensus 8 ~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~----~~~~~~~~-----------~~--~~~~~~~~~~~~~i~~w 70 (479)
..|.+.|++++|+|++++|++++ ++.|++||+.++ +....+.. .+ ++..+++++.|+.+++|
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw 93 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW 93 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEE
T ss_pred CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEE
Confidence 46899999999999999999998 889999999987 65544443 35 66788888899999999
Q ss_pred cCCCCCC---ceeeeEEeccccCCcEEEEEECCCCCEEEEEECC----CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEc
Q psy14815 71 GKESFGN---KFTAKAILSDGHQRTIRETAWSPCGNFIASASFD----ATTAVWDKRSGQFECNATLEGHENEVKSVTWS 143 (479)
Q Consensus 71 ~~~~~~~---~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~ 143 (479)
++..... ...........|...|.+++|+|++++|++++.+ +.|++|| .++ ....+.+|...|.+++|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~--~~~~~~~~~~~v~~~~~~ 169 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGN--SLGEVSGHSQRINACHLK 169 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCC--EEEECCSCSSCEEEEEEC
T ss_pred eCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCC--cceeeecCCccEEEEEEC
Confidence 9963210 0112222345789999999999999999999988 6899998 343 567788999999999999
Q ss_pred CCCC-EEEEEeCCCcEEEEEeCCCCceeeeeeeecccc---ceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEee
Q psy14815 144 KNGQ-FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ---DVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINF 218 (479)
Q Consensus 144 ~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~---~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 218 (479)
|++. .+++++.||.|++||+.+. +....+..|.. .|++++|+|+ +++|++++.||.|++||+++++. +
T Consensus 170 ~~~~~~l~~~~~d~~v~vwd~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~----~ 242 (615)
T 1pgu_A 170 QSRPMRSMTVGDDGSVVFYQGPPF---KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEF----L 242 (615)
T ss_dssp SSSSCEEEEEETTTEEEEEETTTB---EEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCE----E
T ss_pred CCCCcEEEEEeCCCcEEEEeCCCc---ceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCE----e
Confidence 9997 8999999999999999876 66677888888 9999999999 99999999999999999987663 5
Q ss_pred eee-c---CCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc---ccccEEEEEe
Q psy14815 219 ATL-K---SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH---HGRTIYDISW 291 (479)
Q Consensus 219 ~~~-~---~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~l~~ 291 (479)
..+ . .|...|.+++|+ ++++|++++.|+.|++||++.. +++..+..+ ....+.++.|
T Consensus 243 ~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~---------------~~~~~~~~~~~~~~~~~~~~~~ 306 (615)
T 1pgu_A 243 KYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTS---------------KCVQKWTLDKQQLGNQQVGVVA 306 (615)
T ss_dssp EECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTT---------------EEEEEEECCTTCGGGCEEEEEE
T ss_pred EEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCC---------------cEEEEEcCCCCcccCceeEEEe
Confidence 556 5 899999999999 9999999999999999998533 455666654 2467888888
Q ss_pred cCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCC
Q psy14815 292 CHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV 346 (479)
Q Consensus 292 ~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 346 (479)
. ++.++++++.||.|++||+..++ ......+|..+|++++| |+
T Consensus 307 ~-~~~~l~~~~~~g~i~~~d~~~~~----------~~~~~~~~~~~v~~~~~-~~ 349 (615)
T 1pgu_A 307 T-GNGRIISLSLDGTLNFYELGHDE----------VLKTISGHNKGITALTV-NP 349 (615)
T ss_dssp E-ETTEEEEEETTSCEEEEETTEEE----------EEEEECCCSSCEEEEET-TT
T ss_pred C-CCCeEEEEECCCCEEEEECCCCc----------EEEEEeCCCCCEEEEEe-cC
Confidence 6 88999999999999999998765 33333567777777777 66
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-34 Score=274.04 Aligned_cols=250 Identities=20% Similarity=0.376 Sum_probs=211.5
Q ss_pred cccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 6 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 6 ~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
.+.+|...|++++|+|+|++|++|+.||+|+|||+++++.+..+
T Consensus 142 ~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~------------------------------------ 185 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM------------------------------------ 185 (420)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE------------------------------------
T ss_pred EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEE------------------------------------
Confidence 34578899999999999999999999999999999887765443
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCC
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~ 165 (479)
.+|...+.+++++ +..+++|+.|+.+++||..... ..+..+.+|...+..+.|+|+++++++++.|+.+++|+...
T Consensus 186 -~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~-~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~ 261 (420)
T 4gga_A 186 -TSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAE-HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 261 (420)
T ss_dssp -CCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSS-CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred -eCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccc-eeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecc
Confidence 5788899988875 6799999999999999998765 35677889999999999999999999999999999999987
Q ss_pred CCc-eeeeeeeeccccceeEEEEecCC-CEEEEE--EcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE
Q psy14815 166 EDE-YECAAVINAHIQDVKKVRFHPFD-NILASA--SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 166 ~~~-~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~--~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 241 (479)
.+. .........|...|.+++|+|.+ .+++++ +.|++|++||+.++.. ...+. +...+.++.|+++++.++
T Consensus 262 ~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~----~~~~~-~~~~v~~~~~~~~~~~lv 336 (420)
T 4gga_A 262 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC----LSAVD-AHSQVCSILWSPHYKELI 336 (420)
T ss_dssp CSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEE----EEEEE-CSSCEEEEEEETTTTEEE
T ss_pred ccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccc----ceeec-cccceeeeeecCCCCeEE
Confidence 642 23345677888999999999965 555554 4799999999997663 44444 346788999999999988
Q ss_pred Eee--CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 242 TCS--DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 242 s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+++ .|+.|++||+.. ++++.++.+| ...|++++|+|+|++|++|+.|++|++||+....
T Consensus 337 ~~sg~~d~~I~iwd~~~---------------~~~v~~l~gH-~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 337 SGHGFAQNQLVIWKYPT---------------MAKVAELKGH-TSRVLSLTMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp EEECTTTCCEEEEETTT---------------CCEEEEECCC-SSCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred EEEecCCCEEEEEECCC---------------CcEEEEEcCC-CCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 765 789999999843 3668889997 7899999999999999999999999999997654
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=272.59 Aligned_cols=273 Identities=22% Similarity=0.223 Sum_probs=215.8
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
+++++.+|...|++++|+|++++|++++.||.|++||+.+++....
T Consensus 44 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~---------------------------------- 89 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPT---------------------------------- 89 (372)
T ss_dssp EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEE----------------------------------
T ss_pred eeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeee----------------------------------
Confidence 5678889999999999999999999999999999999876543221
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeE--EEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF--ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
.....|...|.+++|+|++++|++++.|+.|++||+..++. ........|...|.+++|+|++++|++++.||.|++
T Consensus 90 -~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~ 168 (372)
T 1k8k_C 90 -LVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRI 168 (372)
T ss_dssp -EECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred -EEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEE
Confidence 11246889999999999999999999999999999987652 122333678899999999999999999999999999
Q ss_pred EEeCCC---------------CceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCC
Q psy14815 161 WEVGEE---------------DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT 225 (479)
Q Consensus 161 wd~~~~---------------~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 225 (479)
||++.. ........+..|...+.+++|+|++++|++++.||.|++||+++++. +..+..|.
T Consensus 169 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~ 244 (372)
T 1k8k_C 169 FSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMA----VATLASET 244 (372)
T ss_dssp EECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTE----EEEEECSS
T ss_pred EEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCce----eEEEccCC
Confidence 997521 01145666778999999999999999999999999999999997663 67778899
Q ss_pred ccEEEEEEccCCCEEEEeeCCCeEEEEeccC--CC--CCCCCCCCCC---------------CCceEEE------EEEe-
Q psy14815 226 STVWSLAFDRIGSRLATCSDDATVKIWKEYK--PG--NSAGIPTPDN---------------DSVWKCV------CTLS- 279 (479)
Q Consensus 226 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~--~~~~~~~~~~---------------~~~~~~~------~~~~- 279 (479)
..|.+++|+|++++++++ .|+.|++|++.. +. ....+..+.. ....... ..+.
T Consensus 245 ~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (372)
T 1k8k_C 245 LPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDS 323 (372)
T ss_dssp CCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSS
T ss_pred CCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccc
Confidence 999999999999988877 899999999977 21 0000000000 0001111 2333
Q ss_pred ccccccEEEEEec-CCC---CeEEEEeCCCeEEEcccCCCC
Q psy14815 280 GHHGRTIYDISWC-HLT---DLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 280 ~~~~~~i~~l~~~-~~~---~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+| ..+|++++|+ +++ .+|++|+.||.|++|++.+.+
T Consensus 324 ~h-~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 324 LH-KNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp SS-SSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred cc-cCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 54 8899999977 566 899999999999999997754
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-34 Score=267.43 Aligned_cols=260 Identities=19% Similarity=0.271 Sum_probs=208.6
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
+.+++++|...|++++|+|++++|++++.|+.|++|+.........
T Consensus 78 ~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~---------------------------------- 123 (340)
T 4aow_A 78 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRR---------------------------------- 123 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE----------------------------------
T ss_pred eeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeee----------------------------------
Confidence 4578899999999999999999999999999999999765443222
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCC--CEEEEEeCCCcEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG--QFLATCSRDKSVWV 160 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~--~~l~~~~~dg~i~v 160 (479)
...+...+..+.+++++.+|++++.|+.+++||+.... .......+|...+.+++|++++ .++++++.|+.|++
T Consensus 124 ---~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i 199 (340)
T 4aow_A 124 ---FVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC-KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV 199 (340)
T ss_dssp ---EECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE-EEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEE
T ss_pred ---ecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCc-eEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEE
Confidence 13567788899999999999999999999999998765 3445567889999999999864 57889999999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEE
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 240 (479)
||+++. .....+.+|..+|++++|+|++++|++|+.||.|++||+++... +..+. +...|.++.|+|++. +
T Consensus 200 ~d~~~~---~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~----~~~~~-~~~~v~~~~~~~~~~-~ 270 (340)
T 4aow_A 200 WNLANC---KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH----LYTLD-GGDIINALCFSPNRY-W 270 (340)
T ss_dssp EETTTT---EEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEE----EEEEE-CSSCEEEEEECSSSS-E
T ss_pred EECCCC---ceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCce----eeeec-CCceEEeeecCCCCc-e
Confidence 999987 66677889999999999999999999999999999999997653 44554 446899999999875 4
Q ss_pred EEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 241 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 241 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
++++.|+.|++||++.......+.. ........+| ...|++++|+|++++|++|+.||.|+|||+.++.
T Consensus 271 ~~~~~d~~i~iwd~~~~~~~~~~~~------~~~~~~~~~h-~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 271 LCAATGPSIKIWDLEGKIIVDELKQ------EVISTSSKAE-PPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEETTEEEEEETTTTEEEEEECC------C-------CC-CCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred eeccCCCEEEEEECCCCeEEEeccc------cceeeeccCC-CCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 5666799999999854322111000 0111223344 7799999999999999999999999999998875
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-34 Score=299.85 Aligned_cols=321 Identities=17% Similarity=0.235 Sum_probs=253.2
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC----------CccceEEEeecCCcEEEecC
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL----------PVETSLRQLVEDKNIRLWGK 72 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~~i~~w~~ 72 (479)
.++++.+|.+.|++++|+|++++|++|+.||.|++||+.+++.+..+..+ +++..+++++.++.+++|++
T Consensus 47 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 126 (814)
T 3mkq_A 47 EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW 126 (814)
T ss_dssp EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEG
T ss_pred eEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEEC
Confidence 45678899999999999999999999999999999999998877766544 56678889999999999999
Q ss_pred CCCCCceeeeEEeccccCCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEEeC-CCCcEEEEEEcC--CCCE
Q psy14815 73 ESFGNKFTAKAILSDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEG-HENEVKSVTWSK--NGQF 148 (479)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~l~~~~--~~~~ 148 (479)
+... .......+|...|.+++|+| ++..+++++.||.|++||+.+++ ....+.. +...+.+++|+| ++.+
T Consensus 127 ~~~~----~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~ 200 (814)
T 3mkq_A 127 ENNW----ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST--PNFTLTTGQERGVNYVDYYPLPDKPY 200 (814)
T ss_dssp GGTS----EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSS--CSEEEECCCTTCCCEEEECCSTTCCE
T ss_pred CCCc----eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--ceeEEecCCCCCEEEEEEEECCCCCE
Confidence 7421 12223467999999999999 88999999999999999998876 3344444 448899999999 9999
Q ss_pred EEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccE
Q psy14815 149 LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTV 228 (479)
Q Consensus 149 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v 228 (479)
+++++.||.|++||++++ .....+..|...|++++|+|+++++++++.||.|++||+.++.. ...+..|...+
T Consensus 201 l~~~~~dg~i~~~d~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~----~~~~~~~~~~v 273 (814)
T 3mkq_A 201 MITASDDLTIKIWDYQTK---SCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKV----EKTLNVGLERS 273 (814)
T ss_dssp EEEECTTSEEEEEETTTT---EEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSE----EEEECCSSSSE
T ss_pred EEEEeCCCEEEEEECCCC---cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE----EEEeecCCCcE
Confidence 999999999999999887 56677888999999999999999999999999999999987653 67778889999
Q ss_pred EEEEEccCCCE-EEEeeCCCeEEEEeccCCCCCCCCCCCC---------C-------------------CCceEEEEEEe
Q psy14815 229 WSLAFDRIGSR-LATCSDDATVKIWKEYKPGNSAGIPTPD---------N-------------------DSVWKCVCTLS 279 (479)
Q Consensus 229 ~~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~---------~-------------------~~~~~~~~~~~ 279 (479)
.+++|+|++.. +++++.++.+.+|++........+.... . .........+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (814)
T 3mkq_A 274 WCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELG 353 (814)
T ss_dssp EEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEEC
T ss_pred EEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCC
Confidence 99999999873 2444557778999876543221111000 0 00000011112
Q ss_pred ccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 280 GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 280 ~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
. +...+.+++|+|+|+++++++ |+.+.+|++.... ..+.+.+.+++|+|++++++.+
T Consensus 354 ~-~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~~---------------~~~~~~i~~~~~spdg~~la~~ 410 (814)
T 3mkq_A 354 S-VDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAWR---------------NKAFGKCQDFVWGPDSNSYALI 410 (814)
T ss_dssp C-CSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTTE---------------EEEEEECSEEEECTTSSCEEEE
T ss_pred C-CccCCceeEECCCCCEEEEec-CCEEEEEECcccc---------------ccCCCceEEEEEeCCCCeEEEE
Confidence 2 355789999999999999988 8999999976543 1345678899999999988654
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=268.37 Aligned_cols=253 Identities=15% Similarity=0.271 Sum_probs=217.8
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
+++++.+|...|++++|+|++++|++++.||.|++||+.+++.+..+
T Consensus 66 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--------------------------------- 112 (369)
T 3zwl_B 66 RLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATW--------------------------------- 112 (369)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEE---------------------------------
T ss_pred hhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe---------------------------------
Confidence 46778899999999999999999999999999999999876654332
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECC-----CeEEEEECCCCeE---------EEeEEEeCCCC--cEEEEEEcCCC
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFD-----ATTAVWDKRSGQF---------ECNATLEGHEN--EVKSVTWSKNG 146 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~d-----g~i~iwd~~~~~~---------~~~~~~~~~~~--~v~~l~~~~~~ 146 (479)
.+...+.+++|+|+++++++++.+ +.|++||+..+.. .....+..|.. .+.+++|+|++
T Consensus 113 -----~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (369)
T 3zwl_B 113 -----KSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKG 187 (369)
T ss_dssp -----ECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGG
T ss_pred -----ecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCC
Confidence 267889999999999999999999 9999999876531 12344555666 89999999999
Q ss_pred CEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCc
Q psy14815 147 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTS 226 (479)
Q Consensus 147 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 226 (479)
++|++++.||.|++||+++.. .....+..|...|.+++|+|++++|++++.||.|++||++++.. ...+. +..
T Consensus 188 ~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~----~~~~~-~~~ 260 (369)
T 3zwl_B 188 KYIIAGHKDGKISKYDVSNNY--EYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQV----LKKYE-TDC 260 (369)
T ss_dssp CEEEEEETTSEEEEEETTTTT--EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE----EEEEE-CSS
T ss_pred CEEEEEcCCCEEEEEECCCCc--EeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCce----eeeec-CCC
Confidence 999999999999999998832 56677888999999999999999999999999999999997663 34443 778
Q ss_pred cEEEEEEccCCCEEEEeeCCC--------------eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec
Q psy14815 227 TVWSLAFDRIGSRLATCSDDA--------------TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 292 (479)
Q Consensus 227 ~v~~~~~~~~~~~l~s~~~dg--------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 292 (479)
.+.+++|+|+++++++++.++ .+++||.... +++..+.+| ...|.+++|+
T Consensus 261 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~---------------~~~~~~~~~-~~~v~~~~~s 324 (369)
T 3zwl_B 261 PLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFE---------------EEIGRVQGH-FGPLNTVAIS 324 (369)
T ss_dssp CEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTC---------------CEEEEEECC-SSCEEEEEEC
T ss_pred CceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCC---------------cchhheecc-cCcEEEEEEC
Confidence 899999999999999999988 8999997433 556778887 7899999999
Q ss_pred CCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 293 HLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 293 ~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
|++++|++++.||.|++|+++.+.
T Consensus 325 ~~~~~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 325 PQGTSYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp TTSSEEEEEETTSEEEEEEECHHH
T ss_pred CCCCEEEEEcCCCeEEEEECcccc
Confidence 999999999999999999998754
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=278.19 Aligned_cols=279 Identities=20% Similarity=0.408 Sum_probs=219.7
Q ss_pred ccccccccceEEEEECCC-CCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 5 QTLKGHQGRVWNVSWNPQ-GTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~-~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
..+.+|.+.|++++|+|+ +.+|++++.||.|++||+.+....... ... ....
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~--------------------------~~~-~~~~ 174 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEP--------------------------SGE-CQPD 174 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCT--------------------------TCC-CCCS
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCc--------------------------ccc-CCCc
Confidence 345689999999999997 789999999999999998753211000 000 0011
Q ss_pred EeccccCCcEEEEEECCCCC-EEEEEECCCeEEEEECCCCe-----EEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCC
Q psy14815 84 ILSDGHQRTIRETAWSPCGN-FIASASFDATTAVWDKRSGQ-----FECNATLEGHENEVKSVTWSK-NGQFLATCSRDK 156 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~-~l~t~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg 156 (479)
....+|...|.+++|+|++. +|++|+.||.|++||+.++. ......+..|...|.+++|+| ++.+|++++.||
T Consensus 175 ~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg 254 (430)
T 2xyi_A 175 LRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQ 254 (430)
T ss_dssp EEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTS
T ss_pred EEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCC
Confidence 12357899999999999988 99999999999999998732 122456778999999999999 778999999999
Q ss_pred cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCC-EEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEcc
Q psy14815 157 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR 235 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 235 (479)
.|++||++..........+..|...|++++|+|+++ ++++|+.||.|++||++.... ++..+..|...|++++|+|
T Consensus 255 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~---~~~~~~~h~~~v~~i~~sp 331 (430)
T 2xyi_A 255 KLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL---KLHSFESHKDEIFQVQWSP 331 (430)
T ss_dssp EEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS---CSEEEECCSSCEEEEEECS
T ss_pred eEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC---CeEEeecCCCCEEEEEECC
Confidence 999999998743455666778999999999999886 688999999999999997442 4667788999999999999
Q ss_pred CCC-EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC-eEEEEeCCCeEEEcccC
Q psy14815 236 IGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKEN 313 (479)
Q Consensus 236 ~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~~dg~i~vw~~~ 313 (479)
+++ +|++++.|+.|++||+........... ........+..+.+| ...|++++|+|+++ +|++++.||.|++|++.
T Consensus 332 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 332 HNETILASSGTDRRLHVWDLSKIGEEQSTED-AEDGPPELLFIHGGH-TAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp SCTTEEEEEETTSCCEEEEGGGTTCCCCHHH-HHHCCTTEEEECCCC-SSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred CCCCEEEEEeCCCcEEEEeCCCCccccCccc-cccCCcceEEEcCCC-CCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 985 689999999999999976432211000 000011456666676 78999999999999 89999999999999987
Q ss_pred CC
Q psy14815 314 PE 315 (479)
Q Consensus 314 ~~ 315 (479)
..
T Consensus 410 ~~ 411 (430)
T 2xyi_A 410 EN 411 (430)
T ss_dssp HH
T ss_pred cc
Confidence 64
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-35 Score=282.65 Aligned_cols=255 Identities=16% Similarity=0.156 Sum_probs=198.7
Q ss_pred cccccccccceEEEEECC-CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 4 SQTLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
...+.+|.+.|++|+|+| ++++|+||+.||+|++||++++.....
T Consensus 157 ~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~---------------------------------- 202 (435)
T 4e54_B 157 FIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVF---------------------------------- 202 (435)
T ss_dssp EECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEE----------------------------------
T ss_pred EEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEE----------------------------------
Confidence 345679999999999998 789999999999999999864332111
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ-FLATCSRDKSVWVW 161 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~vw 161 (479)
.....+...+.+++|+|++.+|++|+.||.|++||++.. .+..+.+|...|.+++|+|++. +|++|+.|+.|++|
T Consensus 203 -~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~---~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iw 278 (435)
T 4e54_B 203 -ASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK---ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIW 278 (435)
T ss_dssp -ECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC---BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEE
T ss_pred -eccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc---eeEEEecccceEEeeeecCCCceEEEEecCcceeeEE
Confidence 011234556889999999999999999999999999765 4567889999999999999876 78899999999999
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCc------cEEEEEEcc
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTS------TVWSLAFDR 235 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~------~v~~~~~~~ 235 (479)
|++..+.........+|...|++++|+|++++|++++.||.|++||++++.. ...+..|.. .+....|+|
T Consensus 279 d~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 354 (435)
T 4e54_B 279 DLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDC----PLGLIPHPHRHFQHLTPIKAAWHP 354 (435)
T ss_dssp ETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSS----EEEECCCCCCCCSSSCCCBCEECS
T ss_pred ecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCcc----ceEEecccccccccceeEEEEEcC
Confidence 9998755445555678999999999999999999999999999999997664 222322221 233456677
Q ss_pred CCCEEEEee------------CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEE-EecCCCCeEEEEe
Q psy14815 236 IGSRLATCS------------DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI-SWCHLTDLIATAC 302 (479)
Q Consensus 236 ~~~~l~s~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l-~~~~~~~~l~~~~ 302 (479)
++..+++++ .++.|++||...+ +++..+..++...|.++ +|+|+|++|++|+
T Consensus 355 ~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g---------------~~~~~l~~~~~~~v~s~~~fspdg~~lasg~ 419 (435)
T 4e54_B 355 RYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSG---------------KMMCQLYDPESSGISSLNEFNPMGDTLASAM 419 (435)
T ss_dssp SSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSC---------------CEEEEECCSSCCCCCCEEEECTTSSCEEEEC
T ss_pred CCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCC---------------cEEEEEeCCCCCcEEEEEEECCCCCEEEEEc
Confidence 666666553 3457999997433 45666665567788887 6999999999876
Q ss_pred CCCeEEEcccCCCC
Q psy14815 303 GDDAIRIFKENPEA 316 (479)
Q Consensus 303 ~dg~i~vw~~~~~~ 316 (479)
|+.|+||+++.++
T Consensus 420 -d~~i~iW~~~~gk 432 (435)
T 4e54_B 420 -GYHILIWSQQEAR 432 (435)
T ss_dssp -SSEEEECCCC---
T ss_pred -CCcEEEEECCcCe
Confidence 7899999998876
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=275.82 Aligned_cols=312 Identities=11% Similarity=0.040 Sum_probs=222.4
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEeccccc---ccccccCCCcc-------------ceEEEeecCC-cEEEecCC
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIRE---PYEKLHGLPVE-------------TSLRQLVEDK-NIRLWGKE 73 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~---~~~~~~~~~~~-------------~~~~~~~~~~-~i~~w~~~ 73 (479)
..++++++|+|+|++|+++ .++.|++||+.+++ .+..+...... ..+.....+. ....-...
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3689999999999977666 47899999999998 55554432110 0000000000 00000000
Q ss_pred C---CCCceeeeEEeccccCCcEEEEEECCCCCEE-EEEECCCeEEEEECC--CCeEEEeEEEeCCCCcEEEEEEcCCCC
Q psy14815 74 S---FGNKFTAKAILSDGHQRTIRETAWSPCGNFI-ASASFDATTAVWDKR--SGQFECNATLEGHENEVKSVTWSKNGQ 147 (479)
Q Consensus 74 ~---~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l-~t~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~v~~l~~~~~~~ 147 (479)
. .............+|...|++++|+|++++| ++++.||.|++||+. +++.........|...|.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 0 0000000011123677789999999999996 899999999999998 775333322236778999999999999
Q ss_pred EEEEEeCCCcEEEEEeCCCCcee-eeeeeeccccceeEEEEecC---CCEEEEEEcCCcEEEEecCCcccceEeeee-ec
Q psy14815 148 FLATCSRDKSVWVWEVGEEDEYE-CAAVINAHIQDVKKVRFHPF---DNILASASYDDTVKLFKEDKAEADWINFAT-LK 222 (479)
Q Consensus 148 ~l~~~~~dg~i~vwd~~~~~~~~-~~~~~~~~~~~v~~l~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~ 222 (479)
+|++|+.+|.+++|++.+..... ....+.+|...|++++|+|+ +++|++|+.|+.|++||++++.. +.. +.
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~----~~~~~~ 238 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFI----VDKWLF 238 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTC----EEEECC
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCce----eeeeec
Confidence 99999999999999998875433 44467889999999999999 99999999999999999987664 333 56
Q ss_pred CCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEec----------------------
Q psy14815 223 SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG---------------------- 280 (479)
Q Consensus 223 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 280 (479)
+|...|.+++|+ ++++|++++.|+.|++||+.... ++..+..
T Consensus 239 ~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (450)
T 2vdu_B 239 GHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGK---------------NLSTFDYNSLIKPYLNDQHLAPPRFQNEN 302 (450)
T ss_dssp CCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCC---------------EEEEEECHHHHGGGCCTTSBC--------
T ss_pred CCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCc---------------Eeeeecchhhhhhhhhhcccccccccccc
Confidence 899999999999 99999999999999999986543 2333321
Q ss_pred --cccccEEEEEecCCCCeEEEEe-CCCeEEEccc--CCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCC
Q psy14815 281 --HHGRTIYDISWCHLTDLIATAC-GDDAIRIFKE--NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 281 --~~~~~i~~l~~~~~~~~l~~~~-~dg~i~vw~~--~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 351 (479)
.....|.+++|+|++++|++++ .|+.|++|++ ..+. .+.++..+ ..| +.|.+++|+|++.+++
T Consensus 303 ~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~------~l~~~~~~-~~~-~~v~~~~~~~~~~~v~ 370 (450)
T 2vdu_B 303 NDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKG------DLALKQII-TFP-YNVISLSAHNDEFQVT 370 (450)
T ss_dssp --CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTT------CEEEEEEE-ECS-SCEEEEEEETTEEEEE
T ss_pred cccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCC------ceeeccEe-ccC-CceEEEEecCCcEEEE
Confidence 1245799999999999999999 8999999999 4331 11233333 355 7899999999654443
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=269.96 Aligned_cols=250 Identities=13% Similarity=0.095 Sum_probs=199.2
Q ss_pred cccccceEEEEECC-CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 8 KGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 8 ~~h~~~V~~l~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
.+|...|++++|+| ++++|++++.|+.|++||+.+ .....+ ...
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~----------------------------------~~~ 159 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVF----------------------------------AKT 159 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEE----------------------------------ECC
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEE----------------------------------ecc
Confidence 47999999999999 789999999999999999864 221111 111
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEEeCC
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ-FLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~vwd~~~ 165 (479)
..|...|.+++|+|++++|++|+.|+.|++||++ ++ ....+..|...|.+++|+|+++ +|++++.|+.|++||+++
T Consensus 160 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~--~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 160 DSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GH--EIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp CCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SC--EEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred CCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CC--EEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 3566889999999999999999999999999995 43 5678889999999999999998 999999999999999997
Q ss_pred CCce-eeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeee---eecCCC----------ccEEE
Q psy14815 166 EDEY-ECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFA---TLKSHT----------STVWS 230 (479)
Q Consensus 166 ~~~~-~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~~~----------~~v~~ 230 (479)
.+.. .....+ .|...|++++|+| ++++|++++.|+.|++||++++........ ....|. ..+..
T Consensus 237 ~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 315 (383)
T 3ei3_B 237 IKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIV 315 (383)
T ss_dssp CCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEE
T ss_pred CCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceE
Confidence 4321 333333 6899999999999 999999999999999999987664211110 001122 34555
Q ss_pred EEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc-ccccEEEEEecCCCCeEEEEeCCCeEEE
Q psy14815 231 LAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGRTIYDISWCHLTDLIATACGDDAIRI 309 (479)
Q Consensus 231 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~dg~i~v 309 (479)
++|+|++++ +++.|+.|++||+... +++..+.++ +...+..++|+|++++|++++ ||.|++
T Consensus 316 ~~~s~dg~~--s~s~d~~i~iwd~~~~---------------~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~i 377 (383)
T 3ei3_B 316 AGRYPDDQL--LLNDKRTIDIYDANSG---------------GLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILI 377 (383)
T ss_dssp EECBCCTTT--CTTCCCCEEEEETTTC---------------CEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEE
T ss_pred EEecCCccc--ccCCCCeEEEEecCCC---------------ceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEE
Confidence 777777776 7889999999998443 556777765 366778889999999999997 999999
Q ss_pred cccCC
Q psy14815 310 FKENP 314 (479)
Q Consensus 310 w~~~~ 314 (479)
||+++
T Consensus 378 w~~~~ 382 (383)
T 3ei3_B 378 WNRED 382 (383)
T ss_dssp EECC-
T ss_pred EecCC
Confidence 99875
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-33 Score=269.30 Aligned_cols=274 Identities=27% Similarity=0.459 Sum_probs=232.7
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCc--------cceEEEeecCCcEEEecCCC
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPV--------ETSLRQLVEDKNIRLWGKES 74 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~w~~~~ 74 (479)
+++++.+|.+.|++++|+ +++|++|+.||+|++||+.+++.+..+..+.. +..+++++.|+.+++||+..
T Consensus 151 ~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~ 228 (445)
T 2ovr_B 151 CLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET 228 (445)
T ss_dssp EEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSS
T ss_pred EEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCC
Confidence 467889999999999998 67999999999999999999988887776533 46688889999999999985
Q ss_pred CCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC
Q psy14815 75 FGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 154 (479)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~ 154 (479)
... .....+|...|.+++| ++.++++|+.||.|++||+++++ ....+.+|...|.++.| ++.++++++.
T Consensus 229 ~~~-----~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~ 297 (445)
T 2ovr_B 229 GQC-----LHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETET--CLHTLQGHTNRVYSLQF--DGIHVVSGSL 297 (445)
T ss_dssp CCE-----EEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTE--EEEEECCCSSCEEEEEE--CSSEEEEEET
T ss_pred CcE-----EEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCc--EeEEecCCCCceEEEEE--CCCEEEEEeC
Confidence 321 1223579999999999 68899999999999999999886 67788899999999999 7889999999
Q ss_pred CCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC---CCccEEEE
Q psy14815 155 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS---HTSTVWSL 231 (479)
Q Consensus 155 dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---~~~~v~~~ 231 (479)
||.|++||++++ .....+..|...+.++.++ ++++++|+.||.|++||+++++. +..+.. |...|+++
T Consensus 298 d~~i~i~d~~~~---~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~----~~~~~~~~~~~~~v~~~ 368 (445)
T 2ovr_B 298 DTSIRVWDVETG---NCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQC----LQTLQGPNKHQSAVTCL 368 (445)
T ss_dssp TSCEEEEETTTC---CEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCE----EEEECSTTSCSSCEEEE
T ss_pred CCeEEEEECCCC---CEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcE----EEEEccCCCCCCCEEEE
Confidence 999999999987 5566778898899888875 67999999999999999987653 455554 88999999
Q ss_pred EEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEe----ccccccEEEEEecCCCCeEEEEeCCCe-
Q psy14815 232 AFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS----GHHGRTIYDISWCHLTDLIATACGDDA- 306 (479)
Q Consensus 232 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~l~~~~~~~~l~~~~~dg~- 306 (479)
+|+ +++|++|+.||.|++||+..+ +.+..+. ..+...|++++|+|++.++++|+.||+
T Consensus 369 ~~~--~~~l~s~~~dg~v~iwd~~~~---------------~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~ 431 (445)
T 2ovr_B 369 QFN--KNFVITSSDDGTVKLWDLKTG---------------EFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTE 431 (445)
T ss_dssp EEC--SSEEEEEETTSEEEEEETTTC---------------CEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSS
T ss_pred EEC--CCEEEEEeCCCeEEEEECCCC---------------ceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCC
Confidence 996 679999999999999998544 3344441 234789999999999999999999997
Q ss_pred ---EEEcccCCC
Q psy14815 307 ---IRIFKENPE 315 (479)
Q Consensus 307 ---i~vw~~~~~ 315 (479)
|.+||++..
T Consensus 432 ~~~l~v~df~~~ 443 (445)
T 2ovr_B 432 ETKLLVLDFDVD 443 (445)
T ss_dssp CCEEEEEECCCC
T ss_pred ccEEEEEECCCC
Confidence 999998764
|
| >2gx8_A NIF3-related protein; structural genomics, unknown function, protein structure initiative, midwest center for structural genomics, MCSG; HET: EPE; 2.20A {Bacillus cereus} SCOP: c.135.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=278.58 Aligned_cols=120 Identities=33% Similarity=0.596 Sum_probs=116.1
Q ss_pred ccHHHHHHHHHHhCCCccCCCCCcceeeeccCCCcCcccEEEEEecCCHHHHHHHHHcCCCEEEEeCCCCcccccccCcC
Q psy14815 355 LTLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIAYHPPIFAPLKRVTND 434 (479)
Q Consensus 355 ~~~~~~~~~l~~~~p~~~a~~wd~~Gl~v~~~~~~~~v~~il~~~d~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~ 434 (479)
+++.+++..+++++|+.++++|||+|||||.++ ++|++|++++|+|+++++||+++|||+||+|||+||+|+|+++.+
T Consensus 29 m~~~eii~~le~~aP~~lae~wDnvGL~vG~~~--~~V~~Vl~alD~t~~Vv~eAi~~gadlIItHHPlif~~lk~i~~~ 106 (397)
T 2gx8_A 29 PNGHEIISLFESMYPKHLAMEGDKIGLQIGALN--KPVRHVLIALDVTEEVVDEAIQLGANVIIAHHPLIFNPLKAIHTD 106 (397)
T ss_dssp CBHHHHHHHHHHHSCGGGSCTTCCCEEEESCSS--SBCCEEEEESSCCHHHHHHHHHHTCCEEEESSCSCCSCCSCCCTT
T ss_pred ccHHHHHHHHHHhCCHhHcCCCCCCeeEeCCCc--cccCEEEEEEcCCHHHHHHHHHCCCCEEEECCccccCCccccCcC
Confidence 668899999999999999999999999997664 789999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHhcCceEEeccccccccCCCccccCCCcCCCC
Q psy14815 435 KWKERVVSTCLAHNIAVYSPHTTWDAIQEGRTKKAPPEVQVP 476 (479)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~h~~~d~~~~g~~~~~~~~~~~~ 476 (479)
++++|++.+||+|||+|||+|||||++++||||+||++|||.
T Consensus 107 ~~~~r~i~~li~~~Iavya~HTnlD~~~~GvNd~LA~~LGl~ 148 (397)
T 2gx8_A 107 KAYGKIIEKCIKNDIAIYAAHTNVDVAKGGVNDLLAEALGLQ 148 (397)
T ss_dssp SHHHHHHHHHHHTTCEEEECCHHHHHSTTSHHHHHHHHTTCE
T ss_pred cHHHHHHHHHHHCCCeEEEeechhhcCCCCHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999975
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=265.80 Aligned_cols=249 Identities=22% Similarity=0.361 Sum_probs=212.1
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCcEEEEEe
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~vwd~ 163 (479)
..+|...|++++|+|++++|++|+.||.|++||+..+.......+.+|...|.+++|+++ +++|++++.||.|++||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~ 86 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 86 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEE
T ss_pred ecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEc
Confidence 368999999999999999999999999999999986666677889999999999999987 899999999999999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecC--CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEcc------
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPF--DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR------ 235 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~------ 235 (479)
++++ ......+..|...|++++|+|+ +++|++++.||.|++||++.... .....+..|...|.+++|+|
T Consensus 87 ~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~ 163 (379)
T 3jrp_A 87 ENGR-WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT--TSPIIIDAHAIGVNSASWAPATIEED 163 (379)
T ss_dssp ETTE-EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC--CCEEEEECCTTCEEEEEECCCC----
T ss_pred CCCc-eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc--eeeEEecCCCCceEEEEEcCcccccc
Confidence 9863 2356677789999999999999 99999999999999999987643 23445678999999999999
Q ss_pred -------CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCC---CCeEEEEeCCC
Q psy14815 236 -------IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL---TDLIATACGDD 305 (479)
Q Consensus 236 -------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~---~~~l~~~~~dg 305 (479)
++.+|++++.||.|++||++... ....+...+.+| ...|.+++|+|+ +.+|++++.||
T Consensus 164 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-----------~~~~~~~~~~~h-~~~v~~~~~sp~~~~~~~l~s~~~dg 231 (379)
T 3jrp_A 164 GEHNGTKESRKFVTGGADNLVKIWKYNSDA-----------QTYVLESTLEGH-SDWVRDVAWSPTVLLRSYLASVSQDR 231 (379)
T ss_dssp ------CTTCEEEEEETTSCEEEEEEETTT-----------TEEEEEEEECCC-SSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred ccccCCCCCCEEEEEeCCCeEEEEEecCCC-----------cceeeEEEEecc-cCcEeEEEECCCCCCCCeEEEEeCCC
Confidence 69999999999999999997543 234566777776 789999999999 89999999999
Q ss_pred eEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 306 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 306 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.|++||+..+... ..........|...|++++|+|++++|+.+.
T Consensus 232 ~i~iwd~~~~~~~-----~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 232 TCIIWTQDNEQGP-----WKKTLLKEEKFPDVLWRASWSLSGNVLALSG 275 (379)
T ss_dssp CEEEEEESSTTSC-----CEEEESSSSCCSSCEEEEEECSSSCCEEEEE
T ss_pred EEEEEeCCCCCcc-----ceeeeeccccCCCcEEEEEEcCCCCEEEEec
Confidence 9999999886421 1122233346889999999999999997654
|
| >2nyd_A UPF0135 protein SA1388; hypothetical protein SA1388, selenomethionine SAD, unknown F; 2.00A {Staphylococcus aureus subsp} PDB: 3lnl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=275.57 Aligned_cols=121 Identities=28% Similarity=0.490 Sum_probs=116.0
Q ss_pred ccccHHHHHHHHHHhCCCccCCCCCcceeeeccCCCcCcccEEEEEecCCHHHHHHHHHcCCCEEEEeCCCCcccccccC
Q psy14815 353 TNLTLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIAYHPPIFAPLKRVT 432 (479)
Q Consensus 353 ~~~~~~~~~~~l~~~~p~~~a~~wd~~Gl~v~~~~~~~~v~~il~~~d~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~ 432 (479)
..|++.+++..+++++|+.++++|||+|||||.++ ++|+++++++|+|+++++||+++|||+||+|||+||+|+|+++
T Consensus 3 ~~m~~~eii~~le~~~P~~~ae~wDn~GL~vG~~~--~~V~~Vl~alD~t~~Vv~eAi~~~adlIItHHPlif~~~k~i~ 80 (370)
T 2nyd_A 3 DPMKIADLMTLLDHHVPFSTAESWDNVGLLIGDED--VEVTGVLTALDCTLEVVNEAIEKGYNTIISHHPLIFKGVTSLK 80 (370)
T ss_dssp CCCBHHHHHHHHHHHSCGGGSCTTCCCEEEESCTT--SBCCCEEEESSCCHHHHHHHHHHTCCEEEESSCSSCSCCSCCC
T ss_pred CCcCHHHHHHHHHHhCCHhHcCCCCcCeEEeCCCc--CccCEEEEEEcCCHHHHHHHHHCCCCEEEECCCcccCCccccC
Confidence 34678899999999999999999999999997665 7899999999999999999999999999999999999999999
Q ss_pred cCChhhHHHHHHHhcCceEEeccccccccCCCccccCCCcCCCC
Q psy14815 433 NDKWKERVVSTCLAHNIAVYSPHTTWDAIQEGRTKKAPPEVQVP 476 (479)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~h~~~d~~~~g~~~~~~~~~~~~ 476 (479)
.+++ +|++.+||+|||+|||+|||||++++||||+||++|||.
T Consensus 81 ~~~~-~r~i~~li~~~Ialya~HTnlD~~~~GvNd~LA~~Lgl~ 123 (370)
T 2nyd_A 81 ANGY-GLIIRKLIQHDINLIAMHTNLDVNPYGVNMMLAKVMGLK 123 (370)
T ss_dssp SSTH-HHHHHHHHHTTCEEEECCHHHHTSTTSHHHHHHHHTTCE
T ss_pred cCCH-HHHHHHHHHCCCeEEEeechhhccCCcHHHHHHHHcCCC
Confidence 9999 999999999999999999999999999999999999975
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=270.98 Aligned_cols=262 Identities=22% Similarity=0.323 Sum_probs=211.3
Q ss_pred ccccccccccceEEEEECC-CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 3 NSQTLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
...++.+|.+.|++++|+| ++++|++|+.||+|++||+.++....... .
T Consensus 73 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~------------------------------~ 122 (402)
T 2aq5_A 73 NVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLR------------------------------E 122 (402)
T ss_dssp TCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBC------------------------------S
T ss_pred CCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccC------------------------------C
Confidence 3557889999999999999 99999999999999999998764332110 0
Q ss_pred eEEeccccCCcEEEEEECCCC-CEEEEEECCCeEEEEECCCCeEEEeEEE--eCCCCcEEEEEEcCCCCEEEEEeCCCcE
Q psy14815 82 KAILSDGHQRTIRETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATL--EGHENEVKSVTWSKNGQFLATCSRDKSV 158 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~v~~l~~~~~~~~l~~~~~dg~i 158 (479)
......+|...|.+++|+|++ .+|++++.||.|++||+++++ ....+ ..|...|.+++|+|++++|++++.||.|
T Consensus 123 ~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 200 (402)
T 2aq5_A 123 PVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA--AVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRV 200 (402)
T ss_dssp CSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE--EEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEE
T ss_pred ceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC--ccEEEecCCCCCceEEEEECCCCCEEEEEecCCcE
Confidence 111235799999999999998 699999999999999999986 56677 7899999999999999999999999999
Q ss_pred EEEEeCCCCceeeeeee-eccccc-eeEEEEecCCCEEEEE---EcCCcEEEEecCCcccceEeeeeecCCCccEEEEEE
Q psy14815 159 WVWEVGEEDEYECAAVI-NAHIQD-VKKVRFHPFDNILASA---SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF 233 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~-~~~~~~-v~~l~~~~~~~~l~~~---~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~ 233 (479)
++||++++ .....+ ..|... +.++.|+|++++|++| +.|+.|++||+++..... ......|...+.+++|
T Consensus 201 ~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~--~~~~~~~~~~v~~~~~ 275 (402)
T 2aq5_A 201 RVIEPRKG---TVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPL--SLQELDTSSGVLLPFF 275 (402)
T ss_dssp EEEETTTT---EEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCS--EEEECCCCSSCEEEEE
T ss_pred EEEeCCCC---ceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCc--eEEeccCCCceeEEEE
Confidence 99999987 455555 567665 8999999999999999 789999999998765311 1122356778999999
Q ss_pred ccCCCEEEE-eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 234 DRIGSRLAT-CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 234 ~~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
+|++++|++ ++.||.|++||+...... ...+..+. +..+|.+++|+|++.++++ .++.+++|++
T Consensus 276 s~~~~~l~~~g~~dg~i~i~d~~~~~~~-----------~~~l~~~~--~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l 340 (402)
T 2aq5_A 276 DPDTNIVYLCGKGDSSIRYFEITSEAPF-----------LHYLSMFS--SKESQRGMGYMPKRGLEVN--KCEIARFYKL 340 (402)
T ss_dssp ETTTTEEEEEETTCSCEEEEEECSSTTC-----------EEEEEEEC--CSSCCSEEEECCGGGSCGG--GTEEEEEEEE
T ss_pred cCCCCEEEEEEcCCCeEEEEEecCCCcc-----------eEeecccc--cCCcccceEEeccccccee--cceeEEEEEc
Confidence 999999964 557999999999654321 12233333 3678999999999998875 5679999999
Q ss_pred CCCC
Q psy14815 313 NPEA 316 (479)
Q Consensus 313 ~~~~ 316 (479)
.++.
T Consensus 341 ~~~~ 344 (402)
T 2aq5_A 341 HERK 344 (402)
T ss_dssp ETTE
T ss_pred CCCc
Confidence 8764
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=269.51 Aligned_cols=277 Identities=20% Similarity=0.300 Sum_probs=225.8
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC------------CccceEEEeecCCcEEEe
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL------------PVETSLRQLVEDKNIRLW 70 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~------------~~~~~~~~~~~~~~i~~w 70 (479)
+++++.+|.+.|++++|+|++ +|++|+.||+|++||+.+++.+..+..+ +.+..+++++.|+.+++|
T Consensus 154 ~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vw 232 (464)
T 3v7d_B 154 FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVW 232 (464)
T ss_dssp EEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEE
T ss_pred EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEe
Confidence 456788999999999999988 9999999999999999999887777654 234678888999999999
Q ss_pred cCCCCCCceee------------------eEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC
Q psy14815 71 GKESFGNKFTA------------------KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG 132 (479)
Q Consensus 71 ~~~~~~~~~~~------------------~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~ 132 (479)
|+......... ......+|...+.++ +++++++++|+.||.|++||+.+++ .+..+.+
T Consensus 233 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~--~~~~~~~ 308 (464)
T 3v7d_B 233 KLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMK--CLYILSG 308 (464)
T ss_dssp ECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTE--EEEEECC
T ss_pred eCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCc--EEEEecC
Confidence 99864322110 122346788889887 5678999999999999999999986 6778889
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcc
Q psy14815 133 HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 212 (479)
Q Consensus 133 ~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~ 212 (479)
|...|.+++|+|+++++++|+.||.|++||++++ +.+..+.+|...|.+++|+ +++|++++.||.|++||+++..
T Consensus 309 ~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~---~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~ 383 (464)
T 3v7d_B 309 HTDRIYSTIYDHERKRCISASMDTTIRIWDLENG---ELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYS 383 (464)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC---cEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCc
Confidence 9999999999999999999999999999999987 6677888999999999998 5899999999999999999765
Q ss_pred cceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec
Q psy14815 213 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 292 (479)
Q Consensus 213 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 292 (479)
. .... .+...+..++|+++++++++++ ||.|++||+..+ +++......+...|.+++|+
T Consensus 384 ~----~~~~-~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g---------------~~~~~~~~~~~~~v~~v~~~ 442 (464)
T 3v7d_B 384 R----KFSY-HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSG---------------KLVHANILKDADQIWSVNFK 442 (464)
T ss_dssp E----EEEE-ECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTC---------------CEEESCTTTTCSEEEEEEEE
T ss_pred e----eeee-cCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCC---------------cEEehhhccCCCcEEEEEec
Confidence 3 2222 3566778889999999999998 899999998554 44454333347899999997
Q ss_pred CCCCeEEEEeCCCeEEEcc
Q psy14815 293 HLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 293 ~~~~~l~~~~~dg~i~vw~ 311 (479)
+..++++++.||.+.+|-
T Consensus 443 -~~~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 443 -GKTLVAAVEKDGQSFLEI 460 (464)
T ss_dssp -TTEEEEEEEETTEEEEEE
T ss_pred -CCEEEEEEEeCCeEEEEE
Confidence 445566666777666553
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-34 Score=281.32 Aligned_cols=289 Identities=9% Similarity=0.074 Sum_probs=205.7
Q ss_pred EEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCC------CCEEEEEECCCeEEEEECCCCeEE------
Q psy14815 58 LRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC------GNFIASASFDATTAVWDKRSGQFE------ 125 (479)
Q Consensus 58 ~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~------~~~l~t~~~dg~i~iwd~~~~~~~------ 125 (479)
+++++.|++|++|++........ ......+|...|.+++|+|+ +.+||+++.||+|++||+.++...
T Consensus 176 laS~s~D~tI~iWd~~~~~~~~~-~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~ 254 (524)
T 2j04_B 176 FDKEKHSSCIQIFKMNTSTLHCV-KVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKM 254 (524)
T ss_dssp ------CEEEEEEEEETTTCCEE-EEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEEC
T ss_pred hccCCCCceEEEEEccCCCCCce-EEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccccee
Confidence 44456788999999875332211 11223467789999999996 579999999999999999876311
Q ss_pred ---EeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEE--EEecCC-CEEEEEEc
Q psy14815 126 ---CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKV--RFHPFD-NILASASY 199 (479)
Q Consensus 126 ---~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l--~~~~~~-~~l~~~~~ 199 (479)
+...+.+|...|++++|+++ ..|++|+.||+|++||++++. .....+..|...|+++ .|+|++ ++|++|+.
T Consensus 255 ~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~--~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~ 331 (524)
T 2j04_B 255 CEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPE--VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV 331 (524)
T ss_dssp CCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCS--SCSEEEECSSSCEEEEEEECCTTSCCEEEEEET
T ss_pred ecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCC--CceEEeecccccEEEEEEEcCCCCCeEEEEecc
Confidence 23467889999999999986 489999999999999998753 2344578899999999 578887 89999999
Q ss_pred CCcEEEEecCCcccceEeeeeecCCC--ccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEE
Q psy14815 200 DDTVKLFKEDKAEADWINFATLKSHT--STVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT 277 (479)
Q Consensus 200 dg~i~i~d~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 277 (479)
|++|++||+++++. ...+.+|. ..|.+++|+|+++.+++++.|++|++||++... ++.+
T Consensus 332 D~tvklWD~~~~~~----~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~---------------~~~~ 392 (524)
T 2j04_B 332 DGYFYIFNPKDIAT----TKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAF---------------AVHP 392 (524)
T ss_dssp TSEEEEECGGGHHH----HCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTT---------------CCEE
T ss_pred CCeEEEEECCCCCc----ccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccc---------------ccee
Confidence 99999999987653 33344444 357899999999999999999999999986543 2356
Q ss_pred EeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccc----cccccceeEEEecCCCCCCCcc
Q psy14815 278 LSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH----RAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 278 ~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
+.+| ...|++++|+|++++|++|+.||+|++||+..+. +.... ..+...+.+++|+|++..+...
T Consensus 393 l~gH-~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~----------~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~ 461 (524)
T 2j04_B 393 LVSR-ETTITAIGVSRLHPMVLAGSADGSLIITNAARRL----------LHGIKNSSATQKSLRLWKWDYSIKDDKYRID 461 (524)
T ss_dssp EEEC-SSCEEEEECCSSCCBCEEEETTTEEECCBSCSST----------TTCC------CCCCEEEECBCCSSSCEEEEC
T ss_pred eecC-CCceEEEEeCCCCCeEEEEECCCEEEEEechHhh----------ccccccCccceeeeEEEEeccCCCCCeEEcc
Confidence 6676 8899999999999999999999999999986542 11100 0112257789999998744221
Q ss_pred c---cc----HHHHHHHHHHhCCCccCCCCCcce
Q psy14815 354 N---LT----LHDVVRRLEAMAPLSLAEPWDNVG 380 (479)
Q Consensus 354 ~---~~----~~~~~~~l~~~~p~~~a~~wd~~G 380 (479)
. +. .......+........+-.|++.|
T Consensus 462 ~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~ 495 (524)
T 2j04_B 462 SSYEVYPLTVNDVSKAKIDAHGINITCTKWNETS 495 (524)
T ss_dssp CCCCCCC-------------CCCSCCCEEECCST
T ss_pred CCceecccccCCcceeeecCCCceEEEEECCCCC
Confidence 1 11 012333344433444555787764
|
| >2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=262.15 Aligned_cols=121 Identities=30% Similarity=0.518 Sum_probs=115.9
Q ss_pred cccHHHHHHHHHHhCCCccCCCCCcceeeeccCCCcCcccEEEEEecCCHHHHHHHHHcCCCEEEEeCCCCcccccccCc
Q psy14815 354 NLTLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIAYHPPIFAPLKRVTN 433 (479)
Q Consensus 354 ~~~~~~~~~~l~~~~p~~~a~~wd~~Gl~v~~~~~~~~v~~il~~~d~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~ 433 (479)
+|+..+++..+++++|..++++|||+|||+|.++ ++|++|++++|+|++++++|+++|||+||+|||+||+|+++++.
T Consensus 2 ~M~~~ei~~~le~~~p~~~a~~~D~~GL~vG~~~--~~V~~I~~alD~t~~vi~eAi~~gadlIitHHP~~f~~~~~~~~ 79 (267)
T 2fyw_A 2 AMLASEVIQAYEAFCPQEFSMEGDSRGLQIGTLD--KGIQRVMVALDIREETVAEAIEKGVDLIIVKHAPIFRPIKDLLA 79 (267)
T ss_dssp CCBHHHHHHHHHHHSCGGGSCTTCCCEEEESCSS--SBCSEEEEESCCCHHHHHHHHHTTCSEEEESSCSCCSCCCCCCT
T ss_pred CccHHHHHHHHHHhCCHhHcCCCCCCeeEeCCCc--CccCEEEEEEcCCHHHHHHHHHCCCCEEEECCccccCCcccccc
Confidence 3567899999999999999999999999997654 89999999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHhcCceEEeccccccccCCCccccCCCcCCCC
Q psy14815 434 DKWKERVVSTCLAHNIAVYSPHTTWDAIQEGRTKKAPPEVQVP 476 (479)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~h~~~d~~~~g~~~~~~~~~~~~ 476 (479)
+++++|++.+|++|||+|||+|||||++++|+|++||++||+.
T Consensus 80 ~~~~~~~i~~li~~~I~lya~Ht~lD~~~~G~n~~La~~Lgl~ 122 (267)
T 2fyw_A 80 SRPQNQIYIDLIKHDIAVYVSHTNIDIVENGLNDWFCQMLGIE 122 (267)
T ss_dssp TSHHHHHHHHHHHTTCEEEECSHHHHHSTTSHHHHHHHHHTCE
T ss_pred CchHHHHHHHHHHCCCeEEEeeccccccCCCHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999985
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=259.89 Aligned_cols=293 Identities=14% Similarity=0.137 Sum_probs=205.6
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC--------CCccceE-EEeecCCcEEEecCC
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG--------LPVETSL-RQLVEDKNIRLWGKE 73 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~--------~~~~~~~-~~~~~~~~i~~w~~~ 73 (479)
++.++++|.+.|++++|+|||++|++|+.++ ++|||+.+++....... ......+ ++++.++++++||..
T Consensus 11 ~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~ 89 (355)
T 3vu4_A 11 PIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDV 89 (355)
T ss_dssp --------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETT
T ss_pred CccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECC
Confidence 3456689999999999999999999998775 78999887665443221 1223334 456677899999987
Q ss_pred CCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCC-eEEEeEEEeCCCCcEEEEEEcCCCCEEEE-
Q psy14815 74 SFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG-QFECNATLEGHENEVKSVTWSKNGQFLAT- 151 (479)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~~- 151 (479)
.... .....+...|.+++|+++. ++++ .|+.|++||+.++ + .+..+.. +...+++++ .++++
T Consensus 90 ~~~~------~~~~~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~--~~~~~~~---~~~~~~~s~--~~la~~ 153 (355)
T 3vu4_A 90 KKQD------VSRIKVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWK--RITDDIR---FGGVCEFSN--GLLVYS 153 (355)
T ss_dssp TTEE------EEEEECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCC--BSSCCEE---EEEEEEEET--TEEEEE
T ss_pred CCcE------EEEEECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCce--eeEEecc---CCceEEEEc--cEEEEe
Confidence 4221 1112367799999998764 4444 3789999999887 4 2233332 444566776 56665
Q ss_pred -EeCCCcEEEEEeCCCCce------------ee-eeeeeccccceeEEEEecCCCEEEEEEcCCc-EEEEecCCcccceE
Q psy14815 152 -CSRDKSVWVWEVGEEDEY------------EC-AAVINAHIQDVKKVRFHPFDNILASASYDDT-VKLFKEDKAEADWI 216 (479)
Q Consensus 152 -~~~dg~i~vwd~~~~~~~------------~~-~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~~ 216 (479)
|+.||.|++||+++.... .+ ...+.+|..+|++++|+|++++|++|+.|++ |++||+++++.
T Consensus 154 sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~--- 230 (355)
T 3vu4_A 154 NEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVL--- 230 (355)
T ss_dssp ESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCE---
T ss_pred CCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcE---
Confidence 688999999999875310 11 5678899999999999999999999999998 99999997664
Q ss_pred eeeeec-C-CCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCC------CCCCCce-EEEEEEeccccccEE
Q psy14815 217 NFATLK-S-HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPT------PDNDSVW-KCVCTLSGHHGRTIY 287 (479)
Q Consensus 217 ~~~~~~-~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~i~ 287 (479)
+..+. + |...|.+++|+|++++|++++.|++|++||+........... ......+ .....+......+..
T Consensus 231 -~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (355)
T 3vu4_A 231 -VREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGC 309 (355)
T ss_dssp -EEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCC
T ss_pred -EEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCce
Confidence 56666 4 999999999999999999999999999999976532211000 0000011 011122222233457
Q ss_pred EEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 288 DISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 288 ~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
.++|+++++++++++.||.+++|++..++
T Consensus 310 ~~a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 310 KIAWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp EEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred EEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 79999999999999999999999987654
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-32 Score=262.02 Aligned_cols=261 Identities=19% Similarity=0.294 Sum_probs=216.1
Q ss_pred cceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCC
Q psy14815 55 ETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHE 134 (479)
Q Consensus 55 ~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~ 134 (479)
+..+++++.++.+++|+...... .......|...|.+++|+|++++|++|+.||.|++||+.+++ ....+.+|.
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~----~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~ 176 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSV----SALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQT--KLRTMAGHQ 176 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCE----EEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--EEEEECCCS
T ss_pred CCCEEEEECCCeEEEeeCCCCcE----eEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCe--EEEEecCCC
Confidence 35678888999999999985321 222234588999999999999999999999999999999886 667888999
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccc
Q psy14815 135 NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEAD 214 (479)
Q Consensus 135 ~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 214 (479)
..|.+++| +++.+++|+.||.|++||++... .....+..|...|.+++|+|++++|++|+.||.|++||++++..
T Consensus 177 ~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~- 251 (401)
T 4aez_A 177 ARVGCLSW--NRHVLSSGSRSGAIHHHDVRIAN--HQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIP- 251 (401)
T ss_dssp SCEEEEEE--ETTEEEEEETTSEEEEEETTSSS--CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSE-
T ss_pred CceEEEEE--CCCEEEEEcCCCCEEEEecccCc--ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCc-
Confidence 99999999 46799999999999999998543 45667888999999999999999999999999999999997653
Q ss_pred eEeeeeecCCCccEEEEEEccCCC-EEEEee--CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEe
Q psy14815 215 WINFATLKSHTSTVWSLAFDRIGS-RLATCS--DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW 291 (479)
Q Consensus 215 ~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 291 (479)
...+..|...|.+++|+|++. .+++++ .|+.|++||+... +++..+.. ...|.+++|
T Consensus 252 ---~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~---------------~~~~~~~~--~~~v~~~~~ 311 (401)
T 4aez_A 252 ---KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG---------------ARVNTVDA--GSQVTSLIW 311 (401)
T ss_dssp ---EEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC---------------CEEEEEEC--SSCEEEEEE
T ss_pred ---cEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC---------------CEEEEEeC--CCcEEEEEE
Confidence 667788999999999999775 455554 7999999998543 34555543 568999999
Q ss_pred cCCCCeEEEE--eCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 292 CHLTDLIATA--CGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 292 ~~~~~~l~~~--~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+|++++++++ +.||.|++|++.+++ . .......+|...|.+++|+|++++|+.+.
T Consensus 312 s~~~~~l~~~~g~~dg~i~v~~~~~~~-------~-~~~~~~~~h~~~v~~~~~s~dg~~l~s~~ 368 (401)
T 4aez_A 312 SPHSKEIMSTHGFPDNNLSIWSYSSSG-------L-TKQVDIPAHDTRVLYSALSPDGRILSTAA 368 (401)
T ss_dssp CSSSSEEEEEECTTTCEEEEEEEETTE-------E-EEEEEEECCSSCCCEEEECTTSSEEEEEC
T ss_pred CCCCCeEEEEeecCCCcEEEEecCCcc-------c-eeEEEecCCCCCEEEEEECCCCCEEEEEe
Confidence 9999999995 489999999998864 0 11222458999999999999999987654
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-33 Score=266.62 Aligned_cols=265 Identities=13% Similarity=0.164 Sum_probs=212.9
Q ss_pred ceEEEeecCCcEEEecCCCCCCcee-eeEEeccccCCcEEEEEECCC----C---CEEEEEECCCeEEEEECCCCeE---
Q psy14815 56 TSLRQLVEDKNIRLWGKESFGNKFT-AKAILSDGHQRTIRETAWSPC----G---NFIASASFDATTAVWDKRSGQF--- 124 (479)
Q Consensus 56 ~~~~~~~~~~~i~~w~~~~~~~~~~-~~~~~~~~~~~~v~~v~~~~~----~---~~l~t~~~dg~i~iwd~~~~~~--- 124 (479)
..+++++.|+.+++|++........ .......+|...|.+++|+|+ + .+|++++.||.|++||+.+++.
T Consensus 27 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~ 106 (397)
T 1sq9_A 27 SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKK 106 (397)
T ss_dssp SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCC
T ss_pred CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccccc
Confidence 6788999999999999986431110 112223589999999999999 9 9999999999999999987751
Q ss_pred EEeEEEeCC-----CCcEEEEEEc----CCCCE-EEEEeCCCcEEEEEeCC------CCcee--eeeee-------eccc
Q psy14815 125 ECNATLEGH-----ENEVKSVTWS----KNGQF-LATCSRDKSVWVWEVGE------EDEYE--CAAVI-------NAHI 179 (479)
Q Consensus 125 ~~~~~~~~~-----~~~v~~l~~~----~~~~~-l~~~~~dg~i~vwd~~~------~~~~~--~~~~~-------~~~~ 179 (479)
.....+..| ...|.+++|+ |++++ |++++.||.|++||++. .+... ....+ ..|.
T Consensus 107 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (397)
T 1sq9_A 107 VIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPS 186 (397)
T ss_dssp EEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSC
T ss_pred ccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCC
Confidence 115677778 5899999999 99999 99999999999999988 43222 11144 4478
Q ss_pred cceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC---C---CccEEEEEEccCCCEEEEeeCC---CeEE
Q psy14815 180 QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS---H---TSTVWSLAFDRIGSRLATCSDD---ATVK 250 (479)
Q Consensus 180 ~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~l~s~~~d---g~i~ 250 (479)
..+++++|+|++ ++++++.||.|++||++++. .+..+.. | ...|.+++|+|++++|++++.| +.|+
T Consensus 187 ~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~ 261 (397)
T 1sq9_A 187 QFATSVDISERG-LIATGFNNGTVQISELSTLR----PLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCIT 261 (397)
T ss_dssp CCCCEEEECTTS-EEEEECTTSEEEEEETTTTE----EEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEE
T ss_pred CCceEEEECCCc-eEEEEeCCCcEEEEECCCCc----eeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEE
Confidence 899999999999 99999999999999998754 3666777 8 9999999999999999999999 9999
Q ss_pred EEeccCCCCCCCCCCCCCCCceEEEEEEec-------------cccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCC
Q psy14815 251 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-------------HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAG 317 (479)
Q Consensus 251 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~ 317 (479)
+||++.. +++..+.+ | ...|.+++|+|++++|++++.||.|++||+.+++
T Consensus 262 i~d~~~~---------------~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~- 324 (397)
T 1sq9_A 262 LYETEFG---------------ERIGSLSVPTHSSQASLGEFAH-SSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE- 324 (397)
T ss_dssp EEETTTC---------------CEEEEECBC--------CCBSB-SSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE-
T ss_pred EEECCCC---------------cccceeccCccccccccccccc-CCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCc-
Confidence 9998543 44566666 5 7899999999999999999999999999998876
Q ss_pred CCCceeeEEEecccc------cc---------------ccceeEEEecCCCCCCC
Q psy14815 318 DSDMVSFDLVHTEHR------AH---------------NQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 318 ~~~~~~~~~~~~~~~------~h---------------~~~v~~~~~sp~~~~l~ 351 (479)
++.. .. +| ..+|++++|+|++++++
T Consensus 325 --------~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~ 370 (397)
T 1sq9_A 325 --------RITT-LNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSG 370 (397)
T ss_dssp --------EEEE-EECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBS
T ss_pred --------eeEE-EecccCcccchhhhhccccccccccCCceeEEEecccccccc
Confidence 2322 23 55 89999999999995433
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-32 Score=249.67 Aligned_cols=249 Identities=19% Similarity=0.334 Sum_probs=207.1
Q ss_pred cccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 6 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 6 ~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
.+.+|...|++++|+|++++|++|+.||+|++||+++++.+..+
T Consensus 62 ~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~------------------------------------ 105 (318)
T 4ggc_A 62 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM------------------------------------ 105 (318)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE------------------------------------
T ss_pred EecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe------------------------------------
Confidence 34578899999999999999999999999999999887765443
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCC
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~ 165 (479)
.+|...+.++.+ ++..+++++.++.+++|+..... .....+.+|...+.++.++++++++++++.||.|++||+++
T Consensus 106 -~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 106 -TSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAE-HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp -ECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS-CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred -cCccceEEEeec--CCCEEEEEecCCceEeeecCCCc-eeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCC
Confidence 467777776655 56799999999999999998765 35677889999999999999999999999999999999987
Q ss_pred CCce-eeeeeeeccccceeEEEEecCCCEE---EEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE
Q psy14815 166 EDEY-ECAAVINAHIQDVKKVRFHPFDNIL---ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 166 ~~~~-~~~~~~~~~~~~v~~l~~~~~~~~l---~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 241 (479)
++.. ........+...|.++.++|++..+ ++++.++.|++||.+.... .....+...+..+.|+++++.++
T Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~ 256 (318)
T 4ggc_A 182 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC-----LSAVDAHSQVCSILWSPHYKELI 256 (318)
T ss_dssp BTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE-----EEEEECSSCEEEEEEETTTTEEE
T ss_pred CcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc-----cccccceeeeeeeeecccccceE
Confidence 6422 2344556678889999999976433 3566789999999987653 23345677899999999999887
Q ss_pred Eee--CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCC
Q psy14815 242 TCS--DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 242 s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
+++ .|+.|++||++. ++++.++.+| ...|++++|+|++++|++|+.||+|+|||+...
T Consensus 257 ~~sg~~d~~i~iwd~~~---------------~~~~~~l~gH-~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 257 SGHGFAQNQLVIWKYPT---------------MAKVAELKGH-TSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEECTTTCCEEEEETTT---------------CCEEEEECCC-SSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred EEEEcCCCEEEEEECCC---------------CcEEEEEcCC-CCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 655 799999999843 3667889997 889999999999999999999999999998754
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-33 Score=268.94 Aligned_cols=269 Identities=13% Similarity=0.121 Sum_probs=201.7
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEecc---cccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMV---IREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
+|.+.|++++|+|++++|++|+.||+|++||++ +++....+..+ .+ ....
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~-------------~i--------------~~~~ 161 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCE-------------CI--------------RKIN 161 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEE-------------EE--------------EEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccc-------------ee--------------EEEE
Confidence 699999999999999999999999999999985 44333222100 01 1111
Q ss_pred ccc--cCCcEEEEE--ECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC--CCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy14815 86 SDG--HQRTIRETA--WSPCGNFIASASFDATTAVWDKRSGQFECNATLEG--HENEVKSVTWSKNGQFLATCSRDKSVW 159 (479)
Q Consensus 86 ~~~--~~~~v~~v~--~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~l~~~~~dg~i~ 159 (479)
... +...+.++. +++++.++++|+.|+.|++||+++++ ....+.. |...|.+++|+|++++|++|+.||.|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~ 239 (437)
T 3gre_A 162 LKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLE--RLQIIENSPRHGAVSSICIDEECCVLILGTTRGIID 239 (437)
T ss_dssp GGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCC--EEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEE
T ss_pred ccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe--eeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEE
Confidence 112 677888888 66899999999999999999999987 5666776 889999999999999999999999999
Q ss_pred EEEeCCCCceeeeeeee-ccccceeEEEEec----CCCEEEEEEcCCcEEEEecCCcccceEeee---------------
Q psy14815 160 VWEVGEEDEYECAAVIN-AHIQDVKKVRFHP----FDNILASASYDDTVKLFKEDKAEADWINFA--------------- 219 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~-~~~~~v~~l~~~~----~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--------------- 219 (479)
+||++.. ..+..+. .|..+|++++|+| ++.+|++|+.||.|++||++++........
T Consensus 240 iwd~~~~---~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (437)
T 3gre_A 240 IWDIRFN---VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEK 316 (437)
T ss_dssp EEETTTT---EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCS
T ss_pred EEEcCCc---cEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceeccccc
Confidence 9999986 5555554 6778999996654 678999999999999999987653111100
Q ss_pred -----eecC--CCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCC-Cc--------------------
Q psy14815 220 -----TLKS--HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND-SV-------------------- 271 (479)
Q Consensus 220 -----~~~~--~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~-------------------- 271 (479)
.+.+ |...|++++|+ ++++|++|+.|+.|++||+..+.....+...... ..
T Consensus 317 ~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (437)
T 3gre_A 317 GLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRT 395 (437)
T ss_dssp SGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC--
T ss_pred ccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccc
Confidence 1122 77789999999 7789999999999999999776544332221100 00
Q ss_pred -eEEEEEEeccccccEEEEEecCC--CCeEEEEeCCCeEEEcc
Q psy14815 272 -WKCVCTLSGHHGRTIYDISWCHL--TDLIATACGDDAIRIFK 311 (479)
Q Consensus 272 -~~~~~~~~~~~~~~i~~l~~~~~--~~~l~~~~~dg~i~vw~ 311 (479)
.........| ...|++++|+++ +.+|++|+.||.|+||+
T Consensus 396 ~~~~~~~~~~h-~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 396 STHSVDDSLYH-HDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp ------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cccccCccccc-ccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 0011112224 789999999998 77999999999999995
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-32 Score=255.90 Aligned_cols=270 Identities=13% Similarity=0.067 Sum_probs=201.2
Q ss_pred ECCCCCeEEEeeCCCcEEEEecccccccccccCC-----CccceEEEeecCCcEEEecCCCCC-----CceeeeEEeccc
Q psy14815 19 WNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL-----PVETSLRQLVEDKNIRLWGKESFG-----NKFTAKAILSDG 88 (479)
Q Consensus 19 ~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~w~~~~~~-----~~~~~~~~~~~~ 88 (479)
+.+++++|++|+.||+|++||+.+++.+..+... ...+.+++++.|+++++|+..... ...........+
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~ 123 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPAIISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVD 123 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCSEEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECC
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCceEEecCCCeEEEEEccCceEEeecCCcceeEEeecC
Confidence 3457889999999999999999988766544311 111228899999999999876311 011112223346
Q ss_pred cCCcEEEEEECC--CCCEEEEEECCCeEEEEECCCCeEEEeEEE-eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCC
Q psy14815 89 HQRTIRETAWSP--CGNFIASASFDATTAVWDKRSGQFECNATL-EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 89 ~~~~v~~v~~~~--~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~ 165 (479)
|...|.+++|+| +++++++++.||+|++||+++++. .... ..+...+.+++|+|++.+|++|+.||.|++||+++
T Consensus 124 ~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~--~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~ 201 (343)
T 3lrv_A 124 SANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ--YIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSS 201 (343)
T ss_dssp CSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE--EEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSC
T ss_pred CCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE--EEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 778999999999 999999999999999999999873 3333 34556899999999999999999999999999998
Q ss_pred CCceeeeeeeec-cccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEE--EEEEccCCCEEEE
Q psy14815 166 EDEYECAAVINA-HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW--SLAFDRIGSRLAT 242 (479)
Q Consensus 166 ~~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~l~s 242 (479)
++.. ...+.. |..+|++++|+|++.+|++++ ++.|++||+++.... ..+..+..|...+. +++|+|++++|++
T Consensus 202 ~~~~--~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 277 (343)
T 3lrv_A 202 PDQA--SSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGT-LAYPTYTIPEFKTGTVTYDIDDSGKNMIA 277 (343)
T ss_dssp TTSC--CEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTC-BSSCCCBC-----CCEEEEECTTSSEEEE
T ss_pred CCCC--ccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcc-eeecccccccccccceEEEECCCCCEEEE
Confidence 7422 145566 999999999999999999999 559999999987641 11222222334443 6999999999999
Q ss_pred eeC-CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC---CCCeEEEEeCCCeEEEcccCC
Q psy14815 243 CSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH---LTDLIATACGDDAIRIFKENP 314 (479)
Q Consensus 243 ~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~---~~~~l~~~~~dg~i~vw~~~~ 314 (479)
++. |+.|++|++..... .|.. .++..++|.+ +.+.+++++.||.+.++-...
T Consensus 278 ~s~~d~~i~v~~~~~~~~-----------~~~~---------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~ 333 (343)
T 3lrv_A 278 YSNESNSLTIYKFDKKTK-----------NWTK---------DEESALCLQSDTADFTDMDVVCGDGGIAAILKTN 333 (343)
T ss_dssp EETTTTEEEEEEECTTTC-----------SEEE---------EEEEECCC----CCCCEEEEEEETTEEEEEEECS
T ss_pred ecCCCCcEEEEEEccccc-----------ceEe---------cCceeEecCccccccceeEEEecCCceEEEEecC
Confidence 998 99999999855432 1221 4677888988 888999999999999885443
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-31 Score=251.98 Aligned_cols=254 Identities=23% Similarity=0.386 Sum_probs=204.6
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCe--EEEeEEEeCCCCcEEEEEEcC--CCCEEEEEeCCCcEEEE
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ--FECNATLEGHENEVKSVTWSK--NGQFLATCSRDKSVWVW 161 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~v~~l~~~~--~~~~l~~~~~dg~i~vw 161 (479)
..+|.+.|++++|+|++++|++|+.||.|++||+.++. ......+.+|...|.+++|+| ++++|++++.||.|++|
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 36899999999999999999999999999999998653 245677889999999999999 69999999999999999
Q ss_pred EeCCCCc------eeeeeeeeccccceeEEEEecC--CCEEEEEEcCCcEEEEecCCcccceEe-----e----eeecCC
Q psy14815 162 EVGEEDE------YECAAVINAHIQDVKKVRFHPF--DNILASASYDDTVKLFKEDKAEADWIN-----F----ATLKSH 224 (479)
Q Consensus 162 d~~~~~~------~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~-----~----~~~~~~ 224 (479)
|++.... ......+..|...|.+++|+|+ +++|++++.||.|++||++++...... . .....|
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANH 166 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSC
T ss_pred ecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCc
Confidence 9987532 2446677789999999999999 999999999999999999876531110 0 011257
Q ss_pred CccEEEEEEccC---CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCC----Ce
Q psy14815 225 TSTVWSLAFDRI---GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT----DL 297 (479)
Q Consensus 225 ~~~v~~~~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~----~~ 297 (479)
...+.+++|+|+ +.++++++.|+.+.+|+.... ....+..+.+| ...|++++|+|++ ++
T Consensus 167 ~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~h-~~~i~~~~~~p~~~~~~~~ 232 (351)
T 3f3f_A 167 LQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDG-------------KLHVAAKLPGH-KSLIRSISWAPSIGRWYQL 232 (351)
T ss_dssp SCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTS-------------CEEEEEECCCC-CSCEEEEEECCCSSCSSEE
T ss_pred ccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCC-------------ceeeeeecCCC-CcceeEEEECCCCCCcceE
Confidence 889999999997 899999999999977775332 22446677776 8899999999998 89
Q ss_pred EEEEeCCCeEEEcccCCCCCCC-------------------------------------CceeeEEEeccccccccceeE
Q psy14815 298 IATACGDDAIRIFKENPEAGDS-------------------------------------DMVSFDLVHTEHRAHNQDVNC 340 (479)
Q Consensus 298 l~~~~~dg~i~vw~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~h~~~v~~ 340 (479)
|++++.||.|++||+..+.... ......++ ....+|...|++
T Consensus 233 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~h~~~v~~ 311 (351)
T 3f3f_A 233 IATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELL-SEHDDHNGEVWS 311 (351)
T ss_dssp EEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEE-EEECTTSSCEEE
T ss_pred EEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEE-EEEecccccEEE
Confidence 9999999999999998752110 01112233 334689999999
Q ss_pred EEecCCCCCCCccc
Q psy14815 341 VAWNPVVPEPQKTN 354 (479)
Q Consensus 341 ~~~sp~~~~l~~~~ 354 (479)
++|+|++++|+.++
T Consensus 312 ~~~s~~~~~l~s~~ 325 (351)
T 3f3f_A 312 VSWNLTGTILSSAG 325 (351)
T ss_dssp EEECSSSCCEEEEE
T ss_pred EEEcCCCCEEEEec
Confidence 99999999997765
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-32 Score=256.69 Aligned_cols=206 Identities=12% Similarity=0.080 Sum_probs=171.4
Q ss_pred ccccceEEEEECCCCCeEEEe--eCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 9 GHQGRVWNVSWNPQGTMISSC--GEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~--~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
.+...+.+++|||||++++++ +.|++|+|||+++++++..+
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~------------------------------------- 173 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI------------------------------------- 173 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE-------------------------------------
T ss_pred CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe-------------------------------------
Confidence 455678999999999998654 47899999999876654332
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC----cEEEEE
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK----SVWVWE 162 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg----~i~vwd 162 (479)
.|...|.+++|+|+|+++++++. +.+++|+..+++.........|...|.+++|+|+++.+++++.|+ .++.|+
T Consensus 174 -~~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~ 251 (365)
T 4h5i_A 174 -ETRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKIS 251 (365)
T ss_dssp -ECSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEE
T ss_pred -CCCCceEEEEEccCCceEEeccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecc
Confidence 46778999999999999999985 557777777776444455667888999999999999999999887 588899
Q ss_pred eCCCCc-eeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeee-ecCCCccEEEEEEccCCCEE
Q psy14815 163 VGEEDE-YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT-LKSHTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 163 ~~~~~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l 240 (479)
+..... ......+..|..+|++++|+|+|++|++|+.|++|+|||+++++. +.. +.+|...|++++|+|||++|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~----~~~~~~gH~~~V~~v~fSpdg~~l 327 (365)
T 4h5i_A 252 IKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSM----SKIFKQAHSFAITEVTISPDSTYV 327 (365)
T ss_dssp EETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE----EEEETTSSSSCEEEEEECTTSCEE
T ss_pred cccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcE----EEEecCcccCCEEEEEECCCCCEE
Confidence 876532 123456778899999999999999999999999999999997653 555 57899999999999999999
Q ss_pred EEeeCCCeEEEEeccCC
Q psy14815 241 ATCSDDATVKIWKEYKP 257 (479)
Q Consensus 241 ~s~~~dg~i~iwd~~~~ 257 (479)
++|+.|++|+|||+...
T Consensus 328 aS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 328 ASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEETTSEEEEEECCTT
T ss_pred EEEeCCCeEEEEEcCCC
Confidence 99999999999998543
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-31 Score=243.21 Aligned_cols=253 Identities=20% Similarity=0.225 Sum_probs=212.1
Q ss_pred CccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCe-EEEeEEEe
Q psy14815 53 PVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ-FECNATLE 131 (479)
Q Consensus 53 ~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~-~~~~~~~~ 131 (479)
+.+..+++++.|+.+++|++... ........|...|.+++|+|+++++++++.||.|++|++.... ......+.
T Consensus 27 ~~~~~l~s~~~dg~v~vw~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~ 101 (313)
T 3odt_A 27 VDDSKVASVSRDGTVRLWSKDDQ-----WLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLI 101 (313)
T ss_dssp EETTEEEEEETTSEEEEEEESSS-----EEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEEC
T ss_pred cCCCEEEEEEcCCcEEEEECCCC-----EEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchh
Confidence 45667889999999999998631 1222235789999999999999999999999999999987642 12466778
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCC
Q psy14815 132 GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDK 210 (479)
Q Consensus 132 ~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~ 210 (479)
.|...|.++.| +++++++++.||.|++|| .. .....+..|...+.+++|.| +++++++++.||.|++||..
T Consensus 102 ~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~- 173 (313)
T 3odt_A 102 GHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EG---SLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND- 173 (313)
T ss_dssp CCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TT---EEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT-
T ss_pred hcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CC---cEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC-
Confidence 89999999999 577999999999999999 32 55667788999999999998 89999999999999999944
Q ss_pred cccceEeeeeecC-CCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEE
Q psy14815 211 AEADWINFATLKS-HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI 289 (479)
Q Consensus 211 ~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 289 (479)
.....+.. |...+.+++|+|++. +++++.||.|++||++.. +++..+.+| ..+|+++
T Consensus 174 -----~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~---------------~~~~~~~~~-~~~i~~~ 231 (313)
T 3odt_A 174 -----KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTG---------------DVLRTYEGH-ESFVYCI 231 (313)
T ss_dssp -----EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTC---------------CEEEEEECC-SSCEEEE
T ss_pred -----ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCch---------------hhhhhhhcC-CceEEEE
Confidence 23445555 899999999999988 899999999999998543 456777776 7899999
Q ss_pred EecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCC
Q psy14815 290 SWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 290 ~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 351 (479)
+|+|++ .|++++.||.|++||+.+++ .......|..+|.+++|+|++++++
T Consensus 232 ~~~~~~-~l~~~~~dg~v~iwd~~~~~----------~~~~~~~~~~~i~~~~~~~~~~~~~ 282 (313)
T 3odt_A 232 KLLPNG-DIVSCGEDRTVRIWSKENGS----------LKQVITLPAISIWSVDCMSNGDIIV 282 (313)
T ss_dssp EECTTS-CEEEEETTSEEEEECTTTCC----------EEEEEECSSSCEEEEEECTTSCEEE
T ss_pred EEecCC-CEEEEecCCEEEEEECCCCc----------eeEEEeccCceEEEEEEccCCCEEE
Confidence 999999 68899999999999999987 3344467888999999999998653
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-31 Score=250.39 Aligned_cols=246 Identities=15% Similarity=0.170 Sum_probs=198.8
Q ss_pred ccccceEEEEECCC---CCeEEEeeCCCcEEEEeccccc-ccccccCC----------------CccceEEEeecCCcEE
Q psy14815 9 GHQGRVWNVSWNPQ---GTMISSCGEDKNIRLWVMVIRE-PYEKLHGL----------------PVETSLRQLVEDKNIR 68 (479)
Q Consensus 9 ~h~~~V~~l~~s~~---~~~l~t~~~dg~v~iwd~~~~~-~~~~~~~~----------------~~~~~~~~~~~~~~i~ 68 (479)
+|...|++++|+|+ +++|++|+.||.|++||+.+++ .+..+..+ +.+..+++++.++.++
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~ 142 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVK 142 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEE
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEE
Confidence 79999999999998 6999999999999999999887 55555443 3456788889999999
Q ss_pred EecCCCCCCceeeeEEeccccCCcEEEEE----ECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC
Q psy14815 69 LWGKESFGNKFTAKAILSDGHQRTIRETA----WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK 144 (479)
Q Consensus 69 ~w~~~~~~~~~~~~~~~~~~~~~~v~~v~----~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~ 144 (479)
+||+................+...+.+++ |+|+++++++++.||.|++||+++++. .....|...|.+++|+|
T Consensus 143 vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~v~~~~~~~ 219 (357)
T 3i2n_A 143 VWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL---RWETNIKNGVCSLEFDR 219 (357)
T ss_dssp EECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE---EEEEECSSCEEEEEESC
T ss_pred EEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce---eeecCCCCceEEEEcCC
Confidence 99998643222222111122245899998 788999999999999999999999863 33456888999999999
Q ss_pred ---CCCEEEEEeCCCcEEEEEeCCCCceeeee--eeeccccceeEEEEecCCC-EEEEEEcCCcEEEEecCCcccc----
Q psy14815 145 ---NGQFLATCSRDKSVWVWEVGEEDEYECAA--VINAHIQDVKKVRFHPFDN-ILASASYDDTVKLFKEDKAEAD---- 214 (479)
Q Consensus 145 ---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~---- 214 (479)
++.++++++.||.|++||+++........ .+..|...|++++|+|+++ +|++++.||.|++||++.+...
T Consensus 220 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 299 (357)
T 3i2n_A 220 KDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKD 299 (357)
T ss_dssp SSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CC
T ss_pred CCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccccccc
Confidence 99999999999999999998763322221 3348999999999999998 8999999999999999865422
Q ss_pred -----------eEeeeeecCCCccEEEEEEccCCCEEE-EeeCCCeEEEEeccCC
Q psy14815 215 -----------WINFATLKSHTSTVWSLAFDRIGSRLA-TCSDDATVKIWKEYKP 257 (479)
Q Consensus 215 -----------~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~ 257 (479)
...+..+..|...|++++|+|++++|+ +++.||.|++||+...
T Consensus 300 ~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 300 SEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp TTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred CCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 145677888999999999999999998 8999999999998543
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-31 Score=261.57 Aligned_cols=303 Identities=14% Similarity=0.204 Sum_probs=204.5
Q ss_pred ccccccccc------------cceEEEEECCCC--CeEEEeeCCCcEEEEecccccccccccCCCc-cceEEEeecCCcE
Q psy14815 3 NSQTLKGHQ------------GRVWNVSWNPQG--TMISSCGEDKNIRLWVMVIREPYEKLHGLPV-ETSLRQLVEDKNI 67 (479)
Q Consensus 3 ~~~~l~~h~------------~~V~~l~~s~~~--~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~i 67 (479)
+..++++|. +.|++++|+|++ .+|++++.||+|++||+.+++.......... ...+.....-..+
T Consensus 73 ~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 152 (447)
T 3dw8_B 73 VYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTL 152 (447)
T ss_dssp EEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSC
T ss_pred EecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccce
Confidence 366788998 889999999998 7999999999999999987554321111000 0000000000000
Q ss_pred EEecCCC--CCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeE-------EEeCCCCcEE
Q psy14815 68 RLWGKES--FGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNA-------TLEGHENEVK 138 (479)
Q Consensus 68 ~~w~~~~--~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~-------~~~~~~~~v~ 138 (479)
.+-.... .............+|...|.+++|+|++++|++| .|+.|++||+++... ... .+.+|...|.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~v~ 230 (447)
T 3dw8_B 153 RVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDR-SFNIVDIKPANMEELTEVIT 230 (447)
T ss_dssp CCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEE-EEEEEECCCSSGGGCCCCEE
T ss_pred EeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCc-eeeeeecccccccccCcceE
Confidence 0000000 0000111223346899999999999999999998 799999999985431 222 2567999999
Q ss_pred EEEEcCCC-CEEEEEeCCCcEEEEEeCCCCce-eeeeeeecccc------------ceeEEEEecCCCEEEEEEcCCcEE
Q psy14815 139 SVTWSKNG-QFLATCSRDKSVWVWEVGEEDEY-ECAAVINAHIQ------------DVKKVRFHPFDNILASASYDDTVK 204 (479)
Q Consensus 139 ~l~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~-~~~~~~~~~~~------------~v~~l~~~~~~~~l~~~~~dg~i~ 204 (479)
+++|+|++ ++|++|+.||.|++||+++.... .....+..|.. .|++++|+|++++|++++. +.|+
T Consensus 231 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~ 309 (447)
T 3dw8_B 231 AAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVK 309 (447)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEE
T ss_pred EEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEE
Confidence 99999998 99999999999999999987421 11455666665 8999999999999999999 9999
Q ss_pred EEecCC-cccceEeeeeecCCCcc---------------EEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCC
Q psy14815 205 LFKEDK-AEADWINFATLKSHTST---------------VWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDN 268 (479)
Q Consensus 205 i~d~~~-~~~~~~~~~~~~~~~~~---------------v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 268 (479)
+||++. +. ++..+..|... +..++|+|++++|++|+.||.|++||+..............
T Consensus 310 iwd~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~ 385 (447)
T 3dw8_B 310 VWDLNMENR----PVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASREN 385 (447)
T ss_dssp EEETTCCSS----CSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTT
T ss_pred EEeCCCCcc----ccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccc
Confidence 999986 33 35566666532 33489999999999999999999999876532110000000
Q ss_pred -----CCce-----------EEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccC
Q psy14815 269 -----DSVW-----------KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 313 (479)
Q Consensus 269 -----~~~~-----------~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~ 313 (479)
.... .............|..++|+|++.+|++++.++ +++|..+
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 386 NKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp CCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred cccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 0000 000000111245789999999999999998775 7787643
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-32 Score=263.90 Aligned_cols=252 Identities=12% Similarity=0.100 Sum_probs=172.2
Q ss_pred ccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEe---EEEeCCCCcEEEEEEcC--------CCCEEEEEeCCC
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECN---ATLEGHENEVKSVTWSK--------NGQFLATCSRDK 156 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~---~~~~~~~~~v~~l~~~~--------~~~~l~~~~~dg 156 (479)
.|........+++++.++++++.|++|++||.++++.... ..+.+|.+.|.+++|+| |+++|++|+.|+
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 4445555556666788999999999999999998864322 33578999999999997 788999999999
Q ss_pred cEEEEEeCCCCceeeeeeeeccccceeEEEEecCC-CEEEEEEcCCcEEEEecCCcccceEe------------------
Q psy14815 157 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWIN------------------ 217 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~------------------ 217 (479)
+|++||+++. .....+..|..++.+++|+|++ ++|++|+.||+|++||++++......
T Consensus 167 tv~~Wd~~~~---~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~ 243 (393)
T 4gq1_A 167 TLIIWRLTDE---GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLP 243 (393)
T ss_dssp EEEEEEEETT---EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGG
T ss_pred eEEEEECCCC---ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccc
Confidence 9999999877 4555677888999999999987 58999999999999999876532111
Q ss_pred ---eeeecCCCccEEEEEEc-cCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCC----ceEEEEEEeccccccEEEE
Q psy14815 218 ---FATLKSHTSTVWSLAFD-RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDS----VWKCVCTLSGHHGRTIYDI 289 (479)
Q Consensus 218 ---~~~~~~~~~~v~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~l 289 (479)
.....+|...+.++.|+ ++++.|++++.|+++++||+........+....... ..........+ ...+. .
T Consensus 244 ~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~ 321 (393)
T 4gq1_A 244 LVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLF-PSLLG-A 321 (393)
T ss_dssp GC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSS-CCSSC-C
T ss_pred ceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccccccccc-Cccee-E
Confidence 11224677888999986 799999999999999999987654433322111000 00001111111 22233 3
Q ss_pred EecC--CCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 290 SWCH--LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 290 ~~~~--~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.|+| ++.++++|+.||.|++||+.+++ .......|..+|++++|||||++|+.+.
T Consensus 322 ~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~----------~~~~~~~~~~~V~svafspdG~~LA~as 378 (393)
T 4gq1_A 322 CPHPRYMDYFATAHSQHGLIQLINTYEKD----------SNSIPIQLGMPIVDFCWHQDGSHLAIAT 378 (393)
T ss_dssp EECSSCTTEEEEEETTTTEEEEEETTCTT----------CCEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred EEccCCCCEEEEEECCCCEEEEEECCCCc----------EEEEecCCCCcEEEEEEcCCCCEEEEEe
Confidence 3443 34467788899999999999887 2223357888999999999999997764
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-31 Score=276.47 Aligned_cols=248 Identities=23% Similarity=0.352 Sum_probs=209.7
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCcEEEEEe
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~vwd~ 163 (479)
..+|.+.|++++|+|++++|++|+.||.|++||+.++.......+.+|.+.|.+++|+++ +++|++|+.||.|++||+
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~ 84 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 84 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEE
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEEC
Confidence 468999999999999999999999999999999987666678889999999999999987 999999999999999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecC--CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEcc------
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPF--DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR------ 235 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~------ 235 (479)
+++. ......+..|...|++++|+|+ ++.+++|+.||.|++||++.... .....+..|...|.+++|+|
T Consensus 85 ~~~~-~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~--~~~~~~~~~~~~v~~l~~~p~~~~~~ 161 (753)
T 3jro_A 85 ENGR-WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT--TSPIIIDAHAIGVNSASWAPATIEED 161 (753)
T ss_dssp ETTE-EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC--CCCEEEECCSSCEEEEEECCCC----
T ss_pred CCCc-ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC--cceeEeecCCCceEEEEecCcccccc
Confidence 9863 2356677889999999999999 99999999999999999987643 23445678999999999999
Q ss_pred -------CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCC---CCeEEEEeCCC
Q psy14815 236 -------IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL---TDLIATACGDD 305 (479)
Q Consensus 236 -------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~---~~~l~~~~~dg 305 (479)
+++++++|+.||.|++||++... ....+...+.+| ..+|++++|+|+ +++|++++.||
T Consensus 162 ~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~-----------~~~~~~~~~~~h-~~~V~~l~~sp~~~~~~~l~s~s~Dg 229 (753)
T 3jro_A 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDA-----------QTYVLESTLEGH-SDWVRDVAWSPTVLLRSYLASVSQDR 229 (753)
T ss_dssp -----CGGGCCEEEEETTSCEEEEEEETTT-----------TEEEEEEEECCC-SSCEEEEEECCCCSSSEEEEEEESSS
T ss_pred cccccCCCCCEEEEEECCCeEEEEeccCCc-----------ccceeeeeecCC-CCcEEEEEeccCCCCCCEEEEEecCC
Confidence 58999999999999999997643 234566777886 889999999999 89999999999
Q ss_pred eEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 306 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 306 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
.|++||+..++.... ........|...|++++|+|++++++.+
T Consensus 230 ~I~iwd~~~~~~~~~-----~~~~~~~~~~~~v~~l~~spdg~~l~s~ 272 (753)
T 3jro_A 230 TCIIWTQDNEQGPWK-----KTLLKEEKFPDVLWRASWSLSGNVLALS 272 (753)
T ss_dssp CEEEEEESSSSSCCB-----CCBSSSSCCSSCCCCEEECTTTCCEEEE
T ss_pred EEEEecCCCCCCcce-----eEEeccCCCCCceEEEEEcCCCCEEEEE
Confidence 999999988642110 1122234688999999999999988543
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-31 Score=257.84 Aligned_cols=252 Identities=19% Similarity=0.383 Sum_probs=202.2
Q ss_pred eccccCCcEEEEEECCC-CCEEEEEECCCeEEEEECCC--------CeEEEeEEEeCCCCcEEEEEEcCCCC-EEEEEeC
Q psy14815 85 LSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRS--------GQFECNATLEGHENEVKSVTWSKNGQ-FLATCSR 154 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~--------~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~ 154 (479)
....|...|++++|+|+ +.+|++++.||.|++||+.+ ++......+.+|...|.+++|+|++. +|++|+.
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD 202 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence 34679999999999997 68999999999999999976 22346778889999999999999988 9999999
Q ss_pred CCcEEEEEeCCCCc----eeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEE
Q psy14815 155 DKSVWVWEVGEEDE----YECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW 229 (479)
Q Consensus 155 dg~i~vwd~~~~~~----~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~ 229 (479)
||.|++||+..... ......+..|...|.+++|+| ++.+|++++.||.|++||++.... ......+..|...|+
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~-~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT-SKPSHTVDAHTAEVN 281 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS-SSCSEEEECCSSCEE
T ss_pred CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC-CcceeEeecCCCCeE
Confidence 99999999987432 122456678999999999999 678999999999999999997631 123556678999999
Q ss_pred EEEEccCCC-EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC-eEEEEeCCCeE
Q psy14815 230 SLAFDRIGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAI 307 (479)
Q Consensus 230 ~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~~dg~i 307 (479)
+++|+|+++ .+++|+.||.|++||++.... ++..+..| ...|.+++|+|+++ +|++++.||.|
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~--------------~~~~~~~h-~~~v~~i~~sp~~~~~l~s~~~d~~i 346 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKL--------------KLHSFESH-KDEIFQVQWSPHNETILASSGTDRRL 346 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTS--------------CSEEEECC-SSCEEEEEECSSCTTEEEEEETTSCC
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC--------------CeEEeecC-CCCEEEEEECCCCCCEEEEEeCCCcE
Confidence 999999987 688999999999999976432 24566676 78999999999985 69999999999
Q ss_pred EEcccCCCCCCCCc-----eeeEEEeccccccccceeEEEecCCCC-CCCcc
Q psy14815 308 RIFKENPEAGDSDM-----VSFDLVHTEHRAHNQDVNCVAWNPVVP-EPQKT 353 (479)
Q Consensus 308 ~vw~~~~~~~~~~~-----~~~~~~~~~~~~h~~~v~~~~~sp~~~-~l~~~ 353 (479)
++||+......... .... +.....+|...|++++|+|+++ +|+.+
T Consensus 347 ~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~v~~~~~~p~~~~~l~s~ 397 (430)
T 2xyi_A 347 HVWDLSKIGEEQSTEDAEDGPPE-LLFIHGGHTAKISDFSWNPNEPWIICSV 397 (430)
T ss_dssp EEEEGGGTTCCCCHHHHHHCCTT-EEEECCCCSSCEEEEEECSSSTTEEEEE
T ss_pred EEEeCCCCccccCccccccCCcc-eEEEcCCCCCCceEEEECCCCCCEEEEE
Confidence 99999873211000 0001 3334468999999999999999 45433
|
| >2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function; 2.60A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-34 Score=246.72 Aligned_cols=117 Identities=19% Similarity=0.262 Sum_probs=111.0
Q ss_pred ccHHHHHHHHHHhCCCccCC-CCCcceeee-ccCCCcCcccEEEEEecCCHHHHHHHHHcCCCEEEEeCCCCcccccccC
Q psy14815 355 LTLHDVVRRLEAMAPLSLAE-PWDNVGLLI-EPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIAYHPPIFAPLKRVT 432 (479)
Q Consensus 355 ~~~~~~~~~l~~~~p~~~a~-~wd~~Gl~v-~~~~~~~~v~~il~~~d~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~ 432 (479)
|+..+++..+++++|..+++ +|||+|||+ |. ++|+++++++|+|++++++|+++|||+||+|||+|| |++++
T Consensus 1 M~~~ei~~~le~~~p~~~~~~~~d~~GL~veG~----~~V~~I~~alD~t~~vi~eAi~~~adlIitHHp~~f-~~~~~- 74 (242)
T 2yyb_A 1 MDRDELVRYLDAYLRIQDFPQDPSLNGLQVEGK----RTVRKVGAAVDAGEAIFRKALEEEVDFLIVHHGLFW-GKPFP- 74 (242)
T ss_dssp CBHHHHHHHHHHHTTGGGCTTCSSCCEEEECCC----SBCCCEEEEEECSHHHHHHHHHTTCSEEEEEECSCS-SCCCC-
T ss_pred CcHHHHHHHHHHhCCHhhhccCCCCCeEEEcCC----cccCEEEEEEcCCHHHHHHHHHCCCCEEEECCCcCc-Ccccc-
Confidence 35779999999999999999 999999999 43 689999999999999999999999999999999999 99999
Q ss_pred cCChhhHHHHHHHhcCceEEeccccccccCC-CccccCCCcCCCCC
Q psy14815 433 NDKWKERVVSTCLAHNIAVYSPHTTWDAIQE-GRTKKAPPEVQVPA 477 (479)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~h~~~d~~~~-g~~~~~~~~~~~~~ 477 (479)
.+++++|++.+|++|||+|||+|||||++++ |+|++||++||+..
T Consensus 75 ~~~~~~~~i~~li~~~I~ly~~Ht~lD~~~~~G~n~~La~~Lgl~~ 120 (242)
T 2yyb_A 75 IVGHHKRRLETLFQGGINLYAAHLPLDAHEEVGNNFVLARELGLVD 120 (242)
T ss_dssp SCHHHHHHHHHHHHTTCEEEECSHHHHHCTTTCHHHHHHHTTTCCS
T ss_pred cccHHHHHHHHHHHCCCeEEEeccHHhcCCCcCHHHHHHHHcCCCC
Confidence 7789999999999999999999999999999 99999999999863
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-31 Score=250.89 Aligned_cols=247 Identities=14% Similarity=0.080 Sum_probs=204.8
Q ss_pred cccccccccceEEEEECCCCC-eEEEeeCCCcEEEEec-ccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWVM-VIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~-~l~t~~~dg~v~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
.+.+.+|...|++++|+|+++ +|++|+.||.|++||+ .+++. .
T Consensus 49 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~---------------------------------- 93 (342)
T 1yfq_A 49 LLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-Q---------------------------------- 93 (342)
T ss_dssp EEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-E----------------------------------
T ss_pred ceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-E----------------------------------
Confidence 455668999999999999999 9999999999999998 65542 1
Q ss_pred eEEeccc--cCCcEEEEEECCCCCEEEEEECCCeEEEEECCC---------CeEEEeEEEeCCCCcEEEEEEcCCCCEEE
Q psy14815 82 KAILSDG--HQRTIRETAWSPCGNFIASASFDATTAVWDKRS---------GQFECNATLEGHENEVKSVTWSKNGQFLA 150 (479)
Q Consensus 82 ~~~~~~~--~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~---------~~~~~~~~~~~~~~~v~~l~~~~~~~~l~ 150 (479)
...+ |...|.+++|+| +.++++++.|+.|++||+++ ++ .+..+. |...|.+++|++++ ++
T Consensus 94 ---~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~~-~~~~v~~~~~~~~~--l~ 164 (342)
T 1yfq_A 94 ---ALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNL--NSNNTK-VKNKIFTMDTNSSR--LI 164 (342)
T ss_dssp ---ECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEES--CSSSSS-SCCCEEEEEECSSE--EE
T ss_pred ---eccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCC--eeeEEe-eCCceEEEEecCCc--EE
Confidence 1245 899999999999 99999999999999999876 43 334444 88899999999887 99
Q ss_pred EEeCCCcEEEEEeCC-CCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCc--ccceEeeeeecCCCc
Q psy14815 151 TCSRDKSVWVWEVGE-EDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKA--EADWINFATLKSHTS 226 (479)
Q Consensus 151 ~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~~~ 226 (479)
+++.|+.|++||++. ... ........|...+++++|+| +++++++++.||.|++|+++.. .........+..|..
T Consensus 165 ~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~ 243 (342)
T 1yfq_A 165 VGMNNSQVQWFRLPLCEDD-NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRL 243 (342)
T ss_dssp EEESTTEEEEEESSCCTTC-CCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCC
T ss_pred EEeCCCeEEEEECCccccc-cceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccc
Confidence 999999999999998 432 22334456788999999999 9999999999999999999876 100123455566644
Q ss_pred ---------cEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCe
Q psy14815 227 ---------TVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDL 297 (479)
Q Consensus 227 ---------~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~ 297 (479)
.|.+++|+|++++|++++.||.|++||+.. .+++..+.+||..+|.+++ |++++
T Consensus 244 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~---------------~~~~~~~~~~h~~~v~~~~--~~~~~ 306 (342)
T 1yfq_A 244 NLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT---------------RKKIKNFAKFNEDSVVKIA--CSDNI 306 (342)
T ss_dssp CTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT---------------TEEEEECCCCSSSEEEEEE--ECSSE
T ss_pred cccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc---------------HhHhhhhhcccCCCceEec--CCCCe
Confidence 999999999999999999999999999843 3667788887688999999 99999
Q ss_pred EEEEeCCCe-EEEccc
Q psy14815 298 IATACGDDA-IRIFKE 312 (479)
Q Consensus 298 l~~~~~dg~-i~vw~~ 312 (479)
|++++.||. .+.|..
T Consensus 307 l~s~s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 307 LCLATSDDTFKTNAAI 322 (342)
T ss_dssp EEEEEECTHHHHCSSS
T ss_pred EEEEecCCcccccccc
Confidence 999999999 777764
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-30 Score=253.50 Aligned_cols=252 Identities=12% Similarity=0.030 Sum_probs=201.3
Q ss_pred ccccccceEEEEECCCCCeE-EEeeCCCcEEEEecc--cccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 7 LKGHQGRVWNVSWNPQGTMI-SSCGEDKNIRLWVMV--IREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~~~l-~t~~~dg~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+.+|.+.|++++|+|++++| ++|+.||+|++||+. +++.+..+.
T Consensus 98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~--------------------------------- 144 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRK--------------------------------- 144 (450)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEE---------------------------------
T ss_pred CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeee---------------------------------
Confidence 44688899999999999996 899999999999987 555443321
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEE--EeEEEeCCCCcEEEEEEcCC---CCEEEEEeCCCcE
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE--CNATLEGHENEVKSVTWSKN---GQFLATCSRDKSV 158 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~v~~l~~~~~---~~~l~~~~~dg~i 158 (479)
...|...|.+++|+|++++|++|+.+|.|++|++.+++.. ....+.+|...|.+++|+|+ +++|++|+.|+.|
T Consensus 145 --~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i 222 (450)
T 2vdu_B 145 --RFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHI 222 (450)
T ss_dssp --EEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCE
T ss_pred --cccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcE
Confidence 1256789999999999999999999999999999887532 22366779999999999999 9999999999999
Q ss_pred EEEEeCCCCceeeeee-eeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeec---------------
Q psy14815 159 WVWEVGEEDEYECAAV-INAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLK--------------- 222 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~-~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--------------- 222 (479)
++||+++.. .... +.+|...|++++|+ ++++|++++.|+.|++||+++++. +..+.
T Consensus 223 ~vwd~~~~~---~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~~ 294 (450)
T 2vdu_B 223 KISHYPQCF---IVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKN----LSTFDYNSLIKPYLNDQHLA 294 (450)
T ss_dssp EEEEESCTT---CEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCE----EEEEECHHHHGGGCCTTSBC
T ss_pred EEEECCCCc---eeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcE----eeeecchhhhhhhhhhcccc
Confidence 999998874 3333 56899999999999 999999999999999999997763 22222
Q ss_pred ----------CCCccEEEEEEccCCCEEEEee-CCCeEEEEec--cCCCCCCCCCCCCCCCceEEEEEEeccccccEEEE
Q psy14815 223 ----------SHTSTVWSLAFDRIGSRLATCS-DDATVKIWKE--YKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI 289 (479)
Q Consensus 223 ----------~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 289 (479)
.....|.+++|+|++++|++++ .|+.|++|++ ... .....+..+..+ ..|.++
T Consensus 295 ~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~------------~~l~~~~~~~~~--~~v~~~ 360 (450)
T 2vdu_B 295 PPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQK------------GDLALKQIITFP--YNVISL 360 (450)
T ss_dssp ----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSST------------TCEEEEEEEECS--SCEEEE
T ss_pred cccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCC------------CceeeccEeccC--CceEEE
Confidence 2345799999999999999998 8999999998 222 223566777775 689999
Q ss_pred EecCCCCeEEEEeC------CCeEEEcccCCC
Q psy14815 290 SWCHLTDLIATACG------DDAIRIFKENPE 315 (479)
Q Consensus 290 ~~~~~~~~l~~~~~------dg~i~vw~~~~~ 315 (479)
+|+|++.++++++. +..|.+|.+...
T Consensus 361 ~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 361 SAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp EEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred EecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 99996544444443 456888877544
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=3e-31 Score=254.92 Aligned_cols=259 Identities=17% Similarity=0.254 Sum_probs=198.4
Q ss_pred ccccCCcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEE-----------eCCCCcEEEEEEcC-CCCEEEEE
Q psy14815 86 SDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATL-----------EGHENEVKSVTWSK-NGQFLATC 152 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~-----------~~~~~~v~~l~~~~-~~~~l~~~ 152 (479)
..+|.+.|++++|+| ++++|++|+.||.|++||+.+++....... .+|...|.+++|+| ++.+|+++
T Consensus 39 ~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 39 ERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS 118 (408)
T ss_dssp CCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE
T ss_pred eeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE
Confidence 367999999999999 999999999999999999988753222221 25899999999999 78899999
Q ss_pred eCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCC---CEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEE
Q psy14815 153 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD---NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW 229 (479)
Q Consensus 153 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~ 229 (479)
+.||.|++||+++. .....+. +...+.++.|+|.+ .++++++.+|.|++||++++.. ...+..|...|.
T Consensus 119 ~~d~~i~iwd~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~----~~~~~~~~~~v~ 190 (408)
T 4a11_B 119 SFDKTLKVWDTNTL---QTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC----SHILQGHRQEIL 190 (408)
T ss_dssp ETTSEEEEEETTTT---EEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCC----CEEECCCCSCEE
T ss_pred eCCCeEEEeeCCCC---ccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce----eeeecCCCCcEE
Confidence 99999999999987 3333333 67789999999844 5999999999999999997664 667788999999
Q ss_pred EEEEccCCCE-EEEeeCCCeEEEEeccCCCCCCCCCCC-CCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeE
Q psy14815 230 SLAFDRIGSR-LATCSDDATVKIWKEYKPGNSAGIPTP-DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAI 307 (479)
Q Consensus 230 ~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i 307 (479)
+++|+|++++ +++++.||.|++||++........... .............. +...|.+++|+|++++|++++.||.|
T Consensus 191 ~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i 269 (408)
T 4a11_B 191 AVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTA-HNGKVNGLCFTSDGLHLLTVGTDNRM 269 (408)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCS-CSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeecccccc-ccCceeEEEEcCCCCEEEEecCCCeE
Confidence 9999999984 889999999999999766422111100 00000001111233 37899999999999999999999999
Q ss_pred EEcccCCCCCCCCc--------------------------------------eeeEEEeccccccccceeEEEecCCCCC
Q psy14815 308 RIFKENPEAGDSDM--------------------------------------VSFDLVHTEHRAHNQDVNCVAWNPVVPE 349 (479)
Q Consensus 308 ~vw~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 349 (479)
++||+.+++..... ....++. .+.+|...|++++|+|++++
T Consensus 270 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~-~~~~~~~~v~~~~~s~~~~~ 348 (408)
T 4a11_B 270 RLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQIT-MLKGHYKTVDCCVFQSNFQE 348 (408)
T ss_dssp EEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEE-EECCCSSCEEEEEEETTTTE
T ss_pred EEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCccee-eeccCCCeEEEEEEcCCCCE
Confidence 99999876521100 0011222 23579999999999999999
Q ss_pred CCccc
Q psy14815 350 PQKTN 354 (479)
Q Consensus 350 l~~~~ 354 (479)
|+.++
T Consensus 349 l~s~~ 353 (408)
T 4a11_B 349 LYSGS 353 (408)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 86654
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.9e-31 Score=255.07 Aligned_cols=244 Identities=11% Similarity=0.068 Sum_probs=167.9
Q ss_pred eEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcE
Q psy14815 14 VWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 93 (479)
Q Consensus 14 V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v 93 (479)
+....+++++.+|++++.|++|+|||+.+++.... .......+|.+.|
T Consensus 92 ~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~--------------------------------~~~~~~~gH~~~v 139 (393)
T 4gq1_A 92 GNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQ--------------------------------HVLGGKSGHHNFV 139 (393)
T ss_dssp -----CCEEEEEEEEEETTSCEEEEEEETTEEEEE--------------------------------EEECTTTSCSSCE
T ss_pred cceeecCCCCCEEEEEeCCCcEEEEECCCCcccee--------------------------------eeecccCCCCCce
Confidence 33333444566788888899999998776543211 1111246899999
Q ss_pred EEEEECC--------CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEEeC
Q psy14815 94 RETAWSP--------CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVG 164 (479)
Q Consensus 94 ~~v~~~~--------~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~vwd~~ 164 (479)
.+++|+| ++++|++|+.|++|+|||++++. ....+..|...|.+++|+|++ .+|++|+.||.|++||++
T Consensus 140 ~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~--~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~ 217 (393)
T 4gq1_A 140 NDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG--PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWT 217 (393)
T ss_dssp EEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE--EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETT
T ss_pred EEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc--eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECC
Confidence 9999997 78999999999999999998876 456666788999999999987 489999999999999998
Q ss_pred CCCceeee----------------------eeeeccccceeEEEEe-cCCCEEEEEEcCCcEEEEecCCcccceEeeeee
Q psy14815 165 EEDEYECA----------------------AVINAHIQDVKKVRFH-PFDNILASASYDDTVKLFKEDKAEADWINFATL 221 (479)
Q Consensus 165 ~~~~~~~~----------------------~~~~~~~~~v~~l~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 221 (479)
+++..... ....+|...+.++.|+ |+++.|++++.|+++++||+..+.. ...+
T Consensus 218 t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~----~~~l 293 (393)
T 4gq1_A 218 LNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANND----YNEI 293 (393)
T ss_dssp CCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------
T ss_pred CCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCC----CceE
Confidence 76421111 1124577788999987 6999999999999999999986543 2223
Q ss_pred cCCCccEEEE------------------EEcc--CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc
Q psy14815 222 KSHTSTVWSL------------------AFDR--IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH 281 (479)
Q Consensus 222 ~~~~~~v~~~------------------~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (479)
..|...+..+ .|+| ++.++++|+.||.|++||+..+.. ...+.+|
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~---------------~~~~~~~ 358 (393)
T 4gq1_A 294 SDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDS---------------NSIPIQL 358 (393)
T ss_dssp ----------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTC---------------CEEEEEC
T ss_pred eeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcE---------------EEEecCC
Confidence 3333333332 2333 234567888999999999865533 2344555
Q ss_pred ccccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 282 HGRTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 282 ~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
..+|.+++|+|+|++||+++.+| +.+|.+
T Consensus 359 -~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 359 -GMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp -SSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred -CCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 67999999999999999998766 445544
|
| >1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7.9e-33 Score=240.85 Aligned_cols=117 Identities=19% Similarity=0.292 Sum_probs=107.8
Q ss_pred ccHHHHHHHHHHhCCCccCCCCCcceeeeccCCCcCcccEEEEEecCCHHHHHHHHHcCCCEEEEeCCCCc-ccccccCc
Q psy14815 355 LTLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIAYHPPIF-APLKRVTN 433 (479)
Q Consensus 355 ~~~~~~~~~l~~~~p~~~a~~wd~~Gl~v~~~~~~~~v~~il~~~d~t~~~~~~a~~~~~~~i~~~h~~~~-~~~~~~~~ 433 (479)
|+..+++..+++++|+..+++|||+|||| ++.++|+++++++|+|++++++|+++|||+||+|||+|| +++++++.
T Consensus 1 M~~~ei~~~le~~~p~~~~~~~d~~GL~v---~~~~~V~~I~~~lD~t~~vi~eAi~~~adlIitHHP~~f~~~~~~i~~ 77 (247)
T 1nmo_A 1 MKNTELEQLINEKLNSAAISDYAPNGLQV---EGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRG 77 (247)
T ss_dssp CBHHHHHHHHHHHTTCTTSCCSSCCEEEE---CCCSBCCEEEEEEECCHHHHHHHHHTTCSEEEEEECSCCTTSCCCCCT
T ss_pred CcHHHHHHHHHHhCChhhhCCcCCCeeEE---CCCCccCEEEEEEcCCHHHHHHHHhCCCCEEEECCchhccCCCccccc
Confidence 35679999999999977777999999999 334899999999999999999999999999999999999 88888764
Q ss_pred CChhhHHHHHHHhcCceEEeccccccccCC-CccccCCCcCCCC
Q psy14815 434 DKWKERVVSTCLAHNIAVYSPHTTWDAIQE-GRTKKAPPEVQVP 476 (479)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~h~~~d~~~~-g~~~~~~~~~~~~ 476 (479)
.++|++.+|++|||+|||+|||||++++ |+|++||++||+.
T Consensus 78 --~~~~~i~~li~~~I~ly~~HtnlD~~~~~G~n~~La~~Lgl~ 119 (247)
T 1nmo_A 78 --MKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGIT 119 (247)
T ss_dssp --HHHHHHHHHHHTTCEEEECCHHHHHCTTTSHHHHHHHHHTEE
T ss_pred --hHHHHHHHHHHCCCEEEEeeechhhCCCCCHHHHHHHHcCCC
Confidence 4789999999999999999999999999 9999999999975
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=9.6e-30 Score=246.95 Aligned_cols=261 Identities=21% Similarity=0.342 Sum_probs=214.8
Q ss_pred ccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCC
Q psy14815 54 VETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGH 133 (479)
Q Consensus 54 ~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~ 133 (479)
++..+++++.|+.|++||...... .....+|...|.+++| ++++|++|+.||.|++||+.+++ ....+.+|
T Consensus 142 d~~~l~~g~~dg~i~iwd~~~~~~-----~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~--~~~~~~~h 212 (435)
T 1p22_A 142 DDQKIVSGLRDNTIKIWDKNTLEC-----KRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE--MLNTLIHH 212 (435)
T ss_dssp CSSEEEEEESSSCEEEEESSSCCE-----EEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC--EEEEECCC
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeE-----EEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc--EEEEEcCC
Confidence 466788999999999999874221 2234689999999999 78899999999999999999987 67788899
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCccc
Q psy14815 134 ENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA 213 (479)
Q Consensus 134 ~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 213 (479)
...|.+++|+ +..+++|+.||.|++||+++.........+.+|...|.+++| +++++++|+.||.|++||++++..
T Consensus 213 ~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~ 288 (435)
T 1p22_A 213 CEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF 288 (435)
T ss_dssp CSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCE
T ss_pred CCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcE
Confidence 9999999997 459999999999999999987655555778899999999999 588999999999999999997653
Q ss_pred ceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC
Q psy14815 214 DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 293 (479)
Q Consensus 214 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~ 293 (479)
+..+.+|...|.++.|+ ++++++|+.||.|++||++.. +++..+.+| ...|.+++|
T Consensus 289 ----~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~---------------~~~~~~~~h-~~~v~~~~~-- 344 (435)
T 1p22_A 289 ----VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECG---------------ACLRVLEGH-EELVRCIRF-- 344 (435)
T ss_dssp ----EEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTC---------------CEEEEECCC-SSCEEEEEC--
T ss_pred ----EEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCC---------------CEEEEEeCC-cCcEEEEEe--
Confidence 67788999999999995 689999999999999998543 567788886 789999999
Q ss_pred CCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 294 LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 294 ~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
++.+|++|+.||.|++||+..+..........++. ...+|.+.|.+++| ++.+|+.++
T Consensus 345 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~~~h~~~v~~l~~--~~~~l~s~s 402 (435)
T 1p22_A 345 DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLR-TLVEHSGRVFRLQF--DEFQIVSSS 402 (435)
T ss_dssp CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEE-EECCCSSCCCCEEE--CSSCEEECC
T ss_pred cCCEEEEEeCCCcEEEEECCCCCCccccccchhee-eccCCCCCeEEEEe--CCCEEEEEe
Confidence 78899999999999999997654221111110222 23589999999999 677775543
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.9e-30 Score=241.39 Aligned_cols=251 Identities=18% Similarity=0.257 Sum_probs=201.7
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEE
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAI 84 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~ 84 (479)
..+.+|.+.|++++|+|++++|++++.||.|++||+.+++.+.
T Consensus 80 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~------------------------------------- 122 (368)
T 3mmy_A 80 KAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ------------------------------------- 122 (368)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-------------------------------------
T ss_pred EEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-------------------------------------
Confidence 6788999999999999999999999999999999987655432
Q ss_pred eccccCCcEEEEEE--CCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy14815 85 LSDGHQRTIRETAW--SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 85 ~~~~~~~~v~~v~~--~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd 162 (479)
...|...|.+++| +|++.+|++++.||.|++||+++++ ....+..+. .+.++.+.+ ..+++++.++.+++|+
T Consensus 123 -~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~i~~~~ 196 (368)
T 3mmy_A 123 -IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN--PMMVLQLPE-RCYCADVIY--PMAVVATAERGLIVYQ 196 (368)
T ss_dssp -EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS--CSEEEECSS-CEEEEEEET--TEEEEEEGGGCEEEEE
T ss_pred -eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc--EEEEEecCC-CceEEEecC--CeeEEEeCCCcEEEEE
Confidence 1368899999999 8999999999999999999999886 556666554 566777764 5889999999999999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCCE----EEEEEcCCcEEEEecCCcccceEeeeeecCCCc------------
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDNI----LASASYDDTVKLFKEDKAEADWINFATLKSHTS------------ 226 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~----l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~------------ 226 (479)
++..... .......+...+.++.+.++... +++++.||.|++||++.... ......+..|..
T Consensus 197 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 274 (368)
T 3mmy_A 197 LENQPSE-FRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNP-AKDNFTFKCHRSNGTNTSAPQDIY 274 (368)
T ss_dssp CSSSCEE-EEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCH-HHHSEEEECSEEC----CCCEEEC
T ss_pred eccccch-hhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCc-cccceeeeeeeccccccccccccc
Confidence 9876421 12222234455667777665544 99999999999999987632 122445566665
Q ss_pred cEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCe
Q psy14815 227 TVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDA 306 (479)
Q Consensus 227 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~ 306 (479)
.|++++|+|++++|++++.||.|++||+.. .+++..+.+| ..+|.+++|+|++++|++++.|+.
T Consensus 275 ~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~---------------~~~~~~~~~~-~~~v~~~~~s~~g~~l~~~s~d~~ 338 (368)
T 3mmy_A 275 AVNGIAFHPVHGTLATVGSDGRFSFWDKDA---------------RTKLKTSEQL-DQPISACCFNHNGNIFAYASSYDW 338 (368)
T ss_dssp CEEEEEECTTTCCEEEEETTSCEEEEETTT---------------TEEEEECCCC-SSCEEEEEECTTSSCEEEEECCCS
T ss_pred ceEEEEEecCCCEEEEEccCCeEEEEECCC---------------CcEEEEecCC-CCCceEEEECCCCCeEEEEecccc
Confidence 799999999999999999999999999843 3667788876 789999999999999999999987
Q ss_pred EEEcccCCCC
Q psy14815 307 IRIFKENPEA 316 (479)
Q Consensus 307 i~vw~~~~~~ 316 (479)
.+.|++...+
T Consensus 339 ~~~~~~~~~~ 348 (368)
T 3mmy_A 339 SKGHEFYNPQ 348 (368)
T ss_dssp TTCGGGCCTT
T ss_pred cccccccCCC
Confidence 7777765443
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-29 Score=226.35 Aligned_cols=272 Identities=14% Similarity=0.134 Sum_probs=172.9
Q ss_pred eEEEEECCCCC---eEEEeeCCCcEEEEecccc---cccccccCCCccceEEEeecC------------C--cEEEecCC
Q psy14815 14 VWNVSWNPQGT---MISSCGEDKNIRLWVMVIR---EPYEKLHGLPVETSLRQLVED------------K--NIRLWGKE 73 (479)
Q Consensus 14 V~~l~~s~~~~---~l~t~~~dg~v~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~------------~--~i~~w~~~ 73 (479)
+.++-|-..|- .++++++. +|++|+..++ +.+.++..+...-.-+....| . .++..-..
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~-~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~s 120 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACED-VVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCS 120 (356)
T ss_dssp EEEEEEC----CEEEEEEEESS-EEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-
T ss_pred EeeeeeccCCCCccEEEEeccc-eEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEEC
Confidence 55566654333 67788754 8999999888 556665554322111111111 0 11111111
Q ss_pred CCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEE--CCCeEEEEECC-CCeEEEeEEEeCCCCcEEEEEEcC---CCC
Q psy14815 74 SFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS--FDATTAVWDKR-SGQFECNATLEGHENEVKSVTWSK---NGQ 147 (479)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~--~dg~i~iwd~~-~~~~~~~~~~~~~~~~v~~l~~~~---~~~ 147 (479)
..+... .......+|...|..+ ++++++.+++ .|+.|++|++. +++ .+..+..|...++.++|++ ++.
T Consensus 121 pd~~~~-~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~--~~~s~~~~~~~v~~l~fs~~~g~~~ 194 (356)
T 2w18_A 121 SDDESE-KQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGG--GKENQFLMPPEETILTFAEVQGMQE 194 (356)
T ss_dssp -----C-CEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSC--EEEEEEECCCSSCEEEEEEEETSTT
T ss_pred CCcccc-ccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCc--eeeeeccCCCceeeEEeeccCCCCc
Confidence 000000 0111112333333332 3333333322 48899999984 465 4566677888888889988 779
Q ss_pred EEEEEeCCCcEEEEEeCCCCceeeeeeeeccc---cceeEEEEecCCCEE------------EEEEcCCcEEEEecCCcc
Q psy14815 148 FLATCSRDKSVWVWEVGEEDEYECAAVINAHI---QDVKKVRFHPFDNIL------------ASASYDDTVKLFKEDKAE 212 (479)
Q Consensus 148 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~---~~v~~l~~~~~~~~l------------~~~~~dg~i~i~d~~~~~ 212 (479)
.|++|+.|++|++||++++ +++..+.+|. ..+.+++|+|++.++ ++|+.|++|++||..++.
T Consensus 195 ~LaSgS~D~TIkIWDl~TG---k~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk 271 (356)
T 2w18_A 195 ALLGTTIMNNIVIWNLKTG---QLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL 271 (356)
T ss_dssp EEEEEETTSEEEEEETTTC---CEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTE
T ss_pred eEEEecCCCcEEEEECCCC---cEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE
Confidence 9999999999999999998 5556665543 367788999999876 567889999999998766
Q ss_pred cceEeeee-ecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEe
Q psy14815 213 ADWINFAT-LKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW 291 (479)
Q Consensus 213 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 291 (479)
........ ..+|...+.+..++ +..+++++.|++|+|||+. +++++.++.+|+...+.+++|
T Consensus 272 ~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~---------------tGk~l~tL~gH~~~vvs~vaf 334 (356)
T 2w18_A 272 SVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLL---------------LGQCTALLPPVSDQHWSFVKW 334 (356)
T ss_dssp EEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETT---------------TCSEEEEECCC--CCCCEEEE
T ss_pred EEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECC---------------CCcEEEEecCCCCCeEEEEEE
Confidence 31111111 14666665555554 7899999999999999984 446788998885555667999
Q ss_pred cCCCCeEEEEeCCCeEEEccc
Q psy14815 292 CHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 292 ~~~~~~l~~~~~dg~i~vw~~ 312 (479)
+|+|++|++|+.|++|+|||+
T Consensus 335 SPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 335 SGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CSSSSEEEEECTTSCEEEEEE
T ss_pred CCCCCEEEEEECCCcEEEecC
Confidence 999999999999999999986
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-29 Score=242.82 Aligned_cols=271 Identities=8% Similarity=-0.005 Sum_probs=213.0
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR 91 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 91 (479)
..+.+++|+|++.++++++.|++|++||+.+++....+.. ....+|..
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~--------------------------------~~~~~~~~ 170 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPP--------------------------------EKYKKKLG 170 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCC--------------------------------HHHHTTCC
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCc--------------------------------ccccccCC
Confidence 4466999999888888888899999999987765432210 01247888
Q ss_pred cEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEEeCCCCcee
Q psy14815 92 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDEYE 170 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~ 170 (479)
.|.+++|++++.++++++.|+.|++||+++++ ....+..|...+.+++|+|+++.+++++ .++.|++||++++ .
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~---~ 245 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQANAVHVFDLKTLA--YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK---L 245 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC--EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT---E
T ss_pred ceeEEEEcCCCEEEEEECCCCEEEEEECCCce--EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC---c
Confidence 99999999999999999999999999999886 5567778889999999999999886554 7999999999887 3
Q ss_pred eeeeeeccccceeEEEEecCCCEEEEEE--------cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEE-E
Q psy14815 171 CAAVINAHIQDVKKVRFHPFDNILASAS--------YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL-A 241 (479)
Q Consensus 171 ~~~~~~~~~~~v~~l~~~~~~~~l~~~~--------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~ 241 (479)
....+.. ...+.+++|+|+++.+++++ .||.|++||+++++. ... ..|...+.+++|+|+++.+ +
T Consensus 246 ~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~----~~~-~~~~~~~~~~~~~~~g~~l~~ 319 (433)
T 3bws_A 246 EIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL----IDT-IGPPGNKRHIVSGNTENKIYV 319 (433)
T ss_dssp EEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE----EEE-EEEEECEEEEEECSSTTEEEE
T ss_pred EEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE----Eee-ccCCCCcceEEECCCCCEEEE
Confidence 4444444 34589999999999999988 488999999987653 222 2456688999999999765 6
Q ss_pred EeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeC---------------CCe
Q psy14815 242 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG---------------DDA 306 (479)
Q Consensus 242 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~---------------dg~ 306 (479)
+++.|+.|++||+... +.+..+.. ...+.+++|+|+++++++++. ||.
T Consensus 320 ~~~~~~~v~v~d~~~~---------------~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~ 382 (433)
T 3bws_A 320 SDMCCSKIEVYDLKEK---------------KVQKSIPV--FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGK 382 (433)
T ss_dssp EETTTTEEEEEETTTT---------------EEEEEEEC--SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCE
T ss_pred EecCCCEEEEEECCCC---------------cEEEEecC--CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceE
Confidence 6689999999998432 44455542 567999999999998888876 579
Q ss_pred EEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 307 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 307 i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
|++||+.+++ ....+ .. ...+.+++|+|++++|+.+
T Consensus 383 v~~~d~~~~~---------~~~~~-~~-~~~~~~~~~s~dg~~l~~~ 418 (433)
T 3bws_A 383 VYVIDTTTDT---------VKEFW-EA-GNQPTGLDVSPDNRYLVIS 418 (433)
T ss_dssp EEEEETTTTE---------EEEEE-EC-SSSEEEEEECTTSCEEEEE
T ss_pred EEEEECCCCc---------EEEEe-cC-CCCCceEEEcCCCCEEEEE
Confidence 9999998876 33332 22 4578999999999988644
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-29 Score=240.26 Aligned_cols=268 Identities=12% Similarity=0.164 Sum_probs=185.5
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccc--------cccccCCCccceEEEeecCCcEEEecCCCCC
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREP--------YEKLHGLPVETSLRQLVEDKNIRLWGKESFG 76 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~ 76 (479)
+++++|...|++++|+|+| .++++.+|+.+.... +..+...|++..+++++.++.+++|+.+.
T Consensus 46 ~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-- 116 (588)
T 2j04_A 46 KDINCNSKNLFHVKEFPLE-------FENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-- 116 (588)
T ss_dssp SCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--
T ss_pred ceecCCCccEEEEEECCCC-------CcceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--
Confidence 3445666666666666666 455666665442221 22223345556666666666666666431
Q ss_pred CceeeeEEeccccCC-----cEEEEEECCCCCEEEEEECCCeEEEEECCCCeE-----EEeEEE----eCCCCcEEEEEE
Q psy14815 77 NKFTAKAILSDGHQR-----TIRETAWSPCGNFIASASFDATTAVWDKRSGQF-----ECNATL----EGHENEVKSVTW 142 (479)
Q Consensus 77 ~~~~~~~~~~~~~~~-----~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~-----~~~~~~----~~~~~~v~~l~~ 142 (479)
.... .. |.. .|.+++|||||++|++|+.||+|++||+.++.. ..+..+ .+|...|.+++|
T Consensus 117 ----~l~~-l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVaw 190 (588)
T 2j04_A 117 ----MLTN-LD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVW 190 (588)
T ss_dssp ----EEEE-CC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEE
T ss_pred ----eeee-cc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEE
Confidence 1111 23 443 599999999999999999999999999998742 134555 667789999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEeCCCCceeeeeee-eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeee
Q psy14815 143 SKNGQFLATCSRDKSVWVWEVGEEDEYECAAVI-NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL 221 (479)
Q Consensus 143 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 221 (479)
+|+| +++++.|+.|++||+.+.........+ ..|...|.+++|+ ++.|++++ +++|++||+.++.. ....
T Consensus 191 SPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~----~~~~ 261 (588)
T 2j04_A 191 YEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSI----SSLK 261 (588)
T ss_dssp ETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEE----EEEE
T ss_pred cCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeE----EEEE
Confidence 9999 888999999999999887532223445 4788899999999 68899887 69999999986552 1223
Q ss_pred cCCCccEEEEEE--ccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCC-----C-------CceEEEEEEeccccccEE
Q psy14815 222 KSHTSTVWSLAF--DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDN-----D-------SVWKCVCTLSGHHGRTIY 287 (479)
Q Consensus 222 ~~~~~~v~~~~~--~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-----~-------~~~~~~~~~~~~~~~~i~ 287 (479)
.+|...|.+++| +|++..+++++.||+ ++|....-. +..... + ..+..+..+.+ ...|+
T Consensus 262 ~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~----~spd~~l~a~~d~~v~lW~~~g~~l~~~~~--~~~I~ 334 (588)
T 2j04_A 262 TGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELH----VTADNIIAPYLEKKFKKWSTIWNEFNNYET--TLVIH 334 (588)
T ss_dssp CSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEE----EECCCSSHHHHHHHHHHTTTTTTSSSSSCC--EEEEE
T ss_pred cCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEE----ECCCceEEEEcCCEEEEEECCCCceeeecc--ceEEE
Confidence 379999999999 999999999999999 999974210 000000 0 00001112222 45699
Q ss_pred EEEecCCCCeEEEEeC
Q psy14815 288 DISWCHLTDLIATACG 303 (479)
Q Consensus 288 ~l~~~~~~~~l~~~~~ 303 (479)
+++|+|||+.+|+++.
T Consensus 335 ~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 335 GISLSPDGYSIAIVYD 350 (588)
T ss_dssp EEEECTTSSEEEEEEE
T ss_pred EEEECCCCCEEEEEEe
Confidence 9999999999998874
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-29 Score=237.27 Aligned_cols=232 Identities=11% Similarity=0.040 Sum_probs=179.5
Q ss_pred CccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECC---------CCe
Q psy14815 53 PVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR---------SGQ 123 (479)
Q Consensus 53 ~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~---------~~~ 123 (479)
.++..+++++.|+.|++||+.......... ...|.++.|+|+ +++++.|++|++|+.. +++
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-------~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~ 115 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTIT-------TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNK 115 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEE-------EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCC
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEe-------cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcc
Confidence 456778999999999999998533222211 456778888887 9999999999999765 333
Q ss_pred EEEeEEE-eCCCCcEEEEEEcC--CCCEEEEEeCCCcEEEEEeCCCCceeeeeee-eccccceeEEEEecCCCEEEEEEc
Q psy14815 124 FECNATL-EGHENEVKSVTWSK--NGQFLATCSRDKSVWVWEVGEEDEYECAAVI-NAHIQDVKKVRFHPFDNILASASY 199 (479)
Q Consensus 124 ~~~~~~~-~~~~~~v~~l~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~~~~~ 199 (479)
.+..+ ..|...|.+++|+| +++++++++.||.|++||+++++. .... ..+...+++++|+|++++|++|+.
T Consensus 116 --~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~---~~~~~~~~~~~i~~~~~~pdg~~lasg~~ 190 (343)
T 3lrv_A 116 --VLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ---YIVHSAKSDVEYSSGVLHKDSLLLALYSP 190 (343)
T ss_dssp --EEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE---EEEECCCSSCCCCEEEECTTSCEEEEECT
T ss_pred --eeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE---EEEEecCCCCceEEEEECCCCCEEEEEcC
Confidence 12233 35778899999999 999999999999999999998743 3333 345567999999999999999999
Q ss_pred CCcEEEEecCCcccceEeeeeecC-CCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEE
Q psy14815 200 DDTVKLFKEDKAEADWINFATLKS-HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 278 (479)
Q Consensus 200 dg~i~i~d~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (479)
||.|++||++++.. ....+.. |...|++++|+|++.+|++++ |+.|++||++.......+.. +
T Consensus 191 dg~i~iwd~~~~~~---~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~------------~ 254 (343)
T 3lrv_A 191 DGILDVYNLSSPDQ---ASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPT------------Y 254 (343)
T ss_dssp TSCEEEEESSCTTS---CCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCC------------C
T ss_pred CCEEEEEECCCCCC---CccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecc------------c
Confidence 99999999998764 1145666 999999999999999999999 55999999987654332211 1
Q ss_pred eccccccE--EEEEecCCCCeEEEEeC-CCeEEEcccCCCC
Q psy14815 279 SGHHGRTI--YDISWCHLTDLIATACG-DDAIRIFKENPEA 316 (479)
Q Consensus 279 ~~~~~~~i--~~l~~~~~~~~l~~~~~-dg~i~vw~~~~~~ 316 (479)
..+ ...+ .+++|+|++++|++++. |+.+++|++....
T Consensus 255 ~~~-~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 255 TIP-EFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp BC------CCEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred ccc-cccccceEEEECCCCCEEEEecCCCCcEEEEEEcccc
Confidence 111 1222 47999999999999998 9999999997654
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-28 Score=232.78 Aligned_cols=293 Identities=14% Similarity=0.151 Sum_probs=222.5
Q ss_pred cccceEEEEECCCCC-eEEEee----CCC----cEEEEec--cccccccc--ccCCC-----------------------
Q psy14815 10 HQGRVWNVSWNPQGT-MISSCG----EDK----NIRLWVM--VIREPYEK--LHGLP----------------------- 53 (479)
Q Consensus 10 h~~~V~~l~~s~~~~-~l~t~~----~dg----~v~iwd~--~~~~~~~~--~~~~~----------------------- 53 (479)
+...+....|++.|. ++++|+ .|| +|+|||+ .+++.+.. +..+.
T Consensus 61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~ 140 (415)
T 2hqs_A 61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKG 140 (415)
T ss_dssp SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCC
T ss_pred cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCC
Confidence 335677788888775 566776 467 8999999 88876622 33221
Q ss_pred -ccceEEEeecC------CcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCC---eEEEEECCCCe
Q psy14815 54 -VETSLRQLVED------KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA---TTAVWDKRSGQ 123 (479)
Q Consensus 54 -~~~~~~~~~~~------~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg---~i~iwd~~~~~ 123 (479)
.+..++..+.+ +.|++||.+. ... ....+|...+.+++|+|+|++|++++.++ .|++||+.+++
T Consensus 141 ~~~~~l~~~s~~~~~~~~~~i~i~d~~g--~~~----~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~ 214 (415)
T 2hqs_A 141 AFRTRIAYVVQTNGGQFPYELRVSDYDG--YNQ----FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA 214 (415)
T ss_dssp CTTCEEEEEEECSSSSCCEEEEEEETTS--CSC----EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC
T ss_pred cCCCEEEEEEecCCCCccceEEEEcCCC--CCC----EEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc
Confidence 14456666554 7899999873 111 12246788999999999999999999885 99999999986
Q ss_pred EEEeEEEeCCCCcEEEEEEcCCCCEEE-EEeCCCc--EEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc-
Q psy14815 124 FECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKS--VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY- 199 (479)
Q Consensus 124 ~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~--i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~- 199 (479)
. ..+..|...+.+++|+|||+.|+ +++.++. |++||+.+++ ...+..|...+.+++|+|+|+.|++++.
T Consensus 215 ~---~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~----~~~l~~~~~~~~~~~~spdg~~l~~~s~~ 287 (415)
T 2hqs_A 215 V---RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ----IRQVTDGRSNNTEPTWFPDSQNLAFTSDQ 287 (415)
T ss_dssp E---EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC----EEECCCCSSCEEEEEECTTSSEEEEEECT
T ss_pred E---EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC----EEeCcCCCCcccceEECCCCCEEEEEECC
Confidence 3 34666788999999999999887 6666665 9999998763 2456677888999999999999998886
Q ss_pred CC--cEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCC---CeEEEEeccCCCCCCCCCCCCCCCceEE
Q psy14815 200 DD--TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD---ATVKIWKEYKPGNSAGIPTPDNDSVWKC 274 (479)
Q Consensus 200 dg--~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~ 274 (479)
++ .|.+||+.++.. ..+..+...+.+++|+|+|++|++++.+ ..|++||+.... .
T Consensus 288 ~g~~~i~~~d~~~~~~-----~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~---------------~ 347 (415)
T 2hqs_A 288 AGRPQVYKVNINGGAP-----QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG---------------V 347 (415)
T ss_dssp TSSCEEEEEETTSSCC-----EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC---------------E
T ss_pred CCCcEEEEEECCCCCE-----EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC---------------E
Confidence 45 577778876552 3445567789999999999999888764 589999985432 1
Q ss_pred EEEEeccccccEEEEEecCCCCeEEEEeCCC---eEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCC
Q psy14815 275 VCTLSGHHGRTIYDISWCHLTDLIATACGDD---AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPE 349 (479)
Q Consensus 275 ~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg---~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 349 (479)
..+..+ . .+.+++|+|+|++|++++.++ .|++||+..+. ...+ ..|.+.|.+++|+|...+
T Consensus 348 -~~l~~~-~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~----------~~~l-~~~~~~v~~~~~~~~~~~ 411 (415)
T 2hqs_A 348 -QVLSST-F-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF----------KARL-PATDGQVKFPAWSPYLHH 411 (415)
T ss_dssp -EECCCS-S-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC----------EEEC-CCSSSEEEEEEECCCCCC
T ss_pred -EEecCC-C-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc----------EEEe-eCCCCCCcCCcccccccc
Confidence 334443 3 789999999999999988877 79999998664 4443 578899999999997543
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-27 Score=228.71 Aligned_cols=269 Identities=13% Similarity=0.113 Sum_probs=204.0
Q ss_pred cccccccccceEEEEECCCCCeE-EEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMI-SSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l-~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
++++.+|. .+.+++|+|++++| ++++.|++|++||+.+++.+..+
T Consensus 25 ~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~--------------------------------- 70 (391)
T 1l0q_A 25 TATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATV--------------------------------- 70 (391)
T ss_dssp EEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEE---------------------------------
T ss_pred EEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEE---------------------------------
Confidence 45566665 58999999999977 67778999999999877654433
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEE-CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEE-EEEeCCCcEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL-ATCSRDKSVWV 160 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~~~~~dg~i~v 160 (479)
.+...+.+++|+|++++++.++ .++.|++||+.+++ ....+.. ...+.+++|+|+++.+ ++++.++.|++
T Consensus 71 -----~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~--~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~ 142 (391)
T 1l0q_A 71 -----PAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNT--VAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSV 142 (391)
T ss_dssp -----ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE--EEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred -----ECCCCccceEECCCCCEEEEEECCCCEEEEEECCCCe--EEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEE
Confidence 1233899999999999886555 56999999999986 4445554 4578999999999977 67788999999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCCCEE-EEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL-ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
||++++ +....+..+ ..+.+++|+|+++.+ ++++.++.|++||++++.. ...+. +...+.+++|+|++++
T Consensus 143 ~d~~~~---~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~----~~~~~-~~~~~~~~~~~~~g~~ 213 (391)
T 1l0q_A 143 INTVTK---AVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV----IDTVK-VEAAPSGIAVNPEGTK 213 (391)
T ss_dssp EETTTT---EEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE----EEEEE-CSSEEEEEEECTTSSE
T ss_pred EECCCC---cEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeE----EEEEe-cCCCccceEECCCCCE
Confidence 999887 444445444 456999999999877 5677889999999987653 33333 5567899999999999
Q ss_pred EEEee---CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeE-EEEeCCCeEEEcccCCC
Q psy14815 240 LATCS---DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACGDDAIRIFKENPE 315 (479)
Q Consensus 240 l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l-~~~~~dg~i~vw~~~~~ 315 (479)
+++++ .++.|++||+... +.+..+..+ ..+.+++|+|+++++ ++++.|+.|++||+.++
T Consensus 214 l~~~~~~~~~~~v~~~d~~~~---------------~~~~~~~~~--~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~ 276 (391)
T 1l0q_A 214 AYVTNVDKYFNTVSMIDTGTN---------------KITARIPVG--PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATN 276 (391)
T ss_dssp EEEEEECSSCCEEEEEETTTT---------------EEEEEEECC--SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred EEEEecCcCCCcEEEEECCCC---------------eEEEEEecC--CCccEEEEccCCCEEEEEcCCCCEEEEEECCCC
Confidence 99888 6899999998433 456666664 357899999999977 66688999999999987
Q ss_pred CCCCCceeeEEEeccccccccce---eEEEecCCCCCC
Q psy14815 316 AGDSDMVSFDLVHTEHRAHNQDV---NCVAWNPVVPEP 350 (479)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~h~~~v---~~~~~sp~~~~l 350 (479)
+ +.. ....|..+. ..+.+.|++..+
T Consensus 277 ~---------~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 304 (391)
T 1l0q_A 277 T---------ITA-TMAVGKNPYASGQFIGSIPVQPVY 304 (391)
T ss_dssp E---------EEE-EEECSSSEECCSSCEEECSSCCCC
T ss_pred c---------EEE-EEECCcCCCccceeeecccccccc
Confidence 6 222 223343332 235667766555
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-28 Score=220.03 Aligned_cols=217 Identities=10% Similarity=0.091 Sum_probs=157.5
Q ss_pred ccceEEEEECCC----CCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 11 QGRVWNVSWNPQ----GTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 11 ~~~V~~l~~s~~----~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
...|++++|+|+ ++++++++.+ +++|++.+++.+.... ...++.|++|++...+.... ..
T Consensus 111 ~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~ss~----------~g~d~~V~~~~~s~dG~~~~----s~ 174 (356)
T 2w18_A 111 IREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLVSSSG----------TLSDQQVEVMTFAEDGGGKE----NQ 174 (356)
T ss_dssp EEEEEEECC------CCEEEEEEEEE--EEEEEETTTEEEEEES----------SSTTCEEEEEEECTTSCEEE----EE
T ss_pred ccceEEEEECCCccccccEEEeCCCe--EEEEecCCCcEEEecc----------cCCCCcEEEEEECCCCceee----ee
Confidence 346777777777 7788887744 7788875444322210 12589999999964332211 12
Q ss_pred cccCCcEEEEEECC---CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCC---CcEEEEEEcCCCCEE-----------
Q psy14815 87 DGHQRTIRETAWSP---CGNFIASASFDATTAVWDKRSGQFECNATLEGHE---NEVKSVTWSKNGQFL----------- 149 (479)
Q Consensus 87 ~~~~~~v~~v~~~~---~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~---~~v~~l~~~~~~~~l----------- 149 (479)
..|...++.++|++ ++.+|++++.|++|+|||+++++ .+..+.+|. ..+.+++|+|+|.++
T Consensus 175 ~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk--~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~ 252 (356)
T 2w18_A 175 FLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQ--LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKES 252 (356)
T ss_dssp EECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCC--EEEEEECCC---CCCEEEEEEETTEEEEEEC-------
T ss_pred ccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCc--EEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcce
Confidence 47888888999998 77999999999999999999997 667777643 367788999999876
Q ss_pred -EEEeCCCcEEEEEeCCCCceeeeeee-----eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC
Q psy14815 150 -ATCSRDKSVWVWEVGEEDEYECAAVI-----NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS 223 (479)
Q Consensus 150 -~~~~~dg~i~vwd~~~~~~~~~~~~~-----~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 223 (479)
++|+.|++|++||..+++ .+..+ .+|...+.+..++ +.++++|+.|++|+|||+.+++. +.++.+
T Consensus 253 laSGs~D~tIklWd~~tgk---~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~----l~tL~g 323 (356)
T 2w18_A 253 ESLRSPVFQLIVINPKTTL---SVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQC----TALLPP 323 (356)
T ss_dssp -----CCEEEEEEETTTTE---EEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSE----EEEECC
T ss_pred eeccCCCcEEEEEECCCCE---EEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcE----EEEecC
Confidence 567889999999998874 33222 3555444444444 78899999999999999998764 778888
Q ss_pred CCccEE-EEEEccCCCEEEEeeCCCeEEEEec
Q psy14815 224 HTSTVW-SLAFDRIGSRLATCSDDATVKIWKE 254 (479)
Q Consensus 224 ~~~~v~-~~~~~~~~~~l~s~~~dg~i~iwd~ 254 (479)
|...+. +++|+|+|++|++|+.|++|+|||+
T Consensus 324 H~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 324 VSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp C--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 887655 5899999999999999999999995
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.96 E-value=5.7e-27 Score=224.05 Aligned_cols=250 Identities=11% Similarity=0.081 Sum_probs=193.4
Q ss_pred CeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCC
Q psy14815 24 TMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGN 103 (479)
Q Consensus 24 ~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~ 103 (479)
.++++++.|++|++||+.+++.+..+ . +...+.+++|+|+++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~-------------------------------------~-~~~~~~~~~~s~dg~ 44 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATI-------------------------------------P-VGSNPMGAVISPDGT 44 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEE-------------------------------------E-CSSSEEEEEECTTSS
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEe-------------------------------------e-cCCCcceEEECCCCC
Confidence 46788889999999998876654433 2 234589999999999
Q ss_pred EE-EEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEEeCCCCceeeeeeeeccccc
Q psy14815 104 FI-ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDEYECAAVINAHIQD 181 (479)
Q Consensus 104 ~l-~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 181 (479)
++ ++++.|+.|++||+.+++ ....+..+. .+.+++|+|+++++++++ .++.|++||+.++ +....+.. ...
T Consensus 45 ~l~~~~~~d~~i~v~d~~~~~--~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~---~~~~~~~~-~~~ 117 (391)
T 1l0q_A 45 KVYVANAHSNDVSIIDTATNN--VIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN---TVAGTVKT-GKS 117 (391)
T ss_dssp EEEEEEGGGTEEEEEETTTTE--EEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT---EEEEEEEC-SSS
T ss_pred EEEEECCCCCeEEEEECCCCe--EEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCC---eEEEEEeC-CCC
Confidence 77 667789999999999987 445555444 899999999999876554 6799999999987 34444443 456
Q ss_pred eeEEEEecCCCEE-EEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEE-EEeeCCCeEEEEeccCCCC
Q psy14815 182 VKKVRFHPFDNIL-ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL-ATCSDDATVKIWKEYKPGN 259 (479)
Q Consensus 182 v~~l~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~ 259 (479)
+.+++|+|+++.+ ++++.++.|++||+.+++. ...+..+ ..+.+++|+|+++++ ++++.++.|++||++..
T Consensus 118 ~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~----~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~-- 190 (391)
T 1l0q_A 118 PLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV----INTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN-- 190 (391)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEETTTTEE----EEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT--
T ss_pred cceEEECCCCCEEEEEeCCCCEEEEEECCCCcE----EEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCC--
Confidence 8999999999877 6777899999999987653 4444444 456999999999988 57778999999998543
Q ss_pred CCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe---CCCeEEEcccCCCCCCCCceeeEEEecccccccc
Q psy14815 260 SAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC---GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 336 (479)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~---~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~ 336 (479)
++...+.. ...+.+++|+|++++|++++ .++.|++||+.+++ ++..+ ..|.
T Consensus 191 -------------~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~---------~~~~~-~~~~- 244 (391)
T 1l0q_A 191 -------------SVIDTVKV--EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK---------ITARI-PVGP- 244 (391)
T ss_dssp -------------EEEEEEEC--SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE---------EEEEE-ECCS-
T ss_pred -------------eEEEEEec--CCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe---------EEEEE-ecCC-
Confidence 44445543 45789999999999998888 68999999998876 33333 2333
Q ss_pred ceeEEEecCCCCCCC
Q psy14815 337 DVNCVAWNPVVPEPQ 351 (479)
Q Consensus 337 ~v~~~~~sp~~~~l~ 351 (479)
.+.+++|+|++++|.
T Consensus 245 ~~~~~~~s~dg~~l~ 259 (391)
T 1l0q_A 245 DPAGIAVTPDGKKVY 259 (391)
T ss_dssp SEEEEEECTTSSEEE
T ss_pred CccEEEEccCCCEEE
Confidence 578999999999773
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.4e-27 Score=226.89 Aligned_cols=243 Identities=10% Similarity=0.076 Sum_probs=195.9
Q ss_pred cccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 6 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 6 ~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
.+.+|.+.|++++|+|+++++++++.|+.|++||+.+++.+..+
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~------------------------------------ 207 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATV------------------------------------ 207 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEE------------------------------------
T ss_pred cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEE------------------------------------
Confidence 56689999999999999999999999999999998766554332
Q ss_pred ccccCCcEEEEEECCCCCEEEEEE-CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe--------CCC
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS--------RDK 156 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~--------~dg 156 (479)
..|...+.+++|+|+++++++++ .|+.|++||+++++ ....+.. ...+.+++|+|+++.+++++ .||
T Consensus 208 -~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~--~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg 283 (433)
T 3bws_A 208 -DLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL--EIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGG 283 (433)
T ss_dssp -ECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE--EEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCE
T ss_pred -cCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc--EEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCC
Confidence 35778999999999999885554 79999999999886 4455554 45699999999999999988 488
Q ss_pred cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCE-EEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEcc
Q psy14815 157 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI-LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR 235 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 235 (479)
.|++||+++++ .... ..+...+.+++|+|+++. +++++.++.|++||+++++. ...+. +...+.+++|+|
T Consensus 284 ~i~~~d~~~~~---~~~~-~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~----~~~~~-~~~~~~~~~~s~ 354 (433)
T 3bws_A 284 RLGIYSMDKEK---LIDT-IGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKV----QKSIP-VFDKPNTIALSP 354 (433)
T ss_dssp EEEEEETTTTE---EEEE-EEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEE----EEEEE-CSSSEEEEEECT
T ss_pred eEEEEECCCCc---EEee-ccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcE----EEEec-CCCCCCeEEEcC
Confidence 99999998873 3332 245567899999999975 46668899999999986553 33333 667899999999
Q ss_pred CCCEEEEeeC---------------CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEE
Q psy14815 236 IGSRLATCSD---------------DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT 300 (479)
Q Consensus 236 ~~~~l~s~~~---------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~ 300 (479)
+++++++++. ||.|++||+.. .+.+..+.. ...+.+++|+|++++|++
T Consensus 355 dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~---------------~~~~~~~~~--~~~~~~~~~s~dg~~l~~ 417 (433)
T 3bws_A 355 DGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT---------------DTVKEFWEA--GNQPTGLDVSPDNRYLVI 417 (433)
T ss_dssp TSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT---------------TEEEEEEEC--SSSEEEEEECTTSCEEEE
T ss_pred CCCEEEEEecCCCccccccccccccceEEEEEECCC---------------CcEEEEecC--CCCCceEEEcCCCCEEEE
Confidence 9999988876 57999999843 355566665 457899999999999988
Q ss_pred EeC-CCeEEEcccCC
Q psy14815 301 ACG-DDAIRIFKENP 314 (479)
Q Consensus 301 ~~~-dg~i~vw~~~~ 314 (479)
++. |+.|++|+++.
T Consensus 418 ~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 418 SDFLDHQIRVYRRDG 432 (433)
T ss_dssp EETTTTEEEEEEETT
T ss_pred EECCCCeEEEEEecC
Confidence 875 99999999863
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-26 Score=218.28 Aligned_cols=267 Identities=13% Similarity=0.153 Sum_probs=185.9
Q ss_pred CCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEE-EEEECCCeEEEEECCCCeEEEeEE
Q psy14815 51 GLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI-ASASFDATTAVWDKRSGQFECNAT 129 (479)
Q Consensus 51 ~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l-~t~~~dg~i~iwd~~~~~~~~~~~ 129 (479)
..+++..++++.. ..+++|+.+... ... ..+...+..+++.++++.+ ++++.|++|++||+.+++ .+..
T Consensus 27 fs~dg~~la~g~~-~~~~iw~~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~--~~~~ 96 (355)
T 3vu4_A 27 FNQDQSCLILSTL-KSFEIYNVHPVA------HIM-SQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQ--DVSR 96 (355)
T ss_dssp ECTTSSEEEEECS-SEEEEEEETTEE------EEE-EEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTE--EEEE
T ss_pred ECCCCCEEEEEcC-CEEEEEecCCcc------eee-eeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCc--EEEE
Confidence 3455666665554 458899977321 111 1122357888899888877 567778999999999997 4555
Q ss_pred EeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCC-CceeeeeeeeccccceeEEEEecCCCEEEE--EEcCCcEEEE
Q psy14815 130 LEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE-DEYECAAVINAHIQDVKKVRFHPFDNILAS--ASYDDTVKLF 206 (479)
Q Consensus 130 ~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~--~~~dg~i~i~ 206 (479)
+. +...|.++.|+++. ++++ .++.|++||+.+. +... .+.. +...+++++ +++++ |+.+|.|++|
T Consensus 97 ~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~---~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iw 164 (355)
T 3vu4_A 97 IK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRIT---DDIR---FGGVCEFSN--GLLVYSNEFNLGQIHIT 164 (355)
T ss_dssp EE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSS---CCEE---EEEEEEEET--TEEEEEESSCTTCEEEE
T ss_pred EE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeE---Eecc---CCceEEEEc--cEEEEeCCCcCcEEEEE
Confidence 55 56789999998763 4444 4789999999886 3222 2222 344566776 56665 5889999999
Q ss_pred ecCCccc-----------ceEe-eeeecCCCccEEEEEEccCCCEEEEeeCCCe-EEEEeccCCCCCCCCCCCCCCCceE
Q psy14815 207 KEDKAEA-----------DWIN-FATLKSHTSTVWSLAFDRIGSRLATCSDDAT-VKIWKEYKPGNSAGIPTPDNDSVWK 273 (479)
Q Consensus 207 d~~~~~~-----------~~~~-~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~ 273 (479)
|++++.. ...+ +..+.+|...|++++|+|++++|++|+.|++ |++||++. ++
T Consensus 165 d~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~---------------~~ 229 (355)
T 3vu4_A 165 KLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTED---------------GV 229 (355)
T ss_dssp ECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTT---------------CC
T ss_pred ECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCC---------------Cc
Confidence 9986541 0012 5678899999999999999999999999998 99999853 35
Q ss_pred EEEEEe-ccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCcee---e---------E-EEecccccccccee
Q psy14815 274 CVCTLS-GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVS---F---------D-LVHTEHRAHNQDVN 339 (479)
Q Consensus 274 ~~~~~~-~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~---~---------~-~~~~~~~~h~~~v~ 339 (479)
++.++. +.|...|++++|+|++++|++++.|++|++||+........... + . ....+...+..+..
T Consensus 230 ~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (355)
T 3vu4_A 230 LVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGC 309 (355)
T ss_dssp EEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCC
T ss_pred EEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCce
Confidence 677887 53488999999999999999999999999999977542111000 0 0 00011112233446
Q ss_pred EEEecCCCCCCCccc
Q psy14815 340 CVAWNPVVPEPQKTN 354 (479)
Q Consensus 340 ~~~~sp~~~~l~~~~ 354 (479)
.++|+|+++.|+.+.
T Consensus 310 ~~a~~~d~~~l~~~~ 324 (355)
T 3vu4_A 310 KIAWISESSLVVVWP 324 (355)
T ss_dssp EEEESSSSEEEEEET
T ss_pred EEEEeCCCCEEEEEe
Confidence 789999988876664
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.6e-25 Score=217.42 Aligned_cols=309 Identities=11% Similarity=0.073 Sum_probs=225.6
Q ss_pred EECCCCCeEEEeeCCCcEEEEeccccccccccc---------CCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 18 SWNPQGTMISSCGEDKNIRLWVMVIREPYEKLH---------GLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 18 ~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
.|+|++.++++++.|++|.+||..+++.+..+. ..+++..+++.+.++.|.+||+...... .... ..
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~--~~~~--i~ 219 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPT--KVAE--IK 219 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCE--EEEE--EE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCc--EEEE--Ee
Confidence 388999999999999999999999988877665 2356778888888999999999311111 1111 12
Q ss_pred cCCcEEEEEECC----CCCEEEEEEC-CCeEEEEECCCCeEEEeEEEeC----------C-CCcEEEEEEcCCCCE-EEE
Q psy14815 89 HQRTIRETAWSP----CGNFIASASF-DATTAVWDKRSGQFECNATLEG----------H-ENEVKSVTWSKNGQF-LAT 151 (479)
Q Consensus 89 ~~~~v~~v~~~~----~~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~~----------~-~~~v~~l~~~~~~~~-l~~ 151 (479)
+...+..++|+| +|+++++++. +++|.+||..+++. +..+.. | ...+.++.++|++.. +++
T Consensus 220 ~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~--~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs 297 (543)
T 1nir_A 220 IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEP--KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVN 297 (543)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCE--EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEE
T ss_pred cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccccc--ceeecccCcccCccccccCCceEEEEECCCCCEEEEE
Confidence 456789999999 9999999985 89999999998873 444433 2 237899999997664 556
Q ss_pred EeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeeeec----CCCc
Q psy14815 152 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFATLK----SHTS 226 (479)
Q Consensus 152 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~----~~~~ 226 (479)
...++.|.+||..+.+... ...+ .+...+..+.|+|+++++++++ .+++|.+||..+++. ...+. .|.+
T Consensus 298 ~~~~g~i~vvd~~~~~~l~-~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l----~~~i~~g~~ph~g 371 (543)
T 1nir_A 298 VKETGKVLLVNYKDIDNLT-VTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRL----SALVDVGKTPHPG 371 (543)
T ss_dssp ETTTTEEEEEECTTSSSCE-EEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEE----EEEEECSSSBCCT
T ss_pred ECCCCeEEEEEecCCCcce-eEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeE----EEeeccCCCCCCC
Confidence 6678999999998764332 1222 3456688999999999876655 588999999997764 33333 2554
Q ss_pred cEEEEEEccC-CCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe--
Q psy14815 227 TVWSLAFDRI-GSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-- 302 (479)
Q Consensus 227 ~v~~~~~~~~-~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~-- 302 (479)
....+ ++|+ +..++++. .|++|.+||+...... ...++++.++.++ ...+..++|+|++++|++++
T Consensus 372 ~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~--------~~~~~~v~~l~~~-g~~~~~v~~~pdg~~l~v~~~~ 441 (543)
T 1nir_A 372 RGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHP--------QYAWKKVAELQGQ-GGGSLFIKTHPKSSHLYVDTTF 441 (543)
T ss_dssp TCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCT--------TTBTSEEEEEECS-CSCCCCEECCTTCCEEEECCTT
T ss_pred CCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCc--------hhcCeEEEEEEcC-CCCceEEEcCCCCCcEEEecCC
Confidence 44333 4677 55566665 5899999998653211 2347889999987 67788999999999999987
Q ss_pred -----CCCeEEEcccCCCCCCCCceeeEEEec----cccccccceeEEEecCCCCCCCcc
Q psy14815 303 -----GDDAIRIFKENPEAGDSDMVSFDLVHT----EHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 303 -----~dg~i~vw~~~~~~~~~~~~~~~~~~~----~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
.+++|.|||+.+.+.. ++.+.. -+..+...+..++|+|+|+.|..+
T Consensus 442 ~~~~~~~~~v~v~d~~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s 496 (543)
T 1nir_A 442 NPDARISQSVAVFDLKNLDAK-----YQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFS 496 (543)
T ss_dssp CSSHHHHTCEEEEETTCTTSC-----CEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEE
T ss_pred CCCcccCceEEEEECCCCCCC-----eEEeechhhcccCCCCCceEeccCCCCCCEEEEE
Confidence 2779999999988721 111100 013456789999999999988654
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.5e-25 Score=228.80 Aligned_cols=303 Identities=12% Similarity=0.054 Sum_probs=213.7
Q ss_pred ccceEEEEECCCCCeEEEeeC-CC-----cEEEEecccccccccc----------------------------------c
Q psy14815 11 QGRVWNVSWNPQGTMISSCGE-DK-----NIRLWVMVIREPYEKL----------------------------------H 50 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~-dg-----~v~iwd~~~~~~~~~~----------------------------------~ 50 (479)
...|++++|||||++|++++. |+ +|++||+.+++....+ .
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457999999999999999998 88 8999999887653322 1
Q ss_pred CCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEE
Q psy14815 51 GLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL 130 (479)
Q Consensus 51 ~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~ 130 (479)
..+++..++.... +.+.+|++...... .......+...+.+++|+|||++|++++. +.|++||+.+++.. ...
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~---~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~--~~~ 188 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKA---AVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQM--QLT 188 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTT---SCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEE--ECC
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcc---eEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEE--Eec
Confidence 2345555665554 89999999853100 11123456788999999999999999884 69999999988633 222
Q ss_pred eCCCCc----------------EEEEEEcCCCCEEEEEeCCC---------------------------------cEEEE
Q psy14815 131 EGHENE----------------VKSVTWSKNGQFLATCSRDK---------------------------------SVWVW 161 (479)
Q Consensus 131 ~~~~~~----------------v~~l~~~~~~~~l~~~~~dg---------------------------------~i~vw 161 (479)
..+... +.++.|+|||++|++++.|+ .|.+|
T Consensus 189 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~ 268 (741)
T 2ecf_A 189 ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVI 268 (741)
T ss_dssp CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEE
T ss_pred cCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEE
Confidence 222222 47899999999999998765 78889
Q ss_pred EeCC-CCceeeeeeeeccccceeEEEEecCCCEEEEEEc-----CCcEEEEecCCcccceEeeeeecCCCc----cEEEE
Q psy14815 162 EVGE-EDEYECAAVINAHIQDVKKVRFHPFDNILASASY-----DDTVKLFKEDKAEADWINFATLKSHTS----TVWSL 231 (479)
Q Consensus 162 d~~~-~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~~~~~----~v~~~ 231 (479)
|+.+ ++.. .+.....|...+..++| |+|+.|++++. +..|++||+.+++. ...+..+.. .+..+
T Consensus 269 d~~~~~~~~-~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~----~~~~~~~~~~~~~~~~~~ 342 (741)
T 2ecf_A 269 SPAEQAQTQ-WIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQ----RVLAHETSPTWVPLHNSL 342 (741)
T ss_dssp CSSTTCCCE-EECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCE----EEEEEEECSSCCCCCSCC
T ss_pred ECCCCCceE-EecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCce----EEEEEcCCCCcCCcCCce
Confidence 9887 6421 11111246778999999 99999998764 56799999987764 222222222 34678
Q ss_pred EEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEE-EecCCCCeEEE-EeCCC--eE
Q psy14815 232 AFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI-SWCHLTDLIAT-ACGDD--AI 307 (479)
Q Consensus 232 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l-~~~~~~~~l~~-~~~dg--~i 307 (479)
+|+|+|+++++++.||.++||.+.... . ...+..+ ...+..+ .|+|+++.|+. ++.++ .+
T Consensus 343 ~~spdg~~~~~~~~~g~~~l~~~~~~~--------------~-~~~l~~~-~~~v~~~~~~s~dg~~l~~~~~~~~~~~~ 406 (741)
T 2ecf_A 343 RFLDDGSILWSSERTGFQHLYRIDSKG--------------K-AAALTHG-NWSVDELLAVDEKAGLAYFRAGIESARES 406 (741)
T ss_dssp EECTTSCEEEEECTTSSCEEEEECSSS--------------C-EEESCCS-SSCEEEEEEEETTTTEEEEEECSSCTTCB
T ss_pred EECCCCeEEEEecCCCccEEEEEcCCC--------------C-eeeeeec-ceEEEeEeEEeCCCCEEEEEEeCCCCceE
Confidence 999999999999999988888874221 2 3455554 5667777 59999987754 44455 89
Q ss_pred EEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCc
Q psy14815 308 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 308 ~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~ 352 (479)
++|++..... ....+ .. ...+.+++||||+++|+.
T Consensus 407 ~l~~~~~~g~--------~~~~l-~~-~~~~~~~~~spdg~~l~~ 441 (741)
T 2ecf_A 407 QIYAVPLQGG--------QPQRL-SK-APGMHSASFARNASVYVD 441 (741)
T ss_dssp EEEEEETTCC--------CCEEC-CC-SCSEEEEEECTTSSEEEE
T ss_pred EEEEEEcCCC--------Ceeec-cc-CCCceEEEECCCCCEEEE
Confidence 9999865221 12222 12 456789999999998844
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.7e-25 Score=200.35 Aligned_cols=235 Identities=11% Similarity=0.088 Sum_probs=174.1
Q ss_pred ccCCcEEEEEECCCCCEEEEEECCCeEEEEECCC-CeEEEeEEEeCC-CCcEEEEEEcCCCCEEEEEe--CCCcEEEEEe
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRS-GQFECNATLEGH-ENEVKSVTWSKNGQFLATCS--RDKSVWVWEV 163 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~-~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~~~~--~dg~i~vwd~ 163 (479)
.|...|.+++|+|++++|++++ ++.|.+||+.+ ++. ......+ ...+.+++|+|++++|++++ .++...+|.+
T Consensus 39 ~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~ 115 (297)
T 2ojh_A 39 QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSP--EKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLL 115 (297)
T ss_dssp EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSC--EECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEE
T ss_pred cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCc--eEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEE
Confidence 4678999999999999999987 78999999998 763 3333444 36788999999999999998 4456666666
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEE-EEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILA-SASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
+... .....+..+ ..+..++|+|+++.|+ +++.++.+++|+++.... ....+..+...+.+++|+|++++|+.
T Consensus 116 ~~~~--~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~s~dg~~l~~ 189 (297)
T 2ojh_A 116 PSTG--GTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG---VETRLTHGEGRNDGPDYSPDGRWIYF 189 (297)
T ss_dssp ETTC--CCCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC---CEEECCCSSSCEEEEEECTTSSEEEE
T ss_pred ECCC--CceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCC---cceEcccCCCccccceECCCCCEEEE
Confidence 4321 112233333 3488899999999877 778899999999754322 13456677888999999999998877
Q ss_pred ee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC-----------CeEEEc
Q psy14815 243 CS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD-----------DAIRIF 310 (479)
Q Consensus 243 ~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d-----------g~i~vw 310 (479)
++ .++.+++|++..... ....+..+ ...+..++|+|++++|++++.+ +.|++|
T Consensus 190 ~~~~~~~~~i~~~~~~~~--------------~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~ 254 (297)
T 2ojh_A 190 NSSRTGQMQIWRVRVDGS--------------SVERITDS-AYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLM 254 (297)
T ss_dssp EECTTSSCEEEEEETTSS--------------CEEECCCC-SEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEE
T ss_pred EecCCCCccEEEECCCCC--------------CcEEEecC-CcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEE
Confidence 66 589999999853221 13444554 5688999999999999888776 569999
Q ss_pred ccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 311 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
|+.+++. ..+. ...+|...+.+++|+|++++|+...
T Consensus 255 d~~~~~~-------~~~~-~~~~~~~~~~~~~~spdg~~l~~~~ 290 (297)
T 2ojh_A 255 DMDGGNV-------ETLF-DLFGGQGTMNSPNWSPDGDEFAYVR 290 (297)
T ss_dssp ETTSCSC-------EEEE-EEEESTTTSCSCCBCTTSSEEEEEE
T ss_pred ecCCCCc-------eeee-ccCCCCcccccceECCCCCEEEEEE
Confidence 9988751 0111 1236778899999999999886543
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-23 Score=195.61 Aligned_cols=283 Identities=11% Similarity=0.083 Sum_probs=190.9
Q ss_pred ccccceEEEEECCCCCeEEEeeCC-CcEEEEecc--cccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGED-KNIRLWVMV--IREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~d-g~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
.|...+.+++|+|+|++|++++.+ +.|++|++. +++.. .....
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~----------------------------------~~~~~ 80 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALT----------------------------------FAAES 80 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE----------------------------------EEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCcee----------------------------------ecccc
Confidence 467789999999999999888876 899999986 22211 00000
Q ss_pred ccccCCcEEEEEECCCCCEEEEEEC-CCeEEEEECCCCeE-EEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEE
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASF-DATTAVWDKRSGQF-ECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWE 162 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~-dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vwd 162 (479)
.. ...+..++|+|+++++++++. ++.|.+||+..+.. .....+.. ...+.+++|+|+++++++++ .++.|.+||
T Consensus 81 -~~-~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d 157 (343)
T 1ri6_A 81 -AL-PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFT 157 (343)
T ss_dssp -EC-SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEE
T ss_pred -cc-CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEE
Confidence 11 237789999999998877765 88999999954321 23344443 34688999999999888887 899999999
Q ss_pred eCCCCceeeee--eeec-cccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeee---ecC---CCccEEEEE
Q psy14815 163 VGEEDEYECAA--VINA-HIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFAT---LKS---HTSTVWSLA 232 (479)
Q Consensus 163 ~~~~~~~~~~~--~~~~-~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~---~~~---~~~~v~~~~ 232 (479)
+.......... .... ....+.+++|+|+++++++++ .++.|.+|+++........... +.. ....+..++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ 237 (343)
T 1ri6_A 158 VSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIH 237 (343)
T ss_dssp ECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEE
T ss_pred ecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceE
Confidence 98733222222 2222 334688999999999776655 7899999999642211121222 211 134677899
Q ss_pred EccCCCEEEE-eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe-CCCeEEEc
Q psy14815 233 FDRIGSRLAT-CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIF 310 (479)
Q Consensus 233 ~~~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~-~dg~i~vw 310 (479)
|+|++++|++ +..++.|.+||+.... ...+.+..+..+ . .+.+++|+|++++|++++ .++.|.+|
T Consensus 238 ~s~dg~~l~v~~~~~~~i~v~d~~~~~-----------~~~~~~~~~~~~-~-~~~~~~~s~dg~~l~~~~~~~~~v~v~ 304 (343)
T 1ri6_A 238 ITPDGRHLYACDRTASLITVFSVSEDG-----------SVLSKEGFQPTE-T-QPRGFNVDHSGKYLIAAGQKSHHISVY 304 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTS-----------CCEEEEEEEECS-S-SCCCEEECTTSSEEEEECTTTCEEEEE
T ss_pred ECCCCCEEEEEecCCCEEEEEEEcCCC-----------CceEEeeeecCC-C-ccceEEECCCCCEEEEecCCCCeEEEE
Confidence 9999998874 4578999999985321 123445555543 3 388999999999888887 58999999
Q ss_pred ccC--CCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 311 KEN--PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 311 ~~~--~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
+++ +++ +..+..+.. .....+++|.|+...+
T Consensus 305 ~~d~~~g~-------~~~~~~~~~--g~~p~~i~~~~~~~~~ 337 (343)
T 1ri6_A 305 EIVGEQGL-------LHEKGRYAV--GQGPMWVVVNAHEGGS 337 (343)
T ss_dssp EEETTTTE-------EEEEEEEEC--SSSCCEEEEEEEC---
T ss_pred EEcCCCce-------eeEcccccc--CCCCeeEEEEcccCCc
Confidence 665 432 112222211 2457788998876543
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.6e-23 Score=195.63 Aligned_cols=272 Identities=8% Similarity=0.047 Sum_probs=197.4
Q ss_pred cccceEEEEECCCCCeEEEeeC-------CCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGE-------DKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~-------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
....+..++|+|+++++++++. ++.|.+||..+++.+..+.
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-------------------------------- 86 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH-------------------------------- 86 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE--------------------------------
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe--------------------------------
Confidence 3467889999999998888774 5679999987766544331
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEE-ECCCeEEEEECCCCeEEEeEEEeCCCC---------cEEEEEEcCCCCEEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASA-SFDATTAVWDKRSGQFECNATLEGHEN---------EVKSVTWSKNGQFLATC 152 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~~~~~~---------~v~~l~~~~~~~~l~~~ 152 (479)
....+..++|+|++++++++ ..++.|.+||..+++. ...+..+.. .+.++.|+|++++++++
T Consensus 87 ------~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 158 (353)
T 3vgz_A 87 ------NDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEV--KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYIS 158 (353)
T ss_dssp ------ESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCE--EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEE
T ss_pred ------cCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCee--EEEEecCCCccccccCCCCCceEEECCCCCEEEEE
Confidence 12346678999999866555 5579999999999873 344443322 27899999999988877
Q ss_pred e--CCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEE
Q psy14815 153 S--RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWS 230 (479)
Q Consensus 153 ~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~ 230 (479)
+ .++.|.+||..+. +....+..+...+.+++|+|+++++++++.++.|.+||..+++..........++...+..
T Consensus 159 ~~~~~~~i~~~d~~~~---~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 235 (353)
T 3vgz_A 159 GIGKESVIWVVDGGNI---KLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFIN 235 (353)
T ss_dssp EESSSCEEEEEETTTT---EEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEE
T ss_pred ecCCCceEEEEcCCCC---ceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccce
Confidence 6 4788999999887 4444554455568899999999999999999999999998766421111111235667889
Q ss_pred EEEccCCCEEEEeeC-CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe-CCCeEE
Q psy14815 231 LAFDRIGSRLATCSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIR 308 (479)
Q Consensus 231 ~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~-~dg~i~ 308 (479)
++|+|+++++++++. ++.|.+||.... +.+..+... . ...++|+|+++++++++ .++.|.
T Consensus 236 ~~~s~dg~~l~~~~~~~~~v~~~d~~~~---------------~~~~~~~~~-~--~~~~~~s~dg~~l~v~~~~~~~v~ 297 (353)
T 3vgz_A 236 ISLDTARQRAFITDSKAAEVLVVDTRNG---------------NILAKVAAP-E--SLAVLFNPARNEAYVTHRQAGKVS 297 (353)
T ss_dssp EEEETTTTEEEEEESSSSEEEEEETTTC---------------CEEEEEECS-S--CCCEEEETTTTEEEEEETTTTEEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEECCCC---------------cEEEEEEcC-C--CceEEECCCCCEEEEEECCCCeEE
Confidence 999999998776664 489999998443 334444433 1 25699999999665555 689999
Q ss_pred EcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 309 IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 309 vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
+||..+++ .+..+. ....+.+++|+||+++|...
T Consensus 298 ~~d~~~~~---------~~~~~~--~~~~~~~~~~s~dg~~l~v~ 331 (353)
T 3vgz_A 298 VIDAKSYK---------VVKTFD--TPTHPNSLALSADGKTLYVS 331 (353)
T ss_dssp EEETTTTE---------EEEEEE--CCSEEEEEEECTTSCEEEEE
T ss_pred EEECCCCe---------EEEEEe--cCCCCCeEEEcCCCCEEEEE
Confidence 99998876 333332 23467899999999977544
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-23 Score=200.95 Aligned_cols=226 Identities=14% Similarity=0.142 Sum_probs=178.0
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCC---cEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCce
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDK---NIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKF 79 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~ 79 (479)
..+.+.+|...|.+++|+|||++|++++.++ .|++||+.+++...
T Consensus 170 ~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~-------------------------------- 217 (415)
T 2hqs_A 170 NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-------------------------------- 217 (415)
T ss_dssp SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE--------------------------------
T ss_pred CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE--------------------------------
Confidence 3567788999999999999999999999875 89999987665421
Q ss_pred eeeEEeccccCCcEEEEEECCCCCEEE-EEECCC--eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-C
Q psy14815 80 TAKAILSDGHQRTIRETAWSPCGNFIA-SASFDA--TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-D 155 (479)
Q Consensus 80 ~~~~~~~~~~~~~v~~v~~~~~~~~l~-t~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-d 155 (479)
...|...+.+++|+|+|++|+ +++.++ .|++||+.+++. ..+..|...+.+++|+|||+.|++++. +
T Consensus 218 ------l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~spdg~~l~~~s~~~ 288 (415)
T 2hqs_A 218 ------VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI---RQVTDGRSNNTEPTWFPDSQNLAFTSDQA 288 (415)
T ss_dssp ------EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE---EECCCCSSCEEEEEECTTSSEEEEEECTT
T ss_pred ------eecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE---EeCcCCCCcccceEECCCCCEEEEEECCC
Confidence 134667899999999999888 566555 499999998863 466678889999999999999988886 4
Q ss_pred C--cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcC---CcEEEEecCCcccceEeeeeecCCCccEEE
Q psy14815 156 K--SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD---DTVKLFKEDKAEADWINFATLKSHTSTVWS 230 (479)
Q Consensus 156 g--~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~ 230 (479)
+ .|.+||+.+++ ...+..+...+.+++|+|+|++|++++.+ ..|.+||+.+++. ..+..+. .+.+
T Consensus 289 g~~~i~~~d~~~~~----~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-----~~l~~~~-~~~~ 358 (415)
T 2hqs_A 289 GRPQVYKVNINGGA----PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-----QVLSSTF-LDET 358 (415)
T ss_dssp SSCEEEEEETTSSC----CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-----EECCCSS-SCEE
T ss_pred CCcEEEEEECCCCC----EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-----EEecCCC-CcCC
Confidence 5 57777887753 22344566778999999999999988864 5899999987653 3344454 8899
Q ss_pred EEEccCCCEEEEeeCCC---eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC
Q psy14815 231 LAFDRIGSRLATCSDDA---TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 296 (479)
Q Consensus 231 ~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~ 296 (479)
++|+|+|++|++++.++ .|++||+.. .....+..+ ...|.+++|+|...
T Consensus 359 ~~~spdg~~l~~~s~~~~~~~l~~~d~~g----------------~~~~~l~~~-~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 359 PSLAPNGTMVIYSSSQGMGSVLNLVSTDG----------------RFKARLPAT-DGQVKFPAWSPYLH 410 (415)
T ss_dssp EEECTTSSEEEEEEEETTEEEEEEEETTS----------------CCEEECCCS-SSEEEEEEECCCCC
T ss_pred eEEcCCCCEEEEEEcCCCccEEEEEECCC----------------CcEEEeeCC-CCCCcCCccccccc
Confidence 99999999999888776 799999742 224566665 77999999999654
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.7e-23 Score=204.88 Aligned_cols=295 Identities=11% Similarity=0.098 Sum_probs=210.8
Q ss_pred cccccc-ccccceEEEEECCCCCeEEEeeCCCcEEEEec--ccccccccccC---------CC----ccceEEEee-cCC
Q psy14815 3 NSQTLK-GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVM--VIREPYEKLHG---------LP----VETSLRQLV-EDK 65 (479)
Q Consensus 3 ~~~~l~-~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~--~~~~~~~~~~~---------~~----~~~~~~~~~-~~~ 65 (479)
+++++. +|. +.+++|+|||++|++++.|++|++||+ .+++.+..+.. .+ ++..++++. .++
T Consensus 171 ~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~ 248 (543)
T 1nir_A 171 IVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPP 248 (543)
T ss_dssp EEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESS
T ss_pred EEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCC
Confidence 345666 443 899999999999999999999999999 77776665542 35 666666665 479
Q ss_pred cEEEecCCCCCCceeeeEEe--cc---cc-CCcEEEEEECCCCCE-EEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEE
Q psy14815 66 NIRLWGKESFGNKFTAKAIL--SD---GH-QRTIRETAWSPCGNF-IASASFDATTAVWDKRSGQFECNATLEGHENEVK 138 (479)
Q Consensus 66 ~i~~w~~~~~~~~~~~~~~~--~~---~~-~~~v~~v~~~~~~~~-l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~ 138 (479)
++.+||..+..........- .. .| ...+.++.++|++.. +++...++.|.+||+.+.+......+. +...+.
T Consensus 249 ~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~ 327 (543)
T 1nir_A 249 QFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLH 327 (543)
T ss_dssp EEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCC
T ss_pred eEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCcc
Confidence 99999987432211111000 00 02 237999999997654 566677899999999886533333444 566788
Q ss_pred EEEEcCCCCEEEEEe-CCCcEEEEEeCCCCceeeeeeeec----cccceeEEEEecC-CCEEEEEE-cCCcEEEEecCCc
Q psy14815 139 SVTWSKNGQFLATCS-RDKSVWVWEVGEEDEYECAAVINA----HIQDVKKVRFHPF-DNILASAS-YDDTVKLFKEDKA 211 (479)
Q Consensus 139 ~l~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~----~~~~v~~l~~~~~-~~~l~~~~-~dg~i~i~d~~~~ 211 (479)
++.|+|+++++++++ .+++|.+||..++ ++...+.. |......+ ++|+ +..++++. .|++|.+||..+.
T Consensus 328 ~~~~spdg~~l~va~~~~~~v~v~D~~tg---~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~ 403 (543)
T 1nir_A 328 DGGWDSSHRYFMTAANNSNKVAVIDSKDR---RLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPK 403 (543)
T ss_dssp CEEECTTSCEEEEEEGGGTEEEEEETTTT---EEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTT
T ss_pred CceECCCCCEEEEEecCCCeEEEEECCCC---eEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCC
Confidence 999999999877665 5889999999987 34444432 44333333 4676 56666665 5799999999862
Q ss_pred c---cceEeeeeecCCCccEEEEEEccCCCEEEEee-------CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEE----
Q psy14815 212 E---ADWINFATLKSHTSTVWSLAFDRIGSRLATCS-------DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT---- 277 (479)
Q Consensus 212 ~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---- 277 (479)
. ..++.+.++..|...+..++++|++++|++++ .+++|.+||+.+..... +.+..
T Consensus 404 ~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~-----------~~~~v~~~~ 472 (543)
T 1nir_A 404 NHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKY-----------QVLPIAEWA 472 (543)
T ss_dssp TCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCC-----------EEECHHHHH
T ss_pred CCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCe-----------EEeechhhc
Confidence 2 12567888999988889999999999999987 26799999997654321 11100
Q ss_pred -EeccccccEEEEEecCCCCeEEEEe-----CCCeEEEcccCCCC
Q psy14815 278 -LSGHHGRTIYDISWCHLTDLIATAC-----GDDAIRIFKENPEA 316 (479)
Q Consensus 278 -~~~~~~~~i~~l~~~~~~~~l~~~~-----~dg~i~vw~~~~~~ 316 (479)
+..+ ...+..++|+|+|+.+.++. .|+.|.|||.++++
T Consensus 473 ~~~~~-~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 473 DLGEG-AKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp CCCSS-CCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred ccCCC-CCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence 1222 66899999999999888763 37999999999987
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=224.86 Aligned_cols=271 Identities=10% Similarity=0.079 Sum_probs=186.8
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR 91 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 91 (479)
..+.+++|+|||+++++ +.||+|++||+.+++....+ ..|..
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~-------------------------------------~~~~~ 58 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLI-------------------------------------EGKKI 58 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEE-------------------------------------CTTTT
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEe-------------------------------------ccccc
Confidence 34788999999998876 68999999999887654332 22322
Q ss_pred ---cEEEEEECCCCCEEEEEECC---------CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy14815 92 ---TIRETAWSPCGNFIASASFD---------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 159 (479)
Q Consensus 92 ---~v~~v~~~~~~~~l~t~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~ 159 (479)
.|.+++|||||++|++++.+ +.+.+||+.+++...+.....|...+.+++|+|||+.|+.++. +.|+
T Consensus 59 ~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~ 137 (723)
T 1xfd_A 59 ESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIY 137 (723)
T ss_dssp TTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEE
T ss_pred cccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEE
Confidence 48999999999999999874 7888999999864333333345556889999999999999876 7999
Q ss_pred EEEeCCCCceeeeeeeeccccc------------------eeEEEEecCCCEEEEEEcCC--------------------
Q psy14815 160 VWEVGEEDEYECAAVINAHIQD------------------VKKVRFHPFDNILASASYDD-------------------- 201 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~~~~~------------------v~~l~~~~~~~~l~~~~~dg-------------------- 201 (479)
+||+.+++. ......+... +.+++|+|+|+.|++++.++
T Consensus 138 ~~~~~~g~~---~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (723)
T 1xfd_A 138 YCAHVGKQA---IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVK 214 (723)
T ss_dssp EESSSSSCC---EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCE
T ss_pred EEECCCCce---EEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcce
Confidence 999988643 2222222222 37899999999999987653
Q ss_pred --------------cEEEEecCCcccceEeeeeecC------CCccEEEEEEccCCCEEEEeeC----CCeEEEEeccCC
Q psy14815 202 --------------TVKLFKEDKAEADWINFATLKS------HTSTVWSLAFDRIGSRLATCSD----DATVKIWKEYKP 257 (479)
Q Consensus 202 --------------~i~i~d~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~ 257 (479)
.|++||+.+++. ...+.. +...+..++|+|||+++++.+. +..|++||+..+
T Consensus 215 ~~~~~~~G~~~~~~~l~~~d~~~~~~----~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g 290 (723)
T 1xfd_A 215 PYHYPKAGSENPSISLHVIGLNGPTH----DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG 290 (723)
T ss_dssp EEECCBTTSCCCEEEEEEEESSSSCC----CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC
T ss_pred eccCCCCCCCCCeeEEEEEECCCCce----eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC
Confidence 789999987653 223333 3678999999999998876643 357999998443
Q ss_pred CCCCCCCCCCCCCceEEEEEEeccccccE----EEEEecCCCCeEEE--EeCCC------eEEEccc-CCCCCCCCceee
Q psy14815 258 GNSAGIPTPDNDSVWKCVCTLSGHHGRTI----YDISWCHLTDLIAT--ACGDD------AIRIFKE-NPEAGDSDMVSF 324 (479)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----~~l~~~~~~~~l~~--~~~dg------~i~vw~~-~~~~~~~~~~~~ 324 (479)
++...+..++...+ ..++|+|||+.|+. +..++ .|++||. ..+...
T Consensus 291 ---------------~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~------ 349 (723)
T 1xfd_A 291 ---------------VCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSND------ 349 (723)
T ss_dssp ---------------CEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSC------
T ss_pred ---------------cceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCcc------
Confidence 22333333223333 37899999997775 44566 4666663 332200
Q ss_pred EEEecccccccccee-EEEecCCCCCCC
Q psy14815 325 DLVHTEHRAHNQDVN-CVAWNPVVPEPQ 351 (479)
Q Consensus 325 ~~~~~~~~~h~~~v~-~~~~sp~~~~l~ 351 (479)
+...+. .+...+. .++|||||+.|+
T Consensus 350 -~~~~l~-~~~~~~~~~~~~spdg~~l~ 375 (723)
T 1xfd_A 350 -NIQSIT-SGDWDVTKILAYDEKGNKIY 375 (723)
T ss_dssp -CCCBSC-CSSSCEEEEEEEETTTTEEE
T ss_pred -ceeEee-cCCeEEEeeeEEcCCCCEEE
Confidence 011222 2223344 469999999884
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.92 E-value=9.9e-23 Score=190.68 Aligned_cols=245 Identities=12% Similarity=0.112 Sum_probs=170.3
Q ss_pred ccCCcEEEEEECCCCCEEEEEECC-CeEEEEECC--CCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-CCcEEEEEe
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFD-ATTAVWDKR--SGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DKSVWVWEV 163 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~d-g~i~iwd~~--~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~i~vwd~ 163 (479)
.+...+.+++|+|++++|++++.+ +.|.+|++. +++...+..+..+. .+.+++|+|+++++++++. ++.|.+||+
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence 456788899999999999999887 999999997 66655556666544 7889999999998877765 788999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCC-cccceEeee--eec-CCCccEEEEEEccCCC
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDK-AEADWINFA--TLK-SHTSTVWSLAFDRIGS 238 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~-~~~~~~~~~--~~~-~~~~~v~~~~~~~~~~ 238 (479)
..+........+.. ...+.+++|+|+++++++++ .++.|.+||+.. +.. .... ... .....+..++|+|+++
T Consensus 114 ~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~pdg~ 190 (343)
T 1ri6_A 114 EDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL--VAQDPAEVTTVEGAGPRHMVFHPNEQ 190 (343)
T ss_dssp ETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE--EEEEEEEEECSTTCCEEEEEECTTSS
T ss_pred CCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce--eeecccccccCCCCCcceEEECCCCC
Confidence 63322233333333 34588999999999888887 899999999986 432 1111 222 2345788999999999
Q ss_pred EEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEe---cc--ccccEEEEEecCCCCeEEEE-eCCCeEEEcc
Q psy14815 239 RLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS---GH--HGRTIYDISWCHLTDLIATA-CGDDAIRIFK 311 (479)
Q Consensus 239 ~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~i~~l~~~~~~~~l~~~-~~dg~i~vw~ 311 (479)
++++++ .++.|.+|++..... ......... .. ....+..++|+|++++|+++ ..++.|++|+
T Consensus 191 ~l~~~~~~~~~i~~~~~~~~~g-----------~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d 259 (343)
T 1ri6_A 191 YAYCVNELNSSVDVWELKDPHG-----------NIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFS 259 (343)
T ss_dssp EEEEEETTTTEEEEEESSCTTS-----------CCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EEEEEeCCCCEEEEEEecCCCC-----------cEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEE
Confidence 776554 789999999853211 111122222 11 12357789999999887754 4789999999
Q ss_pred cCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 312 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+..... ....+... ..+. .+.+++|+|++++|....
T Consensus 260 ~~~~~~-----~~~~~~~~-~~~~-~~~~~~~s~dg~~l~~~~ 295 (343)
T 1ri6_A 260 VSEDGS-----VLSKEGFQ-PTET-QPRGFNVDHSGKYLIAAG 295 (343)
T ss_dssp ECTTSC-----CEEEEEEE-ECSS-SCCCEEECTTSSEEEEEC
T ss_pred EcCCCC-----ceEEeeee-cCCC-ccceEEECCCCCEEEEec
Confidence 984211 01122222 1223 388999999999775543
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.92 E-value=3e-23 Score=189.68 Aligned_cols=241 Identities=11% Similarity=0.088 Sum_probs=180.0
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCCCcEEEEeccc-ccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVI-REPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
..+..|...|.+++|+|+|++|++++ ++.|.+||+.+ ++......
T Consensus 35 ~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~--------------------------------- 80 (297)
T 2ojh_A 35 RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDT--------------------------------- 80 (297)
T ss_dssp EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCC---------------------------------
T ss_pred eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecc---------------------------------
Confidence 34567899999999999999999987 78999999877 55432220
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEEC--C--CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEE-EEeCCCcE
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASF--D--ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSV 158 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~--d--g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~i 158 (479)
..+...+.+++|+|++++|++++. + ..|..|+..+++ ...+..+ ..+.+++|+|+++.|+ +++.++.+
T Consensus 81 ---~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~ 153 (297)
T 2ojh_A 81 ---GFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT---PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVF 153 (297)
T ss_dssp ---TTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC---CEECCSS-SSEEEEEECTTSSEEEEEEEETTEE
T ss_pred ---ccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc---eEEeecC-CCccceEECCCCCEEEEEECCCCce
Confidence 122467888999999999999993 3 355555556554 3344433 3589999999999877 77889999
Q ss_pred EEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC
Q psy14815 159 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG 237 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 237 (479)
++|+++... .....+..+...+.+++|+|+++.|++++ .++.+++|+++.... ....+..|...+.+++|+|++
T Consensus 154 ~l~~~~~~~--~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~s~dg 228 (297)
T 2ojh_A 154 DIYSMDIDS--GVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS---SVERITDSAYGDWFPHPSPSG 228 (297)
T ss_dssp EEEEEETTT--CCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS---CEEECCCCSEEEEEEEECTTS
T ss_pred EEEEEECCC--CcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCC---CcEEEecCCcccCCeEECCCC
Confidence 999975432 22344556778899999999999888766 589999999863222 245667788889999999999
Q ss_pred CEEEEeeCC-----------CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCC
Q psy14815 238 SRLATCSDD-----------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD 305 (479)
Q Consensus 238 ~~l~s~~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg 305 (479)
++|++++.+ +.|++||+..... ..+..+.++ ...+.+++|+|++++|++++.+.
T Consensus 229 ~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-------------~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 229 DKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV-------------ETLFDLFGG-QGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp SEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC-------------EEEEEEEES-TTTSCSCCBCTTSSEEEEEEECC
T ss_pred CEEEEEEcCCCCCcccccCceEEEEEecCCCCc-------------eeeeccCCC-CcccccceECCCCCEEEEEEecc
Confidence 999888765 5699999854322 334444454 66889999999999998887764
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-22 Score=188.57 Aligned_cols=256 Identities=11% Similarity=0.142 Sum_probs=175.3
Q ss_pred ccccceEEEEECCCCCeEEEeeC---CCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGE---DKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
.+...+..++|+|+|+ |++++. ++.|.+|++.+++... + ..
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~-~----------------------------------~~ 80 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHK-L----------------------------------NT 80 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEE-E----------------------------------EE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEE-e----------------------------------ee
Confidence 4556778899999998 555443 6889999885443210 0 00
Q ss_pred ccccCCcEEEEEECCCCCEEEEEE-CCCeEEEEECC-CCeEEEeEEEeCC---------CCcEEEEEEcCCCCEEEEEeC
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASAS-FDATTAVWDKR-SGQFECNATLEGH---------ENEVKSVTWSKNGQFLATCSR 154 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~-~~~~~~~~~~~~~---------~~~v~~l~~~~~~~~l~~~~~ 154 (479)
...+...+..++|+|++++|++++ .++.|.+|++. ++....+..+... ...+.+++|+|+|+.+++...
T Consensus 81 ~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~ 160 (347)
T 3hfq_A 81 VVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG 160 (347)
T ss_dssp EEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT
T ss_pred eecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC
Confidence 123566788999999999998888 67999999995 4443344444321 234889999999996666666
Q ss_pred CCcEEEEEeCCCCceeeeeeeec-cccceeEEEEecCCCEEEE-EEcCCcEEEEecCCcccceEeeeeecCCC------c
Q psy14815 155 DKSVWVWEVGEEDEYECAAVINA-HIQDVKKVRFHPFDNILAS-ASYDDTVKLFKEDKAEADWINFATLKSHT------S 226 (479)
Q Consensus 155 dg~i~vwd~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~------~ 226 (479)
++.|.+|++...........+.. .......++|+|+|+++++ +..++.|.+|+++...........+.... .
T Consensus 161 ~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (347)
T 3hfq_A 161 SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHN 240 (347)
T ss_dssp TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCC
T ss_pred CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCC
Confidence 88999999984332232222222 2335778999999996666 45678999999875322222233332222 4
Q ss_pred cEEEEEEccCCCEE-EEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC-
Q psy14815 227 TVWSLAFDRIGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD- 304 (479)
Q Consensus 227 ~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d- 304 (479)
.+..++|+|+|++| ++...++.|.+|++.... ....+..+..+ ...+..++|+|++++|++++.+
T Consensus 241 ~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g------------~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~ 307 (347)
T 3hfq_A 241 GAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG------------HLTLIQQISTE-GDFPRDFDLDPTEAFVVVVNQNT 307 (347)
T ss_dssp EEEEEEECTTSCEEEEEEETTTEEEEEEECGGG------------CEEEEEEEECS-SSCCCEEEECTTSSEEEEEETTT
T ss_pred cceeEEECCCCCEEEEEeCCCCEEEEEEECCCC------------cEEEeEEEecC-CCCcCeEEECCCCCEEEEEEcCC
Confidence 58899999999987 455668999999985321 22445555554 5568899999999988888764
Q ss_pred CeEEEcccC
Q psy14815 305 DAIRIFKEN 313 (479)
Q Consensus 305 g~i~vw~~~ 313 (479)
+.|.+|+++
T Consensus 308 ~~v~v~~~d 316 (347)
T 3hfq_A 308 DNATLYARD 316 (347)
T ss_dssp TEEEEEEEC
T ss_pred CcEEEEEEe
Confidence 899999554
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.8e-23 Score=221.72 Aligned_cols=303 Identities=10% Similarity=0.057 Sum_probs=218.9
Q ss_pred cccccccccce-------EEEEECCCCCeEEEeeCC------CcEEEEecccccccccccCC------------------
Q psy14815 4 SQTLKGHQGRV-------WNVSWNPQGTMISSCGED------KNIRLWVMVIREPYEKLHGL------------------ 52 (479)
Q Consensus 4 ~~~l~~h~~~V-------~~l~~s~~~~~l~t~~~d------g~v~iwd~~~~~~~~~~~~~------------------ 52 (479)
.+.|.+|...+ .+++|+|||+++++++.+ ..|.+|++.+++........
T Consensus 92 ~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~ 171 (1045)
T 1k32_A 92 IKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTF 171 (1045)
T ss_dssp EEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCS
T ss_pred eEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCC
Confidence 45678888888 999999999977777754 35777777665532111000
Q ss_pred -------------------C---------------------ccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCc
Q psy14815 53 -------------------P---------------------VETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRT 92 (479)
Q Consensus 53 -------------------~---------------------~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 92 (479)
+ .+..++....++...+|.++..+.... ....|. .
T Consensus 172 ~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~----~l~~~~-~ 246 (1045)
T 1k32_A 172 ELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLR----KHTSFT-D 246 (1045)
T ss_dssp CCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCE----ECCCCC-S
T ss_pred CccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcce----EecCCC-C
Confidence 0 011222334456777776553222111 112233 4
Q ss_pred EEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC-----------CCCcEEEEEEc-CCCCEEEEEeCCCcEEE
Q psy14815 93 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG-----------HENEVKSVTWS-KNGQFLATCSRDKSVWV 160 (479)
Q Consensus 93 v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~-----------~~~~v~~l~~~-~~~~~l~~~~~dg~i~v 160 (479)
+...+|+|+|+.++++. ++.|.+||+...+ +..+.. |...+.+++|+ |+|+.+++++ ++.+.+
T Consensus 247 ~~~~~~SpDG~~la~~~-~~~i~~~d~~~~~---l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~ 321 (1045)
T 1k32_A 247 YYPRHLNTDGRRILFSK-GGSIYIFNPDTEK---IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFI 321 (1045)
T ss_dssp SCEEEEEESSSCEEEEE-TTEEEEECTTTCC---EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEE
T ss_pred cceeeEcCCCCEEEEEe-CCEEEEecCCceE---eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEE
Confidence 56779999999999885 8999999995543 224443 23468999999 9999999887 789999
Q ss_pred EEeCCCCceeeeeeeecccc-ceeEEEEecCCCEEEEEEcCCcEE-EEecCCcccceEeeeeecCCCccEEEEEEccCCC
Q psy14815 161 WEVGEEDEYECAAVINAHIQ-DVKKVRFHPFDNILASASYDDTVK-LFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS 238 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~-~v~~l~~~~~~~~l~~~~~dg~i~-i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 238 (479)
|++..+. ...+..|.. .+..++|+ +++.|++++.++.+. +||...+.. ..+..|...+..++|+|+|+
T Consensus 322 ~~~~~~~----~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~-----~~l~~~~~~~~~~~~SpDG~ 391 (1045)
T 1k32_A 322 QDVSGTY----VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKA-----EKFEENLGNVFAMGVDRNGK 391 (1045)
T ss_dssp ECTTSSB----EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCE-----EECCCCCCSEEEEEECTTSS
T ss_pred EcCCCCc----eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCc-----eEecCCccceeeeEECCCCC
Confidence 9988753 223455666 89999999 999999999888888 899886542 33447788999999999999
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCC----------eEE
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD----------AIR 308 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg----------~i~ 308 (479)
+|++++.++.|++||+..+ +......+| ...+.+++|+|||++|++++.++ .|+
T Consensus 392 ~la~~~~~~~v~~~d~~tg---------------~~~~~~~~~-~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~ 455 (1045)
T 1k32_A 392 FAVVANDRFEIMTVDLETG---------------KPTVIERSR-EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIH 455 (1045)
T ss_dssp EEEEEETTSEEEEEETTTC---------------CEEEEEECS-SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEE
T ss_pred EEEEECCCCeEEEEECCCC---------------ceEEeccCC-CCCccceEECCCCCeEEEEecCccccccCCCCCeEE
Confidence 9999999999999998543 334444454 67889999999999999887654 899
Q ss_pred EcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCcc
Q psy14815 309 IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 309 vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
+||+.+++ ...+ ..|...+.+++|+|||++|+..
T Consensus 456 l~d~~~g~----------~~~l-~~~~~~~~~~~~spdG~~l~~~ 489 (1045)
T 1k32_A 456 VYDMEGRK----------IFAA-TTENSHDYAPAFDADSKNLYYL 489 (1045)
T ss_dssp EEETTTTE----------EEEC-SCSSSBEEEEEECTTSCEEEEE
T ss_pred EEECCCCc----------EEEe-eCCCcccCCceEcCCCCEEEEE
Confidence 99998864 3333 4677788899999999988543
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-23 Score=215.12 Aligned_cols=294 Identities=10% Similarity=0.074 Sum_probs=198.0
Q ss_pred eEEEEECCCCCeEEEeeCCCcEEEEeccccccc-cc---------------------------ccCCCccceEEEeecCC
Q psy14815 14 VWNVSWNPQGTMISSCGEDKNIRLWVMVIREPY-EK---------------------------LHGLPVETSLRQLVEDK 65 (479)
Q Consensus 14 V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~-~~---------------------------~~~~~~~~~~~~~~~~~ 65 (479)
+..+.|+ |+.+++++.|+ | +||+.+++.+ .. +...++ ..+ ..+.++
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~-~~~~~~ 101 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLV-VLFTQG 101 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEE-EEEETT
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeE-EEEECC
Confidence 5557777 66777777788 8 9999988772 11 111233 333 334569
Q ss_pred cEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCC-----CeEEEeEEEeCCCCc----
Q psy14815 66 NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS-----GQFECNATLEGHENE---- 136 (479)
Q Consensus 66 ~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~~---- 136 (479)
.+.+||+... .. .....+...+.+++|+|||++|+++ .++.|++||+.+ ++.. .....+...
T Consensus 102 ~i~~~d~~~~--~~----~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~--~~~~~~~~~~~~g 172 (706)
T 2z3z_A 102 GLVGFDMLAR--KV----TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAI--AVTIDGTETLVYG 172 (706)
T ss_dssp EEEEEETTTT--EE----EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCE--ESCSCCBTTEEES
T ss_pred EEEEEECCCC--ce----EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcE--EeccCCCCCeEcc
Confidence 9999998742 11 1123456778899999999999996 579999999988 7532 222222222
Q ss_pred ----------EEEEEEcCCCCEEEEEe---------------------------------CCCcEEEEEeCCCCceeeee
Q psy14815 137 ----------VKSVTWSKNGQFLATCS---------------------------------RDKSVWVWEVGEEDEYECAA 173 (479)
Q Consensus 137 ----------v~~l~~~~~~~~l~~~~---------------------------------~dg~i~vwd~~~~~~~~~~~ 173 (479)
+.++.|+|||++|++++ .+..|.+||+.+++. ..+.
T Consensus 173 ~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~-~~~~ 251 (706)
T 2z3z_A 173 QAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKT-VYLQ 251 (706)
T ss_dssp SCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEE-EECC
T ss_pred cchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCce-Eeec
Confidence 47999999999999987 346799999987632 1122
Q ss_pred eeeccccceeEEEEecCCCEEEEEEcCC-----cEEEEecCCcccceEeeeeecCCC---ccEEEEEEcc--CCCEEEEe
Q psy14815 174 VINAHIQDVKKVRFHPFDNILASASYDD-----TVKLFKEDKAEADWINFATLKSHT---STVWSLAFDR--IGSRLATC 243 (479)
Q Consensus 174 ~~~~~~~~v~~l~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~---~~v~~~~~~~--~~~~l~s~ 243 (479)
....|...+.+++|+|+|+.|++++.++ .|++||..++... ..+.. ..+. ..+.+++|+| +|++++++
T Consensus 252 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~-~~~~~-~~~~~~~~~~~~~~~sp~~dg~~l~~~ 329 (706)
T 2z3z_A 252 TGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFV-RTLFV-ETDKHYVEPLHPLTFLPGSNNQFIWQS 329 (706)
T ss_dssp CCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEE-EEEEE-EECSSCCCCCSCCEECTTCSSEEEEEE
T ss_pred cCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCcee-eEEEE-ccCCCeECccCCceeecCCCCEEEEEE
Confidence 2224667799999999999999988776 8999999877321 11111 1122 2246789999 99999999
Q ss_pred eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEE-EEecCCCCeEEEEeCC-C----eEEEcccCCCCC
Q psy14815 244 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYD-ISWCHLTDLIATACGD-D----AIRIFKENPEAG 317 (479)
Q Consensus 244 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-l~~~~~~~~l~~~~~d-g----~i~vw~~~~~~~ 317 (479)
+.|+.+++|++.... ..+..+..+ ...+.+ ++|+|+++.|+.++.+ + .|..|+..+++
T Consensus 330 ~~~g~~~l~~~~~~~--------------~~~~~l~~~-~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~- 393 (706)
T 2z3z_A 330 RRDGWNHLYLYDTTG--------------RLIRQVTKG-EWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK- 393 (706)
T ss_dssp CTTSSCEEEEEETTS--------------CEEEECCCS-SSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-
T ss_pred ccCCccEEEEEECCC--------------CEEEecCCC-CeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-
Confidence 999999999875221 234555554 556766 8999999977665554 4 56666666654
Q ss_pred CCCceeeEEEeccccccccceeEEEecCCCCCCCc
Q psy14815 318 DSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 318 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~ 352 (479)
...+ .|...+.+++|||||++++.
T Consensus 394 ---------~~~l--~~~~~~~~~~~spdg~~l~~ 417 (706)
T 2z3z_A 394 ---------TKDL--TPESGMHRTQLSPDGSAIID 417 (706)
T ss_dssp ---------CEES--CCSSSEEEEEECTTSSEEEE
T ss_pred ---------ceec--cCCCceEEEEECCCCCEEEE
Confidence 2222 25667899999999998743
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-22 Score=187.95 Aligned_cols=276 Identities=12% Similarity=0.026 Sum_probs=183.6
Q ss_pred EEECCCCCe-EEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEE
Q psy14815 17 VSWNPQGTM-ISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 95 (479)
Q Consensus 17 l~~s~~~~~-l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~ 95 (479)
..|.+++++ +++++.++.|.+||..+++....+ ..+...+ +
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~-------------------------------------~~~~~~~-~ 44 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQI-------------------------------------TLGYDFV-D 44 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEE-------------------------------------ECCCCEE-E
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeE-------------------------------------EccCCcc-e
Confidence 345665554 677788999999998877654433 1234455 8
Q ss_pred EEECCCCCEEEEEEC-CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC---cEEEEEeCCCCceee
Q psy14815 96 TAWSPCGNFIASASF-DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK---SVWVWEVGEEDEYEC 171 (479)
Q Consensus 96 v~~~~~~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg---~i~vwd~~~~~~~~~ 171 (479)
++|+|+++++++++. ++.|.+||+.+++. ....+..+..+..+++|+|++++++++..++ .|.+||+.+. +.
T Consensus 45 ~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~---~~ 120 (331)
T 3u4y_A 45 TAITSDCSNVVVTSDFCQTLVQIETQLEPP-KVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKN---KF 120 (331)
T ss_dssp EEECSSSCEEEEEESTTCEEEEEECSSSSC-EEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTT---EE
T ss_pred EEEcCCCCEEEEEeCCCCeEEEEECCCCce-eEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCC---Ce
Confidence 999999997777666 88999999998873 1445555666655599999999999665553 8999999887 33
Q ss_pred eeeeeccccceeEEEEecCCCEEEEE-EcCCc-EEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe-eCCCe
Q psy14815 172 AAVINAHIQDVKKVRFHPFDNILASA-SYDDT-VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC-SDDAT 248 (479)
Q Consensus 172 ~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~-i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~ 248 (479)
...+.. .....+++|+|+|++++++ ..++. |.+|++......................++|+|+|++++.+ ..++.
T Consensus 121 ~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~ 199 (331)
T 3u4y_A 121 ISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNS 199 (331)
T ss_dssp EEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTE
T ss_pred EEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCe
Confidence 444433 3446899999999865555 55588 99999985432111101222345568999999999966554 46899
Q ss_pred EEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe-CCCeEEEcccCCCCCCCCceeeEE-
Q psy14815 249 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIFKENPEAGDSDMVSFDL- 326 (479)
Q Consensus 249 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~-~dg~i~vw~~~~~~~~~~~~~~~~- 326 (479)
|++||+...... ..+..+.. ...+..++|+|+|+++++++ .++.|.+||..+++.. ....
T Consensus 200 v~v~d~~~~~~~------------~~~~~~~~--~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~----~~~~~ 261 (331)
T 3u4y_A 200 IGILETQNPENI------------TLLNAVGT--NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLS----FVKSF 261 (331)
T ss_dssp EEEEECSSTTSC------------EEEEEEEC--SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEE----EEEEE
T ss_pred EEEEECCCCccc------------ceeeeccC--CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCcee----eeccc
Confidence 999998654321 22344443 35678999999999776554 5788999999887610 0000
Q ss_pred Eec--cccccccceeEEEecCCCCCCCcc
Q psy14815 327 VHT--EHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 327 ~~~--~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
... ...........++|+||+++|...
T Consensus 262 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 290 (331)
T 3u4y_A 262 GHGLLIDPRPLFGANQMALNKTETKLFIS 290 (331)
T ss_dssp ECCCCCCCGGGTTCCCEEECTTSSEEEEE
T ss_pred ccccccCCCCcccccceEECCCCCEEEEe
Confidence 111 101111223568999999987544
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.4e-22 Score=213.53 Aligned_cols=311 Identities=10% Similarity=0.027 Sum_probs=223.4
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCCCcEEEEeccccccccccc---------------------CC-CccceEEEee
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLH---------------------GL-PVETSLRQLV 62 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~---------------------~~-~~~~~~~~~~ 62 (479)
+.+.+|. .+...+|+|||++|+++. ++.|.+||+.... +..+. .. +++..++...
T Consensus 239 ~~l~~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~ 315 (1045)
T 1k32_A 239 RKHTSFT-DYYPRHLNTDGRRILFSK-GGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS 315 (1045)
T ss_dssp EECCCCC-SSCEEEEEESSSCEEEEE-TTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE
T ss_pred eEecCCC-CcceeeEcCCCCEEEEEe-CCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE
Confidence 4455555 467789999999999884 8899999984332 22222 23 4555555554
Q ss_pred cCCcEEEecCCCCCCceeeeEEeccccCC-cEEEEEECCCCCEEEEEECCCeEE-EEECCCCeEEEeEEEeCCCCcEEEE
Q psy14815 63 EDKNIRLWGKESFGNKFTAKAILSDGHQR-TIRETAWSPCGNFIASASFDATTA-VWDKRSGQFECNATLEGHENEVKSV 140 (479)
Q Consensus 63 ~~~~i~~w~~~~~~~~~~~~~~~~~~~~~-~v~~v~~~~~~~~l~t~~~dg~i~-iwd~~~~~~~~~~~~~~~~~~v~~l 140 (479)
++.+.+|+.... . ......|.. .+..++|+ +++.+++++.++.+. +||+.+++.. .+..|...+.++
T Consensus 316 -~~~i~~~~~~~~--~----~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~---~l~~~~~~~~~~ 384 (1045)
T 1k32_A 316 -RGQAFIQDVSGT--Y----VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE---KFEENLGNVFAM 384 (1045)
T ss_dssp -TTEEEEECTTSS--B----EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE---ECCCCCCSEEEE
T ss_pred -cCEEEEEcCCCC--c----eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce---EecCCccceeee
Confidence 778899987732 1 112345666 89999999 999999999988899 9999887532 334777899999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCC----------cEEEEecCC
Q psy14815 141 TWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD----------TVKLFKEDK 210 (479)
Q Consensus 141 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg----------~i~i~d~~~ 210 (479)
+|+|||++|++++.++.|++||+.+++ .......|...+.+++|+|+|++|++++.++ .|++||+.+
T Consensus 385 ~~SpDG~~la~~~~~~~v~~~d~~tg~---~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 385 GVDRNGKFAVVANDRFEIMTVDLETGK---PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCC---EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred EECCCCCEEEEECCCCeEEEEECCCCc---eEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 999999999999999999999998873 3444557888899999999999999887654 899999986
Q ss_pred cccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCC-------------------CCC------
Q psy14815 211 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAG-------------------IPT------ 265 (479)
Q Consensus 211 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-------------------~~~------ 265 (479)
+. ...+..|...+..++|+|+|++|++++.++...+|+......... +..
T Consensus 462 g~-----~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (1045)
T 1k32_A 462 RK-----IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSE 536 (1045)
T ss_dssp TE-----EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCC
T ss_pred Cc-----EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccc
Confidence 54 456677888899999999999999999888888887542211000 000
Q ss_pred ---CCCCCceEEEEEEeccccccEEEEEecCCCCeEEE-------------EeCCCeEEEcccCCCCCCCCceeeEEEec
Q psy14815 266 ---PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT-------------ACGDDAIRIFKENPEAGDSDMVSFDLVHT 329 (479)
Q Consensus 266 ---~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~-------------~~~dg~i~vw~~~~~~~~~~~~~~~~~~~ 329 (479)
-........+..+..+ ...+..++++|+++++++ ......|++||+.+++ ...
T Consensus 537 ~~~~d~~g~~~~~~~l~~~-~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~----------~~~ 605 (1045)
T 1k32_A 537 AGEYDLNDMYKRSSPINVD-PGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK----------VTE 605 (1045)
T ss_dssp CCCCCCTTGGGGCEECSCC-CBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCC----------EEE
T ss_pred cccccccCHhHceEEcCCC-CCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCc----------EEE
Confidence 0000000112233333 567899999999987775 1224578888888876 222
Q ss_pred cccccccceeEEEecCCCCCCCc
Q psy14815 330 EHRAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 330 ~~~~h~~~v~~~~~sp~~~~l~~ 352 (479)
+. ..+.+++|||||+.|+.
T Consensus 606 l~----~~v~~~~~S~DG~~l~~ 624 (1045)
T 1k32_A 606 VK----NNLTDLRLSADRKTVMV 624 (1045)
T ss_dssp EE----EEEEEEEECTTSCEEEE
T ss_pred ee----cCcceEEECCCCCEEEE
Confidence 21 56889999999998743
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-22 Score=209.34 Aligned_cols=282 Identities=9% Similarity=0.049 Sum_probs=187.5
Q ss_pred cccccccc---ceEEEEECCCCCeEEEeeCC---------CcEEEEecccccccccccCCCccceEEEeecCCcEEEecC
Q psy14815 5 QTLKGHQG---RVWNVSWNPQGTMISSCGED---------KNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGK 72 (479)
Q Consensus 5 ~~l~~h~~---~V~~l~~s~~~~~l~t~~~d---------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~ 72 (479)
+.+.+|.. .|.+++|||||++|++++.+ +.+.+||+.+++. ..+.
T Consensus 51 ~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~---------------------- 107 (723)
T 1xfd_A 51 VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLD---------------------- 107 (723)
T ss_dssp EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECC----------------------
T ss_pred EEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-Eecc----------------------
Confidence 44555654 49999999999999999865 6777888876654 1110
Q ss_pred CCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCc----------------
Q psy14815 73 ESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE---------------- 136 (479)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~---------------- 136 (479)
...+|...+..++|||||+.|++++. +.|++||+.+++.. .....+...
T Consensus 108 ------------~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~--~~~~~~~~~~~~~g~~~~v~~ee~~ 172 (723)
T 1xfd_A 108 ------------PPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAI--RVVSTGKEGVIYNGLSDWLYEEEIL 172 (723)
T ss_dssp ------------CTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCE--EEECCCBTTTEEEEECCHHHHHTTS
T ss_pred ------------CCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceE--EEecCCCCCceECcccceeEEEEec
Confidence 01245556888999999999999986 79999999988632 333333332
Q ss_pred --EEEEEEcCCCCEEEEEeCCC----------------------------------cEEEEEeCCCCceeeeeeeec---
Q psy14815 137 --VKSVTWSKNGQFLATCSRDK----------------------------------SVWVWEVGEEDEYECAAVINA--- 177 (479)
Q Consensus 137 --v~~l~~~~~~~~l~~~~~dg----------------------------------~i~vwd~~~~~~~~~~~~~~~--- 177 (479)
+.+++|+|||+.|++++.++ .|++||+.+++. ...+..
T Consensus 173 ~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~---~~~l~~~~~ 249 (723)
T 1xfd_A 173 KTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH---DLEMMPPDD 249 (723)
T ss_dssp SSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC---CEECCCCCC
T ss_pred cCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce---eEEeeCCcc
Confidence 37899999999999987653 799999987642 222332
Q ss_pred ---cccceeEEEEecCCCEEEEEEcC----CcEEEEecCCcccceEeeeeec-CCCccE----EEEEEccCCCEEEE--e
Q psy14815 178 ---HIQDVKKVRFHPFDNILASASYD----DTVKLFKEDKAEADWINFATLK-SHTSTV----WSLAFDRIGSRLAT--C 243 (479)
Q Consensus 178 ---~~~~v~~l~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~-~~~~~v----~~~~~~~~~~~l~s--~ 243 (479)
+...+.+++|+|+|+++++.... ..|++||+.+++. ...+. .+...+ ..++|+|+|+.|+. +
T Consensus 250 ~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~----~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 325 (723)
T 1xfd_A 250 PRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVC----TKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRA 325 (723)
T ss_dssp GGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCE----EEEEEEECSSCCCCCCCCCEECTTSCSEEEEEE
T ss_pred CCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcc----eEEEEeccCCEEeccCCCceEcCCCCeEEEEEe
Confidence 35678999999999988776543 5799999987663 12121 223333 37899999998775 4
Q ss_pred eCCC------eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEE-EEEecCCCCeEEEEeCC---CeEEEcccC
Q psy14815 244 SDDA------TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIY-DISWCHLTDLIATACGD---DAIRIFKEN 313 (479)
Q Consensus 244 ~~dg------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~l~~~~~~~~l~~~~~d---g~i~vw~~~ 313 (479)
..++ .|.+||........ +...+... ...+. .++|+|+++.|+..+.+ +.+++|++.
T Consensus 326 ~~~~~~~~~~~l~~~d~~~~~~~~------------~~~~l~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 326 IPQGGRGKFYHITVSSSQPNSSND------------NIQSITSG-DWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp ECCSSSSCEEEEEEECSSCCSSSC------------CCCBSCCS-SSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred cccCCCcceeEEEEEeccCCCCcc------------ceeEeecC-CeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 4666 45666622222200 00112211 22344 36999999998766655 789999987
Q ss_pred CCCCCCCceeeEEEecccc--ccccceeEEEecCCCCCCC
Q psy14815 314 PEAGDSDMVSFDLVHTEHR--AHNQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~sp~~~~l~ 351 (479)
...... ...+.. .|...+..++|||||++|+
T Consensus 393 ~~~~~~-------~~~l~~~~~~~~~~~~~~~spdg~~l~ 425 (723)
T 1xfd_A 393 TVGNFN-------RQCLSCDLVENCTYFSASFSHSMDFFL 425 (723)
T ss_dssp SSTTCC-------CBCSSTTSSSSCCCCEEEECTTSSEEE
T ss_pred CCCCCC-------cceecccccCCCCeEEEEECCCCCEEE
Confidence 543100 111211 1567789999999999774
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.90 E-value=5.9e-22 Score=191.02 Aligned_cols=218 Identities=16% Similarity=0.108 Sum_probs=158.5
Q ss_pred cccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
....++.+++++++.++++++.|+ +++|+............. . ..+. .........+
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~--~---------~~~~-----------~~~~~~~~~~ 91 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDD--P---------NKIV-----------DKVQGLLVPM 91 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCC--T---------TCEE-----------ECCCCEEECC
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccC--c---------cccc-----------ccCccccccC
Confidence 345689999999999999999888 999986432111000000 0 0000 0000011245
Q ss_pred CCcEEEEEECCCCCEEE----EEECCCeEEEEECCCC--------e-EEEeEEEeCCCCcEEEEEEcCC-CCEEEEEeCC
Q psy14815 90 QRTIRETAWSPCGNFIA----SASFDATTAVWDKRSG--------Q-FECNATLEGHENEVKSVTWSKN-GQFLATCSRD 155 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~----t~~~dg~i~iwd~~~~--------~-~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~~~d 155 (479)
...|.+++|+|++++|+ +|+.|+.|++||+.++ + ......+.+|...|.+++|+|+ +.+|++++.|
T Consensus 92 ~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~D 171 (434)
T 2oit_A 92 KFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLAD 171 (434)
T ss_dssp SSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETT
T ss_pred CCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECC
Confidence 77899999999999999 7888999999998654 1 1124456678999999999997 8899999999
Q ss_pred CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeec-------CCCccE
Q psy14815 156 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLK-------SHTSTV 228 (479)
Q Consensus 156 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-------~~~~~v 228 (479)
|+|++||+++. ........|...|++++|+|+|++|++|+.||.|++||.+ +.. ...+. .|...|
T Consensus 172 g~v~iwD~~~~---~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~----~~~~~~~~~~~~~~~~~v 243 (434)
T 2oit_A 172 GSIAVLQVTET---VKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQE----KKVIPCPPFYESDHPVRV 243 (434)
T ss_dssp SCEEEEEESSS---EEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCE----EEEECCCTTCCTTSCEEE
T ss_pred CeEEEEEcCCC---cceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Ccc----cccccCCcccCCCCceeE
Confidence 99999999987 3344556688899999999999999999999999999998 322 12222 234489
Q ss_pred EEEEEccCCCEEEEe-eCCC------eEEEEeccCCC
Q psy14815 229 WSLAFDRIGSRLATC-SDDA------TVKIWKEYKPG 258 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~-~~dg------~i~iwd~~~~~ 258 (479)
.++.|++++.++++. +.|| .+++|+++...
T Consensus 244 ~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 244 LDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp EEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred EEEEEecCceEEEEEccCCCccCCCCceEEEEeccCC
Confidence 999999988777543 3443 38999997653
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.5e-21 Score=179.39 Aligned_cols=256 Identities=9% Similarity=0.070 Sum_probs=173.8
Q ss_pred ccccccccceEEEEECCCCCeEEEeeC-CCcEEEEecccccc-cccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGE-DKNIRLWVMVIREP-YEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~-dg~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
.++..+...+ +++|+|+|+++++++. ++.|.+||..+++. ...+
T Consensus 34 ~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~--------------------------------- 79 (331)
T 3u4y_A 34 NQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAI--------------------------------- 79 (331)
T ss_dssp EEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEE---------------------------------
T ss_pred eeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEec---------------------------------
Confidence 3444455666 9999999997766655 88999999876654 2211
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCC---eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEE-eCCCc-
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDA---TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC-SRDKS- 157 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~- 157 (479)
..+..+..+++|+|++++++++..++ .|.+||+.+++ .+..+.. .....+++|+|+|++++++ ..++.
T Consensus 80 ----~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~--~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~ 152 (331)
T 3u4y_A 80 ----QEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNK--FISTIPI-PYDAVGIAISPNGNGLILIDRSSANT 152 (331)
T ss_dssp ----EECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTE--EEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTE
T ss_pred ----ccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCC--eEEEEEC-CCCccceEECCCCCEEEEEecCCCce
Confidence 22344444599999999999555553 89999999987 3444543 3456899999999866555 45588
Q ss_pred EEEEEeCCCCceeee-eeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEcc
Q psy14815 158 VWVWEVGEEDEYECA-AVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR 235 (479)
Q Consensus 158 i~vwd~~~~~~~~~~-~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 235 (479)
+.+|++......... ............++|+|+++++++++ .++.|.+||+.+++. ...+..+. ....+..++|+|
T Consensus 153 i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~-~~~~~~~~-~~~~~~~~~~sp 230 (331)
T 3u4y_A 153 VRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN-ITLLNAVG-TNNLPGTIVVSR 230 (331)
T ss_dssp EEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS-CEEEEEEE-CSSCCCCEEECT
T ss_pred EEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc-cceeeecc-CCCCCceEEECC
Confidence 999999865332111 11223345578999999999665554 688999999987653 11133333 335677899999
Q ss_pred CCCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc------ccccEEEEEecCCCCeEEEEeC-CCeE
Q psy14815 236 IGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH------HGRTIYDISWCHLTDLIATACG-DDAI 307 (479)
Q Consensus 236 ~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~i~~l~~~~~~~~l~~~~~-dg~i 307 (479)
+|++++.++ .++.|.+||+..... ..+..+..+ .......++|+|++++|++++. ++.|
T Consensus 231 dg~~l~v~~~~~~~i~~~d~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v 297 (331)
T 3u4y_A 231 DGSTVYVLTESTVDVFNFNQLSGTL-------------SFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISREL 297 (331)
T ss_dssp TSSEEEEECSSEEEEEEEETTTTEE-------------EEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEE
T ss_pred CCCEEEEEEcCCCEEEEEECCCCce-------------eeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcE
Confidence 999776554 578899999854321 112222211 1122356899999998866655 5699
Q ss_pred EEcccCCCC
Q psy14815 308 RIFKENPEA 316 (479)
Q Consensus 308 ~vw~~~~~~ 316 (479)
.+||+....
T Consensus 298 ~v~d~~~~~ 306 (331)
T 3u4y_A 298 KVFTISGKV 306 (331)
T ss_dssp EEEETTSCE
T ss_pred EEEEecCCc
Confidence 999998764
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.3e-21 Score=180.90 Aligned_cols=246 Identities=10% Similarity=0.063 Sum_probs=169.9
Q ss_pred ccCCcEEEEEECCCCCEEEEEEC---CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEEe
Q psy14815 88 GHQRTIRETAWSPCGNFIASASF---DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEV 163 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vwd~ 163 (479)
.+...+..++|+|+++ +++++. ++.|.+|++.+++...+..+..+...+..++|+|++++|++++ .++.+.+|++
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~ 115 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKI 115 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 3456778899999998 555554 6899999998887656666566677889999999999998888 6789999999
Q ss_pred CCCCceeeeeeeec---------cccceeEEEEecCCCEEEEEEcCCcEEEEecC-CcccceEeeeeecC-CCccEEEEE
Q psy14815 164 GEEDEYECAAVINA---------HIQDVKKVRFHPFDNILASASYDDTVKLFKED-KAEADWINFATLKS-HTSTVWSLA 232 (479)
Q Consensus 164 ~~~~~~~~~~~~~~---------~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~-~~~~v~~~~ 232 (479)
........+..+.. ....+.+++|+|+++++++...++.|.+|++. .+.. ........ ....+..++
T Consensus 116 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~--~~~~~~~~~~g~~p~~~~ 193 (347)
T 3hfq_A 116 AADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQL--SEQSVLTMEAGFGPRHLV 193 (347)
T ss_dssp CTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCE--EEEEEEECCTTCCEEEEE
T ss_pred CCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcE--EEeeeEEcCCCCCCceEE
Confidence 75433333333321 12247889999999966666678899999998 3332 22222222 234678899
Q ss_pred EccCCCEEEE-eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccc-----cccEEEEEecCCCCeE-EEEeCCC
Q psy14815 233 FDRIGSRLAT-CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-----GRTIYDISWCHLTDLI-ATACGDD 305 (479)
Q Consensus 233 ~~~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~l~~~~~~~~l-~~~~~dg 305 (479)
|+|+|+++++ +..++.|.+|++.... .....+..+.... ...+..++|+|+|++| ++...++
T Consensus 194 ~spdg~~l~v~~~~~~~v~v~~~~~~~-----------g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~ 262 (347)
T 3hfq_A 194 FSPDGQYAFLAGELSSQIASLKYDTQT-----------GAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYN 262 (347)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEETTT-----------TEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTT
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCC-----------CceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCC
Confidence 9999997665 5578899999986421 1112233333221 1458899999999977 4556689
Q ss_pred eEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 306 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 306 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.|.+|++.... .+..+... ..+...+..++|+|||++|+...
T Consensus 263 ~v~v~~~~~~g------~~~~~~~~-~~~~~~~~~~~~spdg~~l~v~~ 304 (347)
T 3hfq_A 263 TLAVFAVTADG------HLTLIQQI-STEGDFPRDFDLDPTEAFVVVVN 304 (347)
T ss_dssp EEEEEEECGGG------CEEEEEEE-ECSSSCCCEEEECTTSSEEEEEE
T ss_pred EEEEEEECCCC------cEEEeEEE-ecCCCCcCeEEECCCCCEEEEEE
Confidence 99999997431 11122222 34455688999999999886654
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.7e-20 Score=175.70 Aligned_cols=277 Identities=12% Similarity=0.103 Sum_probs=182.6
Q ss_pred cccceEEEEECCCCCeEEEeeCC----CcEEEEecccc-cccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEE
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGED----KNIRLWVMVIR-EPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAI 84 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~d----g~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~ 84 (479)
|...+..++|+|+|++|++++.+ +.|.+|++... ..+..+ .
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~----------------------------------~ 93 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLL----------------------------------N 93 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEE----------------------------------E
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEe----------------------------------e
Confidence 56677889999999999988875 78999987542 111110 0
Q ss_pred eccccCCcEEEEEECCCCCEEEEEE-CCCeEEEEECCCCe-EEEeE---EEeC--------CCCcEEEEEEcCCCCEEEE
Q psy14815 85 LSDGHQRTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQ-FECNA---TLEG--------HENEVKSVTWSKNGQFLAT 151 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~~~-~~~~~---~~~~--------~~~~v~~l~~~~~~~~l~~ 151 (479)
....+......+++ +++++++++ .++.|.+|++.... ..... ...+ +...+.+++|+|+|+++++
T Consensus 94 ~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~ 171 (361)
T 3scy_A 94 TQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLA 171 (361)
T ss_dssp EEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEE
T ss_pred EeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEE
Confidence 01224456677777 788777776 57899999997532 11111 1111 1234588999999997766
Q ss_pred EeC-CCcEEEEEeCCCCc------eee----eeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccce-Eee
Q psy14815 152 CSR-DKSVWVWEVGEEDE------YEC----AAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADW-INF 218 (479)
Q Consensus 152 ~~~-dg~i~vwd~~~~~~------~~~----~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~-~~~ 218 (479)
++. ++.|.+|++..... +.. .............++|+|+++++++++ .++.|.+||+.++.... ..+
T Consensus 172 ~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~ 251 (361)
T 3scy_A 172 DDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTV 251 (361)
T ss_dssp EETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEE
T ss_pred EeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEE
Confidence 654 78999999986532 211 111223345578999999999888777 68999999998554211 112
Q ss_pred eeecCCCccEEEEEEccCCCEEEEeeC--CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC
Q psy14815 219 ATLKSHTSTVWSLAFDRIGSRLATCSD--DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 296 (479)
Q Consensus 219 ~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~ 296 (479)
.....+......++|+|+|++|+++.. ++.|.+|++.... .....+..+.. ...+..++|+|+|+
T Consensus 252 ~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~-----------g~~~~~~~~~~--g~~~~~~~~spdg~ 318 (361)
T 3scy_A 252 AADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETN-----------GTLTKVGYQLT--GIHPRNFIITPNGK 318 (361)
T ss_dssp ESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTT-----------CCEEEEEEEEC--SSCCCEEEECTTSC
T ss_pred ecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCC-----------CcEEEeeEecC--CCCCceEEECCCCC
Confidence 222334456789999999999877665 4899999985321 11233444443 45678999999999
Q ss_pred eEEEEe-CCCeEEEcccC--CCCCCCCceeeEEEeccccccccceeEEEec
Q psy14815 297 LIATAC-GDDAIRIFKEN--PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN 344 (479)
Q Consensus 297 ~l~~~~-~dg~i~vw~~~--~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s 344 (479)
+|++++ .++.|.+|+++ +++ +.......+...+.|+.|.
T Consensus 319 ~l~~~~~~~~~v~v~~~d~~~g~---------~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 319 YLLVACRDTNVIQIFERDQATGL---------LTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEEEETTTTEEEEEEECTTTCC---------EEECSCCEECSSEEEEEEE
T ss_pred EEEEEECCCCCEEEEEEECCCCc---------EeecceeeeCCCCeEEEEc
Confidence 888887 57899997554 554 2222223355678899886
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.7e-22 Score=201.90 Aligned_cols=256 Identities=9% Similarity=0.020 Sum_probs=182.5
Q ss_pred cccceEEEEECCCCCeEEEeeC-CCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGE-DKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
+..+|++++|+|||++||+++. ||+++||++.+++... + ...
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-l------------------------------------t~~ 62 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-L------------------------------------NRE 62 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE-C------------------------------------CSS
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe-e------------------------------------ecc
Confidence 3668999999999999999887 9999999975443221 1 122
Q ss_pred cCCcEEEEEECCCCCEEEEEEC---CCeEEEE--EC--CCCeEEEeEEEeCCCCcEEEEEEcCCCCE-EEEEeCCCcEEE
Q psy14815 89 HQRTIRETAWSPCGNFIASASF---DATTAVW--DK--RSGQFECNATLEGHENEVKSVTWSKNGQF-LATCSRDKSVWV 160 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~---dg~i~iw--d~--~~~~~~~~~~~~~~~~~v~~l~~~~~~~~-l~~~~~dg~i~v 160 (479)
+...+..++|+|| +.+++++. +....+| +. .... . .+... ..+...+|+|+++. +++.+.++.+.+
T Consensus 63 ~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~-~---~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l 136 (582)
T 3o4h_A 63 PINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEE-Q---RLEAV-KPMRILSGVDTGEAVVFTGATEDRVAL 136 (582)
T ss_dssp CCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCC-E---ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEE
T ss_pred cccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCcc-c---cccCC-CCceeeeeCCCCCeEEEEecCCCCceE
Confidence 3368899999999 77777765 4545565 44 3332 1 23222 23456788888863 344445556669
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcC----CcEEEEecCCcccceEeeeeecCCCccEEEEEEccC
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 236 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 236 (479)
||+.+++ ... +..+.. .+++|+|||++|++++.+ +.|++||+.+++. ..+..|...+..++|+||
T Consensus 137 ~d~~~g~---~~~-l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~-----~~l~~~~~~~~~~~~SpD 205 (582)
T 3o4h_A 137 YALDGGG---LRE-LARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL-----RVFDSGEGSFSSASISPG 205 (582)
T ss_dssp EEEETTE---EEE-EEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC-----EEECCSSCEEEEEEECTT
T ss_pred EEccCCc---EEE-eecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc-----eEeecCCCccccceECCC
Confidence 9998863 222 222222 789999999999988877 7899999987663 456778888999999999
Q ss_pred CCEEEEeeCCC--eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEE--------ecCCCCeEEEEeCCCe
Q psy14815 237 GSRLATCSDDA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS--------WCHLTDLIATACGDDA 306 (479)
Q Consensus 237 ~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~--------~~~~~~~l~~~~~dg~ 306 (479)
|+.|+++..++ .|++||+.... .. .+.++ ...+..++ |+|||.++++++.|+.
T Consensus 206 G~~l~~~~~~~~~~i~~~d~~~~~---------------~~-~~~~~-~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~ 268 (582)
T 3o4h_A 206 MKVTAGLETAREARLVTVDPRDGS---------------VE-DLELP-SKDFSSYRPTAITWLGYLPDGRLAVVARREGR 268 (582)
T ss_dssp SCEEEEEECSSCEEEEEECTTTCC---------------EE-ECCCS-CSHHHHHCCSEEEEEEECTTSCEEEEEEETTE
T ss_pred CCEEEEccCCCeeEEEEEcCCCCc---------------EE-EccCC-CcChhhhhhccccceeEcCCCcEEEEEEcCCc
Confidence 99999888888 89999985432 22 33343 44555555 9999999999999999
Q ss_pred EEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCc
Q psy14815 307 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 307 i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~ 352 (479)
+++|++ ++ +.. ...+.+.+++|+ +++.+..
T Consensus 269 ~~l~~~--g~---------~~~----~~~~~v~~~~~s-dg~~l~~ 298 (582)
T 3o4h_A 269 SAVFID--GE---------RVE----APQGNHGRVVLW-RGKLVTS 298 (582)
T ss_dssp EEEEET--TE---------EEC----CCSSEEEEEEEE-TTEEEEE
T ss_pred EEEEEE--CC---------eec----cCCCceEEEEec-CCEEEEE
Confidence 999999 44 222 233678899999 8887743
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=6.2e-21 Score=196.58 Aligned_cols=275 Identities=13% Similarity=0.107 Sum_probs=192.2
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccc---------cCCCccceEEEeecCCcEEEecCCC-----CCC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKL---------HGLPVETSLRQLVEDKNIRLWGKES-----FGN 77 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~---------~~~~~~~~~~~~~~~~~i~~w~~~~-----~~~ 77 (479)
..|.+++|||| +.++.+. ++.|++||+.+++..... ...+++..++. ..++.|.+|++.. ...
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~-~~~~~i~v~~~~~~~~~~g~~ 158 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAY-VRNHNLYIARGGKLGEGMSRA 158 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEE-EETTEEEEEECBCTTSCCCCC
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEE-EECCeEEEEecCcccccCCCc
Confidence 56999999999 6666554 599999999887654322 12355666666 5789999999985 221
Q ss_pred ceeeeEEeccccCC--------------cEEEEEECCCCCEEEEEE---------------------------------C
Q psy14815 78 KFTAKAILSDGHQR--------------TIRETAWSPCGNFIASAS---------------------------------F 110 (479)
Q Consensus 78 ~~~~~~~~~~~~~~--------------~v~~v~~~~~~~~l~t~~---------------------------------~ 110 (479)
. .. ...+.. .+.+++|+|||++|++++ .
T Consensus 159 ~----~~-~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~ 233 (706)
T 2z3z_A 159 I----AV-TIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSH 233 (706)
T ss_dssp E----ES-CSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCC
T ss_pred E----Ee-ccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCC
Confidence 1 11 112222 258999999999999998 4
Q ss_pred CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC-----cEEEEEeCCCCceeeeeeeecccc---ce
Q psy14815 111 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK-----SVWVWEVGEEDEYECAAVINAHIQ---DV 182 (479)
Q Consensus 111 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~~~~~~~~~---~v 182 (479)
+..|.+||+.+++...+.....|...+.+++|+|||+.|++++.++ .|.+||+.+++....+.. ..+.. .+
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~-~~~~~~~~~~ 312 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFV-ETDKHYVEPL 312 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEE-EECSSCCCCC
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEE-ccCCCeECcc
Confidence 4689999999987433322235667899999999999999988776 899999988732222211 11221 24
Q ss_pred eEEEEec--CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEE-EEEccCCCEEEEeeCC-C----eEEEEec
Q psy14815 183 KKVRFHP--FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWS-LAFDRIGSRLATCSDD-A----TVKIWKE 254 (479)
Q Consensus 183 ~~l~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~s~~~d-g----~i~iwd~ 254 (479)
.+++|+| +|+++++++.++.+++|+++... .....+..+...+.. ++|+|+++.|+.++.+ + .|..||+
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~---~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTG---RLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTSSCEEEEEETTS---CEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred CCceeecCCCCEEEEEEccCCccEEEEEECCC---CEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence 6789999 99999999999999999886222 134566677777877 7999999988665544 3 4555555
Q ss_pred cCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC----CeEEEcccCCCC
Q psy14815 255 YKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD----DAIRIFKENPEA 316 (479)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d----g~i~vw~~~~~~ 316 (479)
.... ...+. + ...+.+++|+|++++++.++.+ +.|++||+.+++
T Consensus 390 ~~~~----------------~~~l~-~-~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 390 KGGK----------------TKDLT-P-ESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp TCCC----------------CEESC-C-SSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred CCCC----------------ceecc-C-CCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 3321 11222 2 4568899999999988876544 569999987754
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.89 E-value=6.3e-21 Score=177.88 Aligned_cols=259 Identities=8% Similarity=0.025 Sum_probs=184.3
Q ss_pred CeEEEeeCCCcEEEEecccccccccccC------------CCccceEE-EeecCCcEEEecCCCCCCceeeeEEeccc--
Q psy14815 24 TMISSCGEDKNIRLWVMVIREPYEKLHG------------LPVETSLR-QLVEDKNIRLWGKESFGNKFTAKAILSDG-- 88 (479)
Q Consensus 24 ~~l~t~~~dg~v~iwd~~~~~~~~~~~~------------~~~~~~~~-~~~~~~~i~~w~~~~~~~~~~~~~~~~~~-- 88 (479)
++|++++.+++|.+||..+++.+..+.. .+++..++ +...++.+.+||........ . .....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~--~-~~~~~~~ 78 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLG--R-IDLSTPE 78 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEE--E-EECCBTT
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEe--e-EEcCCcc
Confidence 4789999999999999988876655431 12333443 34456789999987432111 1 11111
Q ss_pred -cCCcEEEEEECCCCCEEEEEE------------CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy14815 89 -HQRTIRETAWSPCGNFIASAS------------FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 155 (479)
Q Consensus 89 -~~~~v~~v~~~~~~~~l~t~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d 155 (479)
+...+.+++|+|+++++++++ .++.|.+||+.+++ ....+.. ...+.+++|+|++++++++ +
T Consensus 79 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~--~~~~~~~-~~~~~~~~~s~dg~~l~~~--~ 153 (337)
T 1pby_B 79 ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS--RRKAFEA-PRQITMLAWARDGSKLYGL--G 153 (337)
T ss_dssp EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE--EEEEEEC-CSSCCCEEECTTSSCEEEE--S
T ss_pred cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCc--EEEEEeC-CCCcceeEECCCCCEEEEe--C
Confidence 223677899999999998886 57999999999886 3344443 4467889999999988888 6
Q ss_pred CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCC------------------------cEEEEecCCc
Q psy14815 156 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD------------------------TVKLFKEDKA 211 (479)
Q Consensus 156 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg------------------------~i~i~d~~~~ 211 (479)
+.|.+||+.+++ ....+..+.. ...+.|+|+++.++..+..+ .|.+||..++
T Consensus 154 ~~i~~~d~~~~~---~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 229 (337)
T 1pby_B 154 RDLHVMDPEAGT---LVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETG 229 (337)
T ss_dssp SSEEEEETTTTE---EEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTC
T ss_pred CeEEEEECCCCc---Eeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCC
Confidence 899999998873 3333333220 11237889887665554332 4689999877
Q ss_pred ccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEe
Q psy14815 212 EADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW 291 (479)
Q Consensus 212 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 291 (479)
+.. ...+..+...+.+++|+|++++++++ ++.|.+||+... +.+..+.. ...+.+++|
T Consensus 230 ~~~---~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~---------------~~~~~~~~--~~~~~~~~~ 287 (337)
T 1pby_B 230 EMA---MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN---------------ASIKRVPL--PHSYYSVNV 287 (337)
T ss_dssp CEE---EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT---------------EEEEEEEC--SSCCCEEEE
T ss_pred Cce---EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCC---------------cCcceecC--CCceeeEEE
Confidence 642 33345566778899999999999888 789999998432 44455543 346789999
Q ss_pred cCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 292 CHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 292 ~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+|++++|++++.++.|++||+.+++
T Consensus 288 s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 288 STDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp CTTSCEEEEESBSSEEEEEETTTCC
T ss_pred CCCCCEEEEEcCCCcEEEEECcCCc
Confidence 9999999999999999999999886
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-21 Score=188.06 Aligned_cols=205 Identities=10% Similarity=0.093 Sum_probs=156.5
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCC-----------eEE---EeEEEeCCCCcEEEEEEcCCCCEEE----E
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSG-----------QFE---CNATLEGHENEVKSVTWSKNGQFLA----T 151 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~-----------~~~---~~~~~~~~~~~v~~l~~~~~~~~l~----~ 151 (479)
...++.+++++++.++++++.++ +++|+.... ... .... -.+...|.+++|+|++++|+ +
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLL-VPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEE-ECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCcccc-ccCCCcccEEEEcCCCCEEEEEEec
Confidence 44688899999999999999887 888874210 000 0111 23567899999999999999 7
Q ss_pred EeCCCcEEEEEeCCC--------CceeeeeeeeccccceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEeeeeec
Q psy14815 152 CSRDKSVWVWEVGEE--------DEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLK 222 (479)
Q Consensus 152 ~~~dg~i~vwd~~~~--------~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 222 (479)
|+.|+.|++||+++. +.......+.+|...|++++|+|+ +++|++++.||+|++||++++.. .....
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~----~~~~~ 189 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVK----VCATL 189 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEE----EEEEE
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcc----eeecc
Confidence 888999999998754 222234566779999999999997 78999999999999999997642 44456
Q ss_pred CCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc------ccccEEEEEecCCCC
Q psy14815 223 SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH------HGRTIYDISWCHLTD 296 (479)
Q Consensus 223 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~i~~l~~~~~~~ 296 (479)
.|...|.+++|+|+|++|++|+.||.|++||.+ .. ....+..+ +...|.+++|++++.
T Consensus 190 ~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~---------------~~~~~~~~~~~~~~~~~~v~~v~w~~~~~ 253 (434)
T 2oit_A 190 PSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQ---------------EKKVIPCPPFYESDHPVRVLDVLWIGTYV 253 (434)
T ss_dssp CGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CC---------------EEEEECCCTTCCTTSCEEEEEEEEEETTE
T ss_pred CCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cc---------------ccccccCCcccCCCCceeEEEEEEecCce
Confidence 688999999999999999999999999999985 21 12222222 134899999999888
Q ss_pred eEEEE-eCCC------eEEEcccCCCC
Q psy14815 297 LIATA-CGDD------AIRIFKENPEA 316 (479)
Q Consensus 297 ~l~~~-~~dg------~i~vw~~~~~~ 316 (479)
++++. +.|| .+++|++...+
T Consensus 254 ~l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 254 FAIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp EEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred EEEEEccCCCccCCCCceEEEEeccCC
Confidence 77553 3443 38999998754
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.88 E-value=6.2e-21 Score=178.94 Aligned_cols=236 Identities=8% Similarity=-0.022 Sum_probs=171.4
Q ss_pred EEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEE
Q psy14815 16 NVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 95 (479)
Q Consensus 16 ~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~ 95 (479)
.++++++++++++++.+++|.+||..+++.+..+. .+....+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~------------------------------------~~~~~~~~~ 47 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCV------------------------------------MPDKFGPGT 47 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEE------------------------------------CSSCCSSCE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEe------------------------------------cCCCCCCce
Confidence 45778889999999999999999998776544331 111124678
Q ss_pred EEECCCCCEEE-EEECCCeEEEEECCCCeEEEeEEEeCC------CCcEEEEEEcCCCCEEEEEeCC------------C
Q psy14815 96 TAWSPCGNFIA-SASFDATTAVWDKRSGQFECNATLEGH------ENEVKSVTWSKNGQFLATCSRD------------K 156 (479)
Q Consensus 96 v~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~v~~l~~~~~~~~l~~~~~d------------g 156 (479)
++|+|++++++ ++..++.|.+||+.+++. ...+... ...+.+++|+|+|+++++++.+ +
T Consensus 48 ~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~--~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 125 (349)
T 1jmx_B 48 AMMAPDNRTAYVLNNHYGDIYGIDLDTCKN--TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPP 125 (349)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEE--EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCC
T ss_pred eEECCCCCEEEEEeCCCCcEEEEeCCCCcE--EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCC
Confidence 99999998665 445689999999999863 3334322 2237889999999999999865 8
Q ss_pred cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC-------------
Q psy14815 157 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS------------- 223 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------------- 223 (479)
.|.+||+.+++.......... ...+.+++|+|+++ +++++ +.|.+||..+++.. ..+..
T Consensus 126 ~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~----~~~~~~~~~~~~~~~~~~ 197 (349)
T 1jmx_B 126 RLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYT----VALPLRNWNRKGYSAPDV 197 (349)
T ss_dssp EEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEE----EEECSTTCCCTTBCCCBC
T ss_pred eEEEEECCCccccceeeeccC-CCcccceeECCCCc-EEEcc--CcEEEEeCCCCcee----ccccccccCCccccCccc
Confidence 999999987543333333333 34688999999999 55543 44999999876531 11111
Q ss_pred -------------------------------------------------------CCccEEEEEEcc-CCCEEEEeeCCC
Q psy14815 224 -------------------------------------------------------HTSTVWSLAFDR-IGSRLATCSDDA 247 (479)
Q Consensus 224 -------------------------------------------------------~~~~v~~~~~~~-~~~~l~s~~~dg 247 (479)
+...+..++|+| ++++++++ ++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~ 275 (349)
T 1jmx_B 198 LYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LN 275 (349)
T ss_dssp CCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ES
T ss_pred eeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cC
Confidence 112456778889 99999888 88
Q ss_pred eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 248 TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 248 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
.|.+||+... +.+..+.. ...+.+++|+|++++|++++.++.|++||..+++
T Consensus 276 ~v~~~d~~~~---------------~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 276 RLAKYDLKQR---------------KLIKAANL--DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp EEEEEETTTT---------------EEEEEEEC--SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred eEEEEECccC---------------eEEEEEcC--CCCccceEECCCCCEEEEecCCCeEEEEeccccc
Confidence 9999998433 44455543 3357799999999998888889999999998876
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-20 Score=194.29 Aligned_cols=271 Identities=15% Similarity=0.144 Sum_probs=189.8
Q ss_pred ceEEEEECCCCCeEEEeeCCCcEEEEeccccc--ccccccC----------CCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 13 RVWNVSWNPQGTMISSCGEDKNIRLWVMVIRE--PYEKLHG----------LPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~--~~~~~~~----------~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
.|.+++|||||++|++++. +.|.+||+.++. ....+.. .+++..++... ++.|.+|++... ..
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g--~~- 184 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASG--RQ- 184 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTT--EE-
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCC--CE-
Confidence 4889999999999999986 899999998872 2222222 24555555554 568999998742 11
Q ss_pred eeEEeccccCC----------------cEEEEEECCCCCEEEEEECCC--------------------------------
Q psy14815 81 AKAILSDGHQR----------------TIRETAWSPCGNFIASASFDA-------------------------------- 112 (479)
Q Consensus 81 ~~~~~~~~~~~----------------~v~~v~~~~~~~~l~t~~~dg-------------------------------- 112 (479)
. .....+.. .+.+++|+|||++|++++.|+
T Consensus 185 -~-~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~ 262 (741)
T 2ecf_A 185 -M-QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQ 262 (741)
T ss_dssp -E-ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCE
T ss_pred -E-EeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCe
Confidence 1 11122222 247899999999999998765
Q ss_pred -eEEEEECCC-CeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-----CCcEEEEEeCCCCceeeeeeeecccc----c
Q psy14815 113 -TTAVWDKRS-GQFECNATLEGHENEVKSVTWSKNGQFLATCSR-----DKSVWVWEVGEEDEYECAAVINAHIQ----D 181 (479)
Q Consensus 113 -~i~iwd~~~-~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-----dg~i~vwd~~~~~~~~~~~~~~~~~~----~ 181 (479)
.|.+||+.+ ++...+.....|...+.+++| |||+.|++++. +..|.+||+.+++ ....+..+.. .
T Consensus 263 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~---~~~~~~~~~~~~~~~ 338 (741)
T 2ecf_A 263 VKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ---QRVLAHETSPTWVPL 338 (741)
T ss_dssp EEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC---EEEEEEEECSSCCCC
T ss_pred eEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc---eEEEEEcCCCCcCCc
Confidence 889999988 763322111246778999999 99999987764 5679999998874 3333333332 4
Q ss_pred eeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEE-EEccCCCEEEE-eeCCC--eEEEEeccCC
Q psy14815 182 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSL-AFDRIGSRLAT-CSDDA--TVKIWKEYKP 257 (479)
Q Consensus 182 v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~s-~~~dg--~i~iwd~~~~ 257 (479)
+.+++|+|+|+++++++.+|.+++|.++.... ...+..+...+..+ .|+|+++.|+. ++.++ .+++|++...
T Consensus 339 ~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~----~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 414 (741)
T 2ecf_A 339 HNSLRFLDDGSILWSSERTGFQHLYRIDSKGK----AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQ 414 (741)
T ss_dssp CSCCEECTTSCEEEEECTTSSCEEEEECSSSC----EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETT
T ss_pred CCceEECCCCeEEEEecCCCccEEEEEcCCCC----eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcC
Confidence 56899999999999999999888887763221 45566778888887 59999998754 44555 8999998543
Q ss_pred CCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC----CeEEEcccCC
Q psy14815 258 GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD----DAIRIFKENP 314 (479)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d----g~i~vw~~~~ 314 (479)
... ...+.. ...+.+++|+|++++|+....+ ..+.+|+...
T Consensus 415 g~~--------------~~~l~~--~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~ 459 (741)
T 2ecf_A 415 GGQ--------------PQRLSK--APGMHSASFARNASVYVDSWSNNSTPPQIELFRANG 459 (741)
T ss_dssp CCC--------------CEECCC--SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTS
T ss_pred CCC--------------eeeccc--CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCC
Confidence 211 123333 3467899999999988776543 4688887643
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.87 E-value=4e-19 Score=167.65 Aligned_cols=244 Identities=16% Similarity=0.100 Sum_probs=165.6
Q ss_pred cCCcEEEEEECCCCCEEEEEECC----CeEEEEECCC--CeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEE
Q psy14815 89 HQRTIRETAWSPCGNFIASASFD----ATTAVWDKRS--GQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVW 161 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~d----g~i~iwd~~~--~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vw 161 (479)
+...+..++|+|++++|++++.+ +.|.+|++.. ++...+.....+......+++ +++++++++ .++.+.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 56677889999999999999886 7999998765 665556666656667788888 788777776 57899999
Q ss_pred EeCCCCceeeeeeeec-----------cccceeEEEEecCCCEEEEEE-cCCcEEEEecCCccc----c-eEe----eee
Q psy14815 162 EVGEEDEYECAAVINA-----------HIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEA----D-WIN----FAT 220 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~-----------~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~----~-~~~----~~~ 220 (479)
++.............. +...+.+++|+|+++++++++ .++.|.+|++..... . ... ...
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 9976533222211111 122357899999999776665 478999999875431 1 111 111
Q ss_pred ecCCCccEEEEEEccCCCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc--ccccEEEEEecCCCCe
Q psy14815 221 LKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH--HGRTIYDISWCHLTDL 297 (479)
Q Consensus 221 ~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~~~~~~ 297 (479)
...+...+..++|+|+|+++++++ .++.|.+|++.... ...+..+... +......++|+|+|++
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~-------------~~~~~~~~~~~~~~~~~~~i~~spdg~~ 272 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGM-------------LDEIQTVAADTVNAQGSGDIHLSPDGKY 272 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTE-------------EEEEEEEESCSSCCCCEEEEEECTTSSE
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCc-------------eEEeEEEecCCCCCCCcccEEECCCCCE
Confidence 223455678999999999887777 68999999986321 1222333221 1345689999999998
Q ss_pred EEEEeCC--CeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 298 IATACGD--DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 298 l~~~~~d--g~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
|++++.+ +.|.+|++...... +..+.... . ...+.+++|+|||++|+...
T Consensus 273 l~v~~~~~~~~i~v~~~~~~~g~-----~~~~~~~~-~-g~~~~~~~~spdg~~l~~~~ 324 (361)
T 3scy_A 273 LYASNRLKADGVAIFKVDETNGT-----LTKVGYQL-T-GIHPRNFIITPNGKYLLVAC 324 (361)
T ss_dssp EEEEECSSSCEEEEEEECTTTCC-----EEEEEEEE-C-SSCCCEEEECTTSCEEEEEE
T ss_pred EEEECCCCCCEEEEEEEcCCCCc-----EEEeeEec-C-CCCCceEEECCCCCEEEEEE
Confidence 8776654 89999999632211 11222221 2 45678999999999886654
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-20 Score=179.14 Aligned_cols=279 Identities=12% Similarity=0.009 Sum_probs=184.5
Q ss_pred cccccccccceEE-----EEECCCCCeEEEeeC-CCc--EEEEecccccccccccCCCccceEEEeecCCcEEEecCCCC
Q psy14815 4 SQTLKGHQGRVWN-----VSWNPQGTMISSCGE-DKN--IRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESF 75 (479)
Q Consensus 4 ~~~l~~h~~~V~~-----l~~s~~~~~l~t~~~-dg~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~ 75 (479)
+..|..|...... .+|+|||++|+.++. +|. |.+||+.+++.....
T Consensus 23 ~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt-------------------------- 76 (388)
T 3pe7_A 23 VTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLT-------------------------- 76 (388)
T ss_dssp EEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECC--------------------------
T ss_pred eEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEee--------------------------
Confidence 4556667666665 889999999999887 674 777777665543221
Q ss_pred CCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEE--EcCCCCEEEEE-
Q psy14815 76 GNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVT--WSKNGQFLATC- 152 (479)
Q Consensus 76 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~--~~~~~~~l~~~- 152 (479)
.++...+..+.|+||++.|+.++.++.|++||+.+++... ....+...+.... ++++++.++..
T Consensus 77 -----------~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~--~~~~~~~~~~~~~~~~~~dg~~l~~~~ 143 (388)
T 3pe7_A 77 -----------EGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENV--VYQVPAEWVGYGTWVANSDCTKLVGIE 143 (388)
T ss_dssp -----------CSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEE--EEECCTTEEEEEEEEECTTSSEEEEEE
T ss_pred -----------eCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCccee--eeechhhcccccceeECCCCCeecccc
Confidence 2344444456799999999999999999999999987443 3344445454444 48899988743
Q ss_pred ---------------------eCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcC------CcEE
Q psy14815 153 ---------------------SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYD------DTVK 204 (479)
Q Consensus 153 ---------------------~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~d------g~i~ 204 (479)
..+..|.+||+.+++. ..+..+...+..++|+| +++.|+....+ ..|.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~----~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~ 219 (388)
T 3pe7_A 144 IRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES----TVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMW 219 (388)
T ss_dssp EEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE----EEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEE
T ss_pred ccCcccccccccchhhhhhccCCcceEEEEECCCCce----EEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEE
Confidence 2346799999988632 23445566789999999 99988887753 3688
Q ss_pred EEecCCcccceEeeeeecCCC--ccEEEEEEccCCCEEEEeeC-C----CeEEEEeccCCCCCCCCCCCCCCCceEEEEE
Q psy14815 205 LFKEDKAEADWINFATLKSHT--STVWSLAFDRIGSRLATCSD-D----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT 277 (479)
Q Consensus 205 i~d~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~s~~~-d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 277 (479)
++|...... ..+..+. ..+..+.|+|+|+.|+..+. + ..|++||+..+.. +.+..
T Consensus 220 ~~d~~~~~~-----~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-------------~~l~~ 281 (388)
T 3pe7_A 220 LINEDGTNM-----RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN-------------RQLTS 281 (388)
T ss_dssp EEETTSCCC-----EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE-------------EEEEE
T ss_pred EEeCCCCce-----EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce-------------EEEEc
Confidence 888765442 2333333 35788999999998765443 2 2399999854421 22323
Q ss_pred Eeccc--cccEEEEEecCCCCeEEEE---------eCCCeEEEcccCCCCCCCCceeeEEEecccccccc----------
Q psy14815 278 LSGHH--GRTIYDISWCHLTDLIATA---------CGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ---------- 336 (479)
Q Consensus 278 ~~~~~--~~~i~~l~~~~~~~~l~~~---------~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~---------- 336 (479)
+.++. ......+.|+|+|+.|+.. ..+..|++||+.+++ ...+ ..+..
T Consensus 282 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~----------~~~l-~~~~~~~~~~~~~~~ 350 (388)
T 3pe7_A 282 MPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT----------QHRV-ARHDTSWKVFEGDRQ 350 (388)
T ss_dssp ECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTE----------EEEE-EECCCCCCCBTTBSS
T ss_pred CCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc----------eEEe-ccccCcccccccccc
Confidence 32210 0001123799999988754 456789999998875 2222 23333
Q ss_pred -ceeEEEecCCCCCCCccc
Q psy14815 337 -DVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 337 -~v~~~~~sp~~~~l~~~~ 354 (479)
.+.+++|||||+.|+..+
T Consensus 351 ~~~~~~~~spDg~~l~~~s 369 (388)
T 3pe7_A 351 VTHPHPSFTPDDKQILFTS 369 (388)
T ss_dssp TTCCCCEECTTSSEEEEEE
T ss_pred cCCCCccCCCCCCEEEEEe
Confidence 478899999999886543
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.4e-19 Score=167.38 Aligned_cols=239 Identities=8% Similarity=0.002 Sum_probs=171.2
Q ss_pred cceEEEEECCCCCeEEE-eeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 12 GRVWNVSWNPQGTMISS-CGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t-~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
..+.+++|+|+|++++. ...++.|.+||..+++.+..+..... . . ......
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~---------------------~---~----~~~~~~ 140 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDR---------------------K---R----TEEVRP 140 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCC---------------------C---C----CSSCCC
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCC---------------------c---c----ccccCC
Confidence 45778899999985554 45578999999887776544321100 0 0 000111
Q ss_pred CcEEEEEECCCCCEEEEEE--CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc
Q psy14815 91 RTIRETAWSPCGNFIASAS--FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 168 (479)
..+.+++|+|+++++++++ .++.|.+||..+++ ....+..+...+.+++|+|+++.+++++.++.|.+||+.+.+.
T Consensus 141 ~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~ 218 (353)
T 3vgz_A 141 LQPRELVADDATNTVYISGIGKESVIWVVDGGNIK--LKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKI 218 (353)
T ss_dssp CEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTE--EEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEE
T ss_pred CCCceEEECCCCCEEEEEecCCCceEEEEcCCCCc--eEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeE
Confidence 2378899999999887776 47899999999986 4455554556688999999999999999999999999988743
Q ss_pred eeeeeeee----ccccceeEEEEecCCCEEEEEEc-CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 169 YECAAVIN----AHIQDVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 169 ~~~~~~~~----~~~~~v~~l~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
...+. ++...+..++|+|+++++++++. ++.|.+||..+++. ...+.... ...++|+|++++++.+
T Consensus 219 ---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~----~~~~~~~~--~~~~~~s~dg~~l~v~ 289 (353)
T 3vgz_A 219 ---LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNI----LAKVAAPE--SLAVLFNPARNEAYVT 289 (353)
T ss_dssp ---EEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCE----EEEEECSS--CCCEEEETTTTEEEEE
T ss_pred ---EEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcE----EEEEEcCC--CceEEECCCCCEEEEE
Confidence 33332 24556788999999997777665 48999999987664 33333222 2568999999976655
Q ss_pred e-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCe
Q psy14815 244 S-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDA 306 (479)
Q Consensus 244 ~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~ 306 (479)
+ .++.|.+||.... +.+..+.. ...+.+++|+|++++|+++..++.
T Consensus 290 ~~~~~~v~~~d~~~~---------------~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~~~~ 336 (353)
T 3vgz_A 290 HRQAGKVSVIDAKSY---------------KVVKTFDT--PTHPNSLALSADGKTLYVSVKQKS 336 (353)
T ss_dssp ETTTTEEEEEETTTT---------------EEEEEEEC--CSEEEEEEECTTSCEEEEEEECCC
T ss_pred ECCCCeEEEEECCCC---------------eEEEEEec--CCCCCeEEEcCCCCEEEEEEcccc
Confidence 5 6899999997433 44555554 347899999999998877766643
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.86 E-value=3e-19 Score=168.67 Aligned_cols=253 Identities=11% Similarity=0.090 Sum_probs=168.0
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecc-cccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMV-IREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
..+..++|+|+|++|++++.+ .|.+|++. +++..... .. ..+
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~---------------------------------~~--~~~- 82 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEA---------------------------------SH--PIG- 82 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEE---------------------------------EE--ECC-
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEee---------------------------------Ee--ecC-
Confidence 467889999999988888877 89999875 44322110 00 001
Q ss_pred CcEEEEEECCCCCE--EEEEE-------------CCCeEEEEECC-CCeEEEe-EEEe-CCCCcEEEEEEcCCCCEEEEE
Q psy14815 91 RTIRETAWSPCGNF--IASAS-------------FDATTAVWDKR-SGQFECN-ATLE-GHENEVKSVTWSKNGQFLATC 152 (479)
Q Consensus 91 ~~v~~v~~~~~~~~--l~t~~-------------~dg~i~iwd~~-~~~~~~~-~~~~-~~~~~v~~l~~~~~~~~l~~~ 152 (479)
..+.+++|+|+|++ ++++. .++.+.+|++. .++.... ..+. .+...+.+++|+|+|++++++
T Consensus 83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~ 162 (365)
T 1jof_A 83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSA 162 (365)
T ss_dssp SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEE
Confidence 12345889999984 44543 68999999997 4543221 1221 245679999999999988887
Q ss_pred eC-CCcEEEEEeC-CCCceeeeeeee--ccccceeEEEEecCCCEEEEEEc-CCcEEEEecCC--cccce--Eeeeeec-
Q psy14815 153 SR-DKSVWVWEVG-EEDEYECAAVIN--AHIQDVKKVRFHPFDNILASASY-DDTVKLFKEDK--AEADW--INFATLK- 222 (479)
Q Consensus 153 ~~-dg~i~vwd~~-~~~~~~~~~~~~--~~~~~v~~l~~~~~~~~l~~~~~-dg~i~i~d~~~--~~~~~--~~~~~~~- 222 (479)
+. ++.|++||+. +++. .....+. .+...+..++|+|+|+++++++. ++.|.+|+++. +.... ..+..+.
T Consensus 163 ~~~~~~v~~~~~~~~g~~-~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~ 241 (365)
T 1jof_A 163 DLTANKLWTHRKLASGEV-ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPP 241 (365)
T ss_dssp ETTTTEEEEEEECTTSCE-EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCT
T ss_pred cCCCCEEEEEEECCCCCE-EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCC
Confidence 64 6799999998 5432 2222332 23566899999999999888775 68999998763 33210 1122222
Q ss_pred ---CCCc------cEEEEE-EccCCCEEEEeeCC-C-----eEEEEeccCCCCCCCCCCCCCCCceEEEE-EEecccccc
Q psy14815 223 ---SHTS------TVWSLA-FDRIGSRLATCSDD-A-----TVKIWKEYKPGNSAGIPTPDNDSVWKCVC-TLSGHHGRT 285 (479)
Q Consensus 223 ---~~~~------~v~~~~-~~~~~~~l~s~~~d-g-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 285 (479)
+|.. .+..++ |+|+|++|++++.+ + .|.+|++..... ...+. ....+ ...
T Consensus 242 ~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~------------~~~~~~~~~~~-~~~ 308 (365)
T 1jof_A 242 GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGS------------IEKQLFLSPTP-TSG 308 (365)
T ss_dssp TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSC------------EEEEEEEEECS-SCC
T ss_pred CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCC------------EEEeeeeeecC-CCC
Confidence 1222 588999 99999998876543 2 899999853211 11111 12222 445
Q ss_pred EEEEEecC---CCCeEEEEeCC-CeEEEcccCCC
Q psy14815 286 IYDISWCH---LTDLIATACGD-DAIRIFKENPE 315 (479)
Q Consensus 286 i~~l~~~~---~~~~l~~~~~d-g~i~vw~~~~~ 315 (479)
+..++|+| +|++|++++.+ +.|++|+++..
T Consensus 309 ~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 309 GHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred cccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 66789999 89999998864 89999998765
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.9e-20 Score=190.29 Aligned_cols=303 Identities=14% Similarity=0.126 Sum_probs=196.8
Q ss_pred EEEEECCCCCeEEEeeCCCcEEEEecccccccccc-------------cCCCccceEEEeec---------CCcEEEecC
Q psy14815 15 WNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKL-------------HGLPVETSLRQLVE---------DKNIRLWGK 72 (479)
Q Consensus 15 ~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~-------------~~~~~~~~~~~~~~---------~~~i~~w~~ 72 (479)
.+++|+|+|++++++ .|++|++||+.+++....+ ...+++..++..+. ++.+.+||+
T Consensus 19 ~~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred CccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 378999999666554 6999999999887754332 23466777777665 689999998
Q ss_pred CCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcE---------------
Q psy14815 73 ESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEV--------------- 137 (479)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v--------------- 137 (479)
.... ... .......+..++|||||+.|+++. ++.|++||+.+++...+ ...++...+
T Consensus 98 ~~g~--~~~----~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l-~~~~~~~~v~~g~~~~v~~ee~~~ 169 (719)
T 1z68_A 98 SNGE--FVR----GNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQI-TFNGRENKIFNGIPDWVYEEEMLA 169 (719)
T ss_dssp TTTE--ECC----SSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEEC-CCCCBTTTEEESSCCHHHHHHTTC
T ss_pred CCCc--ccc----ceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEE-ecCCCcCCeEcccccceeeeeccc
Confidence 7421 100 001125688899999999999986 78999999988863321 112222222
Q ss_pred --EEEEEcCCCCEEEEEeCCC----------------------------------cEEEEEeCCCCce--eee---eeee
Q psy14815 138 --KSVTWSKNGQFLATCSRDK----------------------------------SVWVWEVGEEDEY--ECA---AVIN 176 (479)
Q Consensus 138 --~~l~~~~~~~~l~~~~~dg----------------------------------~i~vwd~~~~~~~--~~~---~~~~ 176 (479)
.+++|+|||+.|++++.|. .|++||+.+++.. ..+ ..+.
T Consensus 170 ~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 249 (719)
T 1z68_A 170 TKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIA 249 (719)
T ss_dssp SSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHH
T ss_pred CcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCC
Confidence 4899999999999988652 7889999876321 011 1234
Q ss_pred ccccceeEEEEecCCCEEEEEEcCC----cEEEEe----cCCcccceEeeeee----cCCCccEE-----EEEEccCCCE
Q psy14815 177 AHIQDVKKVRFHPFDNILASASYDD----TVKLFK----EDKAEADWINFATL----KSHTSTVW-----SLAFDRIGSR 239 (479)
Q Consensus 177 ~~~~~v~~l~~~~~~~~l~~~~~dg----~i~i~d----~~~~~~~~~~~~~~----~~~~~~v~-----~~~~~~~~~~ 239 (479)
.|...+.+++|+|+++++++....+ .|.+|| ..+++. ...+ ..|...+. .+.|+|+|+.
T Consensus 250 ~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 325 (719)
T 1z68_A 250 SSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDC----PKTQEHIEESRTGWAGGFFVSTPVFSYDAIS 325 (719)
T ss_dssp TSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEEC----CGGGEEEEECSSSCSSSSSCCCCEECTTSSC
T ss_pred CCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCce----EEEEecccccCCceEccccCCccEECCCCCe
Confidence 5777899999999988777754332 488899 665442 2222 35666665 7899999996
Q ss_pred EEE--eeCCCe--EEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC-----CeEEEc
Q psy14815 240 LAT--CSDDAT--VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD-----DAIRIF 310 (479)
Q Consensus 240 l~s--~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d-----g~i~vw 310 (479)
++. ...+|. |.+||+.... ...+..+ ...+..+.++ +++.|+..+.+ +..++|
T Consensus 326 l~~~~~~~~g~~~l~~~~~~~~~----------------~~~lt~~-~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~ 387 (719)
T 1z68_A 326 YYKIFSDKDGYKHIHYIKDTVEN----------------AIQITSG-KWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIY 387 (719)
T ss_dssp EEEEEECTTSCEEEEEESSCSTT----------------CEECSCS-SSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEE
T ss_pred EEEEEEccCCceEEEEEECCCCc----------------eEecccC-ceEEEEEEEE-eCCEEEEEEecCCCCCceEEEE
Confidence 654 445564 5555653321 1233332 4457777777 77776666654 888999
Q ss_pred ccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCC
Q psy14815 311 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 351 (479)
.+....+.. ...++.....+|...+..+.|||++++++
T Consensus 388 ~~~~~~g~~---~~~~l~~~~~~~~~~~~~~~~s~dg~~l~ 425 (719)
T 1z68_A 388 RISIGSYPP---SKKCVTCHLRKERCQYYTASFSDYAKYYA 425 (719)
T ss_dssp EEECSSSSC---CEEESSTTTTTTTBCBEEEEECGGGSSEE
T ss_pred EEeCCCCCC---CceeccCccCCCCCceEEEEECCCCCEEE
Confidence 886522100 01122211223666788899999999875
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.83 E-value=5.1e-19 Score=164.91 Aligned_cols=252 Identities=7% Similarity=-0.010 Sum_probs=172.2
Q ss_pred eEEEeecCCcEEEecCCCCCCceeeeEEeccccCC-cEEEEEECCCCCEEE-EEECCCeEEEEECCCCeEEEeEEEeC--
Q psy14815 57 SLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR-TIRETAWSPCGNFIA-SASFDATTAVWDKRSGQFECNATLEG-- 132 (479)
Q Consensus 57 ~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~-~v~~v~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~-- 132 (479)
.+++...++.+.+||.... ... .....++.. .+..++|+|++++++ ++..++.|.+||+.+++.........
T Consensus 3 ~~v~~~~~~~v~~~d~~~~--~~~--~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 78 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKM--AVD--KVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE 78 (337)
T ss_dssp EEEEEETTTEEEEEETTTT--EEE--EEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTT
T ss_pred EEEEcCCCCeEEEEECCCC--cEE--EEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcc
Confidence 4677788999999998742 111 111122222 478899999998765 45557899999999887432222221
Q ss_pred -CCCcEEEEEEcCCCCEEEEEe------------CCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc
Q psy14815 133 -HENEVKSVTWSKNGQFLATCS------------RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY 199 (479)
Q Consensus 133 -~~~~v~~l~~~~~~~~l~~~~------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~ 199 (479)
+...+.+++|+|+++++++++ .++.|.+||+.+.+ ....+.. ...+.+++|+|++++|+++
T Consensus 79 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~---~~~~~~~-~~~~~~~~~s~dg~~l~~~-- 152 (337)
T 1pby_B 79 ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS---RRKAFEA-PRQITMLAWARDGSKLYGL-- 152 (337)
T ss_dssp EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE---EEEEEEC-CSSCCCEEECTTSSCEEEE--
T ss_pred cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCc---EEEEEeC-CCCcceeEECCCCCEEEEe--
Confidence 112567899999999999886 57999999998763 3333333 3457889999999988887
Q ss_pred CCcEEEEecCCcccceEeeeeecCCC--ccEEEEEEccCCCEEEEeeCCC------------------------eEEEEe
Q psy14815 200 DDTVKLFKEDKAEADWINFATLKSHT--STVWSLAFDRIGSRLATCSDDA------------------------TVKIWK 253 (479)
Q Consensus 200 dg~i~i~d~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~s~~~dg------------------------~i~iwd 253 (479)
++.|.+||+.+++. ...+..+. .+ +.|+|+++.++..+..+ .|.+||
T Consensus 153 ~~~i~~~d~~~~~~----~~~~~~~~~~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 225 (337)
T 1pby_B 153 GRDLHVMDPEAGTL----VEDKPIQSWEAE---TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMD 225 (337)
T ss_dssp SSSEEEEETTTTEE----EEEECSTTTTTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEE
T ss_pred CCeEEEEECCCCcE----eeeeeccccCCC---ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEe
Confidence 68999999987653 33333322 32 37899988776554332 367888
Q ss_pred ccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccc
Q psy14815 254 EYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRA 333 (479)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~ 333 (479)
+..... . ...+..+ ...+.+++|+|++++++++ ++.|++||+.+++ ....+.
T Consensus 226 ~~~~~~-------------~-~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~---------~~~~~~-- 277 (337)
T 1pby_B 226 LETGEM-------------A-MREVRIM-DVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNA---------SIKRVP-- 277 (337)
T ss_dssp TTTCCE-------------E-EEEEEEC-SSCEEEEEECTTSSEEEEE--ESEEEEEETTTTE---------EEEEEE--
T ss_pred CCCCCc-------------e-EeecCCC-CCceeeEEECCCCCEEEEe--CCeEEEEECCCCc---------Ccceec--
Confidence 744321 1 2223333 4578899999999999888 7999999998876 233322
Q ss_pred cccceeEEEecCCCCCCCcc
Q psy14815 334 HNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 334 h~~~v~~~~~sp~~~~l~~~ 353 (479)
....+.+++|+|++++|..+
T Consensus 278 ~~~~~~~~~~s~dg~~l~~~ 297 (337)
T 1pby_B 278 LPHSYYSVNVSTDGSTVWLG 297 (337)
T ss_dssp CSSCCCEEEECTTSCEEEEE
T ss_pred CCCceeeEEECCCCCEEEEE
Confidence 23467899999999977554
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.82 E-value=5.6e-18 Score=159.98 Aligned_cols=247 Identities=10% Similarity=-0.001 Sum_probs=160.7
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECC-CCeEEEeEEEeCCCCcEEEEEEcCCCCE--EEEEe-------------
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKR-SGQFECNATLEGHENEVKSVTWSKNGQF--LATCS------------- 153 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~v~~l~~~~~~~~--l~~~~------------- 153 (479)
...+..++|+|++++|++++.+ .|.+|++. +++.........+ +.+.+++|+|+|++ +++++
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 3467889999999999999987 99999997 7764333332222 23556899999994 45553
Q ss_pred CCCcEEEEEeCC-CCceeeeeeee-ccccceeEEEEecCCCEEEEEEc-CCcEEEEecC-CcccceEeeeeec--CCCcc
Q psy14815 154 RDKSVWVWEVGE-EDEYECAAVIN-AHIQDVKKVRFHPFDNILASASY-DDTVKLFKED-KAEADWINFATLK--SHTST 227 (479)
Q Consensus 154 ~dg~i~vwd~~~-~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~~-dg~i~i~d~~-~~~~~~~~~~~~~--~~~~~ 227 (479)
.+|.+.+|++.. ++....+..+. .+...+.+++|+|+|++++++.. ++.|++||+. +++. ..+..+. .|...
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~--~~~~~~~~~~~g~~ 194 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV--ELVGSVDAPDPGDH 194 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE--EEEEEEECSSTTCC
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE--EEeeeEecCCCCCC
Confidence 689999999974 32211222211 24457899999999998887764 6799999998 5543 2223332 24567
Q ss_pred EEEEEEccCCCEEEEeeC-CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc---ccc------cEEEEE-ecCCCC
Q psy14815 228 VWSLAFDRIGSRLATCSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH---HGR------TIYDIS-WCHLTD 296 (479)
Q Consensus 228 v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------~i~~l~-~~~~~~ 296 (479)
+..++|+|+|+++++++. ++.|.+|++........ .....+..+... +.. .+..++ |+|+|+
T Consensus 195 p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~ 267 (365)
T 1jof_A 195 PRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPV-------YTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGK 267 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE-------EEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSS
T ss_pred CCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEE-------EccceEEcCCCCcCCcccccccccccccEEEECCCCC
Confidence 899999999999988775 68999998743211000 000011112111 011 588999 999999
Q ss_pred eEEEEeCC-C-----eEEEcccC-CCCCCCCceeeEEEeccccccccceeEEEecC---CCCCCCccc
Q psy14815 297 LIATACGD-D-----AIRIFKEN-PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP---VVPEPQKTN 354 (479)
Q Consensus 297 ~l~~~~~d-g-----~i~vw~~~-~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp---~~~~l~~~~ 354 (479)
+|++++.+ + .|.+|++. +++ ...+......+...+..++|+| ||++|+...
T Consensus 268 ~l~v~~~~~~~~~~~~i~v~~~~~~g~-------~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~ 328 (365)
T 1jof_A 268 YMFASSRANKFELQGYIAGFKLRDCGS-------IEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITD 328 (365)
T ss_dssp EEEEEEEESSTTSCCEEEEEEECTTSC-------EEEEEEEEECSSCCTTCCCEEECTTCTTEEEEEC
T ss_pred EEEEECCCCCCCCCCeEEEEEECCCCC-------EEEeeeeeecCCCCcccceecCCCcCCCEEEEEE
Confidence 88877643 2 89999996 343 0011111122344567899999 898886654
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.82 E-value=3.7e-18 Score=176.43 Aligned_cols=307 Identities=13% Similarity=0.114 Sum_probs=188.3
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC---------------CCccceEEEeecC---------Cc
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG---------------LPVETSLRQLVED---------KN 66 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~---------------~~~~~~~~~~~~~---------~~ 66 (479)
.....++.|+|||++++++ ||+|++||+.+++....+.. .+++..++....+ +.
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence 3446789999999999886 89999999998875433222 4556666666654 45
Q ss_pred EEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcE---------
Q psy14815 67 IRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEV--------- 137 (479)
Q Consensus 67 i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v--------- 137 (479)
+.+||+.... ......+...+...+|||||+.||.+. ++.|.+|++.+++...+ +..++...+
T Consensus 94 ~~~~d~~~~~------~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~l-t~~g~~~~~~~g~~~~v~ 165 (740)
T 4a5s_A 94 YDIYDLNKRQ------LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRI-TWTGKEDIIYNGITDWVY 165 (740)
T ss_dssp EEEEETTTTE------ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEEC-CSCCBTTTEEESBCCHHH
T ss_pred EEEEECCCCc------EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEE-cCCCCccceecCcccccc
Confidence 6789988421 112345677899999999999999985 68999999988863322 222332222
Q ss_pred --------EEEEEcCCCCEEEEEeCCC------------------------------------cEEEEEeCC---CCcee
Q psy14815 138 --------KSVTWSKNGQFLATCSRDK------------------------------------SVWVWEVGE---EDEYE 170 (479)
Q Consensus 138 --------~~l~~~~~~~~l~~~~~dg------------------------------------~i~vwd~~~---~~~~~ 170 (479)
.++.|||||+.|+.++.|. .|++||+.+ ++...
T Consensus 166 ~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~ 245 (740)
T 4a5s_A 166 EEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNAT 245 (740)
T ss_dssp HHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCC
T ss_pred cchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcce
Confidence 3589999999999876432 477788877 52111
Q ss_pred eeeeee------ccccceeEEEEecCCCEEEEEEcC----CcEEEEecCCcccceEee--eee--cCCCccEE-----EE
Q psy14815 171 CAAVIN------AHIQDVKKVRFHPFDNILASASYD----DTVKLFKEDKAEADWINF--ATL--KSHTSTVW-----SL 231 (479)
Q Consensus 171 ~~~~~~------~~~~~v~~l~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~--~~~--~~~~~~v~-----~~ 231 (479)
. ..+. .+...+..++|+|+|+.++..... ..|.+||+.+++..+.+. ..+ ..|...|. .+
T Consensus 246 ~-~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p 324 (740)
T 4a5s_A 246 S-IQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEP 324 (740)
T ss_dssp E-EEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCC
T ss_pred E-EEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCc
Confidence 1 1222 366778999999999977665432 369999998776211111 111 33544443 68
Q ss_pred EEccCCCEEE-Eee-CCC--eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeE-EEEeC---
Q psy14815 232 AFDRIGSRLA-TCS-DDA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACG--- 303 (479)
Q Consensus 232 ~~~~~~~~l~-s~~-~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l-~~~~~--- 303 (479)
.|+|||+.|+ ..+ .+| .|++||...... ..+... ...+..+.. ++++.| ++++.
T Consensus 325 ~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~----------------~~lT~g-~~~v~~~~~-~d~~~i~f~~~~~~~ 386 (740)
T 4a5s_A 325 HFTLDGNSFYKIISNEEGYRHICYFQIDKKDC----------------TFITKG-TWEVIGIEA-LTSDYLYYISNEYKG 386 (740)
T ss_dssp EECTTSSEEEEEEECTTSCEEEEEEETTCSSC----------------EESCCS-SSCEEEEEE-ECSSEEEEEESCGGG
T ss_pred eEcCCCCEEEEEEEcCCCceEEEEEECCCCce----------------EecccC-CEEEEEEEE-EeCCEEEEEEecCCC
Confidence 8999999876 555 344 577777643221 122222 334444432 335544 44443
Q ss_pred -CCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 304 -DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 304 -dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
.+...||.+...... ...++.....+.......+.|||+++++
T Consensus 387 ~~~~~~ly~v~~~g~~----~~~~lt~~~~~~~~~~~~~~~S~dg~~~ 430 (740)
T 4a5s_A 387 MPGGRNLYKIQLIDYT----KVTCLSCELNPERCQYYSVSFSKEAKYY 430 (740)
T ss_dssp CTTCBEEEEEETTEEE----EEEESSTTTSTTTBCBEEEEECTTSSEE
T ss_pred CCceeEEEEEECCCCC----cceeeccccCCCCCceEEEEECCCCCEE
Confidence 234555554432200 0001111111234567889999999976
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.2e-18 Score=177.93 Aligned_cols=278 Identities=14% Similarity=0.134 Sum_probs=183.7
Q ss_pred ceEEEEECCCCCeEEEeeC---------CCcEEEEeccccccc--cc-------ccCCCccceEEEeecCCcEEEecCCC
Q psy14815 13 RVWNVSWNPQGTMISSCGE---------DKNIRLWVMVIREPY--EK-------LHGLPVETSLRQLVEDKNIRLWGKES 74 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~~---------dg~v~iwd~~~~~~~--~~-------~~~~~~~~~~~~~~~~~~i~~w~~~~ 74 (479)
.|.+++|||||++|++++. ++.|++||+.+++.+ .. ....|++..++.. .++.|++|++..
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~-~~~~i~~~~~~~ 139 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYV-YQNNIYLKQRPG 139 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEE-ETTEEEEESSTT
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEE-ECCeEEEEeCCC
Confidence 4999999999999999876 789999999988762 11 2224666666665 578999999875
Q ss_pred CCCceeeeEEeccccCCcE-----------------EEEEECCCCCEEEEEECCC-------------------------
Q psy14815 75 FGNKFTAKAILSDGHQRTI-----------------RETAWSPCGNFIASASFDA------------------------- 112 (479)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~v-----------------~~v~~~~~~~~l~t~~~dg------------------------- 112 (479)
.... .....++...| .+++|+|||++|++++.|.
T Consensus 140 g~~~----~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp 215 (719)
T 1z68_A 140 DPPF----QITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYP 215 (719)
T ss_dssp SCCE----ECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECC
T ss_pred CCcE----EEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCC
Confidence 3221 11112333222 4899999999999988652
Q ss_pred ---------eEEEEECCCCeEE---Ee---EEEeCCCCcEEEEEEcCCCCEEEEEeCCC----cEEEEE----eCCCCce
Q psy14815 113 ---------TTAVWDKRSGQFE---CN---ATLEGHENEVKSVTWSKNGQFLATCSRDK----SVWVWE----VGEEDEY 169 (479)
Q Consensus 113 ---------~i~iwd~~~~~~~---~~---~~~~~~~~~v~~l~~~~~~~~l~~~~~dg----~i~vwd----~~~~~~~ 169 (479)
.|++||+.+++.. .+ ..+.+|...+.+++|+||++++++....+ .|.+|| ..+++
T Consensus 216 ~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~-- 293 (719)
T 1z68_A 216 KAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWD-- 293 (719)
T ss_dssp BTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEE--
T ss_pred CCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCc--
Confidence 7899999887521 11 11335777899999999987777654332 488889 65542
Q ss_pred eeeeee----ecccccee-----EEEEecCCCEEEE--EEcCC--cEEEEecCCcccceEeeeeecCCCccEEEEEEccC
Q psy14815 170 ECAAVI----NAHIQDVK-----KVRFHPFDNILAS--ASYDD--TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 236 (479)
Q Consensus 170 ~~~~~~----~~~~~~v~-----~l~~~~~~~~l~~--~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 236 (479)
....+ ..|...+. .+.|+|+|+.++. +..+| .|.+||+.++. ...+..+...+..+.+. +
T Consensus 294 -~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-----~~~lt~~~~~v~~~~~~-d 366 (719)
T 1z68_A 294 -CPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-----AIQITSGKWEAINIFRV-T 366 (719)
T ss_dssp -CCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-----CEECSCSSSCEEEEEEE-C
T ss_pred -eEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-----eEecccCceEEEEEEEE-e
Confidence 22233 35566666 7899999986654 44555 46666766544 23455566678887777 8
Q ss_pred CCEEEEeeCC-----CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEec---cccccEEEEEecCCCCeEEEE-eCC--C
Q psy14815 237 GSRLATCSDD-----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG---HHGRTIYDISWCHLTDLIATA-CGD--D 305 (479)
Q Consensus 237 ~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~l~~~~~~~~l~~~-~~d--g 305 (479)
++.++..+.+ +..++|.+....... + ...+.. .+...+..+.|+|++++++.. +.+ .
T Consensus 367 ~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~-----------~-~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p 434 (719)
T 1z68_A 367 QDSLFYSSNEFEEYPGRRNIYRISIGSYPP-----------S-KKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIP 434 (719)
T ss_dssp SSEEEEEESCGGGCTTCBEEEEEECSSSSC-----------C-EEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSC
T ss_pred CCEEEEEEecCCCCCceEEEEEEeCCCCCC-----------C-ceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCC
Confidence 8887766654 889999875421100 0 111211 024567889999999877754 333 4
Q ss_pred eEEEcccCCCC
Q psy14815 306 AIRIFKENPEA 316 (479)
Q Consensus 306 ~i~vw~~~~~~ 316 (479)
.+.+||+.+++
T Consensus 435 ~~~l~d~~~g~ 445 (719)
T 1z68_A 435 ISTLHDGRTDQ 445 (719)
T ss_dssp EEEEECSSSCC
T ss_pred eEEEEECCCCC
Confidence 68888886654
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.80 E-value=9.5e-19 Score=176.06 Aligned_cols=220 Identities=10% Similarity=0.052 Sum_probs=157.7
Q ss_pred cCCcEEEEEECCCCCEEEEEEC-CCeEEEEECCCCeEEEeEEEeCCC-CcEEEEEEcCCCCEEEEEeC---CCcEEEEEe
Q psy14815 89 HQRTIRETAWSPCGNFIASASF-DATTAVWDKRSGQFECNATLEGHE-NEVKSVTWSKNGQFLATCSR---DKSVWVWEV 163 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~l~~~~~---dg~i~vwd~ 163 (479)
+..+|.+++|+|||++|++++. ||+++||++.+++ ...+..+. ..+.++.|+|| +.+++++. +...++|.+
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~---~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGE---TVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTE---EEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEE
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCC---cEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEE
Confidence 3568999999999999999887 9999999997775 23444454 58999999999 77777765 455677766
Q ss_pred CC--CCceeeeeeeeccccceeEEEEecCCCE-EEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEE
Q psy14815 164 GE--EDEYECAAVINAHIQDVKKVRFHPFDNI-LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 164 ~~--~~~~~~~~~~~~~~~~v~~l~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 240 (479)
.. ..... .+... ......+|+|+++. +++.+.++.+.+||+.+++. ..+..+.. .+++|+|||++|
T Consensus 96 ~~~~~g~~~---~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~-----~~l~~~~~--~~~~~spDG~~l 164 (582)
T 3o4h_A 96 NTSRPGEEQ---RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGL-----RELARLPG--FGFVSDIRGDLI 164 (582)
T ss_dssp ETTSTTCCE---ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE-----EEEEEESS--CEEEEEEETTEE
T ss_pred eccCCCccc---cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcE-----EEeecCCC--ceEEECCCCCEE
Confidence 54 32212 22211 23446688888753 33444455566999987653 12222222 789999999999
Q ss_pred EEeeCC----CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCC--eEEEcccCC
Q psy14815 241 ATCSDD----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD--AIRIFKENP 314 (479)
Q Consensus 241 ~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg--~i~vw~~~~ 314 (479)
++++.+ +.|++||+..+.. ..+..+ ...+..++|+|||++|+++..++ .|++||+.+
T Consensus 165 a~~~~~~~~~~~i~~~d~~~g~~----------------~~l~~~-~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~ 227 (582)
T 3o4h_A 165 AGLGFFGGGRVSLFTSNLSSGGL----------------RVFDSG-EGSFSSASISPGMKVTAGLETAREARLVTVDPRD 227 (582)
T ss_dssp EEEEEEETTEEEEEEEETTTCCC----------------EEECCS-SCEEEEEEECTTSCEEEEEECSSCEEEEEECTTT
T ss_pred EEEEEcCCCCeEEEEEcCCCCCc----------------eEeecC-CCccccceECCCCCEEEEccCCCeeEEEEEcCCC
Confidence 988877 7899999754321 244554 66789999999999999888888 899999998
Q ss_pred CCCCCCceeeEEEeccccccccceeEEE--------ecCCCCCCC
Q psy14815 315 EAGDSDMVSFDLVHTEHRAHNQDVNCVA--------WNPVVPEPQ 351 (479)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~--------~sp~~~~l~ 351 (479)
++ .. ...+|...+..++ |||||..++
T Consensus 228 ~~----------~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~ 261 (582)
T 3o4h_A 228 GS----------VE-DLELPSKDFSSYRPTAITWLGYLPDGRLAV 261 (582)
T ss_dssp CC----------EE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEE
T ss_pred Cc----------EE-EccCCCcChhhhhhccccceeEcCCCcEEE
Confidence 87 33 4457777777777 999995543
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.79 E-value=2.9e-17 Score=154.46 Aligned_cols=277 Identities=13% Similarity=0.075 Sum_probs=184.6
Q ss_pred ccccccccceEEEEECCCCCeEEEee----------CCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCC
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCG----------EDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKES 74 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~ 74 (479)
.++..+..+ .++|+|||+++++++ .+++|.+||..+++.+..+...+.
T Consensus 45 ~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~-------------------- 102 (361)
T 2oiz_A 45 GMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPK-------------------- 102 (361)
T ss_dssp EEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTT--------------------
T ss_pred EEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcc--------------------
Confidence 344445555 899999999998886 367799999877666554421000
Q ss_pred CCCceeeeEEeccccCCcEEEEEECCCCCEEEEEEC--CCeEEEEECCCCeEEEeEE-EeCCCCcEEEEEEcCCC-CEEE
Q psy14815 75 FGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF--DATTAVWDKRSGQFECNAT-LEGHENEVKSVTWSKNG-QFLA 150 (479)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~--dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~l~~~~~~-~~l~ 150 (479)
...+......++++|+|++|+++.. +++|.+||+.+++ .+.. +.. . ....+.+.|++ ..++
T Consensus 103 -----------~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~--~~~~~i~~-~-~~~~v~~~p~~~~~~~ 167 (361)
T 2oiz_A 103 -----------RVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGD--YVEDVTAA-A-GCWSVIPQPNRPRSFM 167 (361)
T ss_dssp -----------BCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTE--EEEEEGGG-T-TEEEEEECTTSSSEEE
T ss_pred -----------ccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCc--EEEEEecC-C-CcceeEEcCCCCeeEE
Confidence 0012345667899999999998874 5899999999986 3444 332 2 22335667765 6788
Q ss_pred EEeCCCcEEEEEeCCCCcee-ee---eeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC---
Q psy14815 151 TCSRDKSVWVWEVGEEDEYE-CA---AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS--- 223 (479)
Q Consensus 151 ~~~~dg~i~vwd~~~~~~~~-~~---~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--- 223 (479)
+.+.||.+.+|++....... .. ..+.....++ .+.+++++..++..+.++.|.++|+............+..
T Consensus 168 ~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~ 246 (361)
T 2oiz_A 168 TICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDED 246 (361)
T ss_dssp EEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHH
T ss_pred EECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccc
Confidence 88999999999987632211 11 1112222222 3344677777777888999999998754421111111100
Q ss_pred -C----CccEEEEEEccCCCEEEEeeC-----------CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEE
Q psy14815 224 -H----TSTVWSLAFDRIGSRLATCSD-----------DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIY 287 (479)
Q Consensus 224 -~----~~~v~~~~~~~~~~~l~s~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 287 (479)
+ ......++|+|+++.++++.. .+.|.+||+. +.+.+.++..+ . +.
T Consensus 247 ~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~---------------t~~~v~~i~~~-~--p~ 308 (361)
T 2oiz_A 247 KAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTK---------------TKQRVARIPGR-D--AL 308 (361)
T ss_dssp HHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETT---------------TTEEEEEEECT-T--CC
T ss_pred cccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECC---------------CCcEEEEEecC-C--ee
Confidence 0 011112689999888877643 3489999973 34667888875 3 99
Q ss_pred EEEecCCCCeEEEEeCCCeEEEcccCCC--CCCCCceeeEEEeccccccccceeEEEecCCCC
Q psy14815 288 DISWCHLTDLIATACGDDAIRIFKENPE--AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP 348 (479)
Q Consensus 288 ~l~~~~~~~~l~~~~~dg~i~vw~~~~~--~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~ 348 (479)
+++|+|+|++|++++. +.|.+||..++ + ++..+ ..+......++++|+|.
T Consensus 309 ~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~---------~~~~i-~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 309 SMTIDQQRNLMLTLDG-GNVNVYDISQPEPK---------LLRTI-EGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEEETTTTEEEEECS-SCEEEEECSSSSCE---------EEEEE-TTSCSSEEEEEECCCSC
T ss_pred EEEECCCCCEEEEeCC-CeEEEEECCCCcce---------eeEEe-ccCCCCcEEEEecCCCC
Confidence 9999999999998887 99999999998 6 34443 34566788999999986
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.79 E-value=3.3e-16 Score=142.47 Aligned_cols=247 Identities=13% Similarity=0.161 Sum_probs=173.9
Q ss_pred cccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecc
Q psy14815 8 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSD 87 (479)
Q Consensus 8 ~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~ 87 (479)
.+|-..+.+++++++++++++.+.++.|.+||.. ++.+..+... + ...
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~-----------------------~--------~~~ 73 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGEC-----------------------G--------KRD 73 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCB-----------------------S--------SST
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEeccc-----------------------C--------CCc
Confidence 3566789999999999988888889999999965 3332222100 0 012
Q ss_pred ccCCcEEEEEE-CCCCCEEEEEEC-CCeEEEEECCCCeEEEeEEEe-CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeC
Q psy14815 88 GHQRTIRETAW-SPCGNFIASASF-DATTAVWDKRSGQFECNATLE-GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 164 (479)
Q Consensus 88 ~~~~~v~~v~~-~~~~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~ 164 (479)
++...+..+++ .+++.++++... ++.|.+||. +++ ....+. .+...+.+++++++++++++...++.|.+||..
T Consensus 74 ~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~-~g~--~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 150 (286)
T 1q7f_A 74 SQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ-YGQ--FVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN 150 (286)
T ss_dssp TCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT-TSC--EEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred ccccCceEEEEEcCCCeEEEEcCCCCCEEEEECC-CCc--EEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC
Confidence 34567889999 467766666543 789999994 454 333443 234578999999999977777778999999965
Q ss_pred CCCceeeeeeee--ccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC--CCccEEEEEEccCCCEE
Q psy14815 165 EEDEYECAAVIN--AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS--HTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 165 ~~~~~~~~~~~~--~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l 240 (479)
.. ....+. .+...+..++++|+++++++...++.|++||..... +..+.. +...+..++++++|+.+
T Consensus 151 g~----~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~-----~~~~~~~g~~~~p~~i~~d~~G~l~ 221 (286)
T 1q7f_A 151 GN----VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQY-----LRQIGGEGITNYPIGVGINSNGEIL 221 (286)
T ss_dssp SC----EEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCE-----EEEESCTTTSCSEEEEEECTTCCEE
T ss_pred CC----EEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCE-----EEEEccCCccCCCcEEEECCCCCEE
Confidence 42 222222 334568899999999988887889999999975321 333332 33678999999999888
Q ss_pred EEeeCCC-eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccc-cccEEEEEecCCCCeEEEEeCCCeEEEcccCCC
Q psy14815 241 ATCSDDA-TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-GRTIYDISWCHLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 241 ~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
++...++ .|.+||.. . +.+..+..+. ...+.+++++|+|+++++ +.|+.|++|++...
T Consensus 222 v~~~~~~~~i~~~~~~-g---------------~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 222 IADNHNNFNLTIFTQD-G---------------QLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEECSSSCEEEEECTT-S---------------CEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred EEeCCCCEEEEEECCC-C---------------CEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 8887776 99999842 1 2234444331 234789999999987776 67999999998654
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.3e-18 Score=166.04 Aligned_cols=263 Identities=11% Similarity=0.029 Sum_probs=170.2
Q ss_pred eEEEEECCCCCeEEEeeCC-C--cEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 14 VWNVSWNPQGTMISSCGED-K--NIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 14 V~~l~~s~~~~~l~t~~~d-g--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
+.+++|+|||++|+.+... + .|.+||+.+++..... .++.
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~-------------------------------------~~~~ 80 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLT-------------------------------------EGKG 80 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECC-------------------------------------CSSC
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEee-------------------------------------cCCC
Confidence 7888999999998877543 3 5777777655432111 1112
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEE-------------------EEEcCCCCEEEE
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKS-------------------VTWSKNGQFLAT 151 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~-------------------l~~~~~~~~l~~ 151 (479)
.....+.|+|+|++|+.++.++.|.+||+.+++...+. ..+...... +.|+|+++.++.
T Consensus 81 ~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~--~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~ 158 (396)
T 3c5m_A 81 DNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIY--TVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKF 158 (396)
T ss_dssp BCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEE--ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHH
T ss_pred CccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEE--ecccccCCCCCEEEeccCCccccccccccccCCCCcceee
Confidence 22223679999999999999999999999988643333 323332222 346777776655
Q ss_pred E-----eCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcC------CcEEEEecCCcccceEeee
Q psy14815 152 C-----SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYD------DTVKLFKEDKAEADWINFA 219 (479)
Q Consensus 152 ~-----~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~ 219 (479)
+ ..+..|.+||+.+++. ..+..+...+..+.|+| +++.|+..+.+ ..|.+||+..+.. .
T Consensus 159 ~~~~~~~~~~~l~~~d~~~g~~----~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-----~ 229 (396)
T 3c5m_A 159 AEFYHTNPTCRLIKVDIETGEL----EVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-----R 229 (396)
T ss_dssp HHHHHTCCCEEEEEEETTTCCE----EEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-----E
T ss_pred eeeccCCCcceEEEEECCCCcE----EeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-----e
Confidence 4 3556899999987642 12234566789999999 78877776643 3588888865442 2
Q ss_pred eecCC--CccEEEEEEccCCCEEEEeeCC-----CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec
Q psy14815 220 TLKSH--TSTVWSLAFDRIGSRLATCSDD-----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 292 (479)
Q Consensus 220 ~~~~~--~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 292 (479)
.+..+ ...+..+.|+|+|++|+.++.+ +.|++||+..... ..+..+.+ .. +.|+
T Consensus 230 ~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-------------~~l~~~~~-----~~-~~~s 290 (396)
T 3c5m_A 230 KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN-------------EEVMVMPP-----CS-HLMS 290 (396)
T ss_dssp ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE-------------EEEEECCS-----EE-EEEE
T ss_pred EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe-------------EEeeeCCC-----CC-CCcc
Confidence 22222 3358889999999988776544 4599999754321 11222211 22 8899
Q ss_pred C-CCCeEEEEe----------------CCCeEEEcccCCCCCCCCceeeEEEecccccccc-----------ceeEEEec
Q psy14815 293 H-LTDLIATAC----------------GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ-----------DVNCVAWN 344 (479)
Q Consensus 293 ~-~~~~l~~~~----------------~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~-----------~v~~~~~s 344 (479)
| +|+++++++ .++.|++||+.+++ ...+ ..+.. .+..++|+
T Consensus 291 ~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~----------~~~l-~~~~~~~~~~~~~~~~~~~~~~~s 359 (396)
T 3c5m_A 291 NFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS----------AQKL-CKHSTSWDVLDGDRQITHPHPSFT 359 (396)
T ss_dssp CSSSSEEEEEECCC----------CCCCCCEEEEEETTTTB----------CCEE-EECCCCCCCBTTBSSTTCCCCEEC
T ss_pred CCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCc----------eEEc-cCCCCccccccccccCCCCCceEc
Confidence 9 999888765 34789999998775 1111 12222 25667899
Q ss_pred CCCCCCCccc
Q psy14815 345 PVVPEPQKTN 354 (479)
Q Consensus 345 p~~~~l~~~~ 354 (479)
|||+.|+...
T Consensus 360 ~dg~~l~~~s 369 (396)
T 3c5m_A 360 PNDDGVLFTS 369 (396)
T ss_dssp TTSSEEEEEE
T ss_pred cCCCeEEEEe
Confidence 9998876543
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=9.6e-17 Score=149.12 Aligned_cols=269 Identities=10% Similarity=0.050 Sum_probs=182.1
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
-+.+.+++++|+|+++++.+.++.+++++... ...+....... ..++.+.+||..+.. . ......++.
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~---~~~~~~~~~~~-----~~~~~i~~~d~~~g~--~--~~~~~~~~~ 90 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDS---KFVYQQRGLGP-----IEEDTILVIDPNNAE--I--LQSSGKNLF 90 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCT---TSCBSCGGGCS-----CCSCCEEEECTTTCC--E--EEEECTTTC
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCc---ceeeccccccc-----ccCCcEEEEECCCCe--E--EeccCCCcc
Confidence 46799999999999999888886655543322 22221111111 146778888775322 1 111223455
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEE---------eCCCCcEEEEEEcC-CCCEEEEEe-CCCcEE
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL---------EGHENEVKSVTWSK-NGQFLATCS-RDKSVW 159 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~---------~~~~~~v~~l~~~~-~~~~l~~~~-~dg~i~ 159 (479)
.....++++|+|+++++...++.|++||..... ..+..+ ..+-.....++++| ++.++++.+ .++.|+
T Consensus 91 ~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~-~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~ 169 (329)
T 3fvz_A 91 YLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE-GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIV 169 (329)
T ss_dssp SSEEEEEECTTSCEEEEETTTTEEEEECTTCSS-CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEE
T ss_pred CCceEEEECCCCCEEEEECCCCEEEEEeCCCCe-EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEE
Confidence 688999999999988888889999999986542 123334 23445689999999 788777776 689999
Q ss_pred EEEeCCCCceeeeeeeec----------cccceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEeeeee--cCCCc
Q psy14815 160 VWEVGEEDEYECAAVINA----------HIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATL--KSHTS 226 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~----------~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~ 226 (479)
+||.. +. ....+.. +-.....++++|+ ++++++...++.|++||..+++. +..+ ..+..
T Consensus 170 ~~~~~-g~---~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~----~~~~~~~~~~~ 241 (329)
T 3fvz_A 170 QFSPS-GK---FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEF----VREIKHASFGR 241 (329)
T ss_dssp EECTT-SC---EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE----EEEECCTTTTT
T ss_pred EEcCC-CC---EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcE----EEEEeccccCC
Confidence 99944 32 2222321 2234789999998 77777777889999999985553 3333 45667
Q ss_pred cEEEEEEcc------CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEe--ccccccEEEEEecCCCCeE
Q psy14815 227 TVWSLAFDR------IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS--GHHGRTIYDISWCHLTDLI 298 (479)
Q Consensus 227 ~v~~~~~~~------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~l~~~~~~~~l 298 (479)
.+..++|+| +++..++...+..|++||.... +.+..+. ..+...+..++++|+|.++
T Consensus 242 ~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g---------------~~~~~~~~~~~~~~~p~~ia~~~dG~ly 306 (329)
T 3fvz_A 242 NVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSG---------------EIIDVFKPVRKHFDMPHDIVASEDGTVY 306 (329)
T ss_dssp CEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTC---------------CEEEEECCSSSCCSSEEEEEECTTSEEE
T ss_pred CcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCC---------------eEEEEEcCCCCccCCeeEEEECCCCCEE
Confidence 788999999 3332333334558999997443 3344442 1125678999999999888
Q ss_pred EEEeCCCeEEEcccCCC
Q psy14815 299 ATACGDDAIRIFKENPE 315 (479)
Q Consensus 299 ~~~~~dg~i~vw~~~~~ 315 (479)
++...++.|++|++...
T Consensus 307 vad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 307 IGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp EEESSSCCEEEEEEEEC
T ss_pred EEECCCCEEEEEeCCcc
Confidence 88888999999998653
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.78 E-value=2.1e-17 Score=154.83 Aligned_cols=235 Identities=8% Similarity=0.039 Sum_probs=158.5
Q ss_pred EEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCC-CcEEEEEEcCCCCEEEE-EeCCCcEEEEEeCCCCceeee
Q psy14815 95 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHE-NEVKSVTWSKNGQFLAT-CSRDKSVWVWEVGEEDEYECA 172 (479)
Q Consensus 95 ~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~l~~-~~~dg~i~vwd~~~~~~~~~~ 172 (479)
.+++++++.++++++.++.|.+||+.+++ ....+..+. ..+..++|+|+++.+++ +..++.|.+||+.+++ ..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~---~~ 78 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDT--VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK---NT 78 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTE--EEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE---EE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCc--EEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc---EE
Confidence 35678888999999999999999999987 344444332 25789999999986654 4568999999998873 33
Q ss_pred eeeec-c-----ccceeEEEEecCCCEEEEEEcC------------CcEEEEecCCcccceEeeeeecCCCccEEEEEEc
Q psy14815 173 AVINA-H-----IQDVKKVRFHPFDNILASASYD------------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD 234 (479)
Q Consensus 173 ~~~~~-~-----~~~v~~l~~~~~~~~l~~~~~d------------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~ 234 (479)
..+.. + ...+.+++|+|+++++++++.+ +.|.+||+.+++.. ..+.... +...+.+++|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~-~~~~~~~~~~s 156 (349)
T 1jmx_B 79 FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA-KPVRTFP-MPRQVYLMRAA 156 (349)
T ss_dssp EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB-CCSEEEE-CCSSCCCEEEC
T ss_pred EEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccc-ceeeecc-CCCcccceeEC
Confidence 33322 1 2337889999999999998865 89999999875421 1122222 33468889999
Q ss_pred cCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCC-----------------CC--Cce-EE--------------------
Q psy14815 235 RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD-----------------ND--SVW-KC-------------------- 274 (479)
Q Consensus 235 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----------------~~--~~~-~~-------------------- 274 (479)
|+++ +++++. .|++||.........++... .. ... .+
T Consensus 157 ~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 233 (349)
T 1jmx_B 157 DDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLY 233 (349)
T ss_dssp TTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEE
T ss_pred CCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccce
Confidence 9999 666543 49999987654322221110 00 000 00
Q ss_pred -------------EEEEeccccccEEEEEecC-CCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeE
Q psy14815 275 -------------VCTLSGHHGRTIYDISWCH-LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNC 340 (479)
Q Consensus 275 -------------~~~~~~~~~~~i~~l~~~~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 340 (479)
...+.. ....+..++|+| ++++++++ ++.|.+||+.+++ ....+. ....+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~---------~~~~~~--~~~~~~~ 299 (349)
T 1jmx_B 234 GYLSVDLKTGKTHTQEFAD-LTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRK---------LIKAAN--LDHTYYC 299 (349)
T ss_dssp EEEEEETTTCCEEEEEEEE-CSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTE---------EEEEEE--CSSCCCE
T ss_pred eEEEEeccCCcEEeccccc-CCCcceeeEecCCCCCEEEEE--cCeEEEEECccCe---------EEEEEc--CCCCccc
Confidence 000011 133577889999 99999888 8899999999876 333332 2335789
Q ss_pred EEecCCCCCCCcc
Q psy14815 341 VAWNPVVPEPQKT 353 (479)
Q Consensus 341 ~~~sp~~~~l~~~ 353 (479)
++|+|++++|...
T Consensus 300 ~~~s~dg~~l~~~ 312 (349)
T 1jmx_B 300 VAFDKKGDKLYLG 312 (349)
T ss_dssp EEECSSSSCEEEE
T ss_pred eEECCCCCEEEEe
Confidence 9999999988653
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.76 E-value=4.9e-17 Score=166.22 Aligned_cols=288 Identities=9% Similarity=-0.007 Sum_probs=182.0
Q ss_pred cccccccccceEEEEECCCCCeEEEe--eCCCcEEEEecccccccccccCC---------------------Cccce-EE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSC--GEDKNIRLWVMVIREPYEKLHGL---------------------PVETS-LR 59 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~--~~dg~v~iwd~~~~~~~~~~~~~---------------------~~~~~-~~ 59 (479)
.+.+.+|...|..++|++++-++++. +.++...||....+.....+..+ |++.. ++
T Consensus 16 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la 95 (662)
T 3azo_A 16 AALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLV 95 (662)
T ss_dssp HHHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEE
T ss_pred HHHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEE
Confidence 35577899999999999887777777 56889999985433322222111 34444 44
Q ss_pred Eeec-CCcEEEecCCCCC-CceeeeEEeccc---cCCcEEEEEECCCCCEEEEEECC----------CeEEEEECCC---
Q psy14815 60 QLVE-DKNIRLWGKESFG-NKFTAKAILSDG---HQRTIRETAWSPCGNFIASASFD----------ATTAVWDKRS--- 121 (479)
Q Consensus 60 ~~~~-~~~i~~w~~~~~~-~~~~~~~~~~~~---~~~~v~~v~~~~~~~~l~t~~~d----------g~i~iwd~~~--- 121 (479)
.... +..|.+++....+ .. ........ |...+.+++|+|||+.|++++.+ ..|++||+.+
T Consensus 96 ~~~~~~~~l~~~~~~~~g~~~--~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 173 (662)
T 3azo_A 96 FTHFGDQRLYAFEPDAPGGAV--PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA 173 (662)
T ss_dssp EEBTTTCCEEEECTTSTTCCC--CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT
T ss_pred EEECCCCeEEEEcCCCCCCCC--CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcc
Confidence 3322 3445555543001 11 11111111 56788999999999999999877 5899999988
Q ss_pred ---CeEEEeEEEe-CCCCcEEEEEEcCCCCEEEEEeCCC--------cEEEEEeC-CCCceeeeeeeeccccceeEEEEe
Q psy14815 122 ---GQFECNATLE-GHENEVKSVTWSKNGQFLATCSRDK--------SVWVWEVG-EEDEYECAAVINAHIQDVKKVRFH 188 (479)
Q Consensus 122 ---~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~~dg--------~i~vwd~~-~~~~~~~~~~~~~~~~~v~~l~~~ 188 (479)
++. ..+. .+...+..++|+|||++|+.++.++ .|.+||+. ++...........+...+..+.|+
T Consensus 174 ~~~~~~---~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~s 250 (662)
T 3azo_A 174 ADRSAV---RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWA 250 (662)
T ss_dssp TCGGGS---EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEEC
T ss_pred ccCCce---eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEEC
Confidence 542 3444 5567788999999999999887553 79999998 342112222333456789999999
Q ss_pred cCCCEEEEEEcCC--cEEEEecCCcccceEeeeeecCCCcc--------EEEEEEccCCCEEEEeeCCCeEEEEeccCCC
Q psy14815 189 PFDNILASASYDD--TVKLFKEDKAEADWINFATLKSHTST--------VWSLAFDRIGSRLATCSDDATVKIWKEYKPG 258 (479)
Q Consensus 189 ~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 258 (479)
|+|++++++..++ .|.+||..+++. ..+ ...+... +..++|+++++.+++++. +.+++|.+....
T Consensus 251 pdg~l~~~~~~~~~~~l~~~~~~~~~~--~~l--~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~ 325 (662)
T 3azo_A 251 PDGSLIVATDRTGWWNLHRVDPATGAA--TQL--CRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPES 325 (662)
T ss_dssp TTSCEEEEECTTSSCEEEEECTTTCCE--EES--SCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTT
T ss_pred CCCeEEEEECCCCCeEEEEEECCCCce--eec--ccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCC
Confidence 9999888888888 556666544432 111 1122211 467899999999999998 999999653221
Q ss_pred CCCCCCCCCCCCceEEEEEEeccccccEEEE-EecCCCCeEEEEeCCCe--EEEcccCCCC
Q psy14815 259 NSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI-SWCHLTDLIATACGDDA--IRIFKENPEA 316 (479)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l-~~~~~~~~l~~~~~dg~--i~vw~~~~~~ 316 (479)
. . +..+..+ ...+..+ +++.+.-++++++.+.. |.+||+.+++
T Consensus 326 ~-------------~-~~~l~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 326 G-------------E-LVDAAGP-WTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp T-------------E-EEECCSS-CCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred C-------------c-EEEecCC-CCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 1 1 3455554 5566666 55433334445555544 4455555543
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.75 E-value=3.7e-16 Score=145.49 Aligned_cols=275 Identities=8% Similarity=0.053 Sum_probs=180.3
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR 91 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 91 (479)
..|.++.|++++..++..+.++.++.|. ++.... ...+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------------------------~~~~~~ 45 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTIT---AEPWLE-------------------------------------ISKKGL 45 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEE---CEEEEE-------------------------------------EESSCC
T ss_pred cccceeeecCCccceeEEeecccCcccc---cceeEE-------------------------------------EeccCc
Confidence 4577788888877777767777788872 111111 123455
Q ss_pred cEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC----CcEEEEEeCCCC
Q psy14815 92 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD----KSVWVWEVGEED 167 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d----g~i~vwd~~~~~ 167 (479)
.+.+++|++++++++++..++.|.+||..+++... ....+...+.+++++++++++++...+ +.|.+||..+..
T Consensus 46 ~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~--~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~ 123 (333)
T 2dg1_A 46 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR--PFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN 123 (333)
T ss_dssp CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE--EEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS
T ss_pred cccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEE--EeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCE
Confidence 67899999999988888889999999999886332 222456789999999999877777666 689999988764
Q ss_pred ceeeeeeeeccccceeEEEEecCCCEEEEEEc------CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE
Q psy14815 168 EYECAAVINAHIQDVKKVRFHPFDNILASASY------DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 241 (479)
...... ...+...+.+++++|+++++++... .+.|..+|..++.. ..+......+..++|+|+++.++
T Consensus 124 ~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~i~~~~dg~~l~ 197 (333)
T 2dg1_A 124 LQDIIE-DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV-----TPIIQNISVANGIALSTDEKVLW 197 (333)
T ss_dssp CEEEEC-SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCE-----EEEEEEESSEEEEEECTTSSEEE
T ss_pred EEEEEc-cCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEE-----EEeecCCCcccceEECCCCCEEE
Confidence 221111 1123456889999999987776653 24566666554332 11222234578899999998665
Q ss_pred -EeeCCCeEEEEeccCCCCCCCCCCCCCCCce--EEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCC
Q psy14815 242 -TCSDDATVKIWKEYKPGNSAGIPTPDNDSVW--KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 318 (479)
Q Consensus 242 -s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 318 (479)
+.+.++.|.+||+....... ... .....+.+ ...+..++++++|.++++...++.|.+|+.+ ++
T Consensus 198 v~~~~~~~i~~~d~~~~g~~~--------~~~~~~~~~~~~~--~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~-- 264 (333)
T 2dg1_A 198 VTETTANRLHRIALEDDGVTI--------QPFGATIPYYFTG--HEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GY-- 264 (333)
T ss_dssp EEEGGGTEEEEEEECTTSSSE--------EEEEEEEEEECCS--SSEEEEEEEBTTCCEEEEEETTTEEEEECTT-SC--
T ss_pred EEeCCCCeEEEEEecCCCcCc--------ccccceEEEecCC--CCCCCceEECCCCCEEEEEcCCCEEEEECCC-CC--
Confidence 44567899999985321110 000 01111222 1367889999999988888888999999984 33
Q ss_pred CCceeeEEEecccc-----ccccceeEEEecCCCCCCCccc
Q psy14815 319 SDMVSFDLVHTEHR-----AHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 319 ~~~~~~~~~~~~~~-----~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.+..+.. +|...+.+++|+||+..|..+.
T Consensus 265 -------~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~ 298 (333)
T 2dg1_A 265 -------PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICS 298 (333)
T ss_dssp -------EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEE
T ss_pred -------EEEEEEcCCCccccccCcceEEECCCCCEEEEEe
Confidence 1222211 1222689999999987775443
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.1e-16 Score=150.48 Aligned_cols=246 Identities=9% Similarity=0.055 Sum_probs=158.1
Q ss_pred cccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 6 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 6 ~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
...+|...+..+.|+|||+.|+.++.++.|.+||+.+++....+
T Consensus 75 lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~------------------------------------ 118 (388)
T 3pe7_A 75 LTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVY------------------------------------ 118 (388)
T ss_dssp CCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEE------------------------------------
T ss_pred eeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeee------------------------------------
Confidence 34456666667889999999999998899999998876543222
Q ss_pred ccccCCcEEEE--EECCCCCEEEEE----------------------ECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEE
Q psy14815 86 SDGHQRTIRET--AWSPCGNFIASA----------------------SFDATTAVWDKRSGQFECNATLEGHENEVKSVT 141 (479)
Q Consensus 86 ~~~~~~~v~~v--~~~~~~~~l~t~----------------------~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~ 141 (479)
..+...+... .++|++.+++.. ..+..|.+||+.+++.. .+..+...+..+.
T Consensus 119 -~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~---~l~~~~~~~~~~~ 194 (388)
T 3pe7_A 119 -QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST---VILQENQWLGHPI 194 (388)
T ss_dssp -ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE---EEEEESSCEEEEE
T ss_pred -echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE---EeecCCccccccE
Confidence 1122223222 347788777643 23468999999998643 3334556789999
Q ss_pred EcC-CCCEEEEEeCC------CcEEEEEeCCCCceeeeeeeeccc--cceeEEEEecCCCEEEEEEc-CC----cEEEEe
Q psy14815 142 WSK-NGQFLATCSRD------KSVWVWEVGEEDEYECAAVINAHI--QDVKKVRFHPFDNILASASY-DD----TVKLFK 207 (479)
Q Consensus 142 ~~~-~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~~~~~~--~~v~~l~~~~~~~~l~~~~~-dg----~i~i~d 207 (479)
|+| +|+.|+....+ ..|.++|...... ..+..+. ..+...+|+|+|+.|+..+. ++ .|.+||
T Consensus 195 ~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~----~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 270 (388)
T 3pe7_A 195 YRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM----RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSAD 270 (388)
T ss_dssp EETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC----EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEEC
T ss_pred ECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce----EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEe
Confidence 999 99988877763 3677778765432 2232333 35778899999997766543 22 399999
Q ss_pred cCCcccceEeeeeecCCCcc---EEEEEEccCCCEEEEe---------eCCCeEEEEeccCCCCCCCCCCCCCCCceEEE
Q psy14815 208 EDKAEADWINFATLKSHTST---VWSLAFDRIGSRLATC---------SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 275 (479)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~l~s~---------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 275 (479)
+.+++. ..+..+..+... ...+.|+|+|+.|+.. ..+..|++||+... + .
T Consensus 271 ~~~g~~--~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~---------------~-~ 332 (388)
T 3pe7_A 271 PETLEN--RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNG---------------T-Q 332 (388)
T ss_dssp TTTCCE--EEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTT---------------E-E
T ss_pred cCCCce--EEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCC---------------c-e
Confidence 988764 233333331111 1113699999988753 45668999998442 1 2
Q ss_pred EEEeccccc-----------cEEEEEecCCCCeEEEEe-CCCeEEEcccCC
Q psy14815 276 CTLSGHHGR-----------TIYDISWCHLTDLIATAC-GDDAIRIFKENP 314 (479)
Q Consensus 276 ~~~~~~~~~-----------~i~~l~~~~~~~~l~~~~-~dg~i~vw~~~~ 314 (479)
..+..+ .. .+.+++|+|||+.|+.++ .+|...+|.++.
T Consensus 333 ~~l~~~-~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 333 HRVARH-DTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp EEEEEC-CCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred EEeccc-cCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 233333 22 477889999999887665 467767775543
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-15 Score=157.37 Aligned_cols=249 Identities=8% Similarity=-0.004 Sum_probs=170.9
Q ss_pred ccccceEEEEECCCCCeEEEeeCCC-----cEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDK-----NIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+|...+..++|||||++||.++.++ .|++||+.+++.....
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~---------------------------------- 167 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV---------------------------------- 167 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE----------------------------------
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccc----------------------------------
Confidence 4555789999999999998776543 7999998876643211
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCe----------------EEEEECCCCeEEEeEEEe--CCCCcEEEEEEcCC
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDAT----------------TAVWDKRSGQFECNATLE--GHENEVKSVTWSKN 145 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~----------------i~iwd~~~~~~~~~~~~~--~~~~~v~~l~~~~~ 145 (479)
. ....+..++|+|||+.|+.++.++. |++|++.+++......+. .+...+..+.|+||
T Consensus 168 ---~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpD 243 (710)
T 2xdw_A 168 ---L-ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDD 243 (710)
T ss_dssp ---E-EEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTT
T ss_pred ---c-cCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCC
Confidence 0 1112567899999999999988766 999999887532222333 34556889999999
Q ss_pred CCEEEEEeC-----CCcEEEEEeCC------CCceeeeeeeeccccceeEEEEecCCCEEEEEEcC----CcEEEEecCC
Q psy14815 146 GQFLATCSR-----DKSVWVWEVGE------EDEYECAAVINAHIQDVKKVRFHPFDNILASASYD----DTVKLFKEDK 210 (479)
Q Consensus 146 ~~~l~~~~~-----dg~i~vwd~~~------~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d----g~i~i~d~~~ 210 (479)
|++|+.++. +..|.+||+.+ +. .....+..+...+.. .|+|+|+.|+..+.. +.|.+||+.+
T Consensus 244 g~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~--~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~ 320 (710)
T 2xdw_A 244 GRYVLLSIREGCDPVNRLWYCDLQQESNGITGI--LKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTD 320 (710)
T ss_dssp SCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSS--CCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTS
T ss_pred CCEEEEEEEccCCCccEEEEEECcccccccCCc--cceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 999888765 56899999976 32 123344455555544 488888887776653 3599999987
Q ss_pred cccceEeeeeecCCCc--cEEEEEEccCCCEEEEeeCCCeEEE--EeccCCCCCCCCCCCCCCCceEEEEEEeccccccE
Q psy14815 211 AEADWINFATLKSHTS--TVWSLAFDRIGSRLATCSDDATVKI--WKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTI 286 (479)
Q Consensus 211 ~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~s~~~dg~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 286 (479)
+... ....+..|.. .+..+.|++++.++++...|+..+| |++..+ +.+..+..+ ...+
T Consensus 321 ~~~~--~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g---------------~~~~~l~~~-~~~v 382 (710)
T 2xdw_A 321 PEES--KWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATG---------------ALLKIFPLE-VGSV 382 (710)
T ss_dssp CCGG--GCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTC---------------CEEEEECCC-SSEE
T ss_pred CCcc--cceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCC---------------CEEEecCCC-CceE
Confidence 6420 1123333433 6888999877778888888886555 454222 234555555 6678
Q ss_pred EEEEecCCCCeEEEE-e---CCCeEEEcccCCCC
Q psy14815 287 YDISWCHLTDLIATA-C---GDDAIRIFKENPEA 316 (479)
Q Consensus 287 ~~l~~~~~~~~l~~~-~---~dg~i~vw~~~~~~ 316 (479)
..++++|+++.++.. + ..++++.||+.+++
T Consensus 383 ~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 383 VGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 899999998765533 2 24789999998765
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.1e-15 Score=137.88 Aligned_cols=248 Identities=12% Similarity=0.080 Sum_probs=166.9
Q ss_pred ccccccccceEEEEECCCCC-eEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 5 QTLKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~-~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+.+..+.....+++|+|+++ +++++..++.|..||..++ ...+
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~---------------------------------- 64 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPE---------------------------------- 64 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEE----------------------------------
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEE----------------------------------
Confidence 45556677889999999998 7788888899999997654 2111
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe-C-CCCcEEEEEEcCCCCEEEE----EeC---
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE-G-HENEVKSVTWSKNGQFLAT----CSR--- 154 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~-~-~~~~v~~l~~~~~~~~l~~----~~~--- 154 (479)
..+...+.+++++++++++++...++.|.+||..+++........ . ....+..++++|+|+++++ |+.
T Consensus 65 ---~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~ 141 (296)
T 3e5z_A 65 ---MHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPE 141 (296)
T ss_dssp ---ESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGG
T ss_pred ---ECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccccc
Confidence 124567899999999998887777789999999888643322111 1 1234678999999998887 331
Q ss_pred --------CCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecC-CcccceEeeeeecCCC
Q psy14815 155 --------DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED-KAEADWINFATLKSHT 225 (479)
Q Consensus 155 --------dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~ 225 (479)
.+.-.+|.+..... ...+..+......++|+|+++.+++.+.++.|.+|++. .+... .....+..+.
T Consensus 142 ~~~~~~~~~~~~~l~~~~~~g~---~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~-~~~~~~~~~~ 217 (296)
T 3e5z_A 142 EGYGGEMELPGRWVFRLAPDGT---LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETE-YQGVHFTVEP 217 (296)
T ss_dssp GSSCCCCCSSSCEEEEECTTSC---EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEE-EEEEEECCSS
T ss_pred ccccccccCCCcEEEEECCCCC---EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCc-CCCeEeeCCC
Confidence 01124444443222 22233445567899999999988777778999999987 32210 0011123355
Q ss_pred ccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEe-cCCCCeEEEEeCC
Q psy14815 226 STVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW-CHLTDLIATACGD 304 (479)
Q Consensus 226 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~-~~~~~~l~~~~~d 304 (479)
..+..++++++|+.+++. ++.|.+||.. .+.+..+..+ .. +.+++| +|+++.|++++.+
T Consensus 218 ~~p~~i~~d~~G~l~v~~--~~~v~~~~~~----------------g~~~~~~~~~-~~-~~~~~f~~~d~~~L~v~t~~ 277 (296)
T 3e5z_A 218 GKTDGLRVDAGGLIWASA--GDGVHVLTPD----------------GDELGRVLTP-QT-TSNLCFGGPEGRTLYMTVST 277 (296)
T ss_dssp SCCCSEEEBTTSCEEEEE--TTEEEEECTT----------------SCEEEEEECS-SC-CCEEEEESTTSCEEEEEETT
T ss_pred CCCCeEEECCCCCEEEEc--CCeEEEECCC----------------CCEEEEEECC-CC-ceeEEEECCCCCEEEEEcCC
Confidence 566789999999866655 7889999963 2345566654 44 889999 5888888888765
Q ss_pred CeEEEcccCCCC
Q psy14815 305 DAIRIFKENPEA 316 (479)
Q Consensus 305 g~i~vw~~~~~~ 316 (479)
.+.-++.++..
T Consensus 278 -~l~~~~~~~~~ 288 (296)
T 3e5z_A 278 -EFWSIETNVRG 288 (296)
T ss_dssp -EEEEEECSCCB
T ss_pred -eEEEEEccccc
Confidence 44444555443
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.72 E-value=1.4e-14 Score=134.85 Aligned_cols=243 Identities=9% Similarity=-0.021 Sum_probs=161.0
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEE
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAI 84 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~ 84 (479)
..+.++...+.+++|+|+|++++++..++.|.+||..+++.....
T Consensus 38 ~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~----------------------------------- 82 (333)
T 2dg1_A 38 LEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF----------------------------------- 82 (333)
T ss_dssp EEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE-----------------------------------
T ss_pred EEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe-----------------------------------
Confidence 345566777899999999998888888899999997655432110
Q ss_pred eccccCCcEEEEEECCCCCEEEEEECC----CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC------
Q psy14815 85 LSDGHQRTIRETAWSPCGNFIASASFD----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR------ 154 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~~~~l~t~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~------ 154 (479)
..+...+.+++++|+++++++...+ +.|.+||..++.......-..+...+.++.++|+++++++...
T Consensus 83 --~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~ 160 (333)
T 2dg1_A 83 --VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNP 160 (333)
T ss_dssp --ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBC
T ss_pred --eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCC
Confidence 1245679999999999888877766 6899999988763312111124457899999999987776653
Q ss_pred CCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEE-EEcCCcEEEEecCCcccceE-----eeeeecCCCccE
Q psy14815 155 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS-ASYDDTVKLFKEDKAEADWI-----NFATLKSHTSTV 228 (479)
Q Consensus 155 dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~-----~~~~~~~~~~~v 228 (479)
.+.|..+|..+.+ .. .+......+..++|+|+++.|+. .+.++.|.+||......... ....+..+ ..+
T Consensus 161 ~~~l~~~~~~~~~-~~---~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~ 235 (333)
T 2dg1_A 161 LGGVYYVSPDFRT-VT---PIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGP 235 (333)
T ss_dssp CEEEEEECTTSCC-EE---EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEE
T ss_pred CceEEEEeCCCCE-EE---EeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCC
Confidence 2445555544332 11 22223345788999999986654 45678999999964211111 11112222 467
Q ss_pred EEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccc-----ccEEEEEecCCCCeEEEEeC
Q psy14815 229 WSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG-----RTIYDISWCHLTDLIATACG 303 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~i~~l~~~~~~~~l~~~~~ 303 (479)
..++++++|+.+++...++.|.+||.. . +.+..+..... ..+.+++|+|+++.|+.++.
T Consensus 236 ~~i~~d~~G~l~v~~~~~~~v~~~d~~-g---------------~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~ 299 (333)
T 2dg1_A 236 DSCCIDSDDNLYVAMYGQGRVLVFNKR-G---------------YPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN 299 (333)
T ss_dssp EEEEEBTTCCEEEEEETTTEEEEECTT-S---------------CEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred CceEECCCCCEEEEEcCCCEEEEECCC-C---------------CEEEEEEcCCCccccccCcceEEECCCCCEEEEEeC
Confidence 889999999988877778999999862 1 22334433211 15889999999877766555
Q ss_pred CC
Q psy14815 304 DD 305 (479)
Q Consensus 304 dg 305 (479)
++
T Consensus 300 ~g 301 (333)
T 2dg1_A 300 DI 301 (333)
T ss_dssp CG
T ss_pred cc
Confidence 53
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.71 E-value=6.2e-15 Score=137.95 Aligned_cols=205 Identities=11% Similarity=0.122 Sum_probs=137.7
Q ss_pred CcEEEEEECCCCCEEEEEECC---C--eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC----------
Q psy14815 91 RTIRETAWSPCGNFIASASFD---A--TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD---------- 155 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~d---g--~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d---------- 155 (479)
..+..++|+|||++|+.++.+ + .|.+||+.+++...+... .. +..+.|+|||+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~---~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~ 134 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA---KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFE 134 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE---SE-EEEEEECTTSSEEEEEEECCCC-------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC---CC-ccceeECCCCCEEEEEEccCCCcCCcEEE
Confidence 457889999999999988754 3 488889988864333322 23 8999999999988888642
Q ss_pred -----------------CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCC-------cEEEEecCCc
Q psy14815 156 -----------------KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD-------TVKLFKEDKA 211 (479)
Q Consensus 156 -----------------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg-------~i~i~d~~~~ 211 (479)
..|.+||+.+++ ....+.. . .+..+.|+|+| +++++..++ ...+|.++++
T Consensus 135 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~---~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~ 208 (347)
T 2gop_A 135 DDVPAWFDDLGFFDGEKTTFWIFDTESEE---VIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDG 208 (347)
T ss_dssp --CCCC---------CEEEEEEEETTTTE---EEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETT
T ss_pred cccceeecCcccccCccceEEEEECCCCe---EEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCC
Confidence 568899998763 2122333 3 78899999999 777776542 4455554432
Q ss_pred ccceEeeeeecCCCccEEEEEEccCCCEEEEeeCC--------CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccc
Q psy14815 212 EADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD--------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 283 (479)
Q Consensus 212 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (479)
+ ...+..+ ..+..+ +|+|++|+.++.+ ..|.+|| .. . ...+...+.
T Consensus 209 ~-----~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~-~---------------~~~l~~~~~ 262 (347)
T 2gop_A 209 K-----EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GK-E---------------VMGILDEVD 262 (347)
T ss_dssp E-----EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SS-C---------------EEESSTTCC
T ss_pred c-----eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CC-c---------------eEeccccCC
Confidence 2 1222223 445544 9999998877754 3577776 11 1 122222235
Q ss_pred ccEEE-EEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecC
Q psy14815 284 RTIYD-ISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 345 (479)
Q Consensus 284 ~~i~~-l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp 345 (479)
..+.. +.|+ ++ ++++++.++.+++| +..++ ...+. .+...|.+++|+|
T Consensus 263 ~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~----------~~~~~-~~~~~v~~~~~s~ 311 (347)
T 2gop_A 263 RGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGE----------IKPIA-KGRHWIMGFDVDE 311 (347)
T ss_dssp SEEEEEEEET-TE-EEEEEEETTEEEEE-EESSS----------EEEEE-CSSSEEEEEEESS
T ss_pred cccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCc----------eEEEe-cCCCeEEeeeeeC
Confidence 57776 8999 88 99999999999999 87443 22222 3467889999999
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.71 E-value=8.5e-16 Score=157.63 Aligned_cols=248 Identities=11% Similarity=0.024 Sum_probs=166.5
Q ss_pred ccccceEEEEECCCCCeEE-----EeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 9 GHQGRVWNVSWNPQGTMIS-----SCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~-----t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+|...+.+++|||||++|| .|+.+.+|++||+.+++.+....
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~--------------------------------- 164 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDV--------------------------------- 164 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCC---------------------------------
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcc---------------------------------
Confidence 5666899999999999998 45556789999998877531000
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCe-------------EEEEECCCCeEE--EeEEEeCCCCcEEEEEEcCCCCE
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDAT-------------TAVWDKRSGQFE--CNATLEGHENEVKSVTWSKNGQF 148 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~-------------i~iwd~~~~~~~--~~~~~~~~~~~v~~l~~~~~~~~ 148 (479)
... .....++|+|||+.|+.++.|.. |++|++.+++.. .+.....+...+.++.|+|||++
T Consensus 165 --~~~--~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~ 240 (695)
T 2bkl_A 165 --IEG--GKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKY 240 (695)
T ss_dssp --BSC--CTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCC
T ss_pred --cCc--ccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCE
Confidence 000 11156899999999999998776 999999887522 33333345567899999999999
Q ss_pred EEEEeCCC----cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc----CCcEEEEecCCccc-ceEeee
Q psy14815 149 LATCSRDK----SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY----DDTVKLFKEDKAEA-DWINFA 219 (479)
Q Consensus 149 l~~~~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~----dg~i~i~d~~~~~~-~~~~~~ 219 (479)
|+.++.++ .|.+|+..++ ....+..+...+....+ ++++ ++..+. ++.|.+||+.++.. .+..+
T Consensus 241 l~~~~~~~~~~~~l~~~~~~~~----~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l- 313 (695)
T 2bkl_A 241 LFVYILRGWSENDVYWKRPGEK----DFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEI- 313 (695)
T ss_dssp EEEEEEETTTEEEEEEECTTCS----SCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEE-
T ss_pred EEEEEeCCCCceEEEEEcCCCC----ceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEE-
Confidence 88887665 5666654333 12334444555566666 5666 444443 57899999976542 11221
Q ss_pred eecCC-CccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeE
Q psy14815 220 TLKSH-TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI 298 (479)
Q Consensus 220 ~~~~~-~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l 298 (479)
+..+ ...+..++|+ ++..+++...|+..++|.+.... .....+..+....+..++++|+++.+
T Consensus 314 -~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g--------------~~~~~l~~~~~~~v~~~~~s~d~~~l 377 (695)
T 2bkl_A 314 -VPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKG--------------KPVRTVQLPGVGAASNLMGLEDLDDA 377 (695)
T ss_dssp -ECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC--------------CEEEECCCSSSSEECCCBSCTTCSEE
T ss_pred -ecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCC--------------CeeEEecCCCCeEEEEeecCCCCCEE
Confidence 2222 4567888888 67788888999999998764221 22344444335578888999998866
Q ss_pred EEEe----CCCeEEEcccCCCC
Q psy14815 299 ATAC----GDDAIRIFKENPEA 316 (479)
Q Consensus 299 ~~~~----~dg~i~vw~~~~~~ 316 (479)
+... ..++|++||+.+++
T Consensus 378 ~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 378 YYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp EEEEEETTEEEEEEEEETTTCC
T ss_pred EEEEcCCCCCCEEEEEECCCCc
Confidence 6332 34789999998765
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.69 E-value=1.4e-15 Score=157.21 Aligned_cols=237 Identities=15% Similarity=0.186 Sum_probs=154.9
Q ss_pred CccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC-----cEEEEEECCCCCEEEEEECC---------CeEEEEE
Q psy14815 53 PVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR-----TIRETAWSPCGNFIASASFD---------ATTAVWD 118 (479)
Q Consensus 53 ~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~-----~v~~v~~~~~~~~l~t~~~d---------g~i~iwd 118 (479)
+++..+++. ++.|.+|+....... ....+|.. ....++|||||++|+.++.+ +.+.+||
T Consensus 26 ~dg~~~~~~--~~~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d 98 (740)
T 4a5s_A 26 SDHEYLYKQ--ENNILVFNAEYGNSS-----VFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD 98 (740)
T ss_dssp SSSEEEEEE--TTEEEEEETTTCCEE-----EEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred CCCcEEEEc--CCcEEEEECCCCceE-----EEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEE
Confidence 445444443 899999998853321 12233332 23458899999999999876 5677999
Q ss_pred CCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeecccc-----------------c
Q psy14815 119 KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ-----------------D 181 (479)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-----------------~ 181 (479)
+.+++. ..+..+...+...+|||||+.|+.+ .++.|++||+.++...+. +..++.. .
T Consensus 99 ~~~~~~---~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~l--t~~g~~~~~~~g~~~~v~~ee~~~~ 172 (740)
T 4a5s_A 99 LNKRQL---ITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRI--TWTGKEDIIYNGITDWVYEEEVFSA 172 (740)
T ss_dssp TTTTEE---CCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEEC--CSCCBTTTEEESBCCHHHHHHTSSS
T ss_pred CCCCcE---EEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEE--cCCCCccceecCcccccccchhcCC
Confidence 999963 3456677889999999999999888 468999999987643221 1122221 1
Q ss_pred eeEEEEecCCCEEEEEEcCC------------------------------------cEEEEecCC---cccceEeeeeec
Q psy14815 182 VKKVRFHPFDNILASASYDD------------------------------------TVKLFKEDK---AEADWINFATLK 222 (479)
Q Consensus 182 v~~l~~~~~~~~l~~~~~dg------------------------------------~i~i~d~~~---~~~~~~~~~~~~ 222 (479)
...+.|||||+.|+.++.|. .|++||+.+ ++.. ....+.
T Consensus 173 ~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~--~~~~l~ 250 (740)
T 4a5s_A 173 YSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNA--TSIQIT 250 (740)
T ss_dssp SBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCC--CEEEEC
T ss_pred CcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcc--eEEEec
Confidence 23589999999999876332 477788876 5210 012222
Q ss_pred ------CCCccEEEEEEccCCCEEEEee----CCCeEEEEeccCCCCCCCCCCCCCCCceEEE--EEE--eccccccE--
Q psy14815 223 ------SHTSTVWSLAFDRIGSRLATCS----DDATVKIWKEYKPGNSAGIPTPDNDSVWKCV--CTL--SGHHGRTI-- 286 (479)
Q Consensus 223 ------~~~~~v~~~~~~~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~i-- 286 (479)
+|...+..++|+|||+.++... .+..|++||+..+... +.+. ..+ .++ ...|
T Consensus 251 ~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~-----------~~~~~~~~l~~~~~-~~~v~~ 318 (740)
T 4a5s_A 251 APASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGR-----------WNCLVARQHIEMST-TGWVGR 318 (740)
T ss_dssp CCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTE-----------EEECGGGCEEEECS-SSCSSS
T ss_pred CCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccc-----------cceeEEEEeeeccC-CceEcc
Confidence 3778899999999999666543 2347999998765410 0000 001 222 3333
Q ss_pred ---EEEEecCCCCeEE-EEeC-C--CeEEEcccCCCC
Q psy14815 287 ---YDISWCHLTDLIA-TACG-D--DAIRIFKENPEA 316 (479)
Q Consensus 287 ---~~l~~~~~~~~l~-~~~~-d--g~i~vw~~~~~~ 316 (479)
....|+|||+.|+ ..+. + ..|++|+...++
T Consensus 319 ~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~ 355 (740)
T 4a5s_A 319 FRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKD 355 (740)
T ss_dssp SSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSS
T ss_pred CcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCc
Confidence 3678999999876 6654 3 458888887765
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.69 E-value=2e-14 Score=134.42 Aligned_cols=223 Identities=11% Similarity=0.099 Sum_probs=148.2
Q ss_pred cceEEEEECCCCCeEEEeeCC---Cc--EEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 12 GRVWNVSWNPQGTMISSCGED---KN--IRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~d---g~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
..+.+++|||||++|+.++.+ +. |.+|++.+++....
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l-------------------------------------- 100 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKI-------------------------------------- 100 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEE--------------------------------------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEE--------------------------------------
Confidence 457789999999999887653 33 55566554332111
Q ss_pred cccCCcEEEEEECCCCCEEEEEECC---------------------------CeEEEEECCCCeEEEeEEEeCCCCcEEE
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFD---------------------------ATTAVWDKRSGQFECNATLEGHENEVKS 139 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~d---------------------------g~i~iwd~~~~~~~~~~~~~~~~~~v~~ 139 (479)
..+.. +..++|+|+++.|+.++.+ ..|.+||+.+++. ...+.. . .+..
T Consensus 101 ~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~--~~~l~~-~-~~~~ 175 (347)
T 2gop_A 101 LEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV--IEEFEK-P-RFSS 175 (347)
T ss_dssp EEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE--EEEEEE-E-TTCE
T ss_pred EcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE--EeeecC-C-Cccc
Confidence 11223 8899999999999888642 5799999998874 122222 2 6789
Q ss_pred EEEcCCCCEEEEEeCCC-------cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcC--------CcEE
Q psy14815 140 VTWSKNGQFLATCSRDK-------SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD--------DTVK 204 (479)
Q Consensus 140 l~~~~~~~~l~~~~~dg-------~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d--------g~i~ 204 (479)
+.|+|+| +++++..++ ...+|.+.++ . ...+..+ ..+..+ +|+|+.|+.++.+ ..|.
T Consensus 176 ~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~-~---~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~ 247 (347)
T 2gop_A 176 GIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDG-K---EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLY 247 (347)
T ss_dssp EEEETTE-EEEEEECCCSSCCSSCCEEEEEEETT-E---EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEE
T ss_pred ccCCCCe-EEEEEecccccccccccccEEEeCCC-c---eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEE
Confidence 9999999 877776542 4456655532 2 2223333 444444 9999988887754 3677
Q ss_pred EEecCCcccceEeeeeecCCCccEEE-EEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccc
Q psy14815 205 LFKEDKAEADWINFATLKSHTSTVWS-LAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 283 (479)
Q Consensus 205 i~d~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (479)
+|| +++. ......+...+.. +.|+ ++ .+++++.++.+++| +. ... . ..+..+ .
T Consensus 248 ~~d--~~~~----~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~-~g~--------------~-~~~~~~-~ 301 (347)
T 2gop_A 248 IYD--GKEV----MGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IW-DGE--------------I-KPIAKG-R 301 (347)
T ss_dssp EEC--SSCE----EESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EE-SSS--------------E-EEEECS-S
T ss_pred EEC--CCce----EeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-Ec-CCc--------------e-EEEecC-C
Confidence 787 3321 2233456677886 9999 88 88899999999999 86 211 1 222333 5
Q ss_pred ccEEEEEecCCCCeEEEEeCCCeE-EEcccC
Q psy14815 284 RTIYDISWCHLTDLIATACGDDAI-RIFKEN 313 (479)
Q Consensus 284 ~~i~~l~~~~~~~~l~~~~~dg~i-~vw~~~ 313 (479)
..|.+++|+| .++++++.++.. .+|.++
T Consensus 302 ~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 302 HWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp SEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred CeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 6899999999 677777777654 777665
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.7e-14 Score=129.89 Aligned_cols=240 Identities=11% Similarity=0.059 Sum_probs=165.8
Q ss_pred ceEEEEECCCCCeEE-EeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC
Q psy14815 13 RVWNVSWNPQGTMIS-SCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR 91 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~-t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 91 (479)
...+++++++|++++ +.+.++.|.+||..+..... + ...+..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~-~------------------------------------~~~~~~ 67 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV-L------------------------------------PFNGLY 67 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EE-C------------------------------------CCCSCC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccce-E------------------------------------eeCCcC
Confidence 778999999999777 54678899999864332110 0 012234
Q ss_pred cEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe-CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCcee
Q psy14815 92 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE-GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 170 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 170 (479)
.+.+++++++++++++.. ++.|.+||..+... ..+. .....+.+++++++++.+++...++.|.+|+..+...
T Consensus 68 ~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~---~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~-- 141 (270)
T 1rwi_B 68 QPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ---TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ-- 141 (270)
T ss_dssp SCCCEEECTTCCEEEEET-TTEEEEECTTCSCC---EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC--
T ss_pred CcceeEECCCCCEEEEcC-CCEEEEEeCCCceE---eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee--
Confidence 567899999998666655 88999999877642 2222 2235689999999998777777788999997554321
Q ss_pred eeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEE
Q psy14815 171 CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 250 (479)
Q Consensus 171 ~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 250 (479)
..........+.+++++++++++++...++.|.+||...... ......+...+.+++++++|..+++...++.|.
T Consensus 142 -~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~----~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~ 216 (270)
T 1rwi_B 142 -TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ----VVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVV 216 (270)
T ss_dssp -EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE----EECCCSSCCSEEEEEECTTCCEEEEETTTSCEE
T ss_pred -EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce----EeecccCCCCceEEEECCCCCEEEEECCCCcEE
Confidence 111122234578899999999777777788999999876542 112223336788999999997777777788999
Q ss_pred EEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 251 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 251 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+|+...... ..........+.+++++++|+++++...++.|++++....+
T Consensus 217 ~~~~~~~~~----------------~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 217 KLLAGSTTS----------------TVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EECTTCSCC----------------EECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred EEcCCCCcc----------------eeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 999743211 11111113568899999999988888899999999987765
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.5e-12 Score=118.73 Aligned_cols=271 Identities=8% Similarity=-0.020 Sum_probs=185.1
Q ss_pred ccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 7 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
+..+...+.+++++++|+++++...++.|.+||.. ++. ..+ ..
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~-~~~-----------------------------------~~ 52 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKI-TEY-----------------------------------PL 52 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-EEE-----------------------------------EC
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCe-EEe-----------------------------------cC
Confidence 44566789999999999988877668889999865 321 111 01
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCC
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 166 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~ 166 (479)
......+.++++.+++.+.++...++.|..||.. ++. ....+......+.++++.++++++++...++.|..||. ++
T Consensus 53 ~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g 129 (299)
T 2z2n_A 53 PTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DG 129 (299)
T ss_dssp SSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TC
T ss_pred CcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CC
Confidence 1234678899999999888877778899999986 432 22223334567899999999987777777889999998 43
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCC
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD 246 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 246 (479)
.. . ..........+..++++++++++++...++.|..||. ++.. . ..........+..++++++++.+++...+
T Consensus 130 ~~-~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~--~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 203 (299)
T 2z2n_A 130 KI-R-EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDI--T-EFKIPTPASGPVGITKGNDDALWFVEIIG 203 (299)
T ss_dssp CE-E-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE--E-EEECSSTTCCEEEEEECTTSSEEEEETTT
T ss_pred CE-E-EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcE--E-EeeCCCCCCcceeEEECCCCCEEEEccCC
Confidence 21 1 1112223456889999999988777767789999998 4432 1 11233345668899999999877766668
Q ss_pred CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEE
Q psy14815 247 ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 326 (479)
Q Consensus 247 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~ 326 (479)
+.|.+||. .... .. ..... ....+.+++++++|.++++...++.|..|+.. +. .
T Consensus 204 ~~i~~~~~-~g~~-------------~~-~~~~~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~---------~ 257 (299)
T 2z2n_A 204 NKIGRITT-SGEI-------------TE-FKIPT-PNARPHAITAGAGIDLWFTEWGANKIGRLTSN-NI---------I 257 (299)
T ss_dssp TEEEEECT-TCCE-------------EE-EECSS-TTCCEEEEEECSTTCEEEEETTTTEEEEEETT-TE---------E
T ss_pred ceEEEECC-CCcE-------------EE-EECCC-CCCCceeEEECCCCCEEEeccCCceEEEECCC-Cc---------e
Confidence 88999986 2210 11 11222 24578899999999877776678899999983 32 1
Q ss_pred EeccccccccceeEEEecCCCCCC
Q psy14815 327 VHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 327 ~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
.......+...+.++++ +++...
T Consensus 258 ~~~~~~~~~~~~~~i~~-~~g~l~ 280 (299)
T 2z2n_A 258 EEYPIQIKSAEPHGICF-DGETIW 280 (299)
T ss_dssp EEEECSSSSCCEEEEEE-CSSCEE
T ss_pred EEEeCCCCCCccceEEe-cCCCEE
Confidence 11112234467888888 777654
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=4.5e-14 Score=145.22 Aligned_cols=234 Identities=11% Similarity=0.055 Sum_probs=159.6
Q ss_pred ccCCcEEEEEECCCCCEEEEEECCC-----eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc-----
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFDA-----TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS----- 157 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~----- 157 (479)
++...+..++|||||++|+.+..++ .|++||+.+++.... .+.. ..+.+++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~-~~~~--~~~~~~~wspDg~~l~~~~~~~~~~~~~ 198 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD-VLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSD 198 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE-EEEE--ECSCCEEECTTSSEEEEEECCCCSSCCS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcc-cccC--cccceEEEEeCCCEEEEEEECCcccccc
Confidence 3445788999999999998876543 899999999974432 2221 22568999999999999988766
Q ss_pred -----------EEEEEeCCCCce-eeeeeeeccccceeEEEEecCCCEEEEEEc-----CCcEEEEecCC------cccc
Q psy14815 158 -----------VWVWEVGEEDEY-ECAAVINAHIQDVKKVRFHPFDNILASASY-----DDTVKLFKEDK------AEAD 214 (479)
Q Consensus 158 -----------i~vwd~~~~~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-----dg~i~i~d~~~------~~~~ 214 (479)
|++|++.++... ..+.....+...+..+.|+|+|++|+.++. +..|.+||+.+ +..
T Consensus 199 ~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~- 277 (710)
T 2xdw_A 199 GTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL- 277 (710)
T ss_dssp SSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC-
T ss_pred ccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc-
Confidence 999999876421 122222234555788999999999988775 56899999976 321
Q ss_pred eEeeeeecCCCccEEEEEEccCCCEEEEeeCC----CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccc-ccEEEE
Q psy14815 215 WINFATLKSHTSTVWSLAFDRIGSRLATCSDD----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG-RTIYDI 289 (479)
Q Consensus 215 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~l 289 (479)
....+..+...+.. .|+++|+.|+..+.+ +.|.+||+..+.. ..+ ..+..+.. ..+..+
T Consensus 278 --~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~----------~~~---~~l~~~~~~~~~~~~ 341 (710)
T 2xdw_A 278 --KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEE----------SKW---KVLVPEHEKDVLEWV 341 (710)
T ss_dssp --CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCG----------GGC---EEEECCCSSCEEEEE
T ss_pred --ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCc----------ccc---eeccCCCCCCeEEEE
Confidence 13334445555544 488899888766543 3699999754421 012 22333323 368889
Q ss_pred EecCCCCeEEEEeCCCe--EEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCC
Q psy14815 290 SWCHLTDLIATACGDDA--IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 290 ~~~~~~~~l~~~~~dg~--i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 351 (479)
+|++++.++++...|+. |++|++.+++ ....+ ..+.+.+..++++|+++.+.
T Consensus 342 ~~~~~~~lv~~~~~~g~~~l~~~~~~~g~---------~~~~l-~~~~~~v~~~~~s~d~~~l~ 395 (710)
T 2xdw_A 342 ACVRSNFLVLCYLHDVKNTLQLHDLATGA---------LLKIF-PLEVGSVVGYSGQKKDTEIF 395 (710)
T ss_dssp EEETTTEEEEEEEETTEEEEEEEETTTCC---------EEEEE-CCCSSEEEEEECCTTCSEEE
T ss_pred EEEcCCEEEEEEEECCEEEEEEEECCCCC---------EEEec-CCCCceEEEEecCCCCCEEE
Confidence 99988888888888885 5556664554 22332 34567788999999987663
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=4.2e-14 Score=131.26 Aligned_cols=229 Identities=11% Similarity=0.082 Sum_probs=161.4
Q ss_pred cCCcEEEEEECCCCCEEEEEECC------------------------CeEEEEECCCCeEEEeEEEe-CCCCcEEEEEEc
Q psy14815 89 HQRTIRETAWSPCGNFIASASFD------------------------ATTAVWDKRSGQFECNATLE-GHENEVKSVTWS 143 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~d------------------------g~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~~ 143 (479)
.-..+.+++++|+|+++++...+ +.|.+||..+++. ...+. .+-.....++++
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~--~~~~~~~~~~~p~gia~d 99 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEI--LQSSGKNLFYLPHGLSID 99 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCE--EEEECTTTCSSEEEEEEC
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeE--EeccCCCccCCceEEEEC
Confidence 34689999999999999888777 4799999988873 33333 344578999999
Q ss_pred CCCCEEEEEeCCCcEEEEEeCCCCceeeeeee---------eccccceeEEEEec-CCCEEEEEE-cCCcEEEEecCCcc
Q psy14815 144 KNGQFLATCSRDKSVWVWEVGEEDEYECAAVI---------NAHIQDVKKVRFHP-FDNILASAS-YDDTVKLFKEDKAE 212 (479)
Q Consensus 144 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~---------~~~~~~v~~l~~~~-~~~~l~~~~-~dg~i~i~d~~~~~ 212 (479)
++|+++++...++.|++||..... ..+..+ ..+......++++| +++++++.+ .++.|++||.. +.
T Consensus 100 ~~g~l~v~d~~~~~v~~~~~~g~~--~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~-g~ 176 (329)
T 3fvz_A 100 TDGNYWVTDVALHQVFKLDPHSKE--GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS-GK 176 (329)
T ss_dssp TTSCEEEEETTTTEEEEECTTCSS--CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT-SC
T ss_pred CCCCEEEEECCCCEEEEEeCCCCe--EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC-CC
Confidence 999988888888999999986542 122222 23334678999999 788888876 68999999954 32
Q ss_pred cceEeeeeec----------CCCccEEEEEEccC-CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc
Q psy14815 213 ADWINFATLK----------SHTSTVWSLAFDRI-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH 281 (479)
Q Consensus 213 ~~~~~~~~~~----------~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (479)
. +..+. .+......++++|+ +..+++...++.|++||...+ +.+..+...
T Consensus 177 ~----~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G---------------~~~~~~~~~ 237 (329)
T 3fvz_A 177 F----VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTK---------------EFVREIKHA 237 (329)
T ss_dssp E----EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTC---------------CEEEEECCT
T ss_pred E----EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCC---------------cEEEEEecc
Confidence 2 22222 12234789999998 666677778899999997422 334444321
Q ss_pred -ccccEEEEEecC------CCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccc--cccccceeEEEecCCCCCC
Q psy14815 282 -HGRTIYDISWCH------LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH--RAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 282 -~~~~i~~l~~~~------~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~sp~~~~l 350 (479)
....+..++|+| ++..+++...+..|++|+..+++ ++..+. .++...+..++++|+|..+
T Consensus 238 ~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~---------~~~~~~~~~~~~~~p~~ia~~~dG~ly 306 (329)
T 3fvz_A 238 SFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGE---------IIDVFKPVRKHFDMPHDIVASEDGTVY 306 (329)
T ss_dssp TTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCC---------EEEEECCSSSCCSSEEEEEECTTSEEE
T ss_pred ccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCe---------EEEEEcCCCCccCCeeEEEECCCCCEE
Confidence 256788899999 33333334445689999998887 333321 3566778999999999543
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.66 E-value=9e-14 Score=126.26 Aligned_cols=228 Identities=9% Similarity=0.094 Sum_probs=158.8
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe------CCCCcEEEEEEc-CCCCEEEEEeC-CCcE
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE------GHENEVKSVTWS-KNGQFLATCSR-DKSV 158 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~------~~~~~v~~l~~~-~~~~~l~~~~~-dg~i 158 (479)
.++-..+.++++++++.++++...++.|.+||.... ....+. .+...+.++++. ++++++++... ++.|
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~---~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i 102 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGR---FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQI 102 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSC---EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCCCc---EEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEE
Confidence 355678999999999998888888999999998743 233332 234578899994 66665555533 7899
Q ss_pred EEEEeCCCCceeeeeeee-ccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeee--cCCCccEEEEEEcc
Q psy14815 159 WVWEVGEEDEYECAAVIN-AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL--KSHTSTVWSLAFDR 235 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~~v~~~~~~~ 235 (479)
.+||. +++ ....+. .+...+.+++++|+++++++...++.|.+||..... ...+ ..+...+..+++++
T Consensus 103 ~~~d~-~g~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~-----~~~~~~~~~~~~p~~i~~~~ 173 (286)
T 1q7f_A 103 QIYNQ-YGQ---FVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNV-----LHKFGCSKHLEFPNGVVVND 173 (286)
T ss_dssp EEECT-TSC---EEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCE-----EEEEECTTTCSSEEEEEECS
T ss_pred EEECC-CCc---EEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCE-----EEEeCCCCccCCcEEEEECC
Confidence 99994 432 222232 233567899999999988887788999999965321 2222 24456789999999
Q ss_pred CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc-ccccEEEEEecCCCCeEEEEeCCC-eEEEcccC
Q psy14815 236 IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGRTIYDISWCHLTDLIATACGDD-AIRIFKEN 313 (479)
Q Consensus 236 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~dg-~i~vw~~~ 313 (479)
+++.+++.+.++.|++||... ..+..+... ....+..++++++|.++++...++ .|.+|+..
T Consensus 174 ~g~l~v~~~~~~~i~~~~~~g----------------~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 174 KQEIFISDNRAHCVKVFNYEG----------------QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp SSEEEEEEGGGTEEEEEETTC----------------CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred CCCEEEEECCCCEEEEEcCCC----------------CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 998888777889999999621 223344332 125688999999999888888776 99999964
Q ss_pred CCCCCCCceeeEEEecccc-ccccceeEEEecCCCCCCCc
Q psy14815 314 PEAGDSDMVSFDLVHTEHR-AHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~l~~ 352 (479)
... +..+.. .....+.+++++|+|+.+..
T Consensus 238 g~~----------~~~~~~~~~~~~~~~i~~~~~g~l~vs 267 (286)
T 1q7f_A 238 GQL----------ISALESKVKHAQCFDVALMDDGSVVLA 267 (286)
T ss_dssp SCE----------EEEEEESSCCSCEEEEEEETTTEEEEE
T ss_pred CCE----------EEEEcccCCCCcceeEEECCCCcEEEE
Confidence 322 222211 12234778999999975543
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.65 E-value=5.6e-14 Score=128.33 Aligned_cols=230 Identities=11% Similarity=0.038 Sum_probs=158.3
Q ss_pred ccCCcEEEEEECCCCC-EEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCC
Q psy14815 88 GHQRTIRETAWSPCGN-FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 166 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~ 166 (479)
.+.....+++|+|+++ +++++..++.|..||..++ . ..+..+...+.+++++++|+++++...++.|.+||..++
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~---~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g 100 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L---SPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGG 100 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E---EEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTC
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e---EEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCC
Confidence 3456778999999998 7788888999999999877 2 344456678999999999998777766789999999766
Q ss_pred Cceeeeeeeec-cccceeEEEEecCCCEEEEE----Ec-------------CCcEEEEecCCcccceEeeeeecCCCccE
Q psy14815 167 DEYECAAVINA-HIQDVKKVRFHPFDNILASA----SY-------------DDTVKLFKEDKAEADWINFATLKSHTSTV 228 (479)
Q Consensus 167 ~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~~~----~~-------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v 228 (479)
+.......... ....+..++++|+|+++++. +. .+.|..++.. +. ...+..+....
T Consensus 101 ~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-----~~~~~~~~~~~ 174 (296)
T 3e5z_A 101 EWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-----LSAPIRDRVKP 174 (296)
T ss_dssp CEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-----EEEEECCCSSE
T ss_pred cEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-----EEEeecCCCCC
Confidence 42211111111 12346789999999988873 31 3456556554 22 22334455677
Q ss_pred EEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCce-EEEEEEeccccccEEEEEecCCCCeEEEEeCCCeE
Q psy14815 229 WSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW-KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAI 307 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i 307 (479)
..++|+|+++.+++.+.++.|.+|++..... . .....+.. ....+..++++++|.++++. ++.|
T Consensus 175 ~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~------------~~~~~~~~~~-~~~~p~~i~~d~~G~l~v~~--~~~v 239 (296)
T 3e5z_A 175 NGLAFLPSGNLLVSDTGDNATHRYCLNARGE------------TEYQGVHFTV-EPGKTDGLRVDAGGLIWASA--GDGV 239 (296)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEEEECSSSC------------EEEEEEEECC-SSSCCCSEEEBTTSCEEEEE--TTEE
T ss_pred ccEEECCCCCEEEEeCCCCeEEEEEECCCCc------------CcCCCeEeeC-CCCCCCeEEECCCCCEEEEc--CCeE
Confidence 8999999999987777889999999852211 1 11222222 24567789999999877666 7899
Q ss_pred EEcccCCCCCCCCceeeEEEeccccccccceeEEEe-cCCCCCCCccc
Q psy14815 308 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW-NPVVPEPQKTN 354 (479)
Q Consensus 308 ~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-sp~~~~l~~~~ 354 (479)
.+|+.+ ++ .+..+ ..+.. +++++| +|+++.|..+.
T Consensus 240 ~~~~~~-g~---------~~~~~-~~~~~-~~~~~f~~~d~~~L~v~t 275 (296)
T 3e5z_A 240 HVLTPD-GD---------ELGRV-LTPQT-TSNLCFGGPEGRTLYMTV 275 (296)
T ss_dssp EEECTT-SC---------EEEEE-ECSSC-CCEEEEESTTSCEEEEEE
T ss_pred EEECCC-CC---------EEEEE-ECCCC-ceeEEEECCCCCEEEEEc
Confidence 999987 43 23322 34445 899999 68888775543
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.65 E-value=2.5e-14 Score=134.36 Aligned_cols=227 Identities=10% Similarity=-0.022 Sum_probs=148.1
Q ss_pred EEEECCCCCEEEEEEC----------CCeEEEEECCCCeEEEeEEEeC------CCCcEEEEEEcCCCCEEEEEeC--CC
Q psy14815 95 ETAWSPCGNFIASASF----------DATTAVWDKRSGQFECNATLEG------HENEVKSVTWSKNGQFLATCSR--DK 156 (479)
Q Consensus 95 ~v~~~~~~~~l~t~~~----------dg~i~iwd~~~~~~~~~~~~~~------~~~~v~~l~~~~~~~~l~~~~~--dg 156 (479)
.++|+|++++++++.. ++.|.+||..+++. +..+.. +......++++|||++|+++.. ++
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~--~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~ 131 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTF--EKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPAT 131 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCE--EEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcE--EEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCC
Confidence 8999999999999863 57899999998863 333332 1245678999999999999874 57
Q ss_pred cEEEEEeCCCCceeeeee-eeccccceeEEEEecCC-CEEEEEEcCCcEEEEecCCcccceEee---eeecCCCccEEEE
Q psy14815 157 SVWVWEVGEEDEYECAAV-INAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINF---ATLKSHTSTVWSL 231 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~-~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~~~~~v~~~ 231 (479)
.|.+||+.+. +.+.. +.. . ....+.+.|++ ..+++.+.||.+.+|+........... ..+.....++ .+
T Consensus 132 ~v~v~d~~~~---~~~~~~i~~-~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~ 205 (361)
T 2oiz_A 132 SIGIVDVAKG---DYVEDVTAA-A-GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FI 205 (361)
T ss_dssp EEEEEETTTT---EEEEEEGGG-T-TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CS
T ss_pred eEEEEECCCC---cEEEEEecC-C-CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EE
Confidence 8999999987 33333 221 1 12335667765 678888999999999986522111011 1122222222 23
Q ss_pred EEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc------c---cccEEEEEecCCCCeEEEEe
Q psy14815 232 AFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH------H---GRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 232 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~i~~l~~~~~~~~l~~~~ 302 (479)
.+++++..++..+.++.|.++|+..... .....+... . ......++|+|+++.++++.
T Consensus 206 ~~~~~g~~~~~~~~~~~v~v~d~~~~~~-------------~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~ 272 (361)
T 2oiz_A 206 APALDKDKAHFVSYYGNVYSADFSGDEV-------------KVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFM 272 (361)
T ss_dssp CCEECSSEEEEEBTTSEEEEEECSSSSC-------------EEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEE
T ss_pred EecccCCEEEEEeCCCeEEEEEecCCCc-------------eecccccccCccccccccccCCeeEEEEecCCCeEEEEE
Confidence 3467777777788899999999853321 111211110 0 01112378999988777664
Q ss_pred C-----------CCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 303 G-----------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 303 ~-----------dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
. ++.|.+||+.+++ .+..+. .+. +.+++|+|||++|....
T Consensus 273 ~~~~~~~~~~~~~~~v~viD~~t~~---------~v~~i~-~~~--p~~ia~spdg~~l~v~n 323 (361)
T 2oiz_A 273 HPDGKEGTHKFPAAEIWVMDTKTKQ---------RVARIP-GRD--ALSMTIDQQRNLMLTLD 323 (361)
T ss_dssp ESSCCTTCTTCCCSEEEEEETTTTE---------EEEEEE-CTT--CCEEEEETTTTEEEEEC
T ss_pred ccCCCcccccCCCceEEEEECCCCc---------EEEEEe-cCC--eeEEEECCCCCEEEEeC
Confidence 3 3589999999987 444443 444 99999999999887554
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.65 E-value=8.3e-15 Score=149.68 Aligned_cols=233 Identities=10% Similarity=-0.012 Sum_probs=157.7
Q ss_pred cccCCcEEEEEECCCCCEEEEE--ECCCeEEEEECCCCeEEEeEEEeCCCCcEE---------EEEEc--CCCCE-EEEE
Q psy14815 87 DGHQRTIRETAWSPCGNFIASA--SFDATTAVWDKRSGQFECNATLEGHENEVK---------SVTWS--KNGQF-LATC 152 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~---------~l~~~--~~~~~-l~~~ 152 (479)
.+|...+..++|++++-++++. +.++...||....+. ....+..+...+. ...|+ |||+. |+.+
T Consensus 20 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 20 ASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADG--AEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp HHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTS--CEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred hhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCC--CcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 4678899999999887666666 557899999854332 2345555655555 56666 99998 7665
Q ss_pred eC-CCcEEEEEeC--C-CCceeeeeeeec-----cccceeEEEEecCCCEEEEEEcC----------CcEEEEecCC---
Q psy14815 153 SR-DKSVWVWEVG--E-EDEYECAAVINA-----HIQDVKKVRFHPFDNILASASYD----------DTVKLFKEDK--- 210 (479)
Q Consensus 153 ~~-dg~i~vwd~~--~-~~~~~~~~~~~~-----~~~~v~~l~~~~~~~~l~~~~~d----------g~i~i~d~~~--- 210 (479)
+. +..|.++++. + +. . ..+.. |...+.+++|+|+|+.|++++.+ ..|++||+.+
T Consensus 98 ~~~~~~l~~~~~~~~g~~~-~---~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 173 (662)
T 3azo_A 98 HFGDQRLYAFEPDAPGGAV-P---RPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA 173 (662)
T ss_dssp BTTTCCEEEECTTSTTCCC-C---EECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT
T ss_pred ECCCCeEEEEcCCCCCCCC-C---EeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcc
Confidence 54 4556666655 2 32 1 22333 56678899999999999998877 5899999987
Q ss_pred ---cccceEeeeeec-CCCccEEEEEEccCCCEEEEeeCC--------CeEEEEeccCCCCCCCCCCCCCCCceEEEEEE
Q psy14815 211 ---AEADWINFATLK-SHTSTVWSLAFDRIGSRLATCSDD--------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 278 (479)
Q Consensus 211 ---~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (479)
+.. ..+. .+...+..++|+|||++|+.++.+ ..|++||+..... ......+
T Consensus 174 ~~~~~~-----~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~------------~~~~~~l 236 (662)
T 3azo_A 174 ADRSAV-----RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR------------FADTRTL 236 (662)
T ss_dssp TCGGGS-----EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC------------EEEEEEE
T ss_pred ccCCce-----eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc------------ccccEEe
Confidence 432 3344 556678889999999999887754 3799999852110 0112333
Q ss_pred eccccccEEEEEecCCCCeEEEEeCCC--eEEEcccCCCCCCCCceeeEEEeccccccccc--------eeEEEecCCCC
Q psy14815 279 SGHHGRTIYDISWCHLTDLIATACGDD--AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQD--------VNCVAWNPVVP 348 (479)
Q Consensus 279 ~~~~~~~i~~l~~~~~~~~l~~~~~dg--~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~--------v~~~~~sp~~~ 348 (479)
...+...+..++|+|||+++++++.++ .|.+|+..+++ ...+...+... +..++|+|+++
T Consensus 237 ~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~----------~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~ 306 (662)
T 3azo_A 237 LGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGA----------ATQLCRREEEFAGPLWTPGMRWFAPLANGL 306 (662)
T ss_dssp EEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCC----------EEESSCCSSBSSCCCCSTTCCSEEECTTSC
T ss_pred CCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCc----------eeecccccccccCccccccCceEeEeCCCE
Confidence 333356899999999999888888888 56666665554 33333333222 56788888887
Q ss_pred CCCc
Q psy14815 349 EPQK 352 (479)
Q Consensus 349 ~l~~ 352 (479)
+++.
T Consensus 307 ~~~~ 310 (662)
T 3azo_A 307 IAVV 310 (662)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6643
|
| >3rxy_A NIF3 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, NIF3 superfamily, unknown function; 2.00A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.65 E-value=3.7e-16 Score=131.03 Aligned_cols=70 Identities=23% Similarity=0.259 Sum_probs=65.3
Q ss_pred ccccHHHHHHHHHHhCCCccCCCCCcceeeeccCCCcCcccEEEEEecCCHHHHHHHHHcCCCEEEEeCCCCcccc
Q psy14815 353 TNLTLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIAYHPPIFAPL 428 (479)
Q Consensus 353 ~~~~~~~~~~~l~~~~p~~~a~~wd~~Gl~v~~~~~~~~v~~il~~~d~t~~~~~~a~~~~~~~i~~~h~~~~~~~ 428 (479)
+++++.++.+.+++.+| ++++||++|+++ .+ ++|+++++++|+|++++++|++.|||+||||||++|.+.
T Consensus 5 ~~m~~~~I~~~~~e~ap--lae~~dd~Gllv--~~--~eV~kIlvaLD~t~~vv~eA~~~g~dlIItHHP~~~~~~ 74 (278)
T 3rxy_A 5 AGLSTAELVDIALEMAE--MRTLPADSAVYV--ES--TDLKRVMMGIDIGPAELLLARQLGCDGVIAHHPAGGSAT 74 (278)
T ss_dssp CCBCHHHHHHHHHHHTT--CSSCCTTCEEEE--CC--SCBSEEEEESSCCHHHHHHHHHTTCSEEEESSCCSHHHH
T ss_pred ccCcHHHHHHHHHHhcC--cccCCCCceeee--cc--ccccEEEEEECCCHHHHHHHHHcCCCEEEECCCcchhhh
Confidence 45789999999999999 999999999999 43 799999999999999999999999999999999999943
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.64 E-value=4e-15 Score=141.80 Aligned_cols=254 Identities=11% Similarity=0.053 Sum_probs=155.8
Q ss_pred EEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEE
Q psy14815 15 WNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 94 (479)
Q Consensus 15 ~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~ 94 (479)
..+.|+|||++|+.++.++.|.+||+.+++.......... ...++...++.... ..... ...
T Consensus 84 ~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~------~~~~g~~l~~~~~~-----~~~~~-------~~~ 145 (396)
T 3c5m_A 84 FGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEE------WKGYGTWVANSDCT-----KLVGI-------EIL 145 (396)
T ss_dssp TTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTT------EEEEEEEEECTTSS-----EEEEE-------EEE
T ss_pred ccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccc------cCCCCCEEEeccCC-----ccccc-------ccc
Confidence 3478999999999999888999999987765433321111 11111111111000 00000 001
Q ss_pred EEEECCCCCEEEEE-----ECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCC------CcEEEEE
Q psy14815 95 ETAWSPCGNFIASA-----SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRD------KSVWVWE 162 (479)
Q Consensus 95 ~v~~~~~~~~l~t~-----~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~d------g~i~vwd 162 (479)
.+.|+|+++.++.+ ..+..|.+||+.+++...+. .+...+..+.|+| +++.|+..+.+ ..|.+||
T Consensus 146 ~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~---~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d 222 (396)
T 3c5m_A 146 KRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH---QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVN 222 (396)
T ss_dssp GGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE---EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEE
T ss_pred ccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec---cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEE
Confidence 24578888877665 35678999999988643332 3566789999999 78877766553 3588888
Q ss_pred eCCCCceeeeeeeecc--ccceeEEEEecCCCEEEEEEcC-----CcEEEEecCCcccceEeeeeecCCCccEEEEEEcc
Q psy14815 163 VGEEDEYECAAVINAH--IQDVKKVRFHPFDNILASASYD-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR 235 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~--~~~v~~l~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 235 (479)
+..... . .+..+ ...+..++|+|+|+.|+.++.+ +.|++||+.++.. ..+..... .. +.|+|
T Consensus 223 ~~~~~~-~---~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~--~~l~~~~~----~~-~~~s~ 291 (396)
T 3c5m_A 223 EDGSNV-R---KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN--EEVMVMPP----CS-HLMSN 291 (396)
T ss_dssp TTSCCC-E---ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE--EEEEECCS----EE-EEEEC
T ss_pred CCCCce-e---EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe--EEeeeCCC----CC-CCccC
Confidence 866432 1 12222 2357889999999988777654 4499999987653 22222222 23 88999
Q ss_pred -CCCEEEEee----------------CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccc----------cEEE
Q psy14815 236 -IGSRLATCS----------------DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR----------TIYD 288 (479)
Q Consensus 236 -~~~~l~s~~----------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~i~~ 288 (479)
+|+++++++ .++.|++||+..... ..+..+... .+..
T Consensus 292 ~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~----------------~~l~~~~~~~~~~~~~~~~~~~~ 355 (396)
T 3c5m_A 292 FDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA----------------QKLCKHSTSWDVLDGDRQITHPH 355 (396)
T ss_dssp SSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC----------------CEEEECCCCCCCBTTBSSTTCCC
T ss_pred CCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce----------------EEccCCCCccccccccccCCCCC
Confidence 999888754 347899999754321 112222111 2566
Q ss_pred EEecCCCCeEEEEeC-CCeEEEc--ccCCCC
Q psy14815 289 ISWCHLTDLIATACG-DDAIRIF--KENPEA 316 (479)
Q Consensus 289 l~~~~~~~~l~~~~~-dg~i~vw--~~~~~~ 316 (479)
++|+|+|+.|+.++. ++...+| ++..+.
T Consensus 356 ~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~ 386 (396)
T 3c5m_A 356 PSFTPNDDGVLFTSDFEGVPAIYIADVPESY 386 (396)
T ss_dssp CEECTTSSEEEEEECTTSSCEEEEEECCTTC
T ss_pred ceEccCCCeEEEEecCCCCceEEEEEEcccc
Confidence 789999998877765 4555555 444443
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.63 E-value=4.2e-14 Score=146.10 Aligned_cols=250 Identities=10% Similarity=0.023 Sum_probs=162.7
Q ss_pred ccccceEEEEECCCCCeEEEeeCC-----CcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGED-----KNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+|...+..++|||||++||.++.+ .+|++||+.+++.+...
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~---------------------------------- 205 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE---------------------------------- 205 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE----------------------------------
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc----------------------------------
Confidence 344578899999999999887643 35999998877643210
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCe--------------EEEEECCCCeEEEeEEEe--CCCCcEEEEEEcCCCC
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDAT--------------TAVWDKRSGQFECNATLE--GHENEVKSVTWSKNGQ 147 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~--------------i~iwd~~~~~~~~~~~~~--~~~~~v~~l~~~~~~~ 147 (479)
.+...+..++|+|| +.|+.++.++. |++|++.+++......+. .+...+.++.|+|||+
T Consensus 206 ----~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~ 280 (741)
T 1yr2_A 206 ----LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGR 280 (741)
T ss_dssp ----EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSC
T ss_pred ----CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCC
Confidence 01112346889999 99988887654 899999877522222333 2334588999999999
Q ss_pred EEEEEeCCC-----cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcC----CcEEEEecCCcccceEee
Q psy14815 148 FLATCSRDK-----SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD----DTVKLFKEDKAEADWINF 218 (479)
Q Consensus 148 ~l~~~~~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~ 218 (479)
+|+..+.++ .|.+||+.++.. .....+..+....... ++|+++.|+..+.+ +.|.+||+.++...+ .
T Consensus 281 ~l~~~~~~~~~~~~~l~~~d~~~~~~-~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~--~ 356 (741)
T 1yr2_A 281 WVVITSSEGTDPVNTVHVARVTNGKI-GPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRF--D 356 (741)
T ss_dssp EEEEEEECTTCSCCEEEEEEEETTEE-CCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEE--E
T ss_pred EEEEEEEccCCCcceEEEEECCCCCC-cccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCcccc--E
Confidence 988877654 799999987511 1023344444444444 34888888887753 459999987642111 2
Q ss_pred eeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeE
Q psy14815 219 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI 298 (479)
Q Consensus 219 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l 298 (479)
..+..+...+..+.++ ++..+++...|+..++|.+.... .....+.......+..++++|+++.+
T Consensus 357 ~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g--------------~~~~~l~~~~~~~v~~~~~s~d~~~l 421 (741)
T 1yr2_A 357 TVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDG--------------KPAGAVSLPGIGSASGLSGRPGDRHA 421 (741)
T ss_dssp EEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTS--------------CEEEECBCSSSCEEEEEECCBTCSCE
T ss_pred EEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCC--------------CceeeccCCCCeEEEEeecCCCCCEE
Confidence 2234455567778887 56677888889988888764211 22344443335678899999998866
Q ss_pred EEE----eCCCeEEEcccCCCC
Q psy14815 299 ATA----CGDDAIRIFKENPEA 316 (479)
Q Consensus 299 ~~~----~~dg~i~vw~~~~~~ 316 (479)
+.. ...++|++||+.+++
T Consensus 422 ~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 422 YLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEEEETTEEEEEEEEETTTTE
T ss_pred EEEEcCCCCCCEEEEEECCCCc
Confidence 533 234789999987754
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.4e-12 Score=128.90 Aligned_cols=291 Identities=11% Similarity=0.089 Sum_probs=186.9
Q ss_pred ceEEEEECCCCCeEEEeeCCCcEEEEecc--cccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 13 RVWNVSWNPQGTMISSCGEDKNIRLWVMV--IREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~~dg~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
.+..+.|+|||+++++++.|+.|.+||+. +++.+..+ ...
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i--------------------------------------~~G 239 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEI--------------------------------------KIG 239 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEE--------------------------------------ECC
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEE--------------------------------------ecC
Confidence 56789999999999999999999999984 44433222 112
Q ss_pred CcEEEEEEC----CCCCEEEEEEC-CCeEEEEECCCCeEEEeEEEeC--------C-CCcEEEEEEcCCCCEE-EEEeCC
Q psy14815 91 RTIRETAWS----PCGNFIASASF-DATTAVWDKRSGQFECNATLEG--------H-ENEVKSVTWSKNGQFL-ATCSRD 155 (479)
Q Consensus 91 ~~v~~v~~~----~~~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~~--------~-~~~v~~l~~~~~~~~l-~~~~~d 155 (479)
.....++|+ |||++++++.. +++|.++|..+.+........+ | ...+..+..++++..+ +....+
T Consensus 240 ~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~ 319 (567)
T 1qks_A 240 SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKET 319 (567)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCC
Confidence 345789999 69999888766 5899999998887433222211 1 2267888888876654 444557
Q ss_pred CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeee-eecCCCccEEEEEE
Q psy14815 156 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFA-TLKSHTSTVWSLAF 233 (479)
Q Consensus 156 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~-~~~~~~~~v~~~~~ 233 (479)
|.|.++|....+... +..+ ........+.|+|++++++++. .++.|.++|..+++.....-. ....|.+.-..+ +
T Consensus 320 g~v~~vd~~~~~~~~-v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~ 396 (567)
T 1qks_A 320 GKILLVDYTDLNNLK-TTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-V 396 (567)
T ss_dssp TEEEEEETTCSSEEE-EEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-E
T ss_pred CeEEEEecCCCccce-eeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-E
Confidence 999999987754322 2222 2234467889999999887766 578899999997764211111 112344322222 5
Q ss_pred ccCCCEEE-Eee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeC-------C
Q psy14815 234 DRIGSRLA-TCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-------D 304 (479)
Q Consensus 234 ~~~~~~l~-s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~-------d 304 (479)
+|++..++ ++. .++.|.++|....... ...|+.+.++... +..-..+..+|+++++.+... .
T Consensus 397 ~p~~g~v~~t~~~g~~~Vsvid~~~~~~~--------~~~~kvv~~i~~~-g~g~~~i~~~p~~~~l~v~~~~~~~~~~~ 467 (567)
T 1qks_A 397 HPTFGPVWATSHMGDDSVALIGTDPEGHP--------DNAWKILDSFPAL-GGGSLFIKTHPNSQYLYVDATLNPEAEIS 467 (567)
T ss_dssp ETTTEEEEEEEBSSSSEEEEEECCTTTCT--------TTBTSEEEEEECS-CSCCCCEECCTTCSEEEEECTTCSSHHHH
T ss_pred CCCCCcEEEeCCCCCCeEEEecCCCCCCc--------cccCEEEEEEecC-CCCCEEEEeCCCCCeEEEecCCCCCcccC
Confidence 78755554 443 4689999998653221 2346777887764 334455789999998888663 4
Q ss_pred CeEEEcccCCCCCCCCceeeEEEec----cccccccceeEEEecCCCCCCCcc
Q psy14815 305 DAIRIFKENPEAGDSDMVSFDLVHT----EHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 305 g~i~vw~~~~~~~~~~~~~~~~~~~----~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
++|.++|+.+.+.......++.+.. -+..-...+..+.|+|+|+.+-.+
T Consensus 468 ~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s 520 (567)
T 1qks_A 468 GSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFS 520 (567)
T ss_dssp TCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEE
T ss_pred ceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEE
Confidence 6999999987621000011222211 011123578899999999987544
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.2e-14 Score=147.11 Aligned_cols=234 Identities=12% Similarity=0.049 Sum_probs=154.0
Q ss_pred ccCCcEEEEEECCCCCEEEEE-----ECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc-----
Q psy14815 88 GHQRTIRETAWSPCGNFIASA-----SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS----- 157 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~-----~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~----- 157 (479)
+|...+..++|||||++|+.+ +.+..|++||+.+++......+... ....++|+|||+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGG--KYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCC--TTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcc--cccceEEecCCCEEEEEEecCCCCCcc
Confidence 456678999999999999843 4456899999999863201111111 1268999999999999988776
Q ss_pred --------EEEEEeCCCCce-eeeeeeeccccceeEEEEecCCCEEEEEEcCC----cEEEEecCCcccceEeeeeecCC
Q psy14815 158 --------VWVWEVGEEDEY-ECAAVINAHIQDVKKVRFHPFDNILASASYDD----TVKLFKEDKAEADWINFATLKSH 224 (479)
Q Consensus 158 --------i~vwd~~~~~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~~ 224 (479)
|++|++.++... ..+.....+...+.++.|+|+|++|+.++.++ .|.+++..++. ...+..+
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-----~~~l~~~ 270 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-----FRLLVKG 270 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-----CEEEEEC
T ss_pred ccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-----eEEeecC
Confidence 999999876421 23333334556788999999999998887666 56777654333 2333344
Q ss_pred CccEEEEEEccCCCEEEEee---CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEE
Q psy14815 225 TSTVWSLAFDRIGSRLATCS---DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA 301 (479)
Q Consensus 225 ~~~v~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~ 301 (479)
...+....+ +++++++... .++.|.+||+..+.. ..+..+ +..+....+..++|+ ++.++++.
T Consensus 271 ~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~----------~~~~~l--~~~~~~~~l~~~~~~-~~~lv~~~ 336 (695)
T 2bkl_A 271 VGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPAR----------ASWKEI--VPEDSSASLLSVSIV-GGHLSLEY 336 (695)
T ss_dssp SSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSG----------GGCEEE--ECCCSSCEEEEEEEE-TTEEEEEE
T ss_pred CCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCc----------cCCeEE--ecCCCCCeEEEEEEE-CCEEEEEE
Confidence 455556666 5666444433 257899999854421 111211 222224568888888 67788999
Q ss_pred eCCCeEEEcccCC-CCCCCCceeeEEEeccccccccceeEEEecCCCCCCC
Q psy14815 302 CGDDAIRIFKENP-EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 302 ~~dg~i~vw~~~~-~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 351 (479)
..|+..++|.++. ++ ....+.....+.+..++++|+++.+.
T Consensus 337 ~~dg~~~l~~~~~~g~---------~~~~l~~~~~~~v~~~~~s~d~~~l~ 378 (695)
T 2bkl_A 337 LKDATSEVRVATLKGK---------PVRTVQLPGVGAASNLMGLEDLDDAY 378 (695)
T ss_dssp EETTEEEEEEEETTCC---------EEEECCCSSSSEECCCBSCTTCSEEE
T ss_pred EECCEEEEEEEeCCCC---------eeEEecCCCCeEEEEeecCCCCCEEE
Confidence 9999988887653 22 23333222356788889999987764
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.59 E-value=7.3e-13 Score=119.15 Aligned_cols=217 Identities=11% Similarity=0.063 Sum_probs=154.3
Q ss_pred CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC-CcEEEEEECC
Q psy14815 22 QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ-RTIRETAWSP 100 (479)
Q Consensus 22 ~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~-~~v~~v~~~~ 100 (479)
.+++|++++.|+.|.+||.++++.+.++. .+. ..+.++.++|
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~-------------------------------------~~~~~~~~~~~~~p 46 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYP-------------------------------------LEKGWECNSVAATK 46 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEE-------------------------------------CCTTCCCCEEEECT
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeC-------------------------------------CCccCCCcCeEECC
Confidence 46789999999999999988888765442 122 3577889999
Q ss_pred CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCC-CCcEEEEEEcCCCCEEEEEeC-CCcEEEEEeCCCCceeeeee---e
Q psy14815 101 CGNFIASASFDATTAVWDKRSGQFECNATLEGH-ENEVKSVTWSKNGQFLATCSR-DKSVWVWEVGEEDEYECAAV---I 175 (479)
Q Consensus 101 ~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~---~ 175 (479)
+|++++ +.++.|..||. +++ .+..+..+ ...+.++.+.++|+.+++.+. ++.+..+|.. ++....... .
T Consensus 47 dG~ilv--s~~~~V~~~d~-~G~--~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk~l~~~~~~~~~ 120 (276)
T 3no2_A 47 AGEILF--SYSKGAKMITR-DGR--ELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMK-GEVLSKTEFETGI 120 (276)
T ss_dssp TSCEEE--ECBSEEEEECT-TSC--EEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTT-SCEEEEEEECCSC
T ss_pred CCCEEE--eCCCCEEEECC-CCC--EEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCC-CCEEEEEeccCCC
Confidence 999888 45788999999 676 45566654 357889999999999999887 7777777753 322111111 0
Q ss_pred eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEecc
Q psy14815 176 NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY 255 (479)
Q Consensus 176 ~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 255 (479)
..+......+++.++|+++++...++.|..||.. ++..| ++... ..+.++...++++.+++++.++.|..+|..
T Consensus 121 ~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w----~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 121 ERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLN----SVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp SSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEE----EEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred CcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEE----EEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 1222345567789999999999999999999988 66533 33322 344567788999999999888899999974
Q ss_pred CCCCCCCCCCCCCCCceEEEEEEecc-----ccccEEEEEecCCCCeEEEEe
Q psy14815 256 KPGNSAGIPTPDNDSVWKCVCTLSGH-----HGRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~l~~~~~~~~l~~~~ 302 (479)
++ +.+-++... .-..+..+...++|.++++..
T Consensus 195 tG---------------~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 195 SN---------------RIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp TC---------------CEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred CC---------------cEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 33 334444322 122377888889998887764
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.7e-11 Score=111.67 Aligned_cols=269 Identities=7% Similarity=-0.007 Sum_probs=181.3
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
.....+.+++++++|++.++...++.|.+||.. ++.. .+ ....
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~-~~-----------------------------------~~~~ 59 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK-EF-----------------------------------EVPT 59 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EE-----------------------------------ECSS
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceE-EE-----------------------------------ECCC
Confidence 345678999999999988877778899999865 3211 11 0112
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 168 (479)
....+.++++.+++.+.++...++.|..+|.. ++.. ..........+.++++.++++++++...++.|..+|.. ++.
T Consensus 60 ~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~ 136 (300)
T 2qc5_A 60 PDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI 136 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE
Confidence 34578899999999877777667899999988 6532 22333344678999999999877777668889999887 321
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCe
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 248 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~ 248 (479)
. ...+......+.++++.+++++.++...++.|..||. .+.. . ......+...+..++++++++..++....+.
T Consensus 137 -~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~--~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~ 210 (300)
T 2qc5_A 137 -Y-EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKL--E-EYPLPTNAAAPVGITSGNDGALWFVEIMGNK 210 (300)
T ss_dssp -E-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE--E-EEECSSTTCCEEEEEECTTSSEEEEETTTTE
T ss_pred -E-EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcE--E-EeeCCCCCCCcceEEECCCCCEEEEccCCCE
Confidence 1 1112223456889999999997666666788999998 3332 1 1223334567889999999987776666778
Q ss_pred EEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEe
Q psy14815 249 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVH 328 (479)
Q Consensus 249 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~ 328 (479)
|.+||. .... . ....... ...+.++++++++.++++...++.|..|+.. +. ...
T Consensus 211 i~~~~~-~g~~-------------~-~~~~~~~-~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~---------~~~ 264 (300)
T 2qc5_A 211 IGRITT-TGEI-------------S-EYDIPTP-NARPHAITAGKNSEIWFTEWGANQIGRITND-NT---------IQE 264 (300)
T ss_dssp EEEECT-TCCE-------------E-EEECSST-TCCEEEEEECSTTCEEEEETTTTEEEEECTT-SC---------EEE
T ss_pred EEEEcC-CCcE-------------E-EEECCCC-CCCceEEEECCCCCEEEeccCCCeEEEECCC-Cc---------EEE
Confidence 999986 1110 1 1112222 4568899999999877777677899999983 33 111
Q ss_pred ccccccccceeEEEecCCCCC
Q psy14815 329 TEHRAHNQDVNCVAWNPVVPE 349 (479)
Q Consensus 329 ~~~~~h~~~v~~~~~sp~~~~ 349 (479)
.........+.+++++++|..
T Consensus 265 ~~~~~~~~~~~~i~~~~~g~l 285 (300)
T 2qc5_A 265 YQLQTENAEPHGITFGKDGSV 285 (300)
T ss_dssp EECCSTTCCCCCEEECTTSCE
T ss_pred EECCccCCccceeEeCCCCCE
Confidence 111223345778888888764
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=3.7e-12 Score=125.87 Aligned_cols=268 Identities=12% Similarity=0.084 Sum_probs=172.3
Q ss_pred CCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECC
Q psy14815 21 PQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 100 (479)
Q Consensus 21 ~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~ 100 (479)
|.+.++++...+++|.++|..+++.+..+ .....+..+.|+|
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i--------------------------------------~~g~~p~~v~~Sp 206 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVL--------------------------------------DTGYAVHISRLSA 206 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEE--------------------------------------ECSSCEEEEEECT
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEE--------------------------------------eCCCCccceEECC
Confidence 33445666677888888888777665443 1233566899999
Q ss_pred CCCEEEEEECCCeEEEEECC--CCeEEEeEEEeCCCCcEEEEEEc----CCCCEEEEEeC-CCcEEEEEeCCCCceeeee
Q psy14815 101 CGNFIASASFDATTAVWDKR--SGQFECNATLEGHENEVKSVTWS----KNGQFLATCSR-DKSVWVWEVGEEDEYECAA 173 (479)
Q Consensus 101 ~~~~l~t~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~v~~l~~~----~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~ 173 (479)
|++++++++.|+.|.+||+. +++ .+..+... .....++|+ |||+++++++. ++++.++|..+.+....+.
T Consensus 207 DGr~lyv~~~dg~V~viD~~~~t~~--~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~ 283 (567)
T 1qks_A 207 SGRYLFVIGRDGKVNMIDLWMKEPT--TVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQS 283 (567)
T ss_dssp TSCEEEEEETTSEEEEEETTSSSCC--EEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCCCc--EeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEe
Confidence 99999999999999999996 665 44555543 356799999 69998888766 5899999988875443332
Q ss_pred eee-------cccc-ceeEEEEecCCCE-EEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee
Q psy14815 174 VIN-------AHIQ-DVKKVRFHPFDNI-LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244 (479)
Q Consensus 174 ~~~-------~~~~-~v~~l~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 244 (479)
... .|.. .+..+..++++.. ++....+|.|.++|...... ..+..+ ........+.|+|++++++++.
T Consensus 284 ~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~--~~v~~i-~~~~~~~d~~~~pdgr~~~va~ 360 (567)
T 1qks_A 284 TRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNN--LKTTEI-SAERFLHDGGLDGSHRYFITAA 360 (567)
T ss_dssp CCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSE--EEEEEE-ECCSSEEEEEECTTSCEEEEEE
T ss_pred ccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCcc--ceeeee-eccccccCceECCCCCEEEEEe
Confidence 211 1222 5778888887654 44455679999999876442 112222 2334567889999999987655
Q ss_pred -CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEec-----cccccEEEEEecCCCC-eEEEEe-CCCeEEEcccCCCC
Q psy14815 245 -DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-----HHGRTIYDISWCHLTD-LIATAC-GDDAIRIFKENPEA 316 (479)
Q Consensus 245 -~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~l~~~~~~~-~l~~~~-~dg~i~vw~~~~~~ 316 (479)
.++.|.++|+... +.+..+.. |.+..+. + ++|++. +++++. .++.|.+++..+.+
T Consensus 361 ~~sn~V~ViD~~t~---------------kl~~~i~vgg~~Phpg~g~~-~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~ 423 (567)
T 1qks_A 361 NARNKLVVIDTKEG---------------KLVAIEDTGGQTPHPGRGAN-F-VHPTFGPVWATSHMGDDSVALIGTDPEG 423 (567)
T ss_dssp GGGTEEEEEETTTT---------------EEEEEEECSSSSBCCTTCEE-E-EETTTEEEEEEEBSSSSEEEEEECCTTT
T ss_pred CCCCeEEEEECCCC---------------cEEEEEeccCcCCCCcccee-e-ECCCCCcEEEeCCCCCCeEEEecCCCCC
Confidence 5788999998543 33333332 1112222 2 578744 445543 46899999998743
Q ss_pred CCCCceeeEEEeccccccccceeEEEecCCCCCCCc
Q psy14815 317 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 317 ~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~ 352 (479)
... ..+..+..+. .....-..+..+|++++|..
T Consensus 424 ~~~--~~~kvv~~i~-~~g~g~~~i~~~p~~~~l~v 456 (567)
T 1qks_A 424 HPD--NAWKILDSFP-ALGGGSLFIKTHPNSQYLYV 456 (567)
T ss_dssp CTT--TBTSEEEEEE-CSCSCCCCEECCTTCSEEEE
T ss_pred Ccc--ccCEEEEEEe-cCCCCCEEEEeCCCCCeEEE
Confidence 211 1122333332 22223344778999987743
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.57 E-value=3e-12 Score=118.56 Aligned_cols=236 Identities=4% Similarity=-0.017 Sum_probs=155.9
Q ss_pred ceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCc
Q psy14815 13 RVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRT 92 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 92 (479)
....+.+. +++++++...++.|.+||..+++.+..+ .....
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i--------------------------------------~~~~~ 85 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRI--------------------------------------TGFTS 85 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEE--------------------------------------ECCSS
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEc--------------------------------------CCCCC
Confidence 45667764 3445555556788888888777655443 12356
Q ss_pred EEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCC-----CcEEEEEEcCCCCEEEEEe--CCCcEEEEEeCC
Q psy14815 93 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHE-----NEVKSVTWSKNGQFLATCS--RDKSVWVWEVGE 165 (479)
Q Consensus 93 v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~-----~~v~~l~~~~~~~~l~~~~--~dg~i~vwd~~~ 165 (479)
...+++++++...++...++.|.+||..+++.. ..+.... .....+++ ++..++++. .++.|.++|..+
T Consensus 86 p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~--~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t 161 (328)
T 3dsm_A 86 PRYIHFLSDEKAYVTQIWDYRIFIINPKTYEIT--GYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTET 161 (328)
T ss_dssp EEEEEEEETTEEEEEEBSCSEEEEEETTTTEEE--EEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTT
T ss_pred CcEEEEeCCCeEEEEECCCCeEEEEECCCCeEE--EEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCC
Confidence 788999888854444447899999999998733 3333222 14556777 345566555 488999999998
Q ss_pred CCceeeeeeeeccccceeEEEEecCCCEEEEEEcC----------CcEEEEecCCcccceEeeeeecC-CCccEEEEEEc
Q psy14815 166 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYD----------DTVKLFKEDKAEADWINFATLKS-HTSTVWSLAFD 234 (479)
Q Consensus 166 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~~~~-~~~~v~~~~~~ 234 (479)
.+ ....+.. ......++++|+|++++++..+ +.|.++|..+.+. ...+.. .......++|+
T Consensus 162 ~~---~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v----~~~~~~~~g~~p~~la~~ 233 (328)
T 3dsm_A 162 DK---VVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTV----EKQFKFKLGDWPSEVQLN 233 (328)
T ss_dssp TE---EEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEE----EEEEECCTTCCCEEEEEC
T ss_pred Ce---EEEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeE----EEEEecCCCCCceeEEEe
Confidence 73 3333332 2335688999999977776654 7899999987653 222221 12367899999
Q ss_pred cCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC-CCCeEEEE----eCCCeEEE
Q psy14815 235 RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATA----CGDDAIRI 309 (479)
Q Consensus 235 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~-~~~~l~~~----~~dg~i~v 309 (479)
|+++.|+++.. .|.+||.......... .+.. .......++++| ++.++++. ..++.|.+
T Consensus 234 ~d~~~lyv~~~--~v~~~d~~t~~~~~~~-------------~~~~-~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v 297 (328)
T 3dsm_A 234 GTRDTLYWINN--DIWRMPVEADRVPVRP-------------FLEF-RDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYR 297 (328)
T ss_dssp TTSCEEEEESS--SEEEEETTCSSCCSSC-------------SBCC-CSSCEEEEEECTTTCCEEEEECTTSSSEEEEEE
T ss_pred cCCCEEEEEcc--EEEEEECCCCceeeee-------------eecC-CCCceEEEEEcCCCCeEEEEcccccccCCEEEE
Confidence 99999988765 8999998654321100 0011 134678899999 45555555 56899999
Q ss_pred cccCCCC
Q psy14815 310 FKENPEA 316 (479)
Q Consensus 310 w~~~~~~ 316 (479)
||.+ ++
T Consensus 298 ~d~~-g~ 303 (328)
T 3dsm_A 298 YSPQ-GK 303 (328)
T ss_dssp ECTT-CC
T ss_pred ECCC-CC
Confidence 9998 65
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.55 E-value=4.2e-12 Score=116.76 Aligned_cols=252 Identities=10% Similarity=0.049 Sum_probs=162.3
Q ss_pred cccccceEEEEECCCCCeEEE-------eeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 8 KGHQGRVWNVSWNPQGTMISS-------CGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 8 ~~h~~~V~~l~~s~~~~~l~t-------~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
...-....+++|+++++++++ +..++.|.+||..+++..... .
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~----------------------~-------- 63 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVIC----------------------K-------- 63 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEE----------------------C--------
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEE----------------------e--------
Confidence 344456789999999988888 667888999987655432100 0
Q ss_pred eeEEeccccCCcEEEEEECCC-CCEEEEEECCCeEEEEECCCCeEEEe-EEEe-C-CCCcEEEEEEcCCCCEEEEEeCC-
Q psy14815 81 AKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECN-ATLE-G-HENEVKSVTWSKNGQFLATCSRD- 155 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~-~~~~-~-~~~~v~~l~~~~~~~~l~~~~~d- 155 (479)
. ...++...+.+++++++ +++++ ++..+.|.+||.. ++.... .... . ....+.+++++++|+++++...+
T Consensus 64 -~--~~~~~~~~~~~i~~~~~~g~l~v-~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~ 138 (314)
T 1pjx_A 64 -P--EVNGYGGIPAGCQCDRDANQLFV-ADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGE 138 (314)
T ss_dssp -C--EETTEECCEEEEEECSSSSEEEE-EETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCB
T ss_pred -c--ccCCCCCCCceEEEecCCCcEEE-EECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcc
Confidence 0 00124467889999999 65444 4445589999998 753322 1111 1 12357899999999877776554
Q ss_pred --------------CcEEEEEeCCCCceeeeeeeeccccceeEEEEe----cCCCEEEEE-EcCCcEEEEecC-Ccccc-
Q psy14815 156 --------------KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH----PFDNILASA-SYDDTVKLFKED-KAEAD- 214 (479)
Q Consensus 156 --------------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~----~~~~~l~~~-~~dg~i~i~d~~-~~~~~- 214 (479)
+.|..||.. + ... .+..+......++++ |+++.++.+ ..++.|.+||.. .+...
T Consensus 139 ~~~~~~~~~~~~~~~~l~~~~~~-g-~~~---~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~ 213 (314)
T 1pjx_A 139 VAPADYTRSMQEKFGSIYCFTTD-G-QMI---QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIEN 213 (314)
T ss_dssp CTTSCCCBTTSSSCEEEEEECTT-S-CEE---EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEE
T ss_pred cccccccccccCCCCeEEEECCC-C-CEE---EeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcccc
Confidence 456666554 2 111 122233456789999 999766555 467899999976 22211
Q ss_pred eEeeeeecCCC-ccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC
Q psy14815 215 WINFATLKSHT-STVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 293 (479)
Q Consensus 215 ~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~ 293 (479)
......+..+. ..+..++++++|+.+++...++.|.+||...... +..+..+ ...+.+++|+|
T Consensus 214 ~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~---------------~~~~~~~-~~~~~~i~~~~ 277 (314)
T 1pjx_A 214 KKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQP---------------KMRIRCP-FEKPSNLHFKP 277 (314)
T ss_dssp EEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSC---------------SEEEECS-SSCEEEEEECT
T ss_pred ceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcE---------------eEEEeCC-CCCceeEEECC
Confidence 11223344443 5678899999998888877888999999743221 2233333 46789999999
Q ss_pred CCCeE-EEEeCCCeEEEcccCCC
Q psy14815 294 LTDLI-ATACGDDAIRIFKENPE 315 (479)
Q Consensus 294 ~~~~l-~~~~~dg~i~vw~~~~~ 315 (479)
+++.| ++...++.|..|++...
T Consensus 278 dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 278 QTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp TSSEEEEEETTTTEEEEEECSSC
T ss_pred CCCEEEEEeCCCCeEEEEeCCCC
Confidence 99944 55556689999988754
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.55 E-value=8.9e-13 Score=136.16 Aligned_cols=232 Identities=13% Similarity=0.091 Sum_probs=151.4
Q ss_pred cCCcEEEEEECCCCCEEEEEECC-----CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc------
Q psy14815 89 HQRTIRETAWSPCGNFIASASFD-----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS------ 157 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~------ 157 (479)
+...+..++|||||++|+.+..+ ..|++||+.+++.... ... ...+..++|+|| +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~--~~~~~~~~wspD-~~l~~~~~~~~~~~~~~ 236 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELK--WVKFSGLAWLGN-DALLYSRFAEPKEGQAF 236 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEE--EEESCCCEESTT-SEEEEEECCCC------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCC--CceeccEEEECC-CEEEEEEecCccccccc
Confidence 34578899999999999887654 3699999999974322 111 112357899999 98888877654
Q ss_pred --------EEEEEeCCCCce-eeeeeeeccccceeEEEEecCCCEEEEEEcCC-----cEEEEecCCcccceEeeeeecC
Q psy14815 158 --------VWVWEVGEEDEY-ECAAVINAHIQDVKKVRFHPFDNILASASYDD-----TVKLFKEDKAEADWINFATLKS 223 (479)
Q Consensus 158 --------i~vwd~~~~~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~ 223 (479)
|++|++.+.... ..+.....+...+..+.|+|+|++|+..+.++ .|.+||+.++... ....+..
T Consensus 237 ~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~--~~~~l~~ 314 (741)
T 1yr2_A 237 QALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIG--PVTALIP 314 (741)
T ss_dssp --CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEEC--CCEEEEC
T ss_pred ccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCc--ccEEecC
Confidence 888998765321 12222223333578999999999988887654 7999999865211 0223333
Q ss_pred CCccEEEEEEccCCCEEEEeeCC----CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEE
Q psy14815 224 HTSTVWSLAFDRIGSRLATCSDD----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA 299 (479)
Q Consensus 224 ~~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~ 299 (479)
+...+.... +|+|+.|+..+.+ +.|.+||+..+. ... ..+..++...+.+++|+ ++.+++
T Consensus 315 ~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-------------~~~-~~l~~~~~~~l~~~~~~-~~~lv~ 378 (741)
T 1yr2_A 315 DLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGST-------------PRF-DTVVPESKDNLESVGIA-GNRLFA 378 (741)
T ss_dssp SSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSS-------------CEE-EEEECCCSSEEEEEEEE-BTEEEE
T ss_pred CCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCc-------------ccc-EEEecCCCCeEEEEEEE-CCEEEE
Confidence 444444443 4889988877653 459999974421 011 22223335567788887 667888
Q ss_pred EEeCCCeEEEcccCC-CCCCCCceeeEEEeccccccccceeEEEecCCCCCCC
Q psy14815 300 TACGDDAIRIFKENP-EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 300 ~~~~dg~i~vw~~~~-~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 351 (479)
+...|+..+||.++. ++ ....+...+.+.+..++++|+++.|.
T Consensus 379 ~~~~dg~~~l~~~~~~g~---------~~~~l~~~~~~~v~~~~~s~d~~~l~ 422 (741)
T 1yr2_A 379 SYIHDAKSQVLAFDLDGK---------PAGAVSLPGIGSASGLSGRPGDRHAY 422 (741)
T ss_dssp EEEETTEEEEEEEETTSC---------EEEECBCSSSCEEEEEECCBTCSCEE
T ss_pred EEEECCEEEEEEEeCCCC---------ceeeccCCCCeEEEEeecCCCCCEEE
Confidence 888899888886652 22 23333223456788999999998774
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.54 E-value=1.4e-12 Score=117.23 Aligned_cols=223 Identities=9% Similarity=-0.016 Sum_probs=149.5
Q ss_pred cEEEEEECCCCCEEE-EEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCcee
Q psy14815 92 TIRETAWSPCGNFIA-SASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 170 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 170 (479)
...++++++++++++ +...++.|.+||..++... .........+.+++++++++++++.. ++.|.+||......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-- 99 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTT--VLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-- 99 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----E--ECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC--
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccc--eEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE--
Confidence 788999999998777 4467889999998665421 11122335678999999998555554 88999999876522
Q ss_pred eeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEE
Q psy14815 171 CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 250 (479)
Q Consensus 171 ~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 250 (479)
..........+..++++++++++++...++.|.+|+..+... ..........+.+++++++++.+++...++.|.
T Consensus 100 -~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~----~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~ 174 (270)
T 1rwi_B 100 -TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ----TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVV 174 (270)
T ss_dssp -EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC----EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEE
T ss_pred -eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee----EeeccccCCCceeEEEeCCCCEEEEECCCCEEE
Confidence 111112224678999999999877777788999997654332 111222334577899999998777777788999
Q ss_pred EEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEecc
Q psy14815 251 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTE 330 (479)
Q Consensus 251 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~ 330 (479)
+||...... ....... ...+..++++++|.++++...++.|.+|+..... ....
T Consensus 175 ~~~~~~~~~---------------~~~~~~~-~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~----------~~~~ 228 (270)
T 1rwi_B 175 KLEAESNNQ---------------VVLPFTD-ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT----------STVL 228 (270)
T ss_dssp EECTTTCCE---------------EECCCSS-CCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC----------CEEC
T ss_pred EEecCCCce---------------EeecccC-CCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc----------ceee
Confidence 999743211 1111111 2568899999999877777778999999987654 1112
Q ss_pred ccccccceeEEEecCCCCCC
Q psy14815 331 HRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 331 ~~~h~~~v~~~~~sp~~~~l 350 (479)
...+...+.+++++|+|...
T Consensus 229 ~~~~~~~p~~i~~~~~g~l~ 248 (270)
T 1rwi_B 229 PFTGLNTPLAVAVDSDRTVY 248 (270)
T ss_dssp CCCSCSCEEEEEECTTCCEE
T ss_pred ccCCCCCceeEEECCCCCEE
Confidence 22333568899999999743
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.53 E-value=3.2e-11 Score=109.98 Aligned_cols=237 Identities=11% Similarity=0.100 Sum_probs=155.7
Q ss_pred ccccccceEEEEECCCC-CeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 7 LKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~-~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
+..+..--.+..|+|++ .++++...++.|..||..+++.. .
T Consensus 8 ~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~------------------------------------- 49 (297)
T 3g4e_A 8 LPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-R------------------------------------- 49 (297)
T ss_dssp ECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-E-------------------------------------
T ss_pred eccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-E-------------------------------------
Confidence 33445566788999954 45566667889999987654321 0
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC--CCCcEEEEEEcCCCCEEEEEeCC--------
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG--HENEVKSVTWSKNGQFLATCSRD-------- 155 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~l~~~~~d-------- 155 (479)
......+.+++++++++++++ . ++.|.+||..+++...+..... ....+..++++|+|+++++...+
T Consensus 50 -~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~ 126 (297)
T 3g4e_A 50 -VTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLE 126 (297)
T ss_dssp -EECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCC
T ss_pred -EeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCccccccccc
Confidence 112457889999999995554 4 5789999999887544333221 12357899999999966654322
Q ss_pred -CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEE-EEEcCCcEEEEecC--Ccccc-eEeeeeecCCCccEEE
Q psy14815 156 -KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILA-SASYDDTVKLFKED--KAEAD-WINFATLKSHTSTVWS 230 (479)
Q Consensus 156 -g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~i~i~d~~--~~~~~-~~~~~~~~~~~~~v~~ 230 (479)
..-.+|.+....... .+.......+.++|+|+++.|+ +.+.++.|.+|++. ++... ...+..+..+......
T Consensus 127 ~~~~~l~~~d~~g~~~---~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g 203 (297)
T 3g4e_A 127 RHQGALYSLFPDHHVK---KYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDG 203 (297)
T ss_dssp TTCEEEEEECTTSCEE---EEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEE
T ss_pred CCCcEEEEEECCCCEE---EEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCe
Confidence 335666665432222 1223334567899999998665 45567889999974 33321 1223333344567789
Q ss_pred EEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec-CCCCeEEEEeC
Q psy14815 231 LAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC-HLTDLIATACG 303 (479)
Q Consensus 231 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~~l~~~~~ 303 (479)
++++++|+..++....+.|..||... ++.+..+..+ ...+++++|. |+++.|.+++.
T Consensus 204 ~~~d~~G~lwva~~~~~~v~~~d~~t---------------G~~~~~i~~p-~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 204 MCIDAEGKLWVACYNGGRVIRLDPVT---------------GKRLQTVKLP-VDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEBTTSCEEEEEETTTEEEEECTTT---------------CCEEEEEECS-SSBEEEEEEESGGGCEEEEEEB
T ss_pred eEECCCCCEEEEEcCCCEEEEEcCCC---------------ceEEEEEECC-CCCceEEEEeCCCCCEEEEEcC
Confidence 99999998877777788899999632 3445666654 5679999998 88776655544
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=5.5e-11 Score=108.25 Aligned_cols=199 Identities=7% Similarity=-0.058 Sum_probs=137.2
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 168 (479)
....+.++++.+++.++++...++.|..||. +++.. ..........+.++++.++++..++...++.|..||. +++.
T Consensus 97 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~ 173 (299)
T 2z2n_A 97 PDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR-EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDI 173 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE
T ss_pred cCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE-EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcE
Confidence 3457889999999988887777889999998 55432 2223334567899999999987777766789999998 4421
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCe
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 248 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~ 248 (479)
... ........+.++++++++++.++...++.|..||. ++.. . ......+...+.+++++++|+.+++...++.
T Consensus 174 -~~~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~--~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~ 247 (299)
T 2z2n_A 174 -TEF-KIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEI--T-EFKIPTPNARPHAITAGAGIDLWFTEWGANK 247 (299)
T ss_dssp -EEE-ECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE--E-EEECSSTTCCEEEEEECSTTCEEEEETTTTE
T ss_pred -EEe-eCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcE--E-EEECCCCCCCceeEEECCCCCEEEeccCCce
Confidence 111 12233456789999999987777666889999998 4442 1 1223345567899999999986666657789
Q ss_pred EEEEeccCCCCCCCCCCCCCCCceEEEEEE--eccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 249 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTL--SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 249 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
|..||.. . . +..+ ..+ ...+.++++ +++.++++.+ .+.+..++.++++
T Consensus 248 i~~~d~~-g---------------~-~~~~~~~~~-~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 248 IGRLTSN-N---------------I-IEEYPIQIK-SAEPHGICF-DGETIWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp EEEEETT-T---------------E-EEEEECSSS-SCCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred EEEECCC-C---------------c-eEEEeCCCC-CCccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence 9999962 1 1 1122 222 457899999 8888777655 5677777776543
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.52 E-value=5.4e-12 Score=116.83 Aligned_cols=223 Identities=7% Similarity=-0.044 Sum_probs=147.2
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEEeCCCCce
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDEY 169 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~ 169 (479)
.....+.+. ++...++...++.|.+||..+++ .+..+. .......+++++++ .++++. .++.|.+||..+.+
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~--~~~~i~-~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~-- 116 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFK--EVGRIT-GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYE-- 116 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCC--EEEEEE-CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTE--
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccE--EEEEcC-CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCe--
Confidence 445667774 34455555667999999999987 344454 34568899998888 455555 78999999998873
Q ss_pred eeeeeeeccc-----cceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 170 ECAAVINAHI-----QDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 170 ~~~~~~~~~~-----~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
....+.... .....+++ .+++++++.. .++.|.++|..+++. ...+.. ......++++|+|++++++
T Consensus 117 -~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~----~~~i~~-g~~p~~i~~~~dG~l~v~~ 189 (328)
T 3dsm_A 117 -ITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKV----VDELTI-GIQPTSLVMDKYNKMWTIT 189 (328)
T ss_dssp -EEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEE----EEEEEC-SSCBCCCEECTTSEEEEEB
T ss_pred -EEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeE----EEEEEc-CCCccceEEcCCCCEEEEE
Confidence 333333222 13456777 3444444433 488999999987653 233322 2334678999999877776
Q ss_pred eCC----------CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccC
Q psy14815 244 SDD----------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 313 (479)
Q Consensus 244 ~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~ 313 (479)
..+ +.|.++|.... +....+..........++|+|++++|.++.. .|.+||..
T Consensus 190 ~~~~~~~~~~~~~~~v~~id~~t~---------------~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~ 252 (328)
T 3dsm_A 190 DGGYEGSPYGYEAPSLYRIDAETF---------------TVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVE 252 (328)
T ss_dssp CCBCTTCSSCBCCCEEEEEETTTT---------------EEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETT
T ss_pred CCCccCCccccCCceEEEEECCCC---------------eEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECC
Confidence 654 78999997432 3444444322346889999999998887754 89999998
Q ss_pred CCCCCCCceeeEEEe-ccccccccceeEEEecCCCCCCCcc
Q psy14815 314 PEAGDSDMVSFDLVH-TEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 314 ~~~~~~~~~~~~~~~-~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
+++ +.. ............++++|++..|..+
T Consensus 253 t~~---------~~~~~~~~~~~~~p~gi~vdp~~g~lyva 284 (328)
T 3dsm_A 253 ADR---------VPVRPFLEFRDTKYYGLTVNPNNGEVYVA 284 (328)
T ss_dssp CSS---------CCSSCSBCCCSSCEEEEEECTTTCCEEEE
T ss_pred CCc---------eeeeeeecCCCCceEEEEEcCCCCeEEEE
Confidence 876 111 1111124568899999976666443
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.51 E-value=3.5e-12 Score=114.67 Aligned_cols=216 Identities=12% Similarity=-0.014 Sum_probs=153.0
Q ss_pred CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCC-CcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeecc-
Q psy14815 101 CGNFIASASFDATTAVWDKRSGQFECNATLEGHE-NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAH- 178 (479)
Q Consensus 101 ~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~- 178 (479)
.+++|++++.++.|.+||.++++ .+..+..+. ..+.++.++|+|++++ +.++.|..||. +++ .+..+..+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~--~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~---~~W~~~~~~ 75 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKE--IVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGR---ELWNIAAPA 75 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTE--EEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSC---EEEEEECCT
T ss_pred CCcEEEeeCCCCEEEEEECCCCe--EEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCC---EEEEEcCCC
Confidence 45789999999999999999997 456666655 4688999999999888 45778999998 553 33344433
Q ss_pred ccceeEEEEecCCCEEEEEEc-CCcEEEEecCCcccceEeeee--ecCCCccEEEEEEccCCCEEEEeeCCCeEEEEecc
Q psy14815 179 IQDVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWINFAT--LKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY 255 (479)
Q Consensus 179 ~~~v~~l~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 255 (479)
...+.++.+.++|+++++.+. ++.|..+|.. ++..+..... ...+......+++.++|+++++...++.|..||..
T Consensus 76 ~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 76 GCEMQTARILPDGNALVAWCGHPSTILEVNMK-GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp TCEEEEEEECTTSCEEEEEESTTEEEEEECTT-SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred CccccccEECCCCCEEEEecCCCCEEEEEeCC-CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence 346788999999999999887 7778888763 3322221110 01222344556789999999999999999999973
Q ss_pred CCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEecccc---
Q psy14815 256 KPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR--- 332 (479)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~--- 332 (479)
+ +.+.++... ..+.++.+.+++.++++++.++.|..+|..+++ .+.+...
T Consensus 155 -G---------------~~~w~~~~~--~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~---------~~w~~~~~~~ 207 (276)
T 3no2_A 155 -G---------------QLLNSVKLS--GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNR---------IVRRVNANDI 207 (276)
T ss_dssp -S---------------CEEEEEECS--SCCCEEEECTTSCEEEECBTTSEEEEECTTTCC---------EEEEEEGGGS
T ss_pred -C---------------CEEEEEECC--CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCc---------EEEEecCCCC
Confidence 2 344555542 345677888999999999888899999999887 2322211
Q ss_pred -c-cccceeEEEecCCCCCCCc
Q psy14815 333 -A-HNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 333 -~-h~~~v~~~~~sp~~~~l~~ 352 (479)
+ ....+..++..++|..+..
T Consensus 208 ~~~~l~~~~~~~~~~~G~i~v~ 229 (276)
T 3no2_A 208 EGVQLFFVAQLFPLQNGGLYIC 229 (276)
T ss_dssp BSCCCSEEEEEEECTTSCEEEE
T ss_pred CCccccccccceEcCCCCEEEE
Confidence 1 1233677888888876644
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=3.1e-12 Score=130.90 Aligned_cols=246 Identities=11% Similarity=0.100 Sum_probs=157.6
Q ss_pred ccccceEEEEECCCCCeEEEe-----eCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 9 GHQGRVWNVSWNPQGTMISSC-----GEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~-----~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+|...+..++|||||++||-+ +...+|++||+++++.+...
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~---------------------------------- 171 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP---------------------------------- 171 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE----------------------------------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc----------------------------------
Confidence 466789999999999998843 33357999999877643210
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCC-------------eEEEEECCCCeEEEeEEEe--C-CCCcEEEEEEcCCCC
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDA-------------TTAVWDKRSGQFECNATLE--G-HENEVKSVTWSKNGQ 147 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg-------------~i~iwd~~~~~~~~~~~~~--~-~~~~v~~l~~~~~~~ 147 (479)
-+......++|+ |++.|+.++.+. .|++|++.+++......+. . +.....++.|+|||+
T Consensus 172 ----~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~ 246 (693)
T 3iuj_A 172 ----LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDR 246 (693)
T ss_dssp ----EEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSC
T ss_pred ----cCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCC
Confidence 000112457899 999999988774 4999999876532223333 2 344578899999999
Q ss_pred EEEEEeC----CCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEE-cC---CcEEEEecCCcccceEeee
Q psy14815 148 FLATCSR----DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-YD---DTVKLFKEDKAEADWINFA 219 (479)
Q Consensus 148 ~l~~~~~----dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~d---g~i~i~d~~~~~~~~~~~~ 219 (479)
+|+.... ...|.++|+.++. .....+..+....... +++++..|+..+ .+ +.|..+|+.++... ...
T Consensus 247 ~l~~~~~~~~~~~~i~~~d~~~~~--~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~--~~~ 321 (693)
T 3iuj_A 247 FLLISAANSTSGNRLYVKDLSQEN--APLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPA--HWR 321 (693)
T ss_dssp EEEEEEESSSSCCEEEEEETTSTT--CCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGG--GCE
T ss_pred EEEEEEccCCCCcEEEEEECCCCC--CceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcc--ccE
Confidence 8765443 2479999987753 1233344444444444 566665555444 33 57999999875431 112
Q ss_pred eecCCCccEEEEEEccCCCEEEEeeC-CC--eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC
Q psy14815 220 TLKSHTSTVWSLAFDRIGSRLATCSD-DA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 296 (479)
Q Consensus 220 ~~~~~~~~v~~~~~~~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~ 296 (479)
.+..|...+. .|++++++|+.... ++ .|++|++... ....+.......+..+.++++++
T Consensus 322 ~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~----------------~~~~l~~p~~~~~~~~~~~~d~~ 383 (693)
T 3iuj_A 322 DLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGK----------------RVREVALPGLGSVSGFNGKHDDP 383 (693)
T ss_dssp EEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSC----------------EEEEECCSSSSEEEECCCCTTCS
T ss_pred EEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCC----------------eeEEeecCCCceEEeeecCCCCC
Confidence 3445555554 88899988876654 43 6888886421 12333322245677888888888
Q ss_pred eEEEEeCC----CeEEEcccCCCC
Q psy14815 297 LIATACGD----DAIRIFKENPEA 316 (479)
Q Consensus 297 ~l~~~~~d----g~i~vw~~~~~~ 316 (479)
.++....+ +.++.||+.+++
T Consensus 384 ~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 384 ALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp CEEEEEECSSSCCEEEEECTTTCC
T ss_pred EEEEEecCCCCCCEEEEEECCCCe
Confidence 76665544 789999987664
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.47 E-value=1.5e-10 Score=108.65 Aligned_cols=244 Identities=10% Similarity=0.034 Sum_probs=156.1
Q ss_pred EEEECCCCCeEEEee----------CCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 16 NVSWNPQGTMISSCG----------EDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 16 ~l~~s~~~~~l~t~~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
.++++|||++++.+. .++.|.+||..+.+.+..+.... . ..
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~-----------------------~----~~-- 120 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPD-----------------------A----PR-- 120 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCC-----------------------c----cc--
Confidence 899999999988875 35778999987766554432100 0 00
Q ss_pred ccccCCcEEEEEECCCCCEEEEEEC--CCeEEEEECCCCeEEEeEE-EeCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEE
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASF--DATTAVWDKRSGQFECNAT-LEGHENEVKSVTWSKNG-QFLATCSRDKSVWVW 161 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~--dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~vw 161 (479)
..+......++|+|||++|+++.. ++.|.++| .+++. ... +.. .. ++.+.|++ +.+++.+.||.+.++
T Consensus 121 -~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~--~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~v 192 (373)
T 2mad_H 121 -FDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSS--DDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKT 192 (373)
T ss_pred -cccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCE--EeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEE
Confidence 001123457899999999998874 47899999 98863 344 332 11 24455544 456677789999999
Q ss_pred EeCCCCceeeeee--eeccccce-eEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC----------CCccE
Q psy14815 162 EVGEEDEYECAAV--INAHIQDV-KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS----------HTSTV 228 (479)
Q Consensus 162 d~~~~~~~~~~~~--~~~~~~~v-~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----------~~~~v 228 (479)
|. +++....... ......++ ....+.+++..++..+..+.+.+.|+...... ....+.. .....
T Consensus 193 d~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~--v~~~~~~~~~~~~~~~~~p~g~ 269 (373)
T 2mad_H 193 DH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGAT--NKAPIDALSGGRKADTWRPGGW 269 (373)
T ss_pred EC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcce--EeeeeeecCCcccccceecCce
Confidence 99 6543211110 00111121 23456676655555557889999998754321 1111110 12234
Q ss_pred EEEEEccCCCEEEEeeC----------CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC-e
Q psy14815 229 WSLAFDRIGSRLATCSD----------DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-L 297 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~ 297 (479)
..+.++|+++.++.+.. .+.|.++|+. +.+.+.++.. ......++|+|||+ +
T Consensus 270 ~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~---------------t~~vv~~i~~--g~~p~~i~~s~Dg~~~ 332 (373)
T 2mad_H 270 QQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGL---------------VGQTSSQISL--GHDVDAISVAQDGGPD 332 (373)
T ss_pred EeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECC---------------CCEEEEEEEC--CCCcCeEEECCCCCeE
Confidence 45788999988877653 3579999973 3355666654 34688999999999 7
Q ss_pred EEEEe-CCCeEEEcccCCCC
Q psy14815 298 IATAC-GDDAIRIFKENPEA 316 (479)
Q Consensus 298 l~~~~-~dg~i~vw~~~~~~ 316 (479)
++++. .++.|.+||..+++
T Consensus 333 l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 333 LYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred EEEEcCCCCeEEEEECCCCC
Confidence 77777 58999999999987
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.47 E-value=7.8e-11 Score=107.39 Aligned_cols=235 Identities=11% Similarity=0.078 Sum_probs=151.9
Q ss_pred cCCcEEEEEECCCC-CEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCC
Q psy14815 89 HQRTIRETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 167 (479)
Q Consensus 89 ~~~~v~~v~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~ 167 (479)
...-..+..|++++ .++++...++.|..||..+++. ..+. ....+.++++++++++++ +. ++.|.+||..+++
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~---~~~~-~~~~~~~i~~~~dG~l~v-~~-~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV---QRVT-MDAPVSSVALRQSGGYVA-TI-GTKFCALNWKEQS 84 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE---EEEE-CSSCEEEEEEBTTSSEEE-EE-TTEEEEEETTTTE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE---EEEe-CCCceEEEEECCCCCEEE-EE-CCeEEEEECCCCc
Confidence 34456688999965 4556666688999999998763 2222 346799999999999544 44 5679999987653
Q ss_pred ceeeeeeeec--cccceeEEEEecCCCEEEEEEcC---------CcEEEEecCCcccceEeeeeecCCCccEEEEEEccC
Q psy14815 168 EYECAAVINA--HIQDVKKVRFHPFDNILASASYD---------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 236 (479)
Q Consensus 168 ~~~~~~~~~~--~~~~v~~l~~~~~~~~l~~~~~d---------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 236 (479)
. ..+..... ....++.++++|+|+++++.... ..-.+|.+..... ...+.........++|+|+
T Consensus 85 ~-~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~----~~~~~~~~~~pngi~~spd 159 (297)
T 3g4e_A 85 A-VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH----VKKYFDQVDISNGLDWSLD 159 (297)
T ss_dssp E-EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC----EEEEEEEESBEEEEEECTT
T ss_pred E-EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC----EEEEeeccccccceEEcCC
Confidence 2 22221111 12347889999999976654332 2335555443221 1112223345678999999
Q ss_pred CCEEE-EeeCCCeEEEEeccC-CCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCC
Q psy14815 237 GSRLA-TCSDDATVKIWKEYK-PGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 314 (479)
Q Consensus 237 ~~~l~-s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~ 314 (479)
++.|+ +.+.++.|.+|++.. .... ...+....+... ......++++++|.+.++...++.|..||..+
T Consensus 160 g~~lyv~~~~~~~i~~~~~d~~~G~~---------~~~~~~~~~~~~-~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~t 229 (297)
T 3g4e_A 160 HKIFYYIDSLSYSVDAFDYDLQTGQI---------SNRRSVYKLEKE-EQIPDGMCIDAEGKLWVACYNGGRVIRLDPVT 229 (297)
T ss_dssp SCEEEEEEGGGTEEEEEEECTTTCCE---------EEEEEEEECCGG-GCEEEEEEEBTTSCEEEEEETTTEEEEECTTT
T ss_pred CCEEEEecCCCCcEEEEeccCCCCcc---------cCcEEEEECCCC-CCCCCeeEECCCCCEEEEEcCCCEEEEEcCCC
Confidence 98775 455678899999742 1110 111222333332 35678999999998888887888999999987
Q ss_pred CCCCCCceeeEEEeccccccccceeEEEec-CCCCCCCccc
Q psy14815 315 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWN-PVVPEPQKTN 354 (479)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s-p~~~~l~~~~ 354 (479)
++ ++..+ ..+...+++++|. |+++.|..+.
T Consensus 230 G~---------~~~~i-~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 230 GK---------RLQTV-KLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp CC---------EEEEE-ECSSSBEEEEEEESGGGCEEEEEE
T ss_pred ce---------EEEEE-ECCCCCceEEEEeCCCCCEEEEEc
Confidence 76 33333 3445679999998 8988875443
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.47 E-value=6.1e-11 Score=110.01 Aligned_cols=292 Identities=12% Similarity=0.076 Sum_probs=182.7
Q ss_pred EEECCCCCeEEEeeC-----CCcEEEEecccccccccccC--------CCccceEEEee----------cCCcEEEecCC
Q psy14815 17 VSWNPQGTMISSCGE-----DKNIRLWVMVIREPYEKLHG--------LPVETSLRQLV----------EDKNIRLWGKE 73 (479)
Q Consensus 17 l~~s~~~~~l~t~~~-----dg~v~iwd~~~~~~~~~~~~--------~~~~~~~~~~~----------~~~~i~~w~~~ 73 (479)
....|+++.++.... ++.|.+.|..+++.+..+.. .+++..++... .++.+.+||..
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~ 117 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV 117 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCcEEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 445789998887764 67999999998887766543 35555555544 35679999988
Q ss_pred CCCCceeeeEEeccc----cCCcEEEEEECCCCCEEEEEEC--CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCC
Q psy14815 74 SFGNKFTAKAILSDG----HQRTIRETAWSPCGNFIASASF--DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 147 (479)
Q Consensus 74 ~~~~~~~~~~~~~~~----~~~~v~~v~~~~~~~~l~t~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 147 (479)
+... ........+ .......++++|||++++++.. ++.|.++|+.+++ .+..+.... . ...+....+
T Consensus 118 t~~v--~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~--vv~tI~v~g--~-~~~~P~g~~ 190 (386)
T 3sjl_D 118 TLLP--TADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA--FKRMLDVPD--C-YHIFPTAPD 190 (386)
T ss_dssp TCCE--EEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTE--EEEEEECCS--E-EEEEEEETT
T ss_pred CCeE--EEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCc--EEEEEECCC--c-ceeecCCCc
Confidence 5321 111111110 1224557899999999988874 6899999999997 344443211 1 223333456
Q ss_pred EEEEEeCCCcEEEEEeCCCCceeeee--eeecccccee-EEEEe-cCCCEEEEEEcCCcEEEEecCCcccceEeeeeec-
Q psy14815 148 FLATCSRDKSVWVWEVGEEDEYECAA--VINAHIQDVK-KVRFH-PFDNILASASYDDTVKLFKEDKAEADWINFATLK- 222 (479)
Q Consensus 148 ~l~~~~~dg~i~vwd~~~~~~~~~~~--~~~~~~~~v~-~l~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~- 222 (479)
.+++.+.||.+.+.++.......... .+.....++. ...|. ++|++++ .+.+|.|.+.|..+.... ....+.
T Consensus 191 ~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~--v~~~~~~ 267 (386)
T 3sjl_D 191 TFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAK--FLPAVEA 267 (386)
T ss_dssp EEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCE--ECCCEES
T ss_pred eeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcce--eecceec
Confidence 77788889999999987632211111 1111111221 24564 5675544 566899999999765421 111111
Q ss_pred ---------CCCccEEEEEEccCCCEEEEeeC----------CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccc
Q psy14815 223 ---------SHTSTVWSLAFDRIGSRLATCSD----------DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 283 (479)
Q Consensus 223 ---------~~~~~v~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (479)
........++++++++.++.... .+.|.+.|+.+ .+.+.++.. +
T Consensus 268 ~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t---------------~kv~~~i~v--g 330 (386)
T 3sjl_D 268 LTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKT---------------GERLAKFEM--G 330 (386)
T ss_dssp SCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTT---------------CCEEEEEEE--E
T ss_pred cccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCC---------------CeEEEEEEC--C
Confidence 01122334777999998887643 24688888743 355666654 3
Q ss_pred ccEEEEEecCCCC-eEEEEe-CCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCC
Q psy14815 284 RTIYDISWCHLTD-LIATAC-GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV 346 (479)
Q Consensus 284 ~~i~~l~~~~~~~-~l~~~~-~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 346 (479)
..+++|++++|++ +|++++ .++.|.++|..+++ .+.++. -.+..+.+.+++|
T Consensus 331 ~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k---------~~~~i~--~~~~p~~l~~s~d 384 (386)
T 3sjl_D 331 HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE---------ELRSVN--QLGHGPQVITTAD 384 (386)
T ss_dssp EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC---------EEEEEC--CCCSSCCEEEECC
T ss_pred CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc---------EEEEec--CCCCCceeEECCc
Confidence 4788999999997 666654 48999999999988 444442 2345567788877
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.47 E-value=2.2e-12 Score=120.24 Aligned_cols=184 Identities=11% Similarity=0.021 Sum_probs=133.9
Q ss_pred ceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCc
Q psy14815 13 RVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRT 92 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 92 (479)
.++.+++++...++++|+.++ +++|++...+....- .. .. ..... ...+..
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~--~~----------------------~~-~~~~~--~~~lp~- 89 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITS--DS----------------------TP-LTFKW--EKEIPD- 89 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHS--SS----------------------CC-CCCSE--EEECTT-
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhcc--cc----------------------cc-ccceE--EeeCCC-
Confidence 689999999999999999885 667987654321110 00 00 00000 123455
Q ss_pred EEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeee
Q psy14815 93 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA 172 (479)
Q Consensus 93 v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 172 (479)
|+.++| ++.+|+++ .++.|++||+.+.. .......+...+.++.+.+. .+++++.||.+.+||+.+... .
T Consensus 90 V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~--~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~---~ 159 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS-TRNALYSLDLEELS--EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKST---K 159 (388)
T ss_dssp EEEEEE--ETTEEEEE-ESSEEEEEESSSTT--CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCE---E
T ss_pred eeEEEE--CCCEEEEE-cCCcEEEEEchhhh--ccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcc---c
Confidence 999999 89999999 78999999998765 33345567778888888764 389999999999999997642 1
Q ss_pred eeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeee------c---CCCccEEEEEEccCCCEEEEe
Q psy14815 173 AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL------K---SHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 173 ~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------~---~~~~~v~~~~~~~~~~~l~s~ 243 (479)
. +...|+|++|+|+| ++.|..||.+++|+....... ....+ . +|...|.++.|.+++.++++-
T Consensus 160 ~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~--~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 160 Q----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEME--KQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp E----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEE--EEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred c----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCcccc--ccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 1 45679999999999 788999999999988755421 01222 2 478899999999999888763
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.47 E-value=1.3e-11 Score=113.46 Aligned_cols=233 Identities=11% Similarity=0.097 Sum_probs=151.0
Q ss_pred CCcEEEEEECCCCCEEEE-------EECCCeEEEEECCCCeEEEeEE--EeCCCCcEEEEEEcCC-CCEEEEEeCCCcEE
Q psy14815 90 QRTIRETAWSPCGNFIAS-------ASFDATTAVWDKRSGQFECNAT--LEGHENEVKSVTWSKN-GQFLATCSRDKSVW 159 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t-------~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~v~~l~~~~~-~~~l~~~~~dg~i~ 159 (479)
-....+++|++++.++++ +..++.|.+||..+++...... ..++...+.++.++++ ++ ++.++..+.|.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~~~~~~l~ 95 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ-LFVADMRLGLL 95 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE-EEEEETTTEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc-EEEEECCCCEE
Confidence 346688999999988887 5778999999988886432211 0124467899999998 65 44444455788
Q ss_pred EEEeCCCCceeee-eee-e-ccccceeEEEEecCCCEEEEEEcC---------------CcEEEEecCCcccceEeeeee
Q psy14815 160 VWEVGEEDEYECA-AVI-N-AHIQDVKKVRFHPFDNILASASYD---------------DTVKLFKEDKAEADWINFATL 221 (479)
Q Consensus 160 vwd~~~~~~~~~~-~~~-~-~~~~~v~~l~~~~~~~~l~~~~~d---------------g~i~i~d~~~~~~~~~~~~~~ 221 (479)
+||.. ++. ... ... . .....+.+++++++++++++...+ +.|..||.. ++. ..+
T Consensus 96 ~~d~~-g~~-~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-----~~~ 167 (314)
T 1pjx_A 96 VVQTD-GTF-EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM-----IQV 167 (314)
T ss_dssp EEETT-SCE-EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE-----EEE
T ss_pred EEeCC-CCE-EEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE-----EEe
Confidence 99987 432 211 111 1 112357899999999888776655 567777765 321 111
Q ss_pred cCCCccEEEEEEc----cCCCEEEEe-eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccc-ccEEEEEecCCC
Q psy14815 222 KSHTSTVWSLAFD----RIGSRLATC-SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG-RTIYDISWCHLT 295 (479)
Q Consensus 222 ~~~~~~v~~~~~~----~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~l~~~~~~ 295 (479)
..+......++|+ ++++.++.+ ..++.|.+||....... ........+..+ . ..+..++++++|
T Consensus 168 ~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~---------~~~~~~~~~~~~-~~~~p~~i~~d~~G 237 (314)
T 1pjx_A 168 DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKI---------ENKKVWGHIPGT-HEGGADGMDFDEDN 237 (314)
T ss_dssp EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEE---------EEEEEEEECCCC-SSCEEEEEEEBTTC
T ss_pred ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcc---------ccceEEEECCCC-CCCCCCceEECCCC
Confidence 2233456789999 999766554 56789999997521110 001122233332 2 567889999999
Q ss_pred CeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCC
Q psy14815 296 DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 296 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 351 (479)
.++++...++.|.+|+.++++ .......+...+.+++|+|+++.|.
T Consensus 238 ~l~v~~~~~~~i~~~d~~~g~----------~~~~~~~~~~~~~~i~~~~dg~~l~ 283 (314)
T 1pjx_A 238 NLLVANWGSSHIEVFGPDGGQ----------PKMRIRCPFEKPSNLHFKPQTKTIF 283 (314)
T ss_dssp CEEEEEETTTEEEEECTTCBS----------CSEEEECSSSCEEEEEECTTSSEEE
T ss_pred CEEEEEcCCCEEEEEcCCCCc----------EeEEEeCCCCCceeEEECCCCCEEE
Confidence 988888788999999988554 1111123446789999999998553
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.46 E-value=2.2e-12 Score=120.25 Aligned_cols=175 Identities=11% Similarity=0.054 Sum_probs=130.6
Q ss_pred cEEEEEECCCCCEEEEEECCCeEEEEECCCCe---------EEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy14815 92 TIRETAWSPCGNFIASASFDATTAVWDKRSGQ---------FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~---------~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd 162 (479)
+++.+++++...++++|+.+ .+.+|++...+ ........ +.. |+.++| +++.|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~-lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKE-IPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEE-CTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEee-CCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 68999999999999999987 56669865332 22222333 556 999999 89999999 889999999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
+++... ......+..++.++.+.+. .+++++.||.|.+||+..+.. . . +...|++++|+|+| ++.
T Consensus 113 v~sl~~---~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~----~-~---~~~~Vs~v~WSpkG--~~v 177 (388)
T 1xip_A 113 LEELSE---FRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKST----K-Q---LAQNVTSFDVTNSQ--LAV 177 (388)
T ss_dssp SSSTTC---EEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCE----E-E---EEESEEEEEECSSE--EEE
T ss_pred chhhhc---cCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcc----c-c---ccCCceEEEEcCCc--eEE
Confidence 988743 2234556677888877654 388899999999999986553 1 1 45689999999999 678
Q ss_pred eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEE------e---ccccccEEEEEecCCCCeEEEE
Q psy14815 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL------S---GHHGRTIYDISWCHLTDLIATA 301 (479)
Q Consensus 243 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~i~~l~~~~~~~~l~~~ 301 (479)
|..||++++|+...... ....++ . +| ...|.++.|.+++.++++=
T Consensus 178 g~~dg~i~~~~~~~~~~-------------~~k~~I~~Pp~~~~~~~~-~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 178 LLKDRSFQSFAWRNGEM-------------EKQFEFSLPSELEELPVE-EYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EETTSCEEEEEEETTEE-------------EEEEEECCCHHHHTSCTT-TSEEEEEEESSSSEEEEEE
T ss_pred EEcCCcEEEEcCCCccc-------------cccceecCCcccccccCC-CeeEEEEEEecCCeEEEEE
Confidence 99999999998743321 002333 2 23 6789999999999988763
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.45 E-value=5.5e-11 Score=113.30 Aligned_cols=242 Identities=14% Similarity=0.105 Sum_probs=158.9
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR 91 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 91 (479)
.....|+|+++++++++...++.|++||..++...... .. ..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~-------------------------------------~~-~~ 172 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVH-------------------------------------PG-FK 172 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEE-------------------------------------ET-CC
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEee-------------------------------------cc-CC
Confidence 46788999999987777777789999987654432111 11 12
Q ss_pred cEEEEEECCCCCEEEEEECCC--eEEEEECCCCeEE-EeEEEeC-CCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCC
Q psy14815 92 TIRETAWSPCGNFIASASFDA--TTAVWDKRSGQFE-CNATLEG-HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 167 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~dg--~i~iwd~~~~~~~-~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~ 167 (479)
... ++|+++++.|+++..++ .|.+++..++... ....+.. ....+.+++++|++..|+++..++.|+.||..+..
T Consensus 173 ~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~ 251 (409)
T 3hrp_A 173 GGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQE 251 (409)
T ss_dssp BCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCC
T ss_pred CCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCC
Confidence 223 89999999999988866 7999988765421 1111112 44567899999955566667778899999998763
Q ss_pred ceeeeee--eeccccc--eeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEeeeeec------------CCCccEEE
Q psy14815 168 EYECAAV--INAHIQD--VKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLK------------SHTSTVWS 230 (479)
Q Consensus 168 ~~~~~~~--~~~~~~~--v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------------~~~~~v~~ 230 (479)
. ..... ..+.... ...++|+|+ +.++++-..++.|+.|+...... .+.... ..-.....
T Consensus 252 ~-~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~---~~~g~~~~~g~~dg~~~~~~~~~P~g 327 (409)
T 3hrp_A 252 V-TLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECE---WFCGSATQKTVQDGLREEALFAQPNG 327 (409)
T ss_dssp E-EEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEE---EEEECTTCCSCBCEEGGGCBCSSEEE
T ss_pred E-EEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEE---EEEeCCCCCCcCCCcccccEeCCCeE
Confidence 2 11110 1111111 238999995 66666666788999998764311 111100 01234789
Q ss_pred EEEccCCCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc--------------ccccEEEEEecCCC
Q psy14815 231 LAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH--------------HGRTIYDISWCHLT 295 (479)
Q Consensus 231 ~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~i~~l~~~~~~ 295 (479)
++++++|+++++-+ .++.|+.|++..+. +.++.++ .-.....+++++++
T Consensus 328 ia~d~dG~lyvad~~~~~~I~~~~~~~G~----------------v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g 391 (409)
T 3hrp_A 328 MTVDEDGNFYIVDGFKGYCLRKLDILDGY----------------VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEG 391 (409)
T ss_dssp EEECTTCCEEEEETTTTCEEEEEETTTTE----------------EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSS
T ss_pred EEEeCCCCEEEEeCCCCCEEEEEECCCCE----------------EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCC
Confidence 99999999777777 78899999963321 1222221 02357899999998
Q ss_pred CeEEEEeCCCeEEEccc
Q psy14815 296 DLIATACGDDAIRIFKE 312 (479)
Q Consensus 296 ~~l~~~~~dg~i~vw~~ 312 (479)
.++++-..++.|+.+++
T Consensus 392 ~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 392 GYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEEESTTCEEEEEEE
T ss_pred CEEEEECCCCeEEEEEe
Confidence 88888888888888765
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.44 E-value=5.6e-11 Score=108.81 Aligned_cols=236 Identities=12% Similarity=0.051 Sum_probs=149.7
Q ss_pred ccccccccceEEEEECCCCC-eEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 5 QTLKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~-~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
..+..+........|+|+++ ++++...++.|..|+. +++. ..+
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~~~---------------------------------- 81 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV-DVL---------------------------------- 81 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE-EEE----------------------------------
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE-EEE----------------------------------
Confidence 44555566778899999998 5666667888999975 2221 111
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEE-EeCC-CCcEEEEEEcCCCCEEEE----EeC---
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNAT-LEGH-ENEVKSVTWSKNGQFLAT----CSR--- 154 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~-~~~~-~~~v~~l~~~~~~~~l~~----~~~--- 154 (479)
..+...+..++++++|+++++...++.|.+|+.. ++...... ..+. ...+..+.+.++|++.++ |..
T Consensus 82 ---~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~ 157 (305)
T 3dr2_A 82 ---LDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPS 157 (305)
T ss_dssp ---EESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGG
T ss_pred ---eCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccc
Confidence 1234568899999999877666566899999986 54332221 1111 134678999999998776 332
Q ss_pred ----------CCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcC------CcEEEEecCCcccceEee
Q psy14815 155 ----------DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD------DTVKLFKEDKAEADWINF 218 (479)
Q Consensus 155 ----------dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~ 218 (479)
.+.|..||..+++. .. +. .......++|+|+++.|+.+... +.|.+|++..........
T Consensus 158 ~~~~~~~~~~~~~v~~~d~~~g~~-~~---~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~ 232 (305)
T 3dr2_A 158 QGCPADPELAHHSVYRLPPDGSPL-QR---MA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRH 232 (305)
T ss_dssp GSCCCCCSSSCEEEEEECSSSCCC-EE---EE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEE
T ss_pred cccccccccCCCeEEEEcCCCCcE-EE---Ee-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeE
Confidence 24566666655432 11 11 33456789999999988777665 689999987533110011
Q ss_pred eeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeE
Q psy14815 219 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI 298 (479)
Q Consensus 219 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l 298 (479)
...........++++++|+. .+++.+ .|.+|+.. .+.+..+... . .+.+++|+++++.|
T Consensus 233 -~~~~~~~~pdgi~~d~~G~l-wv~~~~-gv~~~~~~----------------g~~~~~~~~~-~-~~~~~~f~~d~~~L 291 (305)
T 3dr2_A 233 -FASVPDGLPDGFCVDRGGWL-WSSSGT-GVCVFDSD----------------GQLLGHIPTP-G-TASNCTFDQAQQRL 291 (305)
T ss_dssp -EECCSSSCCCSEEECTTSCE-EECCSS-EEEEECTT----------------SCEEEEEECS-S-CCCEEEECTTSCEE
T ss_pred -EEECCCCCCCeEEECCCCCE-EEecCC-cEEEECCC----------------CCEEEEEECC-C-ceeEEEEeCCCCEE
Confidence 11112334567899999984 445444 48999852 1334455543 2 58899999998888
Q ss_pred EEEeCCCe
Q psy14815 299 ATACGDDA 306 (479)
Q Consensus 299 ~~~~~dg~ 306 (479)
..++.++.
T Consensus 292 ~it~~~~l 299 (305)
T 3dr2_A 292 FITGGPCL 299 (305)
T ss_dssp EEEETTEE
T ss_pred EEEcCCeE
Confidence 87776543
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=99.43 E-value=5.4e-10 Score=103.23 Aligned_cols=191 Identities=10% Similarity=0.007 Sum_probs=121.5
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC--CCCcEEEEEEcCCCCEEEEEeCC----CcEEEEEe
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG--HENEVKSVTWSKNGQFLATCSRD----KSVWVWEV 163 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~l~~~~~d----g~i~vwd~ 163 (479)
...+.+++|+++++++++. . ..|.+||..+++...+..... ....+.++.++|+|+++++...+ +...+|.+
T Consensus 89 ~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~ 166 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHV 166 (326)
T ss_dssp SSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEE
T ss_pred CCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEE
Confidence 3578999999999877654 4 459999998887433322111 12358899999999866654322 22344444
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEE-EcCCcEEEEecC--Cc-ccc-eEeeeeecCCCccEEEEEEccCCC
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASA-SYDDTVKLFKED--KA-EAD-WINFATLKSHTSTVWSLAFDRIGS 238 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~i~d~~--~~-~~~-~~~~~~~~~~~~~v~~~~~~~~~~ 238 (479)
.++ ... .+.........++|+|+++.++.+ +.++.|.+||+. ++ ... ...+..+.........++++++|.
T Consensus 167 ~~g-~~~---~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~ 242 (326)
T 2ghs_A 167 AKG-KVT---KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH 242 (326)
T ss_dssp ETT-EEE---EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC
T ss_pred eCC-cEE---EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC
Confidence 332 211 222233456789999999876555 456889999986 44 211 112223333445678899999998
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec-CCCCeEEEEeC
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC-HLTDLIATACG 303 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~~l~~~~~ 303 (479)
+.++...++.|.+||. .. +.+..+... ...+++++|+ ++++.|++++.
T Consensus 243 lwva~~~~~~v~~~d~-~g---------------~~~~~i~~~-~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 243 IWNARWGEGAVDRYDT-DG---------------NHIARYEVP-GKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEEEEETTTEEEEECT-TC---------------CEEEEEECS-CSBEEEEEEESTTSCEEEEEEB
T ss_pred EEEEEeCCCEEEEECC-CC---------------CEEEEEECC-CCCcEEEEEecCCCCEEEEEec
Confidence 7777766788999986 21 223444443 4579999998 88776655544
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.40 E-value=6.9e-10 Score=100.96 Aligned_cols=196 Identities=6% Similarity=-0.078 Sum_probs=132.5
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCce
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 169 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 169 (479)
...+.++++.+++.+.++...++.|..+|.. ++.. ...+......+.++++.++++..++...++.|..+|. +++.
T Consensus 103 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~- 178 (300)
T 2qc5_A 103 DSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKL- 178 (300)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE-
T ss_pred CCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcE-
Confidence 4678899999999888877768899999987 5532 2233334567899999999996666656788999998 3321
Q ss_pred eeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeE
Q psy14815 170 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 249 (479)
Q Consensus 170 ~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i 249 (479)
.. .........+..+++++++++.++....+.|.+||.. +.. . ......+...+.+++++++|+..++...++.|
T Consensus 179 ~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~--~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i 253 (300)
T 2qc5_A 179 EE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTT-GEI--S-EYDIPTPNARPHAITAGKNSEIWFTEWGANQI 253 (300)
T ss_dssp EE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT-CCE--E-EEECSSTTCCEEEEEECSTTCEEEEETTTTEE
T ss_pred EE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCC-CcE--E-EEECCCCCCCceEEEECCCCCEEEeccCCCeE
Confidence 11 1122334567899999999877766667789999983 331 1 12233445678899999999876666667899
Q ss_pred EEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 250 KIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 250 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
..||.. . .. . ...+... ...+.++++.++|.++++.. . .|..++.
T Consensus 254 ~~~~~~-g-~~------------~-~~~~~~~-~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 254 GRITND-N-TI------------Q-EYQLQTE-NAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp EEECTT-S-CE------------E-EEECCST-TCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred EEECCC-C-cE------------E-EEECCcc-CCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 999862 1 10 1 1112211 34678899999998766655 4 6666654
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.40 E-value=1e-09 Score=103.09 Aligned_cols=224 Identities=9% Similarity=-0.054 Sum_probs=139.9
Q ss_pred EEEECCCCCEEEEEE----------CCCeEEEEECCCCeEEEeEEEeCC-------CCcEEEEEEcCCCCEEEEEeC--C
Q psy14815 95 ETAWSPCGNFIASAS----------FDATTAVWDKRSGQFECNATLEGH-------ENEVKSVTWSKNGQFLATCSR--D 155 (479)
Q Consensus 95 ~v~~~~~~~~l~t~~----------~dg~i~iwd~~~~~~~~~~~~~~~-------~~~v~~l~~~~~~~~l~~~~~--d 155 (479)
.++++||+++++++. .++.|.+||..+.+. +..+... ......+.|+|||++|++++. +
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~--~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~ 147 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP--IADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAG 147 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcE--EEEEECCCccccccCCCccceEECCCCCEEEEEecCCC
Confidence 899999999999886 367899999988763 3333211 123458999999999999875 4
Q ss_pred CcEEEEEeCCCCceeeeee-eeccccceeEEEEecCC-CEEEEEEcCCcEEEEecCCcccceEeee-eecCCCcc-EEEE
Q psy14815 156 KSVWVWEVGEEDEYECAAV-INAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFA-TLKSHTST-VWSL 231 (479)
Q Consensus 156 g~i~vwd~~~~~~~~~~~~-~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~~~~-v~~~ 231 (479)
+.|.++| .+++. ... +.. . .++.+.|++ +.+++.+.||.+.++|. +++....... .......+ ....
T Consensus 148 ~~v~viD-~t~~~---~~~~i~~-~---~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~ 218 (373)
T 2mad_H 148 PAVGLVV-QGGSS---DDQLLSS-P---TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQP 218 (373)
T ss_pred CeEEEEE-CCCCE---EeEEcCC-C---ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecc
Confidence 7899999 87742 333 221 1 124455654 55677778999999999 6553211000 00011112 2234
Q ss_pred EEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEe---------ccccccEEEEEecCCCCeEEEEe
Q psy14815 232 AFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS---------GHHGRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 232 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~i~~l~~~~~~~~l~~~~ 302 (479)
.+.+++..++..+..+.+.+.|+...... .+..+. +........+.++|+++.+.++.
T Consensus 219 ~~~~~~~~~~~~~~~~~v~vid~~~~~~~-------------v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~ 285 (373)
T 2mad_H 219 AQANKSGRIVWPVYSGKILQADISAAGAT-------------NKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLT 285 (373)
T ss_pred eeEecCCEEEEEcCCceEEEEeccCCcce-------------EeeeeeecCCcccccceecCceEeEEECCCCCEEEEEe
Confidence 56666665555557788999998533211 011111 00122344578999988877765
Q ss_pred C----------CCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCC-CCCcc
Q psy14815 303 G----------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP-EPQKT 353 (479)
Q Consensus 303 ~----------dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~-~l~~~ 353 (479)
. ++.|.++|..+.+ .+.++..+ ....+++|+|||+ .+...
T Consensus 286 ~~~~~~~~~~~~~~V~VID~~t~~---------vv~~i~~g--~~p~~i~~s~Dg~~~l~v~ 336 (373)
T 2mad_H 286 SEQSAWKLHAAAKEVTSVTGLVGQ---------TSSQISLG--HDVDAISVAQDGGPDLYAL 336 (373)
T ss_pred ccCCcccccCCCCeEEEEECCCCE---------EEEEEECC--CCcCeEEECCCCCeEEEEE
Confidence 3 3579999999887 44444322 3588999999999 55443
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.5e-10 Score=110.27 Aligned_cols=203 Identities=9% Similarity=-0.023 Sum_probs=136.3
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC--cEEEEEeCCCCc
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK--SVWVWEVGEEDE 168 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg--~i~vwd~~~~~~ 168 (479)
.....++|+++++++++...++.|++||..+++... .... ..... ++|+++++.|+++..++ .|.+++......
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~--~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTT--VHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEE--EEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEE--eecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 468899999999877777778999999999886332 2232 23334 99999999999988866 788888776532
Q ss_pred eeeeeeeec-cccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeee--ecCCCccE--EEEEEccC-CCEEEE
Q psy14815 169 YECAAVINA-HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT--LKSHTSTV--WSLAFDRI-GSRLAT 242 (479)
Q Consensus 169 ~~~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~~~~v--~~~~~~~~-~~~l~s 242 (479)
......... ....+.+++++|++..|+.+..++.|+.||..++.. ..+.. ..++...- ..++|+|+ +.++++
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~--~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~ 284 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEV--TLIKQLELSGSLGTNPGPYLIYYFVDSNFYMS 284 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCE--EEEEECCCCSCCCCSSCCEEEEETTTTEEEEE
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCE--EEEecccccCCCCCCccccEEEeCCCCEEEEE
Confidence 222211112 345678899999555555577788999999986542 11111 11222211 38999995 555555
Q ss_pred eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc--------------ccccEEEEEecCCCCeEEEEe-CCCeE
Q psy14815 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH--------------HGRTIYDISWCHLTDLIATAC-GDDAI 307 (479)
Q Consensus 243 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~i~~l~~~~~~~~l~~~~-~dg~i 307 (479)
-..++.|+.|+.... ...+.++ .-.....++++++|.++++-+ .++.|
T Consensus 285 d~~~~~I~~~~~~g~-----------------~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I 347 (409)
T 3hrp_A 285 DQNLSSVYKITPDGE-----------------CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCL 347 (409)
T ss_dssp ETTTTEEEEECTTCC-----------------EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEE
T ss_pred eCCCCEEEEEecCCC-----------------EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEE
Confidence 567788999986321 1111111 023478999999999888877 88999
Q ss_pred EEcccCCCC
Q psy14815 308 RIFKENPEA 316 (479)
Q Consensus 308 ~vw~~~~~~ 316 (479)
+.|++..+.
T Consensus 348 ~~~~~~~G~ 356 (409)
T 3hrp_A 348 RKLDILDGY 356 (409)
T ss_dssp EEEETTTTE
T ss_pred EEEECCCCE
Confidence 999976664
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=99.38 E-value=9.3e-11 Score=110.79 Aligned_cols=240 Identities=12% Similarity=0.031 Sum_probs=145.0
Q ss_pred CCCCeEEEeeC-C----CcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEE
Q psy14815 21 PQGTMISSCGE-D----KNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 95 (479)
Q Consensus 21 ~~~~~l~t~~~-d----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~ 95 (479)
++++.++.... + ++|.++|..+++.+..+. .+ ..+ .
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~------------------------------------vG-~~P--g 122 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTD------------------------------------GG-FLP--H 122 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEE------------------------------------EC-SSC--E
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEE------------------------------------CC-CCC--c
Confidence 46666655543 2 688888888777665541 11 234 7
Q ss_pred EEECCCCCEEEEEE----------CCCeEEEEECCCCeEEEeEEEeCC-----CCcEEEEEEcCCCCEEEEEeC--CCcE
Q psy14815 96 TAWSPCGNFIASAS----------FDATTAVWDKRSGQFECNATLEGH-----ENEVKSVTWSKNGQFLATCSR--DKSV 158 (479)
Q Consensus 96 v~~~~~~~~l~t~~----------~dg~i~iwd~~~~~~~~~~~~~~~-----~~~v~~l~~~~~~~~l~~~~~--dg~i 158 (479)
++++||+++++++. .++.|.++|..+++......+.+. ......+.|+|||++++++.. ++.|
T Consensus 123 ia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~V 202 (426)
T 3c75_H 123 PVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAV 202 (426)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEE
T ss_pred eEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeE
Confidence 99999999888876 367899999999874333333201 123567899999999999874 5789
Q ss_pred EEEEeCCCCceeeeeeeec-c---ccceeEEEEecCCCE-------------------------------------EEEE
Q psy14815 159 WVWEVGEEDEYECAAVINA-H---IQDVKKVRFHPFDNI-------------------------------------LASA 197 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~-~---~~~v~~l~~~~~~~~-------------------------------------l~~~ 197 (479)
.+.|+.+.+....+..-.. + .+.-..+.++++|++ ++..
T Consensus 203 sVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~ 282 (426)
T 3c75_H 203 GVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWP 282 (426)
T ss_dssp EEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEE
T ss_pred EEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEE
Confidence 9999998743322221000 0 000111333333333 3333
Q ss_pred EcCCcEEEEecCCcccceEeeeeec-----C---CCccEEEEEEccCCCEEEEeeC----------CCeEEEEeccCCCC
Q psy14815 198 SYDDTVKLFKEDKAEADWINFATLK-----S---HTSTVWSLAFDRIGSRLATCSD----------DATVKIWKEYKPGN 259 (479)
Q Consensus 198 ~~dg~i~i~d~~~~~~~~~~~~~~~-----~---~~~~v~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~ 259 (479)
+..+.|.+.|.............+. . .......++++|+++.+++... ++.|.+.|+..
T Consensus 283 s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T--- 359 (426)
T 3c75_H 283 TYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAET--- 359 (426)
T ss_dssp BTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTT---
T ss_pred eCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCC---
Confidence 3344455555433221000000000 0 0011122688999888776542 35799999843
Q ss_pred CCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC-eEEEEe-CCCeEEEcccCCCC
Q psy14815 260 SAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATAC-GDDAIRIFKENPEA 316 (479)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~-~dg~i~vw~~~~~~ 316 (479)
.+.+.++.. +.....++|+|+++ +++++. .++.|.++|..+.+
T Consensus 360 ------------~kvv~~I~v--g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 360 ------------GERINKIEL--GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp ------------CCEEEEEEE--EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred ------------CeEEEEEEC--CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 355566654 33688999999999 888888 58999999999998
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.3e-10 Score=108.19 Aligned_cols=255 Identities=8% Similarity=-0.054 Sum_probs=155.6
Q ss_pred cceEEEEECCCCCeEEEee--CCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 12 GRVWNVSWNPQGTMISSCG--EDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
..+..++++|+|+++++.. .++.++||.+.+++ +..+... . .....+
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~------------------~------------~~~~~~ 65 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG-LIPFPPQ------------------S------------GNAIIT 65 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE-EEESCCC------------------C------------SSCCCC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCC-eecCCCc------------------c------------cCcccc
Confidence 6899999999999998864 23446777664322 1111000 0 001245
Q ss_pred CCcEEEEEECCCCCEEEEEEC-----CCeEEEEECCCCeEEEeEEEeC----CCCcEEEEEEcCCCCEEE-EEe---CCC
Q psy14815 90 QRTIRETAWSPCGNFIASASF-----DATTAVWDKRSGQFECNATLEG----HENEVKSVTWSKNGQFLA-TCS---RDK 156 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~-----dg~i~iwd~~~~~~~~~~~~~~----~~~~v~~l~~~~~~~~l~-~~~---~dg 156 (479)
...+..++++++++++++-.. ++.|.+||+.+++......+.. +...+..+++++++..++ +.. .++
T Consensus 66 ~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~ 145 (343)
T 2qe8_A 66 FDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKA 145 (343)
T ss_dssp CSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGC
T ss_pred eeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCC
Confidence 678999999999876665443 5799999999987433333321 223568999998655554 444 578
Q ss_pred cEEEEEeCCCCceeeeee------------eec--------------cccceeEEEEecCCCEEEEEEcCC-cEEEEecC
Q psy14815 157 SVWVWEVGEEDEYECAAV------------INA--------------HIQDVKKVRFHPFDNILASASYDD-TVKLFKED 209 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~------------~~~--------------~~~~v~~l~~~~~~~~l~~~~~dg-~i~i~d~~ 209 (479)
.|.+||+.+++....... ..+ -...+..++|+|+++.|+.+...+ .+..++..
T Consensus 146 ~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~ 225 (343)
T 2qe8_A 146 ALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSA 225 (343)
T ss_dssp EEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHH
T ss_pred eEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHH
Confidence 899999986643221100 000 012357899999999888887766 44444432
Q ss_pred C---ccc-ceEeee--eecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccc
Q psy14815 210 K---AEA-DWINFA--TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 283 (479)
Q Consensus 210 ~---~~~-~~~~~~--~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (479)
. +.. ...... ...++......++++++|..+++...++.|.+||...+ +..........
T Consensus 226 ~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G---------------~~~~~~~~~~~ 290 (343)
T 2qe8_A 226 DLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADR---------------AYKLLVTDEKL 290 (343)
T ss_dssp HHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTT---------------EEEEEEECGGG
T ss_pred HhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCC---------------CEEEEEECCce
Confidence 1 000 000000 11122334567899999998888888999999996221 11112222124
Q ss_pred ccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 284 RTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 284 ~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
..+.+++|.+++.++++.+..+.+.+|.-
T Consensus 291 ~~p~~va~~~~g~l~v~~~~~~~~~~f~~ 319 (343)
T 2qe8_A 291 SWTDSFNFGSDGYLYFDCNQLHHSAPLNA 319 (343)
T ss_dssp SCEEEEEECTTSCEEEEECCGGGSGGGBT
T ss_pred ecCCeeEECCCCcEEEEeCcccccccccc
Confidence 56899999999988888776666655553
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=99.36 E-value=7.7e-10 Score=102.21 Aligned_cols=227 Identities=10% Similarity=0.046 Sum_probs=144.3
Q ss_pred cEEEEEECCCC-CEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCcee
Q psy14815 92 TIRETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 170 (479)
Q Consensus 92 ~v~~v~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 170 (479)
-..+..|+|++ .++++...++.|..||..+++.. .+. ....+.++.|+++++++++. .+ .|.+||..+++. .
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~---~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~-~ 122 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT---VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVL-T 122 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE---EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCE-E
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE---EEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcE-E
Confidence 45678899975 45566667889999999988632 222 24579999999998866654 44 499999877642 2
Q ss_pred eeeeeec--cccceeEEEEecCCCEEEEEEc------CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 171 CAAVINA--HIQDVKKVRFHPFDNILASASY------DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 171 ~~~~~~~--~~~~v~~l~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
.+..... ....++.++++|+|+++++... .+.|..++ .++. ..+..+......++|+|+++.++.
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~-----~~~~~~~~~~~~i~~s~dg~~lyv 195 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKV-----TKLFADISIPNSICFSPDGTTGYF 195 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEE-----EEEEEEESSEEEEEECTTSCEEEE
T ss_pred EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcE-----EEeeCCCcccCCeEEcCCCCEEEE
Confidence 2211111 1235889999999987665543 24455555 2221 112222345678999999987755
Q ss_pred e-eCCCeEEEEeccC-CC-CCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCC
Q psy14815 243 C-SDDATVKIWKEYK-PG-NSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS 319 (479)
Q Consensus 243 ~-~~dg~i~iwd~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 319 (479)
+ +.++.|.+||+.. .. .. ...+....+... ...+..++++++|.++++...++.|..|+.. ++
T Consensus 196 ~~~~~~~I~~~d~~~~~Gl~~---------~~~~~~~~~~~~-~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-g~--- 261 (326)
T 2ghs_A 196 VDTKVNRLMRVPLDARTGLPT---------GKAEVFIDSTGI-KGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GN--- 261 (326)
T ss_dssp EETTTCEEEEEEBCTTTCCBS---------SCCEEEEECTTS-SSEEEEEEECTTSCEEEEEETTTEEEEECTT-CC---
T ss_pred EECCCCEEEEEEcccccCCcc---------cCceEEEECCCC-CCCCCeeEECCCCCEEEEEeCCCEEEEECCC-CC---
Confidence 4 4568899999751 11 11 001222233222 3456789999999888877777899999984 43
Q ss_pred CceeeEEEeccccccccceeEEEec-CCCCCCCcc
Q psy14815 320 DMVSFDLVHTEHRAHNQDVNCVAWN-PVVPEPQKT 353 (479)
Q Consensus 320 ~~~~~~~~~~~~~~h~~~v~~~~~s-p~~~~l~~~ 353 (479)
.+..+ ..+...+++++|+ |++..|...
T Consensus 262 ------~~~~i-~~~~~~~~~~af~g~d~~~L~vt 289 (326)
T 2ghs_A 262 ------HIARY-EVPGKQTTCPAFIGPDASRLLVT 289 (326)
T ss_dssp ------EEEEE-ECSCSBEEEEEEESTTSCEEEEE
T ss_pred ------EEEEE-ECCCCCcEEEEEecCCCCEEEEE
Confidence 12222 2345578999998 898877433
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=1.1e-10 Score=119.36 Aligned_cols=230 Identities=15% Similarity=0.116 Sum_probs=147.3
Q ss_pred ccCCcEEEEEECCCCCEEEEEE-----CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc-----
Q psy14815 88 GHQRTIRETAWSPCGNFIASAS-----FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS----- 157 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~-----~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~----- 157 (479)
++...+..++|||||++|+.+. ....|++||+.+++.... .+... ....++|+ |++.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~--k~~~~~Ws-Dg~~l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDV--KFSGISWL-GNEGFFYSSYDKPDGSEL 201 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEE--ESCCCEEE-TTTEEEEEESSCCC----
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCc--eeccEEEe-CCCEEEEEEecCcccccc
Confidence 4556788999999999988543 235799999999974322 22211 12567899 9999998887743
Q ss_pred --------EEEEEeCCCCce-eeeeeeec-cccceeEEEEecCCCEEEEEEc----CCcEEEEecCCcccceEeeeeecC
Q psy14815 158 --------VWVWEVGEEDEY-ECAAVINA-HIQDVKKVRFHPFDNILASASY----DDTVKLFKEDKAEADWINFATLKS 223 (479)
Q Consensus 158 --------i~vwd~~~~~~~-~~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~ 223 (479)
|++|++.+.... ..+..... +.....++.|+|+|++|+.... +..|.++|+.++... ...+..
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~---~~~l~~ 278 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAP---LLTVQG 278 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCC---CEEEEC
T ss_pred cccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCc---eEEEeC
Confidence 999998775321 22222333 4445778999999998866543 248999999876432 233444
Q ss_pred CCccEEEEEEccCCCEEEEee-CC---CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEE
Q psy14815 224 HTSTVWSLAFDRIGSRLATCS-DD---ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA 299 (479)
Q Consensus 224 ~~~~v~~~~~~~~~~~l~s~~-~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~ 299 (479)
+....... ++++++.|+..+ .+ +.|..+|+..+.. ..++ .+..+... +. .|++++++|+
T Consensus 279 ~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~----------~~~~---~l~~~~~~-~~--~~s~~g~~lv 341 (693)
T 3iuj_A 279 DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGP----------AHWR---DLIPERQQ-VL--TVHSGSGYLF 341 (693)
T ss_dssp SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCG----------GGCE---EEECCCSS-CE--EEEEETTEEE
T ss_pred CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCc----------cccE---EEecCCCC-EE--EEEEECCEEE
Confidence 55555444 666676665444 33 5788888755422 1222 33343233 33 8889998877
Q ss_pred EEeCCC---eEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCC
Q psy14815 300 TACGDD---AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 300 ~~~~dg---~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 351 (479)
....++ .|++|++..+. ...+.....+.+..+.++|+++.+.
T Consensus 342 ~~~~~~g~~~l~~~d~~g~~----------~~~l~~p~~~~~~~~~~~~d~~~l~ 386 (693)
T 3iuj_A 342 AEYMVDATARVEQFDYEGKR----------VREVALPGLGSVSGFNGKHDDPALY 386 (693)
T ss_dssp EEEEETTEEEEEEECTTSCE----------EEEECCSSSSEEEECCCCTTCSCEE
T ss_pred EEEEECCeeEEEEEECCCCe----------eEEeecCCCceEEeeecCCCCCEEE
Confidence 665543 68899887543 3333223445677888888888773
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.27 E-value=8e-10 Score=101.10 Aligned_cols=225 Identities=7% Similarity=0.014 Sum_probs=143.2
Q ss_pred cCCcEEEEEECCCCC-EEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCC
Q psy14815 89 HQRTIRETAWSPCGN-FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 167 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~ 167 (479)
.........|+|+++ ++++...++.|..|+. +++. ..+..+...+..+.++++|+++++...++.|.+|+.. ++
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~---~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~ 117 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV---DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ 117 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE---EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE---EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CC
Confidence 345667899999998 5666677899999998 4542 2333455678999999999966655556789999875 32
Q ss_pred ceeeee-eeecc-ccceeEEEEecCCCEEEE----EEc-------------CCcEEEEecCCcccceEeeeeecCCCccE
Q psy14815 168 EYECAA-VINAH-IQDVKKVRFHPFDNILAS----ASY-------------DDTVKLFKEDKAEADWINFATLKSHTSTV 228 (479)
Q Consensus 168 ~~~~~~-~~~~~-~~~v~~l~~~~~~~~l~~----~~~-------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v 228 (479)
...+. ..... ...++.++++|+|++.++ |.. .+.|..||..+++.. .+ . .....
T Consensus 118 -~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~--~~---~-~~~~p 190 (305)
T 3dr2_A 118 -AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQ--RM---A-DLDHP 190 (305)
T ss_dssp -EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCE--EE---E-EESSE
T ss_pred -EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEE--EE---e-cCCCC
Confidence 12211 11111 134678999999998886 332 245777777555431 11 1 33456
Q ss_pred EEEEEccCCCEEEEeeCC------CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe
Q psy14815 229 WSLAFDRIGSRLATCSDD------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~ 302 (479)
..++|+|+++.|+.+... +.|.+|++.... . .....+..........++++++|.+.++.
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l------------~~~~~~~~~~~~~pdgi~~d~~G~lwv~~- 256 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-L------------HDRRHFASVPDGLPDGFCVDRGGWLWSSS- 256 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-E------------EEEEEEECCSSSCCCSEEECTTSCEEECC-
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-c------------cCCeEEEECCCCCCCeEEECCCCCEEEec-
Confidence 789999999988777665 689999975331 0 11111111113345678899999855544
Q ss_pred CCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCc
Q psy14815 303 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 303 ~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~ 352 (479)
.+ .|.+|+.+... +..+. .+. .+.+++|+|+++.|..
T Consensus 257 ~~-gv~~~~~~g~~----------~~~~~-~~~-~~~~~~f~~d~~~L~i 293 (305)
T 3dr2_A 257 GT-GVCVFDSDGQL----------LGHIP-TPG-TASNCTFDQAQQRLFI 293 (305)
T ss_dssp SS-EEEEECTTSCE----------EEEEE-CSS-CCCEEEECTTSCEEEE
T ss_pred CC-cEEEECCCCCE----------EEEEE-CCC-ceeEEEEeCCCCEEEE
Confidence 44 59999985332 33222 222 5889999999887643
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.21 E-value=4.5e-09 Score=97.51 Aligned_cols=262 Identities=9% Similarity=0.026 Sum_probs=156.7
Q ss_pred CccceEEEeec-----CCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEE----------CCCeEEEE
Q psy14815 53 PVETSLRQLVE-----DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS----------FDATTAVW 117 (479)
Q Consensus 53 ~~~~~~~~~~~-----~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~----------~dg~i~iw 117 (479)
|+...++.... ++.+.+.|..+.. ... ....+ ..+ . ++++|||++++++. .++.|.+|
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~~--v~~--~I~vG-~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAGR--VIG--MIDGG-FLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTTE--EEE--EEEEC-SSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCCe--EEE--EEECC-CCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 45555555543 5789999887422 111 11112 223 4 99999999888775 35789999
Q ss_pred ECCCCeEEEeEEEeC--C---CCcEEEEEEcCCCCEEEEEeC--CCcEEEEEeCCCCceeeeeeeeccccceeEEEEecC
Q psy14815 118 DKRSGQFECNATLEG--H---ENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 190 (479)
Q Consensus 118 d~~~~~~~~~~~~~~--~---~~~v~~l~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 190 (479)
|..+++......+.. + ......+.|+|||++++++.. ++.|.++|+.+.+ .+..+.... . ...+...
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~---vv~tI~v~g--~-~~~~P~g 188 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA---FKRMLDVPD--C-YHIFPTA 188 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTE---EEEEEECCS--E-EEEEEEE
T ss_pred ECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCc---EEEEEECCC--c-ceeecCC
Confidence 999987433322321 0 124567999999999998874 6899999999984 344432211 1 2233334
Q ss_pred CCEEEEEEcCCcEEEEecCC-cccceEeeeeecCCCccEE-EEEEc-cCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCC
Q psy14815 191 DNILASASYDDTVKLFKEDK-AEADWINFATLKSHTSTVW-SLAFD-RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD 267 (479)
Q Consensus 191 ~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~v~-~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 267 (479)
.+.+++.+.||.+.+.++.. ++........+..-..++. ...|. ++|++++ .+.+|.|.+.|+......
T Consensus 189 ~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~------- 260 (386)
T 3sjl_D 189 PDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAK------- 260 (386)
T ss_dssp TTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCE-------
T ss_pred CceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcce-------
Confidence 56777888889888888875 3321000000111112221 23554 6675555 555899999998543211
Q ss_pred CCCceEEEEEEe---------ccccccEEEEEecCCCCeEEEEeC----------CCeEEEcccCCCCCCCCceeeEEEe
Q psy14815 268 NDSVWKCVCTLS---------GHHGRTIYDISWCHLTDLIATACG----------DDAIRIFKENPEAGDSDMVSFDLVH 328 (479)
Q Consensus 268 ~~~~~~~~~~~~---------~~~~~~i~~l~~~~~~~~l~~~~~----------dg~i~vw~~~~~~~~~~~~~~~~~~ 328 (479)
....+. +-.......++++++++.+..... .+.|.++|+.+++ .+.
T Consensus 261 ------v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k---------v~~ 325 (386)
T 3sjl_D 261 ------FLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE---------RLA 325 (386)
T ss_dssp ------ECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC---------EEE
T ss_pred ------eecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe---------EEE
Confidence 111111 000112334677899888777643 2579999999988 555
Q ss_pred ccccccccceeEEEecCCCC-CCCc
Q psy14815 329 TEHRAHNQDVNCVAWNPVVP-EPQK 352 (479)
Q Consensus 329 ~~~~~h~~~v~~~~~sp~~~-~l~~ 352 (479)
++.-+ ..+++++++||++ +|..
T Consensus 326 ~i~vg--~~~~~lavs~D~~~~ly~ 348 (386)
T 3sjl_D 326 KFEMG--HEIDSINVSQDEKPLLYA 348 (386)
T ss_dssp EEEEE--EEECEEEECSSSSCEEEE
T ss_pred EEECC--CCcceEEECCCCCeEEEE
Confidence 55433 3788999999997 4543
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=99.18 E-value=7.1e-10 Score=103.03 Aligned_cols=238 Identities=8% Similarity=-0.019 Sum_probs=145.8
Q ss_pred EEEECCCCCeEEEee----------CCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 16 NVSWNPQGTMISSCG----------EDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 16 ~l~~s~~~~~l~t~~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
.+.++||+++++++. .+++|.+||..+++.+.++..... ..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~---------------------------~~-- 119 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDA---------------------------PR-- 119 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTS---------------------------CS--
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCc---------------------------cc--
Confidence 799999999988886 368899999998887766521000 00
Q ss_pred ccccCCcEEEEEECCCCCEEEEEEC--CCeEEE--EECCCCeEEEeEEEeCCCCcEEEEEEcCCC-CEEEEEeCCCcEEE
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASF--DATTAV--WDKRSGQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWV 160 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~--dg~i~i--wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~v 160 (479)
.........++++|||++++++.. +..+.+ +|..+ ...+..- +. ....|++ ..+++.+.||.+.+
T Consensus 120 -~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t-----v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~ 189 (368)
T 1mda_H 120 -FSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD-----DQLTKSA-SC---FHIHPGAAATHYLGSCPASLAA 189 (368)
T ss_dssp -CCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE-----EEEEECS-SC---CCCEEEETTEEECCCCTTSCEE
T ss_pred -cccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh-----ceEEECC-Cc---eEEccCCCeEEEEEcCCCCEEE
Confidence 000123456889999999999875 467888 88876 1222211 11 1123433 34556677888888
Q ss_pred EEeCC----CCceeee--eeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC-------C---
Q psy14815 161 WEVGE----EDEYECA--AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS-------H--- 224 (479)
Q Consensus 161 wd~~~----~~~~~~~--~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-------~--- 224 (479)
.|+.. ....... ..+.....+. . .+++..++..+. +.|.+.|....... .+..+.. +
T Consensus 190 vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~--v~~~~~~~~~~~~~~~~~ 262 (368)
T 1mda_H 190 SDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGAT--MKAAIDGNESGRKADNFR 262 (368)
T ss_dssp EECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCE--EECCCCSSCTHHHHTTEE
T ss_pred EECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcce--EEEEEEeccccccccccc
Confidence 88876 2111100 0111122333 3 666666666666 99999998653321 1111110 0
Q ss_pred CccEEEEEEccCCCEEEEeeC---------CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCC
Q psy14815 225 TSTVWSLAFDRIGSRLATCSD---------DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 295 (479)
Q Consensus 225 ~~~v~~~~~~~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~ 295 (479)
......++++|+++.++.+.. ++.+.++|+... +.+.++.. +.....++|+||+
T Consensus 263 p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~---------------~vv~~i~v--g~~p~gi~~s~Dg 325 (368)
T 1mda_H 263 SAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG---------------QTSGPISN--GHDSDAIIAAQDG 325 (368)
T ss_dssp ECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC---------------CEEECCEE--EEEECEEEECCSS
T ss_pred cCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCC---------------eEEEEEEC--CCCcceEEECCCC
Confidence 111112689999998886543 235669998544 44555544 2368899999999
Q ss_pred Ce-EEEEe-CCCeEEEcccCCCC
Q psy14815 296 DL-IATAC-GDDAIRIFKENPEA 316 (479)
Q Consensus 296 ~~-l~~~~-~dg~i~vw~~~~~~ 316 (479)
++ +++.. .++.|.++|+.+.+
T Consensus 326 ~~l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 326 ASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp SCEEEEEETTTTEEEEEESSSCE
T ss_pred CEEEEEccCCCCeEEEEECCCCc
Confidence 84 55555 58999999999987
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.2e-08 Score=95.43 Aligned_cols=191 Identities=9% Similarity=0.020 Sum_probs=125.7
Q ss_pred cEEEEEECCCCCEEEEEECC------CeEEEEECCCCeEEEeEEEeC--CC-CcEEEEEEcCCCCEEEEEe---------
Q psy14815 92 TIRETAWSPCGNFIASASFD------ATTAVWDKRSGQFECNATLEG--HE-NEVKSVTWSKNGQFLATCS--------- 153 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~d------g~i~iwd~~~~~~~~~~~~~~--~~-~~v~~l~~~~~~~~l~~~~--------- 153 (479)
....+..+|+| .++++..+ |.|.+.|.++.+ .+..... .. ..-+.+.|+|+++.+++..
T Consensus 139 ~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~--v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~ 215 (462)
T 2ece_A 139 RLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFE--PLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIED 215 (462)
T ss_dssp EEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCC--EEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTT
T ss_pred cccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCe--EEEEEccCCCCccccceEEECCCCCEEEEccCcCcccccc
Confidence 44567788999 77766555 789999999887 3444432 21 2244688899999888885
Q ss_pred ----------CCCcEEEEEeCCCCceeeeeeeec--cccceeEEEE--ecCCCEEEEEEc------CCcEEEEecCCccc
Q psy14815 154 ----------RDKSVWVWEVGEEDEYECAAVINA--HIQDVKKVRF--HPFDNILASASY------DDTVKLFKEDKAEA 213 (479)
Q Consensus 154 ----------~dg~i~vwd~~~~~~~~~~~~~~~--~~~~v~~l~~--~~~~~~l~~~~~------dg~i~i~d~~~~~~ 213 (479)
.+.+|.+||+.+. +....+.. .......+.| +|+++++.++++ +++|.+|..+.+.
T Consensus 216 g~~~~~~~~~~~d~V~v~D~~~~---k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~- 291 (462)
T 2ece_A 216 GLKLEHLKDRYGNRIHFWDLRKR---KRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK- 291 (462)
T ss_dssp CCCTTTHHHHSCCEEEEEETTTT---EEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE-
T ss_pred ccchhhhhhccCCEEEEEECCCC---cEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc-
Confidence 3689999999986 33333432 1233455656 999998888775 5688877665432
Q ss_pred ceEeeeee--cCC----------------CccEEEEEEccCCCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEE
Q psy14815 214 DWINFATL--KSH----------------TSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKC 274 (479)
Q Consensus 214 ~~~~~~~~--~~~----------------~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 274 (479)
+.....+ ... ......+.+++||++|+++. ..+.|.+||+..... .+.
T Consensus 292 -~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~------------~~l 358 (462)
T 2ece_A 292 -WNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFK------------PVL 358 (462)
T ss_dssp -EEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTS------------CEE
T ss_pred -eeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCC------------cEE
Confidence 2222211 110 23467899999999997766 468999999864322 133
Q ss_pred EEEEeccc-------------cccEEEEEecCCCCeEEEEe
Q psy14815 275 VCTLSGHH-------------GRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 275 ~~~~~~~~-------------~~~i~~l~~~~~~~~l~~~~ 302 (479)
+..+.... ...-..++++|||++|+++.
T Consensus 359 v~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 359 TGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 44433210 01357899999999999887
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.15 E-value=8.7e-09 Score=104.79 Aligned_cols=296 Identities=7% Similarity=-0.011 Sum_probs=172.7
Q ss_pred CCeEEEeeCCCcEEEEecccccccccccCCC-------------------ccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 23 GTMISSCGEDKNIRLWVMVIREPYEKLHGLP-------------------VETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 23 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+..++.++.++.|.-+|..+|+.+-++.... .+..++....++.+..+|.++....+....
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~ 149 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDT 149 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEeeeecC
Confidence 5567777788999999999988876654321 134566667789999999886555554432
Q ss_pred EeccccCCcEEEEEECC--CCCEEEEEE------CCCeEEEEECCCCeEEEeEEEeCC--C-------------------
Q psy14815 84 ILSDGHQRTIRETAWSP--CGNFIASAS------FDATTAVWDKRSGQFECNATLEGH--E------------------- 134 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~--~~~~l~t~~------~dg~i~iwd~~~~~~~~~~~~~~~--~------------------- 134 (479)
.. +......+..+| .+..++.++ .+|.|..||.++|+. +..+... .
T Consensus 150 ~~---~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~--~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 224 (689)
T 1yiq_A 150 RA---DHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKE--AWRFYTVPGDPKLPPEGKGMEIAAKTWFG 224 (689)
T ss_dssp CS---CTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCE--EEEEESSCCCTTSCCCSHHHHHHHTTCCS
T ss_pred cC---CCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcE--EEEecccCCCcccccccccccccccccCC
Confidence 10 111111111122 123444443 368999999999973 3333210 0
Q ss_pred ----------CcEEEEEEcCCCCEEEEEeCCCc-------------------EEEEEeCCCCceeeeeeeeccc------
Q psy14815 135 ----------NEVKSVTWSKNGQFLATCSRDKS-------------------VWVWEVGEEDEYECAAVINAHI------ 179 (479)
Q Consensus 135 ----------~~v~~l~~~~~~~~l~~~~~dg~-------------------i~vwd~~~~~~~~~~~~~~~~~------ 179 (479)
..-..++++|+...++.++.++. |..+|.++++..-..+ ...|.
T Consensus 225 ~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~-~~~~d~wd~~~ 303 (689)
T 1yiq_A 225 DAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQ-TTPGDAWDYTA 303 (689)
T ss_dssp STHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEE-SSTTCCSCCCC
T ss_pred ceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeee-cCCcccccccC
Confidence 01125788888889999988764 9999999885322221 11121
Q ss_pred -cceeEEEEecCCC---EEEEEEcCCcEEEEecCCcccceEeeee------------------------ecCCCc-----
Q psy14815 180 -QDVKKVRFHPFDN---ILASASYDDTVKLFKEDKAEADWINFAT------------------------LKSHTS----- 226 (479)
Q Consensus 180 -~~v~~l~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~------------------------~~~~~~----- 226 (479)
.+........+|+ .++.++.+|.++++|.++++..+..... ......
T Consensus 304 ~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p 383 (689)
T 1yiq_A 304 TQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTP 383 (689)
T ss_dssp CSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESS
T ss_pred CCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCC
Confidence 1122222223554 7889999999999999988753211000 000000
Q ss_pred ------cEEEEEEccCCCEEEEeeCC---------------------------------------------CeEEEEecc
Q psy14815 227 ------TVWSLAFDRIGSRLATCSDD---------------------------------------------ATVKIWKEY 255 (479)
Q Consensus 227 ------~v~~~~~~~~~~~l~s~~~d---------------------------------------------g~i~iwd~~ 255 (479)
.-..++|+|+...+++.+.+ |.|+.||+.
T Consensus 384 ~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~ 463 (689)
T 1yiq_A 384 AFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPV 463 (689)
T ss_dssp CTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETT
T ss_pred CcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECC
Confidence 01136888888888876544 344444442
Q ss_pred CCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccc
Q psy14815 256 KPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHN 335 (479)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~ 335 (479)
++ +.+-++..+ .+...-.+...+.++++++.||.++.||.++++ ++.+...++.
T Consensus 464 tG---------------~~~W~~~~~--~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~---------~lw~~~~~~~ 517 (689)
T 1yiq_A 464 KQ---------------QAAWEVPYV--TIFNGGTLSTAGNLVFEGSADGRVIAYAADTGE---------KLWEQPAASG 517 (689)
T ss_dssp TT---------------EEEEEEEES--SSCCCCEEEETTTEEEEECTTSEEEEEETTTCC---------EEEEEECSSC
T ss_pred CC---------------CeEeEccCC--CCccCccceECCCEEEEECCCCcEEEEECCCCc---------cceeeeCCCC
Confidence 22 223233222 222333455567789999999999999999998 4444433333
Q ss_pred cceeEEEecCCCCCC
Q psy14815 336 QDVNCVAWNPVVPEP 350 (479)
Q Consensus 336 ~~v~~~~~sp~~~~l 350 (479)
....-+.|+.+|+..
T Consensus 518 ~~~~p~ty~~~G~qy 532 (689)
T 1yiq_A 518 VMAAPVTYSVDGEQY 532 (689)
T ss_dssp CCSCCEEEEETTEEE
T ss_pred cccCceEEEECCEEE
Confidence 333457778888743
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=99.14 E-value=4.5e-09 Score=106.67 Aligned_cols=296 Identities=5% Similarity=-0.044 Sum_probs=175.5
Q ss_pred CCeEEEeeCCCcEEEEecccccccccccCCC-------------------ccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 23 GTMISSCGEDKNIRLWVMVIREPYEKLHGLP-------------------VETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 23 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+..++.++.++.|.-+|..+|+.+-++.... .+..++....++.+..+|..+....+....
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~ 156 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQNT 156 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEET
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCEEeeecC
Confidence 4466777778899999999888776554321 234566667788899999886554444321
Q ss_pred EeccccCCcEEEEEECC--CCCEEEEEEC------CCeEEEEECCCCeEEEeEEEeCCCC--------------------
Q psy14815 84 ILSDGHQRTIRETAWSP--CGNFIASASF------DATTAVWDKRSGQFECNATLEGHEN-------------------- 135 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~--~~~~l~t~~~------dg~i~iwd~~~~~~~~~~~~~~~~~-------------------- 135 (479)
.........+. -+| .+..++.++. ++.|+.+|..+|+. +..+.....
T Consensus 157 ~~~~~~~~~~~---~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~--~W~~~~~~~~~~~~~~~~~~~~g~~~w~~ 231 (677)
T 1kb0_A 157 FEGQKGSLTIT---GAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGER--KWRWFSVPGDPSKPFEDESMKRAARTWDP 231 (677)
T ss_dssp TTTCCSSCBCC---SCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCE--EEEEESSCCCTTSCCSSHHHHHHHTTSCG
T ss_pred CcCcCcCcccc---cCcEEECCEEEEEecccccCCCCEEEEEECCCCcE--EEEeccCCCCccccccccccccccccccc
Confidence 10000001111 111 2345555543 68999999999974 333332111
Q ss_pred ------------cEEEEEEcCCCCEEEEEeCCC-------------------cEEEEEeCCCCceeeeeeeeccc-----
Q psy14815 136 ------------EVKSVTWSKNGQFLATCSRDK-------------------SVWVWEVGEEDEYECAAVINAHI----- 179 (479)
Q Consensus 136 ------------~v~~l~~~~~~~~l~~~~~dg-------------------~i~vwd~~~~~~~~~~~~~~~~~----- 179 (479)
....+++++++..++.++.++ .|..+|.++++..-..+ ...|.
T Consensus 232 ~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~-~~~~d~wd~~ 310 (677)
T 1kb0_A 232 SGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQ-ETPGDNWDYT 310 (677)
T ss_dssp GGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEE-SSTTCCSCCC
T ss_pred cCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEe-cCCCcccccc
Confidence 113578888888899887764 49999999885322222 11221
Q ss_pred --cceeEEEEecCC---CEEEEEEcCCcEEEEecCCcccceEeeee-------ecCCCccE-------------------
Q psy14815 180 --QDVKKVRFHPFD---NILASASYDDTVKLFKEDKAEADWINFAT-------LKSHTSTV------------------- 228 (479)
Q Consensus 180 --~~v~~l~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~~~~~v------------------- 228 (479)
.....+....+| +.++.++.+|.++++|..+++..+..... +.....++
T Consensus 311 ~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~ 390 (677)
T 1kb0_A 311 STQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPY 390 (677)
T ss_dssp CCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTT
T ss_pred cCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcc
Confidence 112223333467 68999999999999999988753322100 00000011
Q ss_pred -----EEEEEccCCCEEEEeeCC-------------------------------------------CeEEEEeccCCCCC
Q psy14815 229 -----WSLAFDRIGSRLATCSDD-------------------------------------------ATVKIWKEYKPGNS 260 (479)
Q Consensus 229 -----~~~~~~~~~~~l~s~~~d-------------------------------------------g~i~iwd~~~~~~~ 260 (479)
..++++|++..+++...+ |.|..||+.++
T Consensus 391 G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG--- 467 (677)
T 1kb0_A 391 GAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQ--- 467 (677)
T ss_dssp CSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTT---
T ss_pred cccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCC---
Confidence 156889988888876543 44555555322
Q ss_pred CCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeE
Q psy14815 261 AGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNC 340 (479)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 340 (479)
+.+-++.. ..++....+...+.+++.++.||.+++||..+++ ++..+..++.....-
T Consensus 468 ------------~~~W~~~~--~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~---------~lw~~~~~~~~~~~p 524 (677)
T 1kb0_A 468 ------------KAAWSVEH--VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGE---------KLWEAPTGTGVVAAP 524 (677)
T ss_dssp ------------EEEEEEEE--SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCC---------EEEEEECSSCCCSCC
T ss_pred ------------cEEeecCC--CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCc---------eeeeeeCCCCcccCC
Confidence 22222221 2234444556677888889999999999999998 454443344334455
Q ss_pred EEecCCCCCC
Q psy14815 341 VAWNPVVPEP 350 (479)
Q Consensus 341 ~~~sp~~~~l 350 (479)
+.|+++|+..
T Consensus 525 ~~y~~~G~~~ 534 (677)
T 1kb0_A 525 STYMVDGRQY 534 (677)
T ss_dssp EEEEETTEEE
T ss_pred EEEEeCCEEE
Confidence 6777888644
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.13 E-value=1.5e-08 Score=94.26 Aligned_cols=240 Identities=11% Similarity=0.001 Sum_probs=143.9
Q ss_pred CcEEEEEECCCCCEEEEEEC--CCeEEEEECCCCeEEEeE----EEeCCCCcEEEEEEcCCCCEEEEEeC-----CCcEE
Q psy14815 91 RTIRETAWSPCGNFIASASF--DATTAVWDKRSGQFECNA----TLEGHENEVKSVTWSKNGQFLATCSR-----DKSVW 159 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~--dg~i~iwd~~~~~~~~~~----~~~~~~~~v~~l~~~~~~~~l~~~~~-----dg~i~ 159 (479)
..+..++++++|+.+++... ++.++||.+.+++..... ....+-..+..++++++++++++-.. ++.|.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 68899999999999888642 342555554455422110 01124467999999999875555433 57899
Q ss_pred EEEeCCCCceeeeeeee------ccccceeEEEEecCC-CEEEEEE---cCCcEEEEecCCcccceEeeeeecCC-----
Q psy14815 160 VWEVGEEDEYECAAVIN------AHIQDVKKVRFHPFD-NILASAS---YDDTVKLFKEDKAEADWINFATLKSH----- 224 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~------~~~~~v~~l~~~~~~-~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~----- 224 (479)
+||+.+++. ...+. .+...+..+++++++ ..+++.. .++.|.+||..+++. ...+..|
T Consensus 97 ~~d~~tg~~---~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~----~r~~~~~~~~~~ 169 (343)
T 2qe8_A 97 AWDTLNNQL---SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLA----ARVLQGYPGIAP 169 (343)
T ss_dssp EEETTTTEE---EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCE----EEECTTCTTTSC
T ss_pred EEECCCCeE---EEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCE----EEEecCCCcccc
Confidence 999987632 22222 122346899999865 4445544 678999999876542 1111111
Q ss_pred ------------------------CccEEEEEEccCCCEEEEeeCCC-eEEEEeccCCCCCCCCCCCCCCCceEEEEEEe
Q psy14815 225 ------------------------TSTVWSLAFDRIGSRLATCSDDA-TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS 279 (479)
Q Consensus 225 ------------------------~~~v~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (479)
...+..++|+|+++.|+.+..++ .+..++........ +. .......+. ..
T Consensus 170 ~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~-~~---~~~~~~~~~-~~ 244 (343)
T 2qe8_A 170 EDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQ-LT---DAELGSKIE-RY 244 (343)
T ss_dssp CSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTT-CC---HHHHHTTCE-EE
T ss_pred cccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCC-CC---hhhhhcceE-ec
Confidence 12368899999999998887766 44444432111000 00 000000000 11
Q ss_pred ccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCc
Q psy14815 280 GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 280 ~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~ 352 (479)
++ ......++++++|.++++...++.|.+||...++ +..+.. ..+...+.+++|.|++..+..
T Consensus 245 g~-~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~-------~~~~~~--~~~~~~p~~va~~~~g~l~v~ 307 (343)
T 2qe8_A 245 SE-KPICDGISIDKDHNIYVGDLAHSAIGVITSADRA-------YKLLVT--DEKLSWTDSFNFGSDGYLYFD 307 (343)
T ss_dssp EE-CCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE-------EEEEEE--CGGGSCEEEEEECTTSCEEEE
T ss_pred cc-CCCCceEEECCCCCEEEEccCCCeEEEEECCCCC-------EEEEEE--CCceecCCeeEECCCCcEEEE
Confidence 11 2245678999999999998889999999984443 111211 123456889999999875533
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.09 E-value=6e-11 Score=111.55 Aligned_cols=182 Identities=14% Similarity=0.068 Sum_probs=98.7
Q ss_pred CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccc-
Q psy14815 101 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI- 179 (479)
Q Consensus 101 ~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~- 179 (479)
++..+++++.||.|..||..+|+ .+..+.. +.+.+..+..++..+++++.||.|+.||..+++.... ...+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~--~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~---~~~~~~ 80 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGS--IKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTK---LPFTIP 80 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCC--EEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEE---CSCCHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCC--EEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeee---eeccCc
Confidence 57789999999999999999997 3445544 4455555556777888888999999999987643211 11111
Q ss_pred ccee-EEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCC
Q psy14815 180 QDVK-KVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 258 (479)
Q Consensus 180 ~~v~-~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 258 (479)
..+. +..+. .+..+++++.++.++.||..+++..| .+..+. ...++|++..+++++.|+.|+.||...+.
T Consensus 81 ~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w----~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 81 ELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQ----TLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRE 151 (369)
T ss_dssp HHHTTCSCC------CCCCEEEEEEEEECCC------------------------------EEEEEEEEEEECCCSSSSS
T ss_pred cccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEE----EecCCC----cccccccCCEEEEEecCCEEEEEECCCCC
Confidence 1110 11111 34567888899999999999887633 222222 23456788899999999999999987654
Q ss_pred CCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCC---CeEEEEeCCCeEEEcccCCCC
Q psy14815 259 NSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT---DLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~---~~l~~~~~dg~i~vw~~~~~~ 316 (479)
.. |... ... .....+..+. ..+++++.||.++.||..+++
T Consensus 152 ~~-----------W~~~--~~~-----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 152 LR-----------WNAT--YFD-----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGD 194 (369)
T ss_dssp CC-----------CEEE--EEE-----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCC
T ss_pred EE-----------EeEe--ccc-----ccCccccCCccccceEEEECCCCEEEEEECCCCc
Confidence 32 2211 111 1122333332 467778899999999999887
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=99.07 E-value=1.8e-08 Score=102.27 Aligned_cols=258 Identities=8% Similarity=0.045 Sum_probs=160.1
Q ss_pred CCCeEEEeeCCCcEEEEecccccccccccCC-C-------------ccceEEEeec------CCcEEEecCCCCCCceee
Q psy14815 22 QGTMISSCGEDKNIRLWVMVIREPYEKLHGL-P-------------VETSLRQLVE------DKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 22 ~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~-~-------------~~~~~~~~~~------~~~i~~w~~~~~~~~~~~ 81 (479)
++..++.++.|+.|..+|..+|+.+.++... . .+..++.... ++.+..+|..+....+..
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 3567888888999999999999887665432 1 1233444332 578999998865544443
Q ss_pred eEEecc---------------------------ccCCcEEEEEECCCCCEEEEEECCC-------------------eEE
Q psy14815 82 KAILSD---------------------------GHQRTIRETAWSPCGNFIASASFDA-------------------TTA 115 (479)
Q Consensus 82 ~~~~~~---------------------------~~~~~v~~v~~~~~~~~l~t~~~dg-------------------~i~ 115 (479)
...... +.......++++|++..++.+..++ .|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~ 286 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV 286 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence 321100 1111223578888888988887664 599
Q ss_pred EEECCCCeEEEeEEEeCCC-------CcEEEEEEcCCC---CEEEEEeCCCcEEEEEeCCCCceeeeeeee--------c
Q psy14815 116 VWDKRSGQFECNATLEGHE-------NEVKSVTWSKNG---QFLATCSRDKSVWVWEVGEEDEYECAAVIN--------A 177 (479)
Q Consensus 116 iwd~~~~~~~~~~~~~~~~-------~~v~~l~~~~~~---~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~--------~ 177 (479)
.+|..+|+..-......|. .....+....+| ..++.++.+|.+.++|.++++.......-. .
T Consensus 287 AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~ 366 (677)
T 1kb0_A 287 ALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDK 366 (677)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECT
T ss_pred EEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCC
Confidence 9999999844333333231 122223333467 679999999999999999885432211000 0
Q ss_pred cccce------------------------eEEEEecCCCEEEEEEcC---------------------------------
Q psy14815 178 HIQDV------------------------KKVRFHPFDNILASASYD--------------------------------- 200 (479)
Q Consensus 178 ~~~~v------------------------~~l~~~~~~~~l~~~~~d--------------------------------- 200 (479)
...++ ..++|+|++.++++...+
T Consensus 367 ~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~ 446 (677)
T 1kb0_A 367 HGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFF 446 (677)
T ss_dssp TSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEE
T ss_pred CCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccccc
Confidence 00011 257889988888776432
Q ss_pred ----------CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCC
Q psy14815 201 ----------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDS 270 (479)
Q Consensus 201 ----------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 270 (479)
|.|..||+.+++..|... +..++....+...+..++.++.||.+++||..++
T Consensus 447 ~~~~~~~~~~g~l~A~D~~tG~~~W~~~-----~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG------------- 508 (677)
T 1kb0_A 447 NAEPPKSKPFGRLLAWDPVAQKAAWSVE-----HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATG------------- 508 (677)
T ss_dssp CSSCCCSCCEEEEEEEETTTTEEEEEEE-----ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTC-------------
T ss_pred ccccCCCCCccEEEEEeCCCCcEEeecC-----CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCC-------------
Confidence 779999999887654432 2223334456667888999999999999998544
Q ss_pred ceEEEEEEeccccccEEEEEecCCCCeEE
Q psy14815 271 VWKCVCTLSGHHGRTIYDISWCHLTDLIA 299 (479)
Q Consensus 271 ~~~~~~~~~~~~~~~i~~l~~~~~~~~l~ 299 (479)
+.+.++.........-+.|..+|+.++
T Consensus 509 --~~lw~~~~~~~~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 509 --EKLWEAPTGTGVVAAPSTYMVDGRQYV 535 (677)
T ss_dssp --CEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred --ceeeeeeCCCCcccCCEEEEeCCEEEE
Confidence 445555543233333455667776433
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=99.06 E-value=8.3e-07 Score=79.12 Aligned_cols=222 Identities=9% Similarity=0.065 Sum_probs=136.5
Q ss_pred CcEEEEEECCCCCEEEEEE-CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEEeCCCCc
Q psy14815 91 RTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDE 168 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vwd~~~~~~ 168 (479)
..+..++|++++..|+.+. .++.|..+++.++.. .............+++++++..++.+. ..+.|.++++.....
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP--TTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR 113 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC--EEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc--EEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE
Confidence 4578999999766665554 568999999987642 222332335678999999766666554 467899999875421
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEEEc---CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee-
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASASY---DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS- 244 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~- 244 (479)
..+ ..........++++|++..|..+.. .+.|..+++..... ..+ ..........++++++++.|+.+.
T Consensus 114 -~~~--~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~--~~~--~~~~~~~P~gia~d~~~~~lyv~d~ 186 (267)
T 1npe_A 114 -RVL--FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR--RIL--AQDNLGLPNGLTFDAFSSQLCWVDA 186 (267)
T ss_dssp -EEE--ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC--EEE--ECTTCSCEEEEEEETTTTEEEEEET
T ss_pred -EEE--EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc--EEE--EECCCCCCcEEEEcCCCCEEEEEEC
Confidence 111 1111235688999996655555543 36888888764332 111 112234578999999877765544
Q ss_pred CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceee
Q psy14815 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSF 324 (479)
Q Consensus 245 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~ 324 (479)
..+.|.++|.... .....+.+ ......++.. .+.++++...++.|..+|..+++
T Consensus 187 ~~~~I~~~~~~g~---------------~~~~~~~~--~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~-------- 240 (267)
T 1npe_A 187 GTHRAECLNPAQP---------------GRRKVLEG--LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISK-------- 240 (267)
T ss_dssp TTTEEEEEETTEE---------------EEEEEEEC--CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTE--------
T ss_pred CCCEEEEEecCCC---------------ceEEEecC--CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCC--------
Confidence 5678999987321 11112222 2234566654 34444444456899999998876
Q ss_pred EEEeccccccccceeEEEecCCCC
Q psy14815 325 DLVHTEHRAHNQDVNCVAWNPVVP 348 (479)
Q Consensus 325 ~~~~~~~~~h~~~v~~~~~sp~~~ 348 (479)
.+..+..+.......+++.|++.
T Consensus 241 -~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 241 -EMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp -EEEEECCSSCCCCCCEEEECSCC
T ss_pred -ceEEEccccccccceeeecCccC
Confidence 34444333323477889998864
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.04 E-value=3.6e-08 Score=92.16 Aligned_cols=228 Identities=9% Similarity=0.029 Sum_probs=144.5
Q ss_pred CCCCEEEEEE-CCCeEEEEECCCC--eEEEeEEEe-------CCCCcEEEEEEcCCCCEEEEEeCC------CcEEEEEe
Q psy14815 100 PCGNFIASAS-FDATTAVWDKRSG--QFECNATLE-------GHENEVKSVTWSKNGQFLATCSRD------KSVWVWEV 163 (479)
Q Consensus 100 ~~~~~l~t~~-~dg~i~iwd~~~~--~~~~~~~~~-------~~~~~v~~l~~~~~~~~l~~~~~d------g~i~vwd~ 163 (479)
+++++|+..+ .+++|.++|+.+. +......++ .-......+..+|+| .++++..+ |.+.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 7777776654 4689999999754 333444442 111245567888999 76666655 78999999
Q ss_pred CCCCceeeeeeeecc--c-cceeEEEEecCCCEEEEEE-------------------cCCcEEEEecCCcccceEeeeee
Q psy14815 164 GEEDEYECAAVINAH--I-QDVKKVRFHPFDNILASAS-------------------YDDTVKLFKEDKAEADWINFATL 221 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~--~-~~v~~l~~~~~~~~l~~~~-------------------~dg~i~i~d~~~~~~~~~~~~~~ 221 (479)
.+.+ .+..+... . .--..+.|+|+++.+++.. .+.+|.+||+.+++. +.++
T Consensus 172 ~T~~---v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~----~~tI 244 (462)
T 2ece_A 172 YSFE---PLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR----IHSL 244 (462)
T ss_dssp TTCC---EEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE----EEEE
T ss_pred CCCe---EEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcE----eeEE
Confidence 9874 33333321 1 1234578899999888885 368899999987542 3334
Q ss_pred cC--CCccEEEEEE--ccCCCEEEEee------CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccc---------
Q psy14815 222 KS--HTSTVWSLAF--DRIGSRLATCS------DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH--------- 282 (479)
Q Consensus 222 ~~--~~~~v~~~~~--~~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 282 (479)
.. .......+.| +|++++++.++ .+++|.+|....+ .+.....+.-..
T Consensus 245 ~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g-------------~~~~~~vIdi~~~~v~~~lp~ 311 (462)
T 2ece_A 245 TLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDG-------------KWNAEKVIEIPAEPLEGNLPE 311 (462)
T ss_dssp ESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETT-------------EEEEEEEEEECCEECCSSCCG
T ss_pred ecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCC-------------ceeEEEEEeCCCccccccccc
Confidence 32 1233445656 99999987776 4668888776421 122222221000
Q ss_pred --------cccEEEEEecCCCCeEEEEeC-CCeEEEcccCCCCCCCCceeeEEEeccccc-------c------ccceeE
Q psy14815 283 --------GRTIYDISWCHLTDLIATACG-DDAIRIFKENPEAGDSDMVSFDLVHTEHRA-------H------NQDVNC 340 (479)
Q Consensus 283 --------~~~i~~l~~~~~~~~l~~~~~-dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~-------h------~~~v~~ 340 (479)
......+.+++||++|.++.. .+.|.+||+..... ..++..+..+ | .+....
T Consensus 312 ~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~------~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~ 385 (462)
T 2ece_A 312 ILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFK------PVLTGKVKLGGIFHRADHPAGHKLTGAPQM 385 (462)
T ss_dssp GGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTS------CEEEEEEECBTTTTCBCCTTSCCCCSCCCC
T ss_pred cccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCC------cEEEEEEEeCCeeccccccccccCCCCCCE
Confidence 235788999999998887766 68999999863321 1123333222 1 113688
Q ss_pred EEecCCCCCCCccc
Q psy14815 341 VAWNPVVPEPQKTN 354 (479)
Q Consensus 341 ~~~sp~~~~l~~~~ 354 (479)
+++||||++|..+.
T Consensus 386 ~~lSpDGk~LyVaN 399 (462)
T 2ece_A 386 LEISRDGRRVYVTN 399 (462)
T ss_dssp EEECTTSSEEEEEC
T ss_pred EEEcCCCCEEEEEc
Confidence 99999999987665
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.8e-10 Score=108.27 Aligned_cols=181 Identities=9% Similarity=-0.005 Sum_probs=97.8
Q ss_pred CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCC
Q psy14815 22 QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC 101 (479)
Q Consensus 22 ~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~ 101 (479)
++..+++++.||.|..||..+|+.+.++.. ..+.+..+..+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~---------------------------------------~~~~s~p~~~~ 48 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE---------------------------------------DPVLQVPTHVE 48 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC---------------------------------------CCSCCCC----
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC---------------------------------------CCceecceEcC
Confidence 577899999999999999988887544311 12222233456
Q ss_pred CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCC-cEE-EEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccc
Q psy14815 102 GNFIASASFDATTAVWDKRSGQFECNATLEGHEN-EVK-SVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI 179 (479)
Q Consensus 102 ~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~v~-~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 179 (479)
+..+++++.||.|+.||.++++. +.....+.. .+. +..+. ++..+++++.++.++.||.++++. ...+..+.
T Consensus 49 g~~~v~~s~dg~l~a~d~~tG~~--~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~---~w~~~~~~ 122 (369)
T 2hz6_A 49 EPAFLPDPNDGSLYTLGSKNNEG--LTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEK---QQTLSSAF 122 (369)
T ss_dssp -CCEEECTTTCCEEEC-----CC--SEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC---------------
T ss_pred CCEEEEeCCCCEEEEEECCCCce--eeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcE---EEEecCCC
Confidence 77788888999999999988862 233332211 010 00111 345688888999999999998743 33333222
Q ss_pred cceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC---CEEEEeeCCCeEEEEeccC
Q psy14815 180 QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG---SRLATCSDDATVKIWKEYK 256 (479)
Q Consensus 180 ~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~s~~~dg~i~iwd~~~ 256 (479)
...++|++..+++++.++.|+.||.++++..|..... . .....++.+. ..+++++.||.|+.||...
T Consensus 123 ----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~--~----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~t 192 (369)
T 2hz6_A 123 ----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF--D----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSES 192 (369)
T ss_dssp --------------EEEEEEEEEEECCCSSSSSCCCEEEEE--E----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTT
T ss_pred ----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecc--c----ccCccccCCccccceEEEECCCCEEEEEECCC
Confidence 2345678889999999999999999988765443211 1 1122333322 5677888999999999854
Q ss_pred C
Q psy14815 257 P 257 (479)
Q Consensus 257 ~ 257 (479)
+
T Consensus 193 G 193 (369)
T 2hz6_A 193 G 193 (369)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=98.98 E-value=8.9e-08 Score=90.46 Aligned_cols=111 Identities=12% Similarity=0.088 Sum_probs=69.8
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeee----------ccccceeEEEEecCCCEEEEEEc----------C
Q psy14815 141 TWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVIN----------AHIQDVKKVRFHPFDNILASASY----------D 200 (479)
Q Consensus 141 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~----------~~~~~v~~l~~~~~~~~l~~~~~----------d 200 (479)
.|.+++..++..+..+.+.+.|+..... .....+. ........++++|+++.+++... +
T Consensus 271 ~~~~dg~~~~~~s~~g~V~ViD~~~~~~-~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s 349 (426)
T 3c75_H 271 AFSLRSGRLVWPTYTGKIFQADLTAEGA-TFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAAS 349 (426)
T ss_dssp EECTTTCEEEEEBTTSEEEEEEECSSCE-EECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCE
T ss_pred eecCCCCEEEEEeCCCcEEEEeccCCce-EEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCC
Confidence 4455666555555666777777754321 1111110 01112223789999887777643 3
Q ss_pred CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCC-EEEEee-CCCeEEEEeccCC
Q psy14815 201 DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLATCS-DDATVKIWKEYKP 257 (479)
Q Consensus 201 g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~-~dg~i~iwd~~~~ 257 (479)
+.|.++|..+.+. +..+.. ......+.|+|+++ ++++.. .++.|.++|+...
T Consensus 350 ~~VsVID~~T~kv----v~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~ 403 (426)
T 3c75_H 350 RFVVVLNAETGER----INKIEL-GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATG 403 (426)
T ss_dssp EEEEEEETTTCCE----EEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTC
T ss_pred CEEEEEECCCCeE----EEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCC
Confidence 4799999997764 444432 22478899999999 888887 5899999998443
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=98.95 E-value=1.4e-08 Score=94.28 Aligned_cols=217 Identities=9% Similarity=-0.053 Sum_probs=131.0
Q ss_pred EEEECCCCCEEEEEE----------CCCeEEEEECCCCeEEEeEEEeCC-------CCcEEEEEEcCCCCEEEEEeC--C
Q psy14815 95 ETAWSPCGNFIASAS----------FDATTAVWDKRSGQFECNATLEGH-------ENEVKSVTWSKNGQFLATCSR--D 155 (479)
Q Consensus 95 ~v~~~~~~~~l~t~~----------~dg~i~iwd~~~~~~~~~~~~~~~-------~~~v~~l~~~~~~~~l~~~~~--d 155 (479)
.+.++||+++++++. .++.|.+||..+++. +..+... ......+.++|||++++++.. +
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v--v~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~ 146 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP--IADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSS 146 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE--EEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSS
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE--EEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCC
Confidence 699999999998886 368999999999974 4444322 123568999999999999875 3
Q ss_pred CcEEE--EEeCCCCceeeeeeeeccccceeEEEEecCC-CEEEEEEcCCcEEEEecCC-----cccceEeeeeecCCCcc
Q psy14815 156 KSVWV--WEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDK-----AEADWINFATLKSHTST 227 (479)
Q Consensus 156 g~i~v--wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~i~d~~~-----~~~~~~~~~~~~~~~~~ 227 (479)
..+.+ +|..+ .. .+.. .. +..+.|++ ..+++.+.||.+.+.|+.. ++........+.....+
T Consensus 147 ~~v~V~~iD~~t---v~---~i~v-~~---~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P 216 (368)
T 1mda_H 147 AAAGLSVPGASD---DQ---LTKS-AS---CFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQA 216 (368)
T ss_dssp CEEEEEETTTEE---EE---EEEC-SS---CCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCC
T ss_pred CeEEEEEEchhh---ce---EEEC-CC---ceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCc
Confidence 56888 78765 12 1211 01 11233443 3455667788888888875 22100000011112233
Q ss_pred EEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEec---------cccccEEEEEecCCCCeE
Q psy14815 228 VWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG---------HHGRTIYDISWCHLTDLI 298 (479)
Q Consensus 228 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~i~~l~~~~~~~~l 298 (479)
. . ++++..++..+. +.+.+.|...... +.+..+.. ........++++|+++.+
T Consensus 217 ~---~-~~~~~~~~~vs~-~~V~viD~~~~~~-------------~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~l 278 (368)
T 1mda_H 217 A---Q-ANYPGMLVWAVA-SSILQGDIPAAGA-------------TMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGI 278 (368)
T ss_dssp E---E-ETTTTEEEECBS-SCCEEEECCSSCC-------------EEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEE
T ss_pred c---c-cccCCEEEEEcC-CEEEEEECCCCcc-------------eEEEEEEeccccccccccccCcceeeEEcCCCCEE
Confidence 3 3 566666666666 8999999743211 11111100 001111226899999887
Q ss_pred EEEeC---------CCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCc
Q psy14815 299 ATACG---------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 299 ~~~~~---------dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~ 352 (479)
.++.. ++.+.++|+.+.+ .+..+..+ .....++|+|||+++..
T Consensus 279 yV~~~~~~~~~~~~~~~~~ViD~~t~~---------vv~~i~vg--~~p~gi~~s~Dg~~l~v 330 (368)
T 1mda_H 279 MILTVEHSRSCLAAAENTSSVTASVGQ---------TSGPISNG--HDSDAIIAAQDGASDNY 330 (368)
T ss_dssp EEEEEECSSCTTSCEEEEEEEESSSCC---------EEECCEEE--EEECEEEECCSSSCEEE
T ss_pred EEEeccccCcccccCCCEEEEECCCCe---------EEEEEECC--CCcceEEECCCCCEEEE
Confidence 76543 2356699999987 45555323 26889999999987643
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.94 E-value=1.6e-07 Score=95.47 Aligned_cols=261 Identities=9% Similarity=0.085 Sum_probs=157.7
Q ss_pred CCeEEEeeCCCcEEEEecccccccccccCC------------C--ccceEEEee------cCCcEEEecCCCCCCceeee
Q psy14815 23 GTMISSCGEDKNIRLWVMVIREPYEKLHGL------------P--VETSLRQLV------EDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 23 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~------------~--~~~~~~~~~------~~~~i~~w~~~~~~~~~~~~ 82 (479)
+..++.++.|+.|..+|..+|+.+..+... + .+..++... .++.+..||..+....+...
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 567888889999999999999887554432 1 022333332 25788889888655544433
Q ss_pred EEecc--------------------------ccCCcEEEEEECCCCCEEEEEECCCe-------------------EEEE
Q psy14815 83 AILSD--------------------------GHQRTIRETAWSPCGNFIASASFDAT-------------------TAVW 117 (479)
Q Consensus 83 ~~~~~--------------------------~~~~~v~~v~~~~~~~~l~t~~~dg~-------------------i~iw 117 (479)
..... +.......++++|++.+++.++.++. |..+
T Consensus 201 ~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~Al 280 (689)
T 1yiq_A 201 TVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAV 280 (689)
T ss_dssp SSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEE
T ss_pred ccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 11000 11111235788888889999887764 9999
Q ss_pred ECCCCeEEEeEEEeCCC-------CcEEEEEEcCCCC---EEEEEeCCCcEEEEEeCCCCceeeeeee----ec------
Q psy14815 118 DKRSGQFECNATLEGHE-------NEVKSVTWSKNGQ---FLATCSRDKSVWVWEVGEEDEYECAAVI----NA------ 177 (479)
Q Consensus 118 d~~~~~~~~~~~~~~~~-------~~v~~l~~~~~~~---~l~~~~~dg~i~vwd~~~~~~~~~~~~~----~~------ 177 (479)
|..+|+..-......|. .+........+|+ .++.++.+|.++++|.++++........ ..
T Consensus 281 D~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~ 360 (689)
T 1yiq_A 281 NADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKT 360 (689)
T ss_dssp ETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTT
T ss_pred EccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccC
Confidence 99999843333322232 1222222223564 7889999999999999988543111000 00
Q ss_pred ---------------cc-----------cceeEEEEecCCCEEEEEEc--------------------------------
Q psy14815 178 ---------------HI-----------QDVKKVRFHPFDNILASASY-------------------------------- 199 (479)
Q Consensus 178 ---------------~~-----------~~v~~l~~~~~~~~l~~~~~-------------------------------- 199 (479)
.. ..-..++|+|+..++++...
T Consensus 361 ~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p 440 (689)
T 1yiq_A 361 GRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMP 440 (689)
T ss_dssp TEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCC
T ss_pred CCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccC
Confidence 00 00123788998877776532
Q ss_pred -------------CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCC
Q psy14815 200 -------------DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTP 266 (479)
Q Consensus 200 -------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 266 (479)
+|.|..||+.+++..|.... + .++..-.+...+..++.++.||.++.||.+++
T Consensus 441 ~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~----~-~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG--------- 506 (689)
T 1yiq_A 441 EGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPY----V-TIFNGGTLSTAGNLVFEGSADGRVIAYAADTG--------- 506 (689)
T ss_dssp SSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEE----S-SSCCCCEEEETTTEEEEECTTSEEEEEETTTC---------
T ss_pred cccccCCCCCCCcceeEEEEECCCCCeEeEccC----C-CCccCccceECCCEEEEECCCCcEEEEECCCC---------
Confidence 37799999998886544322 2 12222345556889999999999999998554
Q ss_pred CCCCceEEEEEEeccccccEEEEEecCCCC-eEEEEeC
Q psy14815 267 DNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACG 303 (479)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~~ 303 (479)
+.+-+++........-+.|..+|+ |+++.+.
T Consensus 507 ------~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~~G 538 (689)
T 1yiq_A 507 ------EKLWEQPAASGVMAAPVTYSVDGEQYVTFMAG 538 (689)
T ss_dssp ------CEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred ------ccceeeeCCCCcccCceEEEECCEEEEEEEec
Confidence 445555543222233466677776 4554443
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.88 E-value=6e-07 Score=87.01 Aligned_cols=237 Identities=14% Similarity=0.074 Sum_probs=143.1
Q ss_pred CCcEEEecCCCCCCceeeeEEeccccCCcEEEEEE-C-CCCCEEEEEE------------------CCCeEEEEECCCCe
Q psy14815 64 DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW-S-PCGNFIASAS------------------FDATTAVWDKRSGQ 123 (479)
Q Consensus 64 ~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~-~-~~~~~l~t~~------------------~dg~i~iwd~~~~~ 123 (479)
++.|.+.|+.... ...+........+..+++ + |++.++++++ .++.+.+.|..+.+
T Consensus 111 ~~rVavIdl~t~~----~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~ 186 (595)
T 1fwx_A 111 NTRVARVRCDVMK----CDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWE 186 (595)
T ss_dssp TTEEEEEETTTTE----EEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTE
T ss_pred CCEEEEEECCCce----EeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCe
Confidence 3457777776321 111112233456788887 5 8999998885 24689999999987
Q ss_pred EEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC--------------------------------------cEEEEEeCC
Q psy14815 124 FECNATLEGHENEVKSVTWSKNGQFLATCSRDK--------------------------------------SVWVWEVGE 165 (479)
Q Consensus 124 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg--------------------------------------~i~vwd~~~ 165 (479)
. ..++.--. ....++++|+|+++++.+.+. .|.+.|.++
T Consensus 187 v--~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~ 263 (595)
T 1fwx_A 187 V--AWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRK 263 (595)
T ss_dssp E--EEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSG
T ss_pred E--EEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcc
Confidence 3 33333211 345678999999999988653 356666665
Q ss_pred CCceee-eeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCccc--------ceEeeeeecCCCccEEEEEEcc
Q psy14815 166 EDEYEC-AAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEA--------DWINFATLKSHTSTVWSLAFDR 235 (479)
Q Consensus 166 ~~~~~~-~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~--------~~~~~~~~~~~~~~v~~~~~~~ 235 (479)
.+. .. +..+.. .....++.++|||+++++++ .+.+|.++|+.+.+. ......... -......++|++
T Consensus 264 ~~~-~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~ 340 (595)
T 1fwx_A 264 EAS-SLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDG 340 (595)
T ss_dssp GGC-CSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECT
T ss_pred cCC-ceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECC
Confidence 110 11 122221 23456899999999877765 578899999986421 001122222 334578899999
Q ss_pred CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccE-----EEEEecCCCCeEEEEeC---CCe-
Q psy14815 236 IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTI-----YDISWCHLTDLIATACG---DDA- 306 (479)
Q Consensus 236 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-----~~l~~~~~~~~l~~~~~---dg~- 306 (479)
+|....+.-.|+.|.+||+....... ..+.....+.++..| ..+- ..+.++|||++|++++. |+.
T Consensus 341 dG~aY~t~~ldsqV~kwdi~~a~~~~-----~g~~~~~vi~kidV~-yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~ 414 (595)
T 1fwx_A 341 RGNAYTSLFLDSQVVKWNIEDAIRAY-----AGEKVDPIKDKLDVH-YQPGHLKTVMGETLDATNDWLVCLSKFSKDRFL 414 (595)
T ss_dssp TSEEEEEETTTTEEEEEEHHHHHHHH-----HTCSCCCEEEEEECS-SCEEEEEETTTTSTTCCSSEEEEEESCCTTSSC
T ss_pred CCeEEEEEecCCcEEEEEhhHhhhhh-----cccccceeEEEeecc-cccccceeccceEeCCCCCEEEEcCCCCccccc
Confidence 99444566689999999986521000 000112445666654 2221 22356799999998865 332
Q ss_pred ---------EEEcccCCCC
Q psy14815 307 ---------IRIFKENPEA 316 (479)
Q Consensus 307 ---------i~vw~~~~~~ 316 (479)
-.++|+..++
T Consensus 415 ~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 415 NVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp CCCSSCCEEEEEEECSSSS
T ss_pred cCCCCCCCcceEEEcCCCc
Confidence 2788885544
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=9.6e-07 Score=81.14 Aligned_cols=258 Identities=9% Similarity=-0.006 Sum_probs=145.2
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCC-CCceeeeE---Eecc
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESF-GNKFTAKA---ILSD 87 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~-~~~~~~~~---~~~~ 87 (479)
....+++|+++++++.++..++.|..|+..++... .+ ..... ........ ....
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~---------------------~~~~~~~~~~~~~g~~~~~~~ 76 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DF---------------------AYASPYWNKAFCENSTDAEKR 76 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EE---------------------EESCTTCCHHHHTTCCCGGGH
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EE---------------------ecccccccccccccccchhcc
Confidence 45677899999988888888899999986543221 11 00000 00000000 0000
Q ss_pred ccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEE-eC-CCCcEEEEEEcC-CCCEEEEEeC----------
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL-EG-HENEVKSVTWSK-NGQFLATCSR---------- 154 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~-~~-~~~~v~~l~~~~-~~~~l~~~~~---------- 154 (479)
.....+..+++.+++..|+.+...+.|..+|..++........ .+ .......+++.+ +|+..++-..
T Consensus 77 ~~~~~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~ 156 (322)
T 2fp8_A 77 PLCGRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQ 156 (322)
T ss_dssp HHHCCEEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHH
T ss_pred ccCCCCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccce
Confidence 1123578899997334555565556688898876642222111 11 113468899999 8876665432
Q ss_pred -------CCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEE-EcCCcEEEEecCCccc-ceEeeeeecCCC
Q psy14815 155 -------DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASA-SYDDTVKLFKEDKAEA-DWINFATLKSHT 225 (479)
Q Consensus 155 -------dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~i~d~~~~~~-~~~~~~~~~~~~ 225 (479)
++.|..||..+.+. . .+.........++++|+++.|..+ +..+.|..|++..... .......+ .
T Consensus 157 ~~~~~~~~g~v~~~d~~~~~~-~---~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~---~ 229 (322)
T 2fp8_A 157 IMDTSDKTGRLIKYDPSTKET-T---LLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI---P 229 (322)
T ss_dssp HHHHTCCCEEEEEEETTTTEE-E---EEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC---S
T ss_pred ehcccCCCceEEEEeCCCCEE-E---EeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeC---C
Confidence 36688888765421 1 111112335679999999866655 5568999999875321 11122222 2
Q ss_pred ccEEEEEEccCCCEEEEeeC----------CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccc---cccEEEEEec
Q psy14815 226 STVWSLAFDRIGSRLATCSD----------DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH---GRTIYDISWC 292 (479)
Q Consensus 226 ~~v~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~l~~~ 292 (479)
+ ...++++++|++.++... .+.|..+|.. ++.+..+.... -..++.+++
T Consensus 230 g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~----------------G~~~~~~~~~~g~~~~~~~~~~~- 291 (322)
T 2fp8_A 230 N-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF----------------GNILEVIPLPPPFAGEHFEQIQE- 291 (322)
T ss_dssp S-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT----------------SCEEEEEECCTTTTTSCCCEEEE-
T ss_pred C-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC----------------CCEEEEEECCCCCccccceEEEE-
Confidence 3 778999999987666544 3567777642 12233333221 234666666
Q ss_pred CCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 293 HLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 293 ~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
.++.++++...++.|..+++....
T Consensus 292 ~~g~L~v~~~~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 292 HDGLLYIGTLFHGSVGILVYDKKG 315 (322)
T ss_dssp ETTEEEEECSSCSEEEEEEC----
T ss_pred eCCEEEEeecCCCceEEEeccccc
Confidence 456666666677889999876543
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=98.84 E-value=3.5e-06 Score=79.21 Aligned_cols=258 Identities=7% Similarity=-0.041 Sum_probs=148.1
Q ss_pred CCCeEEEeeCCCcEEEEecccccccccccCC--------CccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcE
Q psy14815 22 QGTMISSCGEDKNIRLWVMVIREPYEKLHGL--------PVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 93 (479)
Q Consensus 22 ~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~--------~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v 93 (479)
++..++.++.++.|..+|..+++.+...... ..+..++....++.+..+|..+....+..............
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~ 181 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGE 181 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCC
Confidence 3567778888999999999998876544322 11345666677888999988754433332211000000000
Q ss_pred EEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCc-----EEEEEEcC--CCCEEEEEeCCCcEEEEEeCCC
Q psy14815 94 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE-----VKSVTWSK--NGQFLATCSRDKSVWVWEVGEE 166 (479)
Q Consensus 94 ~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-----v~~l~~~~--~~~~l~~~~~dg~i~vwd~~~~ 166 (479)
..... .+..++.++.++.+..+|..+++..-.......... +..+.-.| .+..++.++.++.+..+|.+++
T Consensus 182 ~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG 259 (376)
T 3q7m_A 182 SAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSG 259 (376)
T ss_dssp CCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTC
T ss_pred CCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCC
Confidence 11111 245788888899999999999874332222211000 00011111 3467888888999999999887
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCC
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD 246 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 246 (479)
+.. .... ......+.. ++..++.++.++.+..+|..+++..|... ......+...... +..|+.++.+
T Consensus 260 ~~~---w~~~--~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~---~~~~~~~~~~~~~--~~~l~v~~~~ 327 (376)
T 3q7m_A 260 QIM---WKRE--LGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQS---DLLHRLLTSPVLY--NGNLVVGDSE 327 (376)
T ss_dssp CEE---EEEC--CCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEEC---TTTTSCCCCCEEE--TTEEEEECTT
T ss_pred cEE---eecc--CCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeec---ccCCCcccCCEEE--CCEEEEEeCC
Confidence 432 2211 122333433 36678888899999999999887543321 0111122222222 5678889999
Q ss_pred CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEE-EEEecCCCCeEEEEeCCCeEEEcc
Q psy14815 247 ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIY-DISWCHLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 247 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~l~~~~~~~~l~~~~~dg~i~vw~ 311 (479)
|.|..+|...+. .+...... ...+. .... .+..|+.++.+|.|+.|+
T Consensus 328 g~l~~~d~~tG~---------------~~~~~~~~-~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 328 GYLHWINVEDGR---------------FVAQQKVD-SSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp SEEEEEETTTCC---------------EEEEEECC-TTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred CeEEEEECCCCc---------------EEEEEecC-CCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 999999985542 23333321 11221 1111 245677888899998886
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=98.84 E-value=2.4e-06 Score=80.37 Aligned_cols=258 Identities=7% Similarity=0.011 Sum_probs=151.0
Q ss_pred CCCeEEEeeCCCcEEEEecccccccccccCCC------------------ccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 22 QGTMISSCGEDKNIRLWVMVIREPYEKLHGLP------------------VETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 22 ~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
++..+++++.++.|..+|..+++.+....... .+..+.....++.+..+|.++....+....
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 35678888889999999999888765544311 123455566778888888875443333221
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcE-----EEEEEcCCCCEEEEEeCCCcE
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEV-----KSVTWSKNGQFLATCSRDKSV 158 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v-----~~l~~~~~~~~l~~~~~dg~i 158 (479)
.. .....++ . .+..++.++.++.|..+|..+++.. .......... ..... .+..+++++.++.+
T Consensus 132 ~~-~~~~~p~----~--~~~~v~v~~~~g~l~~~d~~tG~~~--W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l 200 (376)
T 3q7m_A 132 AG-EALSRPV----V--SDGLVLIHTSNGQLQALNEADGAVK--WTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRV 200 (376)
T ss_dssp SS-CCCSCCE----E--ETTEEEEECTTSEEEEEETTTCCEE--EEEECCC-----CCCCCCEE--ETTEEEECCTTTEE
T ss_pred CC-ceEcCCE----E--ECCEEEEEcCCCeEEEEECCCCcEE--EEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEE
Confidence 00 0011111 1 2457888889999999999999733 3333221110 11122 24568888889999
Q ss_pred EEEEeCCCCceeeeeeeecccc-----ceeEEEEec--CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEE
Q psy14815 159 WVWEVGEEDEYECAAVINAHIQ-----DVKKVRFHP--FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSL 231 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~~~~-----~v~~l~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~ 231 (479)
..+|..+++..-... ...... .+..+...| .+..++.++.++.+..+|..+++..|.. . ......+
T Consensus 201 ~~~d~~tG~~~w~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~----~--~~~~~~~ 273 (376)
T 3q7m_A 201 SAVLMEQGQMIWQQR-ISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKR----E--LGSVNDF 273 (376)
T ss_dssp EEEETTTCCEEEEEE-CCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEE----C--CCCEEEE
T ss_pred EEEECCCCcEEEEEe-cccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeec----c--CCCCCCc
Confidence 999998874322111 110000 000011111 2467778888999999999988753332 1 1223444
Q ss_pred EEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcc
Q psy14815 232 AFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 232 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~ 311 (479)
.. ++..++.++.++.|..+|...+.. +-.........+..... .+..|+.++.+|.+.++|
T Consensus 274 ~~--~~~~l~~~~~~g~l~~~d~~tG~~---------------~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d 334 (376)
T 3q7m_A 274 IV--DGNRIYLVDQNDRVMALTIDGGVT---------------LWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWIN 334 (376)
T ss_dssp EE--ETTEEEEEETTCCEEEEETTTCCE---------------EEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEE
T ss_pred eE--ECCEEEEEcCCCeEEEEECCCCcE---------------EEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEE
Confidence 44 366788888899999999855432 22222111111222222 245788888999999999
Q ss_pred cCCCC
Q psy14815 312 ENPEA 316 (479)
Q Consensus 312 ~~~~~ 316 (479)
..+++
T Consensus 335 ~~tG~ 339 (376)
T 3q7m_A 335 VEDGR 339 (376)
T ss_dssp TTTCC
T ss_pred CCCCc
Confidence 99887
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.81 E-value=2.8e-07 Score=84.91 Aligned_cols=179 Identities=11% Similarity=-0.002 Sum_probs=113.1
Q ss_pred CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccc
Q psy14815 102 GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 181 (479)
Q Consensus 102 ~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 181 (479)
+..+..++.++.+..+|.. ++ ...........+.++...+++. ++.++.++.+..+|.. ++ ...........
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~--~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~---~~~~~~~~~~~ 178 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GT--EKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GT---EKWRFKTNDAI 178 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SC--EEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SC---EEEEEECSSCC
T ss_pred CCEEEEEecCCEEEEEcCC-CC--EEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CC---EeEEEecCCCc
Confidence 5578888889999999988 65 3344444455566777776766 6677788999999988 43 22233333445
Q ss_pred eeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCC
Q psy14815 182 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA 261 (479)
Q Consensus 182 v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 261 (479)
+.++...+++.+.+ ++ +.|..+| .++.. ..........+.++...+++. +..++.++.|..+|. ..
T Consensus 179 ~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~----~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g---- 244 (330)
T 3hxj_A 179 TSAASIGKDGTIYF-GS--DKVYAIN-PDGTE----KWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DG---- 244 (330)
T ss_dssp CSCCEECTTCCEEE-ES--SSEEEEC-TTSCE----EEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TS----
T ss_pred eeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcE----EEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CC----
Confidence 67777777777554 44 7899999 55443 233333445677888887765 556677788888863 11
Q ss_pred CCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 262 GIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
..+..+... ...+..+.+.+++ .|..++.+|.|..+|. +++
T Consensus 245 -----------~~~~~~~~~-~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~ 285 (330)
T 3hxj_A 245 -----------TEKWRFKTG-KRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGT 285 (330)
T ss_dssp -----------CEEEEEECS-SCCCSCCEECTTS-CEEEECTTCEEEEECT-TSC
T ss_pred -----------CEeEEeeCC-CCccccceEcCCC-eEEEecCCCCEEEECC-CCc
Confidence 112222222 2233445555555 4666778889999985 443
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=2.8e-06 Score=74.57 Aligned_cols=198 Identities=9% Similarity=0.030 Sum_probs=126.8
Q ss_pred ceEEEEECCCCCeEEEeeC--CCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 13 RVWNVSWNPQGTMISSCGE--DKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
....+.|++++.++++.+. +++|++.|+.+++.+..+.. .. .
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l-----------------------------------~~-~ 65 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKM-----------------------------------DD-S 65 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEEC-----------------------------------CT-T
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEec-----------------------------------CC-C
Confidence 3679999998765565553 57999999999887665421 01 1
Q ss_pred CcEEEEEECCCCCEEE-EEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCce
Q psy14815 91 RTIRETAWSPCGNFIA-SASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 169 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 169 (479)
.....+++. ++.|+ +.-.++.+.++|..+.+ .+..+...... ...+++|++.++++..++.|.++|..+.+..
T Consensus 66 ~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~--v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~ 139 (266)
T 2iwa_A 66 YFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLS--NIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLI 139 (266)
T ss_dssp CCEEEEEEE--TTEEEEEETTCSEEEEEETTTTE--EEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEE
T ss_pred cceEEEEEe--CCEEEEEEecCCEEEEEECCCCc--EEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEE
Confidence 111234444 44454 44457899999999987 34445422111 2335567888888778889999999887543
Q ss_pred eeeeeeec--cccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC-------------CCccEEEEEEc
Q psy14815 170 ECAAVINA--HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS-------------HTSTVWSLAFD 234 (479)
Q Consensus 170 ~~~~~~~~--~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~ 234 (479)
..+..-.. .-...+.+.|. ++...+....++.|.+.|..+++. +..+.. .......++|+
T Consensus 140 ~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V----~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~ 214 (266)
T 2iwa_A 140 KKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTL----LGWILLPNLRKKLIDEGFRDIDVLNGIAWD 214 (266)
T ss_dssp EEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCE----EEEEECHHHHHHHHHTTCTTCCCEEEEEEE
T ss_pred EEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcE----EEEEECCCcccccccccccccCceEEEEEc
Confidence 33332211 11135678888 675555554678999999998774 222221 11356899999
Q ss_pred cCCCEE-EEeeCCCeEEEEeccCC
Q psy14815 235 RIGSRL-ATCSDDATVKIWKEYKP 257 (479)
Q Consensus 235 ~~~~~l-~s~~~dg~i~iwd~~~~ 257 (479)
|+++.+ +++...+.+.+.++...
T Consensus 215 ~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 215 QENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCCCEEEEECCCCCeEEEEEEecc
Confidence 998765 55557788888887543
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=4.8e-06 Score=73.06 Aligned_cols=197 Identities=7% Similarity=-0.012 Sum_probs=123.7
Q ss_pred CcEEEEEECCCCCEEEEEEC--CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEEeCCCC
Q psy14815 91 RTIRETAWSPCGNFIASASF--DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEED 167 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vwd~~~~~ 167 (479)
.....+.|++++.+.++.+. ++.|.++|+.+++......+..+ .....+++. +..++.+. .++.+.++|..+.+
T Consensus 21 ~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~-~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~ 97 (266)
T 2iwa_A 21 AFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS-YFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLS 97 (266)
T ss_dssp CCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT-CCEEEEEEE--TTEEEEEETTCSEEEEEETTTTE
T ss_pred CCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC-cceEEEEEe--CCEEEEEEecCCEEEEEECCCCc
Confidence 34689999998754454443 57999999999985443333332 223355554 45555554 57899999998873
Q ss_pred ceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC--C---CccEEEEEEccCCCEEEE
Q psy14815 168 EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS--H---TSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~---~~~v~~~~~~~~~~~l~s 242 (479)
.+..+..... ....++++++.++++..++.|.++|..+.+. ...+.- . -..++.+.|. ++...+.
T Consensus 98 ---v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v----~~~I~Vg~~~~p~~~~nele~~-dg~lyvn 167 (266)
T 2iwa_A 98 ---NIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKL----IKKHNVKYNGHRVIRLNELEYI-NGEVWAN 167 (266)
T ss_dssp ---EEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCE----EEEEECEETTEECCCEEEEEEE-TTEEEEE
T ss_pred ---EEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcE----EEEEEECCCCcccccceeEEEE-CCEEEEe
Confidence 3444432201 1233556787777777788999999987653 222221 1 1236678887 6654444
Q ss_pred eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc------------ccccEEEEEecCCCCe-EEEEeCCCeEEE
Q psy14815 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH------------HGRTIYDISWCHLTDL-IATACGDDAIRI 309 (479)
Q Consensus 243 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~i~~l~~~~~~~~-l~~~~~dg~i~v 309 (479)
...++.|.+.|.... +.+..+... .....+.++|+|+++. ++++...+.+.+
T Consensus 168 ~~~~~~V~vID~~tg---------------~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~ 232 (266)
T 2iwa_A 168 IWQTDCIARISAKDG---------------TLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFE 232 (266)
T ss_dssp ETTSSEEEEEETTTC---------------CEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEE
T ss_pred cCCCCeEEEEECCCC---------------cEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEE
Confidence 446789999998544 444555421 0135689999999875 455556678877
Q ss_pred cccCCC
Q psy14815 310 FKENPE 315 (479)
Q Consensus 310 w~~~~~ 315 (479)
.++...
T Consensus 233 i~l~~~ 238 (266)
T 2iwa_A 233 IKLHLV 238 (266)
T ss_dssp EEEEEC
T ss_pred EEEecc
Confidence 776543
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.75 E-value=1.7e-07 Score=90.69 Aligned_cols=237 Identities=9% Similarity=-0.007 Sum_probs=143.1
Q ss_pred CCCEEEEEEC-CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEE-c-CCCCEEEEEeC------------------CCcEE
Q psy14815 101 CGNFIASASF-DATTAVWDKRSGQFECNATLEGHENEVKSVTW-S-KNGQFLATCSR------------------DKSVW 159 (479)
Q Consensus 101 ~~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~-~-~~~~~l~~~~~------------------dg~i~ 159 (479)
||++++.... ++.|.+.|+.+.+...+..+.. ......+++ + |+++++++++. ++.+.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~-g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPN-AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSS-CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCC-CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 7788877665 4579999999997444444442 345788888 5 89999998852 35789
Q ss_pred EEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCC--------------------------------------
Q psy14815 160 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD-------------------------------------- 201 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg-------------------------------------- 201 (479)
+.|..+. +...++.--. ....++++|+|+++++.+.+.
T Consensus 179 vID~~t~---~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 179 AVDADKW---EVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp EEETTTT---EEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred EEECCCC---eEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 9999876 3333333212 345688999999999888653
Q ss_pred cEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee-CCCeEEEEeccCCCCC--CCCCCCCCCCceEEEEEE
Q psy14815 202 TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNS--AGIPTPDNDSVWKCVCTL 278 (479)
Q Consensus 202 ~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~ 278 (479)
.|.+.|.++.+.. ..+..+. -.....++.++|||+++++++ .+.+|.++|+.+.... ..+ ..........
T Consensus 255 ~V~VID~~~~~~~-~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l-----~~~~~v~~~v 327 (595)
T 1fwx_A 255 GVKVVDGRKEASS-LFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENA-----DPRSAVVAEP 327 (595)
T ss_dssp TEEEEECSGGGCC-SSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-----CGGGGEEECC
T ss_pred cEEEEeCcccCCc-eeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECccccccccccc-----CcccceEEEc
Confidence 3555565541100 0011111 112345789999999887655 6789999998743100 000 0111223333
Q ss_pred eccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC----CCCCceeeEEEeccc----cccccceeEEEecCCCCCC
Q psy14815 279 SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA----GDSDMVSFDLVHTEH----RAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 279 ~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~----~~~~~~~~~~~~~~~----~~h~~~v~~~~~sp~~~~l 350 (479)
.. +.....++|+|+|...++.-.|+.|.+||++... +.... +.+..+. .+|...-.....+|||++|
T Consensus 328 ~v--G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~---~vi~kidV~yqpGh~~~~~g~t~~~DGk~l 402 (595)
T 1fwx_A 328 EL--GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVD---PIKDKLDVHYQPGHLKTVMGETLDATNDWL 402 (595)
T ss_dssp BC--CSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCC---CEEEEEECSSCEEEEEETTTTSTTCCSSEE
T ss_pred CC--CCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccc---eeEEEeecccccccceeccceEeCCCCCEE
Confidence 32 5578899999999444555669999999998721 00000 1222221 1333222344678999998
Q ss_pred Cccc
Q psy14815 351 QKTN 354 (479)
Q Consensus 351 ~~~~ 354 (479)
....
T Consensus 403 ~~~N 406 (595)
T 1fwx_A 403 VCLS 406 (595)
T ss_dssp EEEE
T ss_pred EEcC
Confidence 5543
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=98.74 E-value=1.5e-05 Score=70.95 Aligned_cols=221 Identities=10% Similarity=0.008 Sum_probs=128.8
Q ss_pred cceEEEEECCCCCeEEEe-eCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 12 GRVWNVSWNPQGTMISSC-GEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
..+.+++|++++..|+.+ ...+.|..++...+.... . .....
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~------------------------------------~-~~~~~ 78 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTT------------------------------------I-IRQDL 78 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEE------------------------------------E-ECTTC
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEE------------------------------------E-EECCC
Confidence 345678888865555444 456778888764322110 0 01122
Q ss_pred CcEEEEEECCCCCEEEEE-ECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC---CCcEEEEEeCCC
Q psy14815 91 RTIRETAWSPCGNFIASA-SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR---DKSVWVWEVGEE 166 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~---dg~i~vwd~~~~ 166 (479)
.....+++++++..++.+ ...+.|.++++...... ............++++|++..|+.+.. .+.|..+++...
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~--~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~ 156 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR--VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT 156 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE--EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC
Confidence 467889999976655555 45679999998754321 122222246789999997666666654 367888887654
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee-
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS- 244 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~- 244 (479)
.. ..+ ..........++++|++..|..+. ..+.|..+|...... ...... ......++.. +..++.+.
T Consensus 157 ~~-~~~--~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~----~~~~~~-~~~P~gi~~d--~~~lyva~~ 226 (267)
T 1npe_A 157 NR-RIL--AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR----RKVLEG-LQYPFAVTSY--GKNLYYTDW 226 (267)
T ss_dssp CC-EEE--ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE----EEEEEC-CCSEEEEEEE--TTEEEEEET
T ss_pred Cc-EEE--EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCce----EEEecC-CCCceEEEEe--CCEEEEEEC
Confidence 21 111 112223568899999876655544 567899999875332 111122 2234566654 44555444
Q ss_pred CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC
Q psy14815 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 296 (479)
Q Consensus 245 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~ 296 (479)
..+.|..+|... ++.+.++..........+++.|++.
T Consensus 227 ~~~~v~~~d~~~---------------g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 227 KTNSVIAMDLAI---------------SKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TTTEEEEEETTT---------------TEEEEEECCSSCCCCCCEEEECSCC
T ss_pred CCCeEEEEeCCC---------------CCceEEEccccccccceeeecCccC
Confidence 567899998733 2445555432122356677777653
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.70 E-value=1.3e-06 Score=80.35 Aligned_cols=263 Identities=11% Similarity=-0.025 Sum_probs=156.2
Q ss_pred cccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCC--------ccceEEEeecCCcEEEecCCCCCCce
Q psy14815 8 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLP--------VETSLRQLVEDKNIRLWGKESFGNKF 79 (479)
Q Consensus 8 ~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~--------~~~~~~~~~~~~~i~~w~~~~~~~~~ 79 (479)
..+...+.++...+++.++ .++.+ +..+|. +++.+..+.... .+..+..+..++.+..++.. ....+
T Consensus 56 ~~~~~~~~~~~~~~~g~l~-v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~l~v~t~~~~l~~~d~~-g~~~~ 130 (330)
T 3hxj_A 56 KSGEIIECRPSIGKDGTIY-FGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIFEDILYVTSMDGHLYAINTD-GTEKW 130 (330)
T ss_dssp CGGGEEEECCEETTTTEEC-CSSCE--EEEECC-CGGGGGGSCC-----CCEEEETTEEEEECTTSEEEEECTT-SCEEE
T ss_pred ecCCCcccceEEecCCcEE-EecCc--EEEECC-CCcEEEEEECCCCcccCceEECCEEEEEecCCEEEEEcCC-CCEEE
Confidence 3345567888888877644 44444 999996 666655543221 13345555567778888876 22221
Q ss_pred eeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy14815 80 TAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 159 (479)
Q Consensus 80 ~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~ 159 (479)
.. ......+.++...+++. +..++.++.|..+|.. ++ ....+......+.++...+++.. ..++ +.+.
T Consensus 131 ~~-----~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~--~~~~~~~~~~~~~~~~~d~~g~l-~v~t--~~l~ 198 (330)
T 3hxj_A 131 RF-----KTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GT--EKWRFKTNDAITSAASIGKDGTI-YFGS--DKVY 198 (330)
T ss_dssp EE-----ECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SC--EEEEEECSSCCCSCCEECTTCCE-EEES--SSEE
T ss_pred EE-----cCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CC--EeEEEecCCCceeeeEEcCCCEE-EEEe--CEEE
Confidence 11 12233455566666665 6667788999999998 65 33344444556777777777764 4444 8899
Q ss_pred EEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE
Q psy14815 160 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
.+| .+++ ...........+.++...+++. |..++.++.+..+|.. +.. +.........+.++...+++ .
T Consensus 199 ~~d-~~g~---~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~-g~~----~~~~~~~~~~~~~~~~~~~g-~ 267 (330)
T 3hxj_A 199 AIN-PDGT---EKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPD-GTE----KWRFKTGKRIESSPVIGNTD-T 267 (330)
T ss_dssp EEC-TTSC---EEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTT-SCE----EEEEECSSCCCSCCEECTTS-C
T ss_pred EEC-CCCc---EEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECCC-CCE----eEEeeCCCCccccceEcCCC-e
Confidence 999 5542 2223333345577888887765 5667778888888753 332 22222223333345555555 5
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
|..++.+|.|..+|. .. +.+..+... ...+.++...+++. |..++.+|.+++...+..+
T Consensus 268 l~v~t~~ggl~~~d~-~g---------------~~~~~~~~~-~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 268 IYFGSYDGHLYAINP-DG---------------TEKWNFETG-SWIIATPVIDENGT-IYFGTRNGKFYALFNLEHH 326 (330)
T ss_dssp EEEECTTCEEEEECT-TS---------------CEEEEEECS-SCCCSCCEECTTCC-EEEECTTSCEEEEEC----
T ss_pred EEEecCCCCEEEECC-CC---------------cEEEEEEcC-CccccceEEcCCCE-EEEEcCCCeEEEEeccccc
Confidence 667888888999984 22 112223322 44566777777776 4558889999988766543
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.70 E-value=3.2e-06 Score=85.68 Aligned_cols=184 Identities=7% Similarity=-0.024 Sum_probs=111.3
Q ss_pred CCeEEEeeCCCcEEEEecccccccccccCCC-------------------ccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 23 GTMISSCGEDKNIRLWVMVIREPYEKLHGLP-------------------VETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 23 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+..++.++.++.|.-+|..+|+.+-++.... .+..++....++.+..+|.++....+....
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~ 145 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQT 145 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeeecc
Confidence 4567777778899999999888776553221 134466666788899999886555554432
Q ss_pred EeccccCCcEEEEEECC--CCCEEEEEEC------CCeEEEEECCCCeEEEeEEEeCC---C------------------
Q psy14815 84 ILSDGHQRTIRETAWSP--CGNFIASASF------DATTAVWDKRSGQFECNATLEGH---E------------------ 134 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~--~~~~l~t~~~------dg~i~iwd~~~~~~~~~~~~~~~---~------------------ 134 (479)
.. ......+ .-+| .+..++++.. +|.|..+|.++|+. +..+... .
T Consensus 146 ~~-~~~~~~~---~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~--~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 219 (668)
T 1kv9_A 146 TD-PAKPYSI---TGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKL--AWRFYTVPGDPALPYEHPELREAAKTWQG 219 (668)
T ss_dssp SC-TTSSCBC---CSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCE--EEEEESSCCCTTSCCSSHHHHHHHTTCCS
T ss_pred CC-CCCccee---cCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcE--EEEecccCCCCCccccccccccccccCCc
Confidence 10 0000011 1111 1345555543 58999999999974 3333211 0
Q ss_pred ----------CcEEEEEEcCCCCEEEEEeCCCc-------------------EEEEEeCCCCceeeeeeeeccc------
Q psy14815 135 ----------NEVKSVTWSKNGQFLATCSRDKS-------------------VWVWEVGEEDEYECAAVINAHI------ 179 (479)
Q Consensus 135 ----------~~v~~l~~~~~~~~l~~~~~dg~-------------------i~vwd~~~~~~~~~~~~~~~~~------ 179 (479)
.....+++.++...++.++.++. |..+|.++++..-..+ ...|.
T Consensus 220 ~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~-~~~~~~wd~~~ 298 (668)
T 1kv9_A 220 DQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQ-VTPGDSWDFTA 298 (668)
T ss_dssp SCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEE-SSTTCCSCCCC
T ss_pred cceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEee-cCCCccccccC
Confidence 01124678888888888887763 8999999885322221 11122
Q ss_pred -cceeEEEEecCCC---EEEEEEcCCcEEEEecCCccc
Q psy14815 180 -QDVKKVRFHPFDN---ILASASYDDTVKLFKEDKAEA 213 (479)
Q Consensus 180 -~~v~~l~~~~~~~---~l~~~~~dg~i~i~d~~~~~~ 213 (479)
.+.....+..+++ .++.++.+|.++++|..+++.
T Consensus 299 ~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 299 TQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp CSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 2222223333564 688999999999999998875
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.68 E-value=3.9e-06 Score=72.76 Aligned_cols=195 Identities=11% Similarity=0.095 Sum_probs=118.1
Q ss_pred ccccccccc--eEEEEECCCCCeEEEeeCCC--cEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 5 QTLKGHQGR--VWNVSWNPQGTMISSCGEDK--NIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 5 ~~l~~h~~~--V~~l~~s~~~~~l~t~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
+++ .|... ...+.|+ ++.++.+.+.+| .|+++|+++++.+..+...
T Consensus 35 ~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~---------------------------- 84 (262)
T 3nol_A 35 HSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG---------------------------- 84 (262)
T ss_dssp EEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC----------------------------
T ss_pred EEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC----------------------------
Confidence 444 35433 4778888 677777777765 8999999988876554210
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEE-ECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASA-SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 159 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~ 159 (479)
. .-.--.++. +++.|... ..++.+.++|..+.+. +.++..... -..+ +++++.|+.+..++.|.
T Consensus 85 -------~-~~FgeGit~--~g~~ly~ltw~~~~v~v~D~~t~~~--~~ti~~~~e-G~gl--t~dg~~L~~SdGs~~i~ 149 (262)
T 3nol_A 85 -------K-RYFGEGISD--WKDKIVGLTWKNGLGFVWNIRNLRQ--VRSFNYDGE-GWGL--THNDQYLIMSDGTPVLR 149 (262)
T ss_dssp -------T-TCCEEEEEE--ETTEEEEEESSSSEEEEEETTTCCE--EEEEECSSC-CCCE--EECSSCEEECCSSSEEE
T ss_pred -------C-ccceeEEEE--eCCEEEEEEeeCCEEEEEECccCcE--EEEEECCCC-ceEE--ecCCCEEEEECCCCeEE
Confidence 0 001112233 24444444 4578999999999874 444443221 1233 35677787777778899
Q ss_pred EEEeCCCCceeeeeeee-ccc-cceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEe-eeeec-------CCCccEE
Q psy14815 160 VWEVGEEDEYECAAVIN-AHI-QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN-FATLK-------SHTSTVW 229 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~-~~~-~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~-------~~~~~v~ 229 (479)
++|..+.+....+.... +.. ..++.+.|. +|+..+..-.+..|.+.|..+++..... ...+. .-....+
T Consensus 150 ~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlN 228 (262)
T 3nol_A 150 FLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLN 228 (262)
T ss_dssp EECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEE
T ss_pred EEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceE
Confidence 99998875443333221 111 234567776 6765555546789999999987742111 00011 1124568
Q ss_pred EEEEccCCCEEEEeeC
Q psy14815 230 SLAFDRIGSRLATCSD 245 (479)
Q Consensus 230 ~~~~~~~~~~l~s~~~ 245 (479)
.++|+|+++.|+..+.
T Consensus 229 GIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 229 GIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEEETTTTEEEEEET
T ss_pred EEEEcCCCCEEEEECC
Confidence 9999999888877764
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=98.64 E-value=4.8e-05 Score=69.12 Aligned_cols=233 Identities=13% Similarity=0.057 Sum_probs=134.3
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR 91 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 91 (479)
.....++|+++++++++-..++.|..||..... . .+| ....
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-~---------------------~~~-----------------~~~~ 72 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-Q---------------------IHA-----------------TVEG 72 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE-E---------------------EEE-----------------ECSS
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCce-E---------------------EEE-----------------eCCC
Confidence 457889999999877776678888888754211 0 011 1123
Q ss_pred cEEEEEECCCCCEEEEEECC--CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCC-c
Q psy14815 92 TIRETAWSPCGNFIASASFD--ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED-E 168 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~-~ 168 (479)
.+..+++.++++++++.... ..|..+|..+++...+.... .......++..+++..+++-..++.|.++|..... .
T Consensus 73 ~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~-~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~ 151 (306)
T 2p4o_A 73 KVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLP-DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGS 151 (306)
T ss_dssp EEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECT-TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCC-CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEe
Confidence 57889999999866655433 24777788888754333332 22234555555555444444458888888876431 0
Q ss_pred eeeee------eeeccccceeEEEEecCCCEEEEE-EcCCcEEEEecCC-cccc-eEeeeeecCCCccEEEEEEccCCCE
Q psy14815 169 YECAA------VINAHIQDVKKVRFHPFDNILASA-SYDDTVKLFKEDK-AEAD-WINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 169 ~~~~~------~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~i~d~~~-~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
..... .....-...+.+ +|+++.|..+ ...+.|..|++.. +... ....... .....++++++|+.
T Consensus 152 v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~----~~P~gi~vd~dG~l 225 (306)
T 2p4o_A 152 IWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ----TNIDDFAFDVEGNL 225 (306)
T ss_dssp EEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES----CCCSSEEEBTTCCE
T ss_pred EEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc----CCCCCeEECCCCCE
Confidence 00000 000111123445 7777655554 4567899999874 2211 1111111 23456899999988
Q ss_pred EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec---CCCCeEEEEeCCC
Q psy14815 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC---HLTDLIATACGDD 305 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~---~~~~~l~~~~~dg 305 (479)
+++....+.|.++|.. + . ...+..+... ....++++|. |+++.|++++..+
T Consensus 226 ~va~~~~~~V~~~~~~-G-~------------~~~~~~~~~~-~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 226 YGATHIYNSVVRIAPD-R-S------------TTIIAQAEQG-VIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp EEECBTTCCEEEECTT-C-C------------EEEEECGGGT-CTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred EEEeCCCCeEEEECCC-C-C------------EEEEeecccc-cCCceEEEEecccCCCCEEEEECCCC
Confidence 7777777889999852 1 1 0111122221 2468899998 8877766665543
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.64 E-value=6.4e-06 Score=84.79 Aligned_cols=198 Identities=13% Similarity=0.090 Sum_probs=112.0
Q ss_pred ceEEEEEC-CCCCeEEEeeC-C----CcEEEEecccc-cccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 13 RVWNVSWN-PQGTMISSCGE-D----KNIRLWVMVIR-EPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 13 ~V~~l~~s-~~~~~l~t~~~-d----g~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
.+...+|| |||++||-+.. + .+|+++|+.++ +.+...
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~------------------------------------ 218 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK------------------------------------ 218 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC------------------------------------
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc------------------------------------
Confidence 67889999 99998885532 2 24899998877 422100
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECC-----CeEEEEECCCCeEEEeEEEe-CCCCcEEEEEEcCCCCEEEEEeC---CC
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFD-----ATTAVWDKRSGQFECNATLE-GHENEVKSVTWSKNGQFLATCSR---DK 156 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~d-----g~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~~---dg 156 (479)
-......++|+||++.|+....+ ..|..+++.+++......+. ........+.|+|||++|+..+. ..
T Consensus 219 ---~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 295 (751)
T 2xe4_A 219 ---VSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETA 295 (751)
T ss_dssp ---EEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCE
T ss_pred ---ccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCc
Confidence 00112357899999888887765 36888898876422122222 23345678899999998887663 34
Q ss_pred cEEEEEeCCCC-ceeeeeeeeccccceeEEEEecCCCEEEEEEcC----CcEEEEecCCcccceEeeee-ecCCCc--cE
Q psy14815 157 SVWVWEVGEED-EYECAAVINAHIQDVKKVRFHPFDNILASASYD----DTVKLFKEDKAEADWINFAT-LKSHTS--TV 228 (479)
Q Consensus 157 ~i~vwd~~~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~-~~~~~~--~v 228 (479)
.|.++|+.++. ................++.|+..+.+++....+ ..|..+|+.++. .+. . +..+.. .+
T Consensus 296 ~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~-~~~---~~li~~~~~~~l 371 (751)
T 2xe4_A 296 EVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPS-DWS---HVLVDHSEDVFM 371 (751)
T ss_dssp EEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTT-CCC---CEEECCCSSEEE
T ss_pred eEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcc-cce---eeEECCCCCcEE
Confidence 58888887652 110011122233444555555444444444433 256666765421 111 2 222333 34
Q ss_pred EEEEEccCCCEEEEeeCCCeEEEEec
Q psy14815 229 WSLAFDRIGSRLATCSDDATVKIWKE 254 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~~~dg~i~iwd~ 254 (479)
..+.+. .+..+++...++..++|-+
T Consensus 372 ~~~~~~-~~~lv~~~~~~g~~~l~~~ 396 (751)
T 2xe4_A 372 ESIAVR-SNYLVVAGRRAGLTRIWTM 396 (751)
T ss_dssp EEEEEC-SSEEEEEEEETTEEEEEEE
T ss_pred EEEEEE-CCEEEEEEEeCCEEEEEEE
Confidence 555554 2334556667776555543
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.62 E-value=1.4e-05 Score=69.23 Aligned_cols=187 Identities=11% Similarity=0.053 Sum_probs=114.1
Q ss_pred CcEEEEEECCCCCEEEEEECCC--eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEEeCCCC
Q psy14815 91 RTIRETAWSPCGNFIASASFDA--TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEED 167 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vwd~~~~~ 167 (479)
.....+.|+ ++.+..+.+.+| .|+++|+.+++......+. .........++++.|+... .++.+.+||..+.+
T Consensus 43 ~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~---~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~ 118 (262)
T 3nol_A 43 AFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG---KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLR 118 (262)
T ss_dssp CEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC---TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCC
T ss_pred cccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC---CccceeEEEEeCCEEEEEEeeCCEEEEEECccCc
Confidence 344788898 676677777766 9999999999854444333 2232322233455566554 47899999999884
Q ss_pred ceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCC-ccEEEEEEccCCCEEEEeeCC
Q psy14815 168 EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT-STVWSLAFDRIGSRLATCSDD 246 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~~~d 246 (479)
.+..+.... ....++++++.|+.+..++.|.++|..+.+..........+.. ..++.+.|. +|+..+..-.+
T Consensus 119 ---~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~ 191 (262)
T 3nol_A 119 ---QVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQT 191 (262)
T ss_dssp ---EEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTS
T ss_pred ---EEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccC
Confidence 333443222 2233345677777777678899999987664211111111111 334567776 56544444467
Q ss_pred CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc-----------ccccEEEEEecCCCCeEEEEeC
Q psy14815 247 ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-----------HGRTIYDISWCHLTDLIATACG 303 (479)
Q Consensus 247 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~i~~l~~~~~~~~l~~~~~ 303 (479)
+.|.+.|..++ +.+..+... .....+.|+|+|+++.|++.+.
T Consensus 192 ~~I~vIDp~tG---------------~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 192 NKIVRIDPETG---------------KVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp SEEEEECTTTC---------------BEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CeEEEEECCCC---------------cEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 88999997554 333333321 1346789999999887777765
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=0.0003 Score=73.05 Aligned_cols=299 Identities=9% Similarity=0.027 Sum_probs=176.1
Q ss_pred eEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC----------CccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 14 VWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL----------PVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 14 V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
|.++...+++.+.+ ++.++.+..|+..+++........ .....+..+..++.+..|+... .......
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~--~~~~~~~ 251 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATEGAGLFLINPKT--KEIKNYL 251 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEEBSSCEEEEETTT--TEEEEEC
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEECCCCeEEEeCCC--CeEEEee
Confidence 88888888886555 555545888887665432211100 0112233344455677777652 1111111
Q ss_pred Ee----ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe-----CCCCcEEEEEEcCCCCEEEEEeC
Q psy14815 84 IL----SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE-----GHENEVKSVTWSKNGQFLATCSR 154 (479)
Q Consensus 84 ~~----~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~-----~~~~~v~~l~~~~~~~~l~~~~~ 154 (479)
.. ..-....|.++...++|.+.+ |+.+ -|.+||..+++........ -....|.++...++|. |..|+.
T Consensus 252 ~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~ 328 (795)
T 4a2l_A 252 HSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTY 328 (795)
T ss_dssp CCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEES
T ss_pred cCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEEC
Confidence 00 011246799999988886544 5555 5899998887633221110 1235799999988876 667777
Q ss_pred CCcEEEEEeCCCCceeeeeee----eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeee------cCC
Q psy14815 155 DKSVWVWEVGEEDEYECAAVI----NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL------KSH 224 (479)
Q Consensus 155 dg~i~vwd~~~~~~~~~~~~~----~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------~~~ 224 (479)
++-|..|+.....- ...... ......|.++...++|+ |..|+.++-|..||..++.. ...... ...
T Consensus 329 ~~Gl~~~~~~~~~~-~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~--~~~~~~~~~~~~~l~ 404 (795)
T 4a2l_A 329 FGGLNYYHPIRNRF-KNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRF--TSYTLQEDESARGIG 404 (795)
T ss_dssp SSCEEEECGGGGSS-EEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCE--EEECCC------CCS
T ss_pred CCCeEEeCCCcccc-eEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcE--EEEecCCCCcccCCC
Confidence 78888888765421 111110 01234588999888776 55678887899999876542 111110 012
Q ss_pred CccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEec----cccccEEEEEecCCCCeEEE
Q psy14815 225 TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG----HHGRTIYDISWCHLTDLIAT 300 (479)
Q Consensus 225 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~l~~~~~~~~l~~ 300 (479)
...|.++...++++.|..|+.++-|..||...... ..+.. .....|.++...+++.+.+.
T Consensus 405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~----------------~~~~~~~~~l~~~~v~~i~~d~~g~lwig 468 (795)
T 4a2l_A 405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQV----------------ENFNQRNSQLVNENVYAILPDGEGNLWLG 468 (795)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCE----------------EEECTTTSCCSCSCEEEEEECSSSCEEEE
T ss_pred CccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcE----------------EEeecCCCCcCCCeeEEEEECCCCCEEEE
Confidence 46799999988887566777777799998644321 11110 12457899999888876665
Q ss_pred EeCCCeEEEcccCCCCCCCCceeeEEEeccc------cccccceeEEEecCCCCCC
Q psy14815 301 ACGDDAIRIFKENPEAGDSDMVSFDLVHTEH------RAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 301 ~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~------~~h~~~v~~~~~sp~~~~l 350 (479)
. . +.+..|+..+++ ..... ......|.++...++|...
T Consensus 469 t-~-~Gl~~~~~~~~~----------~~~~~~~~~~~~~~~~~i~~i~~d~~g~lW 512 (795)
T 4a2l_A 469 T-L-SALVRFNPEQRS----------FTTIEKEKDGTPVVSKQITTLFRDSHKRLW 512 (795)
T ss_dssp E-S-SCEEEEETTTTE----------EEECCBCTTCCBCCCCCEEEEEECTTCCEE
T ss_pred e-c-CceeEEeCCCCe----------EEEccccccccccCCceEEEEEECCCCCEE
Confidence 4 3 458888877654 22111 1123567888888877644
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=98.59 E-value=3.2e-06 Score=85.78 Aligned_cols=241 Identities=8% Similarity=-0.001 Sum_probs=128.2
Q ss_pred CCcEEEEEECCCCCEEEEEEC-CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CC-----CcEEEEE
Q psy14815 90 QRTIRETAWSPCGNFIASASF-DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RD-----KSVWVWE 162 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~d-----g~i~vwd 162 (479)
.....++++..++++++.|+. ++.+.+||..++++.....+..... -.++...++++.++.|+ .+ ..+.+||
T Consensus 242 ~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd 320 (656)
T 1k3i_A 242 DMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYS 320 (656)
T ss_dssp CCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEE
T ss_pred CCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCcccc-ccceEEecCCeEEEEeCcccCCcccccceEeC
Confidence 334445677889999999984 4589999999988765544432222 23455667899999988 34 4689999
Q ss_pred eCCCCceeeeeee--eccccceeEEEEecCCCEEEEEEcCC---------cEEEEecCCcccceEeeeeecC------CC
Q psy14815 163 VGEEDEYECAAVI--NAHIQDVKKVRFHPFDNILASASYDD---------TVKLFKEDKAEADWINFATLKS------HT 225 (479)
Q Consensus 163 ~~~~~~~~~~~~~--~~~~~~v~~l~~~~~~~~l~~~~~dg---------~i~i~d~~~~~~~~~~~~~~~~------~~ 225 (479)
..+.. +..+... ......-....+..++..++.|+.+| .+..||..+... +........ ..
T Consensus 321 ~~t~~-W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w-~~~~~~~~~~~~~~~~~ 398 (656)
T 1k3i_A 321 PSSKT-WTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGD-VKSAGKRQSNRGVAPDA 398 (656)
T ss_dssp TTTTE-EEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCE-EEEEEECEETTEECCCC
T ss_pred CCCCc-ceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcce-eecCCccccccccCCCC
Confidence 98752 2221100 00000000011223455556665544 467788775441 111111110 01
Q ss_pred ccEEEEEEcc-CCCEEEEeeCCC-----------eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC
Q psy14815 226 STVWSLAFDR-IGSRLATCSDDA-----------TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 293 (479)
Q Consensus 226 ~~v~~~~~~~-~~~~l~s~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~ 293 (479)
..-.++.|.. +++.++.|+.++ .|.+||.... .|..+..-.......-.+....|
T Consensus 399 ~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~-------------~W~~~~~~~mp~~R~~~~~~~l~ 465 (656)
T 1k3i_A 399 MCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS-------------PNTVFASNGLYFARTFHTSVVLP 465 (656)
T ss_dssp BTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSC-------------CEEEECTTCCSSCCBSCEEEECT
T ss_pred CCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC-------------CeeEEccCCCCCCcccCCeEECC
Confidence 1223455543 567777777532 5666665321 23222100111122233456678
Q ss_pred CCCeEEEEeCC-----------CeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 294 LTDLIATACGD-----------DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 294 ~~~~l~~~~~d-----------g~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
++++++.|+.+ ..+.+||..+.+ +..+.... .....-.+..+.|+++.+..++
T Consensus 466 ~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~-------W~~~~~~~-~~R~~hs~a~ll~dg~v~v~GG 529 (656)
T 1k3i_A 466 DGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT-------FYKQNPNS-IVRVYHSISLLLPDGRVFNGGG 529 (656)
T ss_dssp TSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE-------EEECCCCS-SCCCTTEEEEECTTSCEEEEEC
T ss_pred CCCEEEECCcccCcCcCCCCcccceEEEcCCCCc-------eeecCCCC-CccccccHhhcCCCcEEEecCC
Confidence 99999998864 468899987654 22222111 1111223455678998886654
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=0.00035 Score=72.57 Aligned_cols=308 Identities=8% Similarity=-0.021 Sum_probs=175.7
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC------C----------CccceEEEeecCCcEEEecCCC
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG------L----------PVETSLRQLVEDKNIRLWGKES 74 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~------~----------~~~~~~~~~~~~~~i~~w~~~~ 74 (479)
...|.++...++|.+.+ |+.+ -|.+||..++........ . .....+..+..++.+..++...
T Consensus 262 ~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~ 339 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIR 339 (795)
T ss_dssp CSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGG
T ss_pred CCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCc
Confidence 35699999998887555 4444 488898765543211100 0 0122333444456677776542
Q ss_pred CCCceeeeEEe---ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe------CCCCcEEEEEEcCC
Q psy14815 75 FGNKFTAKAIL---SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE------GHENEVKSVTWSKN 145 (479)
Q Consensus 75 ~~~~~~~~~~~---~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~------~~~~~v~~l~~~~~ 145 (479)
.. ....... ..-....|.++...++|. |..|+.++-|..||..+++......-. -....|.++...++
T Consensus 340 ~~--~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~ 416 (795)
T 4a2l_A 340 NR--FKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEK 416 (795)
T ss_dssp GS--SEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETT
T ss_pred cc--ceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCC
Confidence 11 1111000 011245799999988775 555777778999998887543221100 12357899999888
Q ss_pred CCEEEEEeCCCcEEEEEeCCCCceeeeeee--eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeee--
Q psy14815 146 GQFLATCSRDKSVWVWEVGEEDEYECAAVI--NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL-- 221 (479)
Q Consensus 146 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~--~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-- 221 (479)
++.|..|+.++-+..||..+++. ...... ......|.++...+++++.+ |+. +-+..||..++.. ......
T Consensus 417 g~~lWigt~~~Gl~~~d~~~~~~-~~~~~~~~~l~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~--~~~~~~~~ 491 (795)
T 4a2l_A 417 KSLVYIGTHAGGLSILHRNSGQV-ENFNQRNSQLVNENVYAILPDGEGNLWL-GTL-SALVRFNPEQRSF--TTIEKEKD 491 (795)
T ss_dssp TTEEEEEETTTEEEEEETTTCCE-EEECTTTSCCSCSCEEEEEECSSSCEEE-EES-SCEEEEETTTTEE--EECCBCTT
T ss_pred CCEEEEEeCcCceeEEeCCCCcE-EEeecCCCCcCCCeeEEEEECCCCCEEE-Eec-CceeEEeCCCCeE--EEcccccc
Confidence 87677788877899999877532 111100 01235688999888887554 444 4588899876432 111111
Q ss_pred --cCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEE
Q psy14815 222 --KSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA 299 (479)
Q Consensus 222 --~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~ 299 (479)
......|.++...++|...+ |+. +.|..||...... .+... ....+-....|.++...++|.+.+
T Consensus 492 ~~~~~~~~i~~i~~d~~g~lWi-gt~-~Gl~~~~~~~~~~--~~~~~---------~~~~~l~~~~i~~i~~d~~g~lWi 558 (795)
T 4a2l_A 492 GTPVVSKQITTLFRDSHKRLWI-GGE-EGLSVFKQEGLDI--QKASI---------LPVSNVTKLFTNCIYEASNGIIWV 558 (795)
T ss_dssp CCBCCCCCEEEEEECTTCCEEE-EES-SCEEEEEEETTEE--EECCC---------SCSCGGGGSCEEEEEECTTSCEEE
T ss_pred ccccCCceEEEEEECCCCCEEE-EeC-CceEEEeCCCCeE--EEecC---------CCCCCCCCCeeEEEEECCCCCEEE
Confidence 11236789999998887655 444 4588888643211 00000 000011245789999999888666
Q ss_pred EEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 300 TACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 300 ~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
+.. . .+..||..+++ +........-....|.++...++|...
T Consensus 559 gT~-~-Gl~~~d~~~~~-------~~~~~~~~gl~~~~i~~i~~d~~g~lW 600 (795)
T 4a2l_A 559 GTR-E-GFYCFNEKDKQ-------IKRYNTTNGLPNNVVYGILEDSFGRLW 600 (795)
T ss_dssp EES-S-CEEEEETTTTE-------EEEECGGGTCSCSCEEEEEECTTSCEE
T ss_pred EeC-C-CceeECCCCCc-------EEEeCCCCCCchhheEEEEECCCCCEE
Confidence 543 3 67788876653 111111111113457788888877654
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.58 E-value=0.0002 Score=62.43 Aligned_cols=209 Identities=11% Similarity=0.116 Sum_probs=128.7
Q ss_pred ccccCCcEEEEEECCCCCEEE-EEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeC
Q psy14815 86 SDGHQRTIRETAWSPCGNFIA-SASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 164 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~ 164 (479)
..+-...+..++|+|++..|+ +...++.|...|.. ++......+.+. .....+++.+++.++++.-.++.+.++++.
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~-~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV-KDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSC-SSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC-CChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 345667899999999766554 56778899999998 653333333332 567899999888766666567889999987
Q ss_pred CCCceeeeeeee------ccccceeEEEEecCCCEEEEEEcCCcEEEEecCCc--ccceEeeee----ecCCCccEEEEE
Q psy14815 165 EEDEYECAAVIN------AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA--EADWINFAT----LKSHTSTVWSLA 232 (479)
Q Consensus 165 ~~~~~~~~~~~~------~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~----~~~~~~~v~~~~ 232 (479)
............ ........++|+|.++.|.++.+.....+|.++.. ......... -..+...+.+++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 654322122221 22345689999999887887777666666665411 000111100 011234568899
Q ss_pred EccCCCEEEE-eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEec-cc-----cccEEEEEecCCCCeEEEEeCCC
Q psy14815 233 FDRIGSRLAT-CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-HH-----GRTIYDISWCHLTDLIATACGDD 305 (479)
Q Consensus 233 ~~~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~i~~l~~~~~~~~l~~~~~dg 305 (479)
++|....++. ...+..|.++|.... ......+.. .+ -.....|+|.++|.+.++ |+-+
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~g~--------------~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n 244 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLVGE--------------VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPN 244 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTCC--------------EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTT
T ss_pred EcCCCCeEEEEECCCCeEEEEcCCCC--------------EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCc
Confidence 9997666554 445667888885311 111222221 11 125688999999985554 6766
Q ss_pred eEEEcc
Q psy14815 306 AIRIFK 311 (479)
Q Consensus 306 ~i~vw~ 311 (479)
.++.+.
T Consensus 245 ~~y~f~ 250 (255)
T 3qqz_A 245 RFYRFT 250 (255)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 666664
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.58 E-value=9e-05 Score=64.55 Aligned_cols=208 Identities=11% Similarity=0.113 Sum_probs=129.3
Q ss_pred ccccccccceEEEEECCCCCeEEE-eeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISS-CGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t-~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+.+.|-.+.+..++|+|++..|++ ...++.|...|.. ++.+..+.
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~--------------------------------- 65 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIP--------------------------------- 65 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEE---------------------------------
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEe---------------------------------
Confidence 345566678999999998765554 5677788888775 44433321
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeE-EEeEEEe------CCCCcEEEEEEcCCCCEEEEEeCCC
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF-ECNATLE------GHENEVKSVTWSKNGQFLATCSRDK 156 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~-~~~~~~~------~~~~~v~~l~~~~~~~~l~~~~~dg 156 (479)
.+-......+++.+++.++++.-.++.+.++++..... ....... ..+.....++|+|+++.|+++....
T Consensus 66 ---l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~ 142 (255)
T 3qqz_A 66 ---LDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN 142 (255)
T ss_dssp ---CSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS
T ss_pred ---cCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC
Confidence 11124577788888887666655677888888765431 1112221 1344578999999998888887776
Q ss_pred cEEEEEeCCCCceeeeeeee-------ccccceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEeeeeecC-C---
Q psy14815 157 SVWVWEVGEEDEYECAAVIN-------AHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLKS-H--- 224 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~~-------~~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~--- 224 (479)
...+|.++.......+..+. .+...+.+++++|. +++++....++.+..+|..... .....+.. .
T Consensus 143 p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~---~~~~~L~~g~~~l 219 (255)
T 3qqz_A 143 PIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEV---IGEMSLTKGSRGL 219 (255)
T ss_dssp SEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCE---EEEEECSTTGGGC
T ss_pred CceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCE---EEEEEcCCccCCc
Confidence 66777765211001111111 12335789999995 4566666677888999977432 22333332 1
Q ss_pred ---CccEEEEEEccCCCEEEEeeCCCeEEEEe
Q psy14815 225 ---TSTVWSLAFDRIGSRLATCSDDATVKIWK 253 (479)
Q Consensus 225 ---~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 253 (479)
-.+.-.|+|.++|+..+ .++-+.++.+.
T Consensus 220 ~~~~~qpEGia~d~~G~lyI-vsE~n~~y~f~ 250 (255)
T 3qqz_A 220 SHNIKQAEGVAMDASGNIYI-VSEPNRFYRFT 250 (255)
T ss_dssp SSCCCSEEEEEECTTCCEEE-EETTTEEEEEE
T ss_pred ccccCCCCeeEECCCCCEEE-EcCCceEEEEE
Confidence 13668999999998544 46666555554
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=4.3e-05 Score=75.73 Aligned_cols=185 Identities=7% Similarity=0.006 Sum_probs=105.2
Q ss_pred CCeEEEeeC-CCcEEEEec-ccccccccccCCC-------------------ccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 23 GTMISSCGE-DKNIRLWVM-VIREPYEKLHGLP-------------------VETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 23 ~~~l~t~~~-dg~v~iwd~-~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
+..++.++. ++.|.-+|. .+|+.+-++.... .+..++....++.+..+|..+....+..
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~ 141 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALDAKTGKINWEV 141 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCCCEEEEEECCCCCEEEEe
Confidence 345666666 788999998 8888765543211 1334555667788888888765544443
Q ss_pred eEEeccccCCcEEEEEECC--CCCEEEEEEC------CCeEEEEECCCCeEEEeEEEeCCCCc-----------------
Q psy14815 82 KAILSDGHQRTIRETAWSP--CGNFIASASF------DATTAVWDKRSGQFECNATLEGHENE----------------- 136 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~--~~~~l~t~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~----------------- 136 (479)
..... .....+. -+| .+..++.++. ++.|..+|.++++. +..+......
T Consensus 142 ~~~~~-~~~~~~~---~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~--~W~~~~~~~~~~~~~~p~~~~~~~~~G 215 (571)
T 2ad6_A 142 EVCDP-KVGSTLT---QAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGEL--KWRAFATGSDDSVRLAKDFNSANPHYG 215 (571)
T ss_dssp ECCCG-GGTCBCC---SCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCE--EEEEESSSCHHHHTBCTTTTTTCGGGC
T ss_pred cCCCC-Cccceec---cCCEEECCEEEEEecCCccCCCCEEEEEECCCCcE--EEEEccCCCccccccCccccccccccc
Confidence 32110 0000111 111 1345666654 78999999999973 3333321110
Q ss_pred --------------------E-EEEEEcCCCCEEEEEeCC----------------CcEEEEEeCCCCceeeeeeeecc-
Q psy14815 137 --------------------V-KSVTWSKNGQFLATCSRD----------------KSVWVWEVGEEDEYECAAVINAH- 178 (479)
Q Consensus 137 --------------------v-~~l~~~~~~~~l~~~~~d----------------g~i~vwd~~~~~~~~~~~~~~~~- 178 (479)
+ ..+++.++...++.++.+ +.|..+|.++++..-..+ ...|
T Consensus 216 ~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~-~~~~d 294 (571)
T 2ad6_A 216 QFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQ-KTPHD 294 (571)
T ss_dssp CSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEE-SSTTC
T ss_pred ccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEec-CCCCc
Confidence 0 135566666677766542 258999998875322211 1112
Q ss_pred -------ccceeEEEEecCCC---EEEEEEcCCcEEEEecCCcccce
Q psy14815 179 -------IQDVKKVRFHPFDN---ILASASYDDTVKLFKEDKAEADW 215 (479)
Q Consensus 179 -------~~~v~~l~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~ 215 (479)
..++. +...++|+ .++.++.+|.+.++|..+++..+
T Consensus 295 ~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w 340 (571)
T 2ad6_A 295 EWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIV 340 (571)
T ss_dssp SSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEE
T ss_pred ccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEe
Confidence 12221 22224673 57788899999999999887543
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=3.3e-05 Score=70.79 Aligned_cols=202 Identities=7% Similarity=-0.055 Sum_probs=121.9
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC-----------------CCCcEEEEEEcCCCCEEEEEe
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG-----------------HENEVKSVTWSKNGQFLATCS 153 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~-----------------~~~~v~~l~~~~~~~~l~~~~ 153 (479)
....+++|.+++++++++..++.|..||..+++......... ....+..+++.++...|+++.
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 456778899999878888889999999988765332211000 013578999997333466665
Q ss_pred CCCcEEEEEeCCCCceeeeee-eec-cccceeEEEEec-CCCEEEEEEc-----------------CCcEEEEecCCccc
Q psy14815 154 RDKSVWVWEVGEEDEYECAAV-INA-HIQDVKKVRFHP-FDNILASASY-----------------DDTVKLFKEDKAEA 213 (479)
Q Consensus 154 ~dg~i~vwd~~~~~~~~~~~~-~~~-~~~~v~~l~~~~-~~~~l~~~~~-----------------dg~i~i~d~~~~~~ 213 (479)
..+.+..+|..++.. ..+.. ... .......+++.+ +|++.++-.. ++.|..||..++..
T Consensus 99 ~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 99 CYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp TTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred CCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 556688888664321 11111 111 112467899999 8987666432 36788888765442
Q ss_pred ceEeeeeecCCCccEEEEEEccCCCEEEEe-eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec
Q psy14815 214 DWINFATLKSHTSTVWSLAFDRIGSRLATC-SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 292 (479)
Q Consensus 214 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 292 (479)
. ... ........++++++++.|+.+ +..+.|.+|++..... ...+.... . .. ...+++.
T Consensus 178 ~--~~~---~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~----------~~~~~~~~---~-~g-P~gi~~d 237 (322)
T 2fp8_A 178 T--LLL---KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKK----------GTAEVLVK---I-PN-PGNIKRN 237 (322)
T ss_dssp E--EEE---EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTT----------TCEEEEEE---C-SS-EEEEEEC
T ss_pred E--Eec---cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcC----------CccceEEe---C-CC-CCCeEEC
Confidence 1 111 111234568999999876655 5568899999753211 11122221 1 22 6789999
Q ss_pred CCCCeEEEEeC----------CCeEEEcccC
Q psy14815 293 HLTDLIATACG----------DDAIRIFKEN 313 (479)
Q Consensus 293 ~~~~~l~~~~~----------dg~i~vw~~~ 313 (479)
++|.++++... .+.|..++..
T Consensus 238 ~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 238 ADGHFWVSSSEELDGNMHGRVDPKGIKFDEF 268 (322)
T ss_dssp TTSCEEEEEEEETTSSTTSCEEEEEEEECTT
T ss_pred CCCCEEEEecCcccccccCCCccEEEEECCC
Confidence 99987766544 3556666653
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.54 E-value=2e-05 Score=79.85 Aligned_cols=230 Identities=9% Similarity=0.084 Sum_probs=138.6
Q ss_pred CCeEEEeeCCCcEEEEecccccccccccCC-----------C--ccceEEEeec------CCcEEEecCCCCCCceeeeE
Q psy14815 23 GTMISSCGEDKNIRLWVMVIREPYEKLHGL-----------P--VETSLRQLVE------DKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 23 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~-----------~--~~~~~~~~~~------~~~i~~w~~~~~~~~~~~~~ 83 (479)
+..++.++.|+.|..+|..+|+.+.++... + .+..++.... ++.+..+|.++....+....
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 457788888999999999999887655431 1 1223333332 47788888876555444332
Q ss_pred Eecc--------------------------ccCCcEEEEEECCCCCEEEEEECCC-------------------eEEEEE
Q psy14815 84 ILSD--------------------------GHQRTIRETAWSPCGNFIASASFDA-------------------TTAVWD 118 (479)
Q Consensus 84 ~~~~--------------------------~~~~~v~~v~~~~~~~~l~t~~~dg-------------------~i~iwd 118 (479)
.... +.......+++.|+...++.++.++ .|..+|
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD 276 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR 276 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence 1000 0111123467888888888887766 499999
Q ss_pred CCCCeEEEeEEEeCCC-------CcEEEEEEcCCCC---EEEEEeCCCcEEEEEeCCCCceeeeee--------ee-ccc
Q psy14815 119 KRSGQFECNATLEGHE-------NEVKSVTWSKNGQ---FLATCSRDKSVWVWEVGEEDEYECAAV--------IN-AHI 179 (479)
Q Consensus 119 ~~~~~~~~~~~~~~~~-------~~v~~l~~~~~~~---~l~~~~~dg~i~vwd~~~~~~~~~~~~--------~~-~~~ 179 (479)
..+|+..-......|. .+.....+..+|+ .++.++.+|.+.++|..+++....... +. ...
T Consensus 277 ~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g 356 (668)
T 1kv9_A 277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATG 356 (668)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTC
T ss_pred CCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccC
Confidence 9999844333332232 2233333333665 688999999999999988854311100 00 000
Q ss_pred cc------------------------eeEEEEecCCCEEEEEE------------------------------------c
Q psy14815 180 QD------------------------VKKVRFHPFDNILASAS------------------------------------Y 199 (479)
Q Consensus 180 ~~------------------------v~~l~~~~~~~~l~~~~------------------------------------~ 199 (479)
.+ -..++++|+..++.... .
T Consensus 357 ~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~ 436 (668)
T 1kv9_A 357 RPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVV 436 (668)
T ss_dssp CEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGC
T ss_pred CccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCc
Confidence 00 01267788766655421 2
Q ss_pred CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCC
Q psy14815 200 DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 257 (479)
Q Consensus 200 dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 257 (479)
+|.|..||..+++..|+.... .......+...+..++.++.|+.++.||.+.+
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~-----~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG 489 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYP-----THWNGGTLSTAGNLVFQGTAAGQMHAYSADKG 489 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEES-----SSCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred cceEEEEeCCCCcEEEEccCC-----CCCcCceeEeCCCEEEEECCcccchhhhhhcC
Confidence 378999999988865543221 12222234445788999999999999998554
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=98.53 E-value=0.00014 Score=65.95 Aligned_cols=233 Identities=11% Similarity=0.052 Sum_probs=136.2
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC--cEEEEEeCCCCc
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK--SVWVWEVGEEDE 168 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg--~i~vwd~~~~~~ 168 (479)
.....++|+++++++++-..++.|..||..... . ..+. ....+..+++.++++++++..... .|..+|..+++.
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-~--~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-Q--IHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE-E--EEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCce-E--EEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence 567889999999877776678999999987642 2 2222 235688999999998655543332 366667666532
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeee------eecCCCccEEEEEEccCCCEEEE
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFA------TLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
..+.... .......++..+++..+++-..++.|..+|...+........ .....-.....+ +++++.|+.
T Consensus 108 -~~~~~~~-~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv 183 (306)
T 2p4o_A 108 -ETLLTLP-DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYV 183 (306)
T ss_dssp -EEEEECT-TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEE
T ss_pred -EEEEeCC-CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEE
Confidence 2222211 112234455555555455444688899998765321000000 001111234555 788876655
Q ss_pred e-eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCc
Q psy14815 243 C-SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDM 321 (479)
Q Consensus 243 ~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 321 (479)
+ ...+.|..+++...... ........+ .....++++++|.++++....+.|.+++.. ++
T Consensus 184 ~d~~~~~I~~~~~~~~g~~---------~~~~~~~~~-----~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~----- 243 (306)
T 2p4o_A 184 SNTEKMLLLRIPVDSTDKP---------GEPEIFVEQ-----TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RS----- 243 (306)
T ss_dssp EETTTTEEEEEEBCTTSCB---------CCCEEEEES-----CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CC-----
T ss_pred EeCCCCEEEEEEeCCCCCC---------CccEEEecc-----CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CC-----
Confidence 4 45678999998542111 001111111 235668999999888777778899999875 33
Q ss_pred eeeEEEeccccccccceeEEEec---CCCCCCCccc
Q psy14815 322 VSFDLVHTEHRAHNQDVNCVAWN---PVVPEPQKTN 354 (479)
Q Consensus 322 ~~~~~~~~~~~~h~~~v~~~~~s---p~~~~l~~~~ 354 (479)
...+... ......+++++|. |++..|....
T Consensus 244 --~~~~~~~-~~~~~~p~~~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 244 --TTIIAQA-EQGVIGSTAVAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp --EEEEECG-GGTCTTEEEEEECCSTTTTTEEEEEE
T ss_pred --EEEEeec-ccccCCceEEEEecccCCCCEEEEEC
Confidence 0011122 1223568899999 8988775543
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.52 E-value=4.3e-05 Score=66.23 Aligned_cols=186 Identities=12% Similarity=-0.001 Sum_probs=115.6
Q ss_pred eEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcE
Q psy14815 14 VWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 93 (479)
Q Consensus 14 V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v 93 (479)
...+.|+ ++.++.+.+.+|.|+++|+++++.+..+ . .. .-.-
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-----------------------------------~~-~~Fg 98 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-R-----------------------------------LG-NIFA 98 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-E-----------------------------------CT-TCCE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-C-----------------------------------CC-Ccce
Confidence 4678887 3567777788889999999998876543 1 00 0011
Q ss_pred EEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeee
Q psy14815 94 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA 173 (479)
Q Consensus 94 ~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 173 (479)
..+++.. ++..+....++.+.+||..+.+. +.++.... .-..++ ++++.|+.+..++.|.++|..+.+....+.
T Consensus 99 eGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~--~~ti~~~~-eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~ 172 (268)
T 3nok_A 99 EGLASDG-ERLYQLTWTEGLLFTWSGMPPQR--ERTTRYSG-EGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQ 172 (268)
T ss_dssp EEEEECS-SCEEEEESSSCEEEEEETTTTEE--EEEEECSS-CCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred eEEEEeC-CEEEEEEccCCEEEEEECCcCcE--EEEEeCCC-ceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEE
Confidence 2233432 23444455688999999999974 44444322 223444 467888888778999999998875443333
Q ss_pred eeecccc---ceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEee-eee--------cCCCccEEEEEEccCCCEEE
Q psy14815 174 VINAHIQ---DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF-ATL--------KSHTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 174 ~~~~~~~---~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~--------~~~~~~v~~~~~~~~~~~l~ 241 (479)
.-. +.. .++.+.|. +|+..+....+..|.+.|..+++.....- ..+ ..-....+.|+|+|+++.|+
T Consensus 173 V~~-~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlf 250 (268)
T 3nok_A 173 VKL-RGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIF 250 (268)
T ss_dssp CEE-TTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEE
T ss_pred eCC-CCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEE
Confidence 222 222 34667777 67655544467899999999877421111 101 11224678999999877766
Q ss_pred EeeC
Q psy14815 242 TCSD 245 (479)
Q Consensus 242 s~~~ 245 (479)
..+.
T Consensus 251 VTGK 254 (268)
T 3nok_A 251 MTGK 254 (268)
T ss_dssp EEET
T ss_pred EeCC
Confidence 6553
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.47 E-value=4.6e-05 Score=65.42 Aligned_cols=195 Identities=12% Similarity=0.039 Sum_probs=117.9
Q ss_pred cccccccc--ceEEEEECCCCCeEEEeeCC--CcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 5 QTLKGHQG--RVWNVSWNPQGTMISSCGED--KNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 5 ~~l~~h~~--~V~~l~~s~~~~~l~t~~~d--g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
+++ .|.. -...+.|++ +.++.+.+.+ ..|+.+|+.+++.+..+...
T Consensus 13 ~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~---------------------------- 62 (243)
T 3mbr_X 13 KRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVP---------------------------- 62 (243)
T ss_dssp EEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECC----------------------------
T ss_pred EEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCC----------------------------
Confidence 444 4553 356899986 5666666665 48999999998876654210
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 160 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~v 160 (479)
.+ -.--.+++. .++.......++.+.+||..+.+. +.++..... -..++ +++..|+++..++.|.+
T Consensus 63 -------~~-~fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~--~~ti~~~~~-Gwglt--~dg~~L~vSdgs~~l~~ 128 (243)
T 3mbr_X 63 -------PP-YFGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTP--RARFRYPGE-GWALT--SDDSHLYMSDGTAVIRK 128 (243)
T ss_dssp -------TT-CCEEEEEEE-TTEEEEEESSSSEEEEEETTTTEE--EEEEECSSC-CCEEE--ECSSCEEEECSSSEEEE
T ss_pred -------CC-cceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcE--EEEEeCCCC-ceEEe--eCCCEEEEECCCCeEEE
Confidence 00 011122232 233344445678999999999874 444443222 23444 46777777777889999
Q ss_pred EEeCCCCceeeeeeeeccc---cceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEe-eeeec--------CCCccE
Q psy14815 161 WEVGEEDEYECAAVINAHI---QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN-FATLK--------SHTSTV 228 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~---~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~--------~~~~~v 228 (479)
+|..+.+....+..- .+. ..++.+.+. +|+..+..-.+..|.+.|..+++..... +..+. .-....
T Consensus 129 iDp~t~~~~~~I~V~-~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vl 206 (243)
T 3mbr_X 129 LDPDTLQQVGSIKVT-AGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVL 206 (243)
T ss_dssp ECTTTCCEEEEEECE-ETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCE
T ss_pred EeCCCCeEEEEEEEc-cCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCce
Confidence 999887543333322 122 234566766 5665554446778999999987742111 11111 122467
Q ss_pred EEEEEccCCCEEEEeeC
Q psy14815 229 WSLAFDRIGSRLATCSD 245 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~~~ 245 (479)
+.++++|+++.|+..+.
T Consensus 207 NGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 207 NGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEEEETTTTEEEEEET
T ss_pred EEEEEcCCCCEEEEECC
Confidence 89999998887776664
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.44 E-value=6.5e-05 Score=65.09 Aligned_cols=182 Identities=10% Similarity=0.019 Sum_probs=113.7
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEE-EeCCCcEEEEEeCCCCce
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT-CSRDKSVWVWEVGEEDEY 169 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~-~~~dg~i~vwd~~~~~~~ 169 (479)
.....+.|+ ++.+..+.+.+|.|+++|+++++..... +... ..-..+++. ++.|+. .-.++.+.+||..+.
T Consensus 55 ~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~-~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl--- 126 (268)
T 3nok_A 55 AFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGN-IFAEGLASD--GERLYQLTWTEGLLFTWSGMPP--- 126 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTT-CCEEEEEEC--SSCEEEEESSSCEEEEEETTTT---
T ss_pred cccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCC-cceeEEEEe--CCEEEEEEccCCEEEEEECCcC---
Confidence 445788887 4567777788899999999999854433 4432 122335554 444444 446889999999988
Q ss_pred eeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC--CC---ccEEEEEEccCCCEEEEee
Q psy14815 170 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS--HT---STVWSLAFDRIGSRLATCS 244 (479)
Q Consensus 170 ~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~~---~~v~~~~~~~~~~~l~s~~ 244 (479)
+.+..+..... -..++ ++++.|+.+..++.|.++|..+.+. ...+.- +. ..++.+.|. +|+..+..-
T Consensus 127 ~~~~ti~~~~e-GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v----~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw 198 (268)
T 3nok_A 127 QRERTTRYSGE-GWGLC--YWNGKLVRSDGGTMLTFHEPDGFAL----VGAVQVKLRGQPVELINELECA-NGVIYANIW 198 (268)
T ss_dssp EEEEEEECSSC-CCCEE--EETTEEEEECSSSEEEEECTTTCCE----EEEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred cEEEEEeCCCc-eeEEe--cCCCEEEEECCCCEEEEEcCCCCeE----EEEEEeCCCCcccccccccEEe-CCEEEEEEC
Confidence 44444443222 23444 4577777777789999999987664 222221 22 244667776 665444444
Q ss_pred CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc------------ccccEEEEEecCCCCeEEEEeC
Q psy14815 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH------------HGRTIYDISWCHLTDLIATACG 303 (479)
Q Consensus 245 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~i~~l~~~~~~~~l~~~~~ 303 (479)
.+..|.+.|..++ +.+..+... .....+.|+|+|+++.|++.+.
T Consensus 199 ~s~~I~vIDp~TG---------------~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 199 HSSDVLEIDPATG---------------TVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TCSEEEEECTTTC---------------BEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCCeEEEEeCCCC---------------cEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 6778999997544 334444321 1346789999998776666553
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.42 E-value=0.00041 Score=59.52 Aligned_cols=184 Identities=11% Similarity=0.030 Sum_probs=112.6
Q ss_pred CCcEEEEEECCCCCEEEEEECC--CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEE-eCCCcEEEEEeCCC
Q psy14815 90 QRTIRETAWSPCGNFIASASFD--ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC-SRDKSVWVWEVGEE 166 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~vwd~~~~ 166 (479)
......+.|++ +.+..+.+.+ +.|+.+|+.+++......+..+. .-..+++. ++.|+.. -.++.+.+||..+.
T Consensus 20 ~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~-fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl 95 (243)
T 3mbr_X 20 TAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY-FGAGIVAW--RDRLIQLTWRNHEGFVYDLATL 95 (243)
T ss_dssp TCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC-CEEEEEEE--TTEEEEEESSSSEEEEEETTTT
T ss_pred ccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc-ceeEEEEe--CCEEEEEEeeCCEEEEEECCcC
Confidence 45567899986 5556666664 49999999999854444443322 11234443 4445444 45889999999987
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC--CC---ccEEEEEEccCCCEEE
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS--HT---STVWSLAFDRIGSRLA 241 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~~---~~v~~~~~~~~~~~l~ 241 (479)
+.+..+..... -..++ +++..|+.+..++.|.++|..+.+. ...+.- +. ..++.+.+. +|+.++
T Consensus 96 ---~~~~ti~~~~~-Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~----~~~I~V~~~g~~~~~lNeLe~~-~G~lya 164 (243)
T 3mbr_X 96 ---TPRARFRYPGE-GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQ----VGSIKVTAGGRPLDNLNELEWV-NGELLA 164 (243)
T ss_dssp ---EEEEEEECSSC-CCEEE--ECSSCEEEECSSSEEEEECTTTCCE----EEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred ---cEEEEEeCCCC-ceEEe--eCCCEEEEECCCCeEEEEeCCCCeE----EEEEEEccCCcccccceeeEEe-CCEEEE
Confidence 44444443222 23444 5677777777788999999987654 222221 11 244566665 555444
Q ss_pred EeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc------------ccccEEEEEecCCCCeEEEEeC
Q psy14815 242 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH------------HGRTIYDISWCHLTDLIATACG 303 (479)
Q Consensus 242 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~i~~l~~~~~~~~l~~~~~ 303 (479)
..-.+..|.+.|..++ +.+..+... .....+.|+++|+++.|++.+.
T Consensus 165 nvw~s~~I~vIDp~tG---------------~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 165 NVWLTSRIARIDPASG---------------KVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EETTTTEEEEECTTTC---------------BEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EECCCCeEEEEECCCC---------------CEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 4445778999987554 333333311 2346789999998777766664
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=4.2e-05 Score=75.81 Aligned_cols=229 Identities=14% Similarity=0.087 Sum_probs=132.3
Q ss_pred CCeEEEeeCCCcEEEEecccccccccccCC-----------C--ccceEEEeec------CCcEEEecCCCCCCceeeeE
Q psy14815 23 GTMISSCGEDKNIRLWVMVIREPYEKLHGL-----------P--VETSLRQLVE------DKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 23 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~-----------~--~~~~~~~~~~------~~~i~~w~~~~~~~~~~~~~ 83 (479)
+..++.++.|+.+..+|..+|+.+.+.... + .+..++.... ++.+..+|.++....+....
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 557777888999999999998876543321 1 1234444443 67888898886554444332
Q ss_pred Eecc---------------------------------ccCCcEEEEEECCCCCEEEEEECC----------------CeE
Q psy14815 84 ILSD---------------------------------GHQRTIRETAWSPCGNFIASASFD----------------ATT 114 (479)
Q Consensus 84 ~~~~---------------------------------~~~~~v~~v~~~~~~~~l~t~~~d----------------g~i 114 (479)
.... +.......+++.++...++.+..+ +.|
T Consensus 195 ~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v 274 (571)
T 2ad6_A 195 TGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTI 274 (571)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEE
T ss_pred CCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEE
Confidence 1100 000001234566666677666532 369
Q ss_pred EEEECCCCeEEEeEEEeCCC--------CcEEEEEEcCCCC---EEEEEeCCCcEEEEEeCCCCceeeeeeee-------
Q psy14815 115 AVWDKRSGQFECNATLEGHE--------NEVKSVTWSKNGQ---FLATCSRDKSVWVWEVGEEDEYECAAVIN------- 176 (479)
Q Consensus 115 ~iwd~~~~~~~~~~~~~~~~--------~~v~~l~~~~~~~---~l~~~~~dg~i~vwd~~~~~~~~~~~~~~------- 176 (479)
..+|..+++..-......|. .++. +....+|+ .++.++.+|.+.++|..+++.......-.
T Consensus 275 ~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~ 353 (571)
T 2ad6_A 275 WGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKK 353 (571)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEE
T ss_pred EEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccccc
Confidence 99999999844333332221 2221 22224674 57788899999999998875322111000
Q ss_pred ---ccccce--------------------------eEEEEecCCCEEEEEE-----------------------------
Q psy14815 177 ---AHIQDV--------------------------KKVRFHPFDNILASAS----------------------------- 198 (479)
Q Consensus 177 ---~~~~~v--------------------------~~l~~~~~~~~l~~~~----------------------------- 198 (479)
....++ ..++|+|+..++++..
T Consensus 354 ~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 433 (571)
T 2ad6_A 354 VDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYP 433 (571)
T ss_dssp ECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred ccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceecc
Confidence 000111 2467888777776654
Q ss_pred --------cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCC
Q psy14815 199 --------YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 257 (479)
Q Consensus 199 --------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 257 (479)
.+|.|..||..+++..|..... ..+....+...+..++.++.||.|+.+|.+++
T Consensus 434 ~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-----~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG 495 (571)
T 2ad6_A 434 GPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-----FAAWGGTLYTKGGLVWYATLDGYLKALDNKDG 495 (571)
T ss_dssp CTTSTTSCCCEEEEEECTTTCCEEEEEEES-----SCCCSBCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred CccccCCCCCCeEEEEECCCCCEEEEecCC-----CCccceeEEECCCEEEEEcCCCeEEEEECCCC
Confidence 2478999999888765443221 11111222334667888999999999998554
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=0.00021 Score=70.93 Aligned_cols=186 Identities=6% Similarity=-0.081 Sum_probs=105.4
Q ss_pred CCeEEEeeC-CCcEEEEec-ccccccccccCCC---------------------ccce----EEEeecCCcEEEecCCCC
Q psy14815 23 GTMISSCGE-DKNIRLWVM-VIREPYEKLHGLP---------------------VETS----LRQLVEDKNIRLWGKESF 75 (479)
Q Consensus 23 ~~~l~t~~~-dg~v~iwd~-~~~~~~~~~~~~~---------------------~~~~----~~~~~~~~~i~~w~~~~~ 75 (479)
+..++.++. ++.|.-+|. .+|+.+-++.... .+.. ++....++.+..+|..+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 445666666 788988998 8887764443211 1223 555666788888887765
Q ss_pred CCceeeeEEeccccCCcEEE-EEECCCCCEEEEEE------CCCeEEEEECCCCeEEEeEEEeCCCCc------------
Q psy14815 76 GNKFTAKAILSDGHQRTIRE-TAWSPCGNFIASAS------FDATTAVWDKRSGQFECNATLEGHENE------------ 136 (479)
Q Consensus 76 ~~~~~~~~~~~~~~~~~v~~-v~~~~~~~~l~t~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~------------ 136 (479)
...+....... .....+.+ ..+. ++ .+++++ .+|.|+-+|.++|+. +..+......
T Consensus 142 ~~~W~~~~~~~-~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~--~W~~~~~~~~~~~~~~p~~~~~ 216 (599)
T 1w6s_A 142 ETVWKVENSDI-KVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQ--VWRAYATGPDKDLLLASDFNIK 216 (599)
T ss_dssp CEEEEEECCCG-GGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCE--EEEEESSSCHHHHTBCTTTTTT
T ss_pred CEEEeecCCCC-CccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcE--EEEEcCCCCccccccccccccc
Confidence 44444321110 00001110 0011 33 555554 379999999999973 3333322110
Q ss_pred -------------------------E-EEEEEcCCCCEEEEEeCCC----------------cEEEEEeCCCCceeeeee
Q psy14815 137 -------------------------V-KSVTWSKNGQFLATCSRDK----------------SVWVWEVGEEDEYECAAV 174 (479)
Q Consensus 137 -------------------------v-~~l~~~~~~~~l~~~~~dg----------------~i~vwd~~~~~~~~~~~~ 174 (479)
+ ..+++.++...++.++.++ .|..+|.++++..-.. .
T Consensus 217 ~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~-q 295 (599)
T 1w6s_A 217 NPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGY-Q 295 (599)
T ss_dssp CGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEE-E
T ss_pred cccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEe-e
Confidence 0 1345666777788777653 7899999988532221 2
Q ss_pred eeccc--------cceeEEEEe-cCC---CEEEEEEcCCcEEEEecCCcccce
Q psy14815 175 INAHI--------QDVKKVRFH-PFD---NILASASYDDTVKLFKEDKAEADW 215 (479)
Q Consensus 175 ~~~~~--------~~v~~l~~~-~~~---~~l~~~~~dg~i~i~d~~~~~~~~ 215 (479)
...|. .++. +... .+| +.++.++.+|.+.++|.++++..+
T Consensus 296 ~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw 347 (599)
T 1w6s_A 296 KTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVS 347 (599)
T ss_dssp SSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEE
T ss_pred cCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEee
Confidence 22221 1121 2222 456 567778899999999999887644
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.37 E-value=0.0025 Score=65.92 Aligned_cols=307 Identities=10% Similarity=-0.034 Sum_probs=168.6
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC------C----------CccceEEEeecCCcEEEecCCCC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG------L----------PVETSLRQLVEDKNIRLWGKESF 75 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~------~----------~~~~~~~~~~~~~~i~~w~~~~~ 75 (479)
..|.++...++|.+.+.. .+ -+.+||..+++...-... . .....+..+...+.+.+++....
T Consensus 211 ~~i~~i~~d~~g~lwigt-~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~ 288 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIGT-SK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNGIMILDLQQN 288 (781)
T ss_dssp SSEEEEEECTTCCEEEEE-TT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEEEESSSCEEEEETTCC
T ss_pred CceeEEEEcCCCCEEEEe-CC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCCCCeEEECCCCC
Confidence 568999998888766543 44 588898765443211100 0 01222333344366777766532
Q ss_pred CCceeee----E--E---eccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEE-------eCCCCcEEE
Q psy14815 76 GNKFTAK----A--I---LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL-------EGHENEVKS 139 (479)
Q Consensus 76 ~~~~~~~----~--~---~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~-------~~~~~~v~~ 139 (479)
....... . . ...-....|.++...++|. |..|+.++-|..++..++........ .-....|.+
T Consensus 289 ~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~ 367 (781)
T 3v9f_A 289 QFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSS 367 (781)
T ss_dssp ---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEE
T ss_pred eeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEE
Confidence 1110000 0 0 0012346799999988775 66677777899999877653322110 012356899
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeee-eeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEee
Q psy14815 140 VTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA-VINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 218 (479)
Q Consensus 140 l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 218 (479)
+...+++. |..|+.++-+..||..+... .... ........|.++...++++ |..|+.++-+..+|..++.. ...
T Consensus 368 i~~d~~g~-lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~--~~~ 442 (781)
T 3v9f_A 368 VCDDGQGK-LWIGTDGGGINVFENGKRVA-IYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKF--QII 442 (781)
T ss_dssp EEECTTSC-EEEEEBSSCEEEEETTEEEE-ECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEE--EEC
T ss_pred EEEcCCCC-EEEEeCCCcEEEEECCCCeE-EEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcE--EEe
Confidence 98887776 66677667788898765311 1110 0012235688888887776 44577767788998875442 111
Q ss_pred eeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEe--ccccccEEEEEecCCCC
Q psy14815 219 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS--GHHGRTIYDISWCHLTD 296 (479)
Q Consensus 219 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~l~~~~~~~ 296 (479)
.........|.++...+++. |..|+. +.|..||....... ...... ......|.++...++|.
T Consensus 443 ~~~~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~-------------~~~~~~~~~~~~~~i~~i~~d~~g~ 507 (781)
T 3v9f_A 443 ELEKNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVI-------------HHYDTSNSQLLENFVRSIAQDSEGR 507 (781)
T ss_dssp CSTTTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCC-------------EEECTTTSSCSCSCEEEEEECTTCC
T ss_pred ccCCCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEE-------------ecccCcccccccceeEEEEEcCCCC
Confidence 10012346789999888776 444555 45888886443211 011000 00135788999998887
Q ss_pred eEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCC
Q psy14815 297 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPE 349 (479)
Q Consensus 297 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 349 (479)
+.+.. .++-+..|+..+++ +........-....|.++...++|..
T Consensus 508 lWigt-~~~Gl~~~~~~~~~-------~~~~~~~~~l~~~~i~~i~~d~~g~l 552 (781)
T 3v9f_A 508 FWIGT-FGGGVGIYTPDMQL-------VRKFNQYEGFCSNTINQIYRSSKGQM 552 (781)
T ss_dssp EEEEE-SSSCEEEECTTCCE-------EEEECTTTTCSCSCEEEEEECTTSCE
T ss_pred EEEEE-cCCCEEEEeCCCCe-------EEEccCCCCCCCCeeEEEEECCCCCE
Confidence 66644 43446778776553 11111111112345677777777653
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.37 E-value=0.00014 Score=69.42 Aligned_cols=117 Identities=11% Similarity=0.136 Sum_probs=71.0
Q ss_pred CCcEEEEEECCCCCEEEEEECC-C----eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEEe
Q psy14815 90 QRTIRETAWSPCGNFIASASFD-A----TTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~d-g----~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vwd~ 163 (479)
......++|++++++|+.+... + .+.+.+. .+.......+.. ......++++| ++.++++-..++.|..++.
T Consensus 178 ~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~ 255 (430)
T 3tc9_A 178 LSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDF 255 (430)
T ss_dssp CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEET
T ss_pred CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEEC
Confidence 4567899999999966666542 1 3444443 332211122221 23456788999 6666666556788999998
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEE-EEEcCCcEEEEecCC
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILA-SASYDDTVKLFKEDK 210 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~i~i~d~~~ 210 (479)
..... ..+.... .....+.++|+|++++|. +-...+.|..++...
T Consensus 256 ~~~~~-~~~~~~~-~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 256 TTQET-TPLFTIQ-DSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp TTTEE-EEEEECS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CCCcE-EEEEEcC-CCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 76521 1111111 123467899999999554 445678899988764
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=98.36 E-value=0.00027 Score=70.12 Aligned_cols=229 Identities=11% Similarity=0.052 Sum_probs=130.7
Q ss_pred CCeEEEeeCCCcEEEEecccccccccccCC-----------C--ccc------eEEEee------cCCcEEEecCCCCCC
Q psy14815 23 GTMISSCGEDKNIRLWVMVIREPYEKLHGL-----------P--VET------SLRQLV------EDKNIRLWGKESFGN 77 (479)
Q Consensus 23 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~-----------~--~~~------~~~~~~------~~~~i~~w~~~~~~~ 77 (479)
+..++.++.|+.|.-+|..+|+.+-+.... + ... .++... .++.+..+|..+...
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 456777888999999999988876543321 1 112 333333 267788888876555
Q ss_pred ceeeeEEe--c-------------c---------------------ccCCcEEEEEECCCCCEEEEEEC-----------
Q psy14815 78 KFTAKAIL--S-------------D---------------------GHQRTIRETAWSPCGNFIASASF----------- 110 (479)
Q Consensus 78 ~~~~~~~~--~-------------~---------------------~~~~~v~~v~~~~~~~~l~t~~~----------- 110 (479)
.+...... . . +....-..+++.|+..+++.+..
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 55322100 0 0 00000123556677777777663
Q ss_pred ---------C----CeEEEEECCCCeEEEeEEEeCCC--------CcEEEEEEc-CCCC---EEEEEeCCCcEEEEEeCC
Q psy14815 111 ---------D----ATTAVWDKRSGQFECNATLEGHE--------NEVKSVTWS-KNGQ---FLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 111 ---------d----g~i~iwd~~~~~~~~~~~~~~~~--------~~v~~l~~~-~~~~---~l~~~~~dg~i~vwd~~~ 165 (479)
| +.|..+|..+|+..-......|. .++. +... .+|+ .++.++.+|.+.++|.++
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t 355 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSN 355 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTT
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCC
Confidence 2 58999999999844333333332 1221 2222 4664 788899999999999988
Q ss_pred CCceeeeeeee------c----cccc--------------------------------eeEEEEecCCCEEEEEE-----
Q psy14815 166 EDEYECAAVIN------A----HIQD--------------------------------VKKVRFHPFDNILASAS----- 198 (479)
Q Consensus 166 ~~~~~~~~~~~------~----~~~~--------------------------------v~~l~~~~~~~~l~~~~----- 198 (479)
++..-....-. . ...+ -..++++|+..++++..
T Consensus 356 G~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~ 435 (582)
T 1flg_A 356 GKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKE 435 (582)
T ss_dssp CCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEE
T ss_pred CCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcce
Confidence 75322111000 0 0000 01356677655555432
Q ss_pred ----------------------------cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEE
Q psy14815 199 ----------------------------YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 250 (479)
Q Consensus 199 ----------------------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 250 (479)
.+|.|..||+.+++..|+.........+. ....+..++.++.|+.++
T Consensus 436 ~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~-----~~tagglvf~g~~dg~l~ 510 (582)
T 1flg_A 436 DYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGV-----LATAGNLVFTGTGDGYFK 510 (582)
T ss_dssp EEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCC-----EEETTTEEEEECTTSEEE
T ss_pred eeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccc-----eEeCCCEEEEECCCCcEE
Confidence 25789999999888755543221111222 112367788899999999
Q ss_pred EEeccCC
Q psy14815 251 IWKEYKP 257 (479)
Q Consensus 251 iwd~~~~ 257 (479)
.||.+++
T Consensus 511 A~D~~tG 517 (582)
T 1flg_A 511 AFDAKSG 517 (582)
T ss_dssp EEETTTC
T ss_pred EEECCCC
Confidence 9998554
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.35 E-value=0.0014 Score=60.55 Aligned_cols=201 Identities=9% Similarity=0.004 Sum_probs=121.1
Q ss_pred CCcEEEEEECCCCCEEEEE-ECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEE-EEeCCCcEEEEEeCCCC
Q psy14815 90 QRTIRETAWSPCGNFIASA-SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSVWVWEVGEED 167 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~i~vwd~~~~~ 167 (479)
...+..++|++.+..|+.+ ...+.|..+++..+... ............+++.+.+..|+ +-...+.|.+.++....
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~--~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 149 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE--EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH 149 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCce--EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc
Confidence 3457899999866565554 45689999998876422 22222223457889987555554 44456789999987653
Q ss_pred ceeeeeeeeccccceeEEEEecCCCEEEEEE-cC-CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee-
Q psy14815 168 EYECAAVINAHIQDVKKVRFHPFDNILASAS-YD-DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS- 244 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~d-g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~- 244 (479)
. .............++++|.+..|.... .. +.|..++++.... .......-.....++++|++..|+.+.
T Consensus 150 ~---~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~----~~~~~~~~~~PnGla~d~~~~~lY~aD~ 222 (349)
T 3v64_C 150 R---KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR----RIIADTHLFWPNGLTIDYAGRRMYWVDA 222 (349)
T ss_dssp C---EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC----EESCCSSCSCEEEEEEETTTTEEEEEET
T ss_pred e---EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc----EEEEECCCCCcceEEEeCCCCEEEEEEC
Confidence 1 112222234568999999655555444 44 7788888875432 111122334578999998777666554
Q ss_pred CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 245 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
..+.|..+|+..... . ..+... ......+++ ..+.++++-...+.|..++..+++
T Consensus 223 ~~~~I~~~~~dG~~~-------------~--~~~~~~-~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 223 KHHVIERANLDGSHR-------------K--AVISQG-LPHPFAITV-FEDSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp TTTEEEEEETTSCSC-------------E--EEECSS-CSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCC
T ss_pred CCCEEEEEeCCCCce-------------E--EEEeCC-CCCceEEEE-ECCEEEEecCCCCeEEEEEccCCC
Confidence 557788888743211 1 111111 334567777 345555665667888888755544
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=98.34 E-value=0.00084 Score=66.60 Aligned_cols=186 Identities=8% Similarity=-0.077 Sum_probs=103.7
Q ss_pred CeEEEeeCCCcEEEEecccccccccccCCC-----------------ccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 24 TMISSCGEDKNIRLWVMVIREPYEKLHGLP-----------------VETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 24 ~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
..++.++.++.|.-+|..+|+.+-++.... .+..++....++.+..+|.++....+.......
T Consensus 69 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~ 148 (582)
T 1flg_A 69 GVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFADH 148 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEECSCG
T ss_pred CEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEeeecCCCC
Confidence 345555553448888988888765543321 134455666788888888876555544332110
Q ss_pred c----ccCCcEEEEEECCCCC-EEEEEE------CCCeEEEEECCCCeEEEeEEEeCCCCcE------------------
Q psy14815 87 D----GHQRTIRETAWSPCGN-FIASAS------FDATTAVWDKRSGQFECNATLEGHENEV------------------ 137 (479)
Q Consensus 87 ~----~~~~~v~~v~~~~~~~-~l~t~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~v------------------ 137 (479)
. ....++. ..=..+++ .+++++ .++.|.-+|..+|+..- ........+
T Consensus 149 ~~~~~~~~sP~v-~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W--~~~~~~~~~~p~~~~~~~~~g~~g~~~ 225 (582)
T 1flg_A 149 GAGYTMTGAPTI-VKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIW--MRPFVEGHMGRLNGKDSTVTGDVKAPS 225 (582)
T ss_dssp GGTCBCCSCCEE-EECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEE--EEESSTTCEEEETTEEEEESSCTTCTT
T ss_pred CcCcccccCCEE-eCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEe--ecCCCccccccccCccccccccccccc
Confidence 0 0011111 00001233 566654 37899999999997432 222110000
Q ss_pred -----------------------EEEEEcCCCCEEEEEeC--------------------C----CcEEEEEeCCCCcee
Q psy14815 138 -----------------------KSVTWSKNGQFLATCSR--------------------D----KSVWVWEVGEEDEYE 170 (479)
Q Consensus 138 -----------------------~~l~~~~~~~~l~~~~~--------------------d----g~i~vwd~~~~~~~~ 170 (479)
..+++.|+...++.++. | +.|..+|.++++..-
T Consensus 226 w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W 305 (582)
T 1flg_A 226 WPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKW 305 (582)
T ss_dssp SCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEE
T ss_pred CCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEE
Confidence 13456666677777663 2 579999998885322
Q ss_pred eeeeeeccc--------cceeEEEEe-cCC---CEEEEEEcCCcEEEEecCCcccc
Q psy14815 171 CAAVINAHI--------QDVKKVRFH-PFD---NILASASYDDTVKLFKEDKAEAD 214 (479)
Q Consensus 171 ~~~~~~~~~--------~~v~~l~~~-~~~---~~l~~~~~dg~i~i~d~~~~~~~ 214 (479)
.. ....|. .++. +... .+| ..++.++.+|.++++|.++++..
T Consensus 306 ~~-q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 359 (582)
T 1flg_A 306 FY-QHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQ 359 (582)
T ss_dssp EE-ESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred EE-eCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEe
Confidence 21 122221 1211 1221 456 37888999999999999988753
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=98.32 E-value=0.00028 Score=67.25 Aligned_cols=243 Identities=12% Similarity=0.102 Sum_probs=131.6
Q ss_pred cceEEEEECCC--CCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 12 GRVWNVSWNPQ--GTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 12 ~~V~~l~~s~~--~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
.....|+|+|+ +..|+.+...+.|+.+|..++..... ...
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~--------------------------------------~~~ 180 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIK--------------------------------------TTN 180 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEE--------------------------------------CCC
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEe--------------------------------------ecC
Confidence 34567888884 33444444337788887654443211 113
Q ss_pred CCcEEEEEECCCCCEEEEEECCC----e-EEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEEe
Q psy14815 90 QRTIRETAWSPCGNFIASASFDA----T-TAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg----~-i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vwd~ 163 (479)
......++++++++ |+.+...+ . +...+...+. .....+. .-.....++++| ++.+.++-..++.|+.+|.
T Consensus 181 ~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~-~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~ 257 (433)
T 4hw6_A 181 IGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGF-TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDP 257 (433)
T ss_dssp CSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTT-CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECT
T ss_pred CCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCe-ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEEC
Confidence 35678999999999 44444321 2 3333322221 1011121 123456788999 6665555556788999988
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEE-EcCCcEEEEecCCcccce---Eeeeee---c---------CCCcc
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASA-SYDDTVKLFKEDKAEADW---INFATL---K---------SHTST 227 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~---~~~~~~---~---------~~~~~ 227 (479)
.++.....+..... ...-..++|+|+++.|..+ ...+.|+.++........ ..+... . ..-..
T Consensus 258 ~~g~~~~~~~~~~~-~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~ 336 (433)
T 4hw6_A 258 ATGTLTEEEVMMDT-KGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWG 336 (433)
T ss_dssp TTCCEEEEEEECSC-CSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSS
T ss_pred CCCeEEEEEeccCC-CCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcC
Confidence 75532111111111 1223469999999855544 456789998865321100 011100 0 01123
Q ss_pred EEEEEE---------ccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc-----------------
Q psy14815 228 VWSLAF---------DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH----------------- 281 (479)
Q Consensus 228 v~~~~~---------~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 281 (479)
...+++ .+++.++++-...+.|+.++.. + . +.++.+.
T Consensus 337 P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~-G-~---------------v~t~~G~g~~~~~G~~dG~~~~~~ 399 (433)
T 4hw6_A 337 PNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPE-G-R---------------VTTYAGRGNSREWGYVDGELRSQA 399 (433)
T ss_dssp EEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTT-S-E---------------EEEEECCCTTCSSCCBCEETTTTC
T ss_pred CccEEEEccccccccCCCCcEEEEECCCCEEEEECCC-C-C---------------EEEEEeCCCCCccccCCCcccccc
Confidence 567888 6677666666667788888731 1 1 1111111
Q ss_pred ccccEEEEEec-CCCCeEEEEeCCCeEEEcccC
Q psy14815 282 HGRTIYDISWC-HLTDLIATACGDDAIRIFKEN 313 (479)
Q Consensus 282 ~~~~i~~l~~~-~~~~~l~~~~~dg~i~vw~~~ 313 (479)
.-.....|+++ +++.++++-..++.|+.++++
T Consensus 400 ~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 400 LFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp BCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 01246788998 566666666667788877653
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.32 E-value=0.0026 Score=65.83 Aligned_cols=305 Identities=10% Similarity=0.005 Sum_probs=169.5
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEeccccccccccc-------------CC----------CccceEEEeecCCcE
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLH-------------GL----------PVETSLRQLVEDKNI 67 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~-------------~~----------~~~~~~~~~~~~~~i 67 (479)
...|.++...++|.+. .|+..+-|.++|..++....... .. .....+-.+..++.+
T Consensus 257 ~~~i~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl 335 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLW-IATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGI 335 (781)
T ss_dssp CCCEEEEEECTTSEEE-EEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCE
T ss_pred CceEEEEEECCCCCEE-EEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeE
Confidence 3569999998888644 45554558888876554221110 00 011233344445667
Q ss_pred EEecCCCCCCceeeeEE------eccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEE-EeCCCCcEEEE
Q psy14815 68 RLWGKESFGNKFTAKAI------LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNAT-LEGHENEVKSV 140 (479)
Q Consensus 68 ~~w~~~~~~~~~~~~~~------~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~l 140 (479)
..++..... ...... ...-....|.++...+++. |..|+.++-|..||..+++...... .......|.++
T Consensus 336 ~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i 412 (781)
T 3v9f_A 336 NFISNAPPT--FHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCS 412 (781)
T ss_dssp EEECSSCCS--CEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEE
T ss_pred EEeCCCCCc--ceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEE
Confidence 777665311 111100 0011346799999888775 5566666679999987654322110 01234678999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeee
Q psy14815 141 TWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT 220 (479)
Q Consensus 141 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 220 (479)
...+++. |..|+.++-+..+|..+++. ............|.++...++++ |..|+. +-+..||..+.... ....
T Consensus 413 ~~d~~g~-lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~--~~~~ 486 (781)
T 3v9f_A 413 LKDSEGN-LWFGTYLGNISYYNTRLKKF-QIIELEKNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVI--HHYD 486 (781)
T ss_dssp EECTTSC-EEEEETTEEEEEECSSSCEE-EECCSTTTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCC--EEEC
T ss_pred EECCCCC-EEEEeccCCEEEEcCCCCcE-EEeccCCCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEE--eccc
Confidence 8887776 55577767788888766421 11110011345688888888776 444555 56888998765431 1111
Q ss_pred ec---CCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEe---ccccccEEEEEecCC
Q psy14815 221 LK---SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS---GHHGRTIYDISWCHL 294 (479)
Q Consensus 221 ~~---~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~l~~~~~ 294 (479)
.. .....|.++...++|...+ |+.++-|..||.... + ...+. +-....|.++...++
T Consensus 487 ~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~---------------~-~~~~~~~~~l~~~~i~~i~~d~~ 549 (781)
T 3v9f_A 487 TSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQ---------------L-VRKFNQYEGFCSNTINQIYRSSK 549 (781)
T ss_dssp TTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCC---------------E-EEEECTTTTCSCSCEEEEEECTT
T ss_pred CcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCC---------------e-EEEccCCCCCCCCeeEEEEECCC
Confidence 11 1146789999998887554 555344777875322 1 11221 112457899999888
Q ss_pred CCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 295 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 295 ~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
|.+.++. .+|-+..||..+++ +........-....|.++...++|...
T Consensus 550 g~lWi~T-~~Glv~~~d~~~~~-------~~~~~~~~gl~~~~i~~i~~d~~g~lW 597 (781)
T 3v9f_A 550 GQMWLAT-GEGLVCFPSARNFD-------YQVFQRKEGLPNTHIRAISEDKNGNIW 597 (781)
T ss_dssp SCEEEEE-TTEEEEESCTTTCC-------CEEECGGGTCSCCCCCEEEECSSSCEE
T ss_pred CCEEEEE-CCCceEEECCCCCc-------EEEccccCCCCCceEEEEEECCCCCEE
Confidence 8866654 46655889887654 111111111112356777777777644
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.30 E-value=8.7e-05 Score=76.37 Aligned_cols=199 Identities=14% Similarity=0.153 Sum_probs=111.0
Q ss_pred cEEEEEEC-CCCCEEEEEEC-CC----eEEEEECCCC-eEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-----CcEE
Q psy14815 92 TIRETAWS-PCGNFIASASF-DA----TTAVWDKRSG-QFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVW 159 (479)
Q Consensus 92 ~v~~v~~~-~~~~~l~t~~~-dg----~i~iwd~~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~ 159 (479)
.+...+|| |||++|+.+.. +| .|+++|+.++ +.. ...+. .....+.|+||++.|+....+ ..|.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l-~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTI-ADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCC-CCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeC-Ccccc---CceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence 67889999 99998886643 22 5999999988 521 11111 113468899999888877665 2577
Q ss_pred EEEeCCCCceeeeeeee-ccccceeEEEEecCCCEEEEEEc---CCcEEEEecCCcccceEeeeee-cCCCccEEEEEEc
Q psy14815 160 VWEVGEEDEYECAAVIN-AHIQDVKKVRFHPFDNILASASY---DDTVKLFKEDKAEADWINFATL-KSHTSTVWSLAFD 234 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~-~~~~~~v~~~~~~ 234 (479)
.+++.+..... ...+. ........+.|+|+|++|+..+. ...|.++|+.++..... +..+ ........++.|+
T Consensus 251 ~~~lgt~~~~~-~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~-~~~l~~~~~~~~~s~~~~ 328 (751)
T 2xe4_A 251 RHVMGKLQSED-VCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNT-LEIVRPREKGVRYDVQMH 328 (751)
T ss_dssp EEETTSCGGGC-EEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCC-EEESSCCCTTCCEEEEEE
T ss_pred EEECCCCchhc-EEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCce-eEEeecCCCCceEEEeee
Confidence 77876653211 11121 22234567899999998887663 34688889886532110 0222 2233445556554
Q ss_pred cCCCEEE-EeeCC--C--eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEE
Q psy14815 235 RIGSRLA-TCSDD--A--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 309 (479)
Q Consensus 235 ~~~~~l~-s~~~d--g--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~v 309 (479)
. ++.|+ ....+ + .|..+++..+.. +... .+.......+..+.+. .+.++++...++..++
T Consensus 329 ~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~------------~~~~-li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l 393 (751)
T 2xe4_A 329 G-TSHLVILTNEGGAVNHKLLIAPRGQPSD------------WSHV-LVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRI 393 (751)
T ss_dssp T-TTEEEEEECTTTCTTCEEEEEETTSTTC------------CCCE-EECCCSSEEEEEEEEC-SSEEEEEEEETTEEEE
T ss_pred e-CCEEEEEeCCCCCCCcEEEEEcCCCccc------------ceee-EECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEE
Confidence 4 55544 44333 3 555556532211 1110 0111112245556665 3446666777776555
Q ss_pred cc
Q psy14815 310 FK 311 (479)
Q Consensus 310 w~ 311 (479)
|-
T Consensus 394 ~~ 395 (751)
T 2xe4_A 394 WT 395 (751)
T ss_dssp EE
T ss_pred EE
Confidence 43
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=0.0004 Score=68.85 Aligned_cols=236 Identities=14% Similarity=0.097 Sum_probs=134.5
Q ss_pred EEECCCCCe----EEEeeCCCcEEEEecccccccccccCC-----------C--ccceEEEee------cCCcEEEecCC
Q psy14815 17 VSWNPQGTM----ISSCGEDKNIRLWVMVIREPYEKLHGL-----------P--VETSLRQLV------EDKNIRLWGKE 73 (479)
Q Consensus 17 l~~s~~~~~----l~t~~~dg~v~iwd~~~~~~~~~~~~~-----------~--~~~~~~~~~------~~~~i~~w~~~ 73 (479)
++++|.+.. ++.++.|+.+.-+|..+|+.+-+.... + .+..++... .++.+..+|.+
T Consensus 111 ~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~ 190 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVK 190 (599)
T ss_dssp CEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETT
T ss_pred eEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECC
Confidence 444443444 788888999999999988876543221 1 123333333 26788888888
Q ss_pred CCCCceeeeEEeccc-------------------------------c-CCcE-EEEEECCCCCEEEEEECC---------
Q psy14815 74 SFGNKFTAKAILSDG-------------------------------H-QRTI-RETAWSPCGNFIASASFD--------- 111 (479)
Q Consensus 74 ~~~~~~~~~~~~~~~-------------------------------~-~~~v-~~v~~~~~~~~l~t~~~d--------- 111 (479)
+....+......... + ...+ ..+++.+...+++.+..+
T Consensus 191 TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r 270 (599)
T 1w6s_A 191 TGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMR 270 (599)
T ss_dssp TCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGS
T ss_pred CCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCccc
Confidence 655444433211000 0 0001 134556667777777655
Q ss_pred -------CeEEEEECCCCeEEEeEEEeCCC--------CcEEEEEEc-CCC---CEEEEEeCCCcEEEEEeCCCCceeee
Q psy14815 112 -------ATTAVWDKRSGQFECNATLEGHE--------NEVKSVTWS-KNG---QFLATCSRDKSVWVWEVGEEDEYECA 172 (479)
Q Consensus 112 -------g~i~iwd~~~~~~~~~~~~~~~~--------~~v~~l~~~-~~~---~~l~~~~~dg~i~vwd~~~~~~~~~~ 172 (479)
+.|..+|.++|+..-......|. .++. +... .+| ..++.++.+|.+.++|.++++..-..
T Consensus 271 ~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 349 (599)
T 1w6s_A 271 PGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSAN 349 (599)
T ss_dssp CSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecc
Confidence 38999999999854333333332 1222 2222 467 46777889999999999887533221
Q ss_pred eeee----------ccccce--------------------------eEEEEecCCCEEEEEE------------------
Q psy14815 173 AVIN----------AHIQDV--------------------------KKVRFHPFDNILASAS------------------ 198 (479)
Q Consensus 173 ~~~~----------~~~~~v--------------------------~~l~~~~~~~~l~~~~------------------ 198 (479)
.... ....++ ..++|+|+..++++..
T Consensus 350 ~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~ 429 (599)
T 1w6s_A 350 KLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQ 429 (599)
T ss_dssp ESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTS
T ss_pred cccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCc
Confidence 1000 000111 2456777665554431
Q ss_pred ---------------------cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCC
Q psy14815 199 ---------------------YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 257 (479)
Q Consensus 199 ---------------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 257 (479)
..|.+..||+.+++..|+.........+. ....+..++.++.|+.++.||.+++
T Consensus 430 ~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~-----~~tagg~vf~gt~dg~l~A~D~~tG 504 (599)
T 1w6s_A 430 FFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGT-----MATAGDLVFYGTLDGYLKARDSDTG 504 (599)
T ss_dssp CCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBC-----EEETTTEEEEECTTSEEEEEETTTC
T ss_pred ceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcc-----eEecCCEEEEECCCCeEEEEECCCC
Confidence 34678888888887655443221111111 2224677888999999999998655
Q ss_pred C
Q psy14815 258 G 258 (479)
Q Consensus 258 ~ 258 (479)
+
T Consensus 505 ~ 505 (599)
T 1w6s_A 505 D 505 (599)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=98.22 E-value=0.003 Score=57.43 Aligned_cols=204 Identities=7% Similarity=-0.024 Sum_probs=120.9
Q ss_pred CCcEEEEEECCCCCEEEEE-ECCCeEEEEECCCC---eEEEeEEEeCCCCcEEEEEEcCCCCEEEEE-eCCCcEEEEEeC
Q psy14815 90 QRTIRETAWSPCGNFIASA-SFDATTAVWDKRSG---QFECNATLEGHENEVKSVTWSKNGQFLATC-SRDKSVWVWEVG 164 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~-~~dg~i~iwd~~~~---~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~vwd~~ 164 (479)
...+..++|++.+..|+.+ ...+.|..+++.+. . .....+...-.....+++.+.+..|+.+ ...+.|.++++.
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~-~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~ 107 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS-SYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 107 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC---------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCc-ccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCC
Confidence 4567899999866555554 45689999998761 1 1112233222356789998755555544 567889999987
Q ss_pred CCCceeeeeeeeccccceeEEEEecCCCEEEEEEcC--CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 165 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD--DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 165 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
.... .............++++|.+..|+.+... +.|..+++..... ..+ ....-.....++++++++.|+.
T Consensus 108 g~~~---~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~--~~~--~~~~~~~P~gla~d~~~~~lY~ 180 (316)
T 1ijq_A 108 GVKR---KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--YSL--VTENIQWPNGITLDLLSGRLYW 180 (316)
T ss_dssp SSSE---EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE--EEE--ECSSCSCEEEEEEETTTTEEEE
T ss_pred CCce---EEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe--EEE--EECCCCCceEEEEeccCCEEEE
Confidence 6421 11122223456899999966655555442 6788888764332 111 1122346789999998777765
Q ss_pred ee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 243 CS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 243 ~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+. ..+.|..+|+..... +.+..... .......+++. .+.++++-...+.|..++..+++
T Consensus 181 ~D~~~~~I~~~d~dg~~~-------------~~~~~~~~-~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 181 VDSKLHSISSIDVNGGNR-------------KTILEDEK-RLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp EETTTTEEEEEETTSCSC-------------EEEEECTT-TTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCC
T ss_pred EECCCCeEEEEecCCCce-------------EEEeecCC-ccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCc
Confidence 54 556899999742111 11211111 12345677774 35566666667889888876654
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=98.22 E-value=5.9e-05 Score=76.45 Aligned_cols=233 Identities=12% Similarity=0.031 Sum_probs=125.1
Q ss_pred EEEEECCCCCeEEEeeC-CCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcE
Q psy14815 15 WNVSWNPQGTMISSCGE-DKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 93 (479)
Q Consensus 15 ~~l~~s~~~~~l~t~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v 93 (479)
.++++..++++++.|+. ++.+.+||..+.+-... ... .....-
T Consensus 246 ~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~----------------------------------~~~--~~~R~~ 289 (656)
T 1k3i_A 246 PGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPG----------------------------------PDM--QVARGY 289 (656)
T ss_dssp CEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEEC----------------------------------CCC--SSCCSS
T ss_pred ccccCCCCCCEEEeCCCCCCceEEecCcCCceeEC----------------------------------CCC--Cccccc
Confidence 34667788888888873 45688887765432111 000 011112
Q ss_pred EEEEECCCCCEEEEEE-CC-----CeEEEEECCCCeEEEeE-----EEeCCCCcEEEEEEcCCCCEEEEEeCCC------
Q psy14815 94 RETAWSPCGNFIASAS-FD-----ATTAVWDKRSGQFECNA-----TLEGHENEVKSVTWSKNGQFLATCSRDK------ 156 (479)
Q Consensus 94 ~~v~~~~~~~~l~t~~-~d-----g~i~iwd~~~~~~~~~~-----~~~~~~~~v~~l~~~~~~~~l~~~~~dg------ 156 (479)
.+++..++++.++.|+ .+ ..+.+||..++++..+. .+..... ...+..++..++.|+.+|
T Consensus 290 ~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~---~~~~~~~~~iyv~Gg~~g~~~~~~ 366 (656)
T 1k3i_A 290 QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADK---QGLYRSDNHAWLFGWKKGSVFQAG 366 (656)
T ss_dssp CEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCT---TGGGTTTCSCCEEECGGGCEEECC
T ss_pred cceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccc---cceeecCCceEEEECCCCcEEEec
Confidence 3345567888888888 34 57999999998765431 0110000 011223455555554443
Q ss_pred ---cEEEEEeCCCCceeeeeeeec------cccceeEEEEec-CCCEEEEEEcCC-----------cEEEEecCCcccce
Q psy14815 157 ---SVWVWEVGEEDEYECAAVINA------HIQDVKKVRFHP-FDNILASASYDD-----------TVKLFKEDKAEADW 215 (479)
Q Consensus 157 ---~i~vwd~~~~~~~~~~~~~~~------~~~~v~~l~~~~-~~~~l~~~~~dg-----------~i~i~d~~~~~~~~ 215 (479)
.+..||..+..-......... ....-.++.|.. +++++++|+.++ .|.+||..+.. |
T Consensus 367 ~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~--W 444 (656)
T 1k3i_A 367 PSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSP--N 444 (656)
T ss_dssp SSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCC--E
T ss_pred CccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCC--e
Confidence 567888877642222111111 011234455544 678888888543 57778776543 2
Q ss_pred Eeee--eecCCCccEEEEEEccCCCEEEEeeCC-----------CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccc
Q psy14815 216 INFA--TLKSHTSTVWSLAFDRIGSRLATCSDD-----------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH 282 (479)
Q Consensus 216 ~~~~--~~~~~~~~v~~~~~~~~~~~l~s~~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (479)
..+. .+. ....-.+++..|+++.++.|+.+ ..+.+||.... .|..+..+...
T Consensus 445 ~~~~~~~mp-~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~-------------~W~~~~~~~~~- 509 (656)
T 1k3i_A 445 TVFASNGLY-FARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD-------------TFYKQNPNSIV- 509 (656)
T ss_dssp EEECTTCCS-SCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT-------------EEEECCCCSSC-
T ss_pred eEEccCCCC-CCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC-------------ceeecCCCCCc-
Confidence 3222 111 11122345567889999998854 46788987432 23322222211
Q ss_pred cccEEEEEecCCCCeEEEEeC
Q psy14815 283 GRTIYDISWCHLTDLIATACG 303 (479)
Q Consensus 283 ~~~i~~l~~~~~~~~l~~~~~ 303 (479)
........+.|++++++.|+.
T Consensus 510 R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 510 RVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCTTEEEEECTTSCEEEEECC
T ss_pred cccccHhhcCCCcEEEecCCC
Confidence 112234456789999999885
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=98.20 E-value=0.0034 Score=57.33 Aligned_cols=272 Identities=9% Similarity=0.078 Sum_probs=139.5
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC---Cc---------cceEEEeecCCcEEEecCCCCCCc
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL---PV---------ETSLRQLVEDKNIRLWGKESFGNK 78 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~---~~---------~~~~~~~~~~~~i~~w~~~~~~~~ 78 (479)
...+.+|.|.+++..+++ +.+|.| +.....++.-..+... +. ...+..+...+.+ +...+.+..
T Consensus 35 ~~~~~~v~~~~~~~~~~~-G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~g~i--~~S~DgG~t 110 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLV-GVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPIM--LHTTDGGQS 110 (327)
T ss_dssp SSCEEEEEESSSSCEEEE-ETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEETTEE--EEESSTTSS
T ss_pred CCcEEEEEECCCCcEEEE-cCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECCCeE--EEECCCCCC
Confidence 457999999887777774 456654 2222223221111110 00 1122233333322 223333444
Q ss_pred eeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCC-eEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc
Q psy14815 79 FTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG-QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 157 (479)
Q Consensus 79 ~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~ 157 (479)
+...... ..+...+..+.+.+++..++.+ .+|.|.. ....+ .+... .......+..+.+.+++.+++++ .+|.
T Consensus 111 W~~~~~~-~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~--~~~~~~~~~~~~~~~~~~~~~~g-~~G~ 184 (327)
T 2xbg_A 111 WSQIPLD-PKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQAL--VQEAIGVMRNLNRSPSGEYVAVS-SRGS 184 (327)
T ss_dssp CEECCCC-TTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEE--ECSCCCCEEEEEECTTSCEEEEE-TTSS
T ss_pred ceECccc-cCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEe--ecCCCcceEEEEEcCCCcEEEEE-CCCc
Confidence 4433211 1233457778877666655554 4565432 22223 23322 23455678999999988877666 4555
Q ss_pred EEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeee-cCCCccEEEEEEccC
Q psy14815 158 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL-KSHTSTVWSLAFDRI 236 (479)
Q Consensus 158 i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~ 236 (479)
+..-+-..+..+..+. ......+..+.+.++++.+ .++.+|.+++.+.+.+. .|..+..- ......+.++.+.++
T Consensus 185 ~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~-tW~~~~~~~~~~~~~~~~v~~~~~ 260 (327)
T 2xbg_A 185 FYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSE-NWGELLSPLRRNSVGFLDLAYRTP 260 (327)
T ss_dssp EEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEE-EECCCBCTTSSCCSCEEEEEESSS
T ss_pred EEEEeCCCCCceeECC--CCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCC-eeEeccCCcccCCcceEEEEecCC
Confidence 5443211133334332 2334568889999888755 55567887776433222 23222211 112345889999987
Q ss_pred CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 237 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 237 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
+..++++ .+|.| ++....+ .+|..+...... ...+.++.|.+++. +++++.+|.|.-++-
T Consensus 261 ~~~~~~g-~~g~i-~~S~DgG------------~tW~~~~~~~~~-~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 261 NEVWLAG-GAGAL-LCSQDGG------------QTWQQDVDVKKV-PSNFYKILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp SCEEEEE-STTCE-EEESSTT------------SSCEECGGGTTS-SSCCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred CEEEEEe-CCCeE-EEeCCCC------------cccEEcCccCCC-CCCeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence 7766655 46766 3333222 233322111111 24577888876555 555667888766653
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=98.18 E-value=0.0047 Score=58.16 Aligned_cols=232 Identities=7% Similarity=-0.020 Sum_probs=136.8
Q ss_pred eEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEE-ECCCeEEEEECCCCe--EEEeEEEeCC
Q psy14815 57 SLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASA-SFDATTAVWDKRSGQ--FECNATLEGH 133 (479)
Q Consensus 57 ~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~-~~dg~i~iwd~~~~~--~~~~~~~~~~ 133 (479)
..+.+.....|+..+++... .... ......+..++|++.+..|+.+ ...+.|..+++.... ......+...
T Consensus 84 ~~ll~~~~~~I~~i~l~~~~--~~~~----~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~ 157 (400)
T 3p5b_L 84 AYLFFTNRHEVRKMTLDRSE--YTSL----IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD 157 (400)
T ss_dssp CEEEEEETTEEEEECTTSCS--CEEE----ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSS
T ss_pred ceeEEeccceeEEEccCCcc--eeEe----ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC
Confidence 35556667788888887322 1111 2345678899999866666555 456789999987521 0112233333
Q ss_pred CCcEEEEEEcCCCCEEEE-EeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc--CCcEEEEecCC
Q psy14815 134 ENEVKSVTWSKNGQFLAT-CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY--DDTVKLFKEDK 210 (479)
Q Consensus 134 ~~~v~~l~~~~~~~~l~~-~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--dg~i~i~d~~~ 210 (479)
......+++.+.+..|+. -...+.|.+.++..... ...+.......+.++++|.+..|+.... .+.|...++..
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~---~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG 234 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR---KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 234 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSE---EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCce---EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC
Confidence 456788999885444544 45577899888876531 2222223344789999996666655542 37888888875
Q ss_pred cccceEeeeeecCCCccEEEEEEccCCCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEE
Q psy14815 211 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI 289 (479)
Q Consensus 211 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 289 (479)
... .......-.....|++++++..|+.+. ..+.|..+|+..... ..+...... -.....+
T Consensus 235 ~~~----~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~-------------~~~~~~~~~-l~~P~gl 296 (400)
T 3p5b_L 235 VDI----YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-------------KTILEDEKR-LAHPFSL 296 (400)
T ss_dssp CSC----EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC-------------EEEEECSST-TSSEEEE
T ss_pred Ccc----EEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc-------------EEEEeCCCC-CCCCEEE
Confidence 442 111222335678999998887776664 456788888743211 111111111 2344566
Q ss_pred EecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 290 SWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 290 ~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
++. .+.++.+-...+.|..++..+++
T Consensus 297 ~v~-~~~lywtd~~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 297 AVF-EDKVFWTDIINEAIFSANRLTGS 322 (400)
T ss_dssp EEE-TTEEEEEESSSCSEEEEESSSCC
T ss_pred EEe-CCEEEEecCCCCeEEEEEcCCCC
Confidence 663 34455566667888888866665
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.17 E-value=0.0025 Score=59.81 Aligned_cols=227 Identities=9% Similarity=0.008 Sum_probs=132.9
Q ss_pred EEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEE-ECCCeEEEEECCCCeEEEeEEEeCCCCc
Q psy14815 58 LRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASA-SFDATTAVWDKRSGQFECNATLEGHENE 136 (479)
Q Consensus 58 ~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 136 (479)
.+.++....|+..++... .... . ......+..++|.+.+..|+.+ ...+.|..+++..+... ..+......
T Consensus 89 ~l~~~~~~~I~~i~~~~~--~~~~--~--~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~--~~~~~~~~~ 160 (386)
T 3v65_B 89 VLLFANRIDIRQVLPHRS--EYTL--L--LNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE--EVVSTGLES 160 (386)
T ss_dssp EEEEECBSCEEEECTTSC--CCEE--E--ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEE--EEECSSCSC
T ss_pred eeEeecCccceeeccCCC--cEEE--E--ecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcE--EEEeCCCCC
Confidence 344455567777777632 1111 1 1234568899999865555544 45689999999876522 222222234
Q ss_pred EEEEEEcCCCCEEEEE-eCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEE-cC-CcEEEEecCCccc
Q psy14815 137 VKSVTWSKNGQFLATC-SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-YD-DTVKLFKEDKAEA 213 (479)
Q Consensus 137 v~~l~~~~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~d-g~i~i~d~~~~~~ 213 (479)
...+++.+.+..|+.+ ...+.|.+.++..... .............++++|.+..|.... .. +.|..++++....
T Consensus 161 p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~---~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 237 (386)
T 3v65_B 161 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR---KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR 237 (386)
T ss_dssp CCCEEEETTTTEEEEEETTTTEEEECBTTSCSC---EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred ccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce---EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc
Confidence 5678888755555444 4567788888765421 112222234568899998666555554 34 6788888875432
Q ss_pred ceEeeeeecCCCccEEEEEEccCCCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec
Q psy14815 214 DWINFATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 292 (479)
Q Consensus 214 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 292 (479)
.......-.....++++|++..|+.+. ..+.|..+|+..... . ..+... ......+++
T Consensus 238 ----~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~-------------~--~~~~~~-~~~P~giav- 296 (386)
T 3v65_B 238 ----RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-------------K--AVISQG-LPHPFAITV- 296 (386)
T ss_dssp ----EEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC-------------E--EEECSS-CSSEEEEEE-
T ss_pred ----EEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee-------------E--EEEECC-CCCceEEEE-
Confidence 111122334578999998777665554 557788888642211 1 111111 334567777
Q ss_pred CCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 293 HLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 293 ~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
..+.++.+-...+.|..++..+++
T Consensus 297 ~~~~ly~td~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 297 FEDSLYWTDWHTKSINSANKFTGK 320 (386)
T ss_dssp ETTEEEEEETTTTEEEEEETTTCC
T ss_pred ECCEEEEeeCCCCeEEEEECCCCc
Confidence 345566666667888888855554
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=98.06 E-value=0.0038 Score=56.49 Aligned_cols=197 Identities=11% Similarity=0.149 Sum_probs=120.8
Q ss_pred CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCC----CC---EEEEEeC---CCcEEEEEeCC-CCce
Q psy14815 101 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN----GQ---FLATCSR---DKSVWVWEVGE-EDEY 169 (479)
Q Consensus 101 ~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~----~~---~l~~~~~---dg~i~vwd~~~-~~~~ 169 (479)
...+++....++-+.+||+ +|+ .+..+.. +.+..+..-|+ |+ ++++... +++|.+|++.. ...+
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~--~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l 113 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGK--MLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL 113 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSC--EEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCE
T ss_pred CccEEEEEcCCCCEEEEcC-CCc--EEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCce
Confidence 3466777777889999999 565 4455543 55677766652 22 2333333 47899998852 2122
Q ss_pred eeeeee----eccccceeEEEE--ecC-CC-EEEEEEcCCcEEEEecC---CcccceEeeeeecCCCccEEEEEEccCCC
Q psy14815 170 ECAAVI----NAHIQDVKKVRF--HPF-DN-ILASASYDDTVKLFKED---KAEADWINFATLKSHTSTVWSLAFDRIGS 238 (479)
Q Consensus 170 ~~~~~~----~~~~~~v~~l~~--~~~-~~-~l~~~~~dg~i~i~d~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 238 (479)
..+... ......+..+|+ +|. +. ++++...+|.+..|++. .+....+.++++.. .+.+-.+...+...
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g 192 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYG 192 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTT
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCC
Confidence 222111 011145666777 664 43 67888889999999884 33334455666654 45788999999889
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEe-ccccccEEEEEe--cCCCC-eEEEEe-CCCeEEEcccC
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHGRTIYDISW--CHLTD-LIATAC-GDDAIRIFKEN 313 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~l~~--~~~~~-~l~~~~-~dg~i~vw~~~ 313 (479)
.|+.+-++..|..++...... ...+.+..+. ++-...+..|++ .++++ ||++++ .+++..+||.+
T Consensus 193 ~Lyv~eEd~GIw~~da~p~~~----------~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 193 RLYIAEEDEAIWKFSAEPDGG----------SNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEEETTTEEEEEECSTTSC----------SCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred eEEEecccceEEEEeCCcCCC----------CCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 999999986655555322211 1224444442 222346888888 45555 555555 67899999986
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=98.03 E-value=0.0073 Score=54.83 Aligned_cols=201 Identities=9% Similarity=-0.001 Sum_probs=120.2
Q ss_pred CcEEEEEECCCCCEE-EEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEE-EEeCCCcEEEEEeCCCCc
Q psy14815 91 RTIRETAWSPCGNFI-ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l-~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~i~vwd~~~~~~ 168 (479)
..+..++|.+.+..| .+-...+.|..+++..+... ...+...-.....+++.+.+..|+ +-...+.|.++++.....
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~-~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~ 113 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV-QNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 113 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCC-CEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCce-EEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE
Confidence 356789999855555 44455688999998766311 111222223466888887555444 445567899999876421
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEEE--cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee-C
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASAS--YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS-D 245 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~ 245 (479)
. ............+++.|.+..|+.+. ..+.|..++++.... ..+ ....-.....+++++++..|+.+. .
T Consensus 114 -~--~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~--~~~--~~~~l~~Pnglavd~~~~~lY~aD~~ 186 (318)
T 3sov_A 114 -K--VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR--FII--INSEIYWPNGLTLDYEEQKLYWADAK 186 (318)
T ss_dssp -E--EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC--EEE--ECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred -E--EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe--EEE--EECCCCCccEEEEeccCCEEEEEECC
Confidence 1 11222334568999999766665555 257888888874332 111 122234568999999777666554 5
Q ss_pred CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 246 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 246 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
.+.|..+|+..... +.+ ..+. ......+++.. +.++.+-...+.|..++..+++
T Consensus 187 ~~~I~~~d~dG~~~-------------~~~--~~~~-~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 187 LNFIHKSNLDGTNR-------------QAV--VKGS-LPHPFALTLFE-DILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp TTEEEEEETTSCSC-------------EEE--ECSC-CSCEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred CCEEEEEcCCCCce-------------EEE--ecCC-CCCceEEEEeC-CEEEEEecCCCeEEEEECCCCC
Confidence 67888888743211 111 1111 33456677753 3455555667889888886665
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=98.00 E-value=0.0018 Score=59.23 Aligned_cols=158 Identities=9% Similarity=0.181 Sum_probs=92.6
Q ss_pred ccCCcEEEEEECCCCCEEEEEECCCeEEE-EECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCC
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFDATTAV-WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 166 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~dg~i~i-wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~ 166 (479)
.....+..+.+.+++.+++.+. +|.+.. +|-....+... -......+..+.+.+++..+ .++.+|.+++.+...+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~gG~tW~~~--~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G 235 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEPGQTAWEPH--NRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNS 235 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEET-TSSEEEEECTTCSSCEEE--ECCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEE
T ss_pred CCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCCCCCceeEC--CCCCCCccceeEECCCCCEE-EEeCCceEEEecCCCC
Confidence 3456789999999888777664 454443 34212233222 12345678899999988755 5556788777643323
Q ss_pred Cceeeeeee-eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeC
Q psy14815 167 DEYECAAVI-NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 245 (479)
Q Consensus 167 ~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 245 (479)
..+..+..- ......+.++.+.+++..++++ .+|.+ ++..+.+. .|..+.........+.++.|.+++ .+++++.
T Consensus 236 ~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~i-~~S~DgG~-tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~ 311 (327)
T 2xbg_A 236 ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGAL-LCSQDGGQ-TWQQDVDVKKVPSNFYKILFFSPD-QGFILGQ 311 (327)
T ss_dssp EEECCCBCTTSSCCSCEEEEEESSSSCEEEEE-STTCE-EEESSTTS-SCEECGGGTTSSSCCCEEEEEETT-EEEEECS
T ss_pred CeeEeccCCcccCCcceEEEEecCCCEEEEEe-CCCeE-EEeCCCCc-ccEEcCccCCCCCCeEEEEEECCC-ceEEEcC
Confidence 322222111 0122357889998877766654 46766 44444443 454443222334567888887544 4666778
Q ss_pred CCeEEEEe
Q psy14815 246 DATVKIWK 253 (479)
Q Consensus 246 dg~i~iwd 253 (479)
+|.|.-++
T Consensus 312 ~G~i~~~~ 319 (327)
T 2xbg_A 312 KGILLRYV 319 (327)
T ss_dssp TTEEEEEC
T ss_pred CceEEEEc
Confidence 89877665
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=97.96 E-value=0.01 Score=53.89 Aligned_cols=158 Identities=9% Similarity=-0.040 Sum_probs=96.1
Q ss_pred cEEEEEECCCCCEE-EEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC--CcEEEEEeCCCCc
Q psy14815 92 TIRETAWSPCGNFI-ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD--KSVWVWEVGEEDE 168 (479)
Q Consensus 92 ~v~~v~~~~~~~~l-~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d--g~i~vwd~~~~~~ 168 (479)
....+++.+.+..| ++-...+.|.+.++...... ..+.........+++.|.+..|+.+... +.|..+++.....
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~--~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~ 155 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK--TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 155 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEE--EEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceE--EEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe
Confidence 45678888655444 45456789999998765422 2233334567899999976666665543 6788888765421
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCC
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 247 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 247 (479)
..+ ....-...+.++++|++..|..+. ..+.|..+|+..... ..+............+++. .+..+++-...+
T Consensus 156 -~~~--~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~--~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~ 229 (316)
T 1ijq_A 156 -YSL--VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR--KTILEDEKRLAHPFSLAVF-EDKVFWTDIINE 229 (316)
T ss_dssp -EEE--ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEEECTTTTSSEEEEEEE-TTEEEEEETTTT
T ss_pred -EEE--EECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCce--EEEeecCCccCCcEEEEEE-CCEEEEEECCCC
Confidence 111 112234567899998766665554 567899999875332 2222221222345677775 344555555677
Q ss_pred eEEEEeccCC
Q psy14815 248 TVKIWKEYKP 257 (479)
Q Consensus 248 ~i~iwd~~~~ 257 (479)
.|..++...+
T Consensus 230 ~V~~~~~~~g 239 (316)
T 1ijq_A 230 AIFSANRLTG 239 (316)
T ss_dssp EEEEEETTTC
T ss_pred eEEEEeCCCC
Confidence 8888886443
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.93 E-value=0.01 Score=56.89 Aligned_cols=208 Identities=12% Similarity=0.080 Sum_probs=115.5
Q ss_pred CCcEEEEEE-------CCCCCEEEEEECCC-------eEEEEECCC-CeEEE---eEEEeCCCCcEEEEEEcCC-CCEEE
Q psy14815 90 QRTIRETAW-------SPCGNFIASASFDA-------TTAVWDKRS-GQFEC---NATLEGHENEVKSVTWSKN-GQFLA 150 (479)
Q Consensus 90 ~~~v~~v~~-------~~~~~~l~t~~~dg-------~i~iwd~~~-~~~~~---~~~~~~~~~~v~~l~~~~~-~~~l~ 150 (479)
......++| +++++.|+.+...+ .|.+.+... +.+.. ...+... .....++++|+ +.+++
T Consensus 185 ~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYv 263 (496)
T 3kya_A 185 TNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYF 263 (496)
T ss_dssp CSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEE
T ss_pred cCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEE
Confidence 346889999 99998777766554 266665443 22210 0111111 23457788995 45555
Q ss_pred EEeCCCcEEEEEeC-------CCCce-----------eeeeeeeccccceeEEEEecCCCEEEEE-EcCCcEEEEecCCc
Q psy14815 151 TCSRDKSVWVWEVG-------EEDEY-----------ECAAVINAHIQDVKKVRFHPFDNILASA-SYDDTVKLFKEDKA 211 (479)
Q Consensus 151 ~~~~dg~i~vwd~~-------~~~~~-----------~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~i~d~~~~ 211 (479)
+-..++.|..+|+. ++..+ ..+... ......+.++|+|+++.|..+ +....|+.++....
T Consensus 264 td~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~ 342 (496)
T 3kya_A 264 NSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEI 342 (496)
T ss_dssp EETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred EECCCCEEEEEecccccccccCceeecccccccccccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCC
Confidence 55667889999997 44320 111111 122345789999999964444 46678888765432
Q ss_pred ccce---Eeeeee---cCC---------CccEE-EEEEc-------cCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCC
Q psy14815 212 EADW---INFATL---KSH---------TSTVW-SLAFD-------RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDN 268 (479)
Q Consensus 212 ~~~~---~~~~~~---~~~---------~~~v~-~~~~~-------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 268 (479)
.... ..+.-. .+. -.... .++.. +++.++++-.....|+.++. .+ .
T Consensus 343 ~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G-~--------- 411 (496)
T 3kya_A 343 KKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EG-I--------- 411 (496)
T ss_dssp TTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TC-B---------
T ss_pred cceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC-CC-C---------
Confidence 2100 011110 010 11233 44444 44555555566778888873 11 1
Q ss_pred CCceEEEEEEecc-----------------------ccccEEEEEecCC-CCeEEEEeCCCeEEEcccCCCC
Q psy14815 269 DSVWKCVCTLSGH-----------------------HGRTIYDISWCHL-TDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 269 ~~~~~~~~~~~~~-----------------------~~~~i~~l~~~~~-~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+.++.+. .-.....|+++++ +.++++=..+..|+.++++...
T Consensus 412 ------v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~ 477 (496)
T 3kya_A 412 ------VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEE 477 (496)
T ss_dssp ------EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC
T ss_pred ------EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCc
Confidence 1122111 1124678999986 7666666677889999887654
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=97.92 E-value=0.0018 Score=58.08 Aligned_cols=214 Identities=8% Similarity=0.020 Sum_probs=122.9
Q ss_pred cccccceEEEEECCCCCeEEEee-CCCcEEEEeccccccccc-ccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 8 KGHQGRVWNVSWNPQGTMISSCG-EDKNIRLWVMVIREPYEK-LHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 8 ~~h~~~V~~l~~s~~~~~l~t~~-~dg~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
.....--.+++|.+....|..++ ..++|..||...+..... +... ...
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~--------------------s~~---------- 58 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGA--------------------SSN---------- 58 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTT--------------------CCS----------
T ss_pred cCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCc--------------------ccc----------
Confidence 33444456789988655665555 789999998754322111 1000 000
Q ss_pred ccccCCcEEEEEE---CCCCCEEEEEE-------------CCCeEEEEECC---CCeEEEeEEEeCC-----------CC
Q psy14815 86 SDGHQRTIRETAW---SPCGNFIASAS-------------FDATTAVWDKR---SGQFECNATLEGH-----------EN 135 (479)
Q Consensus 86 ~~~~~~~v~~v~~---~~~~~~l~t~~-------------~dg~i~iwd~~---~~~~~~~~~~~~~-----------~~ 135 (479)
......+..+.| .|+++++++.. .+..|..+|+. +++......+... ..
T Consensus 59 -g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~ 137 (334)
T 2p9w_A 59 -GDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPF 137 (334)
T ss_dssp -SCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCE
T ss_pred -CCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCcccccccccccccccc
Confidence 001123578899 58877776543 25789999998 7764333343221 12
Q ss_pred cEEEEEEcCCCCEEEEEeCC-CcEEEEEeCCCCceeeee-ee--eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCc
Q psy14815 136 EVKSVTWSKNGQFLATCSRD-KSVWVWEVGEEDEYECAA-VI--NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 211 (479)
Q Consensus 136 ~v~~l~~~~~~~~l~~~~~d-g~i~vwd~~~~~~~~~~~-~~--~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~ 211 (479)
....++..++|+..++++.. +.|...+..... ..... .. .......+.|+++|+++.|++....|.+..+|+...
T Consensus 138 ~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~-~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 138 GVVQSAQDRDGNSYVAFALGMPAIARVSADGKT-VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEEEEEECTTSCEEEEEEESSCEEEEECTTSCC-EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred CCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE-EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 47899999999988888887 776666655431 11111 01 111223678999999998888877999999998843
Q ss_pred ccceEeeeeecC---CCccEEE-EEEccCCCE-EEEeeCCCeEEEEec
Q psy14815 212 EADWINFATLKS---HTSTVWS-LAFDRIGSR-LATCSDDATVKIWKE 254 (479)
Q Consensus 212 ~~~~~~~~~~~~---~~~~v~~-~~~~~~~~~-l~s~~~dg~i~iwd~ 254 (479)
......+. ..+ .-..... +.-..+|+. +++.+..+.+.+.+.
T Consensus 217 v~~~v~~~-~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~ 263 (334)
T 2p9w_A 217 YAWPEPVK-INGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSW 263 (334)
T ss_dssp SCCCEECE-ESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECS
T ss_pred cceeeccc-ccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECC
Confidence 21001111 001 1112333 333346777 455555665555553
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.91 E-value=0.011 Score=54.49 Aligned_cols=156 Identities=6% Similarity=-0.064 Sum_probs=93.5
Q ss_pred CcEEEEEECCCCCEE-EEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-C-CcEEEEEeCCCC
Q psy14815 91 RTIRETAWSPCGNFI-ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-D-KSVWVWEVGEED 167 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l-~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-d-g~i~vwd~~~~~ 167 (479)
.....+++.+.+..| ++-...+.|.+.++..... ...+...-.....+++.|.+..|+.... . +.|..+++....
T Consensus 116 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~--~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~ 193 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR--KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG 193 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce--EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC
Confidence 345678888755444 5555568999999876531 2223333456789999996666655544 4 678888877642
Q ss_pred ceeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCC
Q psy14815 168 EYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD 246 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 246 (479)
... .....-...+.++++|++..|..+. ..+.|..+|+..... . ..+.........+++. .+..+++-...
T Consensus 194 ~~~---~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~--~--~~~~~~~~~P~giav~-~~~ly~td~~~ 265 (349)
T 3v64_C 194 RRI---IADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR--K--AVISQGLPHPFAITVF-EDSLYWTDWHT 265 (349)
T ss_dssp CEE---SCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--E--EEECSSCSSEEEEEEE-TTEEEEEETTT
T ss_pred cEE---EEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce--E--EEEeCCCCCceEEEEE-CCEEEEecCCC
Confidence 211 1112233467899998666555554 567899999875432 1 1122223445677773 34444555566
Q ss_pred CeEEEEeccC
Q psy14815 247 ATVKIWKEYK 256 (479)
Q Consensus 247 g~i~iwd~~~ 256 (479)
+.|..++...
T Consensus 266 ~~V~~~~~~~ 275 (349)
T 3v64_C 266 KSINSANKFT 275 (349)
T ss_dssp TEEEEEETTT
T ss_pred CeEEEEEccC
Confidence 7787777433
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=97.89 E-value=0.0031 Score=60.06 Aligned_cols=205 Identities=8% Similarity=0.069 Sum_probs=117.4
Q ss_pred CcEEEEEECCC--CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC----c-EEEEEe
Q psy14815 91 RTIRETAWSPC--GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK----S-VWVWEV 163 (479)
Q Consensus 91 ~~v~~v~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg----~-i~vwd~ 163 (479)
.....++|+|+ ...|+.+...+.|+.+|..+++. ..+.........++++++++ |+++...+ . +..++.
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v---~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYV---DIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEE---EEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECG
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEE---EEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEEC
Confidence 45678999984 45566665548999999988853 23333445689999999999 55554422 1 333332
Q ss_pred CCCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
.... .....+. .......++++| ++.+.++-..++.|+.+|..++.... .+..... ...-..++|+|++++|+.
T Consensus 215 ~~~~--~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~-~~~~~~~-~~~~~~ia~dpdG~~LYv 289 (433)
T 4hw6_A 215 ASGF--TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTE-EEVMMDT-KGSNFHIVWHPTGDWAYI 289 (433)
T ss_dssp GGTT--CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEE-EEEECSC-CSSCEEEEECTTSSEEEE
T ss_pred CCCe--ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEE-EEeccCC-CCCcccEEEeCCCCEEEE
Confidence 2211 1001111 223456788999 67766666677889999987554211 1111111 222346999999996554
Q ss_pred e-eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEE-----------eccccccEEEEEe---------cCCCCeEEEE
Q psy14815 243 C-SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL-----------SGHHGRTIYDISW---------CHLTDLIATA 301 (479)
Q Consensus 243 ~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~i~~l~~---------~~~~~~l~~~ 301 (479)
+ ...+.|+.++......... ....+.-. ....-.....+++ .+++.++++-
T Consensus 290 ad~~~~~I~~~~~d~~~~~~~--------~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD 361 (433)
T 4hw6_A 290 IYNGKHCIYRVDYNRETGKLA--------VPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCD 361 (433)
T ss_dssp EETTTTEEEEEEBCTTTCCBC--------CCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEE
T ss_pred EeCCCCEEEEEeCCCCCcccC--------cEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEE
Confidence 4 4567899988653211100 00000000 0001224567888 6677777776
Q ss_pred eCCCeEEEccc
Q psy14815 302 CGDDAIRIFKE 312 (479)
Q Consensus 302 ~~dg~i~vw~~ 312 (479)
...+.|+.++.
T Consensus 362 ~~n~~I~~~~~ 372 (433)
T 4hw6_A 362 RDSHTVRVLTP 372 (433)
T ss_dssp TTTTEEEEECT
T ss_pred CCCCEEEEECC
Confidence 66788888874
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=0.015 Score=53.62 Aligned_cols=241 Identities=9% Similarity=0.057 Sum_probs=122.2
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR 91 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 91 (479)
.....|+|.|+|+++++ ..+|.|++++ .+++ ..+... . .......
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~--~~~~~~------------------------------~-v~~~g~~ 73 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGK--KLVASF------------------------------D-VANVGEA 73 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCE--EEEEEC------------------------------C-CCCSTTC
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCc--eEeecc------------------------------c-eeecCCC
Confidence 45688999999975554 4568888886 2222 111000 0 0011234
Q ss_pred cEEEEEECCC---CCEEEEEEC----C----CeEEEEECCCC--e---EEEe-EEEeC-CCCcEEEEEEcCCCCEEEEEe
Q psy14815 92 TIRETAWSPC---GNFIASASF----D----ATTAVWDKRSG--Q---FECN-ATLEG-HENEVKSVTWSKNGQFLATCS 153 (479)
Q Consensus 92 ~v~~v~~~~~---~~~l~t~~~----d----g~i~iwd~~~~--~---~~~~-~~~~~-~~~~v~~l~~~~~~~~l~~~~ 153 (479)
....|+++|+ +..|+.+.. + +.|..|+...+ . .+.+ ..+.. .......+.|.|||.+.++.+
T Consensus 74 g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 74 GLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp SEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred ceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 6788999997 445544433 3 56777876654 1 1111 12321 112346799999998666543
Q ss_pred C-------------CCcEEEEEeCCCC----ceeeeeee-eccccceeEEEEec-CCCEEEEEEcCC---cEEEEecCCc
Q psy14815 154 R-------------DKSVWVWEVGEED----EYECAAVI-NAHIQDVKKVRFHP-FDNILASASYDD---TVKLFKEDKA 211 (479)
Q Consensus 154 ~-------------dg~i~vwd~~~~~----~~~~~~~~-~~~~~~v~~l~~~~-~~~~l~~~~~dg---~i~i~d~~~~ 211 (479)
. .|.|..++....- .......+ .++ .....++|+| +++++++-.... .|.+.. .+
T Consensus 154 ~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G 230 (354)
T 3a9g_A 154 DAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KG 230 (354)
T ss_dssp CTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TT
T ss_pred CCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEec--CC
Confidence 2 1345544443210 00000111 122 2346899999 566554432221 233332 11
Q ss_pred cc-------------c-eEeeeeecCCCccEEEEEEc-------cCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCC
Q psy14815 212 EA-------------D-WINFATLKSHTSTVWSLAFD-------RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDS 270 (479)
Q Consensus 212 ~~-------------~-~~~~~~~~~~~~~v~~~~~~-------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 270 (479)
.. . ..++..+.........++|. .+|.++++.-..+.|...++......
T Consensus 231 ~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~---------- 300 (354)
T 3a9g_A 231 GNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEV---------- 300 (354)
T ss_dssp CBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCE----------
T ss_pred CcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcc----------
Confidence 10 0 01222231123456788883 46666666656677877776432110
Q ss_pred ceEEEEEEeccccccEEEEEecCCCCeEEEEe
Q psy14815 271 VWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 271 ~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~ 302 (479)
.....+.......+..+++.|||.++++..
T Consensus 301 --~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 301 --RKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp --EEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred --cceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 111222211145788999999998766654
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=97.81 E-value=0.022 Score=52.85 Aligned_cols=230 Identities=11% Similarity=0.115 Sum_probs=141.5
Q ss_pred EEECCCCCeEEEeeCCCcEEEEecccccccccccCCCc-------cceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 17 VSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPV-------ETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 17 l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~-------~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
.-.+|..+.||.=. ..++.|+|+++.+.++.+.-..+ +...+....+..+.-|+++....+.........-.
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~ 149 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLA 149 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEEEECSSEEEEEESSSSCCCEEEEECCGGGT
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCCeEEEEcCCeeEEecccCCCCchhheecchhcc
Confidence 44567777777654 67899999999998887765432 34455666788899999975333322222222223
Q ss_pred CCcEEEEEECCCCCEEEEEEC-------CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCC---CEEEEEeCC---C
Q psy14815 90 QRTIRETAWSPCGNFIASASF-------DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG---QFLATCSRD---K 156 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~---~~l~~~~~d---g 156 (479)
...|..-..+++.++++..+- .|.+.+|..+.+ ..+.+++|......+....+. ..++.+... +
T Consensus 150 ~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~---~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~ 226 (494)
T 1bpo_A 150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK---VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGG 226 (494)
T ss_dssp TCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC---CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCC
T ss_pred cceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc---ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCc
Confidence 567888888999998875542 478999999887 456778886554444433211 234444332 7
Q ss_pred cEEEEEeCCC--Cc--e--eeeeeee---ccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCcc
Q psy14815 157 SVWVWEVGEE--DE--Y--ECAAVIN---AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST 227 (479)
Q Consensus 157 ~i~vwd~~~~--~~--~--~~~~~~~---~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 227 (479)
.+++-++... .. . +....+. ...+-.-++..++.-..+..-+.-|.+.+||+.++.. +..-+-....
T Consensus 227 kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~----i~~nrIs~~~ 302 (494)
T 1bpo_A 227 KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC----IYMNRISGET 302 (494)
T ss_dssp EEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCE----EEEEECCSSC
T ss_pred EEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEeccccee----eeeecccCCc
Confidence 8999998643 10 0 1111111 1122345788888778888999999999999998875 3333334444
Q ss_pred EEEEEEccCCCEEEEeeCCCeEEEEec
Q psy14815 228 VWSLAFDRIGSRLATCSDDATVKIWKE 254 (479)
Q Consensus 228 v~~~~~~~~~~~l~s~~~dg~i~iwd~ 254 (479)
|..-+.+....-++.....|.|.--.+
T Consensus 303 iF~t~~~~~~~Gi~~Vnr~GqVl~v~v 329 (494)
T 1bpo_A 303 IFVTAPHEATAGIIGVNRKGQVLSVCV 329 (494)
T ss_dssp EEEEEEETTTTEEEEEETTCEEEEEEE
T ss_pred eEEecccCCCCcEEEEccCceEEEEEE
Confidence 544444444444444556665554444
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=97.81 E-value=0.0019 Score=57.97 Aligned_cols=163 Identities=9% Similarity=0.134 Sum_probs=108.0
Q ss_pred CCcEEEEEECCCCCEEEEEE-CCCeEEEEECCCCeEEEeEEEeCC----C--CcEEEEEE---cCCCCEEEEEeC-----
Q psy14815 90 QRTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQFECNATLEGH----E--NEVKSVTW---SKNGQFLATCSR----- 154 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~~~~----~--~~v~~l~~---~~~~~~l~~~~~----- 154 (479)
.--..+++|.+....+..++ ..++|..||...+....+ .+..- . ..+..+.| .|+++++++...
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTC
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccc
Confidence 33445688988666666666 689999999986653333 33321 1 13679999 588777765432
Q ss_pred --------CCcEEEEEeC---CCCceeeeeeeecc-----------ccceeEEEEecCCCEEEEEEcC-CcEEEEecCCc
Q psy14815 155 --------DKSVWVWEVG---EEDEYECAAVINAH-----------IQDVKKVRFHPFDNILASASYD-DTVKLFKEDKA 211 (479)
Q Consensus 155 --------dg~i~vwd~~---~~~~~~~~~~~~~~-----------~~~v~~l~~~~~~~~l~~~~~d-g~i~i~d~~~~ 211 (479)
+..+..||+. +++.... ..+... ......++..++|+..++++.. +.|...+....
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~-~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWS-VNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK 169 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEE-EESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEE-ecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC
Confidence 5779999998 5533222 122111 1247899999999999999988 88877777643
Q ss_pred ccceEeee-ee--cCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccC
Q psy14815 212 EADWINFA-TL--KSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 256 (479)
Q Consensus 212 ~~~~~~~~-~~--~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 256 (479)
.. .... .. .......+.++++|+++.|++....|.|..+|+..
T Consensus 170 ~~--~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 170 TV--STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CE--EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred EE--eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 21 1111 11 11223467899999999988887799999999863
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.79 E-value=0.0014 Score=62.48 Aligned_cols=157 Identities=10% Similarity=0.087 Sum_probs=99.9
Q ss_pred CcEEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-C----cEEEEEeC
Q psy14815 91 RTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-K----SVWVWEVG 164 (479)
Q Consensus 91 ~~v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-g----~i~vwd~~ 164 (479)
.....++++| ++..|+.+...+.|+.+|+.+++.. .+.........++|+++++.|+++... + .+..++..
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~---~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS---TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE---EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE---EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence 3567899998 4666766666588999999887532 223344568899999999977766542 2 23334433
Q ss_pred CCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 165 EEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 165 ~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
... .....+.. ......++++| ++.++++-..++.|..++...... ..+..... ......++|+|++++|+.+
T Consensus 214 g~~--~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~--~~~~~~~~-~~~P~gia~~pdG~~lyv~ 287 (430)
T 3tc9_A 214 SGF--KVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET--TPLFTIQD-SGWEFHIQFHPSGNYAYIV 287 (430)
T ss_dssp GTS--CSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE--EEEEECSS-SSCCEEEEECTTSSEEEEE
T ss_pred Cce--eeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE--EEEEEcCC-CCcceeEEEcCCCCEEEEE
Confidence 221 11112221 23356789999 677666666788999999875442 11222222 2346789999999955544
Q ss_pred -eCCCeEEEEeccC
Q psy14815 244 -SDDATVKIWKEYK 256 (479)
Q Consensus 244 -~~dg~i~iwd~~~ 256 (479)
...+.|..++...
T Consensus 288 d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 288 VVNQHYILRSDYDW 301 (430)
T ss_dssp ETTTTEEEEEEEET
T ss_pred ECCCCEEEEEeCCc
Confidence 4677899988753
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.79 E-value=0.012 Score=55.15 Aligned_cols=155 Identities=6% Similarity=-0.058 Sum_probs=92.8
Q ss_pred cEEEEEECCCCCEE-EEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-C-CcEEEEEeCCCCc
Q psy14815 92 TIRETAWSPCGNFI-ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-D-KSVWVWEVGEEDE 168 (479)
Q Consensus 92 ~v~~v~~~~~~~~l-~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-d-g~i~vwd~~~~~~ 168 (479)
....+++.+.+..| ++-...+.|.+.++.... ....+...-.....+++.|.+..|+.+.. . +.|..+++.....
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~--~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 237 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH--RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR 237 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTSCS--CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc--eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc
Confidence 44667888755444 444556789888887553 12223333356789999987766666554 3 6788888776422
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEE-EcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCC
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASA-SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 247 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 247 (479)
. ......-...+.|+++|++..|..+ ...+.|..+|+..... . ..+.........+++. .+..+++-...+
T Consensus 238 ~---~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~--~--~~~~~~~~~P~giav~-~~~ly~td~~~~ 309 (386)
T 3v65_B 238 R---IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR--K--AVISQGLPHPFAITVF-EDSLYWTDWHTK 309 (386)
T ss_dssp E---EEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC--E--EEECSSCSSEEEEEEE-TTEEEEEETTTT
T ss_pred E---EEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee--E--EEEECCCCCceEEEEE-CCEEEEeeCCCC
Confidence 1 1112223346789999866555554 4567899999875432 1 1122223445677773 344555555677
Q ss_pred eEEEEeccC
Q psy14815 248 TVKIWKEYK 256 (479)
Q Consensus 248 ~i~iwd~~~ 256 (479)
.|..++...
T Consensus 310 ~V~~~~~~~ 318 (386)
T 3v65_B 310 SINSANKFT 318 (386)
T ss_dssp EEEEEETTT
T ss_pred eEEEEECCC
Confidence 788887433
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=97.77 E-value=0.066 Score=57.40 Aligned_cols=277 Identities=10% Similarity=0.116 Sum_probs=144.6
Q ss_pred ccceEEEEECCC------CCeEEEeeC-CCcEEEEecccccccccccC----CC---------ccceEEEeecCCcEEEe
Q psy14815 11 QGRVWNVSWNPQ------GTMISSCGE-DKNIRLWVMVIREPYEKLHG----LP---------VETSLRQLVEDKNIRLW 70 (479)
Q Consensus 11 ~~~V~~l~~s~~------~~~l~t~~~-dg~v~iwd~~~~~~~~~~~~----~~---------~~~~~~~~~~~~~i~~w 70 (479)
...|.|+++.|. +++++.|.. |++|+|+++.+.+.+....- .| ....+..+..+|.+..+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 457999999863 368999996 99999999986554432211 11 12344555567777666
Q ss_pred cCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcE-EEEEEcCC--CC
Q psy14815 71 GKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEV-KSVTWSKN--GQ 147 (479)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v-~~l~~~~~--~~ 147 (479)
.++..............| ..++.-..+...+..-+.+..+....++.-+ ++. ....+. ...+ ....|+.. ..
T Consensus 633 ~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l-~~s~l~--~~~v~~~~~F~se~~~~ 707 (1158)
T 3ei3_A 633 GLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKL-VFSNVN--LKEVNYMCPLNSDGYPD 707 (1158)
T ss_dssp EECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSE-EEEEBS--SSCCCEEEEECCSSSTT
T ss_pred EEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcC-Cce-EEeccC--hHHhceEeccCcccCCC
Confidence 554322222222222233 3455544454444443344445555555433 331 222222 1223 34445442 23
Q ss_pred EEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcC---------------------------
Q psy14815 148 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD--------------------------- 200 (479)
Q Consensus 148 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d--------------------------- 200 (479)
-++.. .++.+++..+.....+. .+.+. -...++.++++|+.+.++.+..+
T Consensus 708 g~v~~-~~~~LrI~~i~~~~~~~-~~~ip-L~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 (1158)
T 3ei3_A 708 SLALA-NNSTLTIGTIDEIQKLH-IRTVP-LYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVS 784 (1158)
T ss_dssp EEEEE-CSSCEEEEEECCSSSEE-EEEEE-CSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEEC
T ss_pred cEEEE-cCCceEEEEecccCCee-EEEEe-CCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhccc
Confidence 44443 45669999986653322 22222 23467888898877765554421
Q ss_pred ----------------------CcEEEEecCCcccceEeeeeecCCCccEEEEE---EccC-CCEEEEee----------
Q psy14815 201 ----------------------DTVKLFKEDKAEADWINFATLKSHTSTVWSLA---FDRI-GSRLATCS---------- 244 (479)
Q Consensus 201 ----------------------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~-~~~l~s~~---------- 244 (479)
+.|++.|..+.+. .....+.. ...+.+++ |..+ ..+++.|+
T Consensus 785 ~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~--i~~~~l~~-nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~ 861 (1158)
T 3ei3_A 785 SSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEV--LHAHQFLQ-NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEP 861 (1158)
T ss_dssp CCCCC----------CCCEEEEEEEEEEETTTCCE--EEEEECCT-TEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSC
T ss_pred ccccccccccCchhhcCCceeeEEEEEEeCCCCeE--EEEEeCCC-CcceEEEEEEEEccCCCEEEEEEeeecCCCCCCC
Confidence 1234444432221 01111221 22344444 3322 46788776
Q ss_pred CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 245 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
..|.|++|++.. ...+.+..... .+++++++-- +| +|++|- ..+|++|++...+
T Consensus 862 ~~Gri~vf~v~~-------------~kL~lv~~~~v--~g~v~al~~~-~g-~Lla~i-g~~l~vy~l~~~~ 915 (1158)
T 3ei3_A 862 KQGRIVVFQYSD-------------GKLQTVAEKEV--KGAVYSMVEF-NG-KLLASI-NSTVRLYEWTTEK 915 (1158)
T ss_dssp CCEEEEEEEEET-------------TEEEEEEEEEE--SSCEEEEEEE-TT-EEEEEE-TTEEEEEEECTTS
T ss_pred CceEEEEEEEEC-------------CEEEEEEEEEc--CCcCEEEeee-CC-EEEEEc-CCEEEEEECCCCc
Confidence 357899999851 22344443332 5678887643 34 455443 4799999997654
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.77 E-value=0.042 Score=56.34 Aligned_cols=231 Identities=8% Similarity=-0.003 Sum_probs=130.6
Q ss_pred EEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEE-EEECCCeEEEEECCCCeE--EEeEEEeCCC
Q psy14815 58 LRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA-SASFDATTAVWDKRSGQF--ECNATLEGHE 134 (479)
Q Consensus 58 ~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~-t~~~dg~i~iwd~~~~~~--~~~~~~~~~~ 134 (479)
.+.......|+..++.... .. .+ ......+..++|.+....|+ +-...+.|+.+++..... .....+....
T Consensus 397 ~Ll~an~~~Ir~i~l~~~~--~~--~l--~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l 470 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLDRSE--YT--SL--IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI 470 (791)
T ss_dssp EEEEECBSSEEEECTTSCC--CE--EE--ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC
T ss_pred ccccccccceeEeeccCCc--ce--ee--ecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCC
Confidence 3444555667777665321 11 11 12346778999998555554 445567899998875311 1223333334
Q ss_pred CcEEEEEEcCCCCEEEEE-eCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc-C-CcEEEEecCCc
Q psy14815 135 NEVKSVTWSKNGQFLATC-SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-D-DTVKLFKEDKA 211 (479)
Q Consensus 135 ~~v~~l~~~~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-d-g~i~i~d~~~~ 211 (479)
.....|++.+.+..|+.+ ...+.|.+.++..... ...+.........|+++|.+..|+.... . +.|...++...
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~---~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~ 547 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR---KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 547 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE---EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeE---EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC
Confidence 556789998877655555 4568899999886532 1222223345789999997655555543 2 67888888754
Q ss_pred ccceEeeeeecCCCccEEEEEEccCCCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEE
Q psy14815 212 EADWINFATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS 290 (479)
Q Consensus 212 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 290 (479)
.. .......-.....|++++.+..|+.+. ..+.|...++..... ..+..-.+. -.....|+
T Consensus 548 ~~----~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~-------------~~v~~~~~~-l~~P~gla 609 (791)
T 3m0c_C 548 DI----YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-------------KTILEDEKR-LAHPFSLA 609 (791)
T ss_dssp CE----EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-------------EEEEECTTT-TSSEEEEE
T ss_pred ce----EEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCce-------------EEEecCCCc-cCCCCEEE
Confidence 32 112222335678999998777776664 456788888743211 111111111 22344666
Q ss_pred ecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 291 WCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 291 ~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+.. +.++++-...+.|...+..+++
T Consensus 610 v~~-~~lYwtD~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 610 VFE-DKVFWTDIINEAIFSANRLTGS 634 (791)
T ss_dssp EET-TEEEEEETTTTEEEEEETTTCC
T ss_pred EeC-CEEEEEECCCCEEEEEeCCCCc
Confidence 633 3344444556778777766654
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=97.74 E-value=0.03 Score=52.57 Aligned_cols=160 Identities=10% Similarity=-0.006 Sum_probs=98.2
Q ss_pred CCcEEEEEECCC-CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC--CCcEEEEEeCCC
Q psy14815 90 QRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEE 166 (479)
Q Consensus 90 ~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--dg~i~vwd~~~~ 166 (479)
......+++.+. +.+.++-...+.|.+.++..... ...+...-.....|++.|.+..|+.... .+.|...++...
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~--~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~ 235 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR--KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 235 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSE--EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCce--EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC
Confidence 356778888874 44445555678999999886642 2233333456789999997666666653 367888888764
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeC
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 245 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 245 (479)
.... .....-...+.|++++++..|..+. ..+.|..+|++.... ..+............+++. .+..+++-..
T Consensus 236 ~~~~---~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~--~~~~~~~~~l~~P~gl~v~-~~~lywtd~~ 309 (400)
T 3p5b_L 236 DIYS---LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR--KTILEDEKRLAHPFSLAVF-EDKVFWTDII 309 (400)
T ss_dssp SCEE---EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC--EEEEECSSTTSSEEEEEEE-TTEEEEEESS
T ss_pred ccEE---EEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc--EEEEeCCCCCCCCEEEEEe-CCEEEEecCC
Confidence 3211 1222224568899998776666654 467899999875442 2222221222344566663 2344455556
Q ss_pred CCeEEEEeccCC
Q psy14815 246 DATVKIWKEYKP 257 (479)
Q Consensus 246 dg~i~iwd~~~~ 257 (479)
.+.|..+|...+
T Consensus 310 ~~~V~~~~~~~G 321 (400)
T 3p5b_L 310 NEAIFSANRLTG 321 (400)
T ss_dssp SCSEEEEESSSC
T ss_pred CCeEEEEEcCCC
Confidence 677888885444
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=0.019 Score=52.97 Aligned_cols=248 Identities=11% Similarity=0.026 Sum_probs=126.7
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe---CCCCcEEEEEEcCC---CCEEEEEeC----C----
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE---GHENEVKSVTWSKN---GQFLATCSR----D---- 155 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~v~~l~~~~~---~~~l~~~~~----d---- 155 (479)
-.....++|.|+|+ |+++..+|.|++++ .+++ ..+..+. ........|+++|+ +..|+++.. +
T Consensus 28 l~~P~~ia~~pdG~-l~V~e~~g~I~~~d-~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 28 LEVPWSIAPLGGGR-YLVTERPGRLVLIS-PSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CSCEEEEEEEETTE-EEEEETTTEEEEEC-SSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCCeEEEEcCCCe-EEEEeCCCEEEEEe-CCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 35678999999997 55556679999997 4554 3333322 22356889999997 555655543 2
Q ss_pred CcEEEEEeCCCC-c---eee-eeeeec-cccceeEEEEecCCCEEEEEEc-------------CCcEEEEecCCcccc--
Q psy14815 156 KSVWVWEVGEED-E---YEC-AAVINA-HIQDVKKVRFHPFDNILASASY-------------DDTVKLFKEDKAEAD-- 214 (479)
Q Consensus 156 g~i~vwd~~~~~-~---~~~-~~~~~~-~~~~v~~l~~~~~~~~l~~~~~-------------dg~i~i~d~~~~~~~-- 214 (479)
..|..|+..... . .+. +..+.. .......++|.|+|.+.++.+. .|.|.-++....-..
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~n 184 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADN 184 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTS
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCC
Confidence 567778776531 1 111 111221 1123467999999987776442 245666655432000
Q ss_pred ---eEeeeeecCCCccEEEEEEcc-CCCEEEEeeCCCe-EEEEeccCCCCCCCCCCCCC----CCceEEEEEEecccccc
Q psy14815 215 ---WINFATLKSHTSTVWSLAFDR-IGSRLATCSDDAT-VKIWKEYKPGNSAGIPTPDN----DSVWKCVCTLSGHHGRT 285 (479)
Q Consensus 215 ---~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 285 (479)
...+. ..++.. ...++|+| ++..+++-..... -.|.-+..+.. ...+.... .....++..+.. ....
T Consensus 185 pf~~~~i~-a~G~rn-p~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~n-yGwp~~~g~~~~~~~~~p~~~~~~-~~~a 260 (354)
T 3a9g_A 185 PFPNSPIW-SYGHRN-PQGIDWHRASGVMVATEHGPVGHDEVNIILKGGN-YGWPLATGKAGRGEFVDPVIDTGS-ETWA 260 (354)
T ss_dssp SSTTCCEE-EECCSC-CCEEEECTTTCCEEEEECCSSSCCEEEEECTTCB-CCTTTCCSCCCCTTSCCCSEECTT-CCCC
T ss_pred CCCCCcEE-EEccCC-cceEEEeCCCCCEEEEecCCCCCcEEEEecCCCc-CCCCcccCCCCCCCCcCCEeecCC-CCcC
Confidence 00011 122332 35799999 5655444322221 11222222211 10000000 000011222211 1345
Q ss_pred EEEEEec-------CCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 286 IYDISWC-------HLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 286 i~~l~~~-------~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
...++|. .++.++++.-..+.|...++..... ... ...+..+....+..+++.|||...
T Consensus 261 p~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~---~~~---~~~~~~~~~~rp~~v~~~pDG~ly 326 (354)
T 3a9g_A 261 PSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNME---VRK---ISTFFKNVFGRLRDVVIDDDGGIL 326 (354)
T ss_dssp EEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGC---EEE---EEEECTTTSCCEEEEEECTTSCEE
T ss_pred CcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCc---ccc---eeeeccCCCCCeeEEEECCCCcEE
Confidence 7788884 4677777666677888888765321 000 112222224578899999999643
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=97.73 E-value=0.023 Score=51.48 Aligned_cols=157 Identities=10% Similarity=-0.009 Sum_probs=95.4
Q ss_pred cEEEEEECCCCC-EEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC--CCcEEEEEeCCCCc
Q psy14815 92 TIRETAWSPCGN-FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDE 168 (479)
Q Consensus 92 ~v~~v~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--dg~i~vwd~~~~~~ 168 (479)
....+++.+.+. +.++-...+.|.++++..... .............+++.|.+..|+.+.. .+.|...++.....
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~--~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 157 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR--KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR 157 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE--EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe
Confidence 456788887444 445555678999999876532 2222234456789999987666666653 57788888765421
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCC
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 247 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 247 (479)
.. .....-...+.++++|++..|..+. ..+.|..+|++.... ..+. .........+++.. +..+.+-...+
T Consensus 158 ~~---~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~--~~~~--~~~~~~P~glav~~-~~lywtd~~~~ 229 (318)
T 3sov_A 158 FI---IINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR--QAVV--KGSLPHPFALTLFE-DILYWTDWSTH 229 (318)
T ss_dssp EE---EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEE--CSCCSCEEEEEEET-TEEEEEETTTT
T ss_pred EE---EEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce--EEEe--cCCCCCceEEEEeC-CEEEEEecCCC
Confidence 11 1112223457899999666555554 567899999875432 1111 22234456777753 34455555667
Q ss_pred eEEEEeccCCC
Q psy14815 248 TVKIWKEYKPG 258 (479)
Q Consensus 248 ~i~iwd~~~~~ 258 (479)
.|..++...+.
T Consensus 230 ~V~~~~~~~G~ 240 (318)
T 3sov_A 230 SILACNKYTGE 240 (318)
T ss_dssp EEEEEETTTCC
T ss_pred eEEEEECCCCC
Confidence 88888865443
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.033 Score=51.34 Aligned_cols=244 Identities=11% Similarity=0.051 Sum_probs=121.7
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
-..-..|+|.|+|+++++ ..+|.|.+++ +++. ..+. ++ . ......
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~-~~~~--------------------~~----------~-v~~~g~ 74 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRL-STYA--------------------EL----------S-VYHRGE 74 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEE-EEEE--------------------EC----------C-CCCSTT
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCc-cEee--------------------cc----------e-EeecCC
Confidence 345678999999985555 4568888887 2221 1100 00 0 001223
Q ss_pred CcEEEEEECCC---CCEEEEEEC-C-----CeEEEEECCCCeE---EEe-EEEe---CCCCcEEEEEEcCCCCEEEEEeC
Q psy14815 91 RTIRETAWSPC---GNFIASASF-D-----ATTAVWDKRSGQF---ECN-ATLE---GHENEVKSVTWSKNGQFLATCSR 154 (479)
Q Consensus 91 ~~v~~v~~~~~---~~~l~t~~~-d-----g~i~iwd~~~~~~---~~~-~~~~---~~~~~v~~l~~~~~~~~l~~~~~ 154 (479)
.....++++|+ +..|+.+.. . +.|..++...++. +.+ ..+. ........++|.|||.+.++.+.
T Consensus 75 ~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~ 154 (352)
T 2ism_A 75 SGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGE 154 (352)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCC
T ss_pred CCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECC
Confidence 56788999998 555554433 2 6788888765421 112 2233 11123468999999976555432
Q ss_pred -------------CCcEEEEEeCCCC----ce-----eeeeee-eccccceeEEEEec-CCCEEEEEEcCCcE------E
Q psy14815 155 -------------DKSVWVWEVGEED----EY-----ECAAVI-NAHIQDVKKVRFHP-FDNILASASYDDTV------K 204 (479)
Q Consensus 155 -------------dg~i~vwd~~~~~----~~-----~~~~~~-~~~~~~v~~l~~~~-~~~~l~~~~~dg~i------~ 204 (479)
.|.|..++....- .. .....+ .++ .....++|+| +++++++-.....+ .
T Consensus 155 ~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~de 233 (352)
T 2ism_A 155 VYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDE 233 (352)
T ss_dssp TTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCE
T ss_pred CCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeE
Confidence 1455555544310 00 000111 122 2356789999 56655543333321 1
Q ss_pred EEecCCccc-c-------------eEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCC
Q psy14815 205 LFKEDKAEA-D-------------WINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDS 270 (479)
Q Consensus 205 i~d~~~~~~-~-------------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 270 (479)
+.-+..+.. . ..+...+. +......++| .+|..+++.-..+.|...++....... .
T Consensus 234 i~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~-~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~--------~ 303 (352)
T 2ism_A 234 VNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP-QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRW--------R 303 (352)
T ss_dssp EEEECTTCBCCTTTCCSCCCCTTSCCCSEECT-TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEE--------E
T ss_pred EEEeccCCcCCCCcccCCCCCCCCcCCeEecC-CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcce--------e
Confidence 222222210 0 01222332 2234567777 456666655566677777764322100 0
Q ss_pred ceEEEEEEeccccccEEEEEecCCCCeEEEEe
Q psy14815 271 VWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 271 ~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~ 302 (479)
... ...+-.. ...+..+++.|||.++++..
T Consensus 304 ~~~-~~~~~~~-~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 304 VLR-VETALSG-FGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp EEE-EEEEEES-SCCEEEEEECTTSCEEEEEC
T ss_pred ecc-hheeccc-CCCeeEEEECCCCcEEEEEe
Confidence 001 1111121 35789999999998776654
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=97.66 E-value=0.018 Score=52.19 Aligned_cols=144 Identities=13% Similarity=0.154 Sum_probs=88.9
Q ss_pred CCeEEEEEC--CCCeEEEeEE----EeCCCCcEEEEEE--cCC-CC-EEEEEeCCCcEEEEEeCCC----Cceeeeeeee
Q psy14815 111 DATTAVWDK--RSGQFECNAT----LEGHENEVKSVTW--SKN-GQ-FLATCSRDKSVWVWEVGEE----DEYECAAVIN 176 (479)
Q Consensus 111 dg~i~iwd~--~~~~~~~~~~----~~~~~~~v~~l~~--~~~-~~-~l~~~~~dg~i~vwd~~~~----~~~~~~~~~~ 176 (479)
+++|++|++ .+++...+.. +......+..+++ ++. +. ++++...+|.+..|++... -..+.++.+.
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~ 177 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK 177 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec
Confidence 579999966 4554222211 1111145666777 664 43 6888888999999999542 1224445554
Q ss_pred ccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcc-cceEeeeeec-C-CCccEEEEEE--ccCCC-EEEEee-CCCeE
Q psy14815 177 AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE-ADWINFATLK-S-HTSTVWSLAF--DRIGS-RLATCS-DDATV 249 (479)
Q Consensus 177 ~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~-~-~~~~v~~~~~--~~~~~-~l~s~~-~dg~i 249 (479)
. .+.+..+...+....|+.+-++.-|..|+.+... .....+.... + -...+..|++ .++++ +|++.+ .+++.
T Consensus 178 l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~ 256 (355)
T 3amr_A 178 M-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSY 256 (355)
T ss_dssp C-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEE
T ss_pred C-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEE
Confidence 3 3567888999988899999998777777754222 1112233221 2 2236778877 45555 666555 67799
Q ss_pred EEEecc
Q psy14815 250 KIWKEY 255 (479)
Q Consensus 250 ~iwd~~ 255 (479)
.+||..
T Consensus 257 ~Vydr~ 262 (355)
T 3amr_A 257 AIYDRQ 262 (355)
T ss_dssp EEEESS
T ss_pred EEEECC
Confidence 999974
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.026 Score=51.95 Aligned_cols=248 Identities=13% Similarity=0.073 Sum_probs=124.5
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe---CCCCcEEEEEEcCC---CCEEEEEeCC------CcE
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE---GHENEVKSVTWSKN---GQFLATCSRD------KSV 158 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~v~~l~~~~~---~~~l~~~~~d------g~i 158 (479)
.....++|.|+|++++ +..+|.|.+++ .++...+..+. ........++|+|+ +..|+++... +.|
T Consensus 31 ~~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 4567999999998555 45679999998 45433333222 12356889999998 5556655442 568
Q ss_pred EEEEeCCCCc--ee-eeeeee---ccccceeEEEEecCCCEEEEEEc-------------CCcEEEEecCCcccce----
Q psy14815 159 WVWEVGEEDE--YE-CAAVIN---AHIQDVKKVRFHPFDNILASASY-------------DDTVKLFKEDKAEADW---- 215 (479)
Q Consensus 159 ~vwd~~~~~~--~~-~~~~~~---~~~~~v~~l~~~~~~~~l~~~~~-------------dg~i~i~d~~~~~~~~---- 215 (479)
..|+...... .+ .+..+. ........++|.|+|.+.++.+. .|.|.-++....-...
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~ 187 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFL 187 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCccc
Confidence 8888764311 11 111122 11123468999999977666432 1456666654310000
Q ss_pred -----EeeeeecCCCccEEEEEEcc-CCCEEEEeeCCCeE------EEEeccCCCCCCCCCCCCC----CCceEEEEEEe
Q psy14815 216 -----INFATLKSHTSTVWSLAFDR-IGSRLATCSDDATV------KIWKEYKPGNSAGIPTPDN----DSVWKCVCTLS 279 (479)
Q Consensus 216 -----~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i------~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~ 279 (479)
.......++ .....++|+| ++..+++-.....+ .+.-+..+.. ...+.... .....++..+.
T Consensus 188 ~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~n-yGwp~~~g~~~~~~~~~p~~~~~ 265 (352)
T 2ism_A 188 GRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGN-YGWPRVVGRGNDPRYRDPLYFWP 265 (352)
T ss_dssp TCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCB-CCTTTCCSCCCCTTSCCCSEECT
T ss_pred CCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCc-CCCCcccCCCCCCCCcCCeEecC
Confidence 000001122 2356789999 55555443322221 2333322221 00000000 00001122222
Q ss_pred ccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 280 GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 280 ~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
. ......++| .++.++++.-..+.|...+++.......... ...+. .....+..+++.|||...
T Consensus 266 ~--~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~---~~~~~-~~~~rp~~v~~~pdG~ly 329 (352)
T 2ism_A 266 Q--GFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLR---VETAL-SGFGRLREVQVGPDGALY 329 (352)
T ss_dssp T--CCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEE---EEEEE-ESSCCEEEEEECTTSCEE
T ss_pred C--CCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecc---hheec-ccCCCeeEEEECCCCcEE
Confidence 1 234567777 4666666666667777777664331000000 11111 123578999999999644
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00043 Score=70.29 Aligned_cols=202 Identities=8% Similarity=-0.011 Sum_probs=111.8
Q ss_pred CcEEEEEECCCCCEEEEEE-CCCeEEEEECCC----CeEEEeEEEeCCCCcEEEEEEcCCCCEEE-EEeCCCcEEEEEeC
Q psy14815 91 RTIRETAWSPCGNFIASAS-FDATTAVWDKRS----GQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSVWVWEVG 164 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~----~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~i~vwd~~ 164 (479)
..+..++|.+.+..|+.+. ..+.|..+++.+ .. ....+.........|++.+.+..|+ +-...+.|.++++.
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~--~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~d 483 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS--YDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 483 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CC--CCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSS
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcc--eEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecC
Confidence 4567889998766666554 457899999875 21 1111111122345678875444444 44456789999987
Q ss_pred CCCceeeeeeeeccccceeEEEEecCCCEEEEEEc-C-CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 165 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-D-DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 165 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-d-g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
.... ...+.........++++|.+.+|+.+.. . +.|..+++..... ..+ ....-.....|+|+|++..|+.
T Consensus 484 g~~~---~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~--~~l--~~~~l~~PnGlavd~~~~~LY~ 556 (699)
T 1n7d_A 484 GVKR---KTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--YSL--VTENIQWPNGITLDLLSGRLYW 556 (699)
T ss_dssp SCCE---EEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC--CEE--SCSSCSSCCCEEECTTTCCEEE
T ss_pred CCce---EEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe--eEE--EeCCCCCccEEEEeccCCEEEE
Confidence 6521 1112222234578899996655554442 2 6788887764332 111 1112234567999988666554
Q ss_pred e-eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 243 C-SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 243 ~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+ +..+.|..+++..... ..+...... ......|++..+ .++++....+.|..++..+++
T Consensus 557 aD~~~~~I~~~d~dG~~~-------------~~~~~~~~~-~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 557 VDSKLHSISSIDVNGGNR-------------KTILEDEKR-LAHPFSLAVFED-KVFWTDIINEAIFSANRLTGS 616 (699)
T ss_dssp EETTTTEEEEECSSSSCC-------------EEECCCSSS-CSSCCCCEEETT-EEEEECSTTTCEEEEETTTEE
T ss_pred EecCCCeEEEEccCCCce-------------EEEEecCCc-CCCceEeEEECC-EEEEEeCCCCeEEEEEccCCC
Confidence 4 4567899988743211 111111111 122334555443 455555667889988877665
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.058 Score=49.38 Aligned_cols=199 Identities=11% Similarity=0.070 Sum_probs=115.7
Q ss_pred CcEEEEEECCCCCEEEEE------------ECCCeEEEEECCC--CeEEEeEEEeC-----CCCcEEEEEEcC--CCC-E
Q psy14815 91 RTIRETAWSPCGNFIASA------------SFDATTAVWDKRS--GQFECNATLEG-----HENEVKSVTWSK--NGQ-F 148 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~------------~~dg~i~iwd~~~--~~~~~~~~~~~-----~~~~v~~l~~~~--~~~-~ 148 (479)
.....+...|+|..++++ ..+|.|.++|..+ ++...+ .+.+ .......+.+.+ ++. +
T Consensus 50 ~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l-~~~g~~~~~~~f~PhGi~~~~d~dg~~~ 128 (355)
T 3sre_A 50 NGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSEL-EIIGNTLDISSFNPHGISTFIDDDNTVY 128 (355)
T ss_dssp SCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEEC-EEECSSCCGGGCCEEEEEEEECTTCCEE
T ss_pred CCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEE-EccCCCCCcCceeeeeeEEEECCCCcEE
Confidence 345566678877554444 1689999999974 333322 3332 234677788766 344 4
Q ss_pred EEEEe-C--CCcEEEEEeCCCC-ceeeeeeeecc-ccceeEEEEecCCCEEEEEEc-----------------CCcEEEE
Q psy14815 149 LATCS-R--DKSVWVWEVGEED-EYECAAVINAH-IQDVKKVRFHPFDNILASASY-----------------DDTVKLF 206 (479)
Q Consensus 149 l~~~~-~--dg~i~vwd~~~~~-~~~~~~~~~~~-~~~v~~l~~~~~~~~l~~~~~-----------------dg~i~i~ 206 (479)
|+++. . +..|.+|++.... ....+..+.+. -...+.+.+.++|++.++... .|.|.-+
T Consensus 129 L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~ 208 (355)
T 3sre_A 129 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYY 208 (355)
T ss_dssp EEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEE
T ss_pred EEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEE
Confidence 54443 2 4678888887643 22333333322 234689999999987777541 2345555
Q ss_pred ecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccccc
Q psy14815 207 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRT 285 (479)
Q Consensus 207 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (479)
|.. +. ..+...-...+.++|+||++.|+.+. ..+.|..|++..... ......+.. ...
T Consensus 209 d~~--~~-----~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~------------l~~~~~~~~--~g~ 267 (355)
T 3sre_A 209 SPN--DV-----RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWT------------LTPLRVLSF--DTL 267 (355)
T ss_dssp CTT--CC-----EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSC------------EEEEEEEEC--SSE
T ss_pred ECC--eE-----EEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCc------------EecCEEEeC--CCC
Confidence 442 21 11112224468899999998877654 567899999853221 122223321 456
Q ss_pred EEEEEecC-CCCeEEEEeCC-CeEEEcc
Q psy14815 286 IYDISWCH-LTDLIATACGD-DAIRIFK 311 (479)
Q Consensus 286 i~~l~~~~-~~~~l~~~~~d-g~i~vw~ 311 (479)
.-.+++.+ +|.+.+++..+ +.|..|+
T Consensus 268 PDGi~vD~e~G~lwva~~~~g~~v~~~~ 295 (355)
T 3sre_A 268 VDNISVDPVTGDLWVGCHPNGMRIFFYD 295 (355)
T ss_dssp EEEEEECTTTCCEEEEEESCHHHHHSCC
T ss_pred CceEEEeCCCCcEEEEecCCceEEEEEC
Confidence 77899999 59888766544 3444443
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.11 Score=51.72 Aligned_cols=203 Identities=8% Similarity=-0.015 Sum_probs=117.0
Q ss_pred cCCcEEEEEECCCCCEEEEEE-CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEE-eCCCcEEEEEeCCC
Q psy14815 89 HQRTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC-SRDKSVWVWEVGEE 166 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~vwd~~~~ 166 (479)
....+..++|++.+..|+.+. ..+.|..+++..... ....+...-.....+++.+.+..|+.+ ...+.|.+.++...
T Consensus 38 ~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~-~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~ 116 (619)
T 3s94_A 38 GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES-VQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 116 (619)
T ss_dssp CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCc-eEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCC
Confidence 345678999998766666554 467899999876531 122333333568899999866655555 45688999998865
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEEc--CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASASY--DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 244 (479)
... ......-.....|++.|.+..|+.... .+.|...+++.... ..+ ....-.....++++++++.|+.+.
T Consensus 117 ~~~---~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~--~~l--~~~~~~~P~Glald~~~~~LY~aD 189 (619)
T 3s94_A 117 LRK---VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR--FII--INSEIYWPNGLTLDYEEQKLYWAD 189 (619)
T ss_dssp SCE---EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC--EEE--ECSSCSSEEEEEEETTTTEEEEEE
T ss_pred CEE---EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce--EEE--EeCCCCCCcEEEEEccCCEEEEEe
Confidence 321 112123344678999997655555543 45677777764432 111 122344678999999877776654
Q ss_pred -CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 245 -DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 245 -~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
..+.|...|+...... . + ..+. ......+++..+ .++.+-...+.|...|..+++
T Consensus 190 ~~~~~I~~~~~dG~~~~------------~-~--~~~~-~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 190 AKLNFIHKSNLDGTNRQ------------A-V--VKGS-LPHPFALTLFED-ILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp TTTCCEEEESSSCCEEC-------------------------CCCEEESSS-EEEEECTTTCSEEEEESSSCC
T ss_pred CCCCeEEEecCCCCccE------------E-E--EeCC-CCCceEEEEeCC-EEEEecCCCCEEEEEECCCCc
Confidence 4567777776422111 0 0 1111 112345666555 444444556778888876664
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.052 Score=51.97 Aligned_cols=162 Identities=9% Similarity=0.142 Sum_probs=96.8
Q ss_pred cEEEEEECC-CCCEEEEE-ECCCeEEEEECCCCeEEEeEEEeC-CCCcEEEEEE-------cCCCCEEEEEeCCC-c---
Q psy14815 92 TIRETAWSP-CGNFIASA-SFDATTAVWDKRSGQFECNATLEG-HENEVKSVTW-------SKNGQFLATCSRDK-S--- 157 (479)
Q Consensus 92 ~v~~v~~~~-~~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~l~~-------~~~~~~l~~~~~dg-~--- 157 (479)
....|+|+| +...|+.+ ...+.|++.|+.++....+..... .......++| +++++.|+++...+ .
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 467899998 34444444 445689999999886433222111 1235889999 99999777776654 2
Q ss_pred ---EEEEEeCCCCceee---eeeeeccccceeEEEEecC-CCEEEEEEcCCcEEEEecC-------Cccc------c---
Q psy14815 158 ---VWVWEVGEEDEYEC---AAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKED-------KAEA------D--- 214 (479)
Q Consensus 158 ---i~vwd~~~~~~~~~---~~~~~~~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~-------~~~~------~--- 214 (479)
|.+++......+.. ...+... .....++++|+ +.++++-..++.|..+|+. ++.. .
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 55665443112210 0122221 23457889994 5555566677889999987 3332 0
Q ss_pred -eEeeeeecCCCccEEEEEEccCCCEEEEe-eCCCeEEEEecc
Q psy14815 215 -WINFATLKSHTSTVWSLAFDRIGSRLATC-SDDATVKIWKEY 255 (479)
Q Consensus 215 -~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~ 255 (479)
...+... ........++|+|+++.|+.+ +....|+.++..
T Consensus 299 ~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 299 TFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp TEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 1122222 223445789999999965544 456788887754
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.039 Score=49.53 Aligned_cols=191 Identities=7% Similarity=0.061 Sum_probs=103.0
Q ss_pred CCCEEEEEECC----CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC------CcEEEEEeCCCCcee
Q psy14815 101 CGNFIASASFD----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD------KSVWVWEVGEEDEYE 170 (479)
Q Consensus 101 ~~~~l~t~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~~ 170 (479)
++..++.|+.+ ..+.+||..++++.....+.........+.+ +++.++.|+.+ ..+.+||..+.. +.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~-W~ 131 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTES-WH 131 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTE-EE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCc-eE
Confidence 45666777654 6789999999987665544332222223333 56777777765 458889988752 33
Q ss_pred eeeeeeccccceeEEEEecCCCEEEEEEc---------CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE
Q psy14815 171 CAAVINAHIQDVKKVRFHPFDNILASASY---------DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 171 ~~~~~~~~~~~v~~l~~~~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 241 (479)
.+..+.........+.+ ++++++.|+. -..+.+||..+.. |..+..+......-..+.+ +++.++
T Consensus 132 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~~~i~v 205 (306)
T 3ii7_A 132 TKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATET--WTELCPMIEARKNHGLVFV--KDKIFA 205 (306)
T ss_dssp EECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE--TTEEEE
T ss_pred eCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCe--EEECCCccchhhcceEEEE--CCEEEE
Confidence 33222211111122222 5677777764 3458899987653 4444333322222222333 466667
Q ss_pred EeeCC-----CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC-----CeEEEcc
Q psy14815 242 TCSDD-----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD-----DAIRIFK 311 (479)
Q Consensus 242 s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d-----g~i~vw~ 311 (479)
.|+.+ ..+.+||+... .|..+..+... ......+.+ ++++++.|+.+ ..+.+||
T Consensus 206 ~GG~~~~~~~~~~~~yd~~~~-------------~W~~~~~~p~~-r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd 269 (306)
T 3ii7_A 206 VGGQNGLGGLDNVEYYDIKLN-------------EWKMVSPMPWK-GVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYN 269 (306)
T ss_dssp ECCEETTEEBCCEEEEETTTT-------------EEEECCCCSCC-BSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEE
T ss_pred EeCCCCCCCCceEEEeeCCCC-------------cEEECCCCCCC-ccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEc
Confidence 76643 35788886432 33333222211 111222223 66777777754 5688888
Q ss_pred cCCCC
Q psy14815 312 ENPEA 316 (479)
Q Consensus 312 ~~~~~ 316 (479)
..+.+
T Consensus 270 ~~~~~ 274 (306)
T 3ii7_A 270 TETDK 274 (306)
T ss_dssp TTTTE
T ss_pred CCCCe
Confidence 87764
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.11 Score=53.24 Aligned_cols=159 Identities=9% Similarity=-0.014 Sum_probs=95.3
Q ss_pred CCcEEEEEECCCCCEEE-EEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC--CCcEEEEEeCCC
Q psy14815 90 QRTIRETAWSPCGNFIA-SASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEE 166 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--dg~i~vwd~~~~ 166 (479)
......|++.+.+..|+ +-...+.|.+.++..... ...+...-.....|++.|.+..|+.+.. .+.|...++...
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~--~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~ 547 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR--KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 547 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE--EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeE--EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC
Confidence 34566788887665554 445578999999986642 2223334456889999997666766653 267888888765
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE-Eee
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA-TCS 244 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~ 244 (479)
.. .......-...+.|++++.+..|..+. ..+.|..+++..... ..+..-...-.....|++. +.+|+ +-.
T Consensus 548 ~~---~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~--~~v~~~~~~l~~P~glav~--~~~lYwtD~ 620 (791)
T 3m0c_C 548 DI---YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR--KTILEDEKRLAHPFSLAVF--EDKVFWTDI 620 (791)
T ss_dssp CE---EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEEECTTTTSSEEEEEEE--TTEEEEEET
T ss_pred ce---EEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCce--EEEecCCCccCCCCEEEEe--CCEEEEEEC
Confidence 32 122222234578899998666666554 456799999875443 1122111122234466664 33444 444
Q ss_pred CCCeEEEEeccCC
Q psy14815 245 DDATVKIWKEYKP 257 (479)
Q Consensus 245 ~dg~i~iwd~~~~ 257 (479)
..+.|...|...+
T Consensus 621 ~~~~I~~~dk~tG 633 (791)
T 3m0c_C 621 INEAIFSANRLTG 633 (791)
T ss_dssp TTTEEEEEETTTC
T ss_pred CCCEEEEEeCCCC
Confidence 5567777775444
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.066 Score=47.93 Aligned_cols=191 Identities=18% Similarity=0.239 Sum_probs=101.7
Q ss_pred CCCEEEEEECC-----CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC-----cEEEEEeCCCCcee
Q psy14815 101 CGNFIASASFD-----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK-----SVWVWEVGEEDEYE 170 (479)
Q Consensus 101 ~~~~l~t~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~~ 170 (479)
++..++.|+.+ ..+.+||..+.++..+..+........++.+ ++..++.|+.++ .+.+||+.+. .+.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~-~W~ 137 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSN-EWF 137 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTT-EEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCC-eEe
Confidence 55666676654 3689999999987665544332222222323 567777777654 4778888765 233
Q ss_pred eeeeeeccccceeEEEEecCCCEEEEEEcC-------CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 171 CAAVINAHIQDVKKVRFHPFDNILASASYD-------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 171 ~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
.+..+.........+.+ ++++++.|+.+ ..+.+||..+.. |..+..+.........+.+ +++.++.|
T Consensus 138 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~~~iyv~G 211 (302)
T 2xn4_A 138 HVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNE--WTYIAEMSTRRSGAGVGVL--NNLLYAVG 211 (302)
T ss_dssp EECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred ecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCc--EEECCCCccccccccEEEE--CCEEEEEC
Confidence 33222221111222222 56777777643 358889987543 4444333322222223333 46677777
Q ss_pred eCC-----CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCC-----eEEEcccC
Q psy14815 244 SDD-----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD-----AIRIFKEN 313 (479)
Q Consensus 244 ~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg-----~i~vw~~~ 313 (479)
+.+ ..+.+||+.. ..|..+..+... ...-..+. -++++++.|+.++ .+.+||..
T Consensus 212 G~~~~~~~~~~~~yd~~~-------------~~W~~~~~~~~~-r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~ 275 (302)
T 2xn4_A 212 GHDGPLVRKSVEVYDPTT-------------NAWRQVADMNMC-RRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPT 275 (302)
T ss_dssp CBSSSSBCCCEEEEETTT-------------TEEEEECCCSSC-CBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETT
T ss_pred CCCCCcccceEEEEeCCC-------------CCEeeCCCCCCc-cccCeEEE--ECCEEEEECCcCCCcccccEEEEcCC
Confidence 654 3678888643 234433322211 11111222 2667777777653 47888887
Q ss_pred CCC
Q psy14815 314 PEA 316 (479)
Q Consensus 314 ~~~ 316 (479)
+.+
T Consensus 276 ~~~ 278 (302)
T 2xn4_A 276 TDK 278 (302)
T ss_dssp TTE
T ss_pred CCe
Confidence 764
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0018 Score=65.85 Aligned_cols=154 Identities=11% Similarity=-0.001 Sum_probs=86.1
Q ss_pred EEEEEECCCC-CEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC--CCcEEEEEeCCCCce
Q psy14815 93 IRETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDEY 169 (479)
Q Consensus 93 v~~v~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~ 169 (479)
...+++.+.+ .++++-...+.|.+.++...... ..+.........+++.|.+..|+.+.. .+.|..+++......
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~--~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~ 532 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK--TLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 532 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEE--EECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceE--EEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee
Confidence 4457777544 44444455678999998765422 222222345678899986665555543 267888777654211
Q ss_pred eeeeeeeccccceeEEEEecCCCEEE-EEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCe
Q psy14815 170 ECAAVINAHIQDVKKVRFHPFDNILA-SASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 248 (479)
Q Consensus 170 ~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~ 248 (479)
. .....-...+.|+|+|++..|. +-...+.|..+++..... ..+............|++..+ ..+++....+.
T Consensus 533 ~---l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~--~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~ 606 (699)
T 1n7d_A 533 S---LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR--KTILEDEKRLAHPFSLAVFED-KVFWTDIINEA 606 (699)
T ss_dssp E---ESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCC--EEECCCSSSCSSCCCCEEETT-EEEEECSTTTC
T ss_pred E---EEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCce--EEEEecCCcCCCceEeEEECC-EEEEEeCCCCe
Confidence 1 1111123456899998765454 444567899999875332 122211111122334555443 34455556678
Q ss_pred EEEEec
Q psy14815 249 VKIWKE 254 (479)
Q Consensus 249 i~iwd~ 254 (479)
|..++.
T Consensus 607 V~~~d~ 612 (699)
T 1n7d_A 607 IFSANR 612 (699)
T ss_dssp EEEEET
T ss_pred EEEEEc
Confidence 888885
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=97.32 E-value=0.042 Score=50.88 Aligned_cols=153 Identities=18% Similarity=0.198 Sum_probs=98.0
Q ss_pred ECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC--CCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCcee-----
Q psy14815 98 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEG--HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE----- 170 (479)
Q Consensus 98 ~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~----- 170 (479)
.+.++..++.+- ++.||.-++..+..-....++. .-..+..+..+|+|++|+..+. ..|.|-.+..+....
T Consensus 28 ~~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~ 105 (452)
T 3pbp_A 28 SSQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSI 105 (452)
T ss_dssp EETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHH
T ss_pred EEcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCccccc
Confidence 344666666665 4788888887443112222221 1236788999999999988855 578888887321000
Q ss_pred ----eeeeeec------cccceeEEEEecC---CCEEEEEEcCCcEEEEecCCcccceEeee------eecCCCccEEEE
Q psy14815 171 ----CAAVINA------HIQDVKKVRFHPF---DNILASASYDDTVKLFKEDKAEADWINFA------TLKSHTSTVWSL 231 (479)
Q Consensus 171 ----~~~~~~~------~~~~v~~l~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------~~~~~~~~v~~~ 231 (479)
....+.- ...+|..+.|+|- +..|++-..|+.|++||+......+..+. ........|.++
T Consensus 106 ~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~ 185 (452)
T 3pbp_A 106 QDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDL 185 (452)
T ss_dssp HHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEE
T ss_pred ccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEE
Confidence 0111211 2467999999994 46899999999999999987433222111 112233678999
Q ss_pred EEccCCCEEEEee--CCCeEEEE
Q psy14815 232 AFDRIGSRLATCS--DDATVKIW 252 (479)
Q Consensus 232 ~~~~~~~~l~s~~--~dg~i~iw 252 (479)
+|.+++-.|+..+ ..|.|+-.
T Consensus 186 ~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 186 EFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EECTTSSCEEEEECTTSCEEEEE
T ss_pred EEcCCCcEEEEEecCCCCCEEEE
Confidence 9999887777755 77877554
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.078 Score=47.39 Aligned_cols=191 Identities=12% Similarity=0.154 Sum_probs=102.5
Q ss_pred CCCEEEEEECC-----CeEEEEECCCCe---EEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEEEeCCCC
Q psy14815 101 CGNFIASASFD-----ATTAVWDKRSGQ---FECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVWVWEVGEED 167 (479)
Q Consensus 101 ~~~~l~t~~~d-----g~i~iwd~~~~~---~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~vwd~~~~~ 167 (479)
++..++.|+.+ ..+.+||..+++ +..+..+........++.+ +++.++.|+.+ ..+.+||..+.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~- 138 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNID- 138 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT-
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCC-
Confidence 45666777654 468999999887 6655444332222223323 56677777654 35888898765
Q ss_pred ceeeeeeeeccccceeEEEEecCCCEEEEEEcC-----CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 168 EYECAAVINAHIQDVKKVRFHPFDNILASASYD-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
.+..+..+.........+.+ ++++++.|+.+ ..+.+||..+.. |..+..+.........+.+ +++.++.
T Consensus 139 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~--~~~i~v~ 212 (301)
T 2vpj_A 139 QWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGH--WTNVTPMATKRSGAGVALL--NDHIYVV 212 (301)
T ss_dssp EEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE--TTEEEEE
T ss_pred eEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCc--EEeCCCCCcccccceEEEE--CCEEEEE
Confidence 23333322221111222222 57778887754 458889987643 4444333322222223333 4666677
Q ss_pred eeCC-----CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC-----CeEEEccc
Q psy14815 243 CSDD-----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD-----DAIRIFKE 312 (479)
Q Consensus 243 ~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d-----g~i~vw~~ 312 (479)
|+.+ ..+.+||+.. ..|..+..+... ......+.+ ++++++.|+.+ ..+.+||.
T Consensus 213 GG~~~~~~~~~v~~yd~~~-------------~~W~~~~~~p~~-r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~ 276 (301)
T 2vpj_A 213 GGFDGTAHLSSVEAYNIRT-------------DSWTTVTSMTTP-RCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDP 276 (301)
T ss_dssp CCBCSSSBCCCEEEEETTT-------------TEEEEECCCSSC-CBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEET
T ss_pred eCCCCCcccceEEEEeCCC-------------CcEEECCCCCCc-ccceeEEEE--CCEEEEEcCcCCCcccccEEEEcC
Confidence 7654 4688888743 234433322221 111122222 66777777765 35778888
Q ss_pred CCCC
Q psy14815 313 NPEA 316 (479)
Q Consensus 313 ~~~~ 316 (479)
.+.+
T Consensus 277 ~~~~ 280 (301)
T 2vpj_A 277 IIDS 280 (301)
T ss_dssp TTTE
T ss_pred CCCe
Confidence 7654
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.19 Score=50.19 Aligned_cols=199 Identities=10% Similarity=0.050 Sum_probs=122.0
Q ss_pred CCcEEEEEECCCCCEEEEE-ECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEE-eCCCcEEEEEeCCCC
Q psy14815 90 QRTIRETAWSPCGNFIASA-SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC-SRDKSVWVWEVGEED 167 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~vwd~~~~~ 167 (479)
-..+..++|++.+..|+.+ ..++.|..+++...... ..+.........+++.+.+..|+.+ ...+.|.+.++....
T Consensus 36 ~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~--~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~ 113 (628)
T 4a0p_A 36 VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALE--HVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH 113 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT
T ss_pred CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcE--EEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc
Confidence 4568899999866665544 45789999998765422 2223222456788888766555555 446789999987653
Q ss_pred ceeeeeeeeccccceeEEEEecCCCEEEEEEc--CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee-
Q psy14815 168 EYECAAVINAHIQDVKKVRFHPFDNILASASY--DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS- 244 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~- 244 (479)
. .. .....-.....++++|....|..... .+.|...++..... . .+...-.....++++++++.|+.+.
T Consensus 114 ~-~~--l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~--~---~l~~~~~~P~GlalD~~~~~LY~aD~ 185 (628)
T 4a0p_A 114 R-QV--LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER--T---TLVPNVGRANGLTIDYAKRRLYWTDL 185 (628)
T ss_dssp C-EE--EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC--E---EEECSCSSEEEEEEETTTTEEEEEET
T ss_pred E-EE--EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce--E---EEECCCCCcceEEEccccCEEEEEEC
Confidence 2 11 11122344689999996555555542 56788888775442 1 1112345678999999877776654
Q ss_pred CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 245 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
..+.|...|+..... +.+ ... ......+++.. +.++.+-...+.|...|..+++
T Consensus 186 ~~~~I~~~d~dG~~~-------------~v~---~~~-l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 186 DTNLIESSNMLGLNR-------------EVI---ADD-LPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp TTTEEEEEETTSCSC-------------EEE---EEC-CSCEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred CCCEEEEEcCCCCce-------------EEe---ecc-CCCceEEEEEC-CEEEEecCCCCEEEEEECCCCC
Confidence 456788888743211 111 111 23345777754 4455555557888888866654
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=97.19 E-value=0.041 Score=51.00 Aligned_cols=159 Identities=11% Similarity=0.095 Sum_probs=93.0
Q ss_pred CCCCEEEEEeCCCcEEEEEeCCCCceeeeeeee-ccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccce-------
Q psy14815 144 KNGQFLATCSRDKSVWVWEVGEEDEYECAAVIN-AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW------- 215 (479)
Q Consensus 144 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~------- 215 (479)
.+|..++.+ .++.||.-++.....++.+..-. -.-..+..+..+|+|++|+..+. ..|.|..+..+....
T Consensus 30 ~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 30 QNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHH
T ss_pred cCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCccccccc
Confidence 456656655 34778877877543333222110 01225788999999999998864 578888887322000
Q ss_pred -EeeeeecC------CCccEEEEEEccC---CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccccc
Q psy14815 216 -INFATLKS------HTSTVWSLAFDRI---GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRT 285 (479)
Q Consensus 216 -~~~~~~~~------~~~~v~~~~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (479)
...+.+.- ...+|..+.|+|- +..|++-..|+.|++||+......+. .. .+... ...+... ...
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L---~k~~~-~fg~d~~-~~e 181 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VL---NKPNN-SFGLDAR-VND 181 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EE---SCCCS-EEESCSS-CCC
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-ch---hcccc-ccCCCcc-cce
Confidence 01111111 3578999999995 46899999999999999976322111 00 00000 0111122 367
Q ss_pred EEEEEecCCCCeEEEEe--CCCeEEEc
Q psy14815 286 IYDISWCHLTDLIATAC--GDDAIRIF 310 (479)
Q Consensus 286 i~~l~~~~~~~~l~~~~--~dg~i~vw 310 (479)
|.+++|..++-.|...+ ..|.|+-.
T Consensus 182 v~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 182 ITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 88999998765555533 66666543
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.12 Score=46.50 Aligned_cols=147 Identities=10% Similarity=0.101 Sum_probs=79.0
Q ss_pred CCCCEEEEEEC----C-------CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC--------CcEEE
Q psy14815 100 PCGNFIASASF----D-------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD--------KSVWV 160 (479)
Q Consensus 100 ~~~~~l~t~~~----d-------g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d--------g~i~v 160 (479)
.++..++.|+. + ..+.+||..++++..+..+.........+.+ ++..++.|+.+ ..+.+
T Consensus 44 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~ 121 (315)
T 4asc_A 44 KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMC 121 (315)
T ss_dssp TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEE
T ss_pred ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEE
Confidence 46777777773 1 2378899999887655433321111122222 56666777632 35888
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc-C-----CcEEEEecCCcccceEeeeeecCCCccEEEEEEc
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-D-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD 234 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~ 234 (479)
||..+. .+.....+.........+. -++++++.|+. + ..+.+||..+.. |..+..+......-..+.+
T Consensus 122 ~d~~~~-~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~- 195 (315)
T 4asc_A 122 YDRLSF-KWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFE--WKELAPMQTARSLFGATVH- 195 (315)
T ss_dssp EETTTT-EEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEEE-
T ss_pred ECCCCC-cEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCe--EEECCCCCCchhceEEEEE-
Confidence 998775 2333332222111122222 35677778876 2 468899987643 4444333322222223333
Q ss_pred cCCCEEEEeeCCC-----eEEEEecc
Q psy14815 235 RIGSRLATCSDDA-----TVKIWKEY 255 (479)
Q Consensus 235 ~~~~~l~s~~~dg-----~i~iwd~~ 255 (479)
+++.++.|+.++ .+.+||+.
T Consensus 196 -~~~iyv~GG~~~~~~~~~~~~yd~~ 220 (315)
T 4asc_A 196 -DGRIIVAAGVTDTGLTSSAEVYSIT 220 (315)
T ss_dssp -TTEEEEEEEECSSSEEEEEEEEETT
T ss_pred -CCEEEEEeccCCCCccceEEEEECC
Confidence 566777777554 47777763
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.067 Score=49.22 Aligned_cols=196 Identities=11% Similarity=0.002 Sum_probs=99.0
Q ss_pred CCCEEEEEEC----------CCeEEEEECCCCeEEEeEEEe-CCCCcEEEEEEcCCCCEEEEEeCC--------------
Q psy14815 101 CGNFIASASF----------DATTAVWDKRSGQFECNATLE-GHENEVKSVTWSKNGQFLATCSRD-------------- 155 (479)
Q Consensus 101 ~~~~l~t~~~----------dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~~d-------------- 155 (479)
++.+++.|+. -..+.+||..+.++..+..+. .......++. .+++.++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~ 142 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNEA 142 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcCCCcCcccccchhhc
Confidence 4556666654 146899999999876655443 2112222232 467777788754
Q ss_pred -------------------------CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc------CCcEE
Q psy14815 156 -------------------------KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY------DDTVK 204 (479)
Q Consensus 156 -------------------------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~------dg~i~ 204 (479)
..+.+||..+. .+..+..+......-.+++.. ++++++.|+. ...+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~ 220 (357)
T 2uvk_A 143 GKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQ-QWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVF 220 (357)
T ss_dssp TTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTT-EEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEE
T ss_pred CCcccchhhhhhhhccccccccCCcccEEEEeCCCC-cEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceE
Confidence 46889998775 333333322111111223332 5677777764 34577
Q ss_pred EEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCC----------------------CeEEEEeccCCCCCCC
Q psy14815 205 LFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD----------------------ATVKIWKEYKPGNSAG 262 (479)
Q Consensus 205 i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----------------------g~i~iwd~~~~~~~~~ 262 (479)
.||++.....|..+..+..........+...+++.++.|+.+ ..+.+||+..
T Consensus 221 ~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~------ 294 (357)
T 2uvk_A 221 ELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHN------ 294 (357)
T ss_dssp EEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-------
T ss_pred EEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCC------
Confidence 788743444555544432221111111122246666666632 2467777642
Q ss_pred CCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCC------eEEEcccCCCC
Q psy14815 263 IPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD------AIRIFKENPEA 316 (479)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg------~i~vw~~~~~~ 316 (479)
..|..+..+... ...-.++ ..++++++.|+.++ .|.+++++.++
T Consensus 295 -------~~W~~~~~~p~~-r~~~~~~--~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~ 344 (357)
T 2uvk_A 295 -------GKWDKSGELSQG-RAYGVSL--PWNNSLLIIGGETAGGKAVTDSVLITVKDNK 344 (357)
T ss_dssp ---------CEEEEECSSC-CBSSEEE--EETTEEEEEEEECGGGCEEEEEEEEEC-CCS
T ss_pred -------CceeeCCCCCCC-cccceeE--EeCCEEEEEeeeCCCCCEeeeEEEEEEcCcE
Confidence 345555444332 1111222 23677888887653 35556777766
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=97.10 E-value=0.15 Score=45.83 Aligned_cols=191 Identities=14% Similarity=0.185 Sum_probs=100.5
Q ss_pred CCCEEEEEEC----C-----CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEEEeCCC
Q psy14815 101 CGNFIASASF----D-----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVWVWEVGEE 166 (479)
Q Consensus 101 ~~~~l~t~~~----d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~vwd~~~~ 166 (479)
++.+++.|+. + ..+.+||..++++..+..+........++.+ +++.++.|+.+ ..+.+||..+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 4556666654 2 4688999999887655444332222223333 56677776643 35888998765
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEEcC-----CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASASYD-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 241 (479)
.+..+..+.........+.+ ++++++.|+.+ ..+.+||..+.. |..+..+.........+.+ +++.++
T Consensus 148 -~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~~~iyv 220 (308)
T 1zgk_A 148 -EWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNE--WRMITAMNTIRSGAGVCVL--HNCIYA 220 (308)
T ss_dssp -EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEEE--TTEEEE
T ss_pred -eEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCe--EeeCCCCCCccccceEEEE--CCEEEE
Confidence 23333222221122222222 57777777754 458889987543 3443333322222223333 566677
Q ss_pred EeeCC-----CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC-----CeEEEcc
Q psy14815 242 TCSDD-----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD-----DAIRIFK 311 (479)
Q Consensus 242 s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d-----g~i~vw~ 311 (479)
.|+.+ ..+.+||+... .|..+..+... ......+.+ ++++++.|+.+ ..+.+||
T Consensus 221 ~GG~~~~~~~~~v~~yd~~~~-------------~W~~~~~~p~~-r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd 284 (308)
T 1zgk_A 221 AGGYDGQDQLNSVERYDVETE-------------TWTFVAPMKHR-RSALGITVH--QGRIYVLGGYDGHTFLDSVECYD 284 (308)
T ss_dssp ECCBCSSSBCCCEEEEETTTT-------------EEEECCCCSSC-CBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEE
T ss_pred EeCCCCCCccceEEEEeCCCC-------------cEEECCCCCCC-ccceEEEEE--CCEEEEEcCcCCCcccceEEEEc
Confidence 77654 45888887432 33333222211 111112222 56777777654 4577888
Q ss_pred cCCCC
Q psy14815 312 ENPEA 316 (479)
Q Consensus 312 ~~~~~ 316 (479)
..+.+
T Consensus 285 ~~~~~ 289 (308)
T 1zgk_A 285 PDTDT 289 (308)
T ss_dssp TTTTE
T ss_pred CCCCE
Confidence 77654
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.2 Score=45.95 Aligned_cols=30 Identities=13% Similarity=0.350 Sum_probs=22.2
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEec
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVM 40 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~ 40 (479)
-...+.|+|.|+|++|+.+...|.|++++.
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~ 46 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLRGGELRHWQA 46 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEETTTEEEEEET
T ss_pred CCCcEEEEEcCCCCEEEEEeCCceEEEEeC
Confidence 345689999999983444556788988874
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.24 Score=45.53 Aligned_cols=248 Identities=9% Similarity=-0.006 Sum_probs=124.0
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEE-EeEEE----eCCCCcEEEEEEcCC---CCEEEEEeC--------
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE-CNATL----EGHENEVKSVTWSKN---GQFLATCSR-------- 154 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~-~~~~~----~~~~~~v~~l~~~~~---~~~l~~~~~-------- 154 (479)
.....|+|.|+|+.++.+...|.|++++.. ++.. .+..+ .........++++|+ +..|+++..
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 456899999999834455667999999853 3311 11111 112345789999996 455555432
Q ss_pred CCcEEEEEeCCCC-ce---eee-eeee---ccccceeEEEEecCCCEEEEEEc-------------CCcEEEEecCCccc
Q psy14815 155 DKSVWVWEVGEED-EY---ECA-AVIN---AHIQDVKKVRFHPFDNILASASY-------------DDTVKLFKEDKAEA 213 (479)
Q Consensus 155 dg~i~vwd~~~~~-~~---~~~-~~~~---~~~~~v~~l~~~~~~~~l~~~~~-------------dg~i~i~d~~~~~~ 213 (479)
...|..|+..... .. +.+ ..+. ........+.|.|+|.+.++.+. .|.|.-++.+..-.
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 2356667765431 11 111 1111 11122457999999976666443 24576677653210
Q ss_pred c----------eEeeeeecCCCccEEEEEEccCCCEEEEeeC--CCeEEEEeccCCCCCC-------------CCCCC--
Q psy14815 214 D----------WINFATLKSHTSTVWSLAFDRIGSRLATCSD--DATVKIWKEYKPGNSA-------------GIPTP-- 266 (479)
Q Consensus 214 ~----------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~-------------~~~~~-- 266 (479)
. ...+. -.++ .....++|+|....|+++.. ++.=.|.-+..+...- .++..
T Consensus 177 ~~npf~~~~~~~~~i~-a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~ 254 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIW-SYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKG 254 (353)
T ss_dssp TTCTTTTSTTSCTTEE-EECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCB
T ss_pred CCCCCcCCCCCCccEE-EEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccC
Confidence 0 00011 1123 23678999994334444332 2222333332222100 00000
Q ss_pred -CCCCceEEEEEEeccccccEEEEEecC-------CCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccce
Q psy14815 267 -DNDSVWKCVCTLSGHHGRTIYDISWCH-------LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDV 338 (479)
Q Consensus 267 -~~~~~~~~~~~~~~~~~~~i~~l~~~~-------~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v 338 (479)
.......++..+.. ......+.|.. ++.++++.-..+.|...+++.++ ... ...++......+
T Consensus 255 ~~~~~~~~P~~~~~~--~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~------~~~-~~~~~~~~~~rp 325 (353)
T 2g8s_A 255 EIVAGTEQPVFYWKD--SPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDK------VTE-DGRILTDRGQRI 325 (353)
T ss_dssp SSCTTSCCCSEEESS--CCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTE------EEE-EEEESGGGCCCE
T ss_pred CCCCCccCCeEEeCC--CcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCe------Eee-eEEcccCCCCce
Confidence 00000112222322 23567788864 46677766667788777776432 000 111222223578
Q ss_pred eEEEecCCCCCC
Q psy14815 339 NCVAWNPVVPEP 350 (479)
Q Consensus 339 ~~~~~sp~~~~l 350 (479)
..+++.|||...
T Consensus 326 ~~v~~~pdG~ly 337 (353)
T 2g8s_A 326 RDVRTGPDGYLY 337 (353)
T ss_dssp EEEEECTTSCEE
T ss_pred eEEEECCCCcEE
Confidence 899999999744
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.25 Score=45.14 Aligned_cols=191 Identities=11% Similarity=0.132 Sum_probs=107.3
Q ss_pred ceEEEEECCCCCeEEEee------------CCCcEEEEeccccc-cccc--ccC--------CC---------ccc-eEE
Q psy14815 13 RVWNVSWNPQGTMISSCG------------EDKNIRLWVMVIRE-PYEK--LHG--------LP---------VET-SLR 59 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~------------~dg~v~iwd~~~~~-~~~~--~~~--------~~---------~~~-~~~ 59 (479)
....+...|+|..+++++ .+|.|.++|..+.. .... +.+ +| ++. .+.
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 455677888876555552 68999999987321 1111 111 11 111 122
Q ss_pred Eee---cCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEE-----------------CCCeEEEEEC
Q psy14815 60 QLV---EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS-----------------FDATTAVWDK 119 (479)
Q Consensus 60 ~~~---~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~-----------------~dg~i~iwd~ 119 (479)
.+. .+.++.+|+++..+.............-...+.+.+.++|.+.++.. ..|.|.-+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 221 13455666655433333333333223345788999999998777654 1245555554
Q ss_pred CCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEEeCCCCceeeeeeeeccccceeEEEEec-CCCEEEEE
Q psy14815 120 RSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASA 197 (479)
Q Consensus 120 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~ 197 (479)
++.. .... .-...+.++|+||++.|+++. ..+.|..|++...........+ ......-.+++.+ +|++.+++
T Consensus 211 --~~~~--~~~~-~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 211 --NDVR--VVAE-GFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp --TCCE--EEEE-EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEE
T ss_pred --CeEE--Eeec-CCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEe
Confidence 3322 1122 224568999999998887775 4678999999754333333333 2244567889999 59887766
Q ss_pred EcC-CcEEEEecC
Q psy14815 198 SYD-DTVKLFKED 209 (479)
Q Consensus 198 ~~d-g~i~i~d~~ 209 (479)
..+ +.|..|+..
T Consensus 285 ~~~g~~v~~~~P~ 297 (355)
T 3sre_A 285 HPNGMRIFFYDAE 297 (355)
T ss_dssp ESCHHHHHSCCTT
T ss_pred cCCceEEEEECCC
Confidence 544 345445544
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=96.86 E-value=0.048 Score=58.35 Aligned_cols=228 Identities=10% Similarity=0.109 Sum_probs=128.9
Q ss_pred ECCCCCeEEEeeCCCcEEEEecccccccccccCCCc-------cceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC
Q psy14815 19 WNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPV-------ETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR 91 (479)
Q Consensus 19 ~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~-------~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 91 (479)
.+|..+.||.=. ..++.|+|+++.+.++.+.-..+ +...+....+..|.-|++.....+.........-...
T Consensus 73 MnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~ 151 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGC 151 (1630)
T ss_pred cCCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCCCeeEEEcCCeEEEeccCCCCccHHHHhcchhcccC
Confidence 456666666543 67899999999888877655432 3445566678889999997422221111111111146
Q ss_pred cEEEEEECCCCCEEEEEE-------CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC--C-CCEEEEEeC---CCcE
Q psy14815 92 TIRETAWSPCGNFIASAS-------FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK--N-GQFLATCSR---DKSV 158 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~--~-~~~l~~~~~---dg~i 158 (479)
.|..-..+++.++++..| -.|.+.+|..+.+ ..+.+++|......+.... . ...++.+.. .+.+
T Consensus 152 QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~---~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kL 228 (1630)
T 1xi4_A 152 QIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK---VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKL 228 (1630)
T ss_pred eeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc---cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceE
Confidence 788888888888877554 3488999998876 3456667765444443321 1 123332222 2688
Q ss_pred EEEEeCCC----Cce--eeeeeeec---cccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEE
Q psy14815 159 WVWEVGEE----DEY--ECAAVINA---HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW 229 (479)
Q Consensus 159 ~vwd~~~~----~~~--~~~~~~~~---~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~ 229 (479)
++-++... ... +....+.. ...-.-++..++.-..+..-+.-|.+.+||+.++.. +..-+-...+|.
T Consensus 229 hi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~----i~~~ris~~~iF 304 (1630)
T 1xi4_A 229 HIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC----IYMNRISGETIF 304 (1630)
T ss_pred EEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchh----hhhccccCCceE
Confidence 88888543 110 00001111 112234677777777888889999999999998775 222222333343
Q ss_pred EEEEccCCCEEEEeeCCCeEEEEec
Q psy14815 230 SLAFDRIGSRLATCSDDATVKIWKE 254 (479)
Q Consensus 230 ~~~~~~~~~~l~s~~~dg~i~iwd~ 254 (479)
..+-+....-++.....|.|.--.+
T Consensus 305 ~~~~~~~~~g~~~vnr~G~vl~v~v 329 (1630)
T 1xi4_A 305 VTAPHEATAGIIGVNRKGQVLSVCV 329 (1630)
T ss_pred EeccCCCCCceEEEcCCceEEEEEE
Confidence 3333332223333445555544444
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.28 Score=44.63 Aligned_cols=250 Identities=14% Similarity=0.077 Sum_probs=129.6
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe----CCCCcEEEEEEcCC---CCEEEEE---eCCCcEE
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE----GHENEVKSVTWSKN---GQFLATC---SRDKSVW 159 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~----~~~~~v~~l~~~~~---~~~l~~~---~~dg~i~ 159 (479)
-...+.++|.|+|.++++--..|.|++++..+++...+..+. ........|+++|+ +..|+.. ..++.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 456789999999987777665899999987666543333221 23456789999995 3445443 2345566
Q ss_pred EEEeCCCC----c---eee-eeeee-ccccceeEEEEecCCCEEEEEEc-------------CCcEEEEecCCcccce--
Q psy14815 160 VWEVGEED----E---YEC-AAVIN-AHIQDVKKVRFHPFDNILASASY-------------DDTVKLFKEDKAEADW-- 215 (479)
Q Consensus 160 vwd~~~~~----~---~~~-~~~~~-~~~~~v~~l~~~~~~~~l~~~~~-------------dg~i~i~d~~~~~~~~-- 215 (479)
-|...... . .+. +..+. ........|.|.|+|.+.++.+. .|.|.-++.+..-...
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nP 190 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNP 190 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCS
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCC
Confidence 66665421 1 111 11121 11223467999999987777542 3555555554321000
Q ss_pred ---EeeeeecCCCccEEEEEEccCCCEEEEe-eCCCeEEEEeccCCCCCCCCCCCC----CCCceEEEEEEeccccccEE
Q psy14815 216 ---INFATLKSHTSTVWSLAFDRIGSRLATC-SDDATVKIWKEYKPGNSAGIPTPD----NDSVWKCVCTLSGHHGRTIY 287 (479)
Q Consensus 216 ---~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~ 287 (479)
..+. -.+|.. ...++|+|++..+++- +.|+.-.|--+..+.+. ..+... ......++..+..+ .....
T Consensus 191 f~~~~i~-a~G~RN-p~Gla~dp~G~L~~~d~g~~~~deln~i~~G~ny-GwP~~~g~~~~~~~~~P~~~~~~~-~~ap~ 266 (347)
T 3das_A 191 FPGSPVY-SYGHRN-VQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNY-GWPEAEGKGGGSGFHDPVAQWSTD-EASPS 266 (347)
T ss_dssp STTCCEE-EBCCSB-CCEEEECTTCCEEEEECCSSSCEEEEEECTTCBC-CTTTCCSSCCCTTCCCCSEEECTT-TCCEE
T ss_pred CCCCeEE-eeCCCC-cceEEECCCCCEEEEecCCCCCceeeEEcCCCEe-cCCcccCCCCCccccCCcEecCCC-CCCCc
Confidence 0011 124443 4578999987765543 23333333333333221 111100 00111222333322 23556
Q ss_pred EEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 288 DISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 288 ~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
.++|. ++.++...-..+.|....+...... .. ...++.+..+.+..++..|||..+
T Consensus 267 G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~---~~---~e~~l~~~~gR~~dv~~~pDG~ly 322 (347)
T 3das_A 267 GIAYA-EGSVWMAGLRGERLWRIPLKGTAAA---AD---PQAFLEGEYGRLRTVAPAGGDKLW 322 (347)
T ss_dssp EEEEE-TTEEEEEESTTCSEEEEEEETTEES---SC---CEEESTTTSSCEEEEEEEETTEEE
T ss_pred ceEEE-cCceeeccccCCEEEEEEecCCcee---cc---eEEeecCCCCCccEEEECCCCcEE
Confidence 77776 3555555544555555555433200 00 011223345689999999999754
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=96.80 E-value=0.33 Score=45.16 Aligned_cols=255 Identities=11% Similarity=0.126 Sum_probs=146.5
Q ss_pred CCCcEEEEeccccccccc--ccC-----CCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCC
Q psy14815 31 EDKNIRLWVMVIREPYEK--LHG-----LPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGN 103 (479)
Q Consensus 31 ~dg~v~iwd~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~ 103 (479)
.+..|.|-|+..+....+ +.. +|.. .+++.-...++.++|++. +...+.. .....|.-=.|-.+ +
T Consensus 46 ~~~~vvIiDl~~~~~~~rrpi~AdsAIMnP~~-~iiALrag~~lQiFnle~---K~klks~---~~~e~VvfWkWis~-~ 117 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRPISADSAIMNPAS-KVIALKAGKTLQIFNIEM---KSKMKAH---TMTDDVTFWKWISL-N 117 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEECCCSEEEECSSS-SCEEEEETTEEEEEETTT---TEEEEEE---ECSSCCCEEEEEET-T
T ss_pred CCCeEEEEECCCCCcceecccccceeeeCCCC-cEEEEecCCeEEEEchHH---hhhhcce---ecCCCceEEEecCC-C
Confidence 344788899887655432 111 2333 456666689999999983 1111111 12345665666533 4
Q ss_pred EEEEEECCCeEEEEECCCCeEEEeEEEeCCC----CcEEEEEEcCCCCEEEEEeC-------CCcEEEEEeCCCCceeee
Q psy14815 104 FIASASFDATTAVWDKRSGQFECNATLEGHE----NEVKSVTWSKNGQFLATCSR-------DKSVWVWEVGEEDEYECA 172 (479)
Q Consensus 104 ~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~----~~v~~l~~~~~~~~l~~~~~-------dg~i~vwd~~~~~~~~~~ 172 (479)
.|+-.+ +..|.-|++.... .+...+..|. ..|..-..+++.++++..+- .|.+.+|..+.. ..
T Consensus 118 ~l~lVT-~taVyHWsi~~~s-~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~----~s 191 (494)
T 1bpo_A 118 TVALVT-DNAVYHWSMEGES-QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK----VS 191 (494)
T ss_dssp EEEEEC-SSEEEEEESSSSC-CCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC----CE
T ss_pred eEEEEc-CCeeEEecccCCC-CchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc----cc
Confidence 565555 3689999997532 3556666554 35666667788887664432 477899998764 44
Q ss_pred eeeeccccceeEEEEecCC---CEEEEEEcC---CcEEEEecCCc---ccce--Eeeeee---cCCCccEEEEEEccCCC
Q psy14815 173 AVINAHIQDVKKVRFHPFD---NILASASYD---DTVKLFKEDKA---EADW--INFATL---KSHTSTVWSLAFDRIGS 238 (479)
Q Consensus 173 ~~~~~~~~~v~~l~~~~~~---~~l~~~~~d---g~i~i~d~~~~---~~~~--~~~~~~---~~~~~~v~~~~~~~~~~ 238 (479)
+.+.+|......+....+. .+++.+... +.+++.++... ...+ +..... ..-..-..++..++...
T Consensus 192 Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kyg 271 (494)
T 1bpo_A 192 QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD 271 (494)
T ss_dssp EEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTT
T ss_pred chheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCC
Confidence 5677776655544443211 344444443 78999998654 1111 111111 11233455788888888
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCC
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
.++.-+.-|.|++||+.++ .++..-+-. ..+|...+-+....=++.....|.|.--.++..
T Consensus 272 viyviTK~G~i~lyDleTg---------------t~i~~nrIs-~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 272 VVFLITKYGYIHLYDLETG---------------TCIYMNRIS-GETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp EEEEEETTSEEEEEETTTC---------------CEEEEEECC-SSCEEEEEEETTTTEEEEEETTCEEEEEEECTT
T ss_pred EEEEEecCceEEEEecccc---------------eeeeeeccc-CCceEEecccCCCCcEEEEccCceEEEEEEccc
Confidence 9999999999999999544 344433332 334444444333333333445555554444443
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.28 Score=43.70 Aligned_cols=146 Identities=16% Similarity=0.216 Sum_probs=80.3
Q ss_pred CCCEEEEEECCC-----eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-------CcEEEEEeCCCCc
Q psy14815 101 CGNFIASASFDA-----TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-------KSVWVWEVGEEDE 168 (479)
Q Consensus 101 ~~~~l~t~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-------g~i~vwd~~~~~~ 168 (479)
++..++.|+.++ .+.+||+.++++..+..+........++.+ +++.++.|+.+ ..+.+||+.+. .
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~-~ 184 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTN-E 184 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTT-E
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCC-c
Confidence 566777777553 688999999987665444322222222222 56666666543 35888998765 2
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEEEcC-----CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASASYD-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
+..+..+.........+.+ ++++++.|+.+ ..+.+||..+.. |..+..+.........+.+ +++.++.|
T Consensus 185 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~r~~~~~~~~--~~~i~v~G 258 (302)
T 2xn4_A 185 WTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNA--WRQVADMNMCRRNAGVCAV--NGLLYVVG 258 (302)
T ss_dssp EEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred EEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCC--EeeCCCCCCccccCeEEEE--CCEEEEEC
Confidence 3333222221111222222 57788888764 368899987643 4444333222222222222 56677777
Q ss_pred eCCC-----eEEEEecc
Q psy14815 244 SDDA-----TVKIWKEY 255 (479)
Q Consensus 244 ~~dg-----~i~iwd~~ 255 (479)
+.++ .+.+||..
T Consensus 259 G~~~~~~~~~v~~yd~~ 275 (302)
T 2xn4_A 259 GDDGSCNLASVEYYNPT 275 (302)
T ss_dssp CBCSSSBCCCEEEEETT
T ss_pred CcCCCcccccEEEEcCC
Confidence 7553 47788764
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.32 Score=44.27 Aligned_cols=248 Identities=11% Similarity=0.045 Sum_probs=123.6
Q ss_pred cccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
.-...+.|+|.|||+++++--..|.|++++...+... .+.. + .......
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~-~v~~--------------------~----------~~v~~~g 78 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKT-ELGE--------------------V----------PGVSPSG 78 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE-EEEE--------------------C----------TTCCCBT
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEe-eecc--------------------c----------CceeecC
Confidence 3456789999999998777765889988875433321 0000 0 0001123
Q ss_pred CCcEEEEEECCC---CCEEEEE-E--CCCeEEEEECCCC-----e---EEEe-EEEeC-CCCcEEEEEEcCCCCEEEEEe
Q psy14815 90 QRTIRETAWSPC---GNFIASA-S--FDATTAVWDKRSG-----Q---FECN-ATLEG-HENEVKSVTWSKNGQFLATCS 153 (479)
Q Consensus 90 ~~~v~~v~~~~~---~~~l~t~-~--~dg~i~iwd~~~~-----~---~~~~-~~~~~-~~~~v~~l~~~~~~~~l~~~~ 153 (479)
......|+++|+ +..|... + .++.|.-|.+..+ + .+.+ ..+.. ....-..|.|.|||.+.++.+
T Consensus 79 ~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 79 EGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp TBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred CCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 457788999985 3444432 2 3456666665541 1 1122 22321 122346799999998766654
Q ss_pred C-------------CCcEEEEEeCCCC----ceeeeeee-eccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCccc-
Q psy14815 154 R-------------DKSVWVWEVGEED----EYECAAVI-NAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEA- 213 (479)
Q Consensus 154 ~-------------dg~i~vwd~~~~~----~~~~~~~~-~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~- 213 (479)
. .|.|.-.+....- .......+ .+|. ....++|+|++.+.++=. .++.=.|.-+..+..
T Consensus 159 d~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~ny 237 (347)
T 3das_A 159 ESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNY 237 (347)
T ss_dssp CTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBC
T ss_pred CCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEe
Confidence 2 2455444543220 00000111 1332 356899999876554432 222222222222210
Q ss_pred c-------------eEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEec
Q psy14815 214 D-------------WINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG 280 (479)
Q Consensus 214 ~-------------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (479)
. ..++..+..+......++|. ++..+...-..+.|....+...... .+....+.+
T Consensus 238 GwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~-----------~~~e~~l~~ 305 (347)
T 3das_A 238 GWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAA-----------ADPQAFLEG 305 (347)
T ss_dssp CTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEES-----------SCCEEESTT
T ss_pred cCCcccCCCCCccccCCcEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCCcee-----------cceEEeecC
Confidence 0 01122222222355677776 3555555444555655555432110 011122223
Q ss_pred cccccEEEEEecCCCCeEEEEe
Q psy14815 281 HHGRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 281 ~~~~~i~~l~~~~~~~~l~~~~ 302 (479)
. ...+.+++..|||.++++..
T Consensus 306 ~-~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 306 E-YGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp T-SSCEEEEEEEETTEEEEEEC
T ss_pred C-CCCccEEEECCCCcEEEEEc
Confidence 2 45789999999998766543
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=96.70 E-value=0.32 Score=43.57 Aligned_cols=145 Identities=15% Similarity=0.195 Sum_probs=80.1
Q ss_pred CCCEEEEEECC-----CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEEEeCCCCcee
Q psy14815 101 CGNFIASASFD-----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVWVWEVGEEDEYE 170 (479)
Q Consensus 101 ~~~~l~t~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~ 170 (479)
++..++.|+.+ ..+.+||..++++.....+......-.++.+ ++..++.|+.+ ..+.+||+.+. .+.
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~ 197 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERN-EWR 197 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT-EEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCC-eEe
Confidence 56666666543 4689999999887655444322222223333 56777777654 45888998765 233
Q ss_pred eeeeeeccccceeEEEEecCCCEEEEEEcC-----CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeC
Q psy14815 171 CAAVINAHIQDVKKVRFHPFDNILASASYD-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 245 (479)
Q Consensus 171 ~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 245 (479)
.+..+.........+.+ ++++++.|+.+ ..+.+||+.+.. |..+..+.........+.+ +++.++.|+.
T Consensus 198 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~ 271 (308)
T 1zgk_A 198 MITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETET--WTFVAPMKHRRSALGITVH--QGRIYVLGGY 271 (308)
T ss_dssp ECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred eCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCc--EEECCCCCCCccceEEEEE--CCEEEEEcCc
Confidence 33222221122222333 57788888765 468999987643 4444333322222222333 4666677764
Q ss_pred C-----CeEEEEec
Q psy14815 246 D-----ATVKIWKE 254 (479)
Q Consensus 246 d-----g~i~iwd~ 254 (479)
+ ..+.+||+
T Consensus 272 ~~~~~~~~v~~yd~ 285 (308)
T 1zgk_A 272 DGHTFLDSVECYDP 285 (308)
T ss_dssp CSSCBCCEEEEEET
T ss_pred CCCcccceEEEEcC
Confidence 4 35667776
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.34 Score=43.29 Aligned_cols=146 Identities=14% Similarity=0.122 Sum_probs=81.1
Q ss_pred CCCEEEEEECC------CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC---------CCcEEEEEeCC
Q psy14815 101 CGNFIASASFD------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR---------DKSVWVWEVGE 165 (479)
Q Consensus 101 ~~~~l~t~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~---------dg~i~vwd~~~ 165 (479)
++.+++.|+.+ ..+.+||..++++.....+......-.++.+ +++.++.|+. -..+.+||+.+
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence 56677777755 4699999999987655443322222222222 5666666654 34588999887
Q ss_pred CCceeeeeeeeccccceeEEEEecCCCEEEEEEcC-----CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEE
Q psy14815 166 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYD-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 166 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 240 (479)
. .+..+..+.........+.+ ++++++.|+.+ ..+.+||..+.. |..+..+.........+.+ +++.+
T Consensus 179 ~-~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~~~i~ 251 (306)
T 3ii7_A 179 E-TWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNE--WKMVSPMPWKGVTVKCAAV--GSIVY 251 (306)
T ss_dssp T-EEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTE--EEECCCCSCCBSCCEEEEE--TTEEE
T ss_pred C-eEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCc--EEECCCCCCCccceeEEEE--CCEEE
Confidence 5 33333222221111222222 56777777754 358889987643 4444433332223333333 56677
Q ss_pred EEeeCC-----CeEEEEecc
Q psy14815 241 ATCSDD-----ATVKIWKEY 255 (479)
Q Consensus 241 ~s~~~d-----g~i~iwd~~ 255 (479)
+.|+.+ ..+.+||..
T Consensus 252 v~GG~~~~~~~~~~~~yd~~ 271 (306)
T 3ii7_A 252 VLAGFQGVGRLGHILEYNTE 271 (306)
T ss_dssp EEECBCSSSBCCEEEEEETT
T ss_pred EEeCcCCCeeeeeEEEEcCC
Confidence 777744 467778863
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.36 Score=42.94 Aligned_cols=146 Identities=13% Similarity=0.208 Sum_probs=82.3
Q ss_pred CCCEEEEEECC-----CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEEEeCCCCcee
Q psy14815 101 CGNFIASASFD-----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVWVWEVGEEDEYE 170 (479)
Q Consensus 101 ~~~~l~t~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~ 170 (479)
++..++.|+.+ ..+.+||+.++++..+..+......-.++.+ +++.++.|+.+ ..+.+||+.+. .+.
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~-~W~ 188 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTG-HWT 188 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT-EEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCC-cEE
Confidence 56667777643 4789999999987766554432222222222 66777777654 45888998775 333
Q ss_pred eeeeeeccccceeEEEEecCCCEEEEEEcC-----CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeC
Q psy14815 171 CAAVINAHIQDVKKVRFHPFDNILASASYD-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 245 (479)
Q Consensus 171 ~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 245 (479)
.+..+.........+.+ ++++++.|+.+ ..+.+||..+.. |..+..+.........+.+ +++.++.|+.
T Consensus 189 ~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~ 262 (301)
T 2vpj_A 189 NVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDS--WTTVTSMTTPRCYVGATVL--RGRLYAIAGY 262 (301)
T ss_dssp EECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred eCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCc--EEECCCCCCcccceeEEEE--CCEEEEEcCc
Confidence 33222221111222222 56778888764 468899987643 4444333322222223333 5667777765
Q ss_pred C-----CeEEEEecc
Q psy14815 246 D-----ATVKIWKEY 255 (479)
Q Consensus 246 d-----g~i~iwd~~ 255 (479)
+ ..+.+||..
T Consensus 263 ~~~~~~~~v~~yd~~ 277 (301)
T 2vpj_A 263 DGNSLLSSIECYDPI 277 (301)
T ss_dssp CSSSBEEEEEEEETT
T ss_pred CCCcccccEEEEcCC
Confidence 5 356777763
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=96.43 E-value=0.19 Score=47.91 Aligned_cols=109 Identities=7% Similarity=0.092 Sum_probs=65.9
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC------CCCcEEEEEEcCC---CCEEEEEeC-------
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG------HENEVKSVTWSKN---GQFLATCSR------- 154 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~------~~~~v~~l~~~~~---~~~l~~~~~------- 154 (479)
...+.++|.|+|+++++-...+.|++++..+++...+..+.. .......|+|+|+ +..|+++..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 466799999999877765544579988876665443433332 2456779999995 555555543
Q ss_pred ------CCcEEEEEeCCCC-c---eee-eeeee-ccccceeEEEEecCCCEEEEEEc
Q psy14815 155 ------DKSVWVWEVGEED-E---YEC-AAVIN-AHIQDVKKVRFHPFDNILASASY 199 (479)
Q Consensus 155 ------dg~i~vwd~~~~~-~---~~~-~~~~~-~~~~~v~~l~~~~~~~~l~~~~~ 199 (479)
...|..|+..... . .+. +..+. ........|+|.|+|.+.++.+.
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 1346666654321 1 111 11121 11234688999999987776553
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.91 Score=45.16 Aligned_cols=306 Identities=8% Similarity=-0.038 Sum_probs=149.4
Q ss_pred cceEEEEECCCCCeE-EEeeCCCcEEEEecccccccccccCCCccceEEEe-ecCCcEEEecCCCCCCce------eeeE
Q psy14815 12 GRVWNVSWNPQGTMI-SSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQL-VEDKNIRLWGKESFGNKF------TAKA 83 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l-~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~w~~~~~~~~~------~~~~ 83 (479)
.....+++.+.+..| ++-...+.|.+.++........+...-..+.-+++ ...+.+.+-|........ ....
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~ 163 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF 163 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE
Confidence 467889999865544 44456788999998654332222111111222222 223333333322100000 0011
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEE-CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEE-eCCCcEEEE
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC-SRDKSVWVW 161 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~vw 161 (479)
......-.....+++++++..|+.+. ..+.|...|+.......+ ..+.......+++..+ .++.+ ...+.|...
T Consensus 164 ~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~--~~~~~~~P~gi~~~~~--~ly~td~~~~~V~~~ 239 (619)
T 3s94_A 164 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV--VKGSLPHPFALTLFED--ILYWTDWSTHSILAC 239 (619)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC-----------CCCEEESSS--EEEEECTTTCSEEEE
T ss_pred EEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEE--EeCCCCCceEEEEeCC--EEEEecCCCCEEEEE
Confidence 11122345678999998766666654 457899999876542222 1211222346677544 44444 456778888
Q ss_pred EeCCCCceeeee----------eeecc------------ccceeEEEE-----------ecCC---------------CE
Q psy14815 162 EVGEEDEYECAA----------VINAH------------IQDVKKVRF-----------HPFD---------------NI 193 (479)
Q Consensus 162 d~~~~~~~~~~~----------~~~~~------------~~~v~~l~~-----------~~~~---------------~~ 193 (479)
|..+++....+. .+... .+....+++ .|.| .+
T Consensus 240 d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~ 319 (619)
T 3s94_A 240 NKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATEL 319 (619)
T ss_dssp ESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEE
T ss_pred ECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceE
Confidence 876553221110 00000 001111221 1111 12
Q ss_pred EEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCce
Q psy14815 194 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVW 272 (479)
Q Consensus 194 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 272 (479)
|+.+ ..+.|+..++....... ....+. .-..+..++|++.+..|+.+. ..+.|+.+++.....
T Consensus 320 Ll~~-~~~~i~~i~l~~~~~~~-~~~~~~-~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~------------- 383 (619)
T 3s94_A 320 LLLA-RRTDLRRISLDTPDFTD-IVLQLE-DIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGS------------- 383 (619)
T ss_dssp EEEE-ESSCEEEEESSSTTCCC-EECCCS-CCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-------------
T ss_pred EEEE-cccceEEEecCCCccce-eEEecc-ccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCcc-------------
Confidence 3333 34567777776543211 111111 223467899998666665544 567888888643211
Q ss_pred EEEEEEeccccccEEEEEecCC-CCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCC
Q psy14815 273 KCVCTLSGHHGRTIYDISWCHL-TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 273 ~~~~~~~~~~~~~i~~l~~~~~-~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 350 (479)
. ..+.. .-.....+++... +.+..+-+..+.|.+.+++... ...+....-.....+++.|....|
T Consensus 384 ~--~v~~~-~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~----------~~~l~~~~l~~P~~iavdp~~G~l 449 (619)
T 3s94_A 384 Q--FVVTA-QIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM----------RKILISEDLEEPRAIVLDPMVGYM 449 (619)
T ss_dssp E--EEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS----------CEEEECTTCCSEEEEEEETTTTEE
T ss_pred E--EEEEC-CCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe----------EEEEEECCCCCeeeEEEEcCCCcE
Confidence 1 11111 1235668888864 4455555667899999887653 111111223456788888864444
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.6 Score=41.91 Aligned_cols=149 Identities=11% Similarity=0.111 Sum_probs=78.2
Q ss_pred CCCCCEEEEEEC----CC-------eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-------CcEEE
Q psy14815 99 SPCGNFIASASF----DA-------TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-------KSVWV 160 (479)
Q Consensus 99 ~~~~~~l~t~~~----dg-------~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-------g~i~v 160 (479)
..++..++.|+. ++ .+.+||..++++..+..+.........+.+ ++..++.|+.+ ..+.+
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~ 131 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLC 131 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEE
Confidence 346677777773 11 278899999887655444332222222323 56677777754 24778
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc------CCcEEEEecCCcccceEeeeeecCCCccEEEEEEc
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY------DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD 234 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~ 234 (479)
||..+. .+..+..+......- +++. .++++++.|+. -..+.+||..+.. |..+..+.........+.+
T Consensus 132 yd~~~~-~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~- 205 (318)
T 2woz_A 132 YDPVAA-KWSEVKNLPIKVYGH-NVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD--WKDLAPMKTPRSMFGVAIH- 205 (318)
T ss_dssp EETTTT-EEEEECCCSSCEESC-EEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE-
T ss_pred EeCCCC-CEeECCCCCCccccc-EEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCE--EEECCCCCCCcccceEEEE-
Confidence 888765 233322222111111 2222 35777777764 2358899987643 4444333322222222333
Q ss_pred cCCCEEEEeeCC-----CeEEEEeccC
Q psy14815 235 RIGSRLATCSDD-----ATVKIWKEYK 256 (479)
Q Consensus 235 ~~~~~l~s~~~d-----g~i~iwd~~~ 256 (479)
+++.++.|+.+ ..+.+||+..
T Consensus 206 -~~~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 206 -KGKIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp -TTEEEEEEEEETTEEEEEEEEEETTT
T ss_pred -CCEEEEEcCcCCCCccceEEEEECCC
Confidence 46666777643 3466777643
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.20 E-value=0.65 Score=41.62 Aligned_cols=187 Identities=10% Similarity=0.100 Sum_probs=95.9
Q ss_pred EEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC----C-------CcEEEEEeCCCCceeee
Q psy14815 104 FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR----D-------KSVWVWEVGEEDEYECA 172 (479)
Q Consensus 104 ~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~----d-------g~i~vwd~~~~~~~~~~ 172 (479)
+++.|+ ..+.+||..++++.. ..+..............++..++.|+. + ..+..||..+.+ +..+
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~-W~~~ 82 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSE-WLGM 82 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTE-EEEC
T ss_pred EEEEcC--CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCe-EEEC
Confidence 344454 679999999998764 333322222333333457778888873 1 127778887652 3332
Q ss_pred eeeeccccceeEEEEecCCCEEEEEEcC--------CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee
Q psy14815 173 AVINAHIQDVKKVRFHPFDNILASASYD--------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244 (479)
Q Consensus 173 ~~~~~~~~~v~~l~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 244 (479)
..+.........+.+ ++++++.|+.+ ..+.+||..+.+ |..+..+......-..+. .+++.++.|+
T Consensus 83 ~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~--~~~~iyv~GG 156 (315)
T 4asc_A 83 PPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFK--WGESDPLPYVVYGHTVLS--HMDLVYVIGG 156 (315)
T ss_dssp CCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEE--ETTEEEEECC
T ss_pred CCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCc--EeECCCCCCcccceeEEE--ECCEEEEEeC
Confidence 222211111122222 56777777743 358889987643 444433332222222222 3456666776
Q ss_pred C-C-----CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCC-----eEEEcccC
Q psy14815 245 D-D-----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD-----AIRIFKEN 313 (479)
Q Consensus 245 ~-d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg-----~i~vw~~~ 313 (479)
. + ..+.+||.... .|..+..+... ...-..+.+ ++++++.|+.++ .+.+||..
T Consensus 157 ~~~~~~~~~~~~~yd~~~~-------------~W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~ 220 (315)
T 4asc_A 157 KGSDRKCLNKMCVYDPKKF-------------EWKELAPMQTA-RSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSIT 220 (315)
T ss_dssp BCTTSCBCCCEEEEETTTT-------------EEEECCCCSSC-CBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETT
T ss_pred CCCCCcccceEEEEeCCCC-------------eEEECCCCCCc-hhceEEEEE--CCEEEEEeccCCCCccceEEEEECC
Confidence 5 2 36788886432 33333222111 111112222 567777777654 47778877
Q ss_pred CCC
Q psy14815 314 PEA 316 (479)
Q Consensus 314 ~~~ 316 (479)
+.+
T Consensus 221 ~~~ 223 (315)
T 4asc_A 221 DNK 223 (315)
T ss_dssp TTE
T ss_pred CCe
Confidence 654
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=96.11 E-value=0.17 Score=42.29 Aligned_cols=191 Identities=13% Similarity=0.108 Sum_probs=95.8
Q ss_pred CCEEEEEECCCeEEEEECCCCe---EE-EeEEEeC-CCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeee---e
Q psy14815 102 GNFIASASFDATTAVWDKRSGQ---FE-CNATLEG-HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA---A 173 (479)
Q Consensus 102 ~~~l~t~~~dg~i~iwd~~~~~---~~-~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~---~ 173 (479)
...|++...| +++.=...++. +. ....+.. -=..+..++|+|+|.+.++ .+|.+.-.+..+.....-. .
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t 80 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAK 80 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCE
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccccc
Confidence 3456666666 55554444432 10 1112211 1236789999999986666 6776655554332110000 0
Q ss_pred eee-ccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcc-cceEeeeee--cCCCccEEEEEEccCCCEEEEeeCCCeE
Q psy14815 174 VIN-AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE-ADWINFATL--KSHTSTVWSLAFDRIGSRLATCSDDATV 249 (479)
Q Consensus 174 ~~~-~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~dg~i 249 (479)
.+- .--....++.|.|+|.+.++ .||.|.-++-.+.. ..|.-.... ..-=..+..|.+.|+|...+.. |+.+
T Consensus 81 ~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 81 KIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp EEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred EecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence 110 00111478999999988777 56988777653322 111100000 1112467899999999876655 7774
Q ss_pred EEEeccCCCCCCCCCCCCCCCceE-EEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccC
Q psy14815 250 KIWKEYKPGNSAGIPTPDNDSVWK-CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 313 (479)
Q Consensus 250 ~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~ 313 (479)
+ ....+... ...|- ....+....-....-+.|.+++.+.++. +|. +|...
T Consensus 157 y--r~~~P~~~--------~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~--~Y~~~ 207 (236)
T 1tl2_A 157 Y--KALPPVSN--------QDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGK--FYEDY 207 (236)
T ss_dssp E--EECCCSST--------TCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTE--EEEES
T ss_pred E--ecCCCCCC--------CcccccccceeccCCcceEEEEEECCCCcEEEEe--CCe--EEecC
Confidence 3 32222111 11111 0111111112244557789988877666 664 44443
|
| >3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A | Back alignment and structure |
|---|
Probab=96.11 E-value=1.5 Score=44.91 Aligned_cols=195 Identities=9% Similarity=0.090 Sum_probs=110.8
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCce
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 169 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 169 (479)
...|.++....++ .|..|+.+| +..||..+.+... ........|.++.. .++ .|..++.+ -+..+|..+.+.
T Consensus 62 ~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~--~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~- 133 (758)
T 3ott_A 62 NTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQ--PETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKL- 133 (758)
T ss_dssp SSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECC--CSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCE-
T ss_pred CceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEEC--cccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeE-
Confidence 3568888776665 666677654 7899998875332 11112235777654 344 56667666 577888765421
Q ss_pred eeeeee--eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC----CCccEEEEEEccCCCEEEEe
Q psy14815 170 ECAAVI--NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS----HTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 170 ~~~~~~--~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~s~ 243 (479)
...... ......|.++...+++.+.+ |+.+ -+..|+..+... ... .... ....|.++...+++..|..|
T Consensus 134 ~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~--~~~-~~~~~~~~~~~~i~~i~~d~~~~~lWig 208 (758)
T 3ott_A 134 TSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKF--EGI-PLPVHSSQSNLFVNSLLEDTTRQCVWIG 208 (758)
T ss_dssp EEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEE--EEE-CCCCCTTCSSCCEEEEEEETTTTEEEEE
T ss_pred EEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCce--EEe-cCCCccccccceeEEEEEECCCCEEEEE
Confidence 111000 01124578888877776554 5554 477788765432 111 1111 12348888888777766666
Q ss_pred eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 244 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 244 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+. +-+..+|..... ......+. ...|.++....++.+.+. +. +-+.+++..+.+
T Consensus 209 t~-~Gl~~~~~~~~~-------------~~~~~~l~---~~~i~~i~~d~~g~lWig-T~-~Gl~~~~~~~~~ 262 (758)
T 3ott_A 209 TE-GYLFQYFPSTGQ-------------IKQTEAFH---NNSIKSLALDGNGDLLAG-TD-NGLYVYHNDTTP 262 (758)
T ss_dssp EE-EEEEEEETTTTE-------------EEEEEEEE---EEEEEEEEECTTCCEEEE-ET-TEEEEECCTTSC
T ss_pred EC-CCCeEEcCCCCe-------------EEeccCCC---CCeEEEEEEcCCCCEEEE-eC-CceeEEecCCCc
Confidence 64 457788753221 11111221 346888888888876654 44 457788776543
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=95.89 E-value=1.3 Score=42.23 Aligned_cols=114 Identities=8% Similarity=0.047 Sum_probs=60.9
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
-...+.|+|.|+|+++++-...+.|++++..++... .+. ++.. ........
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~-~~~--------------------~~~~--------~~~~~~g~ 76 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVK-TVF--------------------QVPE--------IVNDADGQ 76 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE-EEE--------------------ECTT--------CCCCTTSS
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEe-EEe--------------------cCCc--------cccccCCC
Confidence 345679999999997777644456877764333211 000 0000 00000124
Q ss_pred CcEEEEEECCC---CCEEEEEEC-------------CCeEEEEECCCC--eE---EEeE-EEeC-CCCcEEEEEEcCCCC
Q psy14815 91 RTIRETAWSPC---GNFIASASF-------------DATTAVWDKRSG--QF---ECNA-TLEG-HENEVKSVTWSKNGQ 147 (479)
Q Consensus 91 ~~v~~v~~~~~---~~~l~t~~~-------------dg~i~iwd~~~~--~~---~~~~-~~~~-~~~~v~~l~~~~~~~ 147 (479)
.....|+|+|+ +..|..+.. ...|.-+++..+ +. +.+. .+.. .......|.|.|||.
T Consensus 77 ~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~ 156 (454)
T 1cru_A 77 NGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK 156 (454)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC
T ss_pred CceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe
Confidence 57789999995 455544432 134555554322 11 1122 2221 123578999999998
Q ss_pred EEEEEe
Q psy14815 148 FLATCS 153 (479)
Q Consensus 148 ~l~~~~ 153 (479)
+.++.+
T Consensus 157 Lyv~~G 162 (454)
T 1cru_A 157 IYYTIG 162 (454)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 766654
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=95.79 E-value=0.51 Score=47.80 Aligned_cols=204 Identities=10% Similarity=0.096 Sum_probs=107.2
Q ss_pred CCCCEEEEEECC----CeEEEEECCCCeEEEeE-E-----EeCCCCcEEEEEEcC-CCCEEEEEeCCC------cEEEEE
Q psy14815 100 PCGNFIASASFD----ATTAVWDKRSGQFECNA-T-----LEGHENEVKSVTWSK-NGQFLATCSRDK------SVWVWE 162 (479)
Q Consensus 100 ~~~~~l~t~~~d----g~i~iwd~~~~~~~~~~-~-----~~~~~~~v~~l~~~~-~~~~l~~~~~dg------~i~vwd 162 (479)
.++..++.|+.+ ..+.+||..++++..+. . +...... .+++..+ +++.++.|+.++ .+.+||
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~-hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMC-HTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBS-CEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccc-eEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 456677777753 46889999998876554 2 1111112 2333333 677777777543 578888
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCC--cEEEEecCCcccceEeeee---ecCCCccEEEEEEccC-
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD--TVKLFKEDKAEADWINFAT---LKSHTSTVWSLAFDRI- 236 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~- 236 (479)
..+. .+..+..+...... .+.+...++++++.|+.++ .+.+||..+.. |..+.. ..........+.+..+
T Consensus 475 ~~t~-~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~--W~~~~~~g~~p~~r~~~~a~v~~~~~ 550 (695)
T 2zwa_A 475 MKTR-EWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEI--FKDVTPKDEFFQNSLVSAGLEFDPVS 550 (695)
T ss_dssp TTTT-EEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTE--EEECCCSSGGGGSCCBSCEEEEETTT
T ss_pred CCCC-cEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCc--eEEccCCCCCCCcccceeEEEEeCCC
Confidence 8774 33333322221111 2233323788888888655 68999987643 444332 1111222233555554
Q ss_pred CCEEEEeeC--C-----CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC-----
Q psy14815 237 GSRLATCSD--D-----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD----- 304 (479)
Q Consensus 237 ~~~l~s~~~--d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d----- 304 (479)
++.++.|+. + +.+.+||+....- . ....|..+..........- ++....++++++.|+.+
T Consensus 551 ~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w-~------~~~~W~~~~~~p~~~R~~~-~~~~~~~~~iyv~GG~~~~~~~ 622 (695)
T 2zwa_A 551 KQGIILGGGFMDQTTVSDKAIIFKYDAENA-T------EPITVIKKLQHPLFQRYGS-QIKYITPRKLLIVGGTSPSGLF 622 (695)
T ss_dssp TEEEEECCBCTTSSCBCCEEEEEEECTTCS-S------CCEEEEEEEECGGGCCBSC-EEEEEETTEEEEECCBCSSCCC
T ss_pred CEEEEECCcCCCCCeeeCcEEEEEccCCcc-c------cceEEEEcCCCCCCCcccc-eEEEeCCCEEEEECCccCCCCC
Confidence 556667765 2 3588888754431 0 0012444443211101111 22222336777777643
Q ss_pred ---CeEEEcccCCCC
Q psy14815 305 ---DAIRIFKENPEA 316 (479)
Q Consensus 305 ---g~i~vw~~~~~~ 316 (479)
..+.+||..+.+
T Consensus 623 ~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 623 DRTNSIISLDPLSET 637 (695)
T ss_dssp CTTTSEEEEETTTTE
T ss_pred CCCCeEEEEECCCCe
Confidence 457788877654
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=95.74 E-value=0.22 Score=41.63 Aligned_cols=156 Identities=15% Similarity=0.211 Sum_probs=84.3
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEE----EeEEEe--CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeC
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE----CNATLE--GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 164 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~----~~~~~~--~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~ 164 (479)
..+..++|+|++.+.++ .+|.+.-.+..+.+.. ....+- +.. ...++.|.++|.+.++ .||.|.-++-.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence 46779999999886666 6687776666442100 011111 111 2478899999987776 56988777653
Q ss_pred CCCceeeee--ee--eccccceeEEEEecCCCEEEEEEcCCcEEEEecCC-cccceEeee-ee-cCCCccEEEEEEccCC
Q psy14815 165 EEDEYECAA--VI--NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK-AEADWINFA-TL-KSHTSTVWSLAFDRIG 237 (479)
Q Consensus 165 ~~~~~~~~~--~~--~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~-~~-~~~~~~v~~~~~~~~~ 237 (479)
+...-.-+. .. ..-=..+..|.|.|+|.+.++. |+.+.-..... ....+.... .+ ...-....-+.|.+++
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G 193 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVG 193 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTS
T ss_pred cCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCC
Confidence 221111100 00 1111457899999999877766 77643322211 111110001 11 1222344557799988
Q ss_pred CEEEEeeCCCeEEEEeccCC
Q psy14815 238 SRLATCSDDATVKIWKEYKP 257 (479)
Q Consensus 238 ~~l~s~~~dg~i~iwd~~~~ 257 (479)
...++. ++ ++|....+
T Consensus 194 ~l~~v~--~g--~~Y~~~~p 209 (236)
T 1tl2_A 194 TLFGVQ--GG--KFYEDYPP 209 (236)
T ss_dssp CEEEEE--TT--EEEEESCC
T ss_pred cEEEEe--CC--eEEecCCc
Confidence 766555 66 55655443
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.69 E-value=1.2 Score=40.59 Aligned_cols=130 Identities=9% Similarity=0.008 Sum_probs=65.7
Q ss_pred CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC------CCcEEEEEeC-CCCceeeeeeeeccccceeE
Q psy14815 112 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR------DKSVWVWEVG-EEDEYECAAVINAHIQDVKK 184 (479)
Q Consensus 112 g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~------dg~i~vwd~~-~~~~~~~~~~~~~~~~~v~~ 184 (479)
..+.+||..+.++..+..+......-.++... ++++++.|+. ...+..||+. ....+..+..+.........
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGG 246 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccc
Confidence 57999999999887765544221111233332 5666666654 3457778872 22233333332211111111
Q ss_pred EEEecCCCEEEEEEcC----------------------CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 185 VRFHPFDNILASASYD----------------------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 185 l~~~~~~~~l~~~~~d----------------------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
.+...++++++.|+.+ ..+.+||+.+. .|..+..+......-.++. .+++.++.
T Consensus 247 ~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~--~~~~i~v~ 322 (357)
T 2uvk_A 247 FAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG--KWDKSGELSQGRAYGVSLP--WNNSLLII 322 (357)
T ss_dssp EEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-----CEEEEECSSCCBSSEEEE--ETTEEEEE
T ss_pred eEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC--ceeeCCCCCCCcccceeEE--eCCEEEEE
Confidence 1222356777777742 24778888754 3455544443322222333 35677777
Q ss_pred eeCC
Q psy14815 243 CSDD 246 (479)
Q Consensus 243 ~~~d 246 (479)
|+.+
T Consensus 323 GG~~ 326 (357)
T 2uvk_A 323 GGET 326 (357)
T ss_dssp EEEC
T ss_pred eeeC
Confidence 8754
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=95.66 E-value=0.91 Score=48.96 Aligned_cols=214 Identities=7% Similarity=0.104 Sum_probs=124.0
Q ss_pred CCcEEEEecccccccccc--cC-----CCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCE
Q psy14815 32 DKNIRLWVMVIREPYEKL--HG-----LPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNF 104 (479)
Q Consensus 32 dg~v~iwd~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~ 104 (479)
..+|.|-|+..+....+- .. +| ...+++.-...++.+++++.... .+ ......+|.-=.|-.+. .
T Consensus 47 ~~~vvIidl~~~~~~~rrpi~AdsAIMnP-~~~iiALrag~~lQiFnl~~k~k---lk---s~~~~e~VvfWkWis~~-~ 118 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRPISADSAIMNP-ASKVIALKAGKTLQIFNIEMKSK---MK---AHTMTDDVTFWKWISLN-T 118 (1630)
T ss_pred CceEEEEECCCCCCcccccccchhhccCC-CcceEEEecCCeEEEeehHHhhh---hc---ccccCCCceEEEecCCC-e
Confidence 447899998876544221 11 23 33566666788999999973111 11 11224566666775443 4
Q ss_pred EEEEECCCeEEEEECCCCeEEEeEEEeCC----CCcEEEEEEcCCCCEEEEEe-------CCCcEEEEEeCCCCceeeee
Q psy14815 105 IASASFDATTAVWDKRSGQFECNATLEGH----ENEVKSVTWSKNGQFLATCS-------RDKSVWVWEVGEEDEYECAA 173 (479)
Q Consensus 105 l~t~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~v~~l~~~~~~~~l~~~~-------~dg~i~vwd~~~~~~~~~~~ 173 (479)
|+-.+ +..|.-|++.... .+...+..| ...|..-..+++.++++..+ ..|.+.+|..+.. ..+
T Consensus 119 l~lVT-~~aVyHW~~~~~s-~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~----~sQ 192 (1630)
T 1xi4_A 119 VALVT-DNAVYHWSMEGES-QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK----VSQ 192 (1630)
T ss_pred eEEEc-CCeEEEeccCCCC-ccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc----cch
Confidence 54444 3579999996532 344444444 34566666777888766443 3578999998764 344
Q ss_pred eeeccccceeEEEEe--cC-CCEEEEEEc---CCcEEEEecCCc---ccceE--eeeeec---CCCccEEEEEEccCCCE
Q psy14815 174 VINAHIQDVKKVRFH--PF-DNILASASY---DDTVKLFKEDKA---EADWI--NFATLK---SHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 174 ~~~~~~~~v~~l~~~--~~-~~~l~~~~~---dg~i~i~d~~~~---~~~~~--~~~~~~---~~~~~v~~~~~~~~~~~ 239 (479)
.+.+|......+... +. ...++.+.. .+.++|-++... .+.+. .+.... ....-..++..++....
T Consensus 193 ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~ 272 (1630)
T 1xi4_A 193 PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV 272 (1630)
T ss_pred hhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCE
Confidence 566676655444442 11 223333332 268999988653 11110 000000 11223346777877788
Q ss_pred EEEeeCCCeEEEEeccCCCC
Q psy14815 240 LATCSDDATVKIWKEYKPGN 259 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~~~ 259 (479)
++..+.-|.|.+||+.++..
T Consensus 273 iy~itk~G~~~~~d~~t~~~ 292 (1630)
T 1xi4_A 273 VFLITKYGYIHLYDLETGTC 292 (1630)
T ss_pred EEEEecCceEEEEecccchh
Confidence 88899999999999976643
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=95.66 E-value=0.78 Score=46.42 Aligned_cols=153 Identities=12% Similarity=0.109 Sum_probs=85.3
Q ss_pred CCCEEEEEECC------CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC--cEEEEEeCCCCceeee
Q psy14815 101 CGNFIASASFD------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK--SVWVWEVGEEDEYECA 172 (479)
Q Consensus 101 ~~~~l~t~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~ 172 (479)
++..++.|+.+ +.+.+||..++++.....+...... .+++...++..++.|+.++ .+.+||..+. .+..+
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~-~W~~~ 528 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEE-IFKDV 528 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTT-EEEEC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCC-ceEEc
Confidence 66677777653 3688999999887665444322222 2333324788888887655 6899998875 23333
Q ss_pred ee---eeccccceeEEEEecC-CCEEEEEEc--C-----CcEEEEecCCccc----ceEeeeeec-CCCccEEEEEEccC
Q psy14815 173 AV---INAHIQDVKKVRFHPF-DNILASASY--D-----DTVKLFKEDKAEA----DWINFATLK-SHTSTVWSLAFDRI 236 (479)
Q Consensus 173 ~~---~~~~~~~v~~l~~~~~-~~~l~~~~~--d-----g~i~i~d~~~~~~----~~~~~~~~~-~~~~~v~~~~~~~~ 236 (479)
.. .........++.+..+ +++++.|+. + ..+.+||+.+..- .|..+.... ....... ++...+
T Consensus 529 ~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~-~~~~~~ 607 (695)
T 2zwa_A 529 TPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQ-IKYITP 607 (695)
T ss_dssp CCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCE-EEEEET
T ss_pred cCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccce-EEEeCC
Confidence 22 1111222234566655 677788876 2 3588999886551 133333311 1111112 222333
Q ss_pred CCEEEEeeC--------CCeEEEEeccC
Q psy14815 237 GSRLATCSD--------DATVKIWKEYK 256 (479)
Q Consensus 237 ~~~l~s~~~--------dg~i~iwd~~~ 256 (479)
++.++.|+. ...+.+||+..
T Consensus 608 ~~iyv~GG~~~~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 608 RKLLIVGGTSPSGLFDRTNSIISLDPLS 635 (695)
T ss_dssp TEEEEECCBCSSCCCCTTTSEEEEETTT
T ss_pred CEEEEECCccCCCCCCCCCeEEEEECCC
Confidence 666677764 24588888743
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=95.46 E-value=3.5 Score=44.30 Aligned_cols=213 Identities=11% Similarity=0.105 Sum_probs=111.5
Q ss_pred cCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCC------CCEEEEEEC-CCeEEEEECCCCeEEEeEEEeCCCC
Q psy14815 63 EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC------GNFIASASF-DATTAVWDKRSGQFECNATLEGHEN 135 (479)
Q Consensus 63 ~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~------~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~~~~~ 135 (479)
.++.+.++.++. ...... ....-...|.|+++.|. +++++.|.. |++++|+++.+.+......+.. ..
T Consensus 530 ~g~~l~~fel~~--~~L~~~--~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~-~~ 604 (1158)
T 3ei3_A 530 VGRALYYLQIHP--QELRQI--SHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG-EI 604 (1158)
T ss_dssp ETTEEEEEEEET--TEEEEE--EEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCS-SC
T ss_pred ECCEEEEEEeeC--Cceeee--cccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCC-CC
Confidence 356677766653 111111 11233568999999863 478999996 9999999998765443334432 12
Q ss_pred cEEEEEEcC--CCCEEEEEeCCCcEEEEEeCCCC-ceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcc
Q psy14815 136 EVKSVTWSK--NGQFLATCSRDKSVWVWEVGEED-EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 212 (479)
Q Consensus 136 ~v~~l~~~~--~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~ 212 (479)
...++.+.. ...+|..|-.||.+..+.+.... .....+...--..++.-..+...+..-+.+..+.-..+|.-+. .
T Consensus 605 ~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~~-~ 683 (1158)
T 3ei3_A 605 IPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNH-K 683 (1158)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESSS-S
T ss_pred CCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcCC-c
Confidence 344444432 34578899999998777765321 1111111111133444444444443333333444445554332 1
Q ss_pred cceEeeeeecCCCccE-EEEEEccC--CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEE
Q psy14815 213 ADWINFATLKSHTSTV-WSLAFDRI--GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI 289 (479)
Q Consensus 213 ~~~~~~~~~~~~~~~v-~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 289 (479)
. ....+.. ..+ ....|+.. .+-++..+ ++.++|..+.... . -.++++.- +..+..+
T Consensus 684 l---~~s~l~~--~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~------------~-~~~~~ipL--~~Tprri 742 (1158)
T 3ei3_A 684 L---VFSNVNL--KEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQ------------K-LHIRTVPL--YESPRKI 742 (1158)
T ss_dssp E---EEEEBSS--SCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSS------------S-EEEEEEEC--SSEEEEE
T ss_pred e---EEeccCh--HHhceEeccCcccCCCcEEEEc-CCceEEEEecccC------------C-eeEEEEeC--CCCceEE
Confidence 1 1222211 122 23345432 23344443 5569999874331 1 12333333 4578888
Q ss_pred EecCCCCeEEEEe
Q psy14815 290 SWCHLTDLIATAC 302 (479)
Q Consensus 290 ~~~~~~~~l~~~~ 302 (479)
+++|..+.++.+.
T Consensus 743 ~y~~~~~~~~v~~ 755 (1158)
T 3ei3_A 743 CYQEVSQCFGVLS 755 (1158)
T ss_dssp EEEGGGTEEEEEE
T ss_pred EEcCCCCEEEEEE
Confidence 8888877665554
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=95.31 E-value=1.5 Score=39.23 Aligned_cols=180 Identities=12% Similarity=0.089 Sum_probs=89.8
Q ss_pred eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC----CC-------cEEEEEeCCCCceeeeeeeeccccc
Q psy14815 113 TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR----DK-------SVWVWEVGEEDEYECAAVINAHIQD 181 (479)
Q Consensus 113 ~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~----dg-------~i~vwd~~~~~~~~~~~~~~~~~~~ 181 (479)
.+..||..++++.. ..+..............++..++.|+. ++ .+..||..+. .+..+..+......
T Consensus 25 ~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~ 102 (318)
T 2woz_A 25 AAVAYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSS-EWVGLPPLPSARCL 102 (318)
T ss_dssp EEEEEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTT-EEEECSCBSSCBCS
T ss_pred ceEEECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCC-cEEECCCCCccccc
Confidence 48999999998765 333322222223333457777888873 12 1677887764 23333222221111
Q ss_pred eeEEEEecCCCEEEEEEcC-------CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeC------CCe
Q psy14815 182 VKKVRFHPFDNILASASYD-------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD------DAT 248 (479)
Q Consensus 182 v~~l~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~------dg~ 248 (479)
...+.+ ++++++.|+.+ ..+.+||..+.+ |..+..+......-..+. .+++.++.|+. -..
T Consensus 103 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~ 176 (318)
T 2woz_A 103 FGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAK--WSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNR 176 (318)
T ss_dssp CEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTE--EEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCC
T ss_pred cceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCC--EeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccce
Confidence 122222 57777888764 247788877543 444333322111112222 34666666653 235
Q ss_pred EEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC-----CeEEEcccCCCC
Q psy14815 249 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD-----DAIRIFKENPEA 316 (479)
Q Consensus 249 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d-----g~i~vw~~~~~~ 316 (479)
+.+||... ..|..+..+... ...-..+.+ ++++++.|+.+ ..+.+||..+.+
T Consensus 177 ~~~yd~~~-------------~~W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 177 VFIYNPKK-------------GDWKDLAPMKTP-RSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EEEEETTT-------------TEEEEECCCSSC-CBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred EEEEcCCC-------------CEEEECCCCCCC-cccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 78888643 234433322221 111112222 56677777643 356778877654
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=95.21 E-value=2.4 Score=40.88 Aligned_cols=115 Identities=12% Similarity=0.003 Sum_probs=69.7
Q ss_pred ceeEEEEecCCCEEEEEE-cCCcEEEEecCCccc---------ceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEE
Q psy14815 181 DVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEA---------DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 250 (479)
Q Consensus 181 ~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 250 (479)
....+..+|+|+++++++ .+.++.++|+++... .-....+.. -.......+|+++|.-..|.--|..|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEE
Confidence 345788999999888776 578899999985321 001122222 334567889999996666677899999
Q ss_pred EEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEe------cCCCCeEEEEeC
Q psy14815 251 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW------CHLTDLIATACG 303 (479)
Q Consensus 251 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~------~~~~~~l~~~~~ 303 (479)
-|++........ .+.....+..+..| -. +-.+.- .++|++|++.+.
T Consensus 403 kWni~~a~~~~~-----g~~~~~v~~k~dv~-Yq-pGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 403 KWNMEEAVRAYK-----GEKVNYIKQKLDVH-YQ-PGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp EEEHHHHHHHHT-----TCCCCCEEEEEECS-SC-EEEEEETTTTSTTCCSCEEEEEES
T ss_pred EEeccHHHHHhc-----CccCCeeeeccccc-cC-CcccccCCCccCCCCccEEEEecc
Confidence 999864310000 01122445556554 22 222222 468889888754
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=94.19 E-value=5 Score=39.94 Aligned_cols=200 Identities=11% Similarity=0.040 Sum_probs=118.7
Q ss_pred CcEEEEEECCCCCEEEEEE-CCCeEEEEECCCCeEEEeEEEeC------CCCcEEEEEEcCCCCEEE-EEeCCCcEEEEE
Q psy14815 91 RTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQFECNATLEG------HENEVKSVTWSKNGQFLA-TCSRDKSVWVWE 162 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~~~------~~~~v~~l~~~~~~~~l~-~~~~dg~i~vwd 162 (479)
..+.+++|.+.+..|+.+. ..+.|..+++...... ..+.. ....+..+++...++.|+ +-+..+.|.+.+
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~--~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~ 417 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGF--TVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTR 417 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--EEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCce--EEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEE
Confidence 5678899988666665554 4678888887654311 11221 234678999998766555 445677899999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEec-CCCEEEEEEcCC--cEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDD--TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
+... .....+.......++|++.| .|.++++-.... .|...+++.... ..+ ....-...+.+++++.++.
T Consensus 418 ~~G~---~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~--~~l--~~~~l~~P~gla~D~~~~~ 490 (628)
T 4a0p_A 418 LDGR---SVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTER--EVL--FFSGLSKPIALALDSRLGK 490 (628)
T ss_dssp TTSC---EEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSC--EEE--ECSSCSCEEEEEEETTTTE
T ss_pred CCCC---eEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCc--EEE--EeccCCCccEEEEeCCCCE
Confidence 8754 11122223345678999999 555555543333 566666664332 111 1222345789999998877
Q ss_pred EEEeeC-CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 240 LATCSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 240 l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
|+.+.. .+.|...++..... ..+..........++... +.++.+-...+.|...|..+++
T Consensus 491 LYw~D~~~~~I~~~~~dG~~r----------------~~~~~~~~~~P~glav~~-~~ly~tD~~~~~i~~~~k~~G~ 551 (628)
T 4a0p_A 491 LFWADSDLRRIESSDLSGANR----------------IVLEDSNILQPVGLTVFE-NWLYWIDKQQQMIEKIDMTGRE 551 (628)
T ss_dssp EEEEETTTTEEEEEETTSCSC----------------EEEECSSCSCEEEEEEET-TEEEEEETTTTEEEEEETTSSS
T ss_pred EEEEeCCCCEEEEEeCCCCce----------------EEEEcCCCCCcEEEEEEC-CEEEEEECCCCeEEEEECcCCC
Confidence 776654 57788888733211 122211133456777654 4455555556777777776655
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=94.09 E-value=3 Score=37.07 Aligned_cols=178 Identities=10% Similarity=0.079 Sum_probs=94.0
Q ss_pred EECCCCCEEEEEECC--------------CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe--CCCc--E
Q psy14815 97 AWSPCGNFIASASFD--------------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS--RDKS--V 158 (479)
Q Consensus 97 ~~~~~~~~l~t~~~d--------------g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~--~dg~--i 158 (479)
-+++++.+|+.+... ..|+..++..++... +.. .. +..|+++++.|+-.. .++. |
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~---l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV---LDP--DP--CIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE---EEC--SC--EEEEEEETTEEEEEEESSSSCEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE---eec--CC--ccEEEEeCCEEEEEeecCCCCceE
Confidence 346778887777543 367778887765322 221 11 236777888888776 3444 4
Q ss_pred EEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc-CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC
Q psy14815 159 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG 237 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 237 (479)
...++.... ...+..+.. ..++++++.|.-.+. ...|...++..... +.+ .. +... ..+.|++
T Consensus 132 y~~~~dGs~----~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~--~~l--~~---~~~~-~~~~P~g 195 (302)
T 3s25_A 132 YRIRIDGEE----KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSE--ALF--YD---CNCY-KPVVLDD 195 (302)
T ss_dssp EEEETTSCC----CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEE--EEE--EC---SCEE-EEEEEET
T ss_pred EEEECCCCC----eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCE--EEE--eC---CCcc-ceeeecC
Confidence 444554432 222333222 456777877776654 56788888775542 112 22 1222 2356888
Q ss_pred CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeC--CCeEEEcccCCC
Q psy14815 238 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG--DDAIRIFKENPE 315 (479)
Q Consensus 238 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~--dg~i~vw~~~~~ 315 (479)
++|+-....+.-+|+.+...... ...+.. ..+ ..|+|++++|.-++. .+.|..-+++..
T Consensus 196 ~~iy~t~~~~~~~I~~~~ldG~~--------------~~~Lt~---~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 196 TNVYYMDVNRDNAIVHVNINNPN--------------PVVLTE---ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp TEEEEEEGGGTTEEEEECSSSCC--------------CEECSC---SCE--EEEEEETTEEEEEECSSSCEEEEEETTSC
T ss_pred CEEEEEEcCCCcEEEEEECCCCC--------------eEEEeC---CCc--ceEEECCCEEEEEECCCCcEEEEEECCCC
Confidence 88876654432344443222211 111211 122 236778887776532 355666666554
Q ss_pred C
Q psy14815 316 A 316 (479)
Q Consensus 316 ~ 316 (479)
.
T Consensus 257 ~ 257 (302)
T 3s25_A 257 G 257 (302)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=93.66 E-value=1.2 Score=40.34 Aligned_cols=187 Identities=7% Similarity=-0.019 Sum_probs=93.8
Q ss_pred CeEEEeeCCCcEEEEecccccccccccCC---C----------ccceEEEe--ecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 24 TMISSCGEDKNIRLWVMVIREPYEKLHGL---P----------VETSLRQL--VEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 24 ~~l~t~~~dg~v~iwd~~~~~~~~~~~~~---~----------~~~~~~~~--~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
.+++.++.||.|.-.|.++|+...++... + .+..++.. ..+|.+..++.......+.... ...-
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~-~~lv 89 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSI-RQLV 89 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEH-HHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecc-ccce
Confidence 36777888888888888887776655432 1 01133333 4789998888764311111110 0001
Q ss_pred cCCcEEE---EEE-----CCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCC--Cc-----EEEEEEc-----CCCCE
Q psy14815 89 HQRTIRE---TAW-----SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHE--NE-----VKSVTWS-----KNGQF 148 (479)
Q Consensus 89 ~~~~v~~---v~~-----~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~-----v~~l~~~-----~~~~~ 148 (479)
...++.. ..+ ...+..+++|+.+|.+...|+.+|+ .+..+.... .. ..|.... ..+..
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~--~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~ 167 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGE--IISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENM 167 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCC--EEEEESTTCBCC--------------------CCE
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCc--EEEEEecCCCcccccccccccccccccccccCCCe
Confidence 1222221 000 0135688999999999999999997 445544221 10 0111110 12356
Q ss_pred EEEEeCCCcEEEEEeCCCCceeee-eeeecccc--ce-eEEEEecCCCEEEEEEcCCcEEEEecCCcccce
Q psy14815 149 LATCSRDKSVWVWEVGEEDEYECA-AVINAHIQ--DV-KKVRFHPFDNILASASYDDTVKLFKEDKAEADW 215 (479)
Q Consensus 149 l~~~~~dg~i~vwd~~~~~~~~~~-~~~~~~~~--~v-~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 215 (479)
++.+..+..+.+.+ ++++.+... ........ ++ .+-..+.++.+ +.++.||.|..+|..++...|
T Consensus 168 v~ig~~~y~v~~~~-~sG~~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 168 IVIGKTIFELGIHS-YDGASYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEEEECEECC-TTSCCCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred EEEecceEEEEEEC-CCCCeEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 77777666666666 333211110 00000000 00 00001123555 557889999999988777544
|
| >2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=93.30 E-value=0.54 Score=42.55 Aligned_cols=111 Identities=9% Similarity=0.014 Sum_probs=64.1
Q ss_pred CEEEEEECCCeEEEEECCCCeEEEeEEEeCC-CCcEEEEEEc--CCCCEEEEE--eCCCcEEEEEeCCCCceeeeeeeec
Q psy14815 103 NFIASASFDATTAVWDKRSGQFECNATLEGH-ENEVKSVTWS--KNGQFLATC--SRDKSVWVWEVGEEDEYECAAVINA 177 (479)
Q Consensus 103 ~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~v~~l~~~--~~~~~l~~~--~~dg~i~vwd~~~~~~~~~~~~~~~ 177 (479)
..++.++.||.|.-.|..+|+ ....++.. ..++....-. +.+..++.+ +.||.+..++..++...... ....
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~--~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~-~~~~ 87 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGH--IIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPL-SIRQ 87 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTE--EEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEE-EHHH
T ss_pred CEEEEEeCCCeEEEEECCCCc--EEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeee-cccc
Confidence 478899999999999999997 44555432 1222221100 112234433 58999999998776321111 1100
Q ss_pred --cccceeE---EEE-e----cCCCEEEEEEcCCcEEEEecCCcccceE
Q psy14815 178 --HIQDVKK---VRF-H----PFDNILASASYDDTVKLFKEDKAEADWI 216 (479)
Q Consensus 178 --~~~~v~~---l~~-~----~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 216 (479)
...++.. ... . ..+..+++|+.+|.+...|.++++..|.
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~ 136 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISA 136 (339)
T ss_dssp HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEE
T ss_pred ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEE
Confidence 1111211 000 0 1356789999999999999999886443
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=92.38 E-value=5.6 Score=35.27 Aligned_cols=173 Identities=6% Similarity=-0.002 Sum_probs=90.6
Q ss_pred CCCCEEEEEEC--CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC--------------CcEEEEEe
Q psy14815 100 PCGNFIASASF--DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD--------------KSVWVWEV 163 (479)
Q Consensus 100 ~~~~~l~t~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d--------------g~i~vwd~ 163 (479)
+++..++.... ++.|...+........+.. . .+-.+++++.+|+-+... ..|+..++
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~-----~--~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSN-----D--TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCSCEEEEE-----E--EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCCCEEccC-----C--ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 45666666542 4666666765544222221 1 133457788887777543 35666677
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEEE--cC--CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS--YD--DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~--~d--g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
...+. .. +.. . .+..|+++++.|+-.. .+ ..|...++..... ..+..+.. ..++++++.
T Consensus 96 dg~~~-~~---l~~--~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~-----~~lt~~~~----~~~~~~g~~ 158 (302)
T 3s25_A 96 NGHGS-TV---LDP--D--PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEK-----KKIKNHYL----FTCNTSDRY 158 (302)
T ss_dssp TSCCC-EE---EEC--S--CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCC-----EEEESSCC----CCSEEETTE
T ss_pred CCCcc-eE---eec--C--CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCe-----EEEeCCCc----eEeeEECCE
Confidence 66532 11 211 1 1236778888888776 23 3455555554332 22222322 346778888
Q ss_pred EEEeeC-CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC--CeEEEcccCCCC
Q psy14815 240 LATCSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD--DAIRIFKENPEA 316 (479)
Q Consensus 240 l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d--g~i~vw~~~~~~ 316 (479)
|+-.+. ...|..-++.... ....+.+ ... ..+.|++.+|+-...+ ..|..-+++...
T Consensus 159 iy~t~~g~~~Iy~~~l~g~~---------------~~~l~~~----~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~ 218 (302)
T 3s25_A 159 FYYNNPKNGQLYRYDTASQS---------------EALFYDC----NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN 218 (302)
T ss_dssp EEEECTTTCCEEEEETTTTE---------------EEEEECS----CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC
T ss_pred EEEEeCCCceEEEEECCCCC---------------EEEEeCC----Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC
Confidence 875554 4566666653221 1111222 122 2356888888776544 355555555544
|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
Probab=89.65 E-value=7.8 Score=36.79 Aligned_cols=111 Identities=15% Similarity=0.069 Sum_probs=62.1
Q ss_pred cEEEEEEcCCCC-EEEEEeCCCcEEEEEeCCCCceeeeeee----e-----ccccceeEEEEecC----CCEEEEEEcC-
Q psy14815 136 EVKSVTWSKNGQ-FLATCSRDKSVWVWEVGEEDEYECAAVI----N-----AHIQDVKKVRFHPF----DNILASASYD- 200 (479)
Q Consensus 136 ~v~~l~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~----~-----~~~~~v~~l~~~~~----~~~l~~~~~d- 200 (479)
....|+|.|++. .|+++...|.|++++.........+..+ . ........|+|+|+ +.+.++-+.+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 467999999996 5667778999999975432111111111 1 11346788999996 4444443321
Q ss_pred -----------CcEEEEecCCcc------cceEeeeeec--CCCccEEEEEEccCCCEEEEeeCC
Q psy14815 201 -----------DTVKLFKEDKAE------ADWINFATLK--SHTSTVWSLAFDRIGSRLATCSDD 246 (479)
Q Consensus 201 -----------g~i~i~d~~~~~------~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~d 246 (479)
..|.-|.+.... ...+.+..+. ........|+|.|||.+.++.+..
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 134446554210 0112222221 222346789999999877765543
|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
Probab=86.30 E-value=23 Score=33.56 Aligned_cols=29 Identities=3% Similarity=0.038 Sum_probs=22.4
Q ss_pred cceEEEEECCCCC-eEEEeeCCCcEEEEec
Q psy14815 12 GRVWNVSWNPQGT-MISSCGEDKNIRLWVM 40 (479)
Q Consensus 12 ~~V~~l~~s~~~~-~l~t~~~dg~v~iwd~ 40 (479)
..-+.|+|.|+|. .|+.+...|.|++++.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~ 43 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTP 43 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeC
Confidence 4567899999996 4555667899999964
|
| >1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A* | Back alignment and structure |
|---|
Probab=83.52 E-value=36 Score=34.84 Aligned_cols=155 Identities=10% Similarity=0.122 Sum_probs=83.7
Q ss_pred CCcEEEEEECCC-CCEEEEEECCCeEEEEECCCCeEEEeEEEeC----CCCcEEEEEEcCC-CCEEEEEeCCCc----EE
Q psy14815 90 QRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEG----HENEVKSVTWSKN-GQFLATCSRDKS----VW 159 (479)
Q Consensus 90 ~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~v~~l~~~~~-~~~l~~~~~dg~----i~ 159 (479)
...|.+|+++|. ...++.++..+.|...+=....+..+..... ....+.++++.|. ...++.+..+.. -.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence 468999999995 4566777777777666644444443221010 1246999999983 345555543211 33
Q ss_pred EEEe-CCCCceeeeeeeec------cccceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEeeeeec---CCCccE
Q psy14815 160 VWEV-GEEDEYECAAVINA------HIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLK---SHTSTV 228 (479)
Q Consensus 160 vwd~-~~~~~~~~~~~~~~------~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~~~~~v 228 (479)
||.- ..++.++.+..-.. ....+..++++|. .+.+..+...+. +|--..+...|..+.... .....+
T Consensus 94 v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~DgG~TW~~~~~~~~~~~~~~~~ 171 (789)
T 1sqj_A 94 FYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSDRAKTWTNVTSIPDAFTNGIGY 171 (789)
T ss_dssp EEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESSTTSSCEEETTSCCCCSTTTCE
T ss_pred EEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECCCCcccCCCccCccccCCCCCe
Confidence 4433 44444444322100 0113567888884 355666654443 343333334566554322 112457
Q ss_pred EEEEEccC-CCEEEEeeCC
Q psy14815 229 WSLAFDRI-GSRLATCSDD 246 (479)
Q Consensus 229 ~~~~~~~~-~~~l~s~~~d 246 (479)
..+.++|. +..++.+..+
T Consensus 172 ~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 172 TSVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEEEECTTSTTCEEEEESS
T ss_pred EEEEECCCCCCEEEEEEcC
Confidence 88999884 4466666554
|
| >3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=83.51 E-value=27 Score=32.03 Aligned_cols=155 Identities=12% Similarity=0.034 Sum_probs=77.2
Q ss_pred CCcEEEEEECC-CCCEEEEEECCC----eEEEEECCCCeEEEeEE---EeC--------CCCcEEEEEEcC-C-CCEEEE
Q psy14815 90 QRTIRETAWSP-CGNFIASASFDA----TTAVWDKRSGQFECNAT---LEG--------HENEVKSVTWSK-N-GQFLAT 151 (479)
Q Consensus 90 ~~~v~~v~~~~-~~~~l~t~~~dg----~i~iwd~~~~~~~~~~~---~~~--------~~~~v~~l~~~~-~-~~~l~~ 151 (479)
...|.+|++.| +...+..++..| .|...+-....+..... +.. ....|.++++.| + ...+++
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 45799999998 333444454444 44443322222222211 111 112577899987 2 556676
Q ss_pred EeCCCcEEEEEeCCCCceeeeeeee----------------ccccceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccc
Q psy14815 152 CSRDKSVWVWEVGEEDEYECAAVIN----------------AHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEAD 214 (479)
Q Consensus 152 ~~~dg~i~vwd~~~~~~~~~~~~~~----------------~~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~ 214 (479)
+...+.|...+ ..++.++.+.... .....+.+|.++|. ...+..+..++.|... ..+...
T Consensus 134 g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s--~DgG~t 210 (394)
T 3b7f_A 134 GTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFES--TDAGTD 210 (394)
T ss_dssp EEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEE--SSTTSS
T ss_pred EecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEE--CCCCCC
Confidence 66666544332 2233333332111 11235788999883 4455666555544433 222234
Q ss_pred eEeeee-ecC-C--------CccEEEEEEccC-CCEEEEeeCCC
Q psy14815 215 WINFAT-LKS-H--------TSTVWSLAFDRI-GSRLATCSDDA 247 (479)
Q Consensus 215 ~~~~~~-~~~-~--------~~~v~~~~~~~~-~~~l~s~~~dg 247 (479)
|..+.. ... + ...+.++.++|. ...|+.+...+
T Consensus 211 W~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 211 WKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp CEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred ceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 443321 110 0 134889999986 35676666544
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=82.45 E-value=11 Score=36.50 Aligned_cols=107 Identities=13% Similarity=0.089 Sum_probs=66.1
Q ss_pred cEEEEEEcCCCCEEEEEeC-CCcEEEEEeCCCCc-----e----ee-eeeeeccccceeEEEEecCCCEEEEEEcCCcEE
Q psy14815 136 EVKSVTWSKNGQFLATCSR-DKSVWVWEVGEEDE-----Y----EC-AAVINAHIQDVKKVRFHPFDNILASASYDDTVK 204 (479)
Q Consensus 136 ~v~~l~~~~~~~~l~~~~~-dg~i~vwd~~~~~~-----~----~~-~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~ 204 (479)
....+..+|||+++++++. +.++.++|++.... + .. ..... -.......+|.++|+-..+-.-|..|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEE
Confidence 3457889999999888765 77899999974210 0 00 11111 233456789999996666666899999
Q ss_pred EEecCCc------ccceEeeeeecCCCccEEEEEE------ccCCCEEEEee
Q psy14815 205 LFKEDKA------EADWINFATLKSHTSTVWSLAF------DRIGSRLATCS 244 (479)
Q Consensus 205 i~d~~~~------~~~~~~~~~~~~~~~~v~~~~~------~~~~~~l~s~~ 244 (479)
-|++... +.....+..+.-|.. +-.+.- .++|++|++..
T Consensus 403 kWni~~a~~~~~g~~~~~v~~k~dv~Yq-pGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 403 KWNMEEAVRAYKGEKVNYIKQKLDVHYQ-PGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEHHHHHHHHTTCCCCCEEEEEECSSC-EEEEEETTTTSTTCCSCEEEEEE
T ss_pred EEeccHHHHHhcCccCCeeeeccccccC-CcccccCCCccCCCCccEEEEec
Confidence 9998753 111123334443433 222322 46788888765
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 479 | ||||
| d2gx8a1 | 370 | c.135.1.1 (A:4-373) Nif3-related protein BC4286 {B | 9e-36 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 8e-30 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 4e-18 | |
| d2fywa1 | 265 | c.135.1.1 (A:1-265) Hypothetical protein SP1609 {S | 1e-29 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 1e-24 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 5e-24 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 4e-12 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 2e-11 | |
| d1nmpa_ | 247 | c.135.1.1 (A:) Hypothetical protein YbgI {Escheric | 9e-24 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 1e-23 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 3e-20 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 1e-15 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 1e-05 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 0.001 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 2e-19 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 1e-12 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 2e-12 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 1e-15 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 1e-13 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 5e-12 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 1e-10 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 6e-05 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 1e-14 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 4e-11 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 9e-10 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 1e-08 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 3e-04 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 1e-14 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 4e-10 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 5e-10 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 3e-14 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 3e-11 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 4e-10 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 2e-04 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 0.002 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 1e-13 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 6e-12 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 3e-11 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 1e-10 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 9e-06 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 3e-12 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 2e-10 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 3e-06 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 0.002 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 4e-10 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 5e-09 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 1e-06 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 1e-05 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 1e-04 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 4e-09 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 4e-07 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 3e-06 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 8e-04 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 5e-09 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 2e-07 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 7e-07 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 8e-08 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 9e-08 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 1e-05 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 8e-08 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 6e-06 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 5e-04 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 6e-07 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 1e-06 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 5e-06 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 2e-04 | |
| d1qksa2 | 432 | b.70.2.1 (A:136-567) C-terminal (heme d1) domain o | 3e-05 | |
| d1qksa2 | 432 | b.70.2.1 (A:136-567) C-terminal (heme d1) domain o | 3e-04 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 6e-05 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 1e-04 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 1e-04 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 0.002 | |
| d1hzua2 | 426 | b.70.2.1 (A:118-543) C-terminal (heme d1) domain o | 0.001 | |
| d1mdah_ | 368 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 0.003 |
| >d2gx8a1 c.135.1.1 (A:4-373) Nif3-related protein BC4286 {Bacillus cereus [TaxId: 1396]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NIF3 (NGG1p interacting factor 3)-like superfamily: NIF3 (NGG1p interacting factor 3)-like family: NIF3 (NGG1p interacting factor 3)-like domain: Nif3-related protein BC4286 species: Bacillus cereus [TaxId: 1396]
Score = 134 bits (337), Expect = 9e-36
Identities = 38/109 (34%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
Query: 356 TLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTD 415
H+++ E+M P LA D +GL I K ++++++ +D+T+EV+ EA++ G +
Sbjct: 3 NGHEIISLFESMYPKHLAMEGDKIGLQIG--ALNKPVRHVLIALDVTEEVVDEAIQLGAN 60
Query: 416 LIIAYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQEG 464
+IIA+HP IF PLK + DK +++ C+ ++IA+Y+ HT D + G
Sbjct: 61 VIIAHHPLIFNPLKAIHTDKAYGKIIEKCIKNDIAIYAAHTNVDVAKGG 109
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 116 bits (290), Expect = 8e-30
Identities = 67/332 (20%), Positives = 124/332 (37%), Gaps = 50/332 (15%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG-----LPVETSLR 59
L GH+ V V ++P +++ S ED I++W + L G +
Sbjct: 11 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 70
Query: 60 QLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDK 119
+ + + + GH + + P G+ I SAS D T +W+
Sbjct: 71 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 130
Query: 120 RSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI 179
++G T GH V+ V +++G +A+CS D++V VW V EC A + H
Sbjct: 131 QTGYCVK--TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV---ATKECKAELREHR 185
Query: 180 QDVKKVRFH--------------------PFDNILASASYDDTVKLFKEDKAEADWINFA 219
V+ + + L S S D T+K++
Sbjct: 186 HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC----LM 241
Query: 220 TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS 279
TL H + V + F G + +C+DD T+++W + +C+ TL+
Sbjct: 242 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW---------------DYKNKRCMKTLN 286
Query: 280 GHHGRTIYDISWCHLTDLIATACGDDAIRIFK 311
H + + + + T D +++++
Sbjct: 287 AHEHF-VTSLDFHKTAPYVVTGSVDQTVKVWE 317
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 82.9 bits (203), Expect = 4e-18
Identities = 52/262 (19%), Positives = 103/262 (39%), Gaps = 23/262 (8%)
Query: 88 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 147
GH+ + + P + + SAS DAT VWD +G TL+GH + V+ +++ +G+
Sbjct: 15 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD--FERTLKGHTDSVQDISFDHSGK 72
Query: 148 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 207
+ + ++ + +EC ++ H +V V P + + SAS D T+K+++
Sbjct: 73 L---LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWE 129
Query: 208 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD 267
T H V + ++ G+ +A+CS+D TV++W A +
Sbjct: 130 VQ----TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHR 185
Query: 268 ND----SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVS 323
+ S S + + D I+++ D+ +
Sbjct: 186 HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW---------DVST 236
Query: 324 FDLVHTEHRAHNQDVNCVAWNP 345
+ T H+ V V ++
Sbjct: 237 GMCLMT-LVGHDNWVRGVLFHS 257
|
| >d2fywa1 c.135.1.1 (A:1-265) Hypothetical protein SP1609 {Streptococcus pneumoniae [TaxId: 1313]} Length = 265 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NIF3 (NGG1p interacting factor 3)-like superfamily: NIF3 (NGG1p interacting factor 3)-like family: NIF3 (NGG1p interacting factor 3)-like domain: Hypothetical protein SP1609 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 114 bits (287), Expect = 1e-29
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 355 LTLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGT 414
+ +V++ EA P + D+ GL I K I+ +M+ +D+ +E + EA+E G
Sbjct: 1 MLASEVIQAYEAFCPQEFSMEGDSRGLQIG--TLDKGIQRVMVALDIREETVAEAIEKGV 58
Query: 415 DLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQEG 464
DLII H PIF P+K + + + ++ + H+IAVY HT D ++ G
Sbjct: 59 DLIIVKHAPIFRPIKDLLASRPQNQIYIDLIKHDIAVYVSHTNIDIVENG 108
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 102 bits (254), Expect = 1e-24
Identities = 52/256 (20%), Positives = 92/256 (35%), Gaps = 15/256 (5%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWV--------MVIREPYEKLHGLPVET 56
+ V ++ P G ++ G D ++ V RE L
Sbjct: 91 HAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCR 150
Query: 57 SLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 116
L + + + + GH + + +P S + DA+ +
Sbjct: 151 FLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKL 210
Query: 117 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVIN 176
WD R G C T GHE+++ ++ + NG AT S D + ++++ + E + N
Sbjct: 211 WDVREGM--CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDN 268
Query: 177 AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 236
I + V F +L + D ++ KA+ L H + V L
Sbjct: 269 -IICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD----RAGVLAGHDNRVSCLGVTDD 323
Query: 237 GSRLATCSDDATVKIW 252
G +AT S D+ +KIW
Sbjct: 324 GMAVATGSWDSFLKIW 339
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 100 bits (249), Expect = 5e-24
Identities = 50/312 (16%), Positives = 99/312 (31%), Gaps = 27/312 (8%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVE-TSLRQLVE 63
+TL+GH +++ + W ++ S +D + +W + +
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 64 DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD----- 118
+ G ++ + + K + T+ D
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCAL 168
Query: 119 KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAH 178
+ T GH +V S++ + + + + + D S +W+V E C H
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDV---REGMCRQTFTGH 225
Query: 179 IQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS 238
D+ + F P N A+ S D T +LF + + + S++F + G
Sbjct: 226 ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH--DNIICGITSVSFSKSGR 283
Query: 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI 298
L DD +W K L+GH R + + +
Sbjct: 284 LLLAGYDDFNCNVWDALK---------------ADRAGVLAGHDNR-VSCLGVTDDGMAV 327
Query: 299 ATACGDDAIRIF 310
AT D ++I+
Sbjct: 328 ATGSWDSFLKIW 339
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 64.8 bits (156), Expect = 4e-12
Identities = 19/126 (15%), Positives = 42/126 (33%), Gaps = 17/126 (13%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLV-- 62
QT GH+ + + + P G ++ +D RL+ + + + + +
Sbjct: 220 QTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFS 279
Query: 63 ----------EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA 112
+D N +W GH + + G +A+ S+D+
Sbjct: 280 KSGRLLLAGYDDFNCNVWDALKADRAGVLA-----GHDNRVSCLGVTDDGMAVATGSWDS 334
Query: 113 TTAVWD 118
+W+
Sbjct: 335 FLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 62.4 bits (150), Expect = 2e-11
Identities = 36/236 (15%), Positives = 68/236 (28%), Gaps = 30/236 (12%)
Query: 110 FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 169
T + Q TL GH ++ ++ W + + L + S+D + +W+
Sbjct: 31 SQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDS---YTT 87
Query: 170 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW 229
I V + P N +A D+ ++ E + L HT +
Sbjct: 88 NKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLS 147
Query: 230 SLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI 289
F + + D E T H + +
Sbjct: 148 CCRFLDDNQIVTSSGDTTCALWDIE-----------------TGQQTTTFTGHTGDVMSL 190
Query: 290 SWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 345
S T L + D + +++ D+ T H D+N + + P
Sbjct: 191 SLAPDTRLFVSGACDASAKLW---------DVREGMCRQT-FTGHESDINAICFFP 236
|
| >d1nmpa_ c.135.1.1 (A:) Hypothetical protein YbgI {Escherichia coli [TaxId: 562]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NIF3 (NGG1p interacting factor 3)-like superfamily: NIF3 (NGG1p interacting factor 3)-like family: NIF3 (NGG1p interacting factor 3)-like domain: Hypothetical protein YbgI species: Escherichia coli [TaxId: 562]
Score = 97.8 bits (243), Expect = 9e-24
Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 355 LTLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGT 414
+ ++ + + + + GL +E + ++ I+ + + +L EAV G
Sbjct: 1 MKNTELEQLINEKLNSAAISDYAPNGLQVEG---KETVQKIVTGVTASQALLDEAVRLGA 57
Query: 415 DLIIAYHPPIFAPLKRVTNDKWKERVVSTCLAHNIAVYSPHTTWDAIQEG 464
D +I +H + V K + T LA++I +Y H DA E
Sbjct: 58 DAVIVHHGYFWKGESPVIRG-MKRNRLKTLLANDINLYGWHLPLDAHPEL 106
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 100 bits (248), Expect = 1e-23
Identities = 56/277 (20%), Positives = 101/277 (36%), Gaps = 29/277 (10%)
Query: 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQL 61
+N+ + + +V ++P G +++ ED+ IR+W + R+ L G +
Sbjct: 112 LNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDY 171
Query: 62 VEDKNIRLWGKESFGNKFT-----AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 116
+ + G + ++ G +IA+ S D V
Sbjct: 172 FPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRV 231
Query: 117 WDKRSGQFEC-----NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE--- 168
WD +G N + GH++ V SV ++++GQ + + S D+SV +W + +
Sbjct: 232 WDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSD 291
Query: 169 ------YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLK 222
C H V V D + S S D V + + L+
Sbjct: 292 SKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNP----LLMLQ 347
Query: 223 SHTSTVWSLA------FDRIGSRLATCSDDATVKIWK 253
H ++V S+A + AT S D +IWK
Sbjct: 348 GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 90.2 bits (222), Expect = 3e-20
Identities = 49/349 (14%), Positives = 103/349 (29%), Gaps = 42/349 (12%)
Query: 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQL 61
+ H V V ++ G +++ G +K +++ + +L
Sbjct: 53 VELHKSLDHTSVVCCVKFSNDGEYLAT-GCNKTTQVYRVSDGSLVARLSD---------- 101
Query: 62 VEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 121
+ + S IR +SP G F+A+ + D +WD +
Sbjct: 102 ---------DSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIEN 152
Query: 122 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 181
+ + S + + R +W G+
Sbjct: 153 RKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI-----EDGV 207
Query: 182 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI---NFATLKSHTSTVWSLAFDRIGS 238
+A+ S D V+++ + + H +V+S+ F R G
Sbjct: 208 TTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQ 267
Query: 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI 298
+ + S D +VK+W N + TP++ + H + ++ + I
Sbjct: 268 SVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI----GHKDFVLSVATTQNDEYI 323
Query: 299 ATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347
+ D + + D S + + + H V VA
Sbjct: 324 LSGSKDRGVLFW---------DKKSGNPLLM-LQGHRNSVISVAVANGS 362
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 76.0 bits (185), Expect = 1e-15
Identities = 33/166 (19%), Positives = 56/166 (33%), Gaps = 33/166 (19%)
Query: 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVE 63
+++ GH+ V++V + G + S D++++LW + T +
Sbjct: 247 NESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIG 306
Query: 64 DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 123
K+ + A + +I S S D WDK+SG
Sbjct: 307 HKDF-------------------------VLSVATTQNDEYILSGSKDRGVLFWDKKSGN 341
Query: 124 FECNATLEGHENEVKSV------TWSKNGQFLATCSRDKSVWVWEV 163
L+GH N V SV + AT S D +W+
Sbjct: 342 --PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.8 bits (104), Expect = 1e-05
Identities = 17/111 (15%), Positives = 32/111 (28%), Gaps = 3/111 (2%)
Query: 194 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 253
+D L+ + HTS V + F G LAT + T ++++
Sbjct: 31 ALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGCNK-TTQVYR 89
Query: 254 --EYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302
+ + N + S I + + +AT
Sbjct: 90 VSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGA 140
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.6 bits (88), Expect = 0.001
Identities = 20/118 (16%), Positives = 33/118 (27%), Gaps = 31/118 (26%)
Query: 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQ 60
T GH+ V +V+ I S +D+ + W P L G
Sbjct: 298 GTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG--------- 348
Query: 61 LVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD 118
N + A+ + ++ P N A+ S D +W
Sbjct: 349 --------------HRNSVISVAVANG--------SSLGPEYNVFATGSGDCKARIWK 384
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 87.2 bits (214), Expect = 2e-19
Identities = 42/250 (16%), Positives = 86/250 (34%), Gaps = 5/250 (2%)
Query: 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 148
I AW+ IA + +++K ++ L+ H +V V W+ +
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 65
Query: 149 LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE 208
+ TC D++ +VW + + ++ VI + + VR+ P + A S + +
Sbjct: 66 IVTCGTDRNAYVWTL-KGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYF 124
Query: 209 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPT--- 265
++ W+ K STV SL + LA S D +I+ Y
Sbjct: 125 EQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPW 184
Query: 266 PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFD 325
+ + S G ++ + + +A D + + + + + + S
Sbjct: 185 GSKMPFGELMFESSSSCGW-VHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET 243
Query: 326 LVHTEHRAHN 335
L
Sbjct: 244 LPLLAVTFIT 253
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 66.8 bits (161), Expect = 1e-12
Identities = 60/333 (18%), Positives = 104/333 (31%), Gaps = 48/333 (14%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
LK H G+V V W P I +CG D+N +W + R L L + + R +
Sbjct: 45 HELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWA 104
Query: 65 KNIRLWGKESFG-----------NKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDAT 113
N + + S N + + + T+ W P +A+ S D
Sbjct: 105 PNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFK 164
Query: 114 TAVWDKRSGQFE----------------CNATLEGHENEVKSVTWSKNGQFLATCSRDKS 157
++ + E V V +S NG +A S D +
Sbjct: 165 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDST 224
Query: 158 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 217
V + + D+ A + + + V F +++A+ D LF D A
Sbjct: 225 VCLADA---DKKMAVATLASETLPLLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKL-- 278
Query: 218 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT 277
+ + + +R + D G AG+ + +SV +
Sbjct: 279 --SFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAG--AGLDSLHKNSVS-QISV 333
Query: 278 LSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 310
LSG + T D + I+
Sbjct: 334 LSGGKAK----------CSQFCTTGMDGGMSIW 356
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 66.0 bits (159), Expect = 2e-12
Identities = 54/361 (14%), Positives = 104/361 (28%), Gaps = 64/361 (17%)
Query: 14 VWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKE 73
+ +WN T I+ C + + ++ E
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIY----------------------------------E 35
Query: 74 SFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGH 133
GNK+ L H + W+P N I + D VW + ++ +
Sbjct: 36 KSGNKWVQVHELK-EHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRI 94
Query: 134 ENEVKSVTWSKNGQFLATCSRDKSVWVWEV-GEEDEYECAAVINAHIQDVKKVRFHPFDN 192
+ V W+ N + A S + + + E D + C + V + +HP
Sbjct: 95 NRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV 154
Query: 193 ILASASYDDTVKLFKEDKAEADWINFA--------------TLKSHTSTVWSLAFDRIGS 238
+LA+ S D ++F E + S V + F GS
Sbjct: 155 LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS 214
Query: 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT----LSGHHGRTIYDISWCHL 294
R+A S D+TV + K A + + + T ++ H ++
Sbjct: 215 RVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSA 274
Query: 295 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHT----------EHRAHNQDVNCVAWN 344
++ D + + + D + H V+ ++
Sbjct: 275 AGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVL 334
Query: 345 P 345
Sbjct: 335 S 335
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.6 bits (184), Expect = 1e-15
Identities = 63/348 (18%), Positives = 114/348 (32%), Gaps = 47/348 (13%)
Query: 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKL--HGLPVETSLRQL 61
+ LKGH V G I S +D +++W V + L H V S +
Sbjct: 9 PKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV-WSSQMR 66
Query: 62 VEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 121
+ + + T + S S DAT VWD +
Sbjct: 67 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET 126
Query: 122 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 181
GQ C L GH V +G+ + + + D V VW+ + C + H
Sbjct: 127 GQ--CLHVLMGHVAAV--RCVQYDGRRVVSGAYDFMVKVWDP---ETETCLHTLQGHTNR 179
Query: 182 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 241
V ++F + S S D +++++ + TL H S + + L
Sbjct: 180 VYSLQFDG--IHVVSGSLDTSIRVWDVE----TGNCIHTLTGHQSLTSGMELK--DNILV 231
Query: 242 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA 301
+ + D+TVKIW + +C+ TL G + + + T+
Sbjct: 232 SGNADSTVKIW---------------DIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITS 276
Query: 302 CGDDAIRIFKENPEAGDSDMVSFDLVHT----EHRAHNQDVNCVAWNP 345
D ++++ D+ + + + E V + +
Sbjct: 277 SDDGTVKLW---------DLKTGEFIRNLVTLESGGSGGVVWRIRASN 315
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.5 bits (168), Expect = 1e-13
Identities = 54/306 (17%), Positives = 88/306 (28%), Gaps = 24/306 (7%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
+TL GH G VW+ + S + H V + +
Sbjct: 51 RTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTV-RCMHLHEKR 109
Query: 65 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 124
L G + S ++D VWD
Sbjct: 110 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPE--TE 167
Query: 125 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 184
C TL+GH N + + +G + + S D S+ VW+V + C + H
Sbjct: 168 TCLHTLQGHTN--RVYSLQFDGIHVVSGSLDTSIRVWDV---ETGNCIHTLTGHQSLTSG 222
Query: 185 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244
+ NIL S + D TVK++ + + + T S
Sbjct: 223 MELKD--NILVSGNADSTVKIWDIKT---GQCLQTLQGPNKHQSAVTCLQFNKNFVITSS 277
Query: 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 304
DD TVK+W + + V SG G ++ I + + A +
Sbjct: 278 DDGTVKLWD-----------LKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 326
Query: 305 DAIRIF 310
Sbjct: 327 GTEETK 332
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.8 bits (156), Expect = 5e-12
Identities = 46/256 (17%), Positives = 85/256 (33%), Gaps = 26/256 (10%)
Query: 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETS--------LRQL 61
+ + + S D +R+W + + L G +
Sbjct: 94 YGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSG 153
Query: 62 VEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 121
D +++W E+ T + GH T R + G + S S D + VWD
Sbjct: 154 AYDFMVKVWDPETETCLHTLQ-----GH--TNRVYSLQFDGIHVVSGSLDTSIRVWDVE- 205
Query: 122 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 181
C TL GH++ + L + + D +V +W++ + N H
Sbjct: 206 -TGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 262
Query: 182 VKKVRFHPFDNILASASYDDTVKLFK-EDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240
V ++F+ N + ++S D TVKL+ + + VW +
Sbjct: 263 VTCLQFNK--NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVC 320
Query: 241 ATCSDDAT----VKIW 252
A S + T + +
Sbjct: 321 AVGSRNGTEETKLLVL 336
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.6 bits (145), Expect = 1e-10
Identities = 38/172 (22%), Positives = 68/172 (39%), Gaps = 21/172 (12%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQL--- 61
TL+GH RV+++ ++ G + S D +IR+W + L G TS +L
Sbjct: 171 HTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN 228
Query: 62 -----VEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 116
D +++W ++ T + ++ T NF+ ++S D T +
Sbjct: 229 ILVSGNADSTVKIWDIKTGQCLQTLQ----GPNKHQSAVTCLQFNKNFVITSSDDGTVKL 284
Query: 117 WDKRSGQFECN---ATLEGHENEVKSVTWSKNGQFLATCSRDKS----VWVW 161
WD ++G+F N G V + S A SR+ + + V
Sbjct: 285 WDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVL 336
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.5 bits (98), Expect = 6e-05
Identities = 22/129 (17%), Positives = 40/129 (31%), Gaps = 17/129 (13%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLV-- 62
TL GHQ + ++ S D +++W + + + L G S +
Sbjct: 211 HTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF 268
Query: 63 ---------EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDAT 113
+D ++LW ++ + S G + S A S + T
Sbjct: 269 NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 328
Query: 114 TA----VWD 118
V D
Sbjct: 329 EETKLLVLD 337
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.2 bits (175), Expect = 1e-14
Identities = 45/255 (17%), Positives = 83/255 (32%), Gaps = 18/255 (7%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
+ L GH G V + ++ + + S + H V
Sbjct: 49 RILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMM 108
Query: 65 KNIRLWGKESF--GNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 122
+ T + +I SAS D T VW+ +
Sbjct: 109 VTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTC 168
Query: 123 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 182
+F TL GH+ + + + + S D ++ +W D A + +
Sbjct: 169 EFVR--TLNGHKRGIA--CLQYRDRLVVSGSSDNTIRLW-----DIECGACLRVLEGHEE 219
Query: 183 KKVRFHPFDNILASASYDDTVKLF-----KEDKAEADWINFATLKSHTSTVWSLAFDRIG 237
+ + S +YD +K++ + +A A + TL H+ V+ L FD
Sbjct: 220 LVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--E 277
Query: 238 SRLATCSDDATVKIW 252
++ + S D T+ IW
Sbjct: 278 FQIVSSSHDDTILIW 292
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.4 bits (147), Expect = 4e-11
Identities = 41/305 (13%), Positives = 93/305 (30%), Gaps = 22/305 (7%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
V+ + ++ I S D I++W E L G Q E
Sbjct: 9 HCRSETSKGVYCLQYD--DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDER 66
Query: 65 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 124
I + + + N + + +
Sbjct: 67 VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT 126
Query: 125 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 184
+ + + +++ + S D+++ VW E +N H + +
Sbjct: 127 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNT---STCEFVRTLNGHKRGIAC 183
Query: 185 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244
+++ ++ S S D+T++L+ + + + + R+ + +
Sbjct: 184 LQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF------DNKRIVSGA 235
Query: 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 304
D +K+W + P + C+ TL H GR ++ + + I ++ D
Sbjct: 236 YDGKIKVW------DLVAALDPRAPAGTLCLRTLVEHSGR-VFRLQFDE--FQIVSSSHD 286
Query: 305 DAIRI 309
D I I
Sbjct: 287 DTILI 291
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.6 bits (137), Expect = 9e-10
Identities = 40/272 (14%), Positives = 67/272 (24%), Gaps = 35/272 (12%)
Query: 96 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 155
I S D T +WDK + + C L GH V + + + +
Sbjct: 19 YCLQYDDQKIVSGLRDNTIKIWDKNTLE--CKRILTGHTGSVLCLQYDERVIITGSSDST 76
Query: 156 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 215
VW GE + A +D D
Sbjct: 77 VRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASP--------TDI 128
Query: 216 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP---GNSAGIPTPDNDSVW 272
L H + V + FD + + S D T+K+W G +
Sbjct: 129 TLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 186
Query: 273 KCVCTLSGHHGRTIY-------------------DISWCHLTDLIATACGDDAIRIFKEN 313
+ +SG TI I + D I+++
Sbjct: 187 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLV 246
Query: 314 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 345
+ T H+ V + ++
Sbjct: 247 AALDPRAPAGTLCLRT-LVEHSGRVFRLQFDE 277
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.7 bits (127), Expect = 1e-08
Identities = 31/168 (18%), Positives = 50/168 (29%), Gaps = 24/168 (14%)
Query: 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL--------PVETSLRQL 61
R + I S D+ I++W E L+G + +
Sbjct: 135 VGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSG 194
Query: 62 VEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 121
D IRLW E A L I S ++D VWD +
Sbjct: 195 SSDNTIRLWDIECG-------ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVA 247
Query: 122 GQ-------FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162
C TL H V + + + + + S D ++ +W+
Sbjct: 248 ALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 293
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.2 bits (92), Expect = 3e-04
Identities = 24/126 (19%), Positives = 41/126 (32%), Gaps = 16/126 (12%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLV-- 62
+TL GH+ + + + + ++ S D IRLW + L G +
Sbjct: 172 RTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 229
Query: 63 ------EDKNIRLWGKESFGNKFTAKAILS----DGHQRTIRETAWSPCGNFIASASFDA 112
D I++W + + L H + I S+S D
Sbjct: 230 RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRV--FRLQFDEFQIVSSSHDD 287
Query: 113 TTAVWD 118
T +WD
Sbjct: 288 TILIWD 293
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 73.0 bits (177), Expect = 1e-14
Identities = 41/370 (11%), Positives = 102/370 (27%), Gaps = 69/370 (18%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
K H +++VS + SC D +++W + + P + S V
Sbjct: 8 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDN-----ENPKDKSYSHFVHK 60
Query: 65 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQ 123
+ H ++ +A+ SF +
Sbjct: 61 SGLH--------------------HVDVLQAIERDAFELCLVATTSFSGDLLFYRITRED 100
Query: 124 FE--------CNATLEGHENEVKSVTWSKNG-----QFLATCSRDKSVWVWEV------- 163
+ ++ ++ W + L + ++W+
Sbjct: 101 ETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADES 160
Query: 164 --------GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 215
+ Q V ++A+ + TV++ + +
Sbjct: 161 NSLTLNWSPTLELQGTVESPMTPSQFATSVDISE-RGLIATGFNNGTVQISELSTLRPLY 219
Query: 216 INF--ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 273
++ ++++++ S+ F GS LA D + Y+ I + +
Sbjct: 220 NFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSS 279
Query: 274 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRA 333
H + +S+ + + +A D +R + D+ + + + T
Sbjct: 280 QASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFW---------DVKTKERITT-LNM 329
Query: 334 HNQDVNCVAW 343
H D+
Sbjct: 330 HCDDIEIEED 339
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 59.1 bits (141), Expect = 4e-10
Identities = 37/312 (11%), Positives = 100/312 (32%), Gaps = 40/312 (12%)
Query: 18 SWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGN 77
+ ++++ ++ + + + +K+ + L ++ + + +
Sbjct: 74 RDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKL-DLLDSDMKKHSFWALKWGASND 132
Query: 78 KFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEV 137
+ + +++ + T + P + S + + + + + + + +
Sbjct: 133 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVE-----SPMTPSQFA 187
Query: 138 KSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVR---FHPFDNIL 194
SV S+ G +AT + +V + E+ ++ I + +R F P ++L
Sbjct: 188 TSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLL 246
Query: 195 ASASYDDTVKLFK------------EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242
A A ++ +H+S V SL+F+ G L +
Sbjct: 247 AIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCS 306
Query: 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR---TIYDISWCHLTDLIA 299
D ++ W + + + TL+ H ++ D +A
Sbjct: 307 AGWDGKLRFW---------------DVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLA 351
Query: 300 TACGDDAIRIFK 311
D + K
Sbjct: 352 EPGVFDVKFLKK 363
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 58.7 bits (140), Expect = 5e-10
Identities = 33/319 (10%), Positives = 70/319 (21%), Gaps = 40/319 (12%)
Query: 79 FTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNA----TLEGHE 134
F A A H I + +F S S D VWD + E + H+
Sbjct: 3 FIATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHK 60
Query: 135 NEVKSVTW-------SKNGQFLATCSRDKSVWVWEVGEED-------EYECAAVINAHIQ 180
+ + V + +AT S + + + ED E +
Sbjct: 61 SGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKH 120
Query: 181 DVKKVRFHPFDN-----ILASASYDDTVKL--------------FKEDKAEADWINFATL 221
+++ ++ L + T + +
Sbjct: 121 SFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESP 180
Query: 222 KSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH 281
+ + S+ G +AT ++ TV+I + + +
Sbjct: 181 MTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKF 239
Query: 282 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV 341
+ + + +
Sbjct: 240 SPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFND 299
Query: 342 AWNPVVPEPQKTNLTLHDV 360
+ + L DV
Sbjct: 300 SGETLCSAGWDGKLRFWDV 318
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 71.8 bits (174), Expect = 3e-14
Identities = 12/174 (6%), Positives = 32/174 (18%), Gaps = 17/174 (9%)
Query: 88 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECN-----ATLEGHENEVKSVTW 142
A+ + S+ + D+ F +
Sbjct: 176 TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKL 235
Query: 143 SKNGQFLATCSRDKSV----WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 198
D + + +Y + + I F A
Sbjct: 236 VPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAP 295
Query: 199 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 252
+ + + + + + L + DD + +
Sbjct: 296 EKGVLLKYDVKTRK--------VTEVKNNLTDLRLSADRKTVMVRKDDGKIYTF 341
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 62.6 bits (150), Expect = 3e-11
Identities = 25/322 (7%), Positives = 60/322 (18%), Gaps = 40/322 (12%)
Query: 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVM------VIREPYEKLHGLPVETSLRQLV 62
R+ V + G + L + + + +
Sbjct: 40 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKF 99
Query: 63 EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 122
+ + + ++ + I + S FIA
Sbjct: 100 AVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQ 159
Query: 123 Q-------FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA--- 172
+ + + + + L S + +
Sbjct: 160 AIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSK 219
Query: 173 -AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW---INFATLKSHTSTV 228
VI + P + YD + D L+S
Sbjct: 220 PFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIY 279
Query: 229 WSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYD 288
+ + + + D + V + + + D
Sbjct: 280 SVPVHGEFAAYYQGAPEKGVLLKY----------------DVKTRKVTEVKNN----LTD 319
Query: 289 ISWCHLTDLIATACGDDAIRIF 310
+ + D I F
Sbjct: 320 LRLSADRKTVMVRKDDGKIYTF 341
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 58.7 bits (140), Expect = 4e-10
Identities = 11/179 (6%), Positives = 40/179 (22%), Gaps = 25/179 (13%)
Query: 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLR--------- 59
+ +++ + V+ ++ P L
Sbjct: 176 TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKL 235
Query: 60 ----QLVEDKNIRLWGKESFGNKFTA------KAILSDGHQRTIRETAWSPCGNFIASAS 109
E L + I + + A
Sbjct: 236 VPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAP 295
Query: 110 FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 168
+D ++ + + +N + + S + + + D ++ + + + ++
Sbjct: 296 EKGVLLKYDVKTRK------VTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPED 348
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 41.0 bits (94), Expect = 2e-04
Identities = 17/257 (6%), Positives = 51/257 (19%), Gaps = 34/257 (13%)
Query: 96 TAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 154
+SP G+ IA S + D ++ V + +
Sbjct: 8 EDFSPLDGDLIAFVSRG-QAFIQDVSGTY----VLKVPEPLRIRYVRRGGDTKVAFIHGT 62
Query: 155 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEAD 214
+ ++ + + +K + + + + D+ E
Sbjct: 63 REGDFLG------------IYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIM 110
Query: 215 WINFAT------LKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDN 268
++ T +S + + +A + +
Sbjct: 111 TVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYV-------MQAIHV 163
Query: 269 DSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVH 328
+ + Y ++ + + + +
Sbjct: 164 YDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSP--DRVVLNFSFEVVSKPF 221
Query: 329 TEHRAHNQDVNCVAWNP 345
N P
Sbjct: 222 V-IPLIPGSPNPTKLVP 237
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 37.9 bits (86), Expect = 0.002
Identities = 2/37 (5%), Positives = 14/37 (37%)
Query: 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLW 38
+ ++ + + + ++ + + +D I +
Sbjct: 305 VKTRKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTF 341
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.8 bits (169), Expect = 1e-13
Identities = 32/256 (12%), Positives = 76/256 (29%), Gaps = 13/256 (5%)
Query: 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQL 61
++ + + P G + GE + +W + P K + L
Sbjct: 88 VSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYAL 147
Query: 62 VEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 121
+ ++ + + R + I++ T D
Sbjct: 148 AISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTV 207
Query: 122 GQFECNATLE----GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA 177
++ + +++ S+ + G++LA +V V V + D+Y+ +
Sbjct: 208 RSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL----HL 263
Query: 178 HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG 237
H V ++F S D+ + ++ +S+V S
Sbjct: 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA-----SIFQSKESSSVLSCDISVDD 318
Query: 238 SRLATCSDDATVKIWK 253
+ T S D +++
Sbjct: 319 KYIVTGSGDKKATVYE 334
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.4 bits (155), Expect = 6e-12
Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 148
H+ + ++ CG + S D W G + V S S + ++
Sbjct: 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS---IFQSKESSSVLSCDISVDDKY 320
Query: 149 LATCSRDKSVWVWEV 163
+ T S DK V+EV
Sbjct: 321 IVTGSGDKKATVYEV 335
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.5 bits (150), Expect = 3e-11
Identities = 27/293 (9%), Positives = 64/293 (21%), Gaps = 44/293 (15%)
Query: 80 TAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE---CNATLEGHENE 136
A+ I + H + S + + VWD + +N
Sbjct: 41 HARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNY 99
Query: 137 VKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 196
++S +G L ++ +W++ A + ++
Sbjct: 100 IRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVC--- 156
Query: 197 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 256
+ + + HT + G++L T D TV+ W +
Sbjct: 157 --FSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLRE 214
Query: 257 PGNSAGIPTPDN------------------------DSVWKCVCTLSGHHGRTIYDISWC 292
V K H + + +
Sbjct: 215 GRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFA 274
Query: 293 HLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 345
+ + D+ + + + + V +
Sbjct: 275 YCGKWFVSTGKDNLLNAW---------RTPYGASIFQSK--ESSSVLSCDISV 316
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.2 bits (144), Expect = 1e-10
Identities = 30/309 (9%), Positives = 69/309 (22%), Gaps = 29/309 (9%)
Query: 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVE------TSLRQLV 62
H V V+ + + + G +++W + + L S + L
Sbjct: 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP 107
Query: 63 EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 122
+ + + G+ S + + A + + +
Sbjct: 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV 167
Query: 123 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 182
N TL + T + + + +
Sbjct: 168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQI 227
Query: 183 KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242
+ + P ++ + + + L H S V SL F G +
Sbjct: 228 FSLGYCPTGEW-----LAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVS 282
Query: 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302
D + W + ++ I T
Sbjct: 283 TGKDNLLNAW---------------RTPYGASIFQS--KESSSVLSCDISVDDKYIVTGS 325
Query: 303 GDDAIRIFK 311
GD +++
Sbjct: 326 GDKKATVYE 334
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.2 bits (105), Expect = 9e-06
Identities = 16/95 (16%), Positives = 28/95 (29%), Gaps = 6/95 (6%)
Query: 107 SASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 166
DA R + TL H V +VT S + + T V VW++
Sbjct: 27 PFPPDALIGPGIPRHAR--QINTL-NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHP 82
Query: 167 DEYECAAVIN--AHIQDVKKVRFHPFDNILASASY 199
+ ++ ++ + P L
Sbjct: 83 GNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE 117
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 65.6 bits (158), Expect = 3e-12
Identities = 36/337 (10%), Positives = 81/337 (24%), Gaps = 43/337 (12%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKL-----HGLPV----- 54
Q + + + ++ P +++ D ++ ++ I+ L + P+
Sbjct: 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNF 64
Query: 55 ----ETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF 110
+ + I + ++ I +
Sbjct: 65 IDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLI 124
Query: 111 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV-GEEDEY 169
+ N + + K T N L + V + + ED+
Sbjct: 125 EVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDN 184
Query: 170 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI-----------NF 218
Q A +S D V + D D+
Sbjct: 185 GTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLN 244
Query: 219 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 278
+ V S+ F L T D + W N K +
Sbjct: 245 LKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCW---------------NLQTRKKIKNF 289
Query: 279 SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 315
+ + ++ I+ +++ A DD + +
Sbjct: 290 AKFNEDSVVKIACSD--NILCLATSDDTFKTNAAIDQ 324
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 59.9 bits (143), Expect = 2e-10
Identities = 24/263 (9%), Positives = 70/263 (26%), Gaps = 9/263 (3%)
Query: 85 LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECN-ATLEGHENEVKSVTWS 143
+ + I + P + + S+D + V+ + +++ + +
Sbjct: 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFI 65
Query: 144 KN-GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT 202
N + + + ++ ++ A++ + ++ I AS
Sbjct: 66 DNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIE 125
Query: 203 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAG 262
V + + + D SRL +++ V+ ++ + G
Sbjct: 126 VIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNG 185
Query: 263 IPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMV 322
L + +A DD + +
Sbjct: 186 TIEESGLKYQIRDVALLPKEQEGYA---CSSIDGRVAVEFFDDQGDDYN----SSKRFAF 238
Query: 323 SFDLVHTEHRAHNQDVNCVAWNP 345
++ + VN + ++P
Sbjct: 239 RCHRLNLKDTNLAYPVNSIEFSP 261
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 47.2 bits (110), Expect = 3e-06
Identities = 14/158 (8%), Positives = 38/158 (24%), Gaps = 25/158 (15%)
Query: 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRL 69
+ + D + + +D+
Sbjct: 193 KYQIRDVALLPKEQEGYACSSIDGRVAVE----------------------FFDDQGDDY 230
Query: 70 WGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNAT 129
+ F + + + +SP F+ +A D + W+ ++ +
Sbjct: 231 NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK--KIKN 288
Query: 130 LEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 167
NE V + + L + D + ++
Sbjct: 289 FAKF-NEDSVVKIACSDNILCLATSDDTFKTNAAIDQT 325
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 37.9 bits (86), Expect = 0.002
Identities = 16/140 (11%), Positives = 34/140 (24%), Gaps = 44/140 (31%)
Query: 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQ 60
+ V ++ ++P+ + + G D I W
Sbjct: 241 HRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCW---------------------- 278
Query: 61 LVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR 120
N T K I + + N + A+ D T
Sbjct: 279 ----------------NLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAA- 321
Query: 121 SGQFECNATLEGHENEVKSV 140
+ T+E + + + +
Sbjct: 322 -----IDQTIELNASSIYII 336
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 58.8 bits (140), Expect = 4e-10
Identities = 40/346 (11%), Positives = 77/346 (22%), Gaps = 24/346 (6%)
Query: 6 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKL--HGLPVE----TSLR 59
TL+GH V + + + +DK IR++ + ++ +L H V
Sbjct: 7 TLRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG 65
Query: 60 QLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDK 119
LV R + +I + S D T VW
Sbjct: 66 ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKL 125
Query: 120 RSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI 179
+ E V SV I
Sbjct: 126 PKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--------SGHGNIVVSG 177
Query: 180 QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239
+ + + + + T+ +
Sbjct: 178 SYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMY 237
Query: 240 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA 299
+ K SA +H + I+ +++D I
Sbjct: 238 TLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNIL 297
Query: 300 TACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 345
+ ++ I+ ++ S LVH + V +
Sbjct: 298 VSGSENQFNIY---------NLRSGKLVHANILKDADQIWSVNFKG 334
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 55.7 bits (132), Expect = 5e-09
Identities = 27/223 (12%), Positives = 67/223 (30%), Gaps = 12/223 (5%)
Query: 128 ATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF 187
TL GH V + ++ T + DK + V++ + ++ H V +++
Sbjct: 6 TTLRGHMTSVITC-LQFEDNYVITGADDKMIRVYDS---INKKFLLQLSGHDGGVWALKY 61
Query: 188 HPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 247
IL S S D TV+++ K + + + + T S D
Sbjct: 62 AH-GGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIV--EYKNIKYIVTGSRDN 118
Query: 248 TVKIW-----KEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302
T+ +W + + + G + +++ +
Sbjct: 119 TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGS 178
Query: 303 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 345
D+ + ++ + ++ C++ +
Sbjct: 179 YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASM 221
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.0 bits (112), Expect = 1e-06
Identities = 28/159 (17%), Positives = 57/159 (35%), Gaps = 5/159 (3%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVED 64
L GH R+++ ++ + S D IR+W + E L G L +L +
Sbjct: 195 YILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDK 254
Query: 65 KNIRLWGKESFGNKFTAKAILSDGHQRT--IRETAWSPCGNFIASASFDATTAVWDKRSG 122
+ S + T T + N + S S + +++ RSG
Sbjct: 255 FLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSG 313
Query: 123 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161
+ +A + +++ SV + +A +D ++
Sbjct: 314 K-LVHANILKDADQIWSVNFKGKT-LVAAVEKDGQSFLE 350
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.9 bits (104), Expect = 1e-05
Identities = 35/310 (11%), Positives = 79/310 (25%), Gaps = 68/310 (21%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLV-- 62
L GH G VW + + G ++S + + + L +
Sbjct: 47 LQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYK 106
Query: 63 ---------EDKNIRLWGKES----------------FGNKFTAKAILSDGHQRTIRETA 97
D + +W F +
Sbjct: 107 NIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRT 166
Query: 98 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 157
S GN + S S+D T + Q +C L GH + + S + + + S D +
Sbjct: 167 VSGHGNIVVSGSYDNT--LIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTT 224
Query: 158 VWV-----------------------------------WEVGEEDEYECAAVINAHIQDV 182
+ + + D + + + H ++
Sbjct: 225 IRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNL 284
Query: 183 KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242
+ + + + ++ ++ + A + +WS+ F + +A
Sbjct: 285 SAITTFYVSDNILVSGSENQFNIYNLRSGKLVH---ANILKDADQIWSVNFKG-KTLVAA 340
Query: 243 CSDDATVKIW 252
D +
Sbjct: 341 VEKDGQSFLE 350
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 42.2 bits (97), Expect = 1e-04
Identities = 20/191 (10%), Positives = 43/191 (22%), Gaps = 4/191 (2%)
Query: 19 WNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNK 78
+ G ++ S D + +W + + L G ++ + +
Sbjct: 167 VSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIR 226
Query: 79 FTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVK 138
+ A H N
Sbjct: 227 IWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSA 286
Query: 139 SVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 198
T+ + L + S + ++ + A I + V F ++A+
Sbjct: 287 ITTFYVSDNILVSGS-ENQFNIYNL--RSGKLVHANILKDADQIWSVNFKG-KTLVAAVE 342
Query: 199 YDDTVKLFKED 209
D L D
Sbjct: 343 KDGQSFLEILD 353
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 55.4 bits (131), Expect = 4e-09
Identities = 33/287 (11%), Positives = 77/287 (26%), Gaps = 46/287 (16%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLW-------------------------- 38
+T+ GH + ++ NP + S D I W
Sbjct: 7 KTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSS 62
Query: 39 ----VMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 94
+ K + L + + + +
Sbjct: 63 ISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSP 122
Query: 95 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 154
+A S N++A + T K S + ++ S + ++A
Sbjct: 123 GSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDV 182
Query: 155 DKSVWVWEVGEEDEYECAAVINAHIQD--------VKKVRFHPFDNILASASYDDTVKLF 206
+ ++++ + + ++++A+ S D + ++
Sbjct: 183 MGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIY 242
Query: 207 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 253
+ L +H V +L ++ S L + DA +K W
Sbjct: 243 SVKRPMK---IIKALNAHKDGVNNLLWET-PSTLVSSGADACIKRWN 285
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 49.2 bits (115), Expect = 4e-07
Identities = 11/75 (14%), Positives = 24/75 (32%), Gaps = 2/75 (2%)
Query: 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 148
+ +A+ S D ++ + + L H++ V ++ W
Sbjct: 214 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM-KIIKALNAHKDGVNNLLWETPST- 271
Query: 149 LATCSRDKSVWVWEV 163
L + D + W V
Sbjct: 272 LVSSGADACIKRWNV 286
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 46.5 bits (108), Expect = 3e-06
Identities = 33/278 (11%), Positives = 64/278 (23%), Gaps = 40/278 (14%)
Query: 88 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 147
GH + I +P + S S+D W S + H N + S+ SK +
Sbjct: 11 GHNKGITALTVNP----LISGSYDGRIMEWSSSSM-------HQDHSNLIVSLDNSKAQE 59
Query: 148 FLATCSRDKSVWVWEVGEEDEYECAAVI----------------NAHIQDVKKVRFHPFD 191
+ + D E + +
Sbjct: 60 YSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRL 119
Query: 192 NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKI 251
N SA + + F S S ++ + +
Sbjct: 120 NSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAA 179
Query: 252 WKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDL----IATACGDDAI 307
+ + + + T + + ++ +AT D I
Sbjct: 180 GDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNI 239
Query: 308 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 345
I+ + + AH VN + W
Sbjct: 240 FIY---------SVKRPMKIIKALNAHKDGVNNLLWET 268
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.8 bits (88), Expect = 8e-04
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 12/68 (17%)
Query: 122 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 181
G E T+ GH + ++T + L + S D + W + H
Sbjct: 1 GHDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQ--------DHSNL 48
Query: 182 VKKVRFHP 189
+ +
Sbjct: 49 IVSLDNSK 56
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 55.0 bits (130), Expect = 5e-09
Identities = 32/292 (10%), Positives = 71/292 (24%), Gaps = 46/292 (15%)
Query: 5 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREP---YEKLHGLPV------- 54
Q GH + +S + G + S + +I W + + +H +
Sbjct: 6 QVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTS 65
Query: 55 ---------------------ETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 93
+ V +K + H
Sbjct: 66 KGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIY 125
Query: 94 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC- 152
+ S+ + G + + S + T
Sbjct: 126 SHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSV 185
Query: 153 ------------SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD 200
+ + V + V E H V V + P + LA+ S D
Sbjct: 186 AFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLD 245
Query: 201 DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 252
++V ++ + + +H + + + + + D+ +K W
Sbjct: 246 NSVIVW--NMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFW 295
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 50.8 bits (119), Expect = 2e-07
Identities = 13/169 (7%), Positives = 37/169 (21%), Gaps = 4/169 (2%)
Query: 125 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 184
+ GH + +++ S +G+ L + + + W++ + H +
Sbjct: 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDI--STGISNRVFPDVHATMITG 60
Query: 185 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 244
++ ++ + D + +S LA G
Sbjct: 61 IKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAV--ANKLSSQPLGLAVSADGDIAVAAC 118
Query: 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 293
+ G ++
Sbjct: 119 YKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSG 167
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 48.4 bits (113), Expect = 7e-07
Identities = 14/75 (18%), Positives = 26/75 (34%)
Query: 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 148
H + +WSP +A+ S D + VW+ H + N
Sbjct: 223 HTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT 282
Query: 149 LATCSRDKSVWVWEV 163
+ + +D ++ W V
Sbjct: 283 IVSAGQDSNIKFWNV 297
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 51.7 bits (122), Expect = 8e-08
Identities = 17/267 (6%), Positives = 56/267 (20%), Gaps = 22/267 (8%)
Query: 97 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL-ATCSRD 155
A ++ ++ V D S + + + + + + + +
Sbjct: 3 ALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVM-PDKFGPGTAMMAPDNRTAYVLNNHY 61
Query: 156 KSVWVWEVG---EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 212
++ ++ ++V + + P + +
Sbjct: 62 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKP 121
Query: 213 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 272
F+T + L +DD ++ Y G
Sbjct: 122 PRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSL-----YVAGPDIYKMDVKTG--- 173
Query: 273 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 332
K L + + L + + + + F +
Sbjct: 174 KYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSML---------YTIARFKDDKQDPA 224
Query: 333 AHNQDVNCVAWNPVVPEPQKTNLTLHD 359
+ ++ + +
Sbjct: 225 TADLLYGYLSVDLKTGKTHTQEFADLT 251
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 51.7 bits (122), Expect = 9e-08
Identities = 20/252 (7%), Positives = 54/252 (21%), Gaps = 11/252 (4%)
Query: 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQ 60
S +++ + +P G + + V++ P ++ +
Sbjct: 78 ANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKP 137
Query: 61 LVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR 120
+ R ++ + + D
Sbjct: 138 VRTFPMPR--QVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVL 195
Query: 121 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ 180
+ + + Q AT ++ + +
Sbjct: 196 YFWPHQSPR-HEFSMLYTIARFKDDKQDPATADLLYGYLSVDL--KTGKTHTQEFADLTE 252
Query: 181 DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240
P D + K + + N T + +AFD+ G +L
Sbjct: 253 LYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAAN------LDHTYYCVAFDKKGDKL 306
Query: 241 ATCSDDATVKIW 252
+ ++
Sbjct: 307 YLGGTFNDLAVF 318
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 44.7 bits (104), Expect = 1e-05
Identities = 11/155 (7%), Positives = 36/155 (23%), Gaps = 5/155 (3%)
Query: 140 VTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASAS 198
+++ + ++ V +V + Y+ + P + +
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVM--PDKFGPGTAMMAPDNRTAYVLNN 59
Query: 199 YDDTVKLF--KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 256
+ + K + +++S A G + +
Sbjct: 60 HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVV 119
Query: 257 PGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW 291
+ + + K V T + +
Sbjct: 120 KPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAAD 154
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 51.4 bits (121), Expect = 8e-08
Identities = 37/313 (11%), Positives = 77/313 (24%), Gaps = 53/313 (16%)
Query: 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVE 63
++ H + +P G +S N+R+W K
Sbjct: 51 TEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTT------------- 97
Query: 64 DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 123
+++ +W IA+
Sbjct: 98 ----------------------IPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT 135
Query: 124 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVK 183
N L G + SV + + F D + G +++ +
Sbjct: 136 GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSV 195
Query: 184 KVRFHPFDNILASASYDDTVKLFKEDKAEA-DWINFATLKSHTSTVWSLAFDRIGSRLAT 242
+ + + + +H+ +V+ L + G+++A+
Sbjct: 196 RYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIAS 255
Query: 243 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302
S D T+KIW N + K T+ + + +
Sbjct: 256 ASADKTIKIW---------------NVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSIS 300
Query: 303 GDDAIRIFKENPE 315
+ I NPE
Sbjct: 301 ANGFINFV--NPE 311
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 45.7 bits (106), Expect = 6e-06
Identities = 10/75 (13%), Positives = 23/75 (30%), Gaps = 3/75 (4%)
Query: 97 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 156
+P G+ I + + S H ++ S +G + A+
Sbjct: 24 GNTPAGDKIQYCN-GTSVYTVPVGSL--TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHG 80
Query: 157 SVWVWEVGEEDEYEC 171
+V +W+ +
Sbjct: 81 NVRIWDTTQTTHILK 95
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 39.9 bits (91), Expect = 5e-04
Identities = 11/112 (9%), Positives = 23/112 (20%), Gaps = 5/112 (4%)
Query: 182 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 241
+ P + + + +V + H+ G A
Sbjct: 20 AVVLGNTPAGDKIQYCN-GTSVYTVPVGSLT----DTEIYTEHSHQTTVAKTSPSGYYCA 74
Query: 242 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 293
+ V+IW + + P K + S
Sbjct: 75 SGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRER 126
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 49.1 bits (115), Expect = 6e-07
Identities = 37/324 (11%), Positives = 82/324 (25%), Gaps = 37/324 (11%)
Query: 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKL-----HGLPVETSLR----- 59
+ ++S++P I+ + + HG V T+++
Sbjct: 16 QRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIK 75
Query: 60 --QLV----EDKNIRLWGKESFGNKFTAKAILS---DGHQRTIRETAWSPCGNFIASASF 110
Q + E + +WG + + + I + +W G +
Sbjct: 76 GSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGE 135
Query: 111 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF-LATCSRDKSVWVWEVGEEDEY 169
+ GH + + ++ T D SV ++
Sbjct: 136 GRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFS 195
Query: 170 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW 229
+ V+ V F P D + K+ +
Sbjct: 196 ASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGI 255
Query: 230 SLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGRTIYD 288
+ AT DAT+++W + + KCV +
Sbjct: 256 FALSWLDSQKFATVGADATIRVW---------------DVTTSKCVQKWTLDKQQLGNQQ 300
Query: 289 ISWCHLTD-LIATACGDDAIRIFK 311
+ + I + D + ++
Sbjct: 301 VGVVATGNGRIISLSLDGTLNFYE 324
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.4 bits (113), Expect = 1e-06
Identities = 16/124 (12%), Positives = 39/124 (31%), Gaps = 14/124 (11%)
Query: 223 SHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH 281
+ + L++D + +A A V+ D DS V +GH
Sbjct: 15 TQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLD-------------DGDSKVPPVVQFTGH 61
Query: 282 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV 341
+ + + + GD++ ++ V +E + ++ +
Sbjct: 62 GSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDI 121
Query: 342 AWNP 345
+W+
Sbjct: 122 SWDF 125
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 46.1 bits (107), Expect = 5e-06
Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 1/76 (1%)
Query: 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ- 147
+ A+ DAT VWD + + TL+ + + V G
Sbjct: 250 PVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNG 309
Query: 148 FLATCSRDKSVWVWEV 163
+ + S D ++ +E+
Sbjct: 310 RIISLSLDGTLNFYEL 325
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.1 bits (94), Expect = 2e-04
Identities = 22/213 (10%), Positives = 56/213 (26%), Gaps = 13/213 (6%)
Query: 8 KGHQGRVWNVSWNPQGT--MISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDK 65
+ G + ++SW+ +G + G D ++ G + L + +
Sbjct: 112 QVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSR 171
Query: 66 NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE 125
+R G+ + + + + +
Sbjct: 172 PMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKIS 231
Query: 126 C-----------NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAV 174
C + + Q AT D ++ VW+V + +
Sbjct: 232 CFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTL 291
Query: 175 INAHIQDVKKVRFHPFDNILASASYDDTVKLFK 207
+ + + + + S S D T+ ++
Sbjct: 292 DKQQLGNQQVGVVATGNGRIISLSLDGTLNFYE 324
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Score = 44.0 bits (103), Expect = 3e-05
Identities = 21/200 (10%), Positives = 48/200 (24%), Gaps = 31/200 (15%)
Query: 104 FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163
F + A+ D + E L+ V S +G++L RD V + ++
Sbjct: 34 FSVTLRDAGQIALIDGSTY--EIKTVLDTGYA-VHISRLSASGRYLFVIGRDGKVNMIDL 90
Query: 164 --GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD---------TVKLFKEDKAE 212
E + + D + +Y T++ K
Sbjct: 91 WMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTR 150
Query: 213 ADWINFATLKSHTSTVWSLAFDRIGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSV 271
+ V ++ + + + + +
Sbjct: 151 GMTYDEQEY-HPEPRVAAILASHYRPEFIVNVKETGKILLV---------------DYTD 194
Query: 272 WKCVCTLSGHHGRTIYDISW 291
+ T R ++D
Sbjct: 195 LNNLKTTEISAERFLHDGGL 214
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Score = 40.9 bits (95), Expect = 3e-04
Identities = 22/175 (12%), Positives = 48/175 (27%), Gaps = 16/175 (9%)
Query: 97 AWSPCGNFIASASFDATTAVWDKRSGQFECNATL---EGHENEVKSVTWSKNGQFL-ATC 152
S G ++ D + D + A + + S ++ A
Sbjct: 68 RLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGA 127
Query: 153 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILA-SASYDDTVKLF--KED 209
+ + + E + + + +HP + A AS+ + KE
Sbjct: 128 YWPPQYVIMDG---ETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKET 184
Query: 210 K--AEADWINFATLKSHTSTV----WSLAFDRIGSRLATCSDDATVKIWKEYKPG 258
D+ + LK+ + D T ++ + + K G
Sbjct: 185 GKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEG 239
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 42.9 bits (99), Expect = 6e-05
Identities = 13/138 (9%), Positives = 30/138 (21%), Gaps = 5/138 (3%)
Query: 10 HQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRL 69
+ + + E + + V R
Sbjct: 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRA 255
Query: 70 WGKESFGNKF---TAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFEC 126
+G + F +I + S G+ + A +D + E
Sbjct: 256 FGAYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL--EK 313
Query: 127 NATLEGHENEVKSVTWSK 144
++ N S+ +
Sbjct: 314 KGQVDLPGNASMSLASVR 331
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 41.7 bits (96), Expect = 1e-04
Identities = 19/284 (6%), Positives = 60/284 (21%), Gaps = 32/284 (11%)
Query: 1 MINSQTLKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLW---------------VMVIRE 44
+ T+ P G ++ + +++ +
Sbjct: 23 VDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVK 82
Query: 45 PYEKLHGLPVETSLRQLVEDKNIRLW------GKESFGNKFTAKAILSDGHQRTIRETAW 98
P +L + L + + + T + R I AW
Sbjct: 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAW 142
Query: 99 SPCGNFIASASFDATTAVWDKRS--GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 156
+ G+ + D + + + + + + +
Sbjct: 143 ARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPF 202
Query: 157 SVWVWEVG---EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA 213
++ ++ ++ D S + +
Sbjct: 203 YTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVL 262
Query: 214 DWINFATLKS-----HTSTVWSLAFDRIGSRLATCSDDATVKIW 252
+ + S + +S+ GS + + +
Sbjct: 263 ESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAY 306
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 41.7 bits (96), Expect = 1e-04
Identities = 18/172 (10%), Positives = 37/172 (21%), Gaps = 32/172 (18%)
Query: 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTW 142
+ + I A+S + ++ D SG + +E ++ W
Sbjct: 187 EVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGW 246
Query: 143 SKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT 202
G R + +
Sbjct: 247 RPGGWQQVAYHRALDRIYL-------------------------LVDQRDEWRHKTASRF 281
Query: 203 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL--ATCSDDATVKIW 252
V + A + + S+ + L A + D T+ I
Sbjct: 282 VVVLDA----KTGERLAKFE-MGHEIDSINVSQDEKPLLYALSTGDKTLYIH 328
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 38.2 bits (87), Expect = 0.002
Identities = 14/79 (17%), Positives = 31/79 (39%), Gaps = 5/79 (6%)
Query: 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG 146
H+ R + + V D ++G E A E +E+ S+ S++
Sbjct: 255 AYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG--ERLAKFE-MGHEIDSINVSQDE 311
Query: 147 Q--FLATCSRDKSVWVWEV 163
+ A + DK++++ +
Sbjct: 312 KPLLYALSTGDKTLYIHDA 330
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 38.8 bits (89), Expect = 0.001
Identities = 24/217 (11%), Positives = 57/217 (26%), Gaps = 12/217 (5%)
Query: 97 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLE---GHENEVKSVTWSKNGQFLATCS 153
S G ++ DA + D + + A ++ + S ++ +
Sbjct: 68 RMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGA 127
Query: 154 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA 213
+ GE E + D + P + ++ + ++ +
Sbjct: 128 YWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKV 187
Query: 214 DWINFA-------TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTP 266
+N+ T + +D T ++++ + K
Sbjct: 188 LLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRL--SALV 245
Query: 267 DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 303
D + H + S HL D + G
Sbjct: 246 DVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIG 282
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 37.7 bits (86), Expect = 0.003
Identities = 31/261 (11%), Positives = 53/261 (20%), Gaps = 21/261 (8%)
Query: 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTW 142
A SDG A S + A F TT W +G G +
Sbjct: 15 AAASDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSL--AVA 72
Query: 143 SKNGQFLA----------TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK----VRFH 188
+G A R V V++ + +A V +
Sbjct: 73 GHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNC 132
Query: 189 PFDNILASASYDD-TVKLFK-EDKAEADWINFAT--LKSHTSTVWSLAFDRIGSRLATCS 244
L + ++ A+ + S A+
Sbjct: 133 ASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDL 192
Query: 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 304
A A + + I + A
Sbjct: 193 AAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASS-ILQGDIPAAGATMKAAIDG 251
Query: 305 DAIRIFKENPEAGDSDMVSFD 325
+ +N + MV+
Sbjct: 252 NESGRKADNFRSAGFQMVAKL 272
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 479 | |||
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 100.0 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 100.0 | |
| d2gx8a1 | 370 | Nif3-related protein BC4286 {Bacillus cereus [TaxI | 100.0 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 100.0 | |
| d2fywa1 | 265 | Hypothetical protein SP1609 {Streptococcus pneumon | 100.0 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.98 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.97 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.97 | |
| d1nmpa_ | 247 | Hypothetical protein YbgI {Escherichia coli [TaxId | 99.97 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.96 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.95 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.95 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.95 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.94 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.93 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.91 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.89 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.89 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.89 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.87 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.86 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.85 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.82 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.82 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.78 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.78 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.76 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.73 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.72 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.63 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.56 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.54 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.53 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.52 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.37 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.36 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.3 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 99.28 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 99.23 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 99.21 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 99.18 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 99.13 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 99.12 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 99.11 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 99.08 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 99.04 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 99.03 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 99.02 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.96 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.93 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.75 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.72 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.7 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.66 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.52 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 98.3 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 98.17 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 98.07 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 97.84 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 97.8 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 97.71 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 97.38 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 96.98 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 96.86 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 96.73 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 96.67 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 96.57 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 96.27 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 95.85 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 95.69 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 95.59 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 95.58 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 95.51 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 95.45 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 94.3 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 93.91 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 93.67 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 93.46 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 93.46 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 93.34 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 93.18 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 92.67 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 92.49 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 91.72 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 91.43 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 89.57 | |
| d2hu7a1 | 313 | Acylamino-acid-releasing enzyme, N-terminal donain | 88.73 |
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-41 Score=314.55 Aligned_cols=281 Identities=15% Similarity=0.209 Sum_probs=238.7
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
+++| +|...|+|++|+|+|++|+||+ ||.|+|||+.++.....+ ..
T Consensus 45 ~~~~-~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~--------------------------------~~ 90 (337)
T d1gxra_ 45 INTL-NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPV--------------------------------SQ 90 (337)
T ss_dssp EEEE-CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCS--------------------------------EE
T ss_pred EEEC-CCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCccccee--------------------------------EE
Confidence 3445 7999999999999999999997 899999999765543221 11
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~ 163 (479)
....+|.+.|.+++|+|++++|++|+.||.|++||+...+......+..|...+.++.|+|++.++++++.|+.|++|++
T Consensus 91 ~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~ 170 (337)
T d1gxra_ 91 LDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL 170 (337)
T ss_dssp EECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eeecCCCCcEEEEEEcCCCCEEEEeecccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 22357899999999999999999999999999999987766677788899999999999999999999999999999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
++. ........|...+++++|+++++.+++++.|+.|++||+++++. +.. ..|...|.+++|+|++++|+++
T Consensus 171 ~~~---~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~----~~~-~~~~~~i~~l~~~~~~~~l~~~ 242 (337)
T d1gxra_ 171 HNQ---TLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ----LQQ-HDFTSQIFSLGYCPTGEWLAVG 242 (337)
T ss_dssp TTT---EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE----EEE-EECSSCEEEEEECTTSSEEEEE
T ss_pred ccc---ccccccccccccccccccccccccccccccccccccccccccee----ecc-cccccceEEEEEccccccccee
Confidence 987 55667778899999999999999999999999999999987653 333 3478899999999999999999
Q ss_pred eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCcee
Q psy14815 244 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVS 323 (479)
Q Consensus 244 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 323 (479)
+.|+.+++||++... ......| ...|++++|+|++++|++++.||.|++||+.+++
T Consensus 243 ~~d~~i~i~d~~~~~----------------~~~~~~~-~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~------- 298 (337)
T d1gxra_ 243 MESSNVEVLHVNKPD----------------KYQLHLH-ESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA------- 298 (337)
T ss_dssp ETTSCEEEEETTSSC----------------EEEECCC-SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC-------
T ss_pred ccccccccccccccc----------------ccccccc-ccccceEEECCCCCEEEEEeCCCeEEEEECCCCC-------
Confidence 999999999985442 1233444 7899999999999999999999999999999887
Q ss_pred eEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 324 FDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 324 ~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
++.. ..|...|++++|+|++++|+.++
T Consensus 299 --~~~~--~~~~~~v~~~~~s~d~~~l~t~s 325 (337)
T d1gxra_ 299 --SIFQ--SKESSSVLSCDISVDDKYIVTGS 325 (337)
T ss_dssp --EEEE--EECSSCEEEEEECTTSCEEEEEE
T ss_pred --EEEE--ccCCCCEEEEEEeCCCCEEEEEe
Confidence 3433 35888999999999999997654
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2e-40 Score=304.37 Aligned_cols=280 Identities=26% Similarity=0.435 Sum_probs=249.5
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
+..+|+||+++|++++|+|++++|+||+.||+|+|||+.+++.+..+
T Consensus 9 ~~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~--------------------------------- 55 (317)
T d1vyhc1 9 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL--------------------------------- 55 (317)
T ss_dssp CSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEE---------------------------------
T ss_pred ccEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEE---------------------------------
Confidence 45689999999999999999999999999999999999888766554
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd 162 (479)
.+|...|.+++|+|++.++++++.++.+.+|+....+ ....+..|...+.++.|+++++.+++++.|+.+++||
T Consensus 56 ----~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 129 (317)
T d1vyhc1 56 ----KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE--CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWE 129 (317)
T ss_dssp ----CCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC--EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred ----eCCCCcEEEEeeecccccccccccccccccccccccc--cccccccccccceeeeccCCCceEEeeccCcceeEee
Confidence 4688999999999999999999999999999998876 5566778999999999999999999999999999999
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCC-----
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG----- 237 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----- 237 (479)
++++ .....+..|...+.+++|+|++++|++++.|+.|++|+..+... ...+..|...+.++.|+|++
T Consensus 130 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~ 202 (317)
T d1vyhc1 130 VQTG---YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC----KAELREHRHVVECISWAPESSYSSI 202 (317)
T ss_dssp TTTC---CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEECCSCGGGGG
T ss_pred cccc---eeeeEEccCCCcceeeecccCCCEEEEEeCCCeEEEEeecccee----eEEEecCCCCceEEEEeecccccee
Confidence 9987 55667788999999999999999999999999999999997654 67778899999999998753
Q ss_pred ---------------CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe
Q psy14815 238 ---------------SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 302 (479)
Q Consensus 238 ---------------~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~ 302 (479)
.++++++.|+.|++||+.. .+++.++.+| ...|.+++|+|++++|++|+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~---------------~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~ 266 (317)
T d1vyhc1 203 SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST---------------GMCLMTLVGH-DNWVRGVLFHSGGKFILSCA 266 (317)
T ss_dssp GGCCSCC-------CCEEEEEETTSEEEEEETTT---------------TEEEEEEECC-SSCEEEEEECSSSSCEEEEE
T ss_pred eccccceeeeeccCCceeEeccCCCEEEEEECCC---------------CcEEEEEeCC-CCCEEEEEECCCCCEEEEEE
Confidence 4689999999999999843 3678888887 78999999999999999999
Q ss_pred CCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 303 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 303 ~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.||.|++||+.+++ ....+.+|.++|++++|+|++++|++++
T Consensus 267 ~dg~i~iwd~~~~~----------~~~~~~~h~~~V~~~~~s~~~~~l~s~s 308 (317)
T d1vyhc1 267 DDKTLRVWDYKNKR----------CMKTLNAHEHFVTSLDFHKTAPYVVTGS 308 (317)
T ss_dssp TTTEEEEECCTTSC----------CCEEEECCSSCEEEEEECSSSSCEEEEE
T ss_pred CCCeEEEEECCCCc----------EEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 99999999999887 3344568999999999999999997764
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2e-39 Score=307.82 Aligned_cols=307 Identities=20% Similarity=0.313 Sum_probs=230.5
Q ss_pred cccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecc
Q psy14815 8 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSD 87 (479)
Q Consensus 8 ~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~ 87 (479)
.+|++.|+|++|+|||++|++|+ |++|+|||+.+++.+..+..+..... ...........
T Consensus 59 ~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~ 118 (388)
T d1erja_ 59 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANK-------------------DPENLNTSSSP 118 (388)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC------------------------------------
T ss_pred CCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccc-------------------ccccccccccc
Confidence 36999999999999999999987 89999999999888776643321100 00011112235
Q ss_pred ccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCC
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 167 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~ 167 (479)
.|...|++++|+|++++|++|+.||.|++||...++ ....+.+|...|.++.|++++..+++++.++.+++||.++.
T Consensus 119 ~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~- 195 (388)
T d1erja_ 119 SSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRK--IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG- 195 (388)
T ss_dssp CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT-
T ss_pred CCCCCEEEEEECCCCCcceecccccccccccccccc--cccccccccccccccccccccccccccccceeeeeeecccc-
Confidence 788999999999999999999999999999999986 66778899999999999999999999999999999999886
Q ss_pred ceeeeeeeeccccceeEEEEec-CCCEEEEEEcCCcEEEEecCCcccceEe---eeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 168 EYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWIN---FATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
........+.. ..++.+.+ ++++|++|+.||.|++||.+++...... .....+|...|.+++|+|++++|+++
T Consensus 196 --~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~ 272 (388)
T d1erja_ 196 --QCSLTLSIEDG-VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 272 (388)
T ss_dssp --EEEEEEECSSC-EEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEE
T ss_pred --ccccccccccc-cccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEE
Confidence 33444444444 44555554 8899999999999999999876642211 12335688999999999999999999
Q ss_pred eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCcee
Q psy14815 244 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVS 323 (479)
Q Consensus 244 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 323 (479)
+.||.|++||++........... ....+......| ...|.+++|+|++++|++|+.||.|++||+.+++
T Consensus 273 ~~d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~------- 341 (388)
T d1erja_ 273 SLDRSVKLWNLQNANNKSDSKTP---NSGTCEVTYIGH-KDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN------- 341 (388)
T ss_dssp ETTSEEEEEEC------------------CEEEEEECC-SSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC-------
T ss_pred ECCCcEEEEeccCCccccccccc---cccceeeecccc-cceEEEEEECCCCCEEEEEeCCCEEEEEECCCCc-------
Confidence 99999999999766544332221 223445555565 7899999999999999999999999999999987
Q ss_pred eEEEeccccccccceeEEEe------cCCCCCCCccc
Q psy14815 324 FDLVHTEHRAHNQDVNCVAW------NPVVPEPQKTN 354 (479)
Q Consensus 324 ~~~~~~~~~~h~~~v~~~~~------sp~~~~l~~~~ 354 (479)
....+.+|.+.|+++++ +|++++|++++
T Consensus 342 ---~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s 375 (388)
T d1erja_ 342 ---PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGS 375 (388)
T ss_dssp ---EEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEE
T ss_pred ---EEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEe
Confidence 33445789999999875 56777776553
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=6.3e-38 Score=291.19 Aligned_cols=285 Identities=21% Similarity=0.343 Sum_probs=240.7
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC----------CccceEEEeecCCcEEEec
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL----------PVETSLRQLVEDKNIRLWG 71 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~~i~~w~ 71 (479)
...++|+||++.|++++|+|++++|+||+.||+|+|||+.+++.+..+..+ +.+..+++++.++.+.+|+
T Consensus 46 ~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~ 125 (340)
T d1tbga_ 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred eeeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeeccc
Confidence 467889999999999999999999999999999999999998887766543 5667888899999999999
Q ss_pred CCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEE
Q psy14815 72 KESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT 151 (479)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~ 151 (479)
............ ...+|.......... .+..+.....+.....+...... .......+...+....+.+.+.++++
T Consensus 126 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (340)
T d1tbga_ 126 LKTREGNVRVSR-ELAGHTGYLSCCRFL-DDNQIVTSSGDTTCALWDIETGQ--QTTTFTGHTGDVMSLSLAPDTRLFVS 201 (340)
T ss_dssp SSSSCSCCCEEE-EECCCSSCEEEEEEE-ETTEEEEEETTTEEEEEETTTTE--EEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ccccccccccce-ecccccccccccccc-ccccccccccccccccccccccc--ccccccccceeEeeeccccccceeEE
Confidence 876444333322 235666666665554 45678888889999999988775 44556667788999999999999999
Q ss_pred EeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEE
Q psy14815 152 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSL 231 (479)
Q Consensus 152 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~ 231 (479)
|+.|+.|++||+++. .....+..|...|++++|+|++++|++|+.||.|++||++.... ........+...|.++
T Consensus 202 ~~~d~~v~i~d~~~~---~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~--~~~~~~~~~~~~i~~~ 276 (340)
T d1tbga_ 202 GACDASAKLWDVREG---MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE--LMTYSHDNIICGITSV 276 (340)
T ss_dssp EETTTEEEEEETTTT---EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE--EEEECCTTCCSCEEEE
T ss_pred eecCceEEEEECCCC---cEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeeccccc--ccccccccccCceEEE
Confidence 999999999999987 66777889999999999999999999999999999999987653 2233445677889999
Q ss_pred EEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcc
Q psy14815 232 AFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 232 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~ 311 (479)
+|+|++++|++|+.||.|++||+.. ++++.++.+| ..+|++++|+|++++|++|+.||.|++||
T Consensus 277 ~~s~~~~~l~~g~~dg~i~iwd~~~---------------~~~~~~~~~H-~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 277 SFSKSGRLLLAGYDDFNCNVWDALK---------------ADRAGVLAGH-DNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EECSSSCEEEEEETTSCEEEEETTT---------------CCEEEEECCC-SSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EECCCCCEEEEEECCCEEEEEECCC---------------CcEEEEEcCC-CCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence 9999999999999999999999843 3567888887 78999999999999999999999999997
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=9.1e-39 Score=293.60 Aligned_cols=256 Identities=18% Similarity=0.266 Sum_probs=212.4
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
..+.|.+|.+.|++++|+|+|++|++|+.||+|+|||+.+++....
T Consensus 50 ~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~---------------------------------- 95 (311)
T d1nr0a1 50 DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILK---------------------------------- 95 (311)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEE----------------------------------
T ss_pred eeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeeccccccc----------------------------------
Confidence 4667889999999999999999999999999999999876554321
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECC--CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCE-EEEEeCCCcEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFD--ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF-LATCSRDKSVW 159 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~-l~~~~~dg~i~ 159 (479)
.....|..+|.+++|+|+++++++++.+ ..+++|++++++ ....+.+|...|.+++|+|++++ |++|+.||.|+
T Consensus 96 -~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~--~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~ 172 (311)
T d1nr0a1 96 -TTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT--SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVA 172 (311)
T ss_dssp -EEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCC--BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEE
T ss_pred -cccccccCcccccccccccccccccccccccccccccccccc--ccccccccccccccccccccceeeecccccccccc
Confidence 1125788999999999999999999864 569999999886 56678899999999999998875 88899999999
Q ss_pred EEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEe---eeeecCCCccEEEEEEccC
Q psy14815 160 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN---FATLKSHTSTVWSLAFDRI 236 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~ 236 (479)
+||+++. +....+..|..+|+++.|+|+++++++++.|+.|++||.+.+...... .....+|...|++++|+|+
T Consensus 173 i~d~~~~---~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~ 249 (311)
T d1nr0a1 173 IFEGPPF---KFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD 249 (311)
T ss_dssp EEETTTB---EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTT
T ss_pred ccccccc---ccccccccccccccccccCccccccccccccccccccccccccccccccccccccccccccccccccCCC
Confidence 9999987 666778889999999999999999999999999999999876532111 1123468899999999999
Q ss_pred CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccC
Q psy14815 237 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 313 (479)
Q Consensus 237 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~ 313 (479)
+++|++|+.||.|+|||+++ .+++.++..+.......+.+.+++++|++++.||.|++||.+
T Consensus 250 ~~~l~tgs~Dg~v~iwd~~t---------------~~~~~~l~~~~~~~~~~~~~~~~~~~l~s~s~dG~i~~wd~d 311 (311)
T d1nr0a1 250 GTKIASASADKTIKIWNVAT---------------LKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPE 311 (311)
T ss_dssp SSEEEEEETTSEEEEEETTT---------------TEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETT
T ss_pred CCEEEEEeCCCeEEEEECCC---------------CcEEEEEECCCCccceEEEEEecCCEEEEEECCCEEEEEeCC
Confidence 99999999999999999843 366777876644333334444456689999999999999974
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=2.5e-38 Score=290.66 Aligned_cols=254 Identities=19% Similarity=0.301 Sum_probs=212.6
Q ss_pred ccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
.+.+.+.+++++|+|+.|+.++ ++.|.+||+.++.....+ .+
T Consensus 15 ~~r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~~~~~~~-------------------------------------~~ 56 (311)
T d1nr0a1 15 TARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIY-------------------------------------TE 56 (311)
T ss_dssp CCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEE-------------------------------------CC
T ss_pred CCCCCeEEEEEcCCCCEEEEEe-CCEEEEEECCCCceeEEE-------------------------------------cC
Confidence 3556677899999999999986 567999998766554333 57
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC--CCcEEEEEeCCC
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEE 166 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--dg~i~vwd~~~~ 166 (479)
|...|++++|+|+|++|++|+.||+|++||+.+++......+..|..+|.+++|+|++++|++++. +..+++|++++.
T Consensus 57 H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~ 136 (311)
T d1nr0a1 57 HSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTG 136 (311)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTC
T ss_pred CCCCEEEEEEeCCCCeEeccccCceEeeeeeeccccccccccccccCccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999998875556678899999999999999999999986 456999999887
Q ss_pred CceeeeeeeeccccceeEEEEecCCCE-EEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeC
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNI-LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 245 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 245 (479)
+....+.+|...|++++|+|++++ |++|+.||.|++||+++.+ ....+..|...|+++.|+|+++++++++.
T Consensus 137 ---~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~----~~~~~~~~~~~i~~v~~~p~~~~l~~~~~ 209 (311)
T d1nr0a1 137 ---TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK----FKSTFGEHTKFVHSVRYNPDGSLFASTGG 209 (311)
T ss_dssp ---CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE----EEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred ---cccccccccccccccccccccceeeecccccccccccccccccc----cccccccccccccccccCccccccccccc
Confidence 455677889999999999998875 8889999999999999655 46778889999999999999999999999
Q ss_pred CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 246 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 246 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
|+.|++||.........+.... ....+| ...|++++|+|++++|++|+.||.|+|||+++++
T Consensus 210 d~~v~~~d~~~~~~~~~~~~~~--------~~~~~h-~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~ 271 (311)
T d1nr0a1 210 DGTIVLYNGVDGTKTGVFEDDS--------LKNVAH-SGSVFGLTWSPDGTKIASASADKTIKIWNVATLK 271 (311)
T ss_dssp TSCEEEEETTTCCEEEECBCTT--------SSSCSS-SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred cccccccccccccccccccccc--------cccccc-cccccccccCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 9999999986543221111000 011233 7789999999999999999999999999999886
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=3.3e-38 Score=288.44 Aligned_cols=285 Identities=17% Similarity=0.206 Sum_probs=224.0
Q ss_pred ccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC-CC---------ccceEEEeecCCcEEEecC
Q psy14815 3 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG-LP---------VETSLRQLVEDKNIRLWGK 72 (479)
Q Consensus 3 ~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~-~~---------~~~~~~~~~~~~~i~~w~~ 72 (479)
..++++||+++|++++|+|++++|+||+.||+|++||+++++.+..+.. +. .+..+++.+.|+.+++|+.
T Consensus 4 ~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~~~~~~d~~v~~~~~ 83 (299)
T d1nr0a2 4 IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPA 83 (299)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECS
T ss_pred cceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccceeecccceeeEEEecc
Confidence 4689999999999999999999999999999999999999887766642 21 1235677788999999998
Q ss_pred CCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy14815 73 ESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 152 (479)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~ 152 (479)
...... ........+...+.+++|+|++.++++++ ++.+++|+.... .... ....+.+++|+|+++++++|
T Consensus 84 ~~~~~~--~~~~~~~~~~~~~~~~~~s~~g~~~~~~~-~~~i~~~~~~~~----~~~~--~~~~~~~~~~s~~~~~l~~g 154 (299)
T d1nr0a2 84 GGSGVD--SSKAVANKLSSQPLGLAVSADGDIAVAAC-YKHIAIYSHGKL----TEVP--ISYNSSCVALSNDKQFVAVG 154 (299)
T ss_dssp SSSSSC--TTSCCEEECSSCEEEEEECTTSSCEEEEE-SSEEEEEETTEE----EEEE--CSSCEEEEEECTTSCEEEEE
T ss_pred CCcccc--ccccccccccccccccccccccccccccc-cccccccccccc----cccc--cccccccccccccccccccc
Confidence 743211 11122346778899999999998877766 578999995432 1222 34568899999999999999
Q ss_pred eCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEE
Q psy14815 153 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLA 232 (479)
Q Consensus 153 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 232 (479)
+.||.|++||+++... .......|...|++++|+|++++|++++.|+.|++||+.++.. ......+..|...|++++
T Consensus 155 ~~dg~i~~~d~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~-~~~~~~~~~h~~~v~~l~ 231 (299)
T d1nr0a2 155 GQDSKVHVYKLSGASV--SEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFE-LAHTNSWTFHTAKVACVS 231 (299)
T ss_dssp ETTSEEEEEEEETTEE--EEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTE-ESCCCCCCCCSSCEEEEE
T ss_pred cccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccc
Confidence 9999999999987632 1223456888999999999999999999999999999986552 223455677999999999
Q ss_pred EccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 233 FDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 233 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
|+|++++|++|+.||.|++||++..... .......++...+.++.| +++++|++++.|++|++||+
T Consensus 232 ~s~~~~~l~sgs~dg~i~iwd~~~~~~~-------------~~~~~~~~~~~~v~~~~~-~~~~~l~s~s~D~~i~iWdl 297 (299)
T d1nr0a2 232 WSPDNVRLATGSLDNSVIVWNMNKPSDH-------------PIIIKGAHAMSSVNSVIW-LNETTIVSAGQDSNIKFWNV 297 (299)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTCTTSC-------------CEEETTSSTTSCEEEEEE-EETTEEEEEETTSCEEEEEC
T ss_pred ccccccceEEEcCCCEEEEEECCCCCcc-------------eEEEecCCCCCcEEEEEE-CCCCEEEEEeCCCEEEEEec
Confidence 9999999999999999999998765432 123334444667777765 55779999999999999997
Q ss_pred C
Q psy14815 313 N 313 (479)
Q Consensus 313 ~ 313 (479)
.
T Consensus 298 ~ 298 (299)
T d1nr0a2 298 P 298 (299)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=8e-38 Score=295.10 Aligned_cols=252 Identities=19% Similarity=0.281 Sum_probs=211.3
Q ss_pred ccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 11 QGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 11 ~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
.++|+|++|+|+|++||+|+.||.|+|||+++++... ...+.+|.
T Consensus 7 ~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~-----------------------------------~~~l~gH~ 51 (371)
T d1k8kc_ 7 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQ-----------------------------------VHELKEHN 51 (371)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEE-----------------------------------EEEEECCS
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEE-----------------------------------EEEecCCC
Confidence 4789999999999999999999999999986544211 11235899
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCcee
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 170 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 170 (479)
++|++++|+|++++|++|+.|++|++||+.+++......+..|...|.+++|+|+++.|++|+.|+.+++|++.......
T Consensus 52 ~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~ 131 (371)
T d1k8kc_ 52 GQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWW 131 (371)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEE
T ss_pred CCEEEEEECCCCCEEEEEECCCeEEEEeecccccccccccccccccccccccccccccceeecccCcceeeeeecccccc
Confidence 99999999999999999999999999999988877777788899999999999999999999999999999998765432
Q ss_pred -eeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccc--------------eEeeeeecCCCccEEEEEEcc
Q psy14815 171 -CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEAD--------------WINFATLKSHTSTVWSLAFDR 235 (479)
Q Consensus 171 -~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--------------~~~~~~~~~~~~~v~~~~~~~ 235 (479)
.......|...|.+++|+|++++|++|+.|+.|++||....... .........|...|.+++|+|
T Consensus 132 ~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 211 (371)
T d1k8kc_ 132 VCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA 211 (371)
T ss_dssp EEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS
T ss_pred cccccccccccccccccccccccceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeec
Confidence 23445678889999999999999999999999999998653311 123456678999999999999
Q ss_pred CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCC
Q psy14815 236 IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 314 (479)
Q Consensus 236 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~ 314 (479)
++++|++++.|+.|++||+... .++..+..| ..+|.+++|+|++++|++|+ |+.+++|..+.
T Consensus 212 ~g~~l~s~~~d~~i~iwd~~~~---------------~~~~~~~~~-~~~v~s~~fs~d~~~la~g~-d~~~~~~~~~~ 273 (371)
T d1k8kc_ 212 NGSRVAWVSHDSTVCLADADKK---------------MAVATLASE-TLPLLAVTFITESSLVAAGH-DCFPVLFTYDS 273 (371)
T ss_dssp SSSEEEEEETTTEEEEEEGGGT---------------TEEEEEECS-SCCEEEEEEEETTEEEEEET-TSSCEEEEEET
T ss_pred ccccccccccCCcceEEeeecc---------------cceeeeecc-cccceeeeecCCCCEEEEEc-CCceEEEEeeC
Confidence 9999999999999999998543 446777776 78999999999998887655 77777766543
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.3e-36 Score=277.75 Aligned_cols=244 Identities=18% Similarity=0.275 Sum_probs=210.0
Q ss_pred cccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 6 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 6 ~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
...+|.+.|++++|+|++++|++|+.||+|++||+...... ....
T Consensus 92 ~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~~-----------------------------------~~~~ 136 (337)
T d1gxra_ 92 DCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPR-----------------------------------IKAE 136 (337)
T ss_dssp ECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--E-----------------------------------EEEE
T ss_pred eecCCCCcEEEEEEcCCCCEEEEeecccccccccccccccc-----------------------------------cccc
Confidence 34589999999999999999999999999999997643321 1111
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCC
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~ 165 (479)
...|...+.+++|+|++.++++++.|+.|++|++.+++ .......|...|.+++|++++..+++++.|+.+++||+++
T Consensus 137 ~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~--~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~ 214 (337)
T d1gxra_ 137 LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT--LVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLRE 214 (337)
T ss_dssp EECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred cccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccc
Confidence 25788899999999999999999999999999999986 5667788999999999999999999999999999999998
Q ss_pred CCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeC
Q psy14815 166 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 245 (479)
Q Consensus 166 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 245 (479)
.+ .+..+ .|...|.+++|+|++++|++|+.|+.+++||+++... .....|...|++++|+|++++|++++.
T Consensus 215 ~~---~~~~~-~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~-----~~~~~~~~~i~~v~~s~~g~~l~s~s~ 285 (337)
T d1gxra_ 215 GR---QLQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-----YQLHLHESCVLSLKFAYCGKWFVSTGK 285 (337)
T ss_dssp TE---EEEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-----EEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred ce---eeccc-ccccceEEEEEcccccccceecccccccccccccccc-----ccccccccccceEEECCCCCEEEEEeC
Confidence 73 33333 4778899999999999999999999999999987663 356779999999999999999999999
Q ss_pred CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 246 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 246 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
||.|++||+... +++..+. | ...|.+++|+|++++|++|+.||+|+|||+
T Consensus 286 Dg~i~iwd~~~~---------------~~~~~~~-~-~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 286 DNLLNAWRTPYG---------------ASIFQSK-E-SSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp TSEEEEEETTTC---------------CEEEEEE-C-SSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CCeEEEEECCCC---------------CEEEEcc-C-CCCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 999999998543 3344443 3 678999999999999999999999999986
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3.4e-36 Score=283.84 Aligned_cols=253 Identities=16% Similarity=0.202 Sum_probs=213.0
Q ss_pred cCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc
Q psy14815 89 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 168 (479)
..++|+|++|+|++++||+|+.|+.|+|||+.+++...+..+++|.++|.+++|+|++++|++|+.|+.|++||+++..
T Consensus 6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~- 84 (371)
T d1k8kc_ 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT- 84 (371)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE-
T ss_pred CCCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccc-
Confidence 3578999999999999999999999999999998888888999999999999999999999999999999999998753
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCe
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 248 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~ 248 (479)
......+..|...|++++|+|+++.|++|+.|+.|++|++...............|...|.+++|+|++++|++|+.|+.
T Consensus 85 ~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~ 164 (371)
T d1k8kc_ 85 WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFK 164 (371)
T ss_dssp EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred cccccccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcE
Confidence 23445566788899999999999999999999999999998776544555667789999999999999999999999999
Q ss_pred EEEEeccCCCCCCCCCC---CCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeE
Q psy14815 249 VKIWKEYKPGNSAGIPT---PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFD 325 (479)
Q Consensus 249 i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~ 325 (479)
|++||............ ...............| ...|.+++|+|++++|++++.|+.|++||+..+.
T Consensus 165 v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~--------- 234 (371)
T d1k8kc_ 165 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS-CGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM--------- 234 (371)
T ss_dssp EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC-SSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT---------
T ss_pred EEEEeeccCccccccccccccccccceeeeeeccCc-cCcEEEEEeecccccccccccCCcceEEeeeccc---------
Confidence 99999865433221111 1111223455666665 7899999999999999999999999999999887
Q ss_pred EEeccccccccceeEEEecCCCCCCCcc
Q psy14815 326 LVHTEHRAHNQDVNCVAWNPVVPEPQKT 353 (479)
Q Consensus 326 ~~~~~~~~h~~~v~~~~~sp~~~~l~~~ 353 (479)
.......|..+|.+++|+|++++|+.+
T Consensus 235 -~~~~~~~~~~~v~s~~fs~d~~~la~g 261 (371)
T d1k8kc_ 235 -AVATLASETLPLLAVTFITESSLVAAG 261 (371)
T ss_dssp -EEEEEECSSCCEEEEEEEETTEEEEEE
T ss_pred -ceeeeecccccceeeeecCCCCEEEEE
Confidence 333346789999999999999988654
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.2e-34 Score=270.02 Aligned_cols=300 Identities=20% Similarity=0.310 Sum_probs=231.5
Q ss_pred cccccccccce-EEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCC---------ccceEEEeecCCcEEEecCC
Q psy14815 4 SQTLKGHQGRV-WNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLP---------VETSLRQLVEDKNIRLWGKE 73 (479)
Q Consensus 4 ~~~l~~h~~~V-~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~---------~~~~~~~~~~~~~i~~w~~~ 73 (479)
..+|+||.+.| +|++| ++++|+||+.||+|+|||+.+++.+..+..|. .+..+++++.|+.+++|+..
T Consensus 5 ~~tL~GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~~~l~s~s~D~~i~iw~~~ 82 (355)
T d1nexb2 5 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIK 82 (355)
T ss_dssp EEEEECCSSSCEEEEEE--ETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETTTEEEEEETTCCEEEEETT
T ss_pred cEEECCcCCCcEEEEEE--CCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCCCEEEEEeccccccccccc
Confidence 56899998885 66665 58899999999999999999999988887763 24578888999999999987
Q ss_pred CCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEE---------------------eEEEeC
Q psy14815 74 SFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFEC---------------------NATLEG 132 (479)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~---------------------~~~~~~ 132 (479)
.... ........+........+++++.++++++.|+.|++||+.+..... ......
T Consensus 83 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (355)
T d1nexb2 83 KGCC---THVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 159 (355)
T ss_dssp TTEE---EEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEEC
T ss_pred cccc---ccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeee
Confidence 4221 1122223445566777788999999999999999999998754211 111222
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcc
Q psy14815 133 HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 212 (479)
Q Consensus 133 ~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~ 212 (479)
|...+. .+.++++.++++..|+.+++||+++. +.......+...+.++.|+|+++.+++++.|+.|++||.+++.
T Consensus 160 ~~~~v~--~~~~~~~~~~~~~~d~~i~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~ 234 (355)
T d1nexb2 160 HMASVR--TVSGHGNIVVSGSYDNTLIVWDVAQM---KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE 234 (355)
T ss_dssp CSSCEE--EEEEETTEEEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCC
T ss_pred cccccc--ccccccceeeeecccceeeeeecccc---cceeeeeccccccccccccccceeeecccccceEEeeeccccc
Confidence 333333 34557889999999999999999887 5566677788889999999999999999999999999999765
Q ss_pred cceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEE-Ee
Q psy14815 213 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI-SW 291 (479)
Q Consensus 213 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l-~~ 291 (479)
. +..+.+|...|.+++++ +++|++++.||.|++||+.... ..+..|+. .+.++ .+
T Consensus 235 ~----~~~~~~h~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~-----------------~~~~~~~~-~~~~~~~~ 290 (355)
T d1nexb2 235 L----MYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYS-----------------RKFSYHHT-NLSAITTF 290 (355)
T ss_dssp E----EEEECCCSSCCCEEEEC--SSEEEEECTTSEEEEEETTTCC-----------------EEEEEECT-TCCCCCEE
T ss_pred c----ccccccccccccccccc--cceeeeeecccccccccccccc-----------------eecccccC-CceEEEEE
Confidence 4 67788999999999997 4699999999999999985432 23444433 44444 55
Q ss_pred cCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCC
Q psy14815 292 CHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347 (479)
Q Consensus 292 ~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~ 347 (479)
++++.++++| .||.|++||+++++ ++.....+|.++|++++|+|+.
T Consensus 291 ~~~~~~l~~g-~d~~i~vwd~~tg~---------~~~~~~~~~~~~V~~v~~~~~~ 336 (355)
T d1nexb2 291 YVSDNILVSG-SENQFNIYNLRSGK---------LVHANILKDADQIWSVNFKGKT 336 (355)
T ss_dssp EECSSEEEEE-ETTEEEEEETTTCC---------BCCSCTTTTCSEEEEEEEETTE
T ss_pred cCCCCEEEEE-eCCEEEEEECCCCC---------EEEEEecCCCCCEEEEEEcCCe
Confidence 6677766655 58999999999987 4555667899999999999874
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=5.8e-34 Score=269.81 Aligned_cols=251 Identities=27% Similarity=0.385 Sum_probs=203.3
Q ss_pred ccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 7 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
..+|...|++++|+|++++|++|+.||+|++||...++.+..+
T Consensus 117 ~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~------------------------------------- 159 (388)
T d1erja_ 117 SPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMIL------------------------------------- 159 (388)
T ss_dssp --CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-------------------------------------
T ss_pred ccCCCCCEEEEEECCCCCcceeccccccccccccccccccccc-------------------------------------
Confidence 3468889999999999999999999999999998766544332
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEEeCC
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~vwd~~~ 165 (479)
.+|...|.++++++++..+++++.++.+++||..+.. .......+.. ..++.+++ ++++|++|+.||.|++||.++
T Consensus 160 ~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~ 236 (388)
T d1erja_ 160 QGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ--CSLTLSIEDG-VTTVAVSPGDGKYIAAGSLDRAVRVWDSET 236 (388)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--EEEEEECSSC-EEEEEECSTTCCEEEEEETTSCEEEEETTT
T ss_pred ccccccccccccccccccccccccceeeeeeeccccc--cccccccccc-cccccccCCCCCeEEEEcCCCeEEEeeccc
Confidence 5789999999999999999999999999999999886 4445554444 44555554 889999999999999999998
Q ss_pred CCceeee----eeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccc--------eEeeeeecCCCccEEEEEE
Q psy14815 166 EDEYECA----AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEAD--------WINFATLKSHTSTVWSLAF 233 (479)
Q Consensus 166 ~~~~~~~----~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--------~~~~~~~~~~~~~v~~~~~ 233 (479)
....... .....|...|++++|+|++++|++|+.||.|++||++..... .........|...|.+++|
T Consensus 237 ~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 316 (388)
T d1erja_ 237 GFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVAT 316 (388)
T ss_dssp CCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEE
T ss_pred CccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEE
Confidence 7533222 223468889999999999999999999999999999865421 1234455678999999999
Q ss_pred ccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEe------cCCCCeEEEEeCCCeE
Q psy14815 234 DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW------CHLTDLIATACGDDAI 307 (479)
Q Consensus 234 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~------~~~~~~l~~~~~dg~i 307 (479)
+|++++|++|+.||.|++||++. ++++.++.+| ...|.++++ +|++++|++|+.||+|
T Consensus 317 s~~~~~l~sg~~dg~i~vwd~~~---------------~~~~~~l~~H-~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I 380 (388)
T d1erja_ 317 TQNDEYILSGSKDRGVLFWDKKS---------------GNPLLMLQGH-RNSVISVAVANGSSLGPEYNVFATGSGDCKA 380 (388)
T ss_dssp CGGGCEEEEEETTSEEEEEETTT---------------CCEEEEEECC-SSCEEEEEECSSCTTCTTCEEEEEEETTSEE
T ss_pred CCCCCEEEEEeCCCEEEEEECCC---------------CcEEEEEeCC-CCCEEEEEEecCcccCCCCCEEEEEeCCCEE
Confidence 99999999999999999999843 3668889997 788999875 6789999999999999
Q ss_pred EEcccC
Q psy14815 308 RIFKEN 313 (479)
Q Consensus 308 ~vw~~~ 313 (479)
+||+++
T Consensus 381 ~iW~~~ 386 (388)
T d1erja_ 381 RIWKYK 386 (388)
T ss_dssp EEEEEE
T ss_pred EEEeee
Confidence 999975
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=9e-34 Score=259.59 Aligned_cols=248 Identities=29% Similarity=0.545 Sum_probs=219.8
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
.+++++++|.+.|++++|+|++.++++++.++.+.+|+....+....
T Consensus 50 ~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------- 96 (317)
T d1vyhc1 50 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT--------------------------------- 96 (317)
T ss_dssp CCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEEC---------------------------------
T ss_pred CEEEEEeCCCCcEEEEeeecccccccccccccccccccccccccccc---------------------------------
Confidence 35678999999999999999999999999999999998765443322
Q ss_pred eEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14815 82 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vw 161 (479)
..+|...+.++.|+|+++.+++++.|+.+++||+++++ ....+..|...+.+++|++++.+|++++.|+.|++|
T Consensus 97 ----~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~ 170 (317)
T d1vyhc1 97 ----MHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY--CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 170 (317)
T ss_dssp ----CCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ----cccccccceeeeccCCCceEEeeccCcceeEeecccce--eeeEEccCCCcceeeecccCCCEEEEEeCCCeEEEE
Confidence 25688899999999999999999999999999999986 567788999999999999999999999999999999
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecCC--------------------CEEEEEEcCCcEEEEecCCcccceEeeeee
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPFD--------------------NILASASYDDTVKLFKEDKAEADWINFATL 221 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--------------------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 221 (479)
++... .....+..|...+.+++|+|++ .++++++.|+.|++||++++. ++..+
T Consensus 171 ~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~----~~~~~ 243 (317)
T d1vyhc1 171 VVATK---ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM----CLMTL 243 (317)
T ss_dssp ETTTC---CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE----EEEEE
T ss_pred eeccc---eeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCc----EEEEE
Confidence 99987 5566777888899999988753 478999999999999999765 47788
Q ss_pred cCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEE
Q psy14815 222 KSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA 301 (479)
Q Consensus 222 ~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~ 301 (479)
.+|...|.+++|+|++++|++|+.||.|++||+... +++.++.+| ..+|++++|+|++++|++|
T Consensus 244 ~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~---------------~~~~~~~~h-~~~V~~~~~s~~~~~l~s~ 307 (317)
T d1vyhc1 244 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK---------------RCMKTLNAH-EHFVTSLDFHKTAPYVVTG 307 (317)
T ss_dssp ECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTS---------------CCCEEEECC-SSCEEEEEECSSSSCEEEE
T ss_pred eCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCC---------------cEEEEEcCC-CCCEEEEEEcCCCCEEEEE
Confidence 899999999999999999999999999999998544 345778887 7899999999999999999
Q ss_pred eCCCeEEEcc
Q psy14815 302 CGDDAIRIFK 311 (479)
Q Consensus 302 ~~dg~i~vw~ 311 (479)
+.||+|++||
T Consensus 308 s~Dg~i~iWd 317 (317)
T d1vyhc1 308 SVDQTVKVWE 317 (317)
T ss_dssp ETTSEEEEEC
T ss_pred eCCCeEEEeC
Confidence 9999999997
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=9.4e-34 Score=261.89 Aligned_cols=259 Identities=15% Similarity=0.203 Sum_probs=203.8
Q ss_pred ccccccc-ccceEEEEECC--CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 4 SQTLKGH-QGRVWNVSWNP--QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 4 ~~~l~~h-~~~V~~l~~s~--~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
...+.+| ...|++++|+| ++++|++|+.||+|+|||+..++....+..
T Consensus 55 ~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~----------------------------- 105 (325)
T d1pgua1 55 VVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEV----------------------------- 105 (325)
T ss_dssp EEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEE-----------------------------
T ss_pred eEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeec-----------------------------
Confidence 4456777 46899999998 678999999999999999987665543311
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEEEEC--CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCE-EEEEeCCCc
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIASASF--DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF-LATCSRDKS 157 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~-l~~~~~dg~ 157 (479)
........|..+|.+++|+++++++++++. ++.+++|+..+++ .+..+.+|...|.+++|+|++.. +++++.|+.
T Consensus 106 ~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~ 183 (325)
T d1pgua1 106 NVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGN--SLGEVSGHSQRINACHLKQSRPMRSMTVGDDGS 183 (325)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCC--EEEECCSCSSCEEEEEECSSSSCEEEEEETTTE
T ss_pred ccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccc--cceeeeecccccccccccccccceEEEeecccc
Confidence 111112468889999999999999988765 6789999999886 67788899999999999998764 778999999
Q ss_pred EEEEEeCCCCceeeeeeeeccccceeEEEEecC-CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEc--
Q psy14815 158 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD-- 234 (479)
Q Consensus 158 i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~-- 234 (479)
+++||+...+..........|...|++++|+|+ +.+|++++.||.|++||+++++. +..+.+|...+.++.|+
T Consensus 184 v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~----~~~l~~~~~~v~~~~~s~~ 259 (325)
T d1pgua1 184 VVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEF----LKYIEDDQEPVQGGIFALS 259 (325)
T ss_dssp EEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCE----EEECCBTTBCCCSCEEEEE
T ss_pred cccccccccccceecccccCCCCccEEeeeccccceeccccccccceeeeeeccccc----cccccccccccccceeeee
Confidence 999999876544445556678888999999996 68999999999999999987653 67778888777666555
Q ss_pred -cCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccc-cccEEEEEecCC-CCeEEEEeCCCeEEEcc
Q psy14815 235 -RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-GRTIYDISWCHL-TDLIATACGDDAIRIFK 311 (479)
Q Consensus 235 -~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~l~~~~~-~~~l~~~~~dg~i~vw~ 311 (479)
|++++|++++.|+.|+|||++.. +++..+..+. ...+..+++.+. +.+|++++.||.|++||
T Consensus 260 ~~dg~~l~s~s~D~~i~iwd~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwd 324 (325)
T d1pgua1 260 WLDSQKFATVGADATIRVWDVTTS---------------KCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYE 324 (325)
T ss_dssp ESSSSEEEEEETTSEEEEEETTTT---------------EEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEE
T ss_pred ccCCCEEEEEeCCCeEEEEECCCC---------------CEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCEEEEEE
Confidence 68999999999999999998433 5666666542 223444444432 34789999999999998
Q ss_pred c
Q psy14815 312 E 312 (479)
Q Consensus 312 ~ 312 (479)
+
T Consensus 325 l 325 (325)
T d1pgua1 325 L 325 (325)
T ss_dssp T
T ss_pred C
Confidence 6
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3.9e-33 Score=258.58 Aligned_cols=239 Identities=18% Similarity=0.251 Sum_probs=200.6
Q ss_pred eccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeC
Q psy14815 85 LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 164 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~ 164 (479)
.+.+|.++|++++|+|++++|++|+.||+|+|||+.+++ .+..+..|...|.+++|+|++.++++|+.|+.+++|+..
T Consensus 50 tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~--~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~ 127 (340)
T d1tbga_ 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTN--KVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTE--EEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESS
T ss_pred EECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccce--eEEEEecccccEEeeEeeccceeeeeecccceeeccccc
Confidence 357999999999999999999999999999999999996 667888999999999999999999999999999999976
Q ss_pred CCCcee-ee-----------------------------------------eeeeccccceeEEEEecCCCEEEEEEcCCc
Q psy14815 165 EEDEYE-CA-----------------------------------------AVINAHIQDVKKVRFHPFDNILASASYDDT 202 (479)
Q Consensus 165 ~~~~~~-~~-----------------------------------------~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~ 202 (479)
...... .. .....+...+....+.+.+.++++|+.|+.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 207 (340)
T d1tbga_ 128 TREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDAS 207 (340)
T ss_dssp SSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTE
T ss_pred ccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecCce
Confidence 432110 00 011123344667778888899999999999
Q ss_pred EEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEe-cc
Q psy14815 203 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GH 281 (479)
Q Consensus 203 i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 281 (479)
|++||++++. .+..+.+|...|++++|+|++++|++|+.||.|++||++.. .....+. ..
T Consensus 208 v~i~d~~~~~----~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~---------------~~~~~~~~~~ 268 (340)
T d1tbga_ 208 AKLWDVREGM----CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD---------------QELMTYSHDN 268 (340)
T ss_dssp EEEEETTTTE----EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT---------------EEEEEECCTT
T ss_pred EEEEECCCCc----EEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeeccc---------------cccccccccc
Confidence 9999998765 47788899999999999999999999999999999998543 3333332 22
Q ss_pred ccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 282 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 282 ~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
+...|.+++|+|++++|++|+.||.|++||+.+++ ....+.+|.++|++++|+|++++|++++
T Consensus 269 ~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~----------~~~~~~~H~~~V~~l~~s~d~~~l~s~s 331 (340)
T d1tbga_ 269 IICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD----------RAGVLAGHDNRVSCLGVTDDGMAVATGS 331 (340)
T ss_dssp CCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCC----------EEEEECCCSSCEEEEEECTTSSCEEEEE
T ss_pred ccCceEEEEECCCCCEEEEEECCCEEEEEECCCCc----------EEEEEcCCCCCEEEEEEeCCCCEEEEEc
Confidence 36789999999999999999999999999999887 4444578999999999999999997765
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-32 Score=253.67 Aligned_cols=309 Identities=22% Similarity=0.342 Sum_probs=232.8
Q ss_pred CcccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCc--------cceEEEeecCCcEEEecC
Q psy14815 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPV--------ETSLRQLVEDKNIRLWGK 72 (479)
Q Consensus 1 ~~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~w~~ 72 (479)
+++.++|+||++.|.+ +++++|++|+|||.||+|+|||+.+++++..+..|.. +..+++++.|+.+++|+.
T Consensus 6 ~~~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~~l~s~s~D~~~~~~~~ 84 (342)
T d2ovrb2 6 LKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNA 84 (342)
T ss_dssp CCCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEET
T ss_pred CCcCEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCCccccceeccccccccc
Confidence 4678899999999865 4666799999999999999999999999888877632 356788899999999998
Q ss_pred CCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy14815 73 ESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 152 (479)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~ 152 (479)
..... ......+...+...... ...+..+..|+.+.+|+..+++ ....+..+..... ...+....++++
T Consensus 85 ~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~ 153 (342)
T d2ovrb2 85 ETGEC-----IHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQ--CLHVLMGHVAAVR--CVQYDGRRVVSG 153 (342)
T ss_dssp TTTEE-----EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCC--EEEEEECCSSCEE--EEEECSSCEEEE
T ss_pred ccccc-----eecccccceeEeeeecc--cccccccccceeEEEeeccccc--ceeeeecccccce--eeccccceeeee
Confidence 74221 11123445555555544 4678889999999999999886 3344444433333 344466789999
Q ss_pred eCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEE
Q psy14815 153 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLA 232 (479)
Q Consensus 153 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 232 (479)
+.|+.+++||.+.. .....+..|...+..+ .+++.++++|+.||.|++||++.... +..+..|...+.++.
T Consensus 154 ~~d~~i~~~d~~~~---~~~~~~~~~~~~~~~~--~~~~~~l~s~~~dg~i~~~d~~~~~~----~~~~~~~~~~v~~~~ 224 (342)
T d2ovrb2 154 AYDFMVKVWDPETE---TCLHTLQGHTNRVYSL--QFDGIHVVSGSLDTSIRVWDVETGNC----IHTLTGHQSLTSGME 224 (342)
T ss_dssp ETTSCEEEEEGGGT---EEEEEECCCSSCEEEE--EECSSEEEEEETTSCEEEEETTTCCE----EEEECCCCSCEEEEE
T ss_pred cCCCeEEEeecccc---eeeEEEcCcccccccc--cCCCCEEEEEeCCCeEEEeeccccee----eeEecccccceeEEe
Confidence 99999999999877 5566677777665554 45688999999999999999987653 677889999999888
Q ss_pred EccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc--ccccEEEEEecCCCCeEEEEeCCCeEEEc
Q psy14815 233 FDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH--HGRTIYDISWCHLTDLIATACGDDAIRIF 310 (479)
Q Consensus 233 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~~~~~~l~~~~~dg~i~vw 310 (479)
++ +++|++++.|+.|++||+... +....+..+ +...+.++.++ ++++++|+.||+|++|
T Consensus 225 ~~--~~~l~s~s~d~~i~iwd~~~~---------------~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~s~Dg~i~iw 285 (342)
T d2ovrb2 225 LK--DNILVSGNADSTVKIWDIKTG---------------QCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLW 285 (342)
T ss_dssp EE--TTEEEEEETTSCEEEEETTTC---------------CEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEE
T ss_pred cC--CCEEEEEcCCCEEEEEecccc---------------cccccccccceeeeceeecccC--CCeeEEEcCCCEEEEE
Confidence 76 469999999999999998544 223444433 35566666665 5699999999999999
Q ss_pred ccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 311 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
|+++++ ....+......+|.+.|++++|+|++.+|+.+.
T Consensus 286 d~~tg~-----~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~ 324 (342)
T d2ovrb2 286 DLKTGE-----FIRNLVTLESGGSGGVVWRIRASNTKLVCAVGS 324 (342)
T ss_dssp ETTTCC-----EEEEEEECTTGGGTCEEEEEEECSSEEEEEEEC
T ss_pred ECCCCC-----EEEEEecccCCCCCCCEEEEEECCCCCEEEEEe
Confidence 999887 111111222346888999999999999887764
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.4e-33 Score=261.12 Aligned_cols=305 Identities=11% Similarity=-0.004 Sum_probs=216.8
Q ss_pred CcccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCcee
Q psy14815 1 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 1 ~~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
|+.++.+++|++.|++|+|+|++++||+|+.||+|+|||+.++.....+
T Consensus 1 ~~~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~------------------------------- 49 (342)
T d1yfqa_ 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDL------------------------------- 49 (342)
T ss_dssp CEEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEE-------------------------------
T ss_pred CCeEEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEE-------------------------------
Confidence 6788999999999999999999999999999999999998765432211
Q ss_pred eeEEeccccCCcEEEEEECCC-CCEEEEEECCCeEEEEECCCCeEEEeEEEeC-CCCcEEEEEEcCCCCEEEEEeCCCcE
Q psy14815 81 AKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEG-HENEVKSVTWSKNGQFLATCSRDKSV 158 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~dg~i 158 (479)
....+|..+|.+++|+|+ +.+|++|+.||.|++|++..+.. ...... +........+.+++..+++++.++.+
T Consensus 50 ---~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (342)
T d1yfqa_ 50 ---LQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS--FQALTNNEANLGICRICKYGDDKLIAASWDGLI 124 (342)
T ss_dssp ---EEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS--EEECBSCCCCSCEEEEEEETTTEEEEEETTSEE
T ss_pred ---EEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeecccccc--ccccccccccccccccccccccccccccccccc
Confidence 112468999999999986 46899999999999999988763 233333 33344555666788899999999999
Q ss_pred EEEEeCCCCceee-eeeeec--cccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEc-
Q psy14815 159 WVWEVGEEDEYEC-AAVINA--HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD- 234 (479)
Q Consensus 159 ~vwd~~~~~~~~~-~~~~~~--~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~- 234 (479)
++||++....... ...... .........+.+.++.+++++.|+.|++||++........ .....+...+.+..+.
T Consensus 125 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 203 (342)
T d1yfqa_ 125 EVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGT-IEESGLKYQIRDVALLP 203 (342)
T ss_dssp EEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCE-EEECSCSSCEEEEEECS
T ss_pred ceeeccccccceeeecccccccccceeeeeeeeccCCceeeecCCCcEEEEecccCccccee-eeecccccceeeeEeec
Confidence 9999976432211 111222 2223456777888999999999999999999876643222 2233444555555554
Q ss_pred cCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCC
Q psy14815 235 RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 314 (479)
Q Consensus 235 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~ 314 (479)
.++..+++++.||.+.+|+........................... +...+++++|+|++++|++|+.||.|++||+++
T Consensus 204 ~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~ 282 (342)
T d1yfqa_ 204 KEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTN-LAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp GGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCS-SCCCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred CCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeeeccCCCc-ccccceeEEecCCccEEEEECCCCEEEEEECCC
Confidence 4678899999999999999866544332211100000000001112 366899999999999999999999999999999
Q ss_pred CCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 315 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
++ .+..+...| .+..++|+|++++|+.+.
T Consensus 283 ~~---------~l~~~~~~~--~~~~~~~s~~~~~l~~a~ 311 (342)
T d1yfqa_ 283 RK---------KIKNFAKFN--EDSVVKIACSDNILCLAT 311 (342)
T ss_dssp TE---------EEEECCCCS--SSEEEEEEECSSEEEEEE
T ss_pred Cc---------EEEEecCCC--CCEEEEEEeCCCEEEEEE
Confidence 87 455554344 445678888998887654
|
| >d2gx8a1 c.135.1.1 (A:4-373) Nif3-related protein BC4286 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NIF3 (NGG1p interacting factor 3)-like superfamily: NIF3 (NGG1p interacting factor 3)-like family: NIF3 (NGG1p interacting factor 3)-like domain: Nif3-related protein BC4286 species: Bacillus cereus [TaxId: 1396]
Probab=100.00 E-value=1e-35 Score=269.48 Aligned_cols=119 Identities=33% Similarity=0.607 Sum_probs=115.2
Q ss_pred cHHHHHHHHHHhCCCccCCCCCcceeeeccCCCcCcccEEEEEecCCHHHHHHHHHcCCCEEEEeCCCCcccccccCcCC
Q psy14815 356 TLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIAYHPPIFAPLKRVTNDK 435 (479)
Q Consensus 356 ~~~~~~~~l~~~~p~~~a~~wd~~Gl~v~~~~~~~~v~~il~~~d~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~~ 435 (479)
.++++++.+++++|+.+|++|||+|||||..+ ++|++|++++|+|+++++||++++||+||+|||+||+|+|+++.++
T Consensus 3 ~~~eii~~le~~~P~~lAe~wDnvGL~vg~~~--~~V~~I~valD~t~~vi~eAi~~~adlIItHHPl~f~~~k~l~~~~ 80 (370)
T d2gx8a1 3 NGHEIISLFESMYPKHLAMEGDKIGLQIGALN--KPVRHVLIALDVTEEVVDEAIQLGANVIIAHHPLIFNPLKAIHTDK 80 (370)
T ss_dssp BHHHHHHHHHHHSCGGGSCTTCCCEEEESCSS--SBCCEEEEESSCCHHHHHHHHHHTCCEEEESSCSCCSCCSCCCTTS
T ss_pred CHHHHHHHHHHhCCHhHcccCCCCeEEeCCCC--CccCEEEEEEcCCHHHHHHHHHCCCCEEEECCCCCcCCcccccCCC
Confidence 57899999999999999999999999998665 7899999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHhcCceEEeccccccccCCCccccCCCcCCCC
Q psy14815 436 WKERVVSTCLAHNIAVYSPHTTWDAIQEGRTKKAPPEVQVP 476 (479)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~h~~~d~~~~g~~~~~~~~~~~~ 476 (479)
+++|++.+||+|||+|||+|||||++++|+||+||+.||+.
T Consensus 81 ~~~~~~~~li~~~I~vys~HTnlD~~~~G~nd~La~~Lgl~ 121 (370)
T d2gx8a1 81 AYGKIIEKCIKNDIAIYAAHTNVDVAKGGVNDLLAEALGLQ 121 (370)
T ss_dssp HHHHHHHHHHHTTCEEEECCHHHHHSTTSHHHHHHHHTTCE
T ss_pred chhHHHHHHHHCCCeEEEeccchhccCCcHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999974
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.6e-32 Score=247.42 Aligned_cols=267 Identities=13% Similarity=0.167 Sum_probs=207.3
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEeccccccc-----ccccCCCccceEEEeecCCcEEEecCCCCC
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPY-----EKLHGLPVETSLRQLVEDKNIRLWGKESFG 76 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~ 76 (479)
+++++|+||.++|++++|+| |+||+.||+|++||+.++... ..+.. ..+..+++++.|+++++|+...
T Consensus 4 ~~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~~~~h~~~V~~~~~-~~~~~~~s~s~D~~v~~w~~~~-- 76 (287)
T d1pgua2 4 EVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQEYSSISWDDTLKVNGITK-- 76 (287)
T ss_dssp EEEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEEECCCCSCEEEEEC-CSTTCCEEEETTTEEEETTEEE--
T ss_pred ceeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCCCCCCCCCCEEEEEe-cCCCeEEEEeeccccccccccc--
Confidence 46889999999999999987 999999999999998876432 22222 2345678889999999999762
Q ss_pred CceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC
Q psy14815 77 NKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 156 (479)
Q Consensus 77 ~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg 156 (479)
......+.++++++++..++++ .++.+.+|+..+++ ....+..+ ..+ .++++++..+++++.++
T Consensus 77 ----------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~-~~~--~~~~~~~~~~~v~~~~~ 140 (287)
T d1pgua2 77 ----------HEFGSQPKVASANNDGFTAVLT-NDDDLLILQSFTGD--IIKSVRLN-SPG--SAVSLSQNYVAVGLEEG 140 (287)
T ss_dssp ----------EECSSCEEEEEECSSSEEEEEE-TTSEEEEEETTTCC--EEEEEECS-SCE--EEEEECSSEEEEEETTT
T ss_pred ----------cccccceeeeeeccCCceEEEe-ecccceeeecccee--eeeecccc-cee--eeeeccCcceeeecccc
Confidence 1234567888999888666665 56778999998886 34444432 333 45667788888888775
Q ss_pred -cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEcc
Q psy14815 157 -SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR 235 (479)
Q Consensus 157 -~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 235 (479)
.+++|++.... ........|...+++++|+|++++|++|+.||.|++||+.++.. ....+..|...|.+++|+|
T Consensus 141 ~~v~~~~~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~---~~~~~~~h~~~v~~~~~~p 215 (287)
T d1pgua2 141 NTIQVFKLSDLE--VSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREV---KTSRWAFRTSKINAISWKP 215 (287)
T ss_dssp SCEEEEETTEEE--EEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE---EECCSCCCSSCEEEEEECC
T ss_pred ceeeeeeccccc--eeeeeeeccCCceeEEEeccCccccccccccccccceeeccccc---ccccccccccccceeeecc
Confidence 69999987652 22223345778899999999999999999999999999987653 2345678999999999987
Q ss_pred C----------CCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCC
Q psy14815 236 I----------GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD 305 (479)
Q Consensus 236 ~----------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg 305 (479)
. +.+|++|+.|++|++||++.+.. .+..+.+| ...|++++|+|++ .|++++.|+
T Consensus 216 ~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~--------------~~~~~~~h-~~~V~~v~~~~~~-~l~s~g~D~ 279 (287)
T d1pgua2 216 AEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMK--------------IIKALNAH-KDGVNNLLWETPS-TLVSSGADA 279 (287)
T ss_dssp CC------CCSCCEEEEEETTSCEEEEESSCTTC--------------CEEETTSS-TTCEEEEEEEETT-EEEEEETTS
T ss_pred cccccccccCCCCeeEeecCCCeEEEEECCCCCe--------------EEEEeCCC-CCCeEEEEECCCC-EEEEEECCC
Confidence 5 46899999999999999865432 24556666 8899999999986 588999999
Q ss_pred eEEEccc
Q psy14815 306 AIRIFKE 312 (479)
Q Consensus 306 ~i~vw~~ 312 (479)
.|++|++
T Consensus 280 ~v~iW~i 286 (287)
T d1pgua2 280 CIKRWNV 286 (287)
T ss_dssp CEEEEEE
T ss_pred eEEEEEE
Confidence 9999985
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.8e-32 Score=260.21 Aligned_cols=304 Identities=13% Similarity=0.178 Sum_probs=209.1
Q ss_pred cccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 4 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 4 ~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
....++|.+.|+++++++ ++|+|+|.|++|+|||..+.+....... .
T Consensus 7 ~~~~~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~~----------------------------~--- 53 (393)
T d1sq9a_ 7 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDK----------------------------S--- 53 (393)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGG----------------------------E---
T ss_pred eecCCcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccce----------------------------e---
Confidence 356789999999999874 6999999999999999766543221100 0
Q ss_pred EeccccCCc------EEEEEECC-CCCEEEEEECCCeEEEEECCCCeE---EEeEEE-----eCCCCcEEEEEEcCC---
Q psy14815 84 ILSDGHQRT------IRETAWSP-CGNFIASASFDATTAVWDKRSGQF---ECNATL-----EGHENEVKSVTWSKN--- 145 (479)
Q Consensus 84 ~~~~~~~~~------v~~v~~~~-~~~~l~t~~~dg~i~iwd~~~~~~---~~~~~~-----~~~~~~v~~l~~~~~--- 145 (479)
.....|... ...+..+. ++.++++++.||.|++|++..... ...... ..+...+..++|.++
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (393)
T d1sq9a_ 54 YSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR 133 (393)
T ss_dssp EEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC--
T ss_pred EeeeeccCCceEeeeEeeeccCCCCCcEEEEEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCc
Confidence 000112222 22222222 345788999999999998754321 111111 123456778888775
Q ss_pred --CCEEEEEeCCCcEEEEEeCCCCc---------------eeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEec
Q psy14815 146 --GQFLATCSRDKSVWVWEVGEEDE---------------YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE 208 (479)
Q Consensus 146 --~~~l~~~~~dg~i~vwd~~~~~~---------------~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~ 208 (479)
+.++++++.||.+++|++..... .........+...+.+++|+|++ +|++|+.||+|++||+
T Consensus 134 ~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~ 212 (393)
T d1sq9a_ 134 LLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISEL 212 (393)
T ss_dssp --CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEET
T ss_pred ccccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEee
Confidence 45789999999999999864321 00111222345568899999987 8899999999999999
Q ss_pred CCcccce--EeeeeecCCCccEEEEEEccCCCEEEEeeCCC---eEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccc
Q psy14815 209 DKAEADW--INFATLKSHTSTVWSLAFDRIGSRLATCSDDA---TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 283 (479)
Q Consensus 209 ~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (479)
++++... .....+.+|..+|++++|+|++++|++|+.|+ .|++||+........+... .........+.+| .
T Consensus 213 ~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~--~~~~~~~~~~~gH-~ 289 (393)
T d1sq9a_ 213 STLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVP--THSSQASLGEFAH-S 289 (393)
T ss_dssp TTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC----------CCBSB-S
T ss_pred cccccccccccccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccc--cccccceeeeecc-c
Confidence 8766421 22345667999999999999999999999887 4999998665432221110 0111223344566 8
Q ss_pred ccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEecccccccccee----EEEecCCCCCCCccc
Q psy14815 284 RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVN----CVAWNPVVPEPQKTN 354 (479)
Q Consensus 284 ~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~----~~~~sp~~~~l~~~~ 354 (479)
..|++++|+|++++|++++.|++|++||+++++ ++ ..+.+|...|. .++|+|++..++...
T Consensus 290 ~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~---------~~-~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~ 354 (393)
T d1sq9a_ 290 SWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE---------RI-TTLNMHCDDIEIEEDILAVDEHGDSLAEPG 354 (393)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTE---------EE-EEEECCGGGCSSGGGCCCBCTTSCBCSSCC
T ss_pred CceeeeccCCCCCeeEEECCCCEEEEEECCCCC---------EE-EEECCcCCcccCCccEEEECCCCCEEEEcc
Confidence 899999999999999999999999999999987 44 44579998886 489999999988765
|
| >d2fywa1 c.135.1.1 (A:1-265) Hypothetical protein SP1609 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NIF3 (NGG1p interacting factor 3)-like superfamily: NIF3 (NGG1p interacting factor 3)-like family: NIF3 (NGG1p interacting factor 3)-like domain: Hypothetical protein SP1609 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=6.8e-35 Score=254.90 Aligned_cols=120 Identities=30% Similarity=0.523 Sum_probs=115.8
Q ss_pred ccHHHHHHHHHHhCCCccCCCCCcceeeeccCCCcCcccEEEEEecCCHHHHHHHHHcCCCEEEEeCCCCcccccccCcC
Q psy14815 355 LTLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIAYHPPIFAPLKRVTND 434 (479)
Q Consensus 355 ~~~~~~~~~l~~~~p~~~a~~wd~~Gl~v~~~~~~~~v~~il~~~d~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~ 434 (479)
|++.++++.+++++|+.+|++|||+|||+|..+ ++|+++++++|+|++++++|++++||+||+|||+||+|+++++.+
T Consensus 1 M~~~dii~~le~~~P~~la~~wDn~Gl~vg~~~--~~V~kI~v~lD~t~~vi~~Ai~~~adlIItHHp~~f~~~~~~~~~ 78 (265)
T d2fywa1 1 MLASEVIQAYEAFCPQEFSMEGDSRGLQIGTLD--KGIQRVMVALDIREETVAEAIEKGVDLIIVKHAPIFRPIKDLLAS 78 (265)
T ss_dssp CBHHHHHHHHHHHSCGGGSCTTCCCEEEESCSS--SBCSEEEEESCCCHHHHHHHHHTTCSEEEESSCSCCSCCCCCCTT
T ss_pred CcHHHHHHHHHHhCCHhhcCCcCcceeEecCCC--CccCEEEEEEcCCHHHHHHHHHcCCCEEEecCCcceeccccccCC
Confidence 568899999999999999999999999998665 789999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHhcCceEEeccccccccCCCccccCCCcCCCC
Q psy14815 435 KWKERVVSTCLAHNIAVYSPHTTWDAIQEGRTKKAPPEVQVP 476 (479)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~h~~~d~~~~g~~~~~~~~~~~~ 476 (479)
+++++++.+|++|||+||++|||||++++|+|++||++||+.
T Consensus 79 ~~~~~~~~~lik~~I~vy~~Ht~lD~~~~G~n~~la~~Lgl~ 120 (265)
T d2fywa1 79 RPQNQIYIDLIKHDIAVYVSHTNIDIVENGLNDWFCQMLGIE 120 (265)
T ss_dssp SHHHHHHHHHHHTTCEEEECSHHHHHSTTSHHHHHHHHHTCE
T ss_pred ChHHHHHHHHHhCCCeEEEeccchhhccCcHHHHHHHHhCCc
Confidence 999999999999999999999999999999999999999975
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.4e-31 Score=247.20 Aligned_cols=249 Identities=12% Similarity=0.161 Sum_probs=192.4
Q ss_pred ceEEEEECCCCCeEEEeeCCC-cEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecccc-C
Q psy14815 13 RVWNVSWNPQGTMISSCGEDK-NIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH-Q 90 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~~dg-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~-~ 90 (479)
.+++++|+|+++.|+.++.+. .|+.|+....... .. ....+| .
T Consensus 19 ~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~----------------------------------~~-~~~~gh~~ 63 (325)
T d1pgua1 19 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVP----------------------------------PV-VQFTGHGS 63 (325)
T ss_dssp CCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSC----------------------------------SE-EEECTTTT
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCCcc----------------------------------ce-EEEeCCCC
Confidence 568899999999999886553 3455653222110 11 112355 5
Q ss_pred CcEEEEEECC--CCCEEEEEECCCeEEEEECCCCe------EEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC--CCcEEE
Q psy14815 91 RTIRETAWSP--CGNFIASASFDATTAVWDKRSGQ------FECNATLEGHENEVKSVTWSKNGQFLATCSR--DKSVWV 160 (479)
Q Consensus 91 ~~v~~v~~~~--~~~~l~t~~~dg~i~iwd~~~~~------~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--dg~i~v 160 (479)
..|++++|+| ++.+|++|+.||+|+|||+..++ ......+..|.++|.+++|+++++++++++. ++.+++
T Consensus 64 ~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~ 143 (325)
T d1pgua1 64 SVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVF 143 (325)
T ss_dssp SCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEE
T ss_pred CCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEE
Confidence 7899999998 56899999999999999986542 1122345678899999999999999888765 678999
Q ss_pred EEeCCCCceeeeeeeeccccceeEEEEecCCCE-EEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccC-CC
Q psy14815 161 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI-LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GS 238 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~ 238 (479)
|+.+++ ..+..+.+|...|++++|+|+++. +++++.|+.+++||....+. .........|...|.+++|+|+ +.
T Consensus 144 ~~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~-~~~~~~~~~~~~~v~~v~~~pd~~~ 219 (325)
T d1pgua1 144 ISWDSG---NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKF-SASDRTHHKQGSFVRDVEFSPDSGE 219 (325)
T ss_dssp EETTTC---CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEE-EEEECSSSCTTCCEEEEEECSTTCC
T ss_pred Eeeccc---ccceeeeecccccccccccccccceEEEeeccccccccccccccc-ceecccccCCCCccEEeeeccccce
Confidence 999877 566778889999999999998764 77899999999999886553 1233445678889999999996 68
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec---CCCCeEEEEeCCCeEEEcccCCC
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC---HLTDLIATACGDDAIRIFKENPE 315 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~---~~~~~l~~~~~dg~i~vw~~~~~ 315 (479)
+|++++.|+.|++||++.. +++..+.+| ..++.++.|+ |++++|++++.|+.|+|||++++
T Consensus 220 ~l~s~~~d~~i~iwd~~~~---------------~~~~~l~~~-~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~ 283 (325)
T d1pgua1 220 FVITVGSDRKISCFDGKSG---------------EFLKYIEDD-QEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTS 283 (325)
T ss_dssp EEEEEETTCCEEEEETTTC---------------CEEEECCBT-TBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTT
T ss_pred eccccccccceeeeeeccc---------------ccccccccc-ccccccceeeeeccCCCEEEEEeCCCeEEEEECCCC
Confidence 8999999999999998433 556777776 5555555544 68899999999999999999988
Q ss_pred C
Q psy14815 316 A 316 (479)
Q Consensus 316 ~ 316 (479)
+
T Consensus 284 ~ 284 (325)
T d1pgua1 284 K 284 (325)
T ss_dssp E
T ss_pred C
Confidence 6
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-30 Score=233.33 Aligned_cols=279 Identities=20% Similarity=0.308 Sum_probs=218.0
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCC--------ccceEEEeecCCcEEEecCC
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLP--------VETSLRQLVEDKNIRLWGKE 73 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~--------~~~~~~~~~~~~~i~~w~~~ 73 (479)
..++.+.+|...|+|++| |+++||||+.||+|+|||+.+++.+..+.+|. ++..+++++.|+.+++|+..
T Consensus 6 ~~i~~~~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~~~~~l~s~s~D~~i~~~~~~ 83 (293)
T d1p22a2 6 QRIHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVN 83 (293)
T ss_dssp CCEECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESS
T ss_pred EEEeccCCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeecccceeecccccccccccccc
Confidence 456677789999999765 79999999999999999999999988887763 45678889999999999998
Q ss_pred CCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeE-EEeEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy14815 74 SFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF-ECNATLEGHENEVKSVTWSKNGQFLATC 152 (479)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~~~ 152 (479)
........ ..+... ...+.+....++++..++.+.+|+..+... .....+..|...+.++.+.+ ..++++
T Consensus 84 ~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~ 154 (293)
T d1p22a2 84 TGEMLNTL-----IHHCEA--VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSA 154 (293)
T ss_dssp SCCEEEEE-----CCCCSC--EEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEET--TEEEEE
T ss_pred cccccccc-----cccccc--cccccccccceeecccccceeEeeccccccccccccccccccccccceecc--cccccc
Confidence 53221111 112222 233455667899999999999999887542 34456677888888888764 578899
Q ss_pred eCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEE
Q psy14815 153 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLA 232 (479)
Q Consensus 153 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 232 (479)
+.|+.+++||+++. +.+..+.++...+..+.++ +..+++++.||.|++||+++... +.....|...+..
T Consensus 155 s~d~~i~~~d~~~~---~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~v~~-- 223 (293)
T d1p22a2 155 SGDRTIKVWNTSTC---EFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGAC----LRVLEGHEELVRC-- 223 (293)
T ss_dssp ETTSEEEEEETTTC---CEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCE----EEEECCCSSCEEE--
T ss_pred cCCCceeeecCCCC---cEEEEEcccccccccccCC--CCeEEEecCCCEEEEEeccccee----eeeecccceeeee--
Confidence 99999999999987 5566677888888887776 57899999999999999997653 6677788888765
Q ss_pred EccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcc
Q psy14815 233 FDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 311 (479)
Q Consensus 233 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~ 311 (479)
+++++.+|++++.||.|++||+......... ....++..+.+| ..+|++++|+ +.+|++++.||+|++||
T Consensus 224 ~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~------~~~~~~~~~~~H-~~~V~~v~~d--~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 224 IRFDNKRIVSGAYDGKIKVWDLVAALDPRAP------AGTLCLRTLVEH-SGRVFRLQFD--EFQIVSSSHDDTILIWD 293 (293)
T ss_dssp EECCSSEEEEEETTSCEEEEEHHHHTSTTSC------TTTTEEEEECCC-SSCCCCEEEC--SSCEEECCSSSEEEEEC
T ss_pred ccccceEEEEEcCCCEEEEEECCCCcccccc------CCceeeEEecCC-CCCEEEEEEc--CCEEEEEecCCEEEEeC
Confidence 4567889999999999999998765443221 222467788887 7899999994 56899999999999997
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.98 E-value=9.9e-31 Score=243.32 Aligned_cols=278 Identities=18% Similarity=0.297 Sum_probs=210.6
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccC------------CCccceEEEeecCCcEEE
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHG------------LPVETSLRQLVEDKNIRL 69 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~------------~~~~~~~~~~~~~~~i~~ 69 (479)
.++++|++|+++|++++|+|+ .+|++|+.||+|++|+....+....... .+....++.++.|+.+++
T Consensus 44 ~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i 122 (355)
T d1nexb2 44 KFLLQLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHV 122 (355)
T ss_dssp EEEEEEECCSSCEEEEEEETT-TEEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEE
T ss_pred cEEEEEECCCCCEEEEEEcCC-CEEEEEecccccccccccccccccccccccccccccccccccccceeeeecCCCcEEE
Confidence 357889999999999999985 5899999999999999987765544332 234566788899999999
Q ss_pred ecCCCCCCceee------------------eEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe
Q psy14815 70 WGKESFGNKFTA------------------KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE 131 (479)
Q Consensus 70 w~~~~~~~~~~~------------------~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~ 131 (479)
|++......... .......|...+.+ +.+++++++++..|+.|++||+.+++ ......
T Consensus 123 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~~~~~d~~i~~~d~~~~~--~~~~~~ 198 (355)
T d1nexb2 123 WKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRT--VSGHGNIVVSGSYDNTLIVWDVAQMK--CLYILS 198 (355)
T ss_dssp EECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEE--EEEETTEEEEEETTSCEEEEETTTTE--EEEEEC
T ss_pred EEccCCceeccccccceeccceeccccccceeeeeeeccccccc--cccccceeeeecccceeeeeeccccc--ceeeee
Confidence 998753221110 01111233344443 44567899999999999999999986 567778
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCc
Q psy14815 132 GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 211 (479)
Q Consensus 132 ~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~ 211 (479)
++...+.++.|++++..+++++.|+.|++||++++ .....+.+|...|.+++++ +++|++|+.||.|++||+++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~---~~~~~~~~h~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~ 273 (355)
T d1nexb2 199 GHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG---ELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDY 273 (355)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTC---CEEEEECCCSSCCCEEEEC--SSEEEEECTTSEEEEEETTTC
T ss_pred ccccccccccccccceeeecccccceEEeeecccc---ccccccccccccccccccc--cceeeeeeccccccccccccc
Confidence 88899999999999999999999999999999987 5667788999999999987 478999999999999999865
Q ss_pred ccceEeeeeecCCCccEEEE-EEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEE
Q psy14815 212 EADWINFATLKSHTSTVWSL-AFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS 290 (479)
Q Consensus 212 ~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 290 (479)
.. .+..|...+.++ .++++++++++| .|+.|++||++.++... ..+.+ |..+|.+++
T Consensus 274 ~~------~~~~~~~~~~~~~~~~~~~~~l~~g-~d~~i~vwd~~tg~~~~--------------~~~~~-~~~~V~~v~ 331 (355)
T d1nexb2 274 SR------KFSYHHTNLSAITTFYVSDNILVSG-SENQFNIYNLRSGKLVH--------------ANILK-DADQIWSVN 331 (355)
T ss_dssp CE------EEEEECTTCCCCCEEEECSSEEEEE-ETTEEEEEETTTCCBCC--------------SCTTT-TCSEEEEEE
T ss_pred ce------ecccccCCceEEEEEcCCCCEEEEE-eCCEEEEEECCCCCEEE--------------EEecC-CCCCEEEEE
Confidence 53 233455555555 456666666655 58999999996654321 12234 377999999
Q ss_pred ecCCCCeEEEEeCCCeEEEccc
Q psy14815 291 WCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 291 ~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
|+|+ .++++++.||.++||.+
T Consensus 332 ~~~~-~~~~~~s~dg~~~l~~~ 352 (355)
T d1nexb2 332 FKGK-TLVAAVEKDGQSFLEIL 352 (355)
T ss_dssp EETT-EEEEEEESSSCEEEEEE
T ss_pred EcCC-eEEEEEECCCcEEEEEE
Confidence 9986 47888899999777644
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.1e-28 Score=228.10 Aligned_cols=277 Identities=26% Similarity=0.416 Sum_probs=212.4
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC--------CccceEEEeecCCcEEEecCC
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL--------PVETSLRQLVEDKNIRLWGKE 73 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~--------~~~~~~~~~~~~~~i~~w~~~ 73 (479)
.++++|++|.+.|++++|+|+ +|++|+.|+++++|+............. ...........++.+.+|+..
T Consensus 48 ~~~~~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~ 125 (342)
T d2ovrb2 48 KCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIE 125 (342)
T ss_dssp CEEEECCCCSSCEEEEEEETT--EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESS
T ss_pred CEEEEEeCCCCCEEEEEeCCC--ccccceecccccccccccccceecccccceeEeeeecccccccccccceeEEEeecc
Confidence 457889999999999999874 9999999999999998776654443332 223456667788999999987
Q ss_pred CCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe
Q psy14815 74 SFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS 153 (479)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~ 153 (479)
........ ..+.... ..+.+....+++++.|+.|++||....+ ....+.+|...+..+.+ ++.++++|+
T Consensus 126 ~~~~~~~~-----~~~~~~~--~~~~~~~~~~~~~~~d~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~--~~~~l~s~~ 194 (342)
T d2ovrb2 126 TGQCLHVL-----MGHVAAV--RCVQYDGRRVVSGAYDFMVKVWDPETET--CLHTLQGHTNRVYSLQF--DGIHVVSGS 194 (342)
T ss_dssp SCCEEEEE-----ECCSSCE--EEEEECSSCEEEEETTSCEEEEEGGGTE--EEEEECCCSSCEEEEEE--CSSEEEEEE
T ss_pred cccceeee-----ecccccc--eeeccccceeeeecCCCeEEEeecccce--eeEEEcCcccccccccC--CCCEEEEEe
Confidence 43221111 1122222 2334456789999999999999998886 66778888877666555 688999999
Q ss_pred CCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEE
Q psy14815 154 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF 233 (479)
Q Consensus 154 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~ 233 (479)
.||.|++||++.. ..+..+..|...+.++.++ +++|++|+.||.|++||....+. ...+.....|...+.++.+
T Consensus 195 ~dg~i~~~d~~~~---~~~~~~~~~~~~v~~~~~~--~~~l~s~s~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~ 268 (342)
T d2ovrb2 195 LDTSIRVWDVETG---NCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQC-LQTLQGPNKHQSAVTCLQF 268 (342)
T ss_dssp TTSCEEEEETTTC---CEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCE-EEEECSTTSCSSCEEEEEE
T ss_pred CCCeEEEeecccc---eeeeEecccccceeEEecC--CCEEEEEcCCCEEEEEecccccc-cccccccceeeeceeeccc
Confidence 9999999999987 5567788899999888876 46999999999999999987653 1223334457778888777
Q ss_pred ccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEe----ccccccEEEEEecCCCCeEEEEeCCCe---
Q psy14815 234 DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS----GHHGRTIYDISWCHLTDLIATACGDDA--- 306 (479)
Q Consensus 234 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~l~~~~~~~~l~~~~~dg~--- 306 (479)
+ ++++++|+.||.|++||++.+ +++..+. ..+...|++++|+|++.++++|+.||+
T Consensus 269 ~--~~~~~s~s~Dg~i~iwd~~tg---------------~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~ 331 (342)
T d2ovrb2 269 N--KNFVITSSDDGTVKLWDLKTG---------------EFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEET 331 (342)
T ss_dssp C--SSEEEEEETTSEEEEEETTTC---------------CEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCC
T ss_pred C--CCeeEEEcCCCEEEEEECCCC---------------CEEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCee
Confidence 6 569999999999999998544 3344443 224678999999999999999999985
Q ss_pred -EEEcccCC
Q psy14815 307 -IRIFKENP 314 (479)
Q Consensus 307 -i~vw~~~~ 314 (479)
|++||++.
T Consensus 332 ~l~~~Df~~ 340 (342)
T d2ovrb2 332 KLLVLDFDV 340 (342)
T ss_dssp EEEEEECCC
T ss_pred EEEEEeCCC
Confidence 99999875
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.97 E-value=4.8e-29 Score=227.03 Aligned_cols=237 Identities=17% Similarity=0.209 Sum_probs=181.8
Q ss_pred cccc-cccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccc---cCC---------CccceEEEeecCCcEEEe
Q psy14815 4 SQTL-KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKL---HGL---------PVETSLRQLVEDKNIRLW 70 (479)
Q Consensus 4 ~~~l-~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~---~~~---------~~~~~~~~~~~~~~i~~w 70 (479)
++++ .+|...|++++|+|++++ ++++.|+.+++|+.......... ..+ ..+..++....++.+.+|
T Consensus 47 ~~~~~~~h~~~v~~v~~~~~g~~-~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~ 125 (299)
T d1nr0a2 47 NRVFPDVHATMITGIKTTSKGDL-FTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIY 125 (299)
T ss_dssp EECSSCSCSSCEEEEEECTTSCE-EEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEE
T ss_pred EEEEcCCCCCcEEEEEeecccee-ecccceeeEEEeccCCcccccccccccccccccccccccccccccccccccccccc
Confidence 4455 479999999999999975 55667999999997654321110 001 112234455566788888
Q ss_pred cCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEE
Q psy14815 71 GKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA 150 (479)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~ 150 (479)
+... ... ......+.+++|+|+++++++|+.||.|++||+++++.... ....|...|.+++|+|++++|+
T Consensus 126 ~~~~------~~~---~~~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~ 195 (299)
T d1nr0a2 126 SHGK------LTE---VPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEV-KTIVHPAEITSVAFSNNGAFLV 195 (299)
T ss_dssp ETTE------EEE---EECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEE-EEEECSSCEEEEEECTTSSEEE
T ss_pred cccc------ccc---ccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccc
Confidence 7541 111 12445688999999999999999999999999988864433 3445889999999999999999
Q ss_pred EEeCCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecC-CCccEE
Q psy14815 151 TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS-HTSTVW 229 (479)
Q Consensus 151 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~~~~v~ 229 (479)
+++.|+.|++||+.+.........+..|..+|++++|+|++++|++|+.||.|++||++++... ....... +...+.
T Consensus 196 ~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~--~~~~~~~~~~~~v~ 273 (299)
T d1nr0a2 196 ATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDH--PIIIKGAHAMSSVN 273 (299)
T ss_dssp EEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSC--CEEETTSSTTSCEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccceEEEcCCCEEEEEECCCCCcc--eEEEecCCCCCcEE
Confidence 9999999999999987666666677889999999999999999999999999999999876542 2223333 445676
Q ss_pred EEEEccCCCEEEEeeCCCeEEEEec
Q psy14815 230 SLAFDRIGSRLATCSDDATVKIWKE 254 (479)
Q Consensus 230 ~~~~~~~~~~l~s~~~dg~i~iwd~ 254 (479)
++.| +++++|++++.|++|++||+
T Consensus 274 ~~~~-~~~~~l~s~s~D~~i~iWdl 297 (299)
T d1nr0a2 274 SVIW-LNETTIVSAGQDSNIKFWNV 297 (299)
T ss_dssp EEEE-EETTEEEEEETTSCEEEEEC
T ss_pred EEEE-CCCCEEEEEeCCCEEEEEec
Confidence 6655 56789999999999999997
|
| >d1nmpa_ c.135.1.1 (A:) Hypothetical protein YbgI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NIF3 (NGG1p interacting factor 3)-like superfamily: NIF3 (NGG1p interacting factor 3)-like family: NIF3 (NGG1p interacting factor 3)-like domain: Hypothetical protein YbgI species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=2.3e-31 Score=230.77 Aligned_cols=118 Identities=19% Similarity=0.271 Sum_probs=109.2
Q ss_pred ccHHHHHHHHHHhCCCccCCCCCcceeeeccCCCcCcccEEEEEecCCHHHHHHHHHcCCCEEEEeCCCCcccccccCcC
Q psy14815 355 LTLHDVVRRLEAMAPLSLAEPWDNVGLLIEPHNTTKHIKNIMLTIDLTDEVLKEAVENGTDLIIAYHPPIFAPLKRVTND 434 (479)
Q Consensus 355 ~~~~~~~~~l~~~~p~~~a~~wd~~Gl~v~~~~~~~~v~~il~~~d~t~~~~~~a~~~~~~~i~~~h~~~~~~~~~~~~~ 434 (479)
|++.++.+.+++.+|+..+++||++||||+.. ++|++|++|+|+|++++++|+++|+|+||||||+||+|++.+. .
T Consensus 1 M~~~el~~~l~~~~~~~~~~d~d~~GL~vg~~---~~V~kI~v~lD~t~~vi~~A~~~g~dlIItHHP~~f~~~~~~~-~ 76 (247)
T d1nmpa_ 1 MKNTELEQLINEKLNSAAISDYAPNGLQVEGK---ETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVI-R 76 (247)
T ss_dssp CBHHHHHHHHHHHTTCTTCCCSSCCEEEECCC---SBCCEEEEEEECCHHHHHHHHHTTCSEEEEEECSCCTTCCCCC-C
T ss_pred CcHHHHHHHHHhhcCHhhccCCCCCceEeCCc---cccCEEEEEEcCCHHHHHHHHHCCCCEEEECCccccCCCCccc-c
Confidence 56889999999999999999999999999753 6899999999999999999999999999999999999998876 5
Q ss_pred ChhhHHHHHHHhcCceEEeccccccccC-CCccccCCCcCCCC
Q psy14815 435 KWKERVVSTCLAHNIAVYSPHTTWDAIQ-EGRTKKAPPEVQVP 476 (479)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~h~~~d~~~-~g~~~~~~~~~~~~ 476 (479)
++.++++.+|+++||+||++|||+|+++ +|+|+.||++||+.
T Consensus 77 ~~~~~~i~~lik~~I~vy~~Htn~D~~~~~G~~~~La~~lg~~ 119 (247)
T d1nmpa_ 77 GMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGIT 119 (247)
T ss_dssp HHHHHHHHHHHHTTCEEEECCHHHHHCTTTSHHHHHHHHTTEE
T ss_pred CcchHHHHHHHHCCcceEEccCCcccccccchHHHHHHHhhhc
Confidence 5667789999999999999999999987 69999999999975
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.96 E-value=3.6e-28 Score=226.92 Aligned_cols=274 Identities=9% Similarity=0.025 Sum_probs=203.5
Q ss_pred EEEEECC-CCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcE
Q psy14815 15 WNVSWNP-QGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 93 (479)
Q Consensus 15 ~~l~~s~-~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v 93 (479)
..-.||| ||+++|+++ +|.|.+||+..+.... .+|...|
T Consensus 6 ~~~~fSP~dG~~~a~~~-~g~v~v~d~~~~~~~~---------------------------------------~~~~~~v 45 (360)
T d1k32a3 6 FAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK---------------------------------------VPEPLRI 45 (360)
T ss_dssp GEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE---------------------------------------CSCCSCE
T ss_pred hcccccCCCCCEEEEEE-CCeEEEEECCCCcEEE---------------------------------------ccCCCCE
Confidence 4467999 999999987 5789999986554321 2588899
Q ss_pred EEEEECCCCCEEEEEECCC--eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceee
Q psy14815 94 RETAWSPCGNFIASASFDA--TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYEC 171 (479)
Q Consensus 94 ~~v~~~~~~~~l~t~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 171 (479)
.+++|+|||++|++++.+. .|++||.++++ ...+..|...+.+++|+|++++|++++.++.+++|++.+. ..
T Consensus 46 ~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~---~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~---~~ 119 (360)
T d1k32a3 46 RYVRRGGDTKVAFIHGTREGDFLGIYDYRTGK---AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG---KP 119 (360)
T ss_dssp EEEEECSSSEEEEEEEETTEEEEEEEETTTCC---EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTC---CE
T ss_pred EEEEECCCCCEEEEEEcCCCCEEEEEECCCCc---EEEeeCCCceEEeeeecccccccceecccccccccccccc---ce
Confidence 9999999999998877654 79999999985 4466789999999999999999999999999999999887 44
Q ss_pred eeeeeccccceeEEEEecCCCEEEEEE----------cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE
Q psy14815 172 AAVINAHIQDVKKVRFHPFDNILASAS----------YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 172 ~~~~~~~~~~v~~l~~~~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 241 (479)
...+..|...+.+++|+|+|++|+.+. .++.+++||..+++ ...+..+...+..++|+|+|++|+
T Consensus 120 ~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~-----~~~~~~~~~~~~~~~~spdg~~l~ 194 (360)
T d1k32a3 120 TVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-----IFAATTENSHDYAPAFDADSKNLY 194 (360)
T ss_dssp EEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-----EEECSCSSSBEEEEEECTTSCEEE
T ss_pred eeeeecccccccchhhccceeeeeeeccccccceeeccccceeeeccccCc-----eeeecccccccccccccCCCCEEE
Confidence 556777888899999999999998654 34568999998755 244556778889999999999999
Q ss_pred EeeCCCeEEEEeccCCCCCCC-------------------C-------CCCCC--CC----c------eEEEEEEecccc
Q psy14815 242 TCSDDATVKIWKEYKPGNSAG-------------------I-------PTPDN--DS----V------WKCVCTLSGHHG 283 (479)
Q Consensus 242 s~~~dg~i~iwd~~~~~~~~~-------------------~-------~~~~~--~~----~------~~~~~~~~~~~~ 283 (479)
+++.++.+++|+......... . ..... .. . ......+..+ .
T Consensus 195 ~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 273 (360)
T d1k32a3 195 YLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPL-E 273 (360)
T ss_dssp EEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEEC-S
T ss_pred EEeCCCceEcccccccceeeccccceEEEecccCccccceECCCcCcccccceeecccccceeecccCcCceeEeeec-C
Confidence 999999999998643211000 0 00000 00 0 0001112222 2
Q ss_pred ccEEEEEecCCC---CeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 284 RTIYDISWCHLT---DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 284 ~~i~~l~~~~~~---~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
..+..+.+.+.+ .++++++.++.+++||+.+++ . ..|.+.|.+++|||||++|+.+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~----------~----~~~~~~v~~~~~SpDG~~l~~~~ 333 (360)
T d1k32a3 274 SSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK----------V----TEVKNNLTDLRLSADRKTVMVRK 333 (360)
T ss_dssp SEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCC----------E----EEEEEEEEEEEECTTSCEEEEEE
T ss_pred CCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCe----------E----EEecCCcCEEEECCCCCEEEEEE
Confidence 334444444433 367788889999999998876 2 23556799999999999997654
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=2.2e-26 Score=217.91 Aligned_cols=236 Identities=17% Similarity=0.201 Sum_probs=168.6
Q ss_pred CCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCC-
Q psy14815 23 GTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC- 101 (479)
Q Consensus 23 ~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~- 101 (479)
+.++++++.||.|++|++........+... .........+...+..++|.++
T Consensus 79 ~~~~~s~~~dg~v~~w~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~ 131 (393)
T d1sq9a_ 79 LCLVATTSFSGDLLFYRITREDETKKVIFE---------------------------KLDLLDSDMKKHSFWALKWGASN 131 (393)
T ss_dssp EEEEEEEETTSCEEEEEEEECTTTCCEEEE---------------------------EECCSCTTGGGSCEEEEEEECCC
T ss_pred CcEEEEEeCCCcEEEEEccCCCceeeeecc---------------------------ccceeeeccCCCceEEEEEecCC
Confidence 457889999999999997655443322100 0000111335566777888764
Q ss_pred ----CCEEEEEECCCeEEEEECCCCe-------------EEE---eEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14815 102 ----GNFIASASFDATTAVWDKRSGQ-------------FEC---NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161 (479)
Q Consensus 102 ----~~~l~t~~~dg~i~iwd~~~~~-------------~~~---~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vw 161 (479)
+.++++++.||++++|++.... ... ......+...+.+++|+|++ +|++|+.||.|++|
T Consensus 132 ~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iw 210 (393)
T d1sq9a_ 132 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQIS 210 (393)
T ss_dssp ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEE
T ss_pred CcccccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEE
Confidence 4689999999999999974211 111 11122345668999999987 89999999999999
Q ss_pred EeCCCCcee---eeeeeeccccceeEEEEecCCCEEEEEEcCCc---EEEEecCCcccce---------EeeeeecCCCc
Q psy14815 162 EVGEEDEYE---CAAVINAHIQDVKKVRFHPFDNILASASYDDT---VKLFKEDKAEADW---------INFATLKSHTS 226 (479)
Q Consensus 162 d~~~~~~~~---~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~---i~i~d~~~~~~~~---------~~~~~~~~~~~ 226 (479)
|+++.+... ....+.+|..+|++++|+|++++|++|+.|++ |++||++++.... .....+.+|..
T Consensus 211 d~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~ 290 (393)
T d1sq9a_ 211 ELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSS 290 (393)
T ss_dssp ETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSS
T ss_pred eecccccccccccccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccC
Confidence 999875332 23345679999999999999999999999874 8999998765311 11223457999
Q ss_pred cEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEE----EEEecCCCCeEEEEe
Q psy14815 227 TVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIY----DISWCHLTDLIATAC 302 (479)
Q Consensus 227 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~----~l~~~~~~~~l~~~~ 302 (479)
.|++++|+|++++|++|+.|++|++||+. +++++.++.+| ...|. .++|+|++..+++++
T Consensus 291 ~V~~l~fspd~~~l~S~s~D~~v~vWd~~---------------~g~~~~~l~gH-~~~v~~~~~~~~~~~~~~~~~~~~ 354 (393)
T d1sq9a_ 291 WVMSLSFNDSGETLCSAGWDGKLRFWDVK---------------TKERITTLNMH-CDDIEIEEDILAVDEHGDSLAEPG 354 (393)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETT---------------TTEEEEEEECC-GGGCSSGGGCCCBCTTSCBCSSCC
T ss_pred ceeeeccCCCCCeeEEECCCCEEEEEECC---------------CCCEEEEECCc-CCcccCCccEEEECCCCCEEEEcc
Confidence 99999999999999999999999999984 34778888887 55554 467777777665443
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=9.5e-26 Score=203.29 Aligned_cols=235 Identities=23% Similarity=0.400 Sum_probs=189.5
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCC--------CccceEEEeecCCcEEEecCC
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGL--------PVETSLRQLVEDKNIRLWGKE 73 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~--------~~~~~~~~~~~~~~i~~w~~~ 73 (479)
.++++|++|++.|++++| ++++|++|+.||+|++|++..+......... .....++....++.+.+|+..
T Consensus 46 ~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (293)
T d1p22a2 46 ECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMA 123 (293)
T ss_dssp CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECS
T ss_pred cEEEEEecCCCCEeeeec--ccceeecccccccccccccccccccccccccccccccccccccceeecccccceeEeecc
Confidence 467889999999999987 5789999999999999999887765554432 345567888899999999988
Q ss_pred CCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe
Q psy14815 74 SFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS 153 (479)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~ 153 (479)
...... .......|...+.++.+.+ ..+++++.|+.|++||+++++ .+..+.++...+..+.++ +..+++++
T Consensus 124 ~~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~~~s~d~~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~--~~~l~~~~ 195 (293)
T d1p22a2 124 SPTDIT--LRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCE--FVRTLNGHKRGIACLQYR--DRLVVSGS 195 (293)
T ss_dssp SSSCCE--EEEEECCCSSCEEEEEEET--TEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEEE--TTEEEEEE
T ss_pred cccccc--ccccccccccccccceecc--cccccccCCCceeeecCCCCc--EEEEEcccccccccccCC--CCeEEEec
Confidence 544332 2333467888998888764 578899999999999999987 567788888888888775 56899999
Q ss_pred CCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCccc-----ceEeeeeecCCCccE
Q psy14815 154 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA-----DWINFATLKSHTSTV 228 (479)
Q Consensus 154 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~-----~~~~~~~~~~~~~~v 228 (479)
.||.|++||+++. ..+.....+...+.. +++++.+|++|+.||.|++||+..... ....+..+.+|.+.|
T Consensus 196 ~dg~i~i~d~~~~---~~~~~~~~~~~~v~~--~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V 270 (293)
T d1p22a2 196 SDNTIRLWDIECG---ACLRVLEGHEELVRC--IRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRV 270 (293)
T ss_dssp TTSCEEEEETTTC---CEEEEECCCSSCEEE--EECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCC
T ss_pred CCCEEEEEecccc---eeeeeecccceeeee--ccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCE
Confidence 9999999999987 455666777777765 556788999999999999999864321 123467788999999
Q ss_pred EEEEEccCCCEEEEeeCCCeEEEEe
Q psy14815 229 WSLAFDRIGSRLATCSDDATVKIWK 253 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~~~dg~i~iwd 253 (479)
++++|+ +++|++|+.||+|++||
T Consensus 271 ~~v~~d--~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 271 FRLQFD--EFQIVSSSHDDTILIWD 293 (293)
T ss_dssp CCEEEC--SSCEEECCSSSEEEEEC
T ss_pred EEEEEc--CCEEEEEecCCEEEEeC
Confidence 999995 56899999999999997
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.95 E-value=1.3e-26 Score=216.23 Aligned_cols=244 Identities=10% Similarity=0.035 Sum_probs=183.2
Q ss_pred ccccceEEEEECCCCCeEEEeeCCC--cEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEec
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCGEDK--NIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILS 86 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~ 86 (479)
+|...|++++|+|||++|++++.+. .|++||.++++... .
T Consensus 40 ~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~--------------------------------------~ 81 (360)
T d1k32a3 40 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEK--------------------------------------F 81 (360)
T ss_dssp SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEE--------------------------------------C
T ss_pred cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEEE--------------------------------------e
Confidence 6999999999999999998876553 78999987655322 2
Q ss_pred cccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe----------CCC
Q psy14815 87 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS----------RDK 156 (479)
Q Consensus 87 ~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~----------~dg 156 (479)
..|...|.+++|+|++++|++++.++.+++|++.+++ ....+..|...+.+++|+|+|++|+.+. .++
T Consensus 82 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~ 159 (360)
T d1k32a3 82 EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK--PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQ 159 (360)
T ss_dssp CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC--EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEE
T ss_pred eCCCceEEeeeecccccccceeccccccccccccccc--eeeeeecccccccchhhccceeeeeeeccccccceeecccc
Confidence 4688999999999999999999999999999999987 5566778888999999999999998654 345
Q ss_pred cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccce----Ee---------------
Q psy14815 157 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW----IN--------------- 217 (479)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~----~~--------------- 217 (479)
.+++||+.+++ . ..+..+...+..++|+|+|+.|++++.++.+.+||........ ..
T Consensus 160 ~~~v~d~~~~~---~-~~~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (360)
T d1k32a3 160 AIHVYDMEGRK---I-FAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKL 235 (360)
T ss_dssp EEEEEETTTTE---E-EECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGC
T ss_pred ceeeeccccCc---e-eeecccccccccccccCCCCEEEEEeCCCceEcccccccceeeccccceEEEecccCccccceE
Confidence 68999998863 2 2344566778899999999999999999999999865322100 00
Q ss_pred --------------------eeeecCCCccEEEEEEccCC-------------CEEEEeeCCCeEEEEeccCCCCCCCCC
Q psy14815 218 --------------------FATLKSHTSTVWSLAFDRIG-------------SRLATCSDDATVKIWKEYKPGNSAGIP 264 (479)
Q Consensus 218 --------------------~~~~~~~~~~v~~~~~~~~~-------------~~l~s~~~dg~i~iwd~~~~~~~~~~~ 264 (479)
+..+....+....+...+++ .++++++.++.|++||+....
T Consensus 236 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~------ 309 (360)
T d1k32a3 236 VPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK------ 309 (360)
T ss_dssp CCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCC------
T ss_pred CCCcCcccccceeecccccceeecccCcCceeEeeecCCCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCe------
Confidence 00000111122233333222 234556678899999974431
Q ss_pred CCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 265 TPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
...+ ...|.+++|+|||++|++++.||.|++||++.++
T Consensus 310 ----------~~~~----~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~ 347 (360)
T d1k32a3 310 ----------VTEV----KNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPE 347 (360)
T ss_dssp ----------EEEE----EEEEEEEEECTTSCEEEEEETTSCEEEEESSCTT
T ss_pred ----------EEEe----cCCcCEEEECCCCCEEEEEECCCeEEEEECCCCC
Confidence 1122 3468999999999999999999999999999887
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=1.6e-25 Score=202.23 Aligned_cols=232 Identities=12% Similarity=0.130 Sum_probs=174.1
Q ss_pred cccccccceEEEEECCCCCeEEEeeCCCcEEEEeccccccc---ccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 6 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPY---EKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 6 ~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
..++|...|.+++|++++ .+++++.|+++++|++...+.. ..+...+ +...+....++.+.+|+........
T Consensus 41 ~~~~h~~~V~~~~~~~~~-~~~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--- 115 (287)
T d1pgua2 41 MHQDHSNLIVSLDNSKAQ-EYSSISWDDTLKVNGITKHEFGSQPKVASANN-DGFTAVLTNDDDLLILQSFTGDIIK--- 115 (287)
T ss_dssp EECCCCSCEEEEECCSTT-CCEEEETTTEEEETTEEEEECSSCEEEEEECS-SSEEEEEETTSEEEEEETTTCCEEE---
T ss_pred CCCCCCCCEEEEEecCCC-eEEEEeeccccccccccccccccceeeeeecc-CCceEEEeecccceeeeccceeeee---
Confidence 457899999999999764 6799999999999998764422 2222223 3444555666777888776422111
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCC-eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDA-TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 161 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vw 161 (479)
. ..+...+. ++++++..+++++.++ .+++|++...+. .......|...+++++|+|++.+|++|+.||.|++|
T Consensus 116 ~---~~~~~~~~--~~~~~~~~~~v~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~ 189 (287)
T d1pgua2 116 S---VRLNSPGS--AVSLSQNYVAVGLEEGNTIQVFKLSDLEV-SFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLY 189 (287)
T ss_dssp E---EECSSCEE--EEEECSSEEEEEETTTSCEEEEETTEEEE-EEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred e---ccccceee--eeeccCcceeeeccccceeeeeeccccce-eeeeeeccCCceeEEEeccCccccccccccccccce
Confidence 1 12233443 4566778888888775 799999876542 222223477889999999999999999999999999
Q ss_pred EeCCCCceeeeeeeeccccceeEEEEecC----------CCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEE
Q psy14815 162 EVGEEDEYECAAVINAHIQDVKKVRFHPF----------DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSL 231 (479)
Q Consensus 162 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~----------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~ 231 (479)
|+.+.. .....+..|..+|.+++|+|. +.+|++|+.|+.|++||++++.. .+..+.+|...|+++
T Consensus 190 d~~~~~--~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~---~~~~~~~h~~~V~~v 264 (287)
T d1pgua2 190 DLQSRE--VKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMK---IIKALNAHKDGVNNL 264 (287)
T ss_dssp ETTTTE--EEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTC---CEEETTSSTTCEEEE
T ss_pred eecccc--cccccccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCe---EEEEeCCCCCCeEEE
Confidence 998863 223456789999999999875 46899999999999999986542 466778999999999
Q ss_pred EEccCCCEEEEeeCCCeEEEEec
Q psy14815 232 AFDRIGSRLATCSDDATVKIWKE 254 (479)
Q Consensus 232 ~~~~~~~~l~s~~~dg~i~iwd~ 254 (479)
+|+|++ .|++++.|+.|++|++
T Consensus 265 ~~~~~~-~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 265 LWETPS-TLVSSGADACIKRWNV 286 (287)
T ss_dssp EEEETT-EEEEEETTSCEEEEEE
T ss_pred EECCCC-EEEEEECCCeEEEEEE
Confidence 999976 6889999999999996
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.93 E-value=1.1e-23 Score=193.70 Aligned_cols=254 Identities=12% Similarity=0.065 Sum_probs=180.5
Q ss_pred ccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeE-EEeEEEeCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEEe
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF-ECNATLEGHENEVKSVTWSKN-GQFLATCSRDKSVWVWEV 163 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~l~~~~~-~~~l~~~~~dg~i~vwd~ 163 (479)
..+|.+.|++|+|+|++++|++|+.||+|+|||++++.. .......+|..+|.+++|+|+ +.+|++|+.||.|++|++
T Consensus 7 ~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~ 86 (342)
T d1yfqa_ 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred CCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeec
Confidence 478999999999999999999999999999999876532 223334469999999999986 458999999999999999
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCC--CccEEEEEEccCCCEEE
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSH--TSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~ 241 (479)
........ ....+........+.++...+++++.++.+++||++..............+ ........+.+.+..++
T Consensus 87 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (342)
T d1yfqa_ 87 IGSPSFQA--LTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLI 164 (342)
T ss_dssp SSSSSEEE--CBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEE
T ss_pred cccccccc--ccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCcee
Confidence 88743222 122233334455666788999999999999999998765443334333333 23345567778889999
Q ss_pred EeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEe-cCCCCeEEEEeCCCeEEEcccCCCCCCCC
Q psy14815 242 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW-CHLTDLIATACGDDAIRIFKENPEAGDSD 320 (479)
Q Consensus 242 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~-~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 320 (479)
+++.|+.|++||+........ ....... ...+.+..+ ..++..+++++.||.+.+|+.........
T Consensus 165 ~~~~d~~i~~~~~~~~~~~~~------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~ 231 (342)
T d1yfqa_ 165 VGMNNSQVQWFRLPLCEDDNG------------TIEESGL-KYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYN 231 (342)
T ss_dssp EEESTTEEEEEESSCCTTCCC------------EEEECSC-SSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTT
T ss_pred eecCCCcEEEEecccCcccce------------eeeeccc-ccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceee
Confidence 999999999999866544321 1222222 334445444 45677899999999999999876543222
Q ss_pred ceeeEEE-----eccccccccceeEEEecCCCCCCCccc
Q psy14815 321 MVSFDLV-----HTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 321 ~~~~~~~-----~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
....... ......|...|++++|+|++++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~ 270 (342)
T d1yfqa_ 232 SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG 270 (342)
T ss_dssp CTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEE
T ss_pred ccccceeeeeeeccCCCcccccceeEEecCCccEEEEEC
Confidence 1111111 112245677899999999999997664
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.91 E-value=1.5e-22 Score=193.42 Aligned_cols=315 Identities=9% Similarity=0.009 Sum_probs=209.8
Q ss_pred EEECCCCC--eEEEeeCCCcEEEEecccccccccccCC---------CccceEEEeecCCcEEEecCCCCCCceeeeEEe
Q psy14815 17 VSWNPQGT--MISSCGEDKNIRLWVMVIREPYEKLHGL---------PVETSLRQLVEDKNIRLWGKESFGNKFTAKAIL 85 (479)
Q Consensus 17 l~~s~~~~--~l~t~~~dg~v~iwd~~~~~~~~~~~~~---------~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 85 (479)
..++.|.+ ++++.+.||+|+|||+.+++.+.++..+ |++..+++++.|+++++||+.............
T Consensus 24 ~~~~~d~~~~~~V~~~~dg~v~vwD~~t~~~~~~l~~g~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~ 103 (426)
T d1hzua2 24 QLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI 103 (426)
T ss_dssp CCSCCCGGGEEEEEETTTTEEEEEETTTCSEEEEEECCSSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC
T ss_pred ccccCCCCeEEEEEEcCCCEEEEEECCCCcEEEEEeCCCCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeC
Confidence 34555533 5678889999999999999988877643 677888888899999999998655444333333
Q ss_pred ccccCCcEEEEEECCCCCEEEEE-ECCCeEEEEECCCCeEEEeEEEeCCCC-----------cEEEEEEcCCCCEEEEEe
Q psy14815 86 SDGHQRTIRETAWSPCGNFIASA-SFDATTAVWDKRSGQFECNATLEGHEN-----------EVKSVTWSKNGQFLATCS 153 (479)
Q Consensus 86 ~~~~~~~v~~v~~~~~~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~~~~~~-----------~v~~l~~~~~~~~l~~~~ 153 (479)
..+|...+.+++|+|||++++++ ..++.+++||..++. .......+.. ....+.+++++..++...
T Consensus 104 ~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~ 181 (426)
T d1hzua2 104 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE--PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV 181 (426)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC--EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred CCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccc--eeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEec
Confidence 45677778888999999987554 578999999999986 3444444433 344555666666555544
Q ss_pred C-CCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc-CCcEEEEecCCcccceEeeeeecCCCccEEEE
Q psy14815 154 R-DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWINFATLKSHTSTVWSL 231 (479)
Q Consensus 154 ~-dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~ 231 (479)
. .+.+.+++....... ......+...+..+.|+|++++++++.. +..+.+++...+... .......+.......
T Consensus 182 ~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 257 (426)
T d1hzua2 182 KETGKVLLVNYKDIDNL--TVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLS--ALVDVGKTPHPGRGA 257 (426)
T ss_dssp TTTTEEEEEECSSSSSC--EEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEE--EEEECSSCCCCSCCE
T ss_pred CCCCeEEEEEeccccce--eeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEE--EEeccCCccccccee
Confidence 3 344555555443221 2223356677889999999998887764 556889998876541 112222222222333
Q ss_pred EEccCCC-E--EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEE-------E
Q psy14815 232 AFDRIGS-R--LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT-------A 301 (479)
Q Consensus 232 ~~~~~~~-~--l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~-------~ 301 (479)
.+...+. . .++.+.|+.+.+|+....... ...++...++.+| ...+..++|+|++++|++ +
T Consensus 258 ~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~--------~~~~~~~~~l~g~-~~~v~~v~~sPdg~~l~v~~~~~~s~ 328 (426)
T d1hzua2 258 NFVHPKYGPVWSTSHLGDGSISLIGTDPKNHP--------QYAWKKVAELQGQ-GGGSLFIKTHPKSSHLYVDTTFNPDA 328 (426)
T ss_dssp EEEETTTEEEEEEECTTTCEEEEEECCTTTCT--------TTBTSEEEEEECS-SSCCCCEECCTTCSEEEECCTTCSSH
T ss_pred eeecCCCCceEEeccCCCceEEEeeccccccc--------cccceEeEEEecC-CCceeEEEcCCCCceEEEeecCCCCc
Confidence 3333332 2 234456888989987544321 2445778889997 888999999999999995 4
Q ss_pred eCCCeEEEcccCCCCCCCCceeeEEEe----ccccccccceeEEEecCCCCCCC
Q psy14815 302 CGDDAIRIFKENPEAGDSDMVSFDLVH----TEHRAHNQDVNCVAWNPVVPEPQ 351 (479)
Q Consensus 302 ~~dg~i~vw~~~~~~~~~~~~~~~~~~----~~~~~h~~~v~~~~~sp~~~~l~ 351 (479)
+.|++|+|||+.+++... .+.. .....|...|.+++|||||+++.
T Consensus 329 ~~~~tv~vwd~~t~~~~~-----~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~ 377 (426)
T d1hzua2 329 RISQSVAVFDLKNLDAKY-----QVLPIAEWADLGEGAKRVVQPEYNKRGDEVW 377 (426)
T ss_dssp HHHTCEEEEETTCTTSCC-----EEECHHHHHCCCSSCCCEEEEEECSSSSEEE
T ss_pred ccCCEEEEEECCCCCcCe-----EEeccchhcccCCCCccEEEEEECCCCCEEE
Confidence 568899999999876211 1110 01234566799999999999763
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.89 E-value=2.1e-22 Score=192.10 Aligned_cols=312 Identities=10% Similarity=0.003 Sum_probs=200.1
Q ss_pred CCCeEEEeeCCCcEEEEecccccccccccCC---------CccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCc
Q psy14815 22 QGTMISSCGEDKNIRLWVMVIREPYEKLHGL---------PVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRT 92 (479)
Q Consensus 22 ~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~---------~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 92 (479)
+.-++++.+.||+|.|||..+++.+..+... |++..+++++.|+.+.+||+...............+|...
T Consensus 31 ~~~~~v~~~d~g~v~v~D~~t~~v~~~~~~g~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~ 110 (432)
T d1qksa2 31 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSI 110 (432)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEE
T ss_pred CcEEEEEEcCCCEEEEEECCCCcEEEEEeCCCCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCe
Confidence 3334688999999999999999988877543 6778888888999999999986544433333333456677
Q ss_pred EEEEEECCCCCEE-EEEECCCeEEEEECCCCeEEEeEEEeC-----------CCCcEEEEEEcCCCCEEE-EEeCCCcEE
Q psy14815 93 IRETAWSPCGNFI-ASASFDATTAVWDKRSGQFECNATLEG-----------HENEVKSVTWSKNGQFLA-TCSRDKSVW 159 (479)
Q Consensus 93 v~~v~~~~~~~~l-~t~~~dg~i~iwd~~~~~~~~~~~~~~-----------~~~~v~~l~~~~~~~~l~-~~~~dg~i~ 159 (479)
+.+..|+|||++| ++++.++.|++||..+++.. ..+.. +......+.+++++..++ +...++.|.
T Consensus 111 ~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~ 188 (432)
T d1qksa2 111 ETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPK--KIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKIL 188 (432)
T ss_dssp EECCSTTCTTTEEEEEEEETTEEEEEETTTCCEE--EEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEE
T ss_pred EEecccCCCCCEEEEEcCCCCeEEEEeCccccce--eeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEE
Confidence 7788889999986 67888999999999998743 33332 345567889999988764 556678999
Q ss_pred EEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEc-CCcEEEEecCCcccceEe-eeeecCCCccEEEEEEccCC
Q psy14815 160 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWIN-FATLKSHTSTVWSLAFDRIG 237 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~ 237 (479)
+||..+.+.... ..+ .+...+..++|+|+|+++++++. ++.+.++|..+....... ......|........+...+
T Consensus 189 ~~d~~~~~~~~~-~~i-~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g 266 (432)
T d1qksa2 189 LVDYTDLNNLKT-TEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFG 266 (432)
T ss_dssp EEETTCSSEEEE-EEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTE
T ss_pred EEEccCCCcceE-EEE-cccCccccceECCCCCEEEEeccccceEEEeecccceEEEEeccCccccccCcccceecCCCC
Confidence 999887643222 222 34456789999999998877775 457888888765431110 00111233334444444444
Q ss_pred CEEEEee-CCCeEEEEeccCCCCCCC-------CCCCC--------CCCceEEEE--EEeccccccEEEEEecCCCCeEE
Q psy14815 238 SRLATCS-DDATVKIWKEYKPGNSAG-------IPTPD--------NDSVWKCVC--TLSGHHGRTIYDISWCHLTDLIA 299 (479)
Q Consensus 238 ~~l~s~~-~dg~i~iwd~~~~~~~~~-------~~~~~--------~~~~~~~~~--~~~~~~~~~i~~l~~~~~~~~l~ 299 (479)
....+.. .++.+.+|+......... +..+. ......+.. .+..+ .....++++ ||++.++
T Consensus 267 ~~~~~~~lg~~~v~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~-~~~~~sv~v-pDg~~la 344 (432)
T d1qksa2 267 PVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPE-AEISGSVAV-FDIKAMT 344 (432)
T ss_dssp EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSS-HHHHTCEEE-EEGGGCC
T ss_pred ceecccccCCceEEecccccccccccccEEEEEEEcCCCCeEEEEecCCccceeecccCCCC-CCeeeEEEE-Eechhhc
Confidence 4443332 366777776544322110 00000 000000000 01111 222334554 8899999
Q ss_pred EEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCc
Q psy14815 300 TACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 300 ~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~ 352 (479)
+++.|+.+++|++..+. .+..|...+.+++|||||+++..
T Consensus 345 ~~s~d~~~k~w~~~~~~-------------~l~~~~~~v~~~~fS~DG~~v~~ 384 (432)
T d1qksa2 345 GDGSDPEFKTLPIAEWA-------------GITEGQPRVVQGEFNKDGTEVWF 384 (432)
T ss_dssp CSSSCCCEEEECHHHHH-------------TCCSSCCEEEEEEECTTSSEEEE
T ss_pred ccccCCceEeccccccc-------------ccCCCCCcEEEeEECCCCCEEEE
Confidence 99999999999875543 12356678999999999998744
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.89 E-value=3.5e-21 Score=183.73 Aligned_cols=305 Identities=10% Similarity=0.034 Sum_probs=198.7
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEeccccccccc--c-------------cCCCccceEE-EeecCC
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEK--L-------------HGLPVETSLR-QLVEDK 65 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~--~-------------~~~~~~~~~~-~~~~~~ 65 (479)
+.++++..|. .+..++|||||++|++++.|++|++||+.+++.... + ...+++..++ ....++
T Consensus 53 ~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~ 131 (426)
T d1hzua2 53 KIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPP 131 (426)
T ss_dssp SEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESS
T ss_pred cEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCCCEEEEeecCCC
Confidence 3567788775 599999999999999999999999999988874322 1 1124566654 445789
Q ss_pred cEEEecCCCCCCceeeeEE------eccccCCcEEEEEECCCCCEEEEEEC-CCeEEEEECCCCeEEEeEEEeCCCCcEE
Q psy14815 66 NIRLWGKESFGNKFTAKAI------LSDGHQRTIRETAWSPCGNFIASASF-DATTAVWDKRSGQFECNATLEGHENEVK 138 (479)
Q Consensus 66 ~i~~w~~~~~~~~~~~~~~------~~~~~~~~v~~v~~~~~~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~ 138 (479)
.+.+||............. ....+......+.+++++..++.... .+.+.+++......... ....+...+.
T Consensus 132 ~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~ 210 (426)
T d1hzua2 132 QFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTV-TSIGAAPFLA 210 (426)
T ss_dssp EEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEE-EEEECCSSEE
T ss_pred eEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEeccccceee-EEeccCCccE
Confidence 9999998853322111100 11234455677788888877766554 46777777766542222 3334677899
Q ss_pred EEEEcCCCCEEEEEeC-CCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCC-EE--EEEEcCCcEEEEecCCcc--
Q psy14815 139 SVTWSKNGQFLATCSR-DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-IL--ASASYDDTVKLFKEDKAE-- 212 (479)
Q Consensus 139 ~l~~~~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l--~~~~~dg~i~i~d~~~~~-- 212 (479)
.+.|+|++++++++.. +..+.+++..+.+..... ....+........+.+.+. .. ++.+.|+.+.+|+.....
T Consensus 211 ~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~ 289 (426)
T d1hzua2 211 DGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALV-DVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHP 289 (426)
T ss_dssp EEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEE-ECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCT
T ss_pred eeeECCCCcEEEeeeecccceeeeecccccEEEEe-ccCCcccccceeeeecCCCCceEEeccCCCceEEEeeccccccc
Confidence 9999999998888765 556889998877432211 1112222233344433332 22 223357778888765432
Q ss_pred -cceEeeeeecCCCccEEEEEEccCCCEEEE-------eeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccc
Q psy14815 213 -ADWINFATLKSHTSTVWSLAFDRIGSRLAT-------CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR 284 (479)
Q Consensus 213 -~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-------~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (479)
..+.....+.+|...+..++|+|++++|++ ++.|++|++||+........+... .....+.. +..
T Consensus 290 ~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~------~~~~~~~~-~~~ 362 (426)
T d1hzua2 290 QYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPI------AEWADLGE-GAK 362 (426)
T ss_dssp TTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECH------HHHHCCCS-SCC
T ss_pred cccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEecc------chhcccCC-CCc
Confidence 123456778899999999999999999994 556889999998766543210000 00001112 255
Q ss_pred cEEEEEecCCCCeEEEE-----eCCCeEEEcccCCCC
Q psy14815 285 TIYDISWCHLTDLIATA-----CGDDAIRIFKENPEA 316 (479)
Q Consensus 285 ~i~~l~~~~~~~~l~~~-----~~dg~i~vw~~~~~~ 316 (479)
.+.+++|+|||++++.+ +.+|.|+|||.++.+
T Consensus 363 rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k 399 (426)
T d1hzua2 363 RVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 399 (426)
T ss_dssp CEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTE
T ss_pred cEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCe
Confidence 79999999999977443 357899999999987
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.89 E-value=3.1e-22 Score=190.89 Aligned_cols=286 Identities=9% Similarity=-0.001 Sum_probs=179.9
Q ss_pred cccccccccccceEEEEECCCCCeEEEeeCCCcEEEEeccccccc--cccc-------------CCCccceE-EEeecCC
Q psy14815 2 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPY--EKLH-------------GLPVETSL-RQLVEDK 65 (479)
Q Consensus 2 ~~~~~l~~h~~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~--~~~~-------------~~~~~~~~-~~~~~~~ 65 (479)
+.++++..|. .+..++|||||+++++++.||+|++||+.+++.. ..+. ..+++..+ ++...++
T Consensus 53 ~v~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~ 131 (432)
T d1qksa2 53 EIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPP 131 (432)
T ss_dssp CEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETT
T ss_pred cEEEEEeCCC-CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCC
Confidence 4566777664 6999999999999999999999999999876632 1111 12455554 5677899
Q ss_pred cEEEecCCCCCCceeeeEE------eccccCCcEEEEEECCCCCEEE-EEECCCeEEEEECCCCeEEEeEEEeCCCCcEE
Q psy14815 66 NIRLWGKESFGNKFTAKAI------LSDGHQRTIRETAWSPCGNFIA-SASFDATTAVWDKRSGQFECNATLEGHENEVK 138 (479)
Q Consensus 66 ~i~~w~~~~~~~~~~~~~~------~~~~~~~~v~~v~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~ 138 (479)
.+.+||............. ....+......+.++|++..++ +...++.|.+||..+.+...+..+. +...+.
T Consensus 132 ~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~-~g~~~~ 210 (432)
T d1qksa2 132 QYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS-AERFLH 210 (432)
T ss_dssp EEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE-CCSSEE
T ss_pred eEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEc-ccCccc
Confidence 9999998854322211110 1123566778899999998764 5566799999999887644444544 456789
Q ss_pred EEEEcCCCCEEEEEeCC-CcEEEEEeCCCCceeeeeee--eccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccc
Q psy14815 139 SVTWSKNGQFLATCSRD-KSVWVWEVGEEDEYECAAVI--NAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEAD 214 (479)
Q Consensus 139 ~l~~~~~~~~l~~~~~d-g~i~vwd~~~~~~~~~~~~~--~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~ 214 (479)
.+.|+|+|+++++++.+ +.+.++|....+.......- ..|........+...+....+.. .++.|.+|+......
T Consensus 211 ~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~~- 289 (432)
T d1qksa2 211 DGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGH- 289 (432)
T ss_dssp EEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTC-
T ss_pred cceECCCCCEEEEeccccceEEEeecccceEEEEeccCccccccCcccceecCCCCceecccccCCceEEecccccccc-
Confidence 99999999988888764 46888888765322211111 11222233333333333333322 256677776544331
Q ss_pred eEeeeeecCCCccEEEEEEcc-----------------------------------CCCEEEEeeCCCeEEEEeccCCCC
Q psy14815 215 WINFATLKSHTSTVWSLAFDR-----------------------------------IGSRLATCSDDATVKIWKEYKPGN 259 (479)
Q Consensus 215 ~~~~~~~~~~~~~v~~~~~~~-----------------------------------~~~~l~s~~~dg~i~iwd~~~~~~ 259 (479)
..|...+....++| |++.+++++.|+.+++|++....
T Consensus 290 -------~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~~~~sv~vpDg~~la~~s~d~~~k~w~~~~~~- 361 (432)
T d1qksa2 290 -------PDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWA- 361 (432)
T ss_dssp -------TTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHH-
T ss_pred -------cccccEEEEEEEcCCCCeEEEEecCCccceeecccCCCCCCeeeEEEEEechhhcccccCCceEeccccccc-
Confidence 12333344444444 44445555555555555442111
Q ss_pred CCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEe-----CCCeEEEcccCCCC
Q psy14815 260 SAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-----GDDAIRIFKENPEA 316 (479)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~-----~dg~i~vw~~~~~~ 316 (479)
.+..| ...+.+++|+|||++++.+. .+|.|.|||..+.+
T Consensus 362 -----------------~l~~~-~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~k 405 (432)
T d1qksa2 362 -----------------GITEG-QPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLE 405 (432)
T ss_dssp -----------------TCCSS-CCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred -----------------ccCCC-CCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEECCCce
Confidence 11223 45788999999999886654 46889999999987
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.87 E-value=3.6e-19 Score=160.75 Aligned_cols=255 Identities=14% Similarity=0.103 Sum_probs=182.8
Q ss_pred EEeeCCCcEEEEecccccccccccC---------CCccceE-EEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEE
Q psy14815 27 SSCGEDKNIRLWVMVIREPYEKLHG---------LPVETSL-RQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 96 (479)
Q Consensus 27 ~t~~~dg~v~iwd~~~~~~~~~~~~---------~~~~~~~-~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v 96 (479)
++++.|++|.+||+++++.+.++.. .+++..+ ++...++.|.+||+.+... .. . .. ....+..+
T Consensus 6 V~~~~~~~v~v~D~~t~~~~~~i~~g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~--~~--~-~~-~~~~~~~~ 79 (301)
T d1l0qa2 6 IANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNV--IA--T-VP-AGSSPQGV 79 (301)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEE--EE--E-EE-CSSSEEEE
T ss_pred EEECCCCEEEEEECCCCeEEEEEECCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCce--ee--e-ee-cccccccc
Confidence 4567889999999999887776543 2455555 4556778999999874221 11 1 12 23457899
Q ss_pred EECCCCCEEEE-EECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEE-eCCCcEEEEEeCCCCceeeeee
Q psy14815 97 AWSPCGNFIAS-ASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC-SRDKSVWVWEVGEEDEYECAAV 174 (479)
Q Consensus 97 ~~~~~~~~l~t-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~ 174 (479)
+|++++..+++ +..++.+.+|+..+++ ....+.. .....++.|+|++..++.+ ..++.+.+|+..+. .....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~---~~~~~ 153 (301)
T d1l0qa2 80 AVSPDGKQVYVTNMASSTLSVIDTTSNT--VAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTK---AVINT 153 (301)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTE--EEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT---EEEEE
T ss_pred ccccccccccccccccceeeecccccce--eeeeccc-cccceEEEeecCCCeeeeeeccccceeeeecccc---ceeee
Confidence 99999986655 4567799999999986 4455554 4567899999999877554 55788999999887 33333
Q ss_pred eeccccceeEEEEecCCCEEEEEEcC-CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEee---CCCeEE
Q psy14815 175 INAHIQDVKKVRFHPFDNILASASYD-DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS---DDATVK 250 (479)
Q Consensus 175 ~~~~~~~v~~l~~~~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~---~dg~i~ 250 (479)
+.. ...+..+.++|+++.+++++.+ +.+.+|+...... ..... ....+..++|+++++.++.++ .++.|+
T Consensus 154 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~ 227 (301)
T d1l0qa2 154 VSV-GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV----IDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVS 227 (301)
T ss_dssp EEC-CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE----EEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEE
T ss_pred ccc-CCCceEEEeeccccceeeecccccccccccccceee----eeccc-ccCCcceeeccccccccccccccceeeeee
Confidence 433 3457889999999988888765 5566777665432 22332 345577899999999887654 346899
Q ss_pred EEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeE-EEEeCCCeEEEcccCCCC
Q psy14815 251 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACGDDAIRIFKENPEA 316 (479)
Q Consensus 251 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l-~~~~~dg~i~vw~~~~~~ 316 (479)
+||+.. .+.+..+.. ...+.+++|+|||++| ++++.|+.|++||+++++
T Consensus 228 v~D~~t---------------~~~~~~~~~--~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~ 277 (301)
T d1l0qa2 228 MIDTGT---------------NKITARIPV--GPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNT 277 (301)
T ss_dssp EEETTT---------------TEEEEEEEC--CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred eeecCC---------------CeEEEEEcC--CCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCe
Confidence 999843 355556554 3468999999999976 567789999999999987
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.86 E-value=9.4e-20 Score=167.34 Aligned_cols=262 Identities=9% Similarity=0.047 Sum_probs=181.6
Q ss_pred CeEEEeeCCCcEEEEecccccccccccCC------------CccceEE-EeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 24 TMISSCGEDKNIRLWVMVIREPYEKLHGL------------PVETSLR-QLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 24 ~~l~t~~~dg~v~iwd~~~~~~~~~~~~~------------~~~~~~~-~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
+|+++++.|++|++||+++++.+..+... +++..++ +...++.|.+||+.+..............+.
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~ 81 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccc
Confidence 58999999999999999999887766431 4455554 4457889999999853322222211122233
Q ss_pred CcEEEEEECCCCCEEEEEE------------CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcE
Q psy14815 91 RTIRETAWSPCGNFIASAS------------FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 158 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i 158 (479)
..+..++|+|++++++++. .++.+.+||..+++ ....+.. ...+.+++|+|+|+++++++. .+
T Consensus 82 ~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~-~~~~~~~~~s~dg~~l~~~~~--~~ 156 (337)
T d1pbyb_ 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS--RRKAFEA-PRQITMLAWARDGSKLYGLGR--DL 156 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE--EEEEEEC-CSSCCCEEECTTSSCEEEESS--SE
T ss_pred cceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCe--EEEeccc-cCCceEEEEcCCCCEEEEEcC--Cc
Confidence 4556799999999998876 35789999999986 4455553 456889999999999999864 47
Q ss_pred EEEEeCCCCceeeeeeeeccccceeEEEEec------------------------CCCEEEEEEcCCcEEEEecCCcccc
Q psy14815 159 WVWEVGEEDEYECAAVINAHIQDVKKVRFHP------------------------FDNILASASYDDTVKLFKEDKAEAD 214 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~------------------------~~~~l~~~~~dg~i~i~d~~~~~~~ 214 (479)
.+||..+.+ ....+..+... ....+.| +......+..++.+.+|+...+..
T Consensus 157 ~~~d~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 231 (337)
T d1pbyb_ 157 HVMDPEAGT---LVEDKPIQSWE-AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM- 231 (337)
T ss_dssp EEEETTTTE---EEEEECSTTTT-TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE-
T ss_pred ceeeeecCc---EEEEeecCCcc-ccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcE-
Confidence 789988763 22222211110 0111111 111122223345688899887653
Q ss_pred eEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCC
Q psy14815 215 WINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL 294 (479)
Q Consensus 215 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~ 294 (479)
.......+...+..+.+++++.+++.+ ++.|++||+... +.+..+.. ...+.+++|+||
T Consensus 232 --~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~---------------~~~~~~~~--~~~~~~~~~s~d 290 (337)
T d1pbyb_ 232 --AMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN---------------ASIKRVPL--PHSYYSVNVSTD 290 (337)
T ss_dssp --EEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT---------------EEEEEEEC--SSCCCEEEECTT
T ss_pred --EEEEecCCCcceEEEEecccceEEEEc--cccEEEEECCCC---------------cEEEEEcC--CCCEEEEEECCC
Confidence 233455677788899999999988766 588999998443 55555543 457899999999
Q ss_pred CCeEEEEeCCCeEEEcccCCCC
Q psy14815 295 TDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 295 ~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
|++|++++.|+.|++||..+.+
T Consensus 291 G~~l~v~~~~~~i~v~D~~t~~ 312 (337)
T d1pbyb_ 291 GSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp SCEEEEESBSSEEEEEETTTCC
T ss_pred CCEEEEEeCCCcEEEEECCCCc
Confidence 9999999999999999999987
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.85 E-value=1.6e-19 Score=166.52 Aligned_cols=237 Identities=7% Similarity=-0.023 Sum_probs=163.7
Q ss_pred EEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEE
Q psy14815 17 VSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 96 (479)
Q Consensus 17 l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v 96 (479)
++|++++++|++++.|++|.+||+.+++.+.++. ..+...+.++
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~------------------------------------~~~~~~p~~l 45 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCV------------------------------------MPDKFGPGTA 45 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEE------------------------------------CSSCCSSCEE
T ss_pred ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEE------------------------------------cCCCCCcceE
Confidence 4789999999999999999999999887765542 2345567899
Q ss_pred EECCCCCEEE-EEECCCeEEEEECCCCeEEEeEEEeCCC------CcEEEEEEcCCCCEEEEEe------------CCCc
Q psy14815 97 AWSPCGNFIA-SASFDATTAVWDKRSGQFECNATLEGHE------NEVKSVTWSKNGQFLATCS------------RDKS 157 (479)
Q Consensus 97 ~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~------~~v~~l~~~~~~~~l~~~~------------~dg~ 157 (479)
+|+|||++++ ++..++.|.+||+.+++. ...+.... ..+..++|+|||+++++++ .++.
T Consensus 46 ~~spDG~~l~v~~~~~~~v~~~d~~t~~~--~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~ 123 (346)
T d1jmxb_ 46 MMAPDNRTAYVLNNHYGDIYGIDLDTCKN--TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPR 123 (346)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEE--EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCE
T ss_pred EECCCCCEEEEEECCCCcEEEEeCccCee--eeeecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcce
Confidence 9999999875 555789999999999973 33333221 2356889999999988775 3677
Q ss_pred EEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEec-----------------------------
Q psy14815 158 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE----------------------------- 208 (479)
Q Consensus 158 i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~----------------------------- 208 (479)
+.+||..++.....+.... ....+..+.+++++..++++ +.+.+|+.
T Consensus 124 i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (346)
T d1jmxb_ 124 LEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGSLYVAG---PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWP 199 (346)
T ss_dssp EEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSCEEEES---SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCC
T ss_pred EEEEecccceeeeEEEeee-ccCceEEEEecCCCEEEEeC---CcceEEEccCCCEEEEEecCCCccceEEeccccEEEE
Confidence 8889887654322222111 12223344444444433321 23444443
Q ss_pred --------------------------------------CCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEE
Q psy14815 209 --------------------------------------DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 250 (479)
Q Consensus 209 --------------------------------------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 250 (479)
.++.. .......+...+..+.+++++.+++... ++.|.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~ 275 (346)
T d1jmxb_ 200 HQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKT---HTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLA 275 (346)
T ss_dssp CCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCE---EEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEE
T ss_pred EecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCce---EEEEeecccceeEEEEEeCCCCEEEEec-CCeEE
Confidence 32221 1222334666777888888888887765 45799
Q ss_pred EEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 251 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 251 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+||... .+.+..+.. ...+.+++|+|||++|++++.|+.|++||.++.+
T Consensus 276 v~d~~~---------------~~~~~~~~~--~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~ 324 (346)
T d1jmxb_ 276 KYDLKQ---------------RKLIKAANL--DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 324 (346)
T ss_dssp EEETTT---------------TEEEEEEEC--SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred EEECCC---------------CcEEEEEcC--CCCEEEEEEcCCCCEEEEEeCCCcEEEEECccCC
Confidence 999743 355555553 4578999999999999999999999999999987
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.82 E-value=1.5e-17 Score=149.87 Aligned_cols=228 Identities=12% Similarity=0.068 Sum_probs=163.6
Q ss_pred cceEEEEECCCCCeEE-EeeCCCcEEEEecccccccccccCCC---------ccc-eEEEeecCCcEEEecCCCCCCcee
Q psy14815 12 GRVWNVSWNPQGTMIS-SCGEDKNIRLWVMVIREPYEKLHGLP---------VET-SLRQLVEDKNIRLWGKESFGNKFT 80 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~-t~~~dg~v~iwd~~~~~~~~~~~~~~---------~~~-~~~~~~~~~~i~~w~~~~~~~~~~ 80 (479)
..+..++|+|||++|+ +++.++.|++||+.+++.+..+..+. ++. .++....+..+.+|+..... .
T Consensus 32 ~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~- 108 (301)
T d1l0qa2 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNT--V- 108 (301)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE--E-
T ss_pred CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeeccccccccccccccccccccccccceeeecccccce--e-
Confidence 4578999999999874 66688999999999998887765542 233 23334456678888877321 1
Q ss_pred eeEEeccccCCcEEEEEECCCCCEEEE-EECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-CcE
Q psy14815 81 AKAILSDGHQRTIRETAWSPCGNFIAS-ASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-KSV 158 (479)
Q Consensus 81 ~~~~~~~~~~~~v~~v~~~~~~~~l~t-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-g~i 158 (479)
.....+.....++.|+|++..++. +..++.+.+|+..+++ ....+.. ...+..+.+++++..+++++.+ +.+
T Consensus 109 ---~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (301)
T d1l0qa2 109 ---AGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKA--VINTVSV-GRSPKGIAVTPDGTKVYVANFDSMSI 182 (301)
T ss_dssp ---EEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE--EEEEEEC-CSSEEEEEECTTSSEEEEEETTTTEE
T ss_pred ---eeeccccccceEEEeecCCCeeeeeeccccceeeeeccccc--eeeeccc-CCCceEEEeeccccceeeeccccccc
Confidence 111235567889999999988755 4557899999999986 4445553 3567899999999988888776 456
Q ss_pred EEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcC---CcEEEEecCCcccceEeeeeecCCCccEEEEEEcc
Q psy14815 159 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD---DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR 235 (479)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 235 (479)
.+|+.... ....... .......++|+++++.++.++.+ +.|.+||..+++. ...+.. ...+.+++|+|
T Consensus 183 ~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~----~~~~~~-~~~~~~va~sp 253 (301)
T d1l0qa2 183 SVIDTVTN---SVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKI----TARIPV-GPDPAGIAVTP 253 (301)
T ss_dssp EEEETTTT---EEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEE----EEEEEC-CSSEEEEEECT
T ss_pred ccccccce---eeeeccc-ccCCcceeeccccccccccccccceeeeeeeeecCCCeE----EEEEcC-CCCEEEEEEeC
Confidence 66666554 3333333 33456789999999888766543 6799999987653 444443 35679999999
Q ss_pred CCCEE-EEeeCCCeEEEEeccCC
Q psy14815 236 IGSRL-ATCSDDATVKIWKEYKP 257 (479)
Q Consensus 236 ~~~~l-~s~~~dg~i~iwd~~~~ 257 (479)
+|++| ++++.|+.|++||+.+.
T Consensus 254 dg~~l~va~~~~~~i~v~D~~t~ 276 (301)
T d1l0qa2 254 DGKKVYVALSFCNTVSVIDTATN 276 (301)
T ss_dssp TSSEEEEEETTTTEEEEEETTTT
T ss_pred CCCEEEEEECCCCeEEEEECCCC
Confidence 99987 57778999999998443
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.82 E-value=2.6e-17 Score=150.73 Aligned_cols=259 Identities=11% Similarity=0.115 Sum_probs=178.6
Q ss_pred ccccceEEEEECCCCCeEEEee-CCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEecc
Q psy14815 9 GHQGRVWNVSWNPQGTMISSCG-EDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSD 87 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~ 87 (479)
.|.+.|.+|+|+|||++|++++ .|+.|++|++........+ ....
T Consensus 34 ~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~----------------------------------~~~~ 79 (333)
T d1ri6a_ 34 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTF----------------------------------AAES 79 (333)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE----------------------------------EEEE
T ss_pred cCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEE----------------------------------eeec
Confidence 5889999999999999986554 5899999998754432211 0112
Q ss_pred ccCCcEEEEEECCCCCEEEEEEC-CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-CCcEEEEEeCC
Q psy14815 88 GHQRTIRETAWSPCGNFIASASF-DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DKSVWVWEVGE 165 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~i~vwd~~~ 165 (479)
.+...+..++|+|||++|++++. ++.+.+|+..............+...+.++.++|+++++++++. +..+.+|+...
T Consensus 80 ~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~ 159 (333)
T d1ri6a_ 80 ALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSD 159 (333)
T ss_dssp ECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred ccCCCceEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEecc
Confidence 34456678999999999999885 67899999887765555666677788899999999998888875 45699999887
Q ss_pred CCceeeee---eeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccceEeeeee------cCCCccEEEEEEcc
Q psy14815 166 EDEYECAA---VINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWINFATL------KSHTSTVWSLAFDR 235 (479)
Q Consensus 166 ~~~~~~~~---~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~------~~~~~~v~~~~~~~ 235 (479)
........ ...........++|++++..++... ..+...+++.............. .........+++++
T Consensus 160 ~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 239 (333)
T d1ri6a_ 160 DGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITP 239 (333)
T ss_dssp TSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECT
T ss_pred CCcceeeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEec
Confidence 64322211 1122334567899999988776655 45677888875443322222221 12334567889999
Q ss_pred CCCEEEEe-eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeC-CCeEEEcccC
Q psy14815 236 IGSRLATC-SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-DDAIRIFKEN 313 (479)
Q Consensus 236 ~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~-dg~i~vw~~~ 313 (479)
++++++.. ..++.+.+|++...... ......... ...+.+++|+|||++|++++. ++.|++|+++
T Consensus 240 d~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~-~~~p~~~a~spDGk~l~va~~~~~~v~v~~id 306 (333)
T d1ri6a_ 240 DGRHLYACDRTASLITVFSVSEDGSV------------LSKEGFQPT-ETQPRGFNVDHSGKYLIAAGQKSHHISVYEIV 306 (333)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTSCC------------EEEEEEEEC-SSSCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred ccCceeeecccCCeEEEEEEcCCCCE------------EEEEEEeCC-CCCeeEEEEeCCCCEEEEEECCCCeEEEEEEE
Confidence 99877654 56788999998554322 112222222 456788999999998777654 6899999664
Q ss_pred C
Q psy14815 314 P 314 (479)
Q Consensus 314 ~ 314 (479)
.
T Consensus 307 ~ 307 (333)
T d1ri6a_ 307 G 307 (333)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.78 E-value=1.2e-16 Score=146.21 Aligned_cols=248 Identities=11% Similarity=0.062 Sum_probs=164.4
Q ss_pred ccCCcEEEEEECCCCCEEEEEE-CCCeEEEEECCCCeEEE-eEEEeCCCCcEEEEEEcCCCCEEEEEeC-CCcEEEEEeC
Q psy14815 88 GHQRTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQFEC-NATLEGHENEVKSVTWSKNGQFLATCSR-DKSVWVWEVG 164 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~~~~~~-~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~i~vwd~~ 164 (479)
.|...+..++|+|||++|++++ .|+.|++|++....... ......+...+..++|+|||++|++++. ++.+.+|+..
T Consensus 34 ~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~ 113 (333)
T d1ri6a_ 34 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLE 113 (333)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCceEEEEcCCCCEEeecccCCCceeeeccc
Confidence 5778899999999999996655 48999999987653221 1122234456778999999999999885 6689999987
Q ss_pred CCCceeeeeeeeccccceeEEEEecCCCEEEEEEc-CCcEEEEecCCcccceEee--eeecCCCccEEEEEEccCCCEEE
Q psy14815 165 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWINF--ATLKSHTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 165 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~ 241 (479)
..... .......+...+.++.++|+++++++++. +..|.+|+........... ............++|++++..++
T Consensus 114 ~~~~~-~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~ 192 (333)
T d1ri6a_ 114 DGLPV-GVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAY 192 (333)
T ss_dssp TTEEE-EEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEE
T ss_pred cccce-ecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcceeeeceeeeeecCCCccEEEEeccceeEE
Confidence 76432 22334455667889999999998888774 4569999987654321111 11223445678899999998876
Q ss_pred Eee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEec-----cccccEEEEEecCCCCeEEEE-eCCCeEEEcccCC
Q psy14815 242 TCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-----HHGRTIYDISWCHLTDLIATA-CGDDAIRIFKENP 314 (479)
Q Consensus 242 s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~l~~~~~~~~l~~~-~~dg~i~vw~~~~ 314 (479)
... ..+...+|+....... ......... ........+++++++++++.. ..++.+.+|++..
T Consensus 193 ~~~~~~~~~~v~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~ 261 (333)
T d1ri6a_ 193 CVNELNSSVDVWELKDPHGN-----------IECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSE 261 (333)
T ss_dssp EEETTTTEEEEEESSCTTSC-----------CEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred eeccccCceEEEeecccccc-----------eeeeeeeeeeecCCCccccceeEEEecccCceeeecccCCeEEEEEEcC
Confidence 554 5567888886433221 111122111 123456778999999866554 5578999999876
Q ss_pred CCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 315 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
.... ...... ......+.+++|||||++|..+.
T Consensus 262 ~~~~-----~~~~~~--~~~~~~p~~~a~spDGk~l~va~ 294 (333)
T d1ri6a_ 262 DGSV-----LSKEGF--QPTETQPRGFNVDHSGKYLIAAG 294 (333)
T ss_dssp TSCC-----EEEEEE--EECSSSCCCEEECTTSSEEEEEC
T ss_pred CCCE-----EEEEEE--eCCCCCeeEEEEeCCCCEEEEEE
Confidence 5411 111111 12345678899999999886554
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.78 E-value=9.1e-18 Score=153.83 Aligned_cols=232 Identities=10% Similarity=0.038 Sum_probs=156.6
Q ss_pred CEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEE-EEeCCCcEEEEEeCCCCceeeeeee--eccc
Q psy14815 103 NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSVWVWEVGEEDEYECAAVI--NAHI 179 (479)
Q Consensus 103 ~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~--~~~~ 179 (479)
+++++++.|++|.+||+.+++.........+...+.+++|+|||++++ +++.++.|.+||+.+++........ ..+.
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~ 81 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccc
Confidence 589999999999999999997433333334456688999999999875 5667999999999988433222111 1123
Q ss_pred cceeEEEEecCCCEEEEEEc------------CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCC
Q psy14815 180 QDVKKVRFHPFDNILASASY------------DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 247 (479)
Q Consensus 180 ~~v~~l~~~~~~~~l~~~~~------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 247 (479)
..+..++|+|++++++++.. +..+.+||..+... ...+. +...+..++|+|+|+++++++.+
T Consensus 82 ~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~~-~~~~~~~~~~s~dg~~l~~~~~~- 155 (337)
T d1pbyb_ 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR----RKAFE-APRQITMLAWARDGSKLYGLGRD- 155 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE----EEEEE-CCSSCCCEEECTTSSCEEEESSS-
T ss_pred cceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeE----EEecc-ccCCceEEEEcCCCCEEEEEcCC-
Confidence 34568999999999988764 56788899887653 33333 34557789999999999988754
Q ss_pred eEEEEeccCCCCCCCC-------------------CCCCCCC-------------------------------ceEEEEE
Q psy14815 248 TVKIWKEYKPGNSAGI-------------------PTPDNDS-------------------------------VWKCVCT 277 (479)
Q Consensus 248 ~i~iwd~~~~~~~~~~-------------------~~~~~~~-------------------------------~~~~~~~ 277 (479)
+.+||.........+ ....... .+.....
T Consensus 156 -~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (337)
T d1pbyb_ 156 -LHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR 234 (337)
T ss_dssp -EEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEE
T ss_pred -cceeeeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEE
Confidence 677886543211000 0000000 0011111
Q ss_pred EeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCccc
Q psy14815 278 LSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 278 ~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
...++...+..+.++|++.+++.+ ++.|++||+.+++ ++... .+...+.+++|+|||++|+.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~---------~~~~~--~~~~~~~~~~~s~dG~~l~v~~ 298 (337)
T d1pbyb_ 235 EVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNA---------SIKRV--PLPHSYYSVNVSTDGSTVWLGG 298 (337)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTE---------EEEEE--ECSSCCCEEEECTTSCEEEEES
T ss_pred EecCCCcceEEEEecccceEEEEc--cccEEEEECCCCc---------EEEEE--cCCCCEEEEEECCCCCEEEEEe
Confidence 111235567778888888888765 5899999999987 44444 3456789999999999987654
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.76 E-value=1.8e-15 Score=140.82 Aligned_cols=299 Identities=7% Similarity=-0.052 Sum_probs=191.2
Q ss_pred ccccccceEEEEECCCCCeEEEee-----CCCcEEEEecccccccccccCC--------CccceEEEee----------c
Q psy14815 7 LKGHQGRVWNVSWNPQGTMISSCG-----EDKNIRLWVMVIREPYEKLHGL--------PVETSLRQLV----------E 63 (479)
Q Consensus 7 l~~h~~~V~~l~~s~~~~~l~t~~-----~dg~v~iwd~~~~~~~~~~~~~--------~~~~~~~~~~----------~ 63 (479)
...+.+++.+++++|||+.++... .++.|.+||.++++.+..+... +++..++... .
T Consensus 16 ~~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~~~a~SpDG~~l~va~~~~~~~~~~~~ 95 (373)
T d2madh_ 16 AGAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKR 95 (373)
T ss_pred cccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCCccEEEcCCCCEEEEEeecCCccccccc
Confidence 346889999999999999987642 3467999999999988776543 4555555543 3
Q ss_pred CCcEEEecCCCCCCceeeeEEeccccC-------CcEEEEEECCCCCEEEEEE--CCCeEEEEECCCCeEEEeEEEeCCC
Q psy14815 64 DKNIRLWGKESFGNKFTAKAILSDGHQ-------RTIRETAWSPCGNFIASAS--FDATTAVWDKRSGQFECNATLEGHE 134 (479)
Q Consensus 64 ~~~i~~w~~~~~~~~~~~~~~~~~~~~-------~~v~~v~~~~~~~~l~t~~--~dg~i~iwd~~~~~~~~~~~~~~~~ 134 (479)
++.+.+||......... . ..+. .....+.|+++++.++... .++.+.+|+....+. .. +.
T Consensus 96 ~~~v~v~D~~t~~~~~~--~---~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~--~~----~~ 164 (373)
T d2madh_ 96 TDYVEVFDPVTFLPIAD--I---ELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSD--DQ----LL 164 (373)
T ss_pred ceEEEEEECCCCcEEEE--E---ecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeE--EE----Ee
Confidence 56799999885332111 1 1111 1224578899888766554 456889999887752 22 22
Q ss_pred CcEEEEEEcCCCCEE-EEEeCCCcEEEEEeCCCCceeeeeee---eccccceeEEEEecCCCEEEEEEcCCcEEEEecCC
Q psy14815 135 NEVKSVTWSKNGQFL-ATCSRDKSVWVWEVGEEDEYECAAVI---NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK 210 (479)
Q Consensus 135 ~~v~~l~~~~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~---~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~ 210 (479)
....++.++|+++.+ ++.+.|+.+.+|+............. .........+.+++++. ++..+.++.+.+|+...
T Consensus 165 ~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~ 243 (373)
T d2madh_ 165 SSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGR-IVWPVYSGKILQADISA 243 (373)
T ss_pred ccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCce-EEEecCCceEEEEEcCC
Confidence 345688899988754 67888999999999876432221111 11112233455555554 45566788999999886
Q ss_pred cccceEeeeeecCCC----------ccEEEEEEccCCCEE----------EEeeCCCeEEEEeccCCCCCCCCCCCCCCC
Q psy14815 211 AEADWINFATLKSHT----------STVWSLAFDRIGSRL----------ATCSDDATVKIWKEYKPGNSAGIPTPDNDS 270 (479)
Q Consensus 211 ~~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~l----------~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 270 (479)
.... .......+. .....+++++++..+ ++...++.+.+||....
T Consensus 244 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~------------- 308 (373)
T d2madh_ 244 AGAT--NKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG------------- 308 (373)
T ss_pred CeEE--EEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCC-------------
Confidence 5431 111221111 223345555555543 34455677888887443
Q ss_pred ceEEEEEEeccccccEEEEEecCCCC--eEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCC
Q psy14815 271 VWKCVCTLSGHHGRTIYDISWCHLTD--LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV 346 (479)
Q Consensus 271 ~~~~~~~~~~~~~~~i~~l~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 346 (479)
+.+..+.. ...+..++|+|||+ ++++++.|+.|++||+.+++ .+.. ...+....+.+++.++
T Consensus 309 --~~~~~~~~--~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~---------~~~~-~~~~g~~P~~l~~~~~ 372 (373)
T d2madh_ 309 --QTSSQISL--GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD---------QDQS-TVELGSGPQVLSVMNE 372 (373)
T ss_pred --cEEEEecC--CCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCC---------EEEE-ECCCCCCCcEEEEecC
Confidence 33444443 56789999999998 45678899999999999998 3433 3456666777776554
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.73 E-value=5.2e-16 Score=143.36 Aligned_cols=294 Identities=10% Similarity=0.036 Sum_probs=183.4
Q ss_pred ceEEEEECCCCCeEEEee-----CCCcEEEEecccccccccccC--------CCccceEEEe----------ecCCcEEE
Q psy14815 13 RVWNVSWNPQGTMISSCG-----EDKNIRLWVMVIREPYEKLHG--------LPVETSLRQL----------VEDKNIRL 69 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~-----~dg~v~iwd~~~~~~~~~~~~--------~~~~~~~~~~----------~~~~~i~~ 69 (479)
++.-.+.+||++.++... .+++|.+||..+++.+.++.. .+++..++.. ..++.|.+
T Consensus 3 p~~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v 82 (355)
T d2bbkh_ 3 PRILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEV 82 (355)
T ss_dssp CCBCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred CcEeEeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCCCceEEcCCCCEEEEEeCCCccccccCCCCEEEE
Confidence 344456689999887653 456799999999988776643 2455555543 23678999
Q ss_pred ecCCCCCCceeeeEEeccc----cCCcEEEEEECCCCCEEEEEE--CCCeEEEEECCCCeEEEeEEEeCCCC-------c
Q psy14815 70 WGKESFGNKFTAKAILSDG----HQRTIRETAWSPCGNFIASAS--FDATTAVWDKRSGQFECNATLEGHEN-------E 136 (479)
Q Consensus 70 w~~~~~~~~~~~~~~~~~~----~~~~v~~v~~~~~~~~l~t~~--~dg~i~iwd~~~~~~~~~~~~~~~~~-------~ 136 (479)
||....... ........ .......++|+|++++++.+. .+..+.+|+..+++ ....+..+.. .
T Consensus 83 ~D~~t~~~~--~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 158 (355)
T d2bbkh_ 83 FDPVTLLPT--ADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA--FKRMLDVPDCYHIFPTAP 158 (355)
T ss_dssp ECTTTCCEE--EEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTE--EEEEEECCSEEEEEEEET
T ss_pred EECCCCCEE--EEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCc--EeeEEecCCcceEeecCC
Confidence 999853322 11111111 123345689999999888775 45789999999986 3344443321 1
Q ss_pred EEEEEEcCCCCEEEEEe-CCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccce
Q psy14815 137 VKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 215 (479)
Q Consensus 137 v~~l~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 215 (479)
...+.++++++.++... .++.+.+++..... ..+...+....+.+++..++.++.++.+++|++..+...
T Consensus 159 ~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~- 229 (355)
T d2bbkh_ 159 DTFFMHCRDGSLAKVAFGTEGTPEITHTEVFH--------PEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAK- 229 (355)
T ss_dssp TEEEEEETTSCEEEEECCSSSCCEEEECCCCS--------CTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCE-
T ss_pred cceEEEcCCCCEEEEEecCCCeEEEEeccccc--------ceecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEE-
Confidence 22344555555444332 23334444433321 122334556678888888999999999999999876531
Q ss_pred EeeeeecCC----------CccEEEEEEccCCCEEEEeeCC----------CeEEEEeccCCCCCCCCCCCCCCCceEEE
Q psy14815 216 INFATLKSH----------TSTVWSLAFDRIGSRLATCSDD----------ATVKIWKEYKPGNSAGIPTPDNDSVWKCV 275 (479)
Q Consensus 216 ~~~~~~~~~----------~~~v~~~~~~~~~~~l~s~~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 275 (479)
.+.....+ ......+++++++..++....+ ..|.+||.... +.+
T Consensus 230 -~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~---------------~~~ 293 (355)
T d2bbkh_ 230 -FLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG---------------ERL 293 (355)
T ss_dssp -ECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTC---------------CEE
T ss_pred -EEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCC---------------cEE
Confidence 11111111 1223457888999887765433 36899997543 334
Q ss_pred EEEeccccccEEEEEecCCCC--eEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCC
Q psy14815 276 CTLSGHHGRTIYDISWCHLTD--LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 347 (479)
Q Consensus 276 ~~~~~~~~~~i~~l~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~ 347 (479)
.++.. ...+.+++|+|||+ ++++++.|+.|++||.++++ ++..+ .++......+.+.++|
T Consensus 294 ~~~~~--~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~---------~~~~i-~~~G~~p~~i~~~d~~ 355 (355)
T d2bbkh_ 294 AKFEM--GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE---------ELRSV-NQLGHGPQVITTADMG 355 (355)
T ss_dssp EEEEE--EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCC---------EEEEE-CCCCSSCCEEECCCCC
T ss_pred EEecC--CCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCC---------EEEEE-eCcCCCccEEEeCCCC
Confidence 55543 34688999999998 45667779999999999998 44444 3455555566655543
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.72 E-value=3.9e-16 Score=143.32 Aligned_cols=239 Identities=8% Similarity=0.022 Sum_probs=155.3
Q ss_pred EEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEe-CCCCcEEEEEEcCCCCEEEE-EeCCCcEEEEEeCCCCceeeee
Q psy14815 96 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE-GHENEVKSVTWSKNGQFLAT-CSRDKSVWVWEVGEEDEYECAA 173 (479)
Q Consensus 96 v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~-~~~dg~i~vwd~~~~~~~~~~~ 173 (479)
++|+++++++++++.+++|.+||+.+++ .+..++ .+...+.+++|+|||+++++ ++.++.|.+||+.+.+......
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~--~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~ 79 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVASDT--VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 79 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTE--EEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred ccCCCCCcEEEEEcCCCEEEEEECCCCC--EEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeec
Confidence 4689999999999999999999999997 455554 34566789999999998755 4578999999999874322211
Q ss_pred ee---eccccceeEEEEecCCCEEEEEE------------cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCC
Q psy14815 174 VI---NAHIQDVKKVRFHPFDNILASAS------------YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS 238 (479)
Q Consensus 174 ~~---~~~~~~v~~l~~~~~~~~l~~~~------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 238 (479)
.. ..+...+..++|+|+|+++++++ .++.+.+|+..++.... .+. .......+..+.+++++.
T Consensus 80 ~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~ 157 (346)
T d1jmxb_ 80 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAK-PVR-TFPMPRQVYLMRAADDGS 157 (346)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBC-CSE-EEECCSSCCCEEECTTSC
T ss_pred ccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeee-EEE-eeeccCceEEEEecCCCE
Confidence 11 11223466899999999988775 36778899887665311 111 111223455566777776
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCC----------CCC---------CCC-----------------------------
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIP----------TPD---------NDS----------------------------- 270 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~----------~~~---------~~~----------------------------- 270 (479)
.++++ +.+.+|+.........+. .+. ...
T Consensus 158 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (346)
T d1jmxb_ 158 LYVAG---PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS 234 (346)
T ss_dssp EEEES---SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEE
T ss_pred EEEeC---CcceEEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEE
Confidence 55543 347777765432111100 000 000
Q ss_pred ----ceE-EEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecC
Q psy14815 271 ----VWK-CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 345 (479)
Q Consensus 271 ----~~~-~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp 345 (479)
... ....... +...+..+.+++++.+++... ++.|++||..+++ .+.... +...+.+++|||
T Consensus 235 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~v~v~d~~~~~---------~~~~~~--~~~~~~~va~s~ 301 (346)
T d1jmxb_ 235 VDLKTGKTHTQEFAD-LTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRK---------LIKAAN--LDHTYYCVAFDK 301 (346)
T ss_dssp EETTTCCEEEEEEEE-CSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTE---------EEEEEE--CSSCCCEEEECS
T ss_pred EECCCCceEEEEeec-ccceeEEEEEeCCCCEEEEec-CCeEEEEECCCCc---------EEEEEc--CCCCEEEEEEcC
Confidence 000 0111222 255677888899888887766 4689999999886 444443 345799999999
Q ss_pred CCCCCCccc
Q psy14815 346 VVPEPQKTN 354 (479)
Q Consensus 346 ~~~~l~~~~ 354 (479)
||++|+.+.
T Consensus 302 DG~~l~v~~ 310 (346)
T d1jmxb_ 302 KGDKLYLGG 310 (346)
T ss_dssp SSSCEEEES
T ss_pred CCCEEEEEe
Confidence 999997654
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.63 E-value=2.2e-13 Score=126.34 Aligned_cols=264 Identities=9% Similarity=-0.026 Sum_probs=158.7
Q ss_pred ccccccccceEEEEECCCCCeEEEee----------CCCcEEEEecccccccccccCCCc--------cceEEEeecCCc
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCG----------EDKNIRLWVMVIREPYEKLHGLPV--------ETSLRQLVEDKN 66 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~----------~dg~v~iwd~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ 66 (479)
.++.++... .++|+|||++|++++ .++.|.+||..+++.+..+..... ...+........
T Consensus 61 ~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 138 (373)
T d2madh_ 61 GHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNAD 138 (373)
T ss_pred EEEeCCCCc--cEEEcCCCCEEEEEeecCCcccccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCc
Confidence 344444433 799999999998875 357899999999988776544321 122222222333
Q ss_pred EEEecCCCCCCc--eeeeEEeccccCCcEEEEEECCCCCEE-EEEECCCeEEEEECCCCeEEEeEEEe----CCCCcEEE
Q psy14815 67 IRLWGKESFGNK--FTAKAILSDGHQRTIRETAWSPCGNFI-ASASFDATTAVWDKRSGQFECNATLE----GHENEVKS 139 (479)
Q Consensus 67 i~~w~~~~~~~~--~~~~~~~~~~~~~~v~~v~~~~~~~~l-~t~~~dg~i~iwd~~~~~~~~~~~~~----~~~~~v~~ 139 (479)
+.+|........ ..........+.....++.++|+++.+ ++.+.|+.+.+|+...+......... ........
T Consensus 139 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (373)
T d2madh_ 139 LLFFQFAAGPAVGLVVQGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQP 218 (373)
T ss_pred EEEEEEcCCCceEEeeccCCeEEEEeccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeee
Confidence 333332211100 000000112344567788999988654 67888999999999887633222211 11222344
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeecc----------ccceeEEEEecCCCE----------EEEEEc
Q psy14815 140 VTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAH----------IQDVKKVRFHPFDNI----------LASASY 199 (479)
Q Consensus 140 l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~----------~~~v~~l~~~~~~~~----------l~~~~~ 199 (479)
..+.+++. ++..+.++.+.+|+....... .......+ ......+++++++.. +++...
T Consensus 219 ~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 296 (373)
T d2madh_ 219 AQANKSGR-IVWPVYSGKILQADISAAGAT-NKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAA 296 (373)
T ss_pred EEECCCce-EEEecCCceEEEEEcCCCeEE-EEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecC
Confidence 55565554 455567889999998775321 11111111 122334555555544 344556
Q ss_pred CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE--EEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEE
Q psy14815 200 DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR--LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT 277 (479)
Q Consensus 200 dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 277 (479)
++.+.+||..+++. +..+ .+...+..++|+|||+. +++++.|+.|++||+..+ +.+.+
T Consensus 297 ~~~v~~~d~~t~~~----~~~~-~~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg---------------~~~~~ 356 (373)
T d2madh_ 297 AKEVTSVTGLVGQT----SSQI-SLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAG---------------DQDQS 356 (373)
T ss_pred CCeEEEEECCCCcE----EEEe-cCCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCC---------------CEEEE
Confidence 77899999987764 3333 36677899999999984 467889999999998444 55677
Q ss_pred EeccccccEEEEEecC
Q psy14815 278 LSGHHGRTIYDISWCH 293 (479)
Q Consensus 278 ~~~~~~~~i~~l~~~~ 293 (479)
+.++ +.....+++.+
T Consensus 357 ~~~~-g~~P~~l~~~~ 371 (373)
T d2madh_ 357 TVEL-GSGPQVLSVMN 371 (373)
T ss_pred ECCC-CCCCcEEEEec
Confidence 7765 55566666543
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.56 E-value=6e-14 Score=129.21 Aligned_cols=251 Identities=12% Similarity=0.034 Sum_probs=147.0
Q ss_pred eEEEEECCCCCeEEEee----------CCCcEEEEecccccccccccCC-----------------CccceEEEe--ecC
Q psy14815 14 VWNVSWNPQGTMISSCG----------EDKNIRLWVMVIREPYEKLHGL-----------------PVETSLRQL--VED 64 (479)
Q Consensus 14 V~~l~~s~~~~~l~t~~----------~dg~v~iwd~~~~~~~~~~~~~-----------------~~~~~~~~~--~~~ 64 (479)
+..++|||||++|++++ .|+.|++||..+++.+..+... +++..++.. ..+
T Consensus 49 ~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~ 128 (355)
T d2bbkh_ 49 LPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPA 128 (355)
T ss_dssp SCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSS
T ss_pred CCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCC
Confidence 34799999999887653 4789999999998877654321 222333322 234
Q ss_pred CcEEEecCCCCCCceeeeE--EeccccCCcEEEEEECCCCCEEEEEE-CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEE
Q psy14815 65 KNIRLWGKESFGNKFTAKA--ILSDGHQRTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQFECNATLEGHENEVKSVT 141 (479)
Q Consensus 65 ~~i~~w~~~~~~~~~~~~~--~~~~~~~~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~ 141 (479)
..+.+|+............ ............+.+++++..++... .++.+.+++..... ..+...+....
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 201 (355)
T d2bbkh_ 129 PAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFH-------PEDEFLINHPA 201 (355)
T ss_dssp CEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCS-------CTTSCBCSCCE
T ss_pred ceeeeeecCCCcEeeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEeccccc-------ceecceeeecc
Confidence 4566676653211100000 00000011222344555554443332 22334444433221 12334455677
Q ss_pred EcCCCCEEEEEeCCCcEEEEEeCCCCceeeeeeeec----------cccceeEEEEecCCCEEEEEEcC----------C
Q psy14815 142 WSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA----------HIQDVKKVRFHPFDNILASASYD----------D 201 (479)
Q Consensus 142 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~----------~~~~v~~l~~~~~~~~l~~~~~d----------g 201 (479)
+.+++..++.++.++.+.+|++..+.. ..+..... .......+++++++..++....+ .
T Consensus 202 ~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 280 (355)
T d2bbkh_ 202 YSQKAGRLVWPTYTGKIHQIDLSSGDA-KFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASR 280 (355)
T ss_dssp EETTTTEEEEEBTTSEEEEEECTTSSC-EECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEE
T ss_pred ccCCCCeEEEecCCCeEEEEecCCCcE-EEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCC
Confidence 888888999999999999999987642 11211111 11233568899999888776544 3
Q ss_pred cEEEEecCCcccceEeeeeecCCCccEEEEEEccCCC--EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEe
Q psy14815 202 TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS--RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS 279 (479)
Q Consensus 202 ~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (479)
.|.+||..+++. +..+. +...+.+++|+|||+ ++++++.|+.|++||+.++ +.+.++.
T Consensus 281 ~v~v~d~~t~~~----~~~~~-~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg---------------~~~~~i~ 340 (355)
T d2bbkh_ 281 FVVVLDAKTGER----LAKFE-MGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESG---------------EELRSVN 340 (355)
T ss_dssp EEEEEETTTCCE----EEEEE-EEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTC---------------CEEEEEC
T ss_pred eEEEEeCCCCcE----EEEec-CCCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCC---------------CEEEEEe
Confidence 699999997664 33333 345688999999997 3466778999999998443 5566776
Q ss_pred ccccccEEEEEecC
Q psy14815 280 GHHGRTIYDISWCH 293 (479)
Q Consensus 280 ~~~~~~i~~l~~~~ 293 (479)
++ +.....+.+.+
T Consensus 341 ~~-G~~p~~i~~~d 353 (355)
T d2bbkh_ 341 QL-GHGPQVITTAD 353 (355)
T ss_dssp CC-CSSCCEEECCC
T ss_pred Cc-CCCccEEEeCC
Confidence 54 44444444433
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.54 E-value=2.2e-13 Score=130.81 Aligned_cols=119 Identities=18% Similarity=0.187 Sum_probs=84.5
Q ss_pred ccccccccceEEEEECCCCCeEEEeeC---------CCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCC
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGE---------DKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESF 75 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~---------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~ 75 (479)
.+|..|...|.++.|||||++|+.++. ++.+.|||+++++...
T Consensus 55 ~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~~---------------------------- 106 (470)
T d2bgra1 55 STFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT---------------------------- 106 (470)
T ss_dssp TTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC----------------------------
T ss_pred hhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCcccc----------------------------
Confidence 467788899999999999999998853 3456667766554321
Q ss_pred CCceeeeEEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEE-------EeC---------CCCcEEE
Q psy14815 76 GNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNAT-------LEG---------HENEVKS 139 (479)
Q Consensus 76 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~-------~~~---------~~~~v~~ 139 (479)
...+...+..+.|||||+.+|... ++.+.+|+..+++...+.. +.+ ..+....
T Consensus 107 ----------l~~~~~~~~~~~~SPDG~~ia~~~-~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~ 175 (470)
T d2bgra1 107 ----------EERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSA 175 (470)
T ss_dssp ----------SSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBC
T ss_pred ----------cccCCccccccccccCcceeeEee-cccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccc
Confidence 246778899999999999999975 6789999998886322211 011 1123456
Q ss_pred EEEcCCCCEEEEEeCCCc-EEEEE
Q psy14815 140 VTWSKNGQFLATCSRDKS-VWVWE 162 (479)
Q Consensus 140 l~~~~~~~~l~~~~~dg~-i~vwd 162 (479)
+.|+|||++|+....|.. +..|+
T Consensus 176 ~~wSPDGk~ia~~~~d~~~v~~~~ 199 (470)
T d2bgra1 176 LWWSPNGTFLAYAQFNDTEVPLIE 199 (470)
T ss_dssp EEECTTSSEEEEEEEECTTCCEEE
T ss_pred cEECCCCCccceeEecCCcCceEE
Confidence 889999999999876533 44443
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.53 E-value=1.3e-13 Score=127.76 Aligned_cols=253 Identities=7% Similarity=-0.071 Sum_probs=154.3
Q ss_pred cccccccceEEEEECCCCCeEEEee----------CCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCC
Q psy14815 6 TLKGHQGRVWNVSWNPQGTMISSCG----------EDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESF 75 (479)
Q Consensus 6 ~l~~h~~~V~~l~~s~~~~~l~t~~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~ 75 (479)
++.++... .++|+|||+.|++++ .|++|++||..+++.+..+......
T Consensus 61 ~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~-------------------- 118 (368)
T d1mdah_ 61 HSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAP-------------------- 118 (368)
T ss_dssp EEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSC--------------------
T ss_pred EEeCCCCC--cceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccc--------------------
Confidence 34444433 589999999988754 3677999998887766554211000
Q ss_pred CCceeeeEEeccccCCcEEEEEECCCCCEEEEEE-CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC
Q psy14815 76 GNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 154 (479)
Q Consensus 76 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~ 154 (479)
..........++|+|||++++++. .++.+.+||+.+++. ...+..+..... +......++..+.
T Consensus 119 ----------~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~--~~~~~~~~~~~~---~~~~~~~~v~~~~ 183 (368)
T d1mdah_ 119 ----------RFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTKSASCFHI---HPGAAATHYLGSC 183 (368)
T ss_dssp ----------SCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEECSSCCCC---EEEETTEEECCCC
T ss_pred ----------eecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcE--eEEeeccCcceE---ccCCCceEEEEcC
Confidence 001112233589999999998876 468999999999974 444444433211 1123456677778
Q ss_pred CCcEEEEEeCCCCceeee---eeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCC-------
Q psy14815 155 DKSVWVWEVGEEDEYECA---AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSH------- 224 (479)
Q Consensus 155 dg~i~vwd~~~~~~~~~~---~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~------- 224 (479)
||.+.++++......... .....+...+....+.+++..+.+ ..+.+.+++....... .......+
T Consensus 184 Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~ 259 (368)
T d1mdah_ 184 PASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWA--VASSILQGDIPAAGAT--MKAAIDGNESGRKAD 259 (368)
T ss_dssp TTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEEC--BSSCCEEEECCSSCCE--EECCCCSSCTHHHHT
T ss_pred CCCEEEEEecCCceeeeeeecccccccccceeecccccCcEEEEe--cCCCEEEEeecCCceE--EEeecccccceeeee
Confidence 888888887765322111 112233344556677777765544 3456667766554421 11111111
Q ss_pred ---CccEEEEEEccCCCEEEEeeCC---------CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec
Q psy14815 225 ---TSTVWSLAFDRIGSRLATCSDD---------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 292 (479)
Q Consensus 225 ---~~~v~~~~~~~~~~~l~s~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 292 (479)
......+++++++..++....+ ..|.+||.... +.+.++.. ...+.+++|+
T Consensus 260 ~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~---------------~~~~~~~~--~~~~~~~a~s 322 (368)
T d1mdah_ 260 NFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG---------------QTSGPISN--GHDSDAIIAA 322 (368)
T ss_dssp TEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC---------------CEEECCEE--EEEECEEEEC
T ss_pred eecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCC---------------cEeEEecC--CCceeEEEEC
Confidence 1112347788888877654322 35888997443 33444443 4578899999
Q ss_pred CCCC--eEEEEeCCCeEEEcccCCCC
Q psy14815 293 HLTD--LIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 293 ~~~~--~l~~~~~dg~i~vw~~~~~~ 316 (479)
|||+ +++++..|+.|++||..+++
T Consensus 323 pDG~~~ly~s~~~~~~v~v~D~~tgk 348 (368)
T d1mdah_ 323 QDGASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp CSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred CCCCEEEEEEeCCCCeEEEEECCCCC
Confidence 9997 34667778999999999987
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.52 E-value=9.9e-15 Score=135.05 Aligned_cols=307 Identities=10% Similarity=-0.015 Sum_probs=180.8
Q ss_pred EEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEE
Q psy14815 26 ISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI 105 (479)
Q Consensus 26 l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l 105 (479)
++|++.+|.|++|++.+++.++.+...........+..+.+.+++.... ....-..|.-.......+|||++|
T Consensus 14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~-------~~~~gd~hhP~~s~t~gtpDGr~l 86 (441)
T d1qnia2 14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQ-------QYLNGDCHHPHISMTDGRYDGKYL 86 (441)
T ss_dssp EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSS-------CCSCCCBCCCEEEEETTEEEEEEE
T ss_pred EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEeccc-------ccccCcccCCCcceecccCCCCEE
Confidence 6788899999999999999888775421111111111111111111000 000013355566667778999998
Q ss_pred EEEE-CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCE--EEEEeCCC-----------------cEEEEEeCC
Q psy14815 106 ASAS-FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF--LATCSRDK-----------------SVWVWEVGE 165 (479)
Q Consensus 106 ~t~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~--l~~~~~dg-----------------~i~vwd~~~ 165 (479)
++.. .+++|.++|+.+++...+..+. +...+..++|+|+|+. ++..+.+. .+..+|..+
T Consensus 87 fV~d~~~~rVavIDl~t~k~~~ii~iP-~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t 165 (441)
T d1qnia2 87 FINDKANTRVARIRLDIMKTDKITHIP-NVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAET 165 (441)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECT-TCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTT
T ss_pred EEEcCCCCEEEEEECCCCcEeeEEecC-CCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCcc
Confidence 6664 5789999999999744443333 4677899999999984 44333322 124466655
Q ss_pred CCceeeeeeeeccccceeEEEEecCCCEEEEEEcCC-----------------------------------------cEE
Q psy14815 166 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD-----------------------------------------TVK 204 (479)
Q Consensus 166 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg-----------------------------------------~i~ 204 (479)
.+ ...+... ......+.|+|+|+++++++.+. .+.
T Consensus 166 ~~---v~~qI~v-~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~v 241 (441)
T d1qnia2 166 MD---VAWQVIV-DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPV 241 (441)
T ss_dssp CS---EEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCE
T ss_pred ce---eeEEEec-CCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEE
Confidence 43 2222222 23567899999999998887542 222
Q ss_pred EEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE-EeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecccc
Q psy14815 205 LFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA-TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 283 (479)
Q Consensus 205 i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (479)
+++....+ .+..+....+ ...+.++|||++++ ++..+++|.+||+.+......-.. ........... .+
T Consensus 242 vd~~~~~~----v~~~IPvgks-PhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~---~~~~~~~~~~~--~g 311 (441)
T d1qnia2 242 VDGRGESE----FTRYIPVPKN-PHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKI---ELRDTIVAEPE--LG 311 (441)
T ss_dssp EECSSSCS----SEEEECCBSS-CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSS---CGGGGEEECCB--CC
T ss_pred EEcccCCc----eEEEEeCCCC-ccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccC---CcceEEEeecc--cc
Confidence 22222111 1233333333 46789999999875 567899999999865322110000 00111111111 13
Q ss_pred ccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC----CCCCceeeEEE-eccccccccceeEEEecCCCCCCCccc
Q psy14815 284 RTIYDISWCHLTDLIATACGDDAIRIFKENPEA----GDSDMVSFDLV-HTEHRAHNQDVNCVAWNPVVPEPQKTN 354 (479)
Q Consensus 284 ~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~----~~~~~~~~~~~-~~~~~~h~~~v~~~~~sp~~~~l~~~~ 354 (479)
-.....+|.++|..+.+...|..|..|++.... ........+.+ .....+|...+.+.+++|||++|++..
T Consensus 312 lgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~ 387 (441)
T d1qnia2 312 LGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLS 387 (441)
T ss_dssp SCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEEE
T ss_pred cCcccceecCCceEEEcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCcEEEecC
Confidence 345567899999888888899999999985211 01111111111 112258988899999999999998774
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.37 E-value=2.1e-12 Score=123.71 Aligned_cols=154 Identities=23% Similarity=0.288 Sum_probs=111.7
Q ss_pred EEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEE
Q psy14815 15 WNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 94 (479)
Q Consensus 15 ~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~ 94 (479)
..+.|.++++++.. .|+.+.+||+.+++....+... .+..|...|.
T Consensus 20 ~~~~W~~d~~~~~~--~~~~~~~~~~~t~~~~~~~~~~--------------------------------~~~~~~~~i~ 65 (470)
T d2bgra1 20 YSLRWISDHEYLYK--QENNILVFNAEYGNSSVFLENS--------------------------------TFDEFGHSIN 65 (470)
T ss_dssp CCCEECSSSEEEEE--SSSCEEEEETTTCCEEEEECTT--------------------------------TTTTSSSCCC
T ss_pred cCCEeCCCCEEEEE--cCCcEEEEECCCCCEEEEEchh--------------------------------hhhhccCccc
Confidence 35789999987764 4788999999888764333111 1245677899
Q ss_pred EEEECCCCCEEEEEEC---------CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCC
Q psy14815 95 ETAWSPCGNFIASASF---------DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 165 (479)
Q Consensus 95 ~v~~~~~~~~l~t~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~ 165 (479)
++.|||||++|+.++. ++.+.+||+.+++ ...+..+...+..+.|||||+.++.. .++.+.+|+..+
T Consensus 66 ~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~---~~~l~~~~~~~~~~~~SPDG~~ia~~-~~~~l~~~~~~~ 141 (470)
T d2bgra1 66 DYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ---LITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPN 141 (470)
T ss_dssp EEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE---ECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTT
T ss_pred eeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCc---ccccccCCccccccccccCcceeeEe-ecccceEEECCC
Confidence 9999999999998853 4678999999985 34567788899999999999999986 567899999887
Q ss_pred CCceeeeee------eec---------cccceeEEEEecCCCEEEEEEcCCc-EEEE
Q psy14815 166 EDEYECAAV------INA---------HIQDVKKVRFHPFDNILASASYDDT-VKLF 206 (479)
Q Consensus 166 ~~~~~~~~~------~~~---------~~~~v~~l~~~~~~~~l~~~~~dg~-i~i~ 206 (479)
+...+.... +.+ ..+....+.|+|||+.|+....|.+ +..|
T Consensus 142 g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~ 198 (470)
T d2bgra1 142 LPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLI 198 (470)
T ss_dssp SCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEE
T ss_pred CceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEecCCcCceE
Confidence 754322211 011 1223466889999999999876533 4443
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.36 E-value=1.2e-11 Score=114.26 Aligned_cols=279 Identities=8% Similarity=-0.117 Sum_probs=158.5
Q ss_pred ccccceEEEEECCCCCeE---EEeeCCCc--EEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 9 GHQGRVWNVSWNPQGTMI---SSCGEDKN--IRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l---~t~~~dg~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
.+.++...++..++++.. ++...+|+ +.+||..+++.+..+
T Consensus 17 ~~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~---------------------------------- 62 (368)
T d1mdah_ 17 ASDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHS---------------------------------- 62 (368)
T ss_dssp CCCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEE----------------------------------
T ss_pred ccCCCccccccCCCCcceeEEeeccCCCcceEEEEeCCCCcEEEEE----------------------------------
Confidence 345556666777888753 23445555 445576666554332
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEE----------CCCeEEEEECCCCeEEEeEEEeCC-----CCcEEEEEEcCCCCE
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASAS----------FDATTAVWDKRSGQFECNATLEGH-----ENEVKSVTWSKNGQF 148 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~----------~dg~i~iwd~~~~~~~~~~~~~~~-----~~~v~~l~~~~~~~~ 148 (479)
..+..+ .++|+|||+.+++.+ .|+.|.+||..+++.......... ......++|+|||++
T Consensus 63 ---~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~ 137 (368)
T d1mdah_ 63 ---LGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSAC 137 (368)
T ss_dssp ---EECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSC
T ss_pred ---eCCCCC--cceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCE
Confidence 122222 478999999988765 367899999999874333222211 112346899999999
Q ss_pred EEEEe-CCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEe--eeeecCCC
Q psy14815 149 LATCS-RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN--FATLKSHT 225 (479)
Q Consensus 149 l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~~~~ 225 (479)
++++. .++.+.+||+.+. +....+..+.... .+......++..+.||.+.++++......... ......+.
T Consensus 138 l~va~~~~~~v~~~d~~~~---~~~~~~~~~~~~~---~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (368)
T d1mdah_ 138 LLFFLFGSSAAAGLSVPGA---SDDQLTKSASCFH---IHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQN 211 (368)
T ss_dssp EEEEECSSSCEEEEEETTT---EEEEEEECSSCCC---CEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSC
T ss_pred EEEEeCCCCeEEEEECCCC---cEeEEeeccCcce---EccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccc
Confidence 98876 5799999999987 3334333332221 11112345666677888888877654421111 01122344
Q ss_pred ccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCC-
Q psy14815 226 STVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD- 304 (479)
Q Consensus 226 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d- 304 (479)
..+....+.+++..+.+. .+.+.+++............... ........+. ......+++++++..++....+
T Consensus 212 ~~~~~~~~~~~g~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~g~~~~a~~~~~~~~~v~~~~~ 285 (368)
T d1mdah_ 212 CSSQAAQANYPGMLVWAV--ASSILQGDIPAAGATMKAAIDGN-ESGRKADNFR---SAGFQMVAKLKNTDGIMILTVEH 285 (368)
T ss_dssp BCSCCEEETTTTEEEECB--SSCCEEEECCSSCCEEECCCCSS-CTHHHHTTEE---ECSSSCEEEETTTTEEEEEEEEC
T ss_pred cceeecccccCcEEEEec--CCCEEEEeecCCceEEEeecccc-cceeeeeeec---CCCceeEEEcCCCCEEEEEecCC
Confidence 445567777777665544 45566666543322110000000 0000000000 1122347788888876654332
Q ss_pred --------CeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCC
Q psy14815 305 --------DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPE 349 (479)
Q Consensus 305 --------g~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 349 (479)
..|.+||..+++ .+..+ .+...+.+++|||||+.
T Consensus 286 ~~~~~~~~~~v~v~D~~t~~---------~~~~~--~~~~~~~~~a~spDG~~ 327 (368)
T d1mdah_ 286 SRSCLAAAENTSSVTASVGQ---------TSGPI--SNGHDSDAIIAAQDGAS 327 (368)
T ss_dssp SSCTTSCEEEEEEEESSSCC---------EEECC--EEEEEECEEEECCSSSC
T ss_pred CceeecCCceEEEEECCCCc---------EeEEe--cCCCceeEEEECCCCCE
Confidence 358999999987 44444 34467899999999975
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.30 E-value=1.1e-11 Score=114.52 Aligned_cols=245 Identities=12% Similarity=0.038 Sum_probs=151.7
Q ss_pred cccceEEEEECCCCCeEEEee-CCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccc
Q psy14815 10 HQGRVWNVSWNPQGTMISSCG-EDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDG 88 (479)
Q Consensus 10 h~~~V~~l~~s~~~~~l~t~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~ 88 (479)
|.-......++|||++|+... .+++|.++|+.+++....+ ...
T Consensus 70 hhP~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~k~~~ii------------------------------------~iP 113 (441)
T d1qnia2 70 HHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKIT------------------------------------HIP 113 (441)
T ss_dssp CCCEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEE------------------------------------ECT
T ss_pred cCCCcceecccCCCCEEEEEcCCCCEEEEEECCCCcEeeEE------------------------------------ecC
Confidence 445566666789999886664 6788999999877654432 124
Q ss_pred cCCcEEEEEECCCCC--EEEEEECCC-----------------eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEE
Q psy14815 89 HQRTIRETAWSPCGN--FIASASFDA-----------------TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 149 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~--~l~t~~~dg-----------------~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l 149 (479)
+...+..++|+|+++ +++..+.+. .+..+|..+.+.. ..+... .....+.|+|+|+++
T Consensus 114 ~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~--~qI~v~-~~p~~v~~spdGk~a 190 (441)
T d1qnia2 114 NVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVA--WQVIVD-GNLDNTDADYTGKYA 190 (441)
T ss_dssp TCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEE--EEEEES-SCCCCEEECSSSSEE
T ss_pred CCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceee--EEEecC-CCccceEECCCCCEE
Confidence 567888999999887 444444332 2355788777633 333322 356789999999999
Q ss_pred EEEeCCC-----------------------------------------cEEEEEeCCCCceeeeeeeeccccceeEEEEe
Q psy14815 150 ATCSRDK-----------------------------------------SVWVWEVGEEDEYECAAVINAHIQDVKKVRFH 188 (479)
Q Consensus 150 ~~~~~dg-----------------------------------------~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~ 188 (479)
++++.+. .+.+++.... ..+..+.... ....+.++
T Consensus 191 ~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~---~v~~~IPvgk-sPhGv~vS 266 (441)
T d1qnia2 191 TSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGES---EFTRYIPVPK-NPHGLNTS 266 (441)
T ss_dssp EEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSC---SSEEEECCBS-SCCCEEEC
T ss_pred EEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCC---ceEEEEeCCC-CccCceEC
Confidence 8887542 2222222221 2223333333 34679999
Q ss_pred cCCCEEE-EEEcCCcEEEEecCCcccc------e-EeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCC
Q psy14815 189 PFDNILA-SASYDDTVKLFKEDKAEAD------W-INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNS 260 (479)
Q Consensus 189 ~~~~~l~-~~~~dg~i~i~d~~~~~~~------~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 260 (479)
|||++++ ++..+++|.+||+.+.... + ..+.......-.....+|+++|..+.+...|..|..|++......
T Consensus 267 PDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~ 346 (441)
T d1qnia2 267 PDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKH 346 (441)
T ss_dssp TTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHH
T ss_pred CCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCCceEEEcccccceEEEeccchhhhh
Confidence 9999765 4667999999998753310 0 001111111223455689999988889999999999997432110
Q ss_pred CCCCCCCCCCceEEEEEE-----eccccccEEEEEecCCCCeEEEEeC
Q psy14815 261 AGIPTPDNDSVWKCVCTL-----SGHHGRTIYDISWCHLTDLIATACG 303 (479)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~l~~~~~~~~l~~~~~ 303 (479)
.. .......+..+ .+| ...+.+.+++|||+||++++.
T Consensus 347 ~~-----~~~~~~v~~~~~v~y~~GH-~~~~~~~t~~pdGk~l~s~~k 388 (441)
T d1qnia2 347 YN-----GDRVNYIRQKLDVQYQPGH-NHASLTESRDADGKWLVVLSK 388 (441)
T ss_dssp HT-----TCCCCCEEEEEECSSCEEE-EEETTTTSTTCCCCEEEEEES
T ss_pred hc-----cCCCceeEeccccccCCCC-CccccccccCCCCcEEEecCc
Confidence 00 00111223333 344 556677789999999999944
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=99.28 E-value=9e-09 Score=94.26 Aligned_cols=171 Identities=13% Similarity=0.123 Sum_probs=107.7
Q ss_pred CcEEEEEEcCCCCEEEEEeC-CCcEEEEEeCCCCceeeeeeee--ccccceeEEEEecCCCEEEEEE-cCCcEEEEecCC
Q psy14815 135 NEVKSVTWSKNGQFLATCSR-DKSVWVWEVGEEDEYECAAVIN--AHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDK 210 (479)
Q Consensus 135 ~~v~~l~~~~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~--~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~ 210 (479)
..+.++.|+|+|+++++++. ...|.+|+.............. ......+.++|+|+++++.+.. .+++|.+|+...
T Consensus 145 ~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~ 224 (365)
T d1jofa_ 145 TGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDP 224 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecC
Confidence 35789999999999888865 4578888876554333222222 2345678999999999886655 578899999876
Q ss_pred cccce-Eeeeee--------------cCCCccEEEEEEccCCCEEEEeeC------CCeEEEEeccCCCCCCCCCCCCCC
Q psy14815 211 AEADW-INFATL--------------KSHTSTVWSLAFDRIGSRLATCSD------DATVKIWKEYKPGNSAGIPTPDND 269 (479)
Q Consensus 211 ~~~~~-~~~~~~--------------~~~~~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~ 269 (479)
..... ...... ..+......+.++|+|++|+++.. .+.|..|++.......
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~-------- 296 (365)
T d1jofa_ 225 ATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIE-------- 296 (365)
T ss_dssp TTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEE--------
T ss_pred CCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCcee--------
Confidence 54211 111111 112234568899999999987642 2236677764432210
Q ss_pred CceEEEEEEeccccccEEEEEecC-CCCeEEEE-eCCCeEEEcccCCC
Q psy14815 270 SVWKCVCTLSGHHGRTIYDISWCH-LTDLIATA-CGDDAIRIFKENPE 315 (479)
Q Consensus 270 ~~~~~~~~~~~~~~~~i~~l~~~~-~~~~l~~~-~~dg~i~vw~~~~~ 315 (479)
....+..... .+.....++++| +|++|+++ ..++.|.+|+++..
T Consensus 297 -~~~~~~~~~~-~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~ 342 (365)
T d1jofa_ 297 -KQLFLSPTPT-SGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp -EEEEEEECSS-CCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred -eEeEeeEEEc-CCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCC
Confidence 0011111111 244567899998 78977666 46799999988654
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.23 E-value=3e-08 Score=86.43 Aligned_cols=222 Identities=14% Similarity=0.125 Sum_probs=138.0
Q ss_pred ccCCcEEEEEECCCCCEEEEEECCC---eEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-CCcEEEEEe
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFDA---TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DKSVWVWEV 163 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg~i~vwd~ 163 (479)
.+...+...+|||||+.||...... .+.+.+..++. ...+..+........|+|+|+.++.... ++...++..
T Consensus 36 ~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~ 112 (269)
T d2hqsa1 36 RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA---VRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVM 112 (269)
T ss_dssp EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC---EEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred cCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCc---eeEEeeeecccccceecCCCCeeeEeeecCCccceeec
Confidence 3456788999999999999876543 57777887775 2344456778889999999998887654 333333333
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEEE-EcCCc--EEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEE
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASA-SYDDT--VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 240 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~--i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 240 (479)
..... . ...............+++++..++.. ..+|. |...++.... ...+...........|+|+++.+
T Consensus 113 ~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~spdg~~~ 185 (269)
T d2hqsa1 113 DLASG-Q-IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA-----PQRITWEGSQNQDADVSSDGKFM 185 (269)
T ss_dssp ETTTC-C-EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC-----CEECCCSSSEEEEEEECTTSSEE
T ss_pred ccccc-c-ceeeeeccccccccccccccccceecccccCCceEeeeeccccc-----ceeeeccccccccccccccccee
Confidence 32211 1 11222233334455677766654444 44554 5555555443 23344556677888999999988
Q ss_pred EEeeC-CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeC---CCeEEEcccCCCC
Q psy14815 241 ATCSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG---DDAIRIFKENPEA 316 (479)
Q Consensus 241 ~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~---dg~i~vw~~~~~~ 316 (479)
+..+. .+...+|........ .... .. ........|+|||+.|+..+. ...|++++++.+.
T Consensus 186 ~~~~~~~~~~~i~~~~~~~~~--------------~~~~-~~-~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~ 249 (269)
T d2hqsa1 186 VMVSSNGGQQHIAKQDLATGG--------------VQVL-SS-TFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF 249 (269)
T ss_dssp EEEEECSSCEEEEEEETTTCC--------------EEEC-CC-SSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC
T ss_pred EEEeecCCceeeeEeeccccc--------------ceEe-ec-CccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCC
Confidence 76654 445555554332211 1111 11 345567889999998876554 3468899998876
Q ss_pred CCCCceeeEEEeccccccccceeEEEecCC
Q psy14815 317 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPV 346 (479)
Q Consensus 317 ~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 346 (479)
...+. ...+.+...+|||-
T Consensus 250 ----------~~~lt-~~~g~~~~p~WSP~ 268 (269)
T d2hqsa1 250 ----------KARLP-ATDGQVKFPAWSPY 268 (269)
T ss_dssp ----------EEECC-CSSSEEEEEEECCC
T ss_pred ----------EEEEe-CCCCcEEeEEeCCC
Confidence 44433 34667888999994
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=99.21 E-value=1.1e-08 Score=90.97 Aligned_cols=235 Identities=10% Similarity=0.012 Sum_probs=154.7
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCcee
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 170 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 170 (479)
..+..++++|||+++++...+++|..|+..... . .+......+.+++|+++|+++++...++.+..++........
T Consensus 28 ~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~~-~---~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~ 103 (302)
T d2p4oa1 28 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-Q---IHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 103 (302)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE-E---EEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CCcCCEEECCCCCEEEEeCCCCEEEEEeCCCCE-E---EEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccce
Confidence 357889999999999999999999999866442 2 233455789999999999999988888888888876543211
Q ss_pred eeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeee------eecCCCccEEEEEEccCCCEEEEee
Q psy14815 171 CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFA------TLKSHTSTVWSLAFDRIGSRLATCS 244 (479)
Q Consensus 171 ~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------~~~~~~~~v~~~~~~~~~~~l~s~~ 244 (479)
..............+.+.++++++++.+.++.+..+|...+........ ...........+.++. +..+++.+
T Consensus 104 ~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~-~~l~~~~~ 182 (302)
T d2p4oa1 104 ETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFG-NFLYVSNT 182 (302)
T ss_dssp EEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEET-TEEEEEET
T ss_pred eeccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccC-CceeeecC
Confidence 1111122345578999999999988888888888888876542111100 0111223456666653 33455666
Q ss_pred CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceee
Q psy14815 245 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSF 324 (479)
Q Consensus 245 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~ 324 (479)
..+.|..++......... ...+.. ......+++.++|.++++...++.|..++.....
T Consensus 183 ~~~~i~~~~~~~~~~~~~------------~~~~~~--~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~~-------- 240 (302)
T d2p4oa1 183 EKMLLLRIPVDSTDKPGE------------PEIFVE--QTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRST-------- 240 (302)
T ss_dssp TTTEEEEEEBCTTSCBCC------------CEEEEE--SCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCE--------
T ss_pred CCCeEEeccccccccccc------------cccccC--CCCCcceEECCCCCEEEEEcCCCcEEEECCCCCE--------
Confidence 778888888754433211 111111 2345679999999988888888999999776542
Q ss_pred EEEeccccccccceeEEEe---cCCCCCCCcc
Q psy14815 325 DLVHTEHRAHNQDVNCVAW---NPVVPEPQKT 353 (479)
Q Consensus 325 ~~~~~~~~~h~~~v~~~~~---sp~~~~l~~~ 353 (479)
..+... ...-...++++| +||++.|...
T Consensus 241 ~~~~~~-~~~~~~pt~vafg~~~~D~~~Lyvt 271 (302)
T d2p4oa1 241 TIIAQA-EQGVIGSTAVAFGQTEGDCTAIYVV 271 (302)
T ss_dssp EEEECG-GGTCTTEEEEEECCSTTTTTEEEEE
T ss_pred EEEEec-CCCCCCceEEEEcCCCCCCCEEEEE
Confidence 112222 122345789999 6788777543
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.18 E-value=9.4e-09 Score=89.35 Aligned_cols=238 Identities=11% Similarity=0.058 Sum_probs=149.5
Q ss_pred cceEEEEECCCCCeEEEe-eCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccC
Q psy14815 12 GRVWNVSWNPQGTMISSC-GEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQ 90 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 90 (479)
-.-.+|+++++|+..++. +..+.+..++........ ....-.
T Consensus 14 ~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~-------------------------------------~~~~~~ 56 (260)
T d1rwia_ 14 LSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV-------------------------------------LPFNGL 56 (260)
T ss_dssp CCEEEEEECTTCCEEEEECSSSCEEEEEC----CEEE-------------------------------------CCCCSC
T ss_pred CCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEE-------------------------------------eccCCc
Confidence 445899999999966654 455667766543221110 001112
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCcee
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 170 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 170 (479)
.....+++++++.++++....+.+++++-.+.. ...... ......++++.++++++++-..+..+..++......
T Consensus 57 ~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~--~~~~~~-~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~-- 131 (260)
T d1rwia_ 57 YQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQ--TVLPFD-GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ-- 131 (260)
T ss_dssp CSCCCEEECTTCCEEEEETTTEEEEECTTCSCC--EECCCC-SCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSC--
T ss_pred cCceEEEEcCCCCEEEeeeeeceeeeeeeccce--eeeeee-eeeecccccccccceeEeecccccccccccccccee--
Confidence 345678899999887777666667666554443 222222 234678999999998777766666677776655421
Q ss_pred eeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEE
Q psy14815 171 CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 250 (479)
Q Consensus 171 ~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 250 (479)
...... .......++++++++++++...++.|..+|...... .............++++++|+.+++....+.|.
T Consensus 132 ~~~~~~-~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~----~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~ 206 (260)
T d1rwia_ 132 TVLPFT-GLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ----VVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVV 206 (260)
T ss_dssp EECCCC-SCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCE----EECCCSSCCSEEEEEECTTCCEEEEETTTTEEE
T ss_pred eeeeec-ccCCcceeeecCCCCEeeecccccccccccccccee----eeeeccccCCCccceeeeeeeeeeeecCCCEEE
Confidence 111111 123457899999999888888888999999875442 122223445678999999998888887788888
Q ss_pred EEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEccc
Q psy14815 251 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 312 (479)
Q Consensus 251 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~ 312 (479)
.++...... ..+....-.....|+++++|.++++-..++.|+.++.
T Consensus 207 ~~~~~~~~~----------------~~~~~~~~~~P~~i~~d~~g~l~vad~~~~rI~~i~~ 252 (260)
T d1rwia_ 207 KLLAGSTTS----------------TVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTS 252 (260)
T ss_dssp EECTTCSCC----------------EECCCCSCCCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred EEeCCCCeE----------------EEEccCCCCCeEEEEEeCCCCEEEEECCCCEEEEEeC
Confidence 887532211 1111111235678999999988877666776665543
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=99.13 E-value=2.2e-08 Score=89.13 Aligned_cols=234 Identities=11% Similarity=0.029 Sum_probs=149.1
Q ss_pred ceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCc
Q psy14815 13 RVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRT 92 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 92 (479)
.+..++++|||+++++...+++|..|+...... . .......
T Consensus 29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~~~--~-------------------------------------~~~~~~~ 69 (302)
T d2p4oa1 29 FLENLASAPDGTIFVTNHEVGEIVSITPDGNQQ--I-------------------------------------HATVEGK 69 (302)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCCEE--E-------------------------------------EEECSSE
T ss_pred CcCCEEECCCCCEEEEeCCCCEEEEEeCCCCEE--E-------------------------------------EEcCCCC
Confidence 578999999999999998899888776432110 0 1234467
Q ss_pred EEEEEECCCCCEEEEEECCCeEEEEECCCC--eEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCcee
Q psy14815 93 IRETAWSPCGNFIASASFDATTAVWDKRSG--QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 170 (479)
Q Consensus 93 v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 170 (479)
+.+++|+++|+++++...++.+..|+.... ....+.. .........+.+.++++++++-+.++.+..+|........
T Consensus 70 ~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~ 148 (302)
T d2p4oa1 70 VSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLT-LPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSI 148 (302)
T ss_dssp EEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEE-CTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cceEEEcCCCCeEEEecCCceEEEEEecccccceeeccc-cCCccccceeEEccCCCEEeeccccccceeeeccCCccee
Confidence 899999999999999888888888876543 2222222 2244568899999999988888888888888877653111
Q ss_pred eeee-------eeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 171 CAAV-------INAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 171 ~~~~-------~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
.... ..........+.++. +.++++.+..+.|..++........ .............++++++|+.+++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~ngi~~~~-~~l~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~pdgia~d~dG~l~va~ 225 (302)
T d2p4oa1 149 WLEHPMLARSNSESVFPAANGLKRFG-NFLYVSNTEKMLLLRIPVDSTDKPG--EPEIFVEQTNIDDFAFDVEGNLYGAT 225 (302)
T ss_dssp EEECGGGSCSSTTCCSCSEEEEEEET-TEEEEEETTTTEEEEEEBCTTSCBC--CCEEEEESCCCSSEEEBTTCCEEEEC
T ss_pred EecCCccceeeccCcccccccccccC-CceeeecCCCCeEEecccccccccc--ccccccCCCCCcceEECCCCCEEEEE
Confidence 0000 001112345666653 4456666778888888876543211 11111122334579999999988888
Q ss_pred eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEe---cCCCCeEEEEeCC
Q psy14815 244 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW---CHLTDLIATACGD 304 (479)
Q Consensus 244 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~---~~~~~~l~~~~~d 304 (479)
..++.|..++.... ...+...... -...++++| ++|++.|..++..
T Consensus 226 ~~~~~V~~i~p~G~--------------~~~~~~~~~~-~~~pt~vafg~~~~D~~~Lyvtt~~ 274 (302)
T d2p4oa1 226 HIYNSVVRIAPDRS--------------TTIIAQAEQG-VIGSTAVAFGQTEGDCTAIYVVTNG 274 (302)
T ss_dssp BTTCCEEEECTTCC--------------EEEEECGGGT-CTTEEEEEECCSTTTTTEEEEEECT
T ss_pred cCCCcEEEECCCCC--------------EEEEEecCCC-CCCceEEEEcCCCCCCCEEEEECCC
Confidence 88888888875211 1112222222 345789999 6677877666543
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.12 E-value=1.2e-07 Score=83.14 Aligned_cols=244 Identities=12% Similarity=0.127 Sum_probs=156.9
Q ss_pred cceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCC
Q psy14815 12 GRVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQR 91 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 91 (479)
.....|+++++|+.+++-...+.|++||.+ ++.+..+..... ..+...
T Consensus 23 ~~P~gvavd~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~-------------------------------~~~~~~ 70 (279)
T d1q7fa_ 23 TEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGK-------------------------------RDSQLL 70 (279)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSS-------------------------------STTCBS
T ss_pred CCccEEEEcCCCCEEEEECCCCEEEEEeCC-CCEEEEecccCC-------------------------------Cccccc
Confidence 346899999999988887778889999853 443332211000 011122
Q ss_pred cEEEEEECCCC-CEEEEE-ECCCeEEEEECCCCeEEEeEEEe-CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc
Q psy14815 92 TIRETAWSPCG-NFIASA-SFDATTAVWDKRSGQFECNATLE-GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 92 ~v~~v~~~~~~-~~l~t~-~~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 168 (479)
....+++.++. ..+++. +.++.|..++.... ....+. ........+++.+++..+++....+.+.+++....
T Consensus 71 ~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~---~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g~-- 145 (279)
T d1q7fa_ 71 YPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQ---FVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN-- 145 (279)
T ss_dssp SEEEEEEETTTTEEEEEECGGGCEEEEECTTSC---EEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC--
T ss_pred ccccccccccccccceeccCCcccccccccccc---ceeecCCCcccccceeccccCCcEEEEeeccceeeEeccCCc--
Confidence 33445554443 333333 34457777776443 233332 23456788999999998888777778888876542
Q ss_pred eeeeeee--eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeee--cCCCccEEEEEEccCCCEEEEee
Q psy14815 169 YECAAVI--NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL--KSHTSTVWSLAFDRIGSRLATCS 244 (479)
Q Consensus 169 ~~~~~~~--~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~ 244 (479)
.+..+ ..+......+++.++++.+++....+.|.+||..... +.++ .+.......++++++|+.+++-.
T Consensus 146 --~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~G~~-----~~~~g~~g~~~~P~giavD~~G~i~Vad~ 218 (279)
T d1q7fa_ 146 --VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQY-----LRQIGGEGITNYPIGVGINSNGEILIADN 218 (279)
T ss_dssp --EEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCE-----EEEESCTTTSCSEEEEEECTTCCEEEEEC
T ss_pred --eeecccccccccccceeeeccceeEEeeeccccceeeeecCCce-----eeeecccccccCCcccccccCCeEEEEEC
Confidence 22222 2345567889999999998888889999999976422 2333 23455678999999999777654
Q ss_pred C-CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc-ccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 245 D-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 245 ~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
. ++.|.+|+. .++.+.++... .......+++.++|.+++ ++.++.|++|+.....
T Consensus 219 ~~~~~v~~f~~----------------~G~~~~~~~~~~~~~~p~~vav~~dG~l~V-~~~n~~v~~fr~~~~~ 275 (279)
T d1q7fa_ 219 HNNFNLTIFTQ----------------DGQLISALESKVKHAQCFDVALMDDGSVVL-ASKDYRLYIYRYVQLA 275 (279)
T ss_dssp SSSCEEEEECT----------------TSCEEEEEEESSCCSCEEEEEEETTTEEEE-EETTTEEEEEECSCCC
T ss_pred CCCcEEEEECC----------------CCCEEEEEeCCCCCCCEeEEEEeCCCcEEE-EeCCCeEEEEEeeeec
Confidence 3 457899873 12334444322 134578999999997555 5678999999987654
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=99.11 E-value=8.7e-08 Score=87.50 Aligned_cols=250 Identities=10% Similarity=-0.016 Sum_probs=141.7
Q ss_pred ccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCC-eEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe---CCCcEEEEEe
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG-QFECNATLEGHENEVKSVTWSKNGQFLATCS---RDKSVWVWEV 163 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~---~dg~i~vwd~ 163 (479)
.....+..|+|+|++++|+++.. +.+..|.+... ......... .......+.++++++.++... ..++|..+.+
T Consensus 37 ~~~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~-~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~ 114 (365)
T d1jofa_ 37 PQDEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHP-IGGHPRANDADTNTRAIFLLAAKQPPYAVYANPF 114 (365)
T ss_dssp CTTCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEE-CCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEE
T ss_pred cCCCCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeec-CCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEc
Confidence 34555677999999999988875 56777766532 222222222 233456778888887543332 2455655554
Q ss_pred CCCCcee-------------eeee-eeccccceeEEEEecCCCEEEEEEc-CCcEEEEecCCcccceEeeee--ecCCCc
Q psy14815 164 GEEDEYE-------------CAAV-INAHIQDVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWINFAT--LKSHTS 226 (479)
Q Consensus 164 ~~~~~~~-------------~~~~-~~~~~~~v~~l~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~--~~~~~~ 226 (479)
....... .... .......+.++.|+|+|+++++++. ...|.+|+....... ..... ......
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~-~~~~~~~~~~~g~ 193 (365)
T d1jofa_ 115 YKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV-ELVGSVDAPDPGD 193 (365)
T ss_dssp SSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE-EEEEEEECSSTTC
T ss_pred cCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCce-eeccceeecCCCC
Confidence 3221100 0000 0111223679999999998888764 347888876543321 11111 223456
Q ss_pred cEEEEEEccCCCEEEEee-CCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEe-------------ccccccEEEEEec
Q psy14815 227 TVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-------------GHHGRTIYDISWC 292 (479)
Q Consensus 227 ~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~i~~l~~~ 292 (479)
....++|+|+++++++.. .+++|.+|++....... ........ .........+.++
T Consensus 194 gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 263 (365)
T d1jofa_ 194 HPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMP----------VYTHHSFPLIPPGIPDRDPETGKGLYRADVCALT 263 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE----------EEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEEC
T ss_pred ceEEEEECCCCceEEEeccCCCEEEEEEecCCCceE----------EEEeeeeccccccccccccccccccCCccceEEC
Confidence 788999999999886555 67899999986543211 01111111 0112346688999
Q ss_pred CCCCeEEEEeC------CCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecC-CCCCCCccc
Q psy14815 293 HLTDLIATACG------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP-VVPEPQKTN 354 (479)
Q Consensus 293 ~~~~~l~~~~~------dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~~~~ 354 (479)
|+|++|+++.. .+.|..|++..... ......+... ........+++++| +|++|..+.
T Consensus 264 pdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~---~~~~~~~~~~-~~~G~~p~~i~~~p~~G~~l~va~ 328 (365)
T d1jofa_ 264 FSGKYMFASSRANKFELQGYIAGFKLRDCGS---IEKQLFLSPT-PTSGGHSNAVSPCPWSDEWMAITD 328 (365)
T ss_dssp TTSSEEEEEEEESSTTSCCEEEEEEECTTSC---EEEEEEEEEC-SSCCTTCCCEEECTTCTTEEEEEC
T ss_pred CCCCEEEEEcccCCCccceEEEEEEecCCCc---eeeEeEeeEE-EcCCCCccEEEecCCCCCEEEEEe
Confidence 99999887743 22377777665320 0001111111 12334567899998 788875543
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=99.08 E-value=1.7e-08 Score=90.10 Aligned_cols=236 Identities=11% Similarity=0.097 Sum_probs=144.1
Q ss_pred cEEEEEECCCCCEEEEEEC-------CCeEEEEECCCCeEEEeEEE--eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy14815 92 TIRETAWSPCGNFIASASF-------DATTAVWDKRSGQFECNATL--EGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 162 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~-------dg~i~iwd~~~~~~~~~~~~--~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd 162 (479)
....++|.++|++.++... +|+|..||..+++....... ....+....+.|.++++.++++...+.+..++
T Consensus 19 g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~~ 98 (314)
T d1pjxa_ 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQ 98 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred CCeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEEe
Confidence 4566789999987776432 46799999988863322211 11123467899999999888888777788888
Q ss_pred eCCCCceeeeeeeecc-ccceeEEEEecCCCEEEEEEc---------------CCcEEEEecCCcccceEeeeeecCCCc
Q psy14815 163 VGEEDEYECAAVINAH-IQDVKKVRFHPFDNILASASY---------------DDTVKLFKEDKAEADWINFATLKSHTS 226 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~~~~~---------------dg~i~i~d~~~~~~~~~~~~~~~~~~~ 226 (479)
..............+. -...+.+++.++|++.++-.. .|.|..++... + ...+.....
T Consensus 99 ~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg-~-----~~~~~~~~~ 172 (314)
T d1pjxa_ 99 TDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG-Q-----MIQVDTAFQ 172 (314)
T ss_dssp TTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS-C-----EEEEEEEES
T ss_pred CCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeecC-c-----eeEeeCCcc
Confidence 7664211111111111 113578999999988776432 23344444332 1 111111223
Q ss_pred cEEEEEEccCCC-----EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEE
Q psy14815 227 TVWSLAFDRIGS-----RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA 301 (479)
Q Consensus 227 ~v~~~~~~~~~~-----~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~ 301 (479)
..+.++|+++++ ++++-+..+.|..||+...... ...+....+.+........+++..+|+++++.
T Consensus 173 ~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~---------~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~ 243 (314)
T d1pjxa_ 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKI---------ENKKVWGHIPGTHEGGADGMDFDEDNNLLVAN 243 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEE---------EEEEEEEECCCCSSCEEEEEEEBTTCCEEEEE
T ss_pred eeeeeEECCCCCcceeEEEEEeecccceEEeeccCcccc---------ceeeEEEEccccccccceeeEEecCCcEEEEE
Confidence 346789998765 3445567788999987543221 11122223333223345689999999988888
Q ss_pred eCCCeEEEcccCCCCCCCCceeeEEEeccccccccceeEEEecCCCCCCCc
Q psy14815 302 CGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 302 ~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~ 352 (479)
...+.|.+|+.+.+. +..........+++++|.||++.|..
T Consensus 244 ~~~g~I~~~dp~~g~----------~~~~i~~p~~~~t~~afg~d~~~lyV 284 (314)
T d1pjxa_ 244 WGSSHIEVFGPDGGQ----------PKMRIRCPFEKPSNLHFKPQTKTIFV 284 (314)
T ss_dssp ETTTEEEEECTTCBS----------CSEEEECSSSCEEEEEECTTSSEEEE
T ss_pred cCCCEEEEEeCCCCE----------EEEEEECCCCCEEEEEEeCCCCEEEE
Confidence 888999999988765 21111233456789999999986644
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=99.04 E-value=3.1e-07 Score=81.73 Aligned_cols=251 Identities=9% Similarity=0.038 Sum_probs=149.8
Q ss_pred cceEEEEECCCCCeEEEeeC-------CCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEE
Q psy14815 12 GRVWNVSWNPQGTMISSCGE-------DKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAI 84 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~-------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~ 84 (479)
.....++|.|+|+++++... +|+|..||..++...... ..
T Consensus 18 ~g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~----------------------~~----------- 64 (314)
T d1pjxa_ 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVIC----------------------KP----------- 64 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEE----------------------CC-----------
T ss_pred CCCeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEE----------------------CC-----------
Confidence 34567899999997776432 356777776544321110 00
Q ss_pred eccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCC---CcEEEEEEcCCCCEEEEEeCC------
Q psy14815 85 LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHE---NEVKSVTWSKNGQFLATCSRD------ 155 (479)
Q Consensus 85 ~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~---~~v~~l~~~~~~~~l~~~~~d------ 155 (479)
...........++|.++++.++++...+.|...+...+... ........ .....+.+.++|++.++-...
T Consensus 65 ~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~~~~g~~~~-~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~ 143 (314)
T d1pjxa_ 65 EVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTDGTFEE-IAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPAD 143 (314)
T ss_dssp EETTEECCEEEEEECSSSSEEEEEETTTEEEEEETTSCEEE-CCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSC
T ss_pred ccccCCCcceeEEEeCCCCEEEEEECCCeEEEEeCCCcEEE-EEeccccccccCCCcEEEECCCCCEEEecCccCccccc
Confidence 00111234678999999998888888788999998766422 11111111 135779999999877764321
Q ss_pred -------CcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCC-----EEEEEEcCCcEEEEecCCcccc--eEeeeee
Q psy14815 156 -------KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-----ILASASYDDTVKLFKEDKAEAD--WINFATL 221 (479)
Q Consensus 156 -------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-----~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~ 221 (479)
..-++|-+....... .+...-..-+.++|+|+++ +.++-+..+.|..||+...... ......+
T Consensus 144 ~~~~~~~~~G~v~~~~~dg~~~---~~~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~ 220 (314)
T d1pjxa_ 144 YTRSMQEKFGSIYCFTTDGQMI---QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHI 220 (314)
T ss_dssp CCBTTSSSCEEEEEECTTSCEE---EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEEC
T ss_pred ccceeccCCceEEEEeecCcee---EeeCCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEc
Confidence 112344443322111 1112223346799998764 4455567788999987643211 1111222
Q ss_pred cC-CCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCC-eEE
Q psy14815 222 KS-HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIA 299 (479)
Q Consensus 222 ~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~ 299 (479)
.. .......+++..+|+..++....+.|.+||...... ...+... ....++++|.|+++ +++
T Consensus 221 ~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~~---------------~~~i~~p-~~~~t~~afg~d~~~lyV 284 (314)
T d1pjxa_ 221 PGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQP---------------KMRIRCP-FEKPSNLHFKPQTKTIFV 284 (314)
T ss_dssp CCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSC---------------SEEEECS-SSCEEEEEECTTSSEEEE
T ss_pred cccccccceeeEEecCCcEEEEEcCCCEEEEEeCCCCEE---------------EEEEECC-CCCEEEEEEeCCCCEEEE
Confidence 22 233456899999999888877889999998643221 2333332 45688999999987 556
Q ss_pred EEeCCCeEEEcccCCC
Q psy14815 300 TACGDDAIRIFKENPE 315 (479)
Q Consensus 300 ~~~~dg~i~vw~~~~~ 315 (479)
+.+.+|.|.-+++...
T Consensus 285 t~~~~g~i~~~~~~~~ 300 (314)
T d1pjxa_ 285 TEHENNAVWKFEWQRN 300 (314)
T ss_dssp EETTTTEEEEEECSSC
T ss_pred EECCCCcEEEEECCCC
Confidence 6677788887776543
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.03 E-value=1.1e-07 Score=82.74 Aligned_cols=223 Identities=14% Similarity=0.103 Sum_probs=128.1
Q ss_pred ccccccccceEEEEECCCCCeEEEeeCC-Cc--EEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceee
Q psy14815 5 QTLKGHQGRVWNVSWNPQGTMISSCGED-KN--IRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTA 81 (479)
Q Consensus 5 ~~l~~h~~~V~~l~~s~~~~~l~t~~~d-g~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 81 (479)
+.+..+...+..-+|||||+.||-.... +. +.+.+...+...
T Consensus 32 ~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~----------------------------------- 76 (269)
T d2hqsa1 32 FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR----------------------------------- 76 (269)
T ss_dssp EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-----------------------------------
T ss_pred EEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCcee-----------------------------------
Confidence 3444566778889999999999866433 22 333333222110
Q ss_pred eEEeccccCCcEEEEEECCCCCEEEEEECC-Ce--EEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEE-eCCCc
Q psy14815 82 KAILSDGHQRTIRETAWSPCGNFIASASFD-AT--TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC-SRDKS 157 (479)
Q Consensus 82 ~~~~~~~~~~~v~~v~~~~~~~~l~t~~~d-g~--i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~ 157 (479)
....+........|+|+|..++..... +. +..+...... ...............+++++..++.. ..+|.
T Consensus 77 ---~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 150 (269)
T d2hqsa1 77 ---QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ---IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGR 150 (269)
T ss_dssp ---EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC---EEECCCCSSCEEEEEECTTSSEEEEEECTTSS
T ss_pred ---EEeeeecccccceecCCCCeeeEeeecCCccceeeccccccc---ceeeeeccccccccccccccccceecccccCC
Confidence 113456777889999999988876643 22 3333333332 22223344455566777777654444 44555
Q ss_pred EE--EEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCC-cEEEEecCCcccceEeeeeecCCCccEEEEEEc
Q psy14815 158 VW--VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD-TVKLFKEDKAEADWINFATLKSHTSTVWSLAFD 234 (479)
Q Consensus 158 i~--vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~ 234 (479)
.. ..++.... ...............|+|+++.++..+.++ ...+|....... ......+........|+
T Consensus 151 ~~i~~~~~~~~~----~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~p~~S 222 (269)
T d2hqsa1 151 PQVYKVNINGGA----PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG----GVQVLSSTFLDETPSLA 222 (269)
T ss_dssp CEEEEEETTSSC----CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTC----CEEECCCSSSCEEEEEC
T ss_pred ceEeeeeccccc----ceeeecccccccccccccccceeEEEeecCCceeeeEeecccc----cceEeecCccccceEEC
Confidence 44 44544432 222334455667789999999888776554 444443332222 11223345556788999
Q ss_pred cCCCEEEEeeC---CCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecC
Q psy14815 235 RIGSRLATCSD---DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 293 (479)
Q Consensus 235 ~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~ 293 (479)
|||+.|+..+. ...|.++++.... ...+... ...+...+|+|
T Consensus 223 PDG~~i~f~s~~~~~~~l~~~~~dg~~----------------~~~lt~~-~g~~~~p~WSP 267 (269)
T d2hqsa1 223 PNGTMVIYSSSQGMGSVLNLVSTDGRF----------------KARLPAT-DGQVKFPAWSP 267 (269)
T ss_dssp TTSSEEEEEEEETTEEEEEEEETTSCC----------------EEECCCS-SSEEEEEEECC
T ss_pred CCCCEEEEEEcCCCCcEEEEEECCCCC----------------EEEEeCC-CCcEEeEEeCC
Confidence 99999875443 3467888874321 2233333 55677888988
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=99.02 E-value=5.3e-07 Score=80.45 Aligned_cols=234 Identities=9% Similarity=-0.003 Sum_probs=139.6
Q ss_pred ceEEEEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCc
Q psy14815 13 RVWNVSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRT 92 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 92 (479)
.+..++|.++|++.++-...++|..|+.++++....+ ......
T Consensus 41 ~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~-------------------------------------~~~~~~ 83 (319)
T d2dg1a1 41 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF-------------------------------------VSHKAN 83 (319)
T ss_dssp CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE-------------------------------------ECSSSS
T ss_pred CcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEE-------------------------------------eCCCCC
Confidence 3468899999987777667788887776543321111 123346
Q ss_pred EEEEEECCCCCEEEEEEC----CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC------CcEEEEE
Q psy14815 93 IRETAWSPCGNFIASASF----DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD------KSVWVWE 162 (479)
Q Consensus 93 v~~v~~~~~~~~l~t~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d------g~i~vwd 162 (479)
...++++++|+++++... .+.+...+..++.......-..-......+.+.++|++.++.... +.+..++
T Consensus 84 p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~ 163 (319)
T d2dg1a1 84 PAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVS 163 (319)
T ss_dssp EEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEEC
T ss_pred eeEEEECCCCCEEEEecCCCccceeEEEEcCCCceeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEe
Confidence 788999999988776543 234555566555422211111123457889999999866654321 2244444
Q ss_pred eCCCCceeeeeeeeccccceeEEEEecCCCEEE-EEEcCCcEEEEecCCcccceEe----eeeecCCCccEEEEEEccCC
Q psy14815 163 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILA-SASYDDTVKLFKEDKAEADWIN----FATLKSHTSTVWSLAFDRIG 237 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~ 237 (479)
.... .+..+...-...+.++|+|+++.|. +-+..+.|..|++......... .............++++++|
T Consensus 164 ~dg~----~~~~~~~~~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G 239 (319)
T d2dg1a1 164 PDFR----TVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDD 239 (319)
T ss_dssp TTSC----CEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTC
T ss_pred cccc----eeEEEeeccceeeeeeeccccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCC
Confidence 3332 1122222223457899999998664 4456789999998643221111 11111222345689999999
Q ss_pred CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc-----ccccEEEEEecCCCCeEEEEeC
Q psy14815 238 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-----HGRTIYDISWCHLTDLIATACG 303 (479)
Q Consensus 238 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~l~~~~~~~~l~~~~~ 303 (479)
+..++....+.|.+||. .+ +.+..+... +...+++++|.++...+++...
T Consensus 240 ~l~Va~~~~g~V~~~~p-~G---------------~~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~~ 294 (319)
T d2dg1a1 240 NLYVAMYGQGRVLVFNK-RG---------------YPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN 294 (319)
T ss_dssp CEEEEEETTTEEEEECT-TS---------------CEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred CEEEEEcCCCEEEEECC-CC---------------cEEEEEeCCCcCCCcCceeeeEEEeCCCCEEEEEcC
Confidence 98888888999999984 22 334444321 1335789999988776665543
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.96 E-value=1.1e-07 Score=82.26 Aligned_cols=225 Identities=9% Similarity=0.011 Sum_probs=140.1
Q ss_pred CCcEEEEEECCCCCEEEEEE-CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCc
Q psy14815 90 QRTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 168 (479)
......+++.++|...++.. ..+.+..++..... .......+ ......++++++++.+++....+.+++++-...
T Consensus 13 ~~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~-~~~~~~~~-~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~-- 88 (260)
T d1rwia_ 13 RLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTG-TTVLPFNG-LYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNN-- 88 (260)
T ss_dssp CCCEEEEEECTTCCEEEEECSSSCEEEEEC----C-EEECCCCS-CCSCCCEEECTTCCEEEEETTTEEEEECTTCSC--
T ss_pred cCCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCce-EEEeccCC-ccCceEEEEcCCCCEEEeeeeeceeeeeeeccc--
Confidence 34568999999998766654 45677777665442 11222222 234578899999987776666666665544333
Q ss_pred eeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCe
Q psy14815 169 YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 248 (479)
Q Consensus 169 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~ 248 (479)
....... ......++++.++++++++-..+..+..++...... ..... ........++++++++.+++...++.
T Consensus 89 -~~~~~~~-~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~---~~~~~-~~~~~p~~i~~~~~g~~~v~~~~~~~ 162 (260)
T d1rwia_ 89 -QTVLPFD-GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ---TVLPF-TGLNDPDGVAVDNSGNVYVTDTDNNR 162 (260)
T ss_dssp -CEECCCC-SCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSC---EECCC-CSCCSCCEEEECTTCCEEEEEGGGTE
T ss_pred -eeeeeee-eeeecccccccccceeEeecccccccccccccccee---eeeee-cccCCcceeeecCCCCEeeecccccc
Confidence 2222221 224468899999999888776777788887765432 11111 12234568899999998888888888
Q ss_pred EEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEEEe
Q psy14815 249 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVH 328 (479)
Q Consensus 249 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~ 328 (479)
|..++..... ...+..........+++.++|.++++....+.|..++..... ..
T Consensus 163 i~~~d~~~~~----------------~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~----------~~ 216 (260)
T d1rwia_ 163 VVKLEAESNN----------------QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT----------ST 216 (260)
T ss_dssp EEEECTTTCC----------------EEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSC----------CE
T ss_pred ccccccccce----------------eeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCe----------EE
Confidence 9999864321 112221123456889999999988888888888888766543 11
Q ss_pred ccccccccceeEEEecCCCCCC
Q psy14815 329 TEHRAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 329 ~~~~~h~~~v~~~~~sp~~~~l 350 (479)
......-.....++++++|...
T Consensus 217 ~~~~~~~~~P~~i~~d~~g~l~ 238 (260)
T d1rwia_ 217 VLPFTGLNTPLAVAVDSDRTVY 238 (260)
T ss_dssp ECCCCSCCCEEEEEECTTCCEE
T ss_pred EEccCCCCCeEEEEEeCCCCEE
Confidence 1111223456789999988643
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.93 E-value=1.1e-06 Score=78.26 Aligned_cols=237 Identities=8% Similarity=0.029 Sum_probs=143.3
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC--Cc--EEEEEeCC
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD--KS--VWVWEVGE 165 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d--g~--i~vwd~~~ 165 (479)
...+..++|.++|++.++-...+.|..|+..+++. ...+.........++++++|+++++...+ .. +...+...
T Consensus 39 ~~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~--~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~ 116 (319)
T d2dg1a1 39 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEI--KRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG 116 (319)
T ss_dssp CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCE--EEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS
T ss_pred CcCcEeCEECCCCCEEEEECCCCEEEEEECCCCeE--EEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCC
Confidence 34567899999999777777889999999887752 23333445678899999999877765432 23 44444443
Q ss_pred CCceeeeeeeeccccceeEEEEecCCCEEEEEEc------CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCE
Q psy14815 166 EDEYECAAVINAHIQDVKKVRFHPFDNILASASY------DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 166 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 239 (479)
........ -..-....+.+++.++|++.++... .+.+..++..... +..+...-...+.++|+|+++.
T Consensus 117 ~~~~~~~~-~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~-----~~~~~~~~~~pnGia~s~dg~~ 190 (319)
T d2dg1a1 117 DNLQDIIE-DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT-----VTPIIQNISVANGIALSTDEKV 190 (319)
T ss_dssp CSCEEEEC-SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC-----EEEEEEEESSEEEEEECTTSSE
T ss_pred ceeeeecc-CCCcccCCcceeEEeccceeecccccccccCcceeEEEecccce-----eEEEeeccceeeeeeeccccce
Confidence 32111111 1111234678999999987666432 1235555544322 1111122234578999999987
Q ss_pred EE-EeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCC
Q psy14815 240 LA-TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 318 (479)
Q Consensus 240 l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 318 (479)
|+ +-+..+.|..|++........ ........... .......+++.++|.+.++....+.|.+|+-+ ++
T Consensus 191 lyvad~~~~~I~~~d~~~~g~~~~-------~~~~~~~~~~~-~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p~-G~-- 259 (319)
T d2dg1a1 191 LWVTETTANRLHRIALEDDGVTIQ-------PFGATIPYYFT-GHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GY-- 259 (319)
T ss_dssp EEEEEGGGTEEEEEEECTTSSSEE-------EEEEEEEEECC-SSSEEEEEEEBTTCCEEEEEETTTEEEEECTT-SC--
T ss_pred EEEecccCCceEEEEEcCCCceec-------cccceeeeccC-CccceeeeeEcCCCCEEEEEcCCCEEEEECCC-Cc--
Confidence 64 445678999999854432110 00011111111 12345679999999988888889999999964 44
Q ss_pred CCceeeEEEeccc-----cccccceeEEEecCCCCCCCc
Q psy14815 319 SDMVSFDLVHTEH-----RAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 319 ~~~~~~~~~~~~~-----~~h~~~v~~~~~sp~~~~l~~ 352 (479)
.+..+. .++...+++++|.|++..+..
T Consensus 260 -------~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~ 291 (319)
T d2dg1a1 260 -------PIGQILIPGRDEGHMLRSTHPQFIPGTNQLII 291 (319)
T ss_dssp -------EEEEEECTTGGGTCSCBCCEEEECTTSCEEEE
T ss_pred -------EEEEEeCCCcCCCcCceeeeEEEeCCCCEEEE
Confidence 232221 134456789999998776543
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.75 E-value=2.5e-07 Score=87.14 Aligned_cols=146 Identities=12% Similarity=0.143 Sum_probs=93.8
Q ss_pred EEECCCCCeEEEeeCCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEE
Q psy14815 17 VSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 96 (479)
Q Consensus 17 l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v 96 (479)
..|.+++.++.. ..+|.|.+||+.+++....+. .. .-....+...
T Consensus 22 ~~W~~~~~~~~~-~~~g~i~~~~~~~~~~~~l~~---------------------~~-------------~~~~~~~~~~ 66 (465)
T d1xfda1 22 AKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIE---------------------GK-------------KIESLRAIRY 66 (465)
T ss_dssp CCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEEC---------------------TT-------------TTTTTTCSEE
T ss_pred CEEeCCCcEEEE-eCCCcEEEEECCCCCEEEEEc---------------------Cc-------------ccccccccee
Confidence 468888876654 457789999887765422221 00 1122355667
Q ss_pred EECCCCCEEEEEE---------CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCC
Q psy14815 97 AWSPCGNFIASAS---------FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 167 (479)
Q Consensus 97 ~~~~~~~~l~t~~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~ 167 (479)
.||||+++++... ..+.+.++|+.+++...+.........+....|||||+.++-.. ++.+.+.+..++.
T Consensus 67 ~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~ 145 (465)
T d1xfda1 67 EISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQ 145 (465)
T ss_dssp EECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSC
T ss_pred EECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCCccccceeeeccCCceEEEEe-cceEEEEecCCCc
Confidence 8999999988764 35788999999987544433333445566789999999988764 5778887776654
Q ss_pred ceeeeee------eeccc---------cceeEEEEecCCCEEEEEE
Q psy14815 168 EYECAAV------INAHI---------QDVKKVRFHPFDNILASAS 198 (479)
Q Consensus 168 ~~~~~~~------~~~~~---------~~v~~l~~~~~~~~l~~~~ 198 (479)
..+.... +.+.. ..-..+-|||||+.|+...
T Consensus 146 ~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~ 191 (465)
T d1xfda1 146 AIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (465)
T ss_dssp CEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred eEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEE
Confidence 3222211 11111 1124678999999999875
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.72 E-value=1.2e-05 Score=69.85 Aligned_cols=224 Identities=10% Similarity=0.073 Sum_probs=142.3
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC------CCCcEEEEEEcCCCC-EEEEE-eCCCcEEEEE
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG------HENEVKSVTWSKNGQ-FLATC-SRDKSVWVWE 162 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~------~~~~v~~l~~~~~~~-~l~~~-~~dg~i~vwd 162 (479)
.....++++++++.+++-..+..|++||.+ ++ .+..+.. .......+.+.++.. .+++. +.++.|..++
T Consensus 23 ~~P~gvavd~dg~i~VaD~~n~rI~v~d~~-G~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~ 99 (279)
T d1q7fa_ 23 TEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GR--FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 99 (279)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECTT-SC--EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred CCccEEEEcCCCCEEEEECCCCEEEEEeCC-CC--EEEEecccCCCcccccccccccccccccccceeccCCcccccccc
Confidence 457899999999988887778899999976 44 2333321 112345566655443 33333 3345676666
Q ss_pred eCCCCceeeeeee-eccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE
Q psy14815 163 VGEEDEYECAAVI-NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 241 (479)
Q Consensus 163 ~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 241 (479)
.... ....+ .........+++.++++++++....+.+.+++...... .......+......+++.++++.++
T Consensus 100 ~~g~----~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g~~~---~~~g~~~~~~~~~~i~~d~~g~i~v 172 (279)
T d1q7fa_ 100 QYGQ----FVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVL---HKFGCSKHLEFPNGVVVNDKQEIFI 172 (279)
T ss_dssp TTSC----EEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEE---EEEECTTTCSSEEEEEECSSSEEEE
T ss_pred cccc----ceeecCCCcccccceeccccCCcEEEEeeccceeeEeccCCcee---ecccccccccccceeeeccceeEEe
Confidence 5432 22222 22334567899999999888877778888888653221 1112244667788999999998888
Q ss_pred EeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEecc-ccccEEEEEecCCCCeEEEEeC-CCeEEEcccCCCCCCC
Q psy14815 242 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGRTIYDISWCHLTDLIATACG-DDAIRIFKENPEAGDS 319 (479)
Q Consensus 242 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~-dg~i~vw~~~~~~~~~ 319 (479)
+....+.|++||.. ++.+.++... .......+++.++|+++++-+. ++.|.+|+.+ ++
T Consensus 173 ~d~~~~~V~~~d~~----------------G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~~-G~--- 232 (279)
T d1q7fa_ 173 SDNRAHCVKVFNYE----------------GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQ--- 232 (279)
T ss_dssp EEGGGTEEEEEETT----------------CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SC---
T ss_pred eeccccceeeeecC----------------CceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECCC-CC---
Confidence 88888999999852 1234444221 2445788999999997776544 4579999854 33
Q ss_pred CceeeEEEeccc-cccccceeEEEecCCCCCC
Q psy14815 320 DMVSFDLVHTEH-RAHNQDVNCVAWNPVVPEP 350 (479)
Q Consensus 320 ~~~~~~~~~~~~-~~h~~~v~~~~~sp~~~~l 350 (479)
++..+. .........+++.|||.++
T Consensus 233 ------~~~~~~~~~~~~~p~~vav~~dG~l~ 258 (279)
T d1q7fa_ 233 ------LISALESKVKHAQCFDVALMDDGSVV 258 (279)
T ss_dssp ------EEEEEEESSCCSCEEEEEEETTTEEE
T ss_pred ------EEEEEeCCCCCCCEeEEEEeCCCcEE
Confidence 222221 1222356788999998654
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.70 E-value=7.1e-06 Score=76.95 Aligned_cols=286 Identities=9% Similarity=0.013 Sum_probs=145.9
Q ss_pred cceEEEEECCCCCeEEEeeC---------CCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeee
Q psy14815 12 GRVWNVSWNPQGTMISSCGE---------DKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 12 ~~V~~l~~s~~~~~l~t~~~---------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 82 (479)
-.+....||||+++++.... .+.+.++|+.++......
T Consensus 61 ~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~--------------------------------- 107 (465)
T d1xfda1 61 LRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLD--------------------------------- 107 (465)
T ss_dssp TTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECC---------------------------------
T ss_pred cccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeecc---------------------------------
Confidence 35677889999998877643 345566666554421110
Q ss_pred EEeccccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcE-----------------EEEEEcCC
Q psy14815 83 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEV-----------------KSVTWSKN 145 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v-----------------~~l~~~~~ 145 (479)
........+....|||||+.+|... ++.|.+.+..++....+ +..+..+.+ .++-||||
T Consensus 108 --~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~l-t~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPD 183 (465)
T d1xfda1 108 --PPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRV-VSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPD 183 (465)
T ss_dssp --CTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEE-ECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTT
T ss_pred --CccCCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEE-ecccCcceeeccccchhhhhhhccccceEEECCC
Confidence 0112234455678999999999887 57888888877653222 212211111 47789999
Q ss_pred CCEEEEEeCC-CcE---------------------------------EEEEeCCCCceeeeee---eeccccceeEEEEe
Q psy14815 146 GQFLATCSRD-KSV---------------------------------WVWEVGEEDEYECAAV---INAHIQDVKKVRFH 188 (479)
Q Consensus 146 ~~~l~~~~~d-g~i---------------------------------~vwd~~~~~~~~~~~~---~~~~~~~v~~l~~~ 188 (479)
|++|+....| ..| .++|+.++........ ......-+..+.|+
T Consensus 184 gk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~ 263 (465)
T d1xfda1 184 GTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWA 263 (465)
T ss_dssp SSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEES
T ss_pred CCeEEEEEecccccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEc
Confidence 9999887532 223 3344433211000000 01112236778999
Q ss_pred cCCCEEEEEEc-C---CcEEEEecCCcccceEeeeeecCCCcc----EEEEEEccCCCEEEE--ee-CCC--eEEEEecc
Q psy14815 189 PFDNILASASY-D---DTVKLFKEDKAEADWINFATLKSHTST----VWSLAFDRIGSRLAT--CS-DDA--TVKIWKEY 255 (479)
Q Consensus 189 ~~~~~l~~~~~-d---g~i~i~d~~~~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~s--~~-~dg--~i~iwd~~ 255 (479)
|++++++.... + ..+.++|..++... .+.... .... -....|+++|+.++. .+ .+| .+....+.
T Consensus 264 ~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~--~~~~e~-~~~wv~~~~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~~~ 340 (465)
T d1xfda1 264 TSTKVAVTWLNRAQNVSILTLCDATTGVCT--KKHEDE-SEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVS 340 (465)
T ss_dssp SSSEEEEEEEETTSCEEEEEEEETTTCCEE--EEEEEE-CSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEE
T ss_pred CCCeEEEEEEccccccceEEEEcCCCCcEE--EEEEEc-CCceEeccCCceeEccCCCeeEEEEeeeecccCceEEEEec
Confidence 99886665433 2 24788888877642 121111 1111 134578999985432 22 232 34444432
Q ss_pred CCCCCCCCCCCCCCCceEEEEEEeccccccEEEE-EecCCCCeEE-EEeCC--CeEEEcccCCCCCCCCceeeEEEeccc
Q psy14815 256 KPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI-SWCHLTDLIA-TACGD--DAIRIFKENPEAGDSDMVSFDLVHTEH 331 (479)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l-~~~~~~~~l~-~~~~d--g~i~vw~~~~~~~~~~~~~~~~~~~~~ 331 (479)
..... ........+... .-.|..+ +|+++++.+. ++..+ +.-++|.+....... ..|+ +..
T Consensus 341 ~~~~~---------~~~~~~~~LT~G-~w~V~~i~~~d~~~~~vyF~a~~~~p~~~hly~v~l~g~~~----~~~l-t~~ 405 (465)
T d1xfda1 341 SSQPN---------SSNDNIQSITSG-DWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFN----RQCL-SCD 405 (465)
T ss_dssp CSSCC---------SSSCCCCBSCCS-SSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCC----CBCS-STT
T ss_pred ccccc---------CCCceeEEeccC-CceEEEEEEEcCCCCEEEEEEeCCCCCceEEEEEECCCCCc----ceee-ccc
Confidence 11100 000011112211 3344443 5777766543 44433 233455554321100 0011 111
Q ss_pred cccccceeEEEecCCCCCCCc
Q psy14815 332 RAHNQDVNCVAWNPVVPEPQK 352 (479)
Q Consensus 332 ~~h~~~v~~~~~sp~~~~l~~ 352 (479)
........++.|||+++++..
T Consensus 406 ~~~~~~~~~~~~S~~~~y~v~ 426 (465)
T d1xfda1 406 LVENCTYFSASFSHSMDFFLL 426 (465)
T ss_dssp SSSSCCCCEEEECTTSSEEEE
T ss_pred cCCCCCEEEEEECCCCCEEEE
Confidence 233445779999999998754
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.66 E-value=4.4e-05 Score=66.71 Aligned_cols=188 Identities=11% Similarity=0.008 Sum_probs=120.4
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCC--CCcEEEEEEcCCCCEEEEEeC----CCcEEEEEe
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGH--ENEVKSVTWSKNGQFLATCSR----DKSVWVWEV 163 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~v~~l~~~~~~~~l~~~~~----dg~i~vwd~ 163 (479)
...+.++++.+++.++++ +. ..+..+|..+++...+...... ...+..+.+.|+|++.++... .+.-.+|.+
T Consensus 58 ~~~~~~i~~~~dg~l~va-~~-~gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~ 135 (295)
T d2ghsa1 58 PFMGSALAKISDSKQLIA-SD-DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHV 135 (295)
T ss_dssp SSCEEEEEEEETTEEEEE-ET-TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEE
T ss_pred CCCcEEEEEecCCCEEEE-Ee-CccEEeecccceeeEEeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEeee
Confidence 356788999888866665 44 4699999999975443332221 235788999999986665543 234566777
Q ss_pred CCCCceeeeeeeeccccceeEEEEecCCCEEEE-EEcCCcEEEEecCCccc----ceEeeeeecCCCccEEEEEEccCCC
Q psy14815 164 GEEDEYECAAVINAHIQDVKKVRFHPFDNILAS-ASYDDTVKLFKEDKAEA----DWINFATLKSHTSTVWSLAFDRIGS 238 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~-~~~dg~i~i~d~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~ 238 (479)
..++ ..... ..-...+.++|+++++.+.. -+..+.|..|++..... ............+....+++..+|+
T Consensus 136 ~~g~---~~~~~-~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~Gn 211 (295)
T d2ghsa1 136 AKGK---VTKLF-ADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH 211 (295)
T ss_dssp ETTE---EEEEE-EEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC
T ss_pred cCCc---EEEEe-eccCCcceeeecCCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCC
Confidence 6552 22222 22234578999999886554 45678899998753221 1112233344556678999999998
Q ss_pred EEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEec-CCCCeEEE
Q psy14815 239 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC-HLTDLIAT 300 (479)
Q Consensus 239 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~~l~~ 300 (479)
..++.-..+.|..||. .++.+..+.-. ...+++++|- ++.+.|..
T Consensus 212 lWva~~~~g~V~~~dp----------------~G~~~~~i~lP-~~~~T~~~FGG~d~~~Lyv 257 (295)
T d2ghsa1 212 IWNARWGEGAVDRYDT----------------DGNHIARYEVP-GKQTTCPAFIGPDASRLLV 257 (295)
T ss_dssp EEEEEETTTEEEEECT----------------TCCEEEEEECS-CSBEEEEEEESTTSCEEEE
T ss_pred EEeeeeCCCceEEecC----------------CCcEeeEecCC-CCceEEEEEeCCCCCEEEE
Confidence 8777767788999984 22445555553 4568999996 66554443
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.52 E-value=0.00011 Score=64.08 Aligned_cols=228 Identities=10% Similarity=0.045 Sum_probs=140.1
Q ss_pred EEEECCCCCEEE-EEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceeeee
Q psy14815 95 ETAWSPCGNFIA-SASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA 173 (479)
Q Consensus 95 ~v~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 173 (479)
+..|++....|. +=-..+.|.-||..+++.. .+. ....+.++.+.+++.++++ +.+ .+..+|..+++. ..+.
T Consensus 22 gp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~---~~~-~~~~~~~i~~~~dg~l~va-~~~-gl~~~d~~tg~~-~~l~ 94 (295)
T d2ghsa1 22 GPTFDPASGTAWWFNILERELHELHLASGRKT---VHA-LPFMGSALAKISDSKQLIA-SDD-GLFLRDTATGVL-TLHA 94 (295)
T ss_dssp EEEEETTTTEEEEEEGGGTEEEEEETTTTEEE---EEE-CSSCEEEEEEEETTEEEEE-ETT-EEEEEETTTCCE-EEEE
T ss_pred CCeEECCCCEEEEEECCCCEEEEEECCCCeEE---EEE-CCCCcEEEEEecCCCEEEE-EeC-ccEEeeccccee-eEEe
Confidence 456887544444 4345789999999998632 222 2456889999988876654 454 588899887642 2221
Q ss_pred eeec--cccceeEEEEecCCCEEEEEEcC----CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE-EeeCC
Q psy14815 174 VINA--HIQDVKKVRFHPFDNILASASYD----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA-TCSDD 246 (479)
Q Consensus 174 ~~~~--~~~~v~~l~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~d 246 (479)
.... ....++.+.+.|+|++.++.... +.-.+|.+..++. ..+...-...+.++|+++++.++ +-+..
T Consensus 95 ~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~-----~~~~~~~~~~Ng~~~s~d~~~l~~~dt~~ 169 (295)
T d2ghsa1 95 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKV-----TKLFADISIPNSICFSPDGTTGYFVDTKV 169 (295)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEE-----EEEEEEESSEEEEEECTTSCEEEEEETTT
T ss_pred eeecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcE-----EEEeeccCCcceeeecCCCceEEEeeccc
Confidence 1111 12347889999999877765432 3345666554432 11112223457899999998665 55567
Q ss_pred CeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCCCCCCceeeEE
Q psy14815 247 ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 326 (479)
Q Consensus 247 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~ 326 (479)
+.|..|++........ ..........+. ......+++..+|.+.++.-..+.|..||-+ ++ +
T Consensus 170 ~~I~~~~~d~~~~~~~-------~~~~~~~~~~~~-~g~pdG~~vD~~GnlWva~~~~g~V~~~dp~-G~---------~ 231 (295)
T d2ghsa1 170 NRLMRVPLDARTGLPT-------GKAEVFIDSTGI-KGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GN---------H 231 (295)
T ss_dssp CEEEEEEBCTTTCCBS-------SCCEEEEECTTS-SSEEEEEEECTTSCEEEEEETTTEEEEECTT-CC---------E
T ss_pred ceeeEeeecccccccc-------cceEEEeccCcc-cccccceEEcCCCCEEeeeeCCCceEEecCC-Cc---------E
Confidence 7898888754322111 011122223332 4567889999999988877778899999965 43 2
Q ss_pred EeccccccccceeEEEec-CCCCCCCcc
Q psy14815 327 VHTEHRAHNQDVNCVAWN-PVVPEPQKT 353 (479)
Q Consensus 327 ~~~~~~~h~~~v~~~~~s-p~~~~l~~~ 353 (479)
+..+ .-....+++++|- ||.+.|...
T Consensus 232 ~~~i-~lP~~~~T~~~FGG~d~~~LyvT 258 (295)
T d2ghsa1 232 IARY-EVPGKQTTCPAFIGPDASRLLVT 258 (295)
T ss_dssp EEEE-ECSCSBEEEEEEESTTSCEEEEE
T ss_pred eeEe-cCCCCceEEEEEeCCCCCEEEEE
Confidence 3332 2223568999996 787777544
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.30 E-value=0.00014 Score=62.63 Aligned_cols=67 Identities=13% Similarity=0.237 Sum_probs=44.7
Q ss_pred ccCCcEEEEEECCCCCEEEEEEC-C-----CeEEEEECCCCeEEEeEEE----eCCCCcEEEEEEcCCCCEEEEEeC
Q psy14815 88 GHQRTIRETAWSPCGNFIASASF-D-----ATTAVWDKRSGQFECNATL----EGHENEVKSVTWSKNGQFLATCSR 154 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~-d-----g~i~iwd~~~~~~~~~~~~----~~~~~~v~~l~~~~~~~~l~~~~~ 154 (479)
.+...+...+|||||+.||.... + ..|.+++..+++...+... ...........|+|+|+.++....
T Consensus 38 ~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 114 (281)
T d1k32a2 38 SNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDA 114 (281)
T ss_dssp CSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEECT
T ss_pred cCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEeeecCCCccCccccccccccCCCCCEEEEEEc
Confidence 34567788999999999987643 2 2477888888864333211 112234567889999998887543
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.17 E-value=0.0014 Score=55.21 Aligned_cols=226 Identities=11% Similarity=0.106 Sum_probs=140.4
Q ss_pred EEECCCCCeEEEeeCCCcEEEEecccccccccccCCCc-------cceEEEeecCCcEEEecCCCCCCceeeeEEecccc
Q psy14815 17 VSWNPQGTMISSCGEDKNIRLWVMVIREPYEKLHGLPV-------ETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGH 89 (479)
Q Consensus 17 l~~s~~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~-------~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 89 (479)
.-.+|..+.||.=+ ..+++|+|+++.+.++.+.-... +...+....+..+.-|+++....+.........-.
T Consensus 68 AIMhP~~~IiALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lVT~taVYHW~~~g~s~P~k~fdR~~~L~ 146 (327)
T d1utca2 68 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLA 146 (327)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEESSSSEEEEECSSEEEEEESSSSCCCEEEEECCGGGT
T ss_pred hhcCCCCcEEEEec-CCeEEEEehhHhhhhceEEcCCCcEEEEecCCCEEEEEcCCceEEEcccCCCCchhhhhhccccc
Confidence 44568788777665 55899999999999887765543 44566667788899999974333222222222223
Q ss_pred CCcEEEEEECCCCCEEEEEEC-------CCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCC---CEEEEEe---CCC
Q psy14815 90 QRTIRETAWSPCGNFIASASF-------DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG---QFLATCS---RDK 156 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~---~~l~~~~---~dg 156 (479)
...|..-..+++.++++..+- .|.+.+|..+.+ ..+.+++|......+.+..+. +.|+.+. ..+
T Consensus 147 ~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~---~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~ 223 (327)
T d1utca2 147 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK---VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGG 223 (327)
T ss_dssp TCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT---EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEE
T ss_pred CceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccC---cCccccceeeeeEEEEcCCCCCCceEEEEEECCCCCc
Confidence 467888888999998766532 378899999887 456778886544444433211 1333332 236
Q ss_pred cEEEEEeCCCCc-eee-----eeeee---ccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeecCCCcc
Q psy14815 157 SVWVWEVGEEDE-YEC-----AAVIN---AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST 227 (479)
Q Consensus 157 ~i~vwd~~~~~~-~~~-----~~~~~---~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 227 (479)
.+++.++..... ... ...+. ...+-.-++..++.-..+..-+.-|.+.+||+.++.. +..-+-....
T Consensus 224 kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~G~i~lyDleTgt~----i~~nRIs~~~ 299 (327)
T d1utca2 224 KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC----IYMNRISGET 299 (327)
T ss_dssp EEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCE----EEEEECCSSC
T ss_pred EEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEecCcEEEEEEcccccE----EEEeecCCCc
Confidence 788888876321 011 11111 1122345788888778899999999999999998875 3333334455
Q ss_pred EEEEEEccCCCEEEEeeCCCeEE
Q psy14815 228 VWSLAFDRIGSRLATCSDDATVK 250 (479)
Q Consensus 228 v~~~~~~~~~~~l~s~~~dg~i~ 250 (479)
|..-+-+.+..-++....+|.|.
T Consensus 300 iF~~a~~~~~~Gi~~VNr~GqVl 322 (327)
T d1utca2 300 IFVTAPHEATAGIIGVNRKGQVL 322 (327)
T ss_dssp EEEEEEETTTTEEEEEETTSEEE
T ss_pred eEEeccCCCCceEEEECCCCeEE
Confidence 55444444444455555666654
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.07 E-value=0.0002 Score=61.48 Aligned_cols=97 Identities=12% Similarity=0.129 Sum_probs=64.9
Q ss_pred ECCC--CCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC-CC-----cEEEEEeCCCCce
Q psy14815 98 WSPC--GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DK-----SVWVWEVGEEDEY 169 (479)
Q Consensus 98 ~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-dg-----~i~vwd~~~~~~~ 169 (479)
.+|+ |+.++..+ ++.|.+.|+.+++. ..+..+.+.+....|||||+.|+.... ++ .|.+++..+++..
T Consensus 6 ~sPdi~G~~v~f~~-~~dl~~~d~~~g~~---~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~ 81 (281)
T d1k32a2 6 LNPDIHGDRIIFVC-CDDLWEHDLKSGST---RKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIK 81 (281)
T ss_dssp EEEEEETTEEEEEE-TTEEEEEETTTCCE---EEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEE
T ss_pred cCCCCCCCEEEEEe-CCcEEEEECCCCCE---EEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceE
Confidence 5688 98888776 46799999999863 345556678899999999998886542 22 3666676665322
Q ss_pred eeeee---eeccccceeEEEEecCCCEEEEEE
Q psy14815 170 ECAAV---INAHIQDVKKVRFHPFDNILASAS 198 (479)
Q Consensus 170 ~~~~~---~~~~~~~v~~l~~~~~~~~l~~~~ 198 (479)
+.... ............|+|+++.|+...
T Consensus 82 ~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 113 (281)
T d1k32a2 82 RITYFSGKSTGRRMFTDVAGFDPDGNLIISTD 113 (281)
T ss_dssp ECCCCCEEEETTEECSEEEEECTTCCEEEEEC
T ss_pred EeeecCCCccCccccccccccCCCCCEEEEEE
Confidence 21111 011223456788999999888754
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.84 E-value=0.0085 Score=53.15 Aligned_cols=227 Identities=13% Similarity=0.084 Sum_probs=124.4
Q ss_pred CCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECC--CCCEEEEEECC------------------CeEEEEECCCCe
Q psy14815 64 DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP--CGNFIASASFD------------------ATTAVWDKRSGQ 123 (479)
Q Consensus 64 ~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~l~t~~~d------------------g~i~iwd~~~~~ 123 (479)
++.+.+.|++.+. ...+........+..+...+ +..+++..+.+ +.+.+.|..+.+
T Consensus 109 n~RVAvIdl~~fk----t~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t~ID~~tm~ 184 (459)
T d1fwxa2 109 NTRVARVRCDVMK----CDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWE 184 (459)
T ss_dssp TTEEEEEETTTTE----EEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEEEEETTTTE
T ss_pred CceEEEEECccee----eeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEEEEecCCce
Confidence 3456666665322 22222234455666666644 55677777663 246788999887
Q ss_pred EEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCC---------------cEEEE-----------------------EeCC
Q psy14815 124 FECNATLEGHENEVKSVTWSKNGQFLATCSRDK---------------SVWVW-----------------------EVGE 165 (479)
Q Consensus 124 ~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg---------------~i~vw-----------------------d~~~ 165 (479)
......+. +....+.++++|+++++.+.+. .+.++ |.+.
T Consensus 185 V~~QV~V~---g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eingV~VVD~~~ 261 (459)
T d1fwxa2 185 VAWQVLVS---GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRK 261 (459)
T ss_dssp EEEEEEES---SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSG
T ss_pred EEEEeeeC---CChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCCceeecccc
Confidence 44444443 3456889999999999887541 13333 3332
Q ss_pred CCceeeeeeeeccccceeEEEEecCCCEEEEEE-cCCcEEEEecCCcccce-------EeeeeecCCCccEEEEEEccCC
Q psy14815 166 EDEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADW-------INFATLKSHTSTVWSLAFDRIG 237 (479)
Q Consensus 166 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~ 237 (479)
.........+.. ......+.++|||+++++++ .+.++.++|+++-.... ..+..-....-.-..-+|+..|
T Consensus 262 ~~~~~v~~yIPV-pKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~elglgPLht~fd~~g 340 (459)
T d1fwxa2 262 EASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG 340 (459)
T ss_dssp G--CSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBCCSCEEEEEECTTS
T ss_pred cCCcceeEEEec-CCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeecccCcCccccccCCCc
Confidence 111111111211 22346789999999888766 57899999997532100 0011111123344567888888
Q ss_pred CEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEE----EecCCCCeEEEEeC
Q psy14815 238 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI----SWCHLTDLIATACG 303 (479)
Q Consensus 238 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l----~~~~~~~~l~~~~~ 303 (479)
.-..|.--|..|.-|++........ ....+..+..+..|..-.=... ...|+|++|++.+.
T Consensus 341 ~aytslfids~v~kw~~~~~~~~~~-----~~~~~~v~~k~~v~y~~gh~~~~~g~t~~~dgk~l~~~nk 405 (459)
T d1fwxa2 341 NAYTSLFLDSQVVKWNIEDAIRAYA-----GEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 405 (459)
T ss_dssp EEEEEETTTTEEEEEEHHHHHHHHH-----TCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred eEEEEeeccceEEEEecchhhhhhc-----cccCCcceeccccccCCCCCccCcCCcCCCCCCEEEEecc
Confidence 6666777899999999843210000 0011233444544311111111 23578999998853
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.80 E-value=0.0073 Score=50.97 Aligned_cols=201 Identities=9% Similarity=0.091 Sum_probs=122.2
Q ss_pred cCCcEEEEEECCCCCEEEEEE-CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEEeCCC
Q psy14815 89 HQRTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEE 166 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vwd~~~~ 166 (479)
+...+..++|.+..+.+.-.. .++.|...++..+.. ...+......+.++++..-+..|+.+. ..+.|.+.++...
T Consensus 34 ~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~--~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~ 111 (263)
T d1npea_ 34 PAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP--TTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT 111 (263)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC--EEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCc--EEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEecCCc
Confidence 345678899998777666654 467899888876642 223333335688999987666666554 5678999998865
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEEEcC-Cc--EEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASASYD-DT--VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-g~--i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
.. .............++++|...++...... +. |.--++..... ..+ ....-.....+++++.++.|+-+
T Consensus 112 ~~---~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~--~~i--~~~~~~~P~glaiD~~~~~lYw~ 184 (263)
T d1npea_ 112 QR---RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR--RIL--AQDNLGLPNGLTFDAFSSQLCWV 184 (263)
T ss_dssp SC---EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC--EEE--ECTTCSCEEEEEEETTTTEEEEE
T ss_pred eE---EEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCc--eee--eeecccccceEEEeecCcEEEEE
Confidence 32 11222233567899999977666654432 23 44445554332 111 22233456889999888877655
Q ss_pred -eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 244 -SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 244 -~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
...+.|...++... .....+.+. . ...+|++. .+.+..+-...+.|...|..+++
T Consensus 185 d~~~~~I~~~~~~g~---------------~~~~v~~~~-~-~P~~lav~-~~~lYwtd~~~~~I~~~~~~~g~ 240 (263)
T d1npea_ 185 DAGTHRAECLNPAQP---------------GRRKVLEGL-Q-YPFAVTSY-GKNLYYTDWKTNSVIAMDLAISK 240 (263)
T ss_dssp ETTTTEEEEEETTEE---------------EEEEEEECC-C-SEEEEEEE-TTEEEEEETTTTEEEEEETTTTE
T ss_pred eCCCCEEEEEECCCC---------------CeEEEECCC-C-CcEEEEEE-CCEEEEEECCCCEEEEEECCCCc
Confidence 45678888886321 111222332 2 34577775 34444454566888888887765
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=97.71 E-value=0.0052 Score=55.14 Aligned_cols=123 Identities=8% Similarity=0.069 Sum_probs=74.6
Q ss_pred ccCCcEEEEEECCCCCEEEEEECC-CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC------CcEEE
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFD-ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD------KSVWV 160 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d------g~i~v 160 (479)
.+.......++.+++.+++.|+.+ ..+.+||..+.++.....+.... .-.+.+..+|++.++.|+.+ ..+.+
T Consensus 73 ~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~r-~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~ 151 (387)
T d1k3ia3 73 KHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVAR-GYQSSATMSDGRVFTIGGSWSGGVFEKNGEV 151 (387)
T ss_dssp SCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCC-SSCEEEECTTSCEEEECCCCCSSSCCCCEEE
T ss_pred CcccceeEEEEecCCcEEEeecCCCcceeEecCccCcccccccccccc-cccceeeecCCceeeeccccccccccceeee
Confidence 333344566788999999988765 58999999998866544443322 23456677899998888753 36899
Q ss_pred EEeCCCCceeeeeeee-------cccc-----ceeEEEEecCCCEEEEEEcCCcEEEEecCCcc
Q psy14815 161 WEVGEEDEYECAAVIN-------AHIQ-----DVKKVRFHPFDNILASASYDDTVKLFKEDKAE 212 (479)
Q Consensus 161 wd~~~~~~~~~~~~~~-------~~~~-----~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~ 212 (479)
||..+.. +..+.... .+.. .-..+...++++.++.+...+.+.+++..+..
T Consensus 152 yd~~~~~-W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~ 214 (387)
T d1k3ia3 152 YSPSSKT-WTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGD 214 (387)
T ss_dssp EETTTTE-EEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCE
T ss_pred ecCCCCc-eeecCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecCcccCc
Confidence 9988752 22111110 0000 01112233466777777777777777766543
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=97.38 E-value=0.013 Score=52.47 Aligned_cols=238 Identities=12% Similarity=0.031 Sum_probs=118.7
Q ss_pred EEEEECCCCCeEEEeeCC-CcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcE
Q psy14815 15 WNVSWNPQGTMISSCGED-KNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 93 (479)
Q Consensus 15 ~~l~~s~~~~~l~t~~~d-g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v 93 (479)
...++.++|++++.|+.+ ..+.+||..+..-... .. ......-
T Consensus 79 ~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w~~~----------------------------------~~--~~~~r~~ 122 (387)
T d1k3ia3 79 PGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPG----------------------------------PD--MQVARGY 122 (387)
T ss_dssp CEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEEC----------------------------------CC--CSSCCSS
T ss_pred eEEEEecCCcEEEeecCCCcceeEecCccCccccc----------------------------------cc--ccccccc
Confidence 456778889888888654 5788888765443210 00 0111122
Q ss_pred EEEEECCCCCEEEEEECC------CeEEEEECCCCeEEEeEEEeC-------CC-----CcEEEEEEcCCCCEEEEEeCC
Q psy14815 94 RETAWSPCGNFIASASFD------ATTAVWDKRSGQFECNATLEG-------HE-----NEVKSVTWSKNGQFLATCSRD 155 (479)
Q Consensus 94 ~~v~~~~~~~~l~t~~~d------g~i~iwd~~~~~~~~~~~~~~-------~~-----~~v~~l~~~~~~~~l~~~~~d 155 (479)
...+..+|+++++.|+.+ ..+.+||..++++........ +. ..-..+...++++.+..+...
T Consensus 123 ~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~ 202 (387)
T d1k3ia3 123 QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPST 202 (387)
T ss_dssp CEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSS
T ss_pred cceeeecCCceeeeccccccccccceeeeecCCCCceeecCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcC
Confidence 345667789988888753 468999999987653322110 00 000112233466777777666
Q ss_pred CcEEEEEeCCCCceeeeeeeecc----cc--ceeEEEEe-cCCCEEEEEEcCC--------cEEEEecCCcccceEeeee
Q psy14815 156 KSVWVWEVGEEDEYECAAVINAH----IQ--DVKKVRFH-PFDNILASASYDD--------TVKLFKEDKAEADWINFAT 220 (479)
Q Consensus 156 g~i~vwd~~~~~~~~~~~~~~~~----~~--~v~~l~~~-~~~~~l~~~~~dg--------~i~i~d~~~~~~~~~~~~~ 220 (479)
+.+.+++...... ......... .. .-.++.+. .+++.++.|+... ...+.++............
T Consensus 203 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (387)
T d1k3ia3 203 AMNWYYTSGSGDV-KSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFA 281 (387)
T ss_dssp EEEEEECSTTCEE-EEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEEC
T ss_pred CcEEecCcccCcE-eeccccccCcccCcccccccEEEeeccCCceEEEEeccCCCCCcccceeecccccccccCCCceee
Confidence 6677766655421 111111100 00 11223332 3567777776421 2344443322211111111
Q ss_pred ec--CCCccEEEEEEccCCCEEEEeeCCC-----------eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEE
Q psy14815 221 LK--SHTSTVWSLAFDRIGSRLATCSDDA-----------TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIY 287 (479)
Q Consensus 221 ~~--~~~~~v~~~~~~~~~~~l~s~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 287 (479)
.. .....-.+....++++.++.|+.+. .+.+||... ..|..+..+... ...=.
T Consensus 282 ~~~~p~~r~~~~~~~~~dg~i~v~GG~~~~~~~~~~~~~~~ve~Ydp~~-------------~~W~~~~~~~~~-R~~Hs 347 (387)
T d1k3ia3 282 SNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQ-------------DTFYKQNPNSIV-RVYHS 347 (387)
T ss_dssp TTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGG-------------TEEEECCCCSSC-CCTTE
T ss_pred ccccccccccceeeeccCCeEEEECCcccCccCCCCcEeceEEEEECCC-------------CeEEECCCCCCc-ccceE
Confidence 11 1112223455568899888888532 467888643 233333222211 10011
Q ss_pred EEEecCCCCeEEEEeC
Q psy14815 288 DISWCHLTDLIATACG 303 (479)
Q Consensus 288 ~l~~~~~~~~l~~~~~ 303 (479)
...+.+||++++.|+.
T Consensus 348 ~a~l~~dG~v~v~GG~ 363 (387)
T d1k3ia3 348 ISLLLPDGRVFNGGGG 363 (387)
T ss_dssp EEEECTTSCEEEEECC
T ss_pred EEEECCCCEEEEEeCC
Confidence 2335689999988874
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.98 E-value=0.077 Score=44.36 Aligned_cols=153 Identities=10% Similarity=-0.003 Sum_probs=91.0
Q ss_pred CcEEEEEECCCCCEEEEE-ECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC-Cc--EEEEEeCCC
Q psy14815 91 RTIRETAWSPCGNFIASA-SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-KS--VWVWEVGEE 166 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-g~--i~vwd~~~~ 166 (479)
..+.++++..-+..|..+ ...+.|.+.++...... ..+...-..+..+++.|...+++..... +. |..-++...
T Consensus 79 ~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~--~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~ 156 (263)
T d1npea_ 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR--VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT 156 (263)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred ccccEEEEeccCCeEEEeccCCCEEEEEecCCceEE--EEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCC
Confidence 467888887756666544 45679999998866422 2233334578899999977777655432 23 444455543
Q ss_pred CceeeeeeeeccccceeEEEEecCCCEEEEE-EcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE-Eee
Q psy14815 167 DEYECAAVINAHIQDVKKVRFHPFDNILASA-SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA-TCS 244 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~ 244 (479)
.. .......-.....+++++.++.|..+ ...+.|...+++.... ..+ +.+.. ...++++. +.+|+ +-.
T Consensus 157 ~~---~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~--~~v--~~~~~-~P~~lav~--~~~lYwtd~ 226 (263)
T d1npea_ 157 NR---RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR--RKV--LEGLQ-YPFAVTSY--GKNLYYTDW 226 (263)
T ss_dssp CC---EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE--EEE--EECCC-SEEEEEEE--TTEEEEEET
T ss_pred Cc---eeeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCe--EEE--ECCCC-CcEEEEEE--CCEEEEEEC
Confidence 21 11122223456789999877767555 4567899999875442 111 22222 23567775 44554 444
Q ss_pred CCCeEEEEecc
Q psy14815 245 DDATVKIWKEY 255 (479)
Q Consensus 245 ~dg~i~iwd~~ 255 (479)
..+.|...|..
T Consensus 227 ~~~~I~~~~~~ 237 (263)
T d1npea_ 227 KTNSVIAMDLA 237 (263)
T ss_dssp TTTEEEEEETT
T ss_pred CCCEEEEEECC
Confidence 56777777763
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.86 E-value=0.15 Score=45.97 Aligned_cols=251 Identities=11% Similarity=0.067 Sum_probs=128.4
Q ss_pred ccccceEEEEECCCCCeEEEe-e----CCCcEEEEecccccccccccCCCccceEEEeecCCcEEEecCCCCCCceeeeE
Q psy14815 9 GHQGRVWNVSWNPQGTMISSC-G----EDKNIRLWVMVIREPYEKLHGLPVETSLRQLVEDKNIRLWGKESFGNKFTAKA 83 (479)
Q Consensus 9 ~h~~~V~~l~~s~~~~~l~t~-~----~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 83 (479)
++.-.+...++|||++++|-+ + ....+++.|+.+++.+...
T Consensus 122 ~~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~---------------------------------- 167 (430)
T d1qfma1 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV---------------------------------- 167 (430)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE----------------------------------
T ss_pred cccceecceEecCCCCEEEEEeccccCchheeEEeccCcceecccc----------------------------------
Confidence 344445667889999988753 2 2346889998887754210
Q ss_pred EeccccCCcEEEEEECCCCCEEEEEECC----------------CeEEEEECCCCeEEEeEEEeCCC--CcEEEEEEcCC
Q psy14815 84 ILSDGHQRTIRETAWSPCGNFIASASFD----------------ATTAVWDKRSGQFECNATLEGHE--NEVKSVTWSKN 145 (479)
Q Consensus 84 ~~~~~~~~~v~~v~~~~~~~~l~t~~~d----------------g~i~iwd~~~~~~~~~~~~~~~~--~~v~~l~~~~~ 145 (479)
+ .......++|.+|++.|+....+ ..|..|.+.+........+.... ..+..+..+++
T Consensus 168 i----~~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d 243 (430)
T d1qfma1 168 L----ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDD 243 (430)
T ss_dssp E----EEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTT
T ss_pred c----ccccccceEEcCCCCEEEEEEeccccCcccccccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCC
Confidence 0 00112457899998887765433 26888888776533344444333 34667788999
Q ss_pred CCEEEEEeC---CCcEEEE--EeCCCCce-----eeeeeeeccccceeEEEEecCCCEEEEEE---cCCcEEEEecCCcc
Q psy14815 146 GQFLATCSR---DKSVWVW--EVGEEDEY-----ECAAVINAHIQDVKKVRFHPFDNILASAS---YDDTVKLFKEDKAE 212 (479)
Q Consensus 146 ~~~l~~~~~---dg~i~vw--d~~~~~~~-----~~~~~~~~~~~~v~~l~~~~~~~~l~~~~---~dg~i~i~d~~~~~ 212 (479)
+++++.... ++...+| |+...... ...............+. +.++.+++... .++.|...++....
T Consensus 244 ~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Tn~~a~~~~L~~~~~~~~~ 322 (430)
T d1qfma1 244 GRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVT-NEGTVFTFKTNRHSPNYRLINIDFTDPE 322 (430)
T ss_dssp SCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEE-EETTEEEEEECTTCTTCEEEEEETTBCC
T ss_pred cceeeEEeeccCCccEEEEEeeCCCcccccccccceeEeecccccceEEEe-cCCceeecccCcccccceeEEecCCCCc
Confidence 998765433 3334444 54432110 00111111122222222 22233333332 24667777776543
Q ss_pred c-ceEeeeeecCCCccEEEEEEccCCCEEEEe-eCCC--eEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEE
Q psy14815 213 A-DWINFATLKSHTSTVWSLAFDRIGSRLATC-SDDA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYD 288 (479)
Q Consensus 213 ~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 288 (479)
. .|.. .+..+...+..-.+...+.+|+.. ..++ .|++++...... ...... ....+..
T Consensus 323 ~~~w~~--vi~~~~~~~~~~~~~~~~~~lvl~~~~~~~~~l~v~~~~~~~~---------------~~~~~~-~~~sv~~ 384 (430)
T d1qfma1 323 ESKWKV--LVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGAL---------------LKIFPL-EVGSVVG 384 (430)
T ss_dssp GGGCEE--EECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCE---------------EEEECC-CSSEEEE
T ss_pred cccceE--EecccCcceeeeEEEEECCEEEEEEEcCCEeEEEEEECCCCcE---------------EEecCC-CCceEee
Confidence 2 1222 123344445444444445566544 4554 577888643321 111111 1334555
Q ss_pred EEecCCCCeEEEEeCC----CeEEEcccCCCC
Q psy14815 289 ISWCHLTDLIATACGD----DAIRIFKENPEA 316 (479)
Q Consensus 289 l~~~~~~~~l~~~~~d----g~i~vw~~~~~~ 316 (479)
+...++...+...-.+ .++.-||+.+++
T Consensus 385 ~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~ 416 (430)
T d1qfma1 385 YSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (430)
T ss_dssp EECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred ccCCCCCCEEEEEEcCCCCCCeEEEEECCCCC
Confidence 5555555433322222 678888888875
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=96.73 E-value=0.15 Score=44.21 Aligned_cols=182 Identities=14% Similarity=0.107 Sum_probs=101.1
Q ss_pred ceEEEEECCCCCeEEEeeC------------CCcEEEEecccccccc-cc--c-C-------CCc---------cc-eEE
Q psy14815 13 RVWNVSWNPQGTMISSCGE------------DKNIRLWVMVIREPYE-KL--H-G-------LPV---------ET-SLR 59 (479)
Q Consensus 13 ~V~~l~~s~~~~~l~t~~~------------dg~v~iwd~~~~~~~~-~~--~-~-------~~~---------~~-~~~ 59 (479)
.-.+|...|+|..+++++. .|.|.++|+.+..... .+ . . .|. +. .+.
T Consensus 36 G~EDi~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~ 115 (340)
T d1v04a_ 36 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 115 (340)
T ss_dssp CCCEEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEE
Confidence 4456888999987776642 4889999987654321 11 1 1 111 11 122
Q ss_pred Eee---cCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCEEEEEE--C-------------CCeEEEEECCC
Q psy14815 60 QLV---EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS--F-------------DATTAVWDKRS 121 (479)
Q Consensus 60 ~~~---~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~t~~--~-------------dg~i~iwd~~~ 121 (479)
... ...+|.++++...+...................+.+..++.+++|-. . -+...+|....
T Consensus 116 vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~ 195 (340)
T d1v04a_ 116 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 195 (340)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECS
T ss_pred EEeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcC
Confidence 221 23446666665444444444444444456688899888888888731 1 12334444444
Q ss_pred CeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEE
Q psy14815 122 GQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 198 (479)
Q Consensus 122 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~ 198 (479)
++.... .. .-...+.|+++||+++|+++. ..+.|++|++............. -....-.+.+.+.+..+.+++
T Consensus 196 ~~~~~~--~~-~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~~-l~~~pDNi~~d~~~g~lwva~ 269 (340)
T d1v04a_ 196 NDVRVV--AE-GFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTGDLWVGC 269 (340)
T ss_dssp SCEEEE--EE-EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTCCEEEEE
T ss_pred CceEEE--cC-CCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCcccceEEEec-CCCCCCccEEecCCCEEEEEE
Confidence 432221 22 234578999999998777665 46789999998764433332222 233345677776433344443
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=96.67 E-value=0.19 Score=44.39 Aligned_cols=260 Identities=10% Similarity=0.053 Sum_probs=142.9
Q ss_pred eEEEeeCCCcEEEEecccccccccccCCCccce-----------EE----------EeecC-CcEEEecCCCCCCceeee
Q psy14815 25 MISSCGEDKNIRLWVMVIREPYEKLHGLPVETS-----------LR----------QLVED-KNIRLWGKESFGNKFTAK 82 (479)
Q Consensus 25 ~l~t~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-----------~~----------~~~~~-~~i~~w~~~~~~~~~~~~ 82 (479)
.+.||+..|.|+|+-+.+++.+..+........ ++ ....+ +.+..|.
T Consensus 15 ~f~SgG~sG~v~v~G~PSmR~l~~ipvF~~~~~~G~G~~~es~~il~~~~~~~t~~~l~~~g~~~~~~G----------- 83 (459)
T d1fwxa2 15 GFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNG----------- 83 (459)
T ss_dssp EEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCC--------------CCCC-----------
T ss_pred EEeeCCccceEEEEecCCcceEEEeeeecCCCCcccCcchhHHHHhhcccChhhhhhhhccCcccccCC-----------
Confidence 367889999999999999988877654311100 00 00000 1111110
Q ss_pred EEeccccCCcEEEEEECC---CCCEEEEEE-CCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC--CCCEEEEEeCCC
Q psy14815 83 AILSDGHQRTIRETAWSP---CGNFIASAS-FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK--NGQFLATCSRDK 156 (479)
Q Consensus 83 ~~~~~~~~~~v~~v~~~~---~~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~~~~~dg 156 (479)
..|.- .+.+.. ||++++... .+++|.+.|+.+.+...+..+. ....+..+...+ +-.+++.++.+.
T Consensus 84 ----D~HHP---~~S~TdGtyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iP-n~~~~HG~r~~~~p~T~YV~~~~e~~ 155 (459)
T d1fwxa2 84 ----DLHHV---HMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIP-NAKGIHGLRPQKWPRSNYVFCNGEDE 155 (459)
T ss_dssp ----CBCCE---EEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECS-SCCSEEEEEECCSSBCSEEEEEECSC
T ss_pred ----CcCCC---cccccCCccceeEEEEEcCCCceEEEEECcceeeeEEEecC-CCCCCceeecccCCCeEEEEccCccc
Confidence 11111 344433 788887776 4789999999998755555553 344567776655 445677666532
Q ss_pred ------------------cEEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCC---------------cE
Q psy14815 157 ------------------SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD---------------TV 203 (479)
Q Consensus 157 ------------------~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg---------------~i 203 (479)
.+.++|..+.+ ...+... ......+.++++|+++++.+.+. .+
T Consensus 156 vP~pndg~~l~d~~~y~~~~t~ID~~tm~---V~~QV~V-~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i 231 (459)
T d1fwxa2 156 TPLVNDGTNMEDVANYVNVFTAVDADKWE---VAWQVLV-SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHI 231 (459)
T ss_dssp EESSCSSSSTTCGG-EEEEEEEEETTTTE---EEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEE
T ss_pred cccCCCCccccchhhcceEEEEEecCCce---EEEEeee-CCChhccccCCCCCEEEEEeccccCCcchhhcccccceEE
Confidence 25667777653 2222221 23456789999999999887542 13
Q ss_pred EEEec-----------------------CCcccceEeeeeecCCCccEEEEEEccCCCEEEEee-CCCeEEEEeccCCCC
Q psy14815 204 KLFKE-----------------------DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGN 259 (479)
Q Consensus 204 ~i~d~-----------------------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~ 259 (479)
.+++. +.... ...+..+. -......+..+|||+++++++ .+.++.++|+++-..
T Consensus 232 ~V~n~~rie~av~~Gk~~eingV~VVD~~~~~~-~~v~~yIP-VpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~ 309 (459)
T d1fwxa2 232 VVFNIAEIEKAIAAGDYQELNGVKVVDGRKEAS-SLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDA 309 (459)
T ss_dssp EEEEHHHHHHHHHHTCSEEETTEEEEECSGG---CSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHH
T ss_pred EEechHHhHHhhhcCCcEEeCCceeecccccCC-cceeEEEe-cCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhh
Confidence 33332 22100 00011111 112234678999999987655 688999999864221
Q ss_pred CCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCC
Q psy14815 260 SAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 314 (479)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~ 314 (479)
... .. .+.......... .+-.-...+|...|.-..+---|..|.-|++..
T Consensus 310 ~~~--~~-~~~~~~~~~e~e--lglgPLht~fd~~g~aytslfids~v~kw~~~~ 359 (459)
T d1fwxa2 310 VFY--EN-ADPRSAVVAEPE--LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 359 (459)
T ss_dssp HHH--SC-C-GGGGEEECCB--CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred hhc--cc-CCccccEEeecc--cCcCccccccCCCceEEEEeeccceEEEEecch
Confidence 100 00 000111111111 134455678887775455555799999999853
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.57 E-value=0.16 Score=42.38 Aligned_cols=206 Identities=7% Similarity=-0.041 Sum_probs=118.6
Q ss_pred cCCcEEEEEECCCCCEEEEEE-CCCeEEEEECCCCe--EEEeEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEEeC
Q psy14815 89 HQRTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQ--FECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVG 164 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~-~dg~i~iwd~~~~~--~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~vwd~~ 164 (479)
....+.+++|.+..+.+.-.. ..+.|.-.++.... ......+......+..+++.+.+..|+.+. ..+.|.+.++.
T Consensus 28 ~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~ 107 (266)
T d1ijqa1 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 107 (266)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeeccceEEEEecCCCEEEeEecC
Confidence 345677899998777776654 45667766664321 111222333334567888887666666654 45789999988
Q ss_pred CCCceeeeeeeeccccceeEEEEecCCCEEEEEE--cCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEE
Q psy14815 165 EEDEYECAAVINAHIQDVKKVRFHPFDNILASAS--YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 242 (479)
Q Consensus 165 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 242 (479)
... ..............++++|...+|.... ..+.|.-.++..... . ......-.....+++++.++.|+-
T Consensus 108 g~~---~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~--~--~l~~~~~~~p~gl~iD~~~~~lYw 180 (266)
T d1ijqa1 108 GVK---RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--Y--SLVTENIQWPNGITLDLLSGRLYW 180 (266)
T ss_dssp SSS---EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE--E--EEECSSCSCEEEEEEETTTTEEEE
T ss_pred Cce---EEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCce--e--cccccccceeeEEEeeccccEEEE
Confidence 763 2223334445678899999665555544 334566666664432 1 112223355688999988877766
Q ss_pred e-eCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEEeCCCeEEEcccCCCC
Q psy14815 243 C-SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 243 ~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+ ...+.|...++..... ..+...... .....++++. .+.+..+-..++.|...+..+++
T Consensus 181 ~d~~~~~I~~~~~dG~~~-------------~~~~~~~~~-~~~p~~lav~-~~~ly~td~~~~~I~~~~~~~g~ 240 (266)
T d1ijqa1 181 VDSKLHSISSIDVNGGNR-------------KTILEDEKR-LAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGS 240 (266)
T ss_dssp EETTTTEEEEEETTSCSC-------------EEEEECTTT-TSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCC
T ss_pred ecCCcCEEEEEECCCCCE-------------EEEEeCCCc-ccccEEEEEE-CCEEEEEECCCCeEEEEECCCCc
Confidence 5 4567888888733211 112221211 2345567776 33444444566788777766654
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.27 E-value=0.25 Score=41.27 Aligned_cols=212 Identities=8% Similarity=0.113 Sum_probs=128.2
Q ss_pred CCcEEEEeccccccccc--ccC-----CCccceEEEeecCCcEEEecCCCCCCceeeeEEeccccCCcEEEEEECCCCCE
Q psy14815 32 DKNIRLWVMVIREPYEK--LHG-----LPVETSLRQLVEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNF 104 (479)
Q Consensus 32 dg~v~iwd~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~ 104 (479)
..+|.|-|+.......+ +.. +| ...+++.....++.++|++. . ...+. .....+|.-=.|-.+ +.
T Consensus 44 ~~~VvIidl~n~~~~~Rrpi~AdsAIMhP-~~~IiALrag~~LQiFnlet--K-~klks---~~~~e~VvfWkWis~-~~ 115 (327)
T d1utca2 44 QAQVVIIDMNDPSNPIRRPISADSAIMNP-ASKVIALKAGKTLQIFNIEM--K-SKMKA---HTMTDDVTFWKWISL-NT 115 (327)
T ss_dssp EEEEEEEETTSTTSCEEEECCCSEEEECS-SSSEEEEEETTEEEEEETTT--T-EEEEE---EECSSCCCEEEESSS-SE
T ss_pred CceEEEEECCCCCcceecccchhhhhcCC-CCcEEEEecCCeEEEEehhH--h-hhhce---EEcCCCcEEEEecCC-CE
Confidence 45788889876553222 111 23 33555666688899999983 1 11111 223457777777644 46
Q ss_pred EEEEECCCeEEEEECCCCeEEEeEEEeCCC----CcEEEEEEcCCCCEEEEEeC-------CCcEEEEEeCCCCceeeee
Q psy14815 105 IASASFDATTAVWDKRSGQFECNATLEGHE----NEVKSVTWSKNGQFLATCSR-------DKSVWVWEVGEEDEYECAA 173 (479)
Q Consensus 105 l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~----~~v~~l~~~~~~~~l~~~~~-------dg~i~vwd~~~~~~~~~~~ 173 (479)
|+..+. ..|.-|+++... .+...++.|. ..|..-..+++.++++..+- .|.+.+|..+.. ..+
T Consensus 116 L~lVT~-taVYHW~~~g~s-~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~----~sQ 189 (327)
T d1utca2 116 VALVTD-NAVYHWSMEGES-QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK----VSQ 189 (327)
T ss_dssp EEEECS-SEEEEEESSSSC-CCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT----EEE
T ss_pred EEEEcC-CceEEEcccCCC-CchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccC----cCc
Confidence 666654 689999996543 4566666664 35666667778887665432 367889998764 445
Q ss_pred eeeccccceeEEEEecCC---CEEEEEEc---CCcEEEEecCCccc---ce-Eeeeee----cCCCccEEEEEEccCCCE
Q psy14815 174 VINAHIQDVKKVRFHPFD---NILASASY---DDTVKLFKEDKAEA---DW-INFATL----KSHTSTVWSLAFDRIGSR 239 (479)
Q Consensus 174 ~~~~~~~~v~~l~~~~~~---~~l~~~~~---dg~i~i~d~~~~~~---~~-~~~~~~----~~~~~~v~~~~~~~~~~~ 239 (479)
.+.+|......+.+.-+. +.++.+.. .+.+++.++..... .+ +....+ .....-..++..++....
T Consensus 190 ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygi 269 (327)
T d1utca2 190 PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV 269 (327)
T ss_dssp EECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTE
T ss_pred cccceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCE
Confidence 677776655554443211 23433332 35788888876321 11 111111 112344567888888889
Q ss_pred EEEeeCCCeEEEEeccCC
Q psy14815 240 LATCSDDATVKIWKEYKP 257 (479)
Q Consensus 240 l~s~~~dg~i~iwd~~~~ 257 (479)
++.-+.-|.|++||+.++
T Consensus 270 iyviTK~G~i~lyDleTg 287 (327)
T d1utca2 270 VFLITKYGYIHLYDLETG 287 (327)
T ss_dssp EEEEETTSEEEEEETTTC
T ss_pred EEEEecCcEEEEEEcccc
Confidence 999999999999999544
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.85 E-value=0.39 Score=39.85 Aligned_cols=157 Identities=10% Similarity=-0.010 Sum_probs=94.5
Q ss_pred CcEEEEEECCCCCEEEEE-ECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeC--CCcEEEEEeCCCC
Q psy14815 91 RTIRETAWSPCGNFIASA-SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEED 167 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--dg~i~vwd~~~~~ 167 (479)
..+..+++.+.+..|..+ ...+.|.+.++.... ....+.........+++.|...+|+.... .+.|...++....
T Consensus 77 ~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~--~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~ 154 (266)
T d1ijqa1 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK--RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 154 (266)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS--EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred CCcceEEEeeccceEEEEecCCCEEEeEecCCce--EEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCc
Confidence 456678887755555554 456789999998765 23334445567889999986666665543 3456666666542
Q ss_pred ceeeeeeeeccccceeEEEEecCCCEEEEE-EcCCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEE-EeeC
Q psy14815 168 EYECAAVINAHIQDVKKVRFHPFDNILASA-SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA-TCSD 245 (479)
Q Consensus 168 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~ 245 (479)
. .......-...+.+++++.++.|..+ ...+.|...++..... ..+...........++++. +.+|+ +-..
T Consensus 155 ~---~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~--~~~~~~~~~~~~p~~lav~--~~~ly~td~~ 227 (266)
T d1ijqa1 155 I---YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR--KTILEDEKRLAHPFSLAVF--EDKVFWTDII 227 (266)
T ss_dssp E---EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEEECTTTTSSEEEEEEE--TTEEEEEETT
T ss_pred e---ecccccccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCE--EEEEeCCCcccccEEEEEE--CCEEEEEECC
Confidence 2 11222223456889999877666655 4567898889875442 2222223333345667776 34444 4445
Q ss_pred CCeEEEEeccC
Q psy14815 246 DATVKIWKEYK 256 (479)
Q Consensus 246 dg~i~iwd~~~ 256 (479)
++.|...+...
T Consensus 228 ~~~I~~~~~~~ 238 (266)
T d1ijqa1 228 NEAIFSANRLT 238 (266)
T ss_dssp TTEEEEEETTT
T ss_pred CCeEEEEECCC
Confidence 67776666543
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=95.69 E-value=0.56 Score=40.48 Aligned_cols=198 Identities=12% Similarity=0.136 Sum_probs=113.9
Q ss_pred CCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcC------CCCEEEEEeC--C--CcEEEEEeCCCCce
Q psy14815 100 PCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK------NGQFLATCSR--D--KSVWVWEVGEEDEY 169 (479)
Q Consensus 100 ~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~------~~~~l~~~~~--d--g~i~vwd~~~~~~~ 169 (479)
|+..+++....++-|.+||+.... +..+. .+.+..+..-. ...-+++++. + .+|.+|.+.....
T Consensus 38 p~~SlI~gTdK~~Gl~vYdL~G~~---l~~~~--~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~- 111 (353)
T d1h6la_ 38 PQNSKLITTNKKSGLAVYSLEGKM---LHSYH--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG- 111 (353)
T ss_dssp GGGCEEEEEETTSCCEEEETTCCE---EEECC--SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTT-
T ss_pred cCccEEEEEcCcCCEEEEcCCCcE---EEecc--cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCccc-
Confidence 355677777777789999996442 33332 34555555432 2223555553 2 2577888764321
Q ss_pred eeeeeeec-------cccceeEEEE--ecC-CC-EEEEEEcCCcEEEEecCC---cccceEeeeeecCCCccEEEEEEcc
Q psy14815 170 ECAAVINA-------HIQDVKKVRF--HPF-DN-ILASASYDDTVKLFKEDK---AEADWINFATLKSHTSTVWSLAFDR 235 (479)
Q Consensus 170 ~~~~~~~~-------~~~~v~~l~~--~~~-~~-~l~~~~~dg~i~i~d~~~---~~~~~~~~~~~~~~~~~v~~~~~~~ 235 (479)
.+..+.. ....+..+|+ ++. +. ++++...+|.+..|.+.. +......++.+. -...+..+.++.
T Consensus 112 -~l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~-~~~q~EGCVvDd 189 (353)
T d1h6la_ 112 -TLQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFK-MNSQTEGMAADD 189 (353)
T ss_dssp -EEEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEE-CSSCEEEEEEET
T ss_pred -ccccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccC-CCCccceEEEeC
Confidence 1111111 1123666776 554 44 466677789998887642 223334455554 346788999999
Q ss_pred CCCEEEEeeCCCeEEEEeccCCCCCCCCCCCCCCCceEEEEEEec-cccccEEEEEecC--C--CCeEEEEeCCCeEEEc
Q psy14815 236 IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-HHGRTIYDISWCH--L--TDLIATACGDDAIRIF 310 (479)
Q Consensus 236 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~--~--~~~l~~~~~dg~i~vw 310 (479)
..+.|+.+-++..|..+++..... .....+....+ +....+..|+.-. + |-+|+|...+++..+|
T Consensus 190 e~~~LyisEE~~Giw~~~a~~~~~----------~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vy 259 (353)
T d1h6la_ 190 EYGSLYIAEEDEAIWKFSAEPDGG----------SNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIY 259 (353)
T ss_dssp TTTEEEEEETTTEEEEEESSTTSC----------SCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEE
T ss_pred CCCcEEEecCccceEEEEeccCCC----------ccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEE
Confidence 999999998876665555432211 11122333322 2345677776543 2 3355555668899999
Q ss_pred ccCCC
Q psy14815 311 KENPE 315 (479)
Q Consensus 311 ~~~~~ 315 (479)
|....
T Consensus 260 dr~~~ 264 (353)
T d1h6la_ 260 ERQGQ 264 (353)
T ss_dssp ESSTT
T ss_pred ecCCC
Confidence 98764
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=95.59 E-value=0.61 Score=40.23 Aligned_cols=161 Identities=12% Similarity=0.073 Sum_probs=86.9
Q ss_pred EEEEcCCCCEEEEEe------------CCCcEEEEEeCCCCceeeeeeeecc-----ccceeEEEE--ecCCC-EEEEEE
Q psy14815 139 SVTWSKNGQFLATCS------------RDKSVWVWEVGEEDEYECAAVINAH-----IQDVKKVRF--HPFDN-ILASAS 198 (479)
Q Consensus 139 ~l~~~~~~~~l~~~~------------~dg~i~vwd~~~~~~~~~~~~~~~~-----~~~v~~l~~--~~~~~-~l~~~~ 198 (479)
.|...|+|..+++++ ..|.+.++|+.+.........+.+. ......+.+ .+++. +|++..
T Consensus 39 Di~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~vvn 118 (340)
T d1v04a_ 39 DLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVN 118 (340)
T ss_dssp EEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEEEE
T ss_pred eEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEEEe
Confidence 455556655544442 2488999998875432222111111 111233433 34554 344432
Q ss_pred ---cCCcEEEEecCCcccceEeeeeecC-CCccEEEEEEccCCCEEEEeeC---C------------CeEEEEeccCCCC
Q psy14815 199 ---YDDTVKLFKEDKAEADWINFATLKS-HTSTVWSLAFDRIGSRLATCSD---D------------ATVKIWKEYKPGN 259 (479)
Q Consensus 199 ---~dg~i~i~d~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~---d------------g~i~iwd~~~~~~ 259 (479)
...+|.+|++.........+.+... .....+++++..++.+++|-.. + +.-.+|.....
T Consensus 119 H~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~-- 196 (340)
T d1v04a_ 119 HPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN-- 196 (340)
T ss_dssp CSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSS--
T ss_pred ccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCC--
Confidence 4567888988655543344444432 2345788999888888887321 0 12233332111
Q ss_pred CCCCCCCCCCCceEEEEEEeccccccEEEEEecCCCCeEEEE-eCCCeEEEcccCCCC
Q psy14815 260 SAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA-CGDDAIRIFKENPEA 316 (479)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~-~~dg~i~vw~~~~~~ 316 (479)
..+ ....+ -...+.++++|++++|+.+ +..+.|++|++....
T Consensus 197 -----------~~~--~~~~~--l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~ 239 (340)
T d1v04a_ 197 -----------DVR--VVAEG--FDFANGINISPDGKYVYIAELLAHKIHVYEKHANW 239 (340)
T ss_dssp -----------CEE--EEEEE--ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred -----------ceE--EEcCC--CCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCc
Confidence 111 11121 3457889999999866555 557899999987543
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=95.58 E-value=0.92 Score=42.19 Aligned_cols=23 Identities=4% Similarity=0.192 Sum_probs=20.4
Q ss_pred CCCeEEEEeCCCeEEEcccCCCC
Q psy14815 294 LTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 294 ~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
.+.+++.|+.||.++.+|.++++
T Consensus 468 agglVF~G~~dg~l~A~Da~tGe 490 (560)
T d1kv9a2 468 AGNLVFQGTAAGQMHAYSADKGE 490 (560)
T ss_dssp TTTEEEEECTTSEEEEEETTTCC
T ss_pred CCCEEEEECCCCcEEEEECCCCc
Confidence 45678889999999999999998
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=95.51 E-value=0.99 Score=42.08 Aligned_cols=53 Identities=13% Similarity=0.226 Sum_probs=32.8
Q ss_pred CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCC
Q psy14815 201 DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 258 (479)
Q Consensus 201 g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 258 (479)
|.|.-+|+.+++..|+.........+.+ +-.+..+++|+.||.++-+|.++++
T Consensus 444 G~l~AiD~~TG~~~W~~~~~~~~~~g~l-----~TagglVf~G~~dg~l~A~Da~tGe 496 (571)
T d2ad6a1 444 GQIRAFDLTTGKAKWTKWEKFAAWGGTL-----YTKGGLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp EEEEEECTTTCCEEEEEEESSCCCSBCE-----EETTTEEEEECTTSEEEEEETTTCC
T ss_pred ccEEEeccCCCceeeEcCCCCCCCccee-----EecCCEEEEECCCCeEEEEECCCCc
Confidence 3566777777776554433222222222 2236678889999999999986553
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.45 E-value=0.83 Score=40.85 Aligned_cols=106 Identities=11% Similarity=0.103 Sum_probs=65.3
Q ss_pred cCCcEEEEEECCCCCEEEEEE-CC----CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCC--------
Q psy14815 89 HQRTIRETAWSPCGNFIASAS-FD----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-------- 155 (479)
Q Consensus 89 ~~~~v~~v~~~~~~~~l~t~~-~d----g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-------- 155 (479)
+.-.+..+++||++++++.+- .+ ..+++.|+.+++... ..+.. .....+.|.+|++.|+....+
T Consensus 123 ~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~-~~i~~--~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~ 199 (430)
T d1qfma1 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELP-DVLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDG 199 (430)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEE-EEEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSS
T ss_pred ccceecceEecCCCCEEEEEeccccCchheeEEeccCcceecc-ccccc--ccccceEEcCCCCEEEEEEeccccCcccc
Confidence 333455678899999988653 23 389999999998543 22321 112468899999987755432
Q ss_pred --------CcEEEEEeCCCCceeeeeeeecc--ccceeEEEEecCCCEEEEEE
Q psy14815 156 --------KSVWVWEVGEEDEYECAAVINAH--IQDVKKVRFHPFDNILASAS 198 (479)
Q Consensus 156 --------g~i~vwd~~~~~~~~~~~~~~~~--~~~v~~l~~~~~~~~l~~~~ 198 (479)
..|..+.+.+... .-...+... ...+..+..++++++++...
T Consensus 200 ~~~~~~~~~~v~~h~lgt~~~-~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~ 251 (430)
T d1qfma1 200 TETSTNLHQKLYYHVLGTDQS-EDILCAEFPDEPKWMGGAELSDDGRYVLLSI 251 (430)
T ss_dssp SCCCCCCCCEEEEEETTSCGG-GCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred cccccCCcceEEEEECCCCcc-ccccccccccCCceEEeeeccCCcceeeEEe
Confidence 2477777766532 112222222 23456677888998877544
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=94.30 E-value=2.1 Score=39.92 Aligned_cols=23 Identities=13% Similarity=0.102 Sum_probs=20.6
Q ss_pred CCCeEEEEeCCCeEEEcccCCCC
Q psy14815 294 LTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 294 ~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
.+.+++.|+.||.++.+|.++++
T Consensus 483 agglVF~G~~Dg~l~A~Da~TGe 505 (596)
T d1w6sa_ 483 AGDLVFYGTLDGYLKARDSDTGD 505 (596)
T ss_dssp TTTEEEEECTTSEEEEEETTTCC
T ss_pred cCCEEEEECCCCeEEEEECCCCc
Confidence 46678889999999999999998
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=93.91 E-value=0.49 Score=44.29 Aligned_cols=55 Identities=9% Similarity=0.151 Sum_probs=36.3
Q ss_pred CeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCce
Q psy14815 112 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 169 (479)
Q Consensus 112 g~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 169 (479)
|.+.-||+.+++..-...... +...-..+..+.++++|+.||.++.+|.++++.+
T Consensus 457 G~l~AiD~~tGk~~W~~~~~~---p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~L 511 (573)
T d1kb0a2 457 GRLLAWDPVAQKAAWSVEHVS---PWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKL 511 (573)
T ss_dssp EEEEEEETTTTEEEEEEEESS---SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ccEEEeCCCCCceEeeecCCC---CCCCceEEEcCCEEEEECCCCeEEEEECCCCcEe
Confidence 468888998887433332221 1111112336778999999999999999999644
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.67 E-value=2 Score=37.33 Aligned_cols=140 Identities=9% Similarity=-0.068 Sum_probs=79.7
Q ss_pred cEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEeCCCCceee
Q psy14815 92 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYEC 171 (479)
Q Consensus 92 ~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 171 (479)
.|..++|+.+ .++... ++.+..++..+-. .......-..++.++.++|. .++....+|.+.++++...+....
T Consensus 88 ~v~~vafs~d--~l~v~~-~~~l~~~~~~~l~--~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~ 160 (381)
T d1xipa_ 88 DVIFVCFHGD--QVLVST-RNALYSLDLEELS--EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQL 160 (381)
T ss_dssp TEEEEEEETT--EEEEEE-SSEEEEEESSSTT--CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEE
T ss_pred CeEEEEeeCC--EEEEEe-CCCEEEEEeeccc--cccccccccccccceecCCc--eeEEEecCCCEEEEEeccCccccc
Confidence 6888999744 455544 4678888876532 22233334456888888764 577777889999999988753222
Q ss_pred eee--eeccccceeEEEEecCCCEEEEEEcCCcEEEE-ecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEe
Q psy14815 172 AAV--INAHIQDVKKVRFHPFDNILASASYDDTVKLF-KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 243 (479)
Q Consensus 172 ~~~--~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~-d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 243 (479)
... -..-...+.+++|++.|..++++..++ ..+- ++..... +.........|.++.|-.+..++++-
T Consensus 161 ~~~v~~~~~~~~~~~v~ws~kgkq~v~~~g~~-~q~k~~i~~~~~----~~~p~~~~~~v~sI~WL~~~~F~vvy 230 (381)
T d1xipa_ 161 AQNVTSFDVTNSQLAVLLKDRSFQSFAWRNGE-MEKQFEFSLPSE----LEELPVEEYSPLSVTILSPQDFLAVF 230 (381)
T ss_dssp EESEEEEEECSSEEEEEETTSCEEEEEEETTE-EEEEEEECCCHH----HHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred cCCcceEEecCCceEEEEeCCcEEEEEeCCCc-eeeccCCCCccc----cCCCcCCCcceeEEEEecCceEEEEE
Confidence 110 011234577788887777777763322 1111 1111100 11111234568899998766666544
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.46 E-value=3 Score=38.75 Aligned_cols=54 Identities=11% Similarity=0.145 Sum_probs=35.9
Q ss_pred CCcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCC
Q psy14815 200 DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 258 (479)
Q Consensus 200 dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 258 (479)
.|.+.-+|+.+++..|+.........+. .+..+..+++|+.||.++-+|..+++
T Consensus 465 ~G~l~AiD~~TG~i~W~~~~~~p~~~g~-----lstagglVF~Gt~dg~l~A~Da~TGe 518 (582)
T d1flga_ 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGV-----LATAGNLVFTGTGDGYFKAFDAKSGK 518 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCC-----EEETTTEEEEECTTSEEEEEETTTCC
T ss_pred CCeEEEEcCCCCcEEeecCCCCCCccce-----eEEcCCeEEEeCCCCeEEEEECCCCc
Confidence 3678888888888766543322222222 23457788889999999999986553
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=93.46 E-value=3 Score=38.69 Aligned_cols=125 Identities=6% Similarity=0.074 Sum_probs=67.6
Q ss_pred CEEEEEEcCCcEEEEecCCcccceEeeee-------ecCC-----------------------C-ccEEEEEEccCCCEE
Q psy14815 192 NILASASYDDTVKLFKEDKAEADWINFAT-------LKSH-----------------------T-STVWSLAFDRIGSRL 240 (479)
Q Consensus 192 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~~-----------------------~-~~v~~~~~~~~~~~l 240 (479)
..++.++.+|.+.++|..+++..+..... +..+ . ..-..++++|+...+
T Consensus 328 ~~v~~~~k~G~l~~lDr~tGe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~Gg~~w~~~a~dp~~~~~ 407 (573)
T d1kb0a2 328 KVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLV 407 (573)
T ss_dssp EEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEE
T ss_pred eeeeeccccceeEEeccccccccccccccccccccccccccceeeeeeccccccceEEeecccCCccccccccCCCcceE
Confidence 46777888999999999888753321100 0000 0 001134678887788
Q ss_pred EEeeCCCeEEEEeccCCCCCCCC-----------------CCCCCCCceEEEEEEeccccccEEEEEec---------CC
Q psy14815 241 ATCSDDATVKIWKEYKPGNSAGI-----------------PTPDNDSVWKCVCTLSGHHGRTIYDISWC---------HL 294 (479)
Q Consensus 241 ~s~~~dg~i~iwd~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~i~~l~~~---------~~ 294 (479)
+....+....++........... ..+.....+..+..+....+..++...+. -.
T Consensus 408 yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~~G~l~AiD~~tGk~~W~~~~~~p~~gg~lsta 487 (573)
T d1kb0a2 408 YLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTA 487 (573)
T ss_dssp EEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEET
T ss_pred EeeccccceeeecccccccccCCCCccccccccccccccccCCCCCCCcccEEEeCCCCCceEeeecCCCCCCCceEEEc
Confidence 77766665555544322111100 00011111222333333333334443332 24
Q ss_pred CCeEEEEeCCCeEEEcccCCCC
Q psy14815 295 TDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 295 ~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
+.++++|+.||.++.+|.++++
T Consensus 488 gglVF~G~~dg~l~A~Da~TGe 509 (573)
T d1kb0a2 488 GNVVFQGTADGRLVAYHAATGE 509 (573)
T ss_dssp TTEEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEECCCCeEEEEECCCCc
Confidence 6688889999999999999998
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=93.34 E-value=2.6 Score=37.68 Aligned_cols=110 Identities=9% Similarity=0.140 Sum_probs=65.4
Q ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeC------CCCcEEEEEEcCC---CCEEEEEeC------
Q psy14815 90 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG------HENEVKSVTWSKN---GQFLATCSR------ 154 (479)
Q Consensus 90 ~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~------~~~~v~~l~~~~~---~~~l~~~~~------ 154 (479)
-...++|+|.|+++++++--..|.|++++..+++...+..+.. -+.....|+|+|+ ..+++....
T Consensus 26 L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pdf~~n~~iYvsyt~~~~~~ 105 (450)
T d1crua_ 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (450)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCCCccCCEEEEEEecCCCCC
Confidence 3577899999999988877667999999988886555444421 2356789999984 334444321
Q ss_pred -C----C--cEEEEEeCCCCce-e----eeeee-eccccceeEEEEecCCCEEEEEEc
Q psy14815 155 -D----K--SVWVWEVGEEDEY-E----CAAVI-NAHIQDVKKVRFHPFDNILASASY 199 (479)
Q Consensus 155 -d----g--~i~vwd~~~~~~~-~----~~~~~-~~~~~~v~~l~~~~~~~~l~~~~~ 199 (479)
+ . .+..+........ . .+..+ .........|.|.|++.+.++.+.
T Consensus 106 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~H~gg~l~fgpDG~LYvs~Gd 163 (450)
T d1crua_ 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (450)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cccccccceEEEeeecccccccccceEEEeecccccccccccceeEcCCCCEEEEecC
Confidence 1 1 1333333332110 0 01111 111233578999999987776653
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=93.18 E-value=3.3 Score=38.36 Aligned_cols=23 Identities=13% Similarity=0.083 Sum_probs=20.2
Q ss_pred CCCeEEEEeCCCeEEEcccCCCC
Q psy14815 294 LTDLIATACGDDAIRIFKENPEA 316 (479)
Q Consensus 294 ~~~~l~~~~~dg~i~vw~~~~~~ 316 (479)
.+.++++|+.||.++-+|.++++
T Consensus 474 agglVf~G~~dg~l~A~Da~tGe 496 (571)
T d2ad6a1 474 KGGLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp TTTEEEEECTTSEEEEEETTTCC
T ss_pred cCCEEEEECCCCeEEEEECCCCc
Confidence 35578889999999999999998
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=92.67 E-value=4 Score=37.98 Aligned_cols=145 Identities=16% Similarity=0.081 Sum_probs=81.1
Q ss_pred CeEEEeeCCCcEEEEecccccccccccCCC-------------ccceEEEee------cCCcEEEecCCCCCCceeeeEE
Q psy14815 24 TMISSCGEDKNIRLWVMVIREPYEKLHGLP-------------VETSLRQLV------EDKNIRLWGKESFGNKFTAKAI 84 (479)
Q Consensus 24 ~~l~t~~~dg~v~iwd~~~~~~~~~~~~~~-------------~~~~~~~~~------~~~~i~~w~~~~~~~~~~~~~~ 84 (479)
.+++.++.|+.|.-.|.++|+.+..+.... ....++... ..+.|.-+|..+....+.....
T Consensus 122 ~~v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~t~ 201 (596)
T d1w6sa_ 122 ALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (596)
T ss_dssp CEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred eEEEEEeCCCCeEeeccccCceeccccccccccccccccCCcEECCeEEEeeccccccccCceEEEECCCCcEEEEeecc
Confidence 468888889999888999888776654211 122333332 2367888888765555543321
Q ss_pred ec---------------------------------cccCCcEEEEEECCCCCEEEEEEC----------------CCeEE
Q psy14815 85 LS---------------------------------DGHQRTIRETAWSPCGNFIASASF----------------DATTA 115 (479)
Q Consensus 85 ~~---------------------------------~~~~~~v~~v~~~~~~~~l~t~~~----------------dg~i~ 115 (479)
.. .+-...-..+++.+...++..+.. ...|.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~siv 281 (596)
T d1w6sa_ 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF 281 (596)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred CCccccccccccccccccccccccccccCCCCceecCCCccccccccccCCCeeeccccccccccccccccccccccccc
Confidence 10 000111123445565566655533 24577
Q ss_pred EEECCCCeEEEeEEEeCCC-------CcEEEEEE-cCCCC---EEEEEeCCCcEEEEEeCCCCc
Q psy14815 116 VWDKRSGQFECNATLEGHE-------NEVKSVTW-SKNGQ---FLATCSRDKSVWVWEVGEEDE 168 (479)
Q Consensus 116 iwd~~~~~~~~~~~~~~~~-------~~v~~l~~-~~~~~---~l~~~~~dg~i~vwd~~~~~~ 168 (479)
-.|+++++..-......|. .....+.. ..+++ .++.+..+|.+.++|..+++.
T Consensus 282 AlD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~ 345 (596)
T d1w6sa_ 282 GRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGAL 345 (596)
T ss_dssp EEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCE
T ss_pred ccccccccccccccceeccccCCccccceeeeeccccccccccceeccccccceeeecCCCCce
Confidence 8899999844333333232 11112221 22443 577788899999999887753
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=92.49 E-value=4 Score=37.61 Aligned_cols=53 Identities=9% Similarity=0.107 Sum_probs=33.5
Q ss_pred CcEEEEecCCcccceEeeeeecCCCccEEEEEEccCCCEEEEeeCCCeEEEEeccCCC
Q psy14815 201 DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 258 (479)
Q Consensus 201 g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 258 (479)
|.+.-+|+.+++..|+.........+ .+.-.+..+++|+.||.++-+|..+++
T Consensus 438 G~l~A~D~~tGk~~W~~~~~~~~~gg-----~l~TagglVF~G~~dg~l~A~Da~tGe 490 (560)
T d1kv9a2 438 GALLAWDPVKQKAAWKVPYPTHWNGG-----TLSTAGNLVFQGTAAGQMHAYSADKGE 490 (560)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCC-----EEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred cceEEEeCCCCeEeeeccCCCCCCCc-----eeEECCCEEEEECCCCcEEEEECCCCc
Confidence 45777888877765543322211111 122346788889999999999986654
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=91.72 E-value=4.2 Score=36.22 Aligned_cols=55 Identities=7% Similarity=0.102 Sum_probs=38.6
Q ss_pred cceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEeeeeec------CCCccEEEEEEccC
Q psy14815 180 QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLK------SHTSTVWSLAFDRI 236 (479)
Q Consensus 180 ~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~ 236 (479)
...++|+|.|+++++++--..|.|++++..++.. ..+..+. .-+.....++|+|+
T Consensus 27 ~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~--~~i~~~~~~~~~~~ge~GLLgia~~Pd 87 (450)
T d1crua_ 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSV--KTVFQVPEIVNDADGQNGLLGFAFHPD 87 (450)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE--EEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCceEEEEeCCCeEEEEEecCCEEEEEECCCCcE--eecccCCccccccCCCCceeeEEeCCC
Confidence 4567999999999887665579999998776553 2222221 22456789999985
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=91.43 E-value=3.8 Score=35.06 Aligned_cols=120 Identities=12% Similarity=0.123 Sum_probs=72.6
Q ss_pred cEEEEEE--cCC-CC-EEEEEeCCCcEEEEEeCCCCc----eeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEe
Q psy14815 136 EVKSVTW--SKN-GQ-FLATCSRDKSVWVWEVGEEDE----YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 207 (479)
Q Consensus 136 ~v~~l~~--~~~-~~-~l~~~~~dg~i~vwd~~~~~~----~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d 207 (479)
.++.+|+ ++. +. ++++...+|.+..|.+..... ...++.+. -...+..|.+.+....|+.+-++..|..++
T Consensus 129 ~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~-~~~q~EGCVvDde~~~LyisEE~~Giw~~~ 207 (353)
T d1h6la_ 129 EVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFK-MNSQTEGMAADDEYGSLYIAEEDEAIWKFS 207 (353)
T ss_dssp SCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEE-CSSCEEEEEEETTTTEEEEEETTTEEEEEE
T ss_pred cceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccC-CCCccceEEEeCCCCcEEEecCccceEEEE
Confidence 4666666 553 44 567777889999998754321 22333333 245688999999889999998887777776
Q ss_pred cCCcccc-eEeeeeec--CCCccEEEEEEc--cCCC-EEE-EeeCCCeEEEEeccC
Q psy14815 208 EDKAEAD-WINFATLK--SHTSTVWSLAFD--RIGS-RLA-TCSDDATVKIWKEYK 256 (479)
Q Consensus 208 ~~~~~~~-~~~~~~~~--~~~~~v~~~~~~--~~~~-~l~-s~~~dg~i~iwd~~~ 256 (479)
....... ...+.... .....+-.++.- .++. +|+ |.-.+++..+||...
T Consensus 208 a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~ 263 (353)
T d1h6la_ 208 AEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQG 263 (353)
T ss_dssp SSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred eccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCC
Confidence 6532211 11222221 234567777653 3333 544 444678899999744
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.57 E-value=5.8 Score=34.23 Aligned_cols=141 Identities=9% Similarity=0.095 Sum_probs=85.9
Q ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECC-----------CCeEEEeEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy14815 91 RTIRETAWSPCGNFIASASFDATTAVWDKR-----------SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVW 159 (479)
Q Consensus 91 ~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~-----------~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~ 159 (479)
....-+++++...+++.|+.++ +.|.... ...... ... -..|..++|+.+ .++.. .++.+.
T Consensus 37 ~~~~LLAVsn~~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~--~~~--ip~v~~vafs~d--~l~v~-~~~~l~ 108 (381)
T d1xipa_ 37 ASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKW--EKE--IPDVIFVCFHGD--QVLVS-TRNALY 108 (381)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSE--EEE--CTTEEEEEEETT--EEEEE-ESSEEE
T ss_pred cccceEEEeCCCCEEEEECCCE-EEEEEHHHHHHHhhccCCCCccee--ccC--CCCeEEEEeeCC--EEEEE-eCCCEE
Confidence 4566788888778888888764 6676532 111111 111 136889999754 45554 456788
Q ss_pred EEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcCCcEEEEecCCcccceEe--eeeecCCCccEEEEEEccCC
Q psy14815 160 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN--FATLKSHTSTVWSLAFDRIG 237 (479)
Q Consensus 160 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~ 237 (479)
.++......... ...-..++.++.++|. .++....+|.+.++++......... +..+. -.+.+.+++|++.|
T Consensus 109 ~~~~~~l~~~~~---~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~-~~~~~~~v~ws~kg 182 (381)
T d1xipa_ 109 SLDLEELSEFRT---VTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQNVTSFD-VTNSQLAVLLKDRS 182 (381)
T ss_dssp EEESSSTTCEEE---EEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEESEEEEE-ECSSEEEEEETTSC
T ss_pred EEEeeccccccc---cccccccccceecCCc--eeEEEecCCCEEEEEeccCccccccCCcceEE-ecCCceEEEEeCCc
Confidence 888877533222 2223456777777764 5666777899999999876531110 01111 23557888888888
Q ss_pred CEEEEeeC
Q psy14815 238 SRLATCSD 245 (479)
Q Consensus 238 ~~l~s~~~ 245 (479)
+.++++..
T Consensus 183 kq~v~~~g 190 (381)
T d1xipa_ 183 FQSFAWRN 190 (381)
T ss_dssp EEEEEEET
T ss_pred EEEEEeCC
Confidence 88877643
|
| >d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Acylamino-acid-releasing enzyme, N-terminal donain domain: Acylamino-acid-releasing enzyme, N-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=88.73 E-value=4.3 Score=31.61 Aligned_cols=208 Identities=10% Similarity=0.058 Sum_probs=112.1
Q ss_pred CCCeEEEeeCCCcEEEEecccccccccccCC-------CccceEEEee-------cCCcEEEecCCCCCCceeeeEEecc
Q psy14815 22 QGTMISSCGEDKNIRLWVMVIREPYEKLHGL-------PVETSLRQLV-------EDKNIRLWGKESFGNKFTAKAILSD 87 (479)
Q Consensus 22 ~~~~l~t~~~dg~v~iwd~~~~~~~~~~~~~-------~~~~~~~~~~-------~~~~i~~w~~~~~~~~~~~~~~~~~ 87 (479)
+.++++++...|.+.++-+..++...--... ...-..+.+. +...+..-++...+...... .
T Consensus 25 ~d~ll~~~~seG~vni~~l~g~~~vkLtkePI~~~~~Pk~~ldfi~f~RDV~kGkE~Hai~~~Nlk~~GEE~~i~----s 100 (313)
T d2hu7a1 25 GDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLE----A 100 (313)
T ss_dssp TTEEEEEEEETTEEEEEEESSSSCEECCSSCCSEECEECTTBSEEEEEEECSTTSCCEEEEEEETTSTTCEEECT----T
T ss_pred CCcEEEEEeccceEEEEEEeCCEEEEEecccccCcCCCccCcceEEEEeehhcCcceeeEEEEccCCCCeeeEec----C
Confidence 3457888888999999987766544322111 0011111111 11224444444333322211 1
Q ss_pred ccCCcEEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEeEEEeCCCCcEEEE--------EE-cCCCCEEEEEeC-CCc
Q psy14815 88 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV--------TW-SKNGQFLATCSR-DKS 157 (479)
Q Consensus 88 ~~~~~v~~v~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~l--------~~-~~~~~~l~~~~~-dg~ 157 (479)
...-.|.++++. +.+..++|+......+|-++.|+...+..+.+. +.|+.+ .+ .+...-|+++.. .|.
T Consensus 101 pk~vRI~S~~yd-dk~vvF~Gased~~~LYviegGklrkL~~vPpF-sFVtDI~~d~I~G~g~~~g~~~sfF~adl~SG~ 178 (313)
T d2hu7a1 101 VKPMRILSGVDT-GEAVVFTGATEDRVALYALDGGGLRELARLPGF-GFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG 178 (313)
T ss_dssp SCSBEEEEEEEC-SSCEEEEEECSSCEEEEEEETTEEEEEEEESSC-EEEEEEETTEEEEEEEEETTEEEEEEEETTTEE
T ss_pred CceEEEEEeeec-CceEEEecccCCceEEEEEeCCceeeeccCCCc-ceEEeccCCeEEEEeeecCCcceEEEEecccCC
Confidence 112456666664 556788888888899999999987777666643 234333 22 222223444443 455
Q ss_pred EEEEEeCCCCceeeeeeeeccccceeEEEEecCCCEEEEEEcC-C--cEEEEecCCcccceEeeeeecC------CCccE
Q psy14815 158 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD-D--TVKLFKEDKAEADWINFATLKS------HTSTV 228 (479)
Q Consensus 158 i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-g--~i~i~d~~~~~~~~~~~~~~~~------~~~~v 228 (479)
+++++-. .+.++...+.+..+ ++++-+. | ...-+|++.++-.. ..+.. ....|
T Consensus 179 lri~tpk--------------eGS~~~ay~~~gnK-V~sdyEt~gEsywit~D~~s~~yer---ve~P~kd~~sy~p~~I 240 (313)
T d2hu7a1 179 LRVFDSG--------------EGSFSSASISPGMK-VTAGLETAREARLVTVDPRDGSVED---LELPSKDFSSYRPTAI 240 (313)
T ss_dssp EEEECCS--------------SEEEEEEEECTTSC-EEEEEEESSCEEEEEECTTTCCEEE---CCCSSCHHHHHCCSEE
T ss_pred EEEecCC--------------CCcccceeEccCce-eeeccCCCCceEEEEEecccCceee---eecCcccceeecceEE
Confidence 5555443 44455555666444 3444321 1 12245776544211 11111 22346
Q ss_pred EEEEEccCCCEEEEeeCCCeEEEEe
Q psy14815 229 WSLAFDRIGSRLATCSDDATVKIWK 253 (479)
Q Consensus 229 ~~~~~~~~~~~l~s~~~dg~i~iwd 253 (479)
+-+-+.|+++.++.+-.||.=++|.
T Consensus 241 ~~~~Y~Pdd~L~iiakrdG~s~lF~ 265 (313)
T d2hu7a1 241 TWLGYLPDGRLAVVARREGRSAVFI 265 (313)
T ss_dssp EEEEECTTSCEEEEEEETTEEEEEE
T ss_pred EeeeeCCCCcEEEEEecCCchheee
Confidence 6677899999988999999999996
|