Psyllid ID: psy14817
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 138 | 2.2.26 [Sep-21-2011] | |||||||
| B4P7Q3 | 335 | Probable cytosolic iron-s | N/A | N/A | 0.927 | 0.382 | 0.635 | 8e-45 | |
| B3NQR5 | 335 | Probable cytosolic iron-s | N/A | N/A | 0.927 | 0.382 | 0.635 | 1e-44 | |
| B4KTK4 | 331 | Probable cytosolic iron-s | N/A | N/A | 0.934 | 0.389 | 0.638 | 1e-44 | |
| Q7K1Y4 | 335 | Probable cytosolic iron-s | yes | N/A | 0.927 | 0.382 | 0.612 | 5e-44 | |
| B4MY77 | 335 | Probable cytosolic iron-s | N/A | N/A | 0.927 | 0.382 | 0.620 | 7e-44 | |
| B4QFZ8 | 335 | Probable cytosolic iron-s | N/A | N/A | 0.927 | 0.382 | 0.612 | 9e-44 | |
| B3MC74 | 335 | Probable cytosolic iron-s | N/A | N/A | 0.934 | 0.385 | 0.607 | 2e-43 | |
| B4HRQ6 | 335 | Probable cytosolic iron-s | N/A | N/A | 0.927 | 0.382 | 0.604 | 2e-43 | |
| O76071 | 339 | Probable cytosolic iron-s | yes | N/A | 0.942 | 0.383 | 0.595 | 2e-43 | |
| B4JW81 | 331 | Probable cytosolic iron-s | N/A | N/A | 0.934 | 0.389 | 0.592 | 2e-43 |
| >sp|B4P7Q3|CIAO1_DROYA Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila yakuba GN=Ciao1 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 82/129 (63%), Positives = 97/129 (75%), Gaps = 1/129 (0%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G RL +CSDD TVKIW+ Y PGNSAG+ TPD +VWKCVCTLSG H R IYD+SWC LT
Sbjct: 206 GERLVSCSDDTTVKIWRAYHPGNSAGVATPDQQTVWKCVCTLSGQHSRAIYDVSWCKLTG 265
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
LIATACGDD IRIFKE ++ D +F+ + E AH+QDVN V WNPVV G L SCSD
Sbjct: 266 LIATACGDDGIRIFKETSDS-KPDEPTFEQLTAEESAHDQDVNSVQWNPVVAGQLISCSD 324
Query: 125 DGDVKLWQI 133
DG +K+W++
Sbjct: 325 DGTIKIWKV 333
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila yakuba (taxid: 7245) |
| >sp|B3NQR5|CIAO1_DROER Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila erecta GN=Ciao1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 82/129 (63%), Positives = 97/129 (75%), Gaps = 1/129 (0%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G RL +CSDD T+KIWK Y PGNSAG+ TPD +VWKCVCTLSG H R IYD+SWC LT
Sbjct: 206 GERLVSCSDDTTIKIWKAYHPGNSAGVATPDQQTVWKCVCTLSGQHSRAIYDVSWCKLTG 265
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
LIATACGDD IRIFKE ++ D +F+ + E AH+QDVN V WNPVV G L SCSD
Sbjct: 266 LIATACGDDGIRIFKETSDS-KPDEPTFEQLTAEEGAHDQDVNSVQWNPVVAGQLISCSD 324
Query: 125 DGDVKLWQI 133
DG +K+W++
Sbjct: 325 DGTIKIWKV 333
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila erecta (taxid: 7220) |
| >sp|B4KTK4|CIAO1_DROMO Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila mojavensis GN=Ciao1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 83/130 (63%), Positives = 100/130 (76%), Gaps = 1/130 (0%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G RL +CSDDAT+KIW+ Y PGN AGI TPD +VWKCVCTLSG H R IYD+SWC LT
Sbjct: 202 GERLVSCSDDATLKIWRAYHPGNEAGIATPDKTTVWKCVCTLSGLHTRAIYDVSWCKLTG 261
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
LIA+ACGDDAIRIFKE+ ++ D SF+L+ +E AH QDVN V WNPV G L SCSD
Sbjct: 262 LIASACGDDAIRIFKESSDS-KRDAPSFELLTSEESAHEQDVNAVEWNPVNVGQLISCSD 320
Query: 125 DGDVKLWQIK 134
DG +K+W+++
Sbjct: 321 DGTIKIWKLQ 330
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila mojavensis (taxid: 7230) |
| >sp|Q7K1Y4|CIAO1_DROME Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila melanogaster GN=Ciao1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 98/129 (75%), Gaps = 1/129 (0%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G RL +CSDD T+KIW+ Y PGN+AG+ TPD +VWKCVCT+SG H R IYD+SWC LT
Sbjct: 206 GERLVSCSDDTTIKIWRAYHPGNTAGVATPDQQTVWKCVCTVSGQHSRAIYDVSWCKLTG 265
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
LIATACGDD IRIFKE+ ++ D +F+ + E AH+QDVN V WNPVV G L SCSD
Sbjct: 266 LIATACGDDGIRIFKESSDS-KPDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSD 324
Query: 125 DGDVKLWQI 133
DG +K+W++
Sbjct: 325 DGTIKIWKV 333
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila melanogaster (taxid: 7227) |
| >sp|B4MY77|CIAO1_DROWI Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila willistoni GN=Ciao1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 96/129 (74%), Gaps = 1/129 (0%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G RL +CSDD T+KIW+ Y PGN AG+ TPD +VWKCVCTLSG H R IYD+SWC LT
Sbjct: 206 GERLVSCSDDTTLKIWRAYHPGNDAGVATPDKQTVWKCVCTLSGQHSRAIYDVSWCKLTG 265
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
LIATACGDD IRIFKE+ ++ D +F+ V E AH QDVN V WNPV+ G L SCSD
Sbjct: 266 LIATACGDDGIRIFKESSDS-KRDEPTFEQVTAEESAHEQDVNSVEWNPVMAGQLISCSD 324
Query: 125 DGDVKLWQI 133
DG +K+W++
Sbjct: 325 DGTIKIWKM 333
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila willistoni (taxid: 7260) |
| >sp|B4QFZ8|CIAO1_DROSI Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila simulans GN=Ciao1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 175 bits (443), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 97/129 (75%), Gaps = 1/129 (0%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G RL +CSDD T+KIWK Y PGN+AG+ TP+ +VWKCVCT+SG H R IYD+SWC LT
Sbjct: 206 GERLVSCSDDTTIKIWKAYHPGNTAGVATPEQQTVWKCVCTVSGQHSRAIYDVSWCKLTG 265
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
LIATACGDD IRIFKE ++ D +F+ + E AH+QDVN V WNPVV G L SCSD
Sbjct: 266 LIATACGDDGIRIFKETSDS-KPDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSD 324
Query: 125 DGDVKLWQI 133
DG +K+W++
Sbjct: 325 DGTIKIWKV 333
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila simulans (taxid: 7240) |
| >sp|B3MC74|CIAO1_DROAN Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila ananassae GN=Ciao1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 98/130 (75%), Gaps = 1/130 (0%)
Query: 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 63
TG RL +CSDD ++KIW+ Y PGN AG+ TPD +VWKCVCT+SG H R IYD+SWC LT
Sbjct: 205 TGERLVSCSDDTSLKIWQAYHPGNDAGVATPDKQTVWKCVCTISGQHSRAIYDVSWCKLT 264
Query: 64 DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 123
+LIATACGDD IRIFKE ++ D +F+ + E AH+QDVN V WNPVV G L SCS
Sbjct: 265 NLIATACGDDGIRIFKETSDS-KRDEPTFEQLTAEEGAHDQDVNSVEWNPVVEGQLISCS 323
Query: 124 DDGDVKLWQI 133
DDG +K+W++
Sbjct: 324 DDGTIKVWKM 333
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila ananassae (taxid: 7217) |
| >sp|B4HRQ6|CIAO1_DROSE Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila sechellia GN=Ciao1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 78/129 (60%), Positives = 97/129 (75%), Gaps = 1/129 (0%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G RL +CSDD T+KIW+ Y PGN+AG+ TP+ +VWKCVCT+SG H R IYD+SWC LT
Sbjct: 206 GERLVSCSDDTTIKIWRAYHPGNTAGVATPEQQTVWKCVCTVSGQHSRAIYDVSWCKLTG 265
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
LIATACGDD IRIFKE ++ D +F+ + E AH+QDVN V WNPVV G L SCSD
Sbjct: 266 LIATACGDDGIRIFKETSDS-KPDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSD 324
Query: 125 DGDVKLWQI 133
DG +K+W++
Sbjct: 325 DGTIKIWKV 333
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila sechellia (taxid: 7238) |
| >sp|O76071|CIAO1_HUMAN Probable cytosolic iron-sulfur protein assembly protein CIAO1 OS=Homo sapiens GN=CIAO1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 78/131 (59%), Positives = 99/131 (75%), Gaps = 1/131 (0%)
Query: 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 63
+G RLA+CSDD TV+IW++Y PGN G+ +D WKC+CTLSG H RTIYDI+WC LT
Sbjct: 205 SGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLT 264
Query: 64 DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 123
+ATACGDDAIR+F+E+P + D +F L H+AH+QDVNCVAWNP PG+LASCS
Sbjct: 265 GALATACGDDAIRVFQEDPNS-DPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCS 323
Query: 124 DDGDVKLWQIK 134
DDG+V W+ +
Sbjct: 324 DDGEVAFWKYQ 334
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Seems to specifically modulate the transactivation activity of WT1. As part of the mitotic spindle-associated MMXD complex it may play a role in chromosome segregation. Homo sapiens (taxid: 9606) |
| >sp|B4JW81|CIAO1_DROGR Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila grimshawi GN=Ciao1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 97/130 (74%), Gaps = 1/130 (0%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G RL +CSDD T+KIW+ Y PGN AGI TPD +VWKCVCT++G H R +YD+SWC LT
Sbjct: 202 GERLVSCSDDTTLKIWRAYHPGNEAGIATPDKTTVWKCVCTVAGQHSRAVYDVSWCKLTG 261
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
LIA+ACGDD IRIFKE+ ++ D +F+L+ E AH QDVN V WNPV G L SCSD
Sbjct: 262 LIASACGDDGIRIFKESSDS-KRDEPTFELLTAEESAHEQDVNAVEWNPVTAGQLISCSD 320
Query: 125 DGDVKLWQIK 134
DG +K+W+++
Sbjct: 321 DGTIKIWKLQ 330
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila grimshawi (taxid: 7222) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 138 | ||||||
| 195486114 | 335 | GE12280 [Drosophila yakuba] gi|257096281 | 0.927 | 0.382 | 0.635 | 6e-43 | |
| 194882955 | 335 | GG22391 [Drosophila erecta] gi|257096274 | 0.927 | 0.382 | 0.635 | 8e-43 | |
| 195122304 | 331 | GI18956 [Drosophila mojavensis] gi|25709 | 0.934 | 0.389 | 0.638 | 9e-43 | |
| 332019251 | 386 | Putative cytosolic iron-sulfur protein a | 0.927 | 0.331 | 0.635 | 3e-42 | |
| 19922278 | 335 | Ciao1 [Drosophila melanogaster] gi|12208 | 0.927 | 0.382 | 0.612 | 4e-42 | |
| 195436246 | 335 | GK22124 [Drosophila willistoni] gi|25709 | 0.927 | 0.382 | 0.620 | 5e-42 | |
| 402891588 | 414 | PREDICTED: probable cytosolic iron-sulfu | 0.942 | 0.314 | 0.595 | 6e-42 | |
| 195583506 | 335 | GD25651 [Drosophila simulans] gi|2570962 | 0.927 | 0.382 | 0.612 | 6e-42 | |
| 397468190 | 339 | PREDICTED: probable cytosolic iron-sulfu | 0.942 | 0.383 | 0.603 | 1e-41 | |
| 194754134 | 335 | GF12085 [Drosophila ananassae] gi|257096 | 0.934 | 0.385 | 0.607 | 1e-41 |
| >gi|195486114|ref|XP_002091367.1| GE12280 [Drosophila yakuba] gi|257096281|sp|B4P7Q3.1|CIAO1_DROYA RecName: Full=Probable cytosolic iron-sulfur protein assembly protein Ciao1 gi|194177468|gb|EDW91079.1| GE12280 [Drosophila yakuba] | Back alignment and taxonomy information |
|---|
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 82/129 (63%), Positives = 97/129 (75%), Gaps = 1/129 (0%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G RL +CSDD TVKIW+ Y PGNSAG+ TPD +VWKCVCTLSG H R IYD+SWC LT
Sbjct: 206 GERLVSCSDDTTVKIWRAYHPGNSAGVATPDQQTVWKCVCTLSGQHSRAIYDVSWCKLTG 265
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
LIATACGDD IRIFKE ++ D +F+ + E AH+QDVN V WNPVV G L SCSD
Sbjct: 266 LIATACGDDGIRIFKETSDS-KPDEPTFEQLTAEESAHDQDVNSVQWNPVVAGQLISCSD 324
Query: 125 DGDVKLWQI 133
DG +K+W++
Sbjct: 325 DGTIKIWKV 333
|
Source: Drosophila yakuba Species: Drosophila yakuba Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|194882955|ref|XP_001975575.1| GG22391 [Drosophila erecta] gi|257096274|sp|B3NQR5.1|CIAO1_DROER RecName: Full=Probable cytosolic iron-sulfur protein assembly protein Ciao1 gi|190658762|gb|EDV55975.1| GG22391 [Drosophila erecta] | Back alignment and taxonomy information |
|---|
Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 82/129 (63%), Positives = 97/129 (75%), Gaps = 1/129 (0%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G RL +CSDD T+KIWK Y PGNSAG+ TPD +VWKCVCTLSG H R IYD+SWC LT
Sbjct: 206 GERLVSCSDDTTIKIWKAYHPGNSAGVATPDQQTVWKCVCTLSGQHSRAIYDVSWCKLTG 265
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
LIATACGDD IRIFKE ++ D +F+ + E AH+QDVN V WNPVV G L SCSD
Sbjct: 266 LIATACGDDGIRIFKETSDS-KPDEPTFEQLTAEEGAHDQDVNSVQWNPVVAGQLISCSD 324
Query: 125 DGDVKLWQI 133
DG +K+W++
Sbjct: 325 DGTIKIWKV 333
|
Source: Drosophila erecta Species: Drosophila erecta Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195122304|ref|XP_002005652.1| GI18956 [Drosophila mojavensis] gi|257096276|sp|B4KTK4.1|CIAO1_DROMO RecName: Full=Probable cytosolic iron-sulfur protein assembly protein Ciao1 gi|193910720|gb|EDW09587.1| GI18956 [Drosophila mojavensis] | Back alignment and taxonomy information |
|---|
Score = 177 bits (450), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 83/130 (63%), Positives = 100/130 (76%), Gaps = 1/130 (0%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G RL +CSDDAT+KIW+ Y PGN AGI TPD +VWKCVCTLSG H R IYD+SWC LT
Sbjct: 202 GERLVSCSDDATLKIWRAYHPGNEAGIATPDKTTVWKCVCTLSGLHTRAIYDVSWCKLTG 261
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
LIA+ACGDDAIRIFKE+ ++ D SF+L+ +E AH QDVN V WNPV G L SCSD
Sbjct: 262 LIASACGDDAIRIFKESSDS-KRDAPSFELLTSEESAHEQDVNAVEWNPVNVGQLISCSD 320
Query: 125 DGDVKLWQIK 134
DG +K+W+++
Sbjct: 321 DGTIKIWKLQ 330
|
Source: Drosophila mojavensis Species: Drosophila mojavensis Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332019251|gb|EGI59760.1| Putative cytosolic iron-sulfur protein assembly protein Ciao1 [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/129 (63%), Positives = 100/129 (77%), Gaps = 1/129 (0%)
Query: 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL 62
+ G+R+ATCSDD TVKIW+EYKPGN GI TP+N+SVWKC+CTLSG+H RTIYDI WC +
Sbjct: 255 KIGNRIATCSDDKTVKIWREYKPGNDMGIVTPNNESVWKCICTLSGYHTRTIYDIDWCKI 314
Query: 63 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC 122
T L+ TACGDD IRIFKE+ + D SF ++ + + AH QDVNCV WNP +PG LAS
Sbjct: 315 TGLLVTACGDDIIRIFKEDSDC-DPHQPSFTMICSINSAHAQDVNCVQWNPTIPGQLASA 373
Query: 123 SDDGDVKLW 131
SDD VK+W
Sbjct: 374 SDDSTVKIW 382
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|19922278|ref|NP_610996.1| Ciao1 [Drosophila melanogaster] gi|122087221|sp|Q7K1Y4.1|CIAO1_DROME RecName: Full=Probable cytosolic iron-sulfur protein assembly protein Ciao1 gi|7303130|gb|AAF58195.1| Ciao1 [Drosophila melanogaster] gi|16769434|gb|AAL28936.1| LD31217p [Drosophila melanogaster] gi|220944660|gb|ACL84873.1| Ciao1-PA [synthetic construct] gi|220954454|gb|ACL89770.1| Ciao1-PA [synthetic construct] | Back alignment and taxonomy information |
|---|
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 98/129 (75%), Gaps = 1/129 (0%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G RL +CSDD T+KIW+ Y PGN+AG+ TPD +VWKCVCT+SG H R IYD+SWC LT
Sbjct: 206 GERLVSCSDDTTIKIWRAYHPGNTAGVATPDQQTVWKCVCTVSGQHSRAIYDVSWCKLTG 265
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
LIATACGDD IRIFKE+ ++ D +F+ + E AH+QDVN V WNPVV G L SCSD
Sbjct: 266 LIATACGDDGIRIFKESSDS-KPDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSD 324
Query: 125 DGDVKLWQI 133
DG +K+W++
Sbjct: 325 DGTIKIWKV 333
|
Source: Drosophila melanogaster Species: Drosophila melanogaster Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195436246|ref|XP_002066080.1| GK22124 [Drosophila willistoni] gi|257096280|sp|B4MY77.1|CIAO1_DROWI RecName: Full=Probable cytosolic iron-sulfur protein assembly protein Ciao1 gi|194162165|gb|EDW77066.1| GK22124 [Drosophila willistoni] | Back alignment and taxonomy information |
|---|
Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 96/129 (74%), Gaps = 1/129 (0%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G RL +CSDD T+KIW+ Y PGN AG+ TPD +VWKCVCTLSG H R IYD+SWC LT
Sbjct: 206 GERLVSCSDDTTLKIWRAYHPGNDAGVATPDKQTVWKCVCTLSGQHSRAIYDVSWCKLTG 265
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
LIATACGDD IRIFKE+ ++ D +F+ V E AH QDVN V WNPV+ G L SCSD
Sbjct: 266 LIATACGDDGIRIFKESSDS-KRDEPTFEQVTAEESAHEQDVNSVEWNPVMAGQLISCSD 324
Query: 125 DGDVKLWQI 133
DG +K+W++
Sbjct: 325 DGTIKIWKM 333
|
Source: Drosophila willistoni Species: Drosophila willistoni Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|402891588|ref|XP_003909025.1| PREDICTED: probable cytosolic iron-sulfur protein assembly protein CIAO1 [Papio anubis] | Back alignment and taxonomy information |
|---|
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 78/131 (59%), Positives = 99/131 (75%), Gaps = 1/131 (0%)
Query: 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 63
+G RLA+CSDD TV+IW++Y PGN G+ +D WKC+CTLSG H RTIYDI+WC LT
Sbjct: 280 SGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLT 339
Query: 64 DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 123
+ATACGDDAIR+F+E+P + D +F L H+AH+QDVNCVAWNP PG+LASCS
Sbjct: 340 GALATACGDDAIRVFQEDPNS-DPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCS 398
Query: 124 DDGDVKLWQIK 134
DDG+V W+ +
Sbjct: 399 DDGEVAFWKYQ 409
|
Source: Papio anubis Species: Papio anubis Genus: Papio Family: Cercopithecidae Order: Primates Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|195583506|ref|XP_002081558.1| GD25651 [Drosophila simulans] gi|257096278|sp|B4QFZ8.1|CIAO1_DROSI RecName: Full=Probable cytosolic iron-sulfur protein assembly protein Ciao1 gi|194193567|gb|EDX07143.1| GD25651 [Drosophila simulans] | Back alignment and taxonomy information |
|---|
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 97/129 (75%), Gaps = 1/129 (0%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G RL +CSDD T+KIWK Y PGN+AG+ TP+ +VWKCVCT+SG H R IYD+SWC LT
Sbjct: 206 GERLVSCSDDTTIKIWKAYHPGNTAGVATPEQQTVWKCVCTVSGQHSRAIYDVSWCKLTG 265
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
LIATACGDD IRIFKE ++ D +F+ + E AH+QDVN V WNPVV G L SCSD
Sbjct: 266 LIATACGDDGIRIFKETSDS-KPDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSD 324
Query: 125 DGDVKLWQI 133
DG +K+W++
Sbjct: 325 DGTIKIWKV 333
|
Source: Drosophila simulans Species: Drosophila simulans Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|397468190|ref|XP_003805776.1| PREDICTED: probable cytosolic iron-sulfur protein assembly protein CIAO1 [Pan paniscus] | Back alignment and taxonomy information |
|---|
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 79/131 (60%), Positives = 99/131 (75%), Gaps = 1/131 (0%)
Query: 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 63
+G RLA+CSDD TV+IW++Y PGN G+ +D WKCVCTLSG H RTIYDI+WC LT
Sbjct: 205 SGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCVCTLSGFHSRTIYDIAWCQLT 264
Query: 64 DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 123
+ATACGDDAIR+F+E+P + D +F L H+AH+QDVNCVAWNP PG+LASCS
Sbjct: 265 GALATACGDDAIRVFQEDPNS-DPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCS 323
Query: 124 DDGDVKLWQIK 134
DDG+V W+ +
Sbjct: 324 DDGEVAFWKYQ 334
|
Source: Pan paniscus Species: Pan paniscus Genus: Pan Family: Hominidae Order: Primates Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|194754134|ref|XP_001959352.1| GF12085 [Drosophila ananassae] gi|257096273|sp|B3MC74.1|CIAO1_DROAN RecName: Full=Probable cytosolic iron-sulfur protein assembly protein Ciao1 gi|190620650|gb|EDV36174.1| GF12085 [Drosophila ananassae] | Back alignment and taxonomy information |
|---|
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 98/130 (75%), Gaps = 1/130 (0%)
Query: 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 63
TG RL +CSDD ++KIW+ Y PGN AG+ TPD +VWKCVCT+SG H R IYD+SWC LT
Sbjct: 205 TGERLVSCSDDTSLKIWQAYHPGNDAGVATPDKQTVWKCVCTISGQHSRAIYDVSWCKLT 264
Query: 64 DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 123
+LIATACGDD IRIFKE ++ D +F+ + E AH+QDVN V WNPVV G L SCS
Sbjct: 265 NLIATACGDDGIRIFKETSDS-KRDEPTFEQLTAEEGAHDQDVNSVEWNPVVEGQLISCS 323
Query: 124 DDGDVKLWQI 133
DDG +K+W++
Sbjct: 324 DDGTIKVWKM 333
|
Source: Drosophila ananassae Species: Drosophila ananassae Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 138 | ||||||
| UNIPROTKB|B3NQR5 | 335 | Ciao1 "Probable cytosolic iron | 0.927 | 0.382 | 0.635 | 7.1e-45 | |
| UNIPROTKB|B4P7Q3 | 335 | Ciao1 "Probable cytosolic iron | 0.927 | 0.382 | 0.635 | 9.1e-45 | |
| UNIPROTKB|B4KTK4 | 331 | Ciao1 "Probable cytosolic iron | 0.934 | 0.389 | 0.638 | 2.4e-44 | |
| FB|FBgn0033972 | 335 | Ciao1 "Ciao1" [Drosophila mela | 0.927 | 0.382 | 0.612 | 3.1e-44 | |
| UNIPROTKB|B4QFZ8 | 335 | Ciao1 "Probable cytosolic iron | 0.927 | 0.382 | 0.612 | 5e-44 | |
| UNIPROTKB|B4MY77 | 335 | Ciao1 "Probable cytosolic iron | 0.927 | 0.382 | 0.620 | 8.1e-44 | |
| UNIPROTKB|O76071 | 339 | CIAO1 "Probable cytosolic iron | 0.927 | 0.377 | 0.604 | 1e-43 | |
| UNIPROTKB|B4HRQ6 | 335 | Ciao1 "Probable cytosolic iron | 0.927 | 0.382 | 0.604 | 1e-43 | |
| UNIPROTKB|B3MC74 | 335 | Ciao1 "Probable cytosolic iron | 0.934 | 0.385 | 0.607 | 1.3e-43 | |
| UNIPROTKB|B4GDM7 | 335 | Ciao1 "Probable cytosolic iron | 0.927 | 0.382 | 0.620 | 1.7e-43 |
| UNIPROTKB|B3NQR5 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Drosophila erecta (taxid:7220)] | Back alignment and assigned GO terms |
|---|
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 82/129 (63%), Positives = 97/129 (75%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G RL +CSDD T+KIWK Y PGNSAG+ TPD +VWKCVCTLSG H R IYD+SWC LT
Sbjct: 206 GERLVSCSDDTTIKIWKAYHPGNSAGVATPDQQTVWKCVCTLSGQHSRAIYDVSWCKLTG 265
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
LIATACGDD IRIFKE ++ D +F+ + E AH+QDVN V WNPVV G L SCSD
Sbjct: 266 LIATACGDDGIRIFKETSDS-KPDEPTFEQLTAEEGAHDQDVNSVQWNPVVAGQLISCSD 324
Query: 125 DGDVKLWQI 133
DG +K+W++
Sbjct: 325 DGTIKIWKV 333
|
|
| UNIPROTKB|B4P7Q3 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Drosophila yakuba (taxid:7245)] | Back alignment and assigned GO terms |
|---|
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 82/129 (63%), Positives = 97/129 (75%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G RL +CSDD TVKIW+ Y PGNSAG+ TPD +VWKCVCTLSG H R IYD+SWC LT
Sbjct: 206 GERLVSCSDDTTVKIWRAYHPGNSAGVATPDQQTVWKCVCTLSGQHSRAIYDVSWCKLTG 265
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
LIATACGDD IRIFKE ++ D +F+ + E AH+QDVN V WNPVV G L SCSD
Sbjct: 266 LIATACGDDGIRIFKETSDS-KPDEPTFEQLTAEESAHDQDVNSVQWNPVVAGQLISCSD 324
Query: 125 DGDVKLWQI 133
DG +K+W++
Sbjct: 325 DGTIKIWKV 333
|
|
| UNIPROTKB|B4KTK4 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Drosophila mojavensis (taxid:7230)] | Back alignment and assigned GO terms |
|---|
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 83/130 (63%), Positives = 100/130 (76%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G RL +CSDDAT+KIW+ Y PGN AGI TPD +VWKCVCTLSG H R IYD+SWC LT
Sbjct: 202 GERLVSCSDDATLKIWRAYHPGNEAGIATPDKTTVWKCVCTLSGLHTRAIYDVSWCKLTG 261
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
LIA+ACGDDAIRIFKE+ ++ D SF+L+ +E AH QDVN V WNPV G L SCSD
Sbjct: 262 LIASACGDDAIRIFKESSDS-KRDAPSFELLTSEESAHEQDVNAVEWNPVNVGQLISCSD 320
Query: 125 DGDVKLWQIK 134
DG +K+W+++
Sbjct: 321 DGTIKIWKLQ 330
|
|
| FB|FBgn0033972 Ciao1 "Ciao1" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 79/129 (61%), Positives = 98/129 (75%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G RL +CSDD T+KIW+ Y PGN+AG+ TPD +VWKCVCT+SG H R IYD+SWC LT
Sbjct: 206 GERLVSCSDDTTIKIWRAYHPGNTAGVATPDQQTVWKCVCTVSGQHSRAIYDVSWCKLTG 265
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
LIATACGDD IRIFKE+ ++ D +F+ + E AH+QDVN V WNPVV G L SCSD
Sbjct: 266 LIATACGDDGIRIFKESSDS-KPDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSD 324
Query: 125 DGDVKLWQI 133
DG +K+W++
Sbjct: 325 DGTIKIWKV 333
|
|
| UNIPROTKB|B4QFZ8 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Drosophila simulans (taxid:7240)] | Back alignment and assigned GO terms |
|---|
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 79/129 (61%), Positives = 97/129 (75%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G RL +CSDD T+KIWK Y PGN+AG+ TP+ +VWKCVCT+SG H R IYD+SWC LT
Sbjct: 206 GERLVSCSDDTTIKIWKAYHPGNTAGVATPEQQTVWKCVCTVSGQHSRAIYDVSWCKLTG 265
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
LIATACGDD IRIFKE ++ D +F+ + E AH+QDVN V WNPVV G L SCSD
Sbjct: 266 LIATACGDDGIRIFKETSDS-KPDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSD 324
Query: 125 DGDVKLWQI 133
DG +K+W++
Sbjct: 325 DGTIKIWKV 333
|
|
| UNIPROTKB|B4MY77 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Drosophila willistoni (taxid:7260)] | Back alignment and assigned GO terms |
|---|
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 80/129 (62%), Positives = 96/129 (74%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G RL +CSDD T+KIW+ Y PGN AG+ TPD +VWKCVCTLSG H R IYD+SWC LT
Sbjct: 206 GERLVSCSDDTTLKIWRAYHPGNDAGVATPDKQTVWKCVCTLSGQHSRAIYDVSWCKLTG 265
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
LIATACGDD IRIFKE+ ++ D +F+ V E AH QDVN V WNPV+ G L SCSD
Sbjct: 266 LIATACGDDGIRIFKESSDS-KRDEPTFEQVTAEESAHEQDVNSVEWNPVMAGQLISCSD 324
Query: 125 DGDVKLWQI 133
DG +K+W++
Sbjct: 325 DGTIKIWKM 333
|
|
| UNIPROTKB|O76071 CIAO1 "Probable cytosolic iron-sulfur protein assembly protein CIAO1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 78/129 (60%), Positives = 98/129 (75%)
Query: 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 63
+G RLA+CSDD TV+IW++Y PGN G+ +D WKC+CTLSG H RTIYDI+WC LT
Sbjct: 205 SGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLT 264
Query: 64 DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 123
+ATACGDDAIR+F+E+P + D +F L H+AH+QDVNCVAWNP PG+LASCS
Sbjct: 265 GALATACGDDAIRVFQEDPNS-DPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCS 323
Query: 124 DDGDVKLWQ 132
DDG+V W+
Sbjct: 324 DDGEVAFWK 332
|
|
| UNIPROTKB|B4HRQ6 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Drosophila sechellia (taxid:7238)] | Back alignment and assigned GO terms |
|---|
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 78/129 (60%), Positives = 97/129 (75%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G RL +CSDD T+KIW+ Y PGN+AG+ TP+ +VWKCVCT+SG H R IYD+SWC LT
Sbjct: 206 GERLVSCSDDTTIKIWRAYHPGNTAGVATPEQQTVWKCVCTVSGQHSRAIYDVSWCKLTG 265
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
LIATACGDD IRIFKE ++ D +F+ + E AH+QDVN V WNPVV G L SCSD
Sbjct: 266 LIATACGDDGIRIFKETSDS-KPDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSD 324
Query: 125 DGDVKLWQI 133
DG +K+W++
Sbjct: 325 DGTIKIWKV 333
|
|
| UNIPROTKB|B3MC74 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Drosophila ananassae (taxid:7217)] | Back alignment and assigned GO terms |
|---|
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 79/130 (60%), Positives = 98/130 (75%)
Query: 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 63
TG RL +CSDD ++KIW+ Y PGN AG+ TPD +VWKCVCT+SG H R IYD+SWC LT
Sbjct: 205 TGERLVSCSDDTSLKIWQAYHPGNDAGVATPDKQTVWKCVCTISGQHSRAIYDVSWCKLT 264
Query: 64 DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 123
+LIATACGDD IRIFKE ++ D +F+ + E AH+QDVN V WNPVV G L SCS
Sbjct: 265 NLIATACGDDGIRIFKETSDS-KRDEPTFEQLTAEEGAHDQDVNSVEWNPVVEGQLISCS 323
Query: 124 DDGDVKLWQI 133
DDG +K+W++
Sbjct: 324 DDGTIKVWKM 333
|
|
| UNIPROTKB|B4GDM7 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Drosophila persimilis (taxid:7234)] | Back alignment and assigned GO terms |
|---|
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 80/129 (62%), Positives = 93/129 (72%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G RL +CSDD T+KIW+ Y PGN AGI TPD SVWKCVCTLSG H R IYD+SWC LT
Sbjct: 206 GDRLVSCSDDKTLKIWRAYHPGNDAGIATPDKQSVWKCVCTLSGQHSRAIYDVSWCKLTG 265
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
LIAT CGDD IRIFKE ++ D +F+ + E AH QDVN V WNP V G L SCSD
Sbjct: 266 LIATGCGDDGIRIFKETSDS-KRDEPTFEQLTAEETAHEQDVNAVEWNPAVAGQLISCSD 324
Query: 125 DGDVKLWQI 133
DG +K+W++
Sbjct: 325 DGTIKIWKV 333
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q7PS24 | CIAO1_ANOGA | No assigned EC number | 0.5813 | 0.9202 | 0.3724 | yes | N/A |
| Q5M7T1 | CIAO1_RAT | No assigned EC number | 0.5891 | 0.9275 | 0.3775 | yes | N/A |
| Q292E8 | CIAO1_DROPS | No assigned EC number | 0.6201 | 0.9275 | 0.3820 | yes | N/A |
| Q99KN2 | CIAO1_MOUSE | No assigned EC number | 0.5891 | 0.9275 | 0.3775 | yes | N/A |
| O76071 | CIAO1_HUMAN | No assigned EC number | 0.5954 | 0.9420 | 0.3834 | yes | N/A |
| Q7K1Y4 | CIAO1_DROME | No assigned EC number | 0.6124 | 0.9275 | 0.3820 | yes | N/A |
| Q28DW0 | CIAO1_XENTR | No assigned EC number | 0.5378 | 0.9202 | 0.3813 | yes | N/A |
| Q6P0D9 | CIAO1_DANRE | No assigned EC number | 0.5625 | 0.8768 | 0.3666 | yes | N/A |
| Q32PJ6 | CIAO1_BOVIN | No assigned EC number | 0.5648 | 0.9420 | 0.3834 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 138 | |||
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 7e-13 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 3e-12 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 9e-12 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 2e-11 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 5e-08 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-06 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 4e-06 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-05 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 3e-05 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 1e-04 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 0.002 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 63.5 bits (155), Expect = 7e-13
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 27/127 (21%)
Query: 8 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA 67
L++ S D T+K+W + T KC+ TL GH + +++ +A
Sbjct: 108 LSSSSRDKTIKVWD---------VETG------KCLTTLRGHTD-WVNSVAFSPDGTFVA 151
Query: 68 TACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGD 127
++ D I+++ D+ + V T H +VN VA++P L S S DG
Sbjct: 152 SSSQDGTIKLW---------DLRTGKCVAT-LTGHTGEVNSVAFSP-DGEKLLSSSSDGT 200
Query: 128 VKLWQIK 134
+KLW +
Sbjct: 201 IKLWDLS 207
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 61.6 bits (150), Expect = 3e-12
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 27/129 (20%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G LAT S D T+K+W + G + + TL GH G + D++
Sbjct: 21 GKLLATGSGDGTIKVWD-LETG--------------ELLRTLKGHTG-PVRDVAASADGT 64
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
+A+ D IR++ D+ + + V T H V+ VA++P +L+S S
Sbjct: 65 YLASGSSDKTIRLW---------DLETGECVRT-LTGHTSYVSSVAFSP-DGRILSSSSR 113
Query: 125 DGDVKLWQI 133
D +K+W +
Sbjct: 114 DKTIKVWDV 122
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 9e-12
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 27/129 (20%)
Query: 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 63
G +L + S D T+K+W + S KC+ TL G H + +++
Sbjct: 188 DGEKLLSSSSDGTIKLW---------------DLSTGKCLGTLRG-HENGVNSVAFSPDG 231
Query: 64 DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 123
L+A+ D IR++ D+ + + V T H V +AW+P LAS S
Sbjct: 232 YLLASGSEDGTIRVW---------DLRTGECVQT-LSGHTNSVTSLAWSP-DGKRLASGS 280
Query: 124 DDGDVKLWQ 132
DG +++W
Sbjct: 281 ADGTIRIWD 289
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 59.3 bits (144), Expect = 2e-11
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 27/132 (20%)
Query: 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL 62
G+ +A+ S D T+K+W + KCV TL+GH G + +++
Sbjct: 145 PDGTFVASSSQDGTIKLW---------------DLRTGKCVATLTGHTG-EVNSVAFSPD 188
Query: 63 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC 122
+ + ++ D I+++ D+ + + T R H VN VA++P +LAS
Sbjct: 189 GEKLLSSSSDGTIKLW---------DLSTGKCLGT-LRGHENGVNSVAFSP-DGYLLASG 237
Query: 123 SDDGDVKLWQIK 134
S+DG +++W ++
Sbjct: 238 SEDGTIRVWDLR 249
|
Length = 289 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 50.1 bits (118), Expect = 5e-08
Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 23/133 (17%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
GS LA+ S D T+++W D S + TLSGH + +++
Sbjct: 253 GSLLASGSSDGTIRLW--------------DLRSSSSLLRTLSGHSSS-VLSVAFSPDGK 297
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
L+A+ D +R++ L + H V+ ++++P +++ SD
Sbjct: 298 LLASGSSDGTVRLWDLET--------GKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSD 349
Query: 125 DGDVKLWQIKLEN 137
DG ++LW ++
Sbjct: 350 DGTIRLWDLRTGK 362
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 45.5 bits (106), Expect = 2e-06
Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 26/128 (20%)
Query: 8 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA 67
LA+ S D TVK+W D + K + TL GH + +++ L+A
Sbjct: 127 LASSSLDGTVKLW--------------DLSTPGKLIRTLEGHSES-VTSLAFSPDGKLLA 171
Query: 68 TACGDD-AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG 126
+ D I+++ D+ + + T H V+ +A++P ++AS S DG
Sbjct: 172 SGSSLDGTIKLW---------DLRTGKPLSTLA-GHTDPVSSLAFSPDGGLLIASGSSDG 221
Query: 127 DVKLWQIK 134
++LW +
Sbjct: 222 TIRLWDLS 229
|
Length = 466 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 4e-06
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 12/97 (12%)
Query: 42 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRA 101
TL GH G + +++ L+AT GD I+++ D+ + +L+ T +
Sbjct: 1 LRRTLKGHTGG-VTCVAFSPDGKLLATGSGDGTIKVW---------DLETGELLRTL-KG 49
Query: 102 HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 138
H V VA + LAS S D ++LW ++
Sbjct: 50 HTGPVRDVAASADGT-YLASGSSDKTIRLWDLETGEC 85
|
Length = 289 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.4 bits (98), Expect = 2e-05
Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 22/132 (16%)
Query: 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 63
G L + S D T+K+W D D+ K + +L G H ++ ++
Sbjct: 76 DGELLLSGSSDGTIKLW--------------DLDNGEKLIKSLEGLHDSSVSKLALSSPD 121
Query: 64 -DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC 122
+ I A + + + + + H++ V +A++P + +
Sbjct: 122 GNSILLASSSLDGTVKLWDLSTPGKLIRTLE-------GHSESVTSLAFSPDGKLLASGS 174
Query: 123 SDDGDVKLWQIK 134
S DG +KLW ++
Sbjct: 175 SLDGTIKLWDLR 186
|
Length = 466 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 3e-05
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 95 VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 131
+ + H V VA++P +LAS SDDG V++W
Sbjct: 3 LLRTLKGHTGPVTSVAFSPDGN-LLASGSDDGTVRVW 38
|
Length = 39 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 36.9 bits (86), Expect = 1e-04
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 100 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 131
+ H V VA++P LAS SDDG +KLW
Sbjct: 9 KGHTGPVTSVAFSPDGK-YLASGSDDGTIKLW 39
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 33.4 bits (77), Expect = 0.002
Identities = 8/40 (20%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 40 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79
+ + TL GH G + +++ +A+ D I+++
Sbjct: 2 GELLKTLKGHTGP-VTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 138 | |||
| KOG0271|consensus | 480 | 99.95 | ||
| KOG0272|consensus | 459 | 99.94 | ||
| KOG0263|consensus | 707 | 99.94 | ||
| KOG0266|consensus | 456 | 99.93 | ||
| KOG0279|consensus | 315 | 99.93 | ||
| KOG0263|consensus | 707 | 99.93 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.92 | |
| KOG0272|consensus | 459 | 99.92 | ||
| KOG0302|consensus | 440 | 99.91 | ||
| KOG0291|consensus | 893 | 99.91 | ||
| KOG0279|consensus | 315 | 99.91 | ||
| KOG0284|consensus | 464 | 99.91 | ||
| KOG0271|consensus | 480 | 99.9 | ||
| KOG0283|consensus | 712 | 99.9 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.89 | |
| KOG0284|consensus | 464 | 99.89 | ||
| KOG0645|consensus | 312 | 99.89 | ||
| KOG0273|consensus | 524 | 99.88 | ||
| KOG0286|consensus | 343 | 99.88 | ||
| KOG0266|consensus | 456 | 99.88 | ||
| KOG0265|consensus | 338 | 99.88 | ||
| KOG0316|consensus | 307 | 99.88 | ||
| KOG0286|consensus | 343 | 99.88 | ||
| KOG0647|consensus | 347 | 99.87 | ||
| KOG0319|consensus | 775 | 99.87 | ||
| KOG0645|consensus | 312 | 99.87 | ||
| KOG0275|consensus | 508 | 99.87 | ||
| KOG0285|consensus | 460 | 99.87 | ||
| KOG0282|consensus | 503 | 99.86 | ||
| KOG0264|consensus | 422 | 99.86 | ||
| KOG0285|consensus | 460 | 99.86 | ||
| KOG0315|consensus | 311 | 99.86 | ||
| KOG0276|consensus | 794 | 99.86 | ||
| KOG0292|consensus | 1202 | 99.86 | ||
| KOG0295|consensus | 406 | 99.85 | ||
| KOG0318|consensus | 603 | 99.85 | ||
| KOG0315|consensus | 311 | 99.85 | ||
| KOG0273|consensus | 524 | 99.85 | ||
| KOG0269|consensus | 839 | 99.85 | ||
| KOG0973|consensus | 942 | 99.84 | ||
| KOG0295|consensus | 406 | 99.84 | ||
| KOG0640|consensus | 430 | 99.84 | ||
| KOG0772|consensus | 641 | 99.84 | ||
| KOG0318|consensus | 603 | 99.84 | ||
| KOG0303|consensus | 472 | 99.83 | ||
| KOG0319|consensus | 775 | 99.83 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.83 | |
| KOG0277|consensus | 311 | 99.83 | ||
| KOG0313|consensus | 423 | 99.83 | ||
| KOG0277|consensus | 311 | 99.82 | ||
| KOG0293|consensus | 519 | 99.82 | ||
| KOG0276|consensus | 794 | 99.82 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.81 | |
| KOG0281|consensus | 499 | 99.81 | ||
| KOG0264|consensus | 422 | 99.81 | ||
| KOG0291|consensus | 893 | 99.8 | ||
| KOG0642|consensus | 577 | 99.8 | ||
| KOG0646|consensus | 476 | 99.8 | ||
| KOG0310|consensus | 487 | 99.8 | ||
| KOG0289|consensus | 506 | 99.79 | ||
| KOG1445|consensus | 1012 | 99.79 | ||
| KOG0292|consensus | 1202 | 99.79 | ||
| KOG0294|consensus | 362 | 99.79 | ||
| KOG1332|consensus | 299 | 99.79 | ||
| KOG0278|consensus | 334 | 99.79 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.79 | |
| KOG0305|consensus | 484 | 99.78 | ||
| KOG0289|consensus | 506 | 99.78 | ||
| KOG0269|consensus | 839 | 99.78 | ||
| KOG0296|consensus | 399 | 99.78 | ||
| KOG0282|consensus | 503 | 99.78 | ||
| KOG1009|consensus | 434 | 99.78 | ||
| KOG0313|consensus | 423 | 99.77 | ||
| KOG4283|consensus | 397 | 99.77 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.77 | |
| KOG0265|consensus | 338 | 99.77 | ||
| KOG0283|consensus | 712 | 99.77 | ||
| KOG0973|consensus | 942 | 99.76 | ||
| KOG2394|consensus | 636 | 99.76 | ||
| KOG0305|consensus | 484 | 99.76 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.76 | |
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.76 | |
| KOG0294|consensus | 362 | 99.76 | ||
| KOG0641|consensus | 350 | 99.76 | ||
| KOG0281|consensus | 499 | 99.76 | ||
| KOG0643|consensus | 327 | 99.75 | ||
| KOG0267|consensus | 825 | 99.75 | ||
| KOG0296|consensus | 399 | 99.75 | ||
| KOG0306|consensus | 888 | 99.75 | ||
| KOG0308|consensus | 735 | 99.74 | ||
| KOG2445|consensus | 361 | 99.74 | ||
| KOG0316|consensus | 307 | 99.74 | ||
| KOG2096|consensus | 420 | 99.74 | ||
| KOG0267|consensus | 825 | 99.73 | ||
| KOG0302|consensus | 440 | 99.73 | ||
| KOG1007|consensus | 370 | 99.73 | ||
| KOG0310|consensus | 487 | 99.73 | ||
| KOG0772|consensus | 641 | 99.73 | ||
| KOG0640|consensus | 430 | 99.72 | ||
| KOG0270|consensus | 463 | 99.72 | ||
| KOG1407|consensus | 313 | 99.72 | ||
| KOG1446|consensus | 311 | 99.72 | ||
| KOG1034|consensus | 385 | 99.72 | ||
| KOG4283|consensus | 397 | 99.72 | ||
| KOG1273|consensus | 405 | 99.71 | ||
| KOG0308|consensus | 735 | 99.71 | ||
| KOG0306|consensus | 888 | 99.7 | ||
| KOG0268|consensus | 433 | 99.7 | ||
| KOG0300|consensus | 481 | 99.7 | ||
| KOG0639|consensus | 705 | 99.7 | ||
| KOG0274|consensus | 537 | 99.7 | ||
| KOG1332|consensus | 299 | 99.69 | ||
| KOG0290|consensus | 364 | 99.69 | ||
| KOG0293|consensus | 519 | 99.69 | ||
| KOG0274|consensus | 537 | 99.69 | ||
| KOG0643|consensus | 327 | 99.69 | ||
| KOG0646|consensus | 476 | 99.68 | ||
| KOG1407|consensus | 313 | 99.68 | ||
| KOG1036|consensus | 323 | 99.67 | ||
| KOG0647|consensus | 347 | 99.67 | ||
| KOG1310|consensus | 758 | 99.67 | ||
| KOG0299|consensus | 479 | 99.66 | ||
| KOG1063|consensus | 764 | 99.66 | ||
| KOG1188|consensus | 376 | 99.64 | ||
| KOG0270|consensus | 463 | 99.64 | ||
| KOG0639|consensus | 705 | 99.63 | ||
| KOG0299|consensus | 479 | 99.63 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.63 | |
| KOG1009|consensus | 434 | 99.62 | ||
| KOG1274|consensus | 933 | 99.62 | ||
| KOG2445|consensus | 361 | 99.61 | ||
| KOG0641|consensus | 350 | 99.61 | ||
| KOG1007|consensus | 370 | 99.6 | ||
| KOG4227|consensus | 609 | 99.6 | ||
| KOG0268|consensus | 433 | 99.6 | ||
| KOG0649|consensus | 325 | 99.58 | ||
| KOG1034|consensus | 385 | 99.58 | ||
| KOG0301|consensus | 745 | 99.58 | ||
| KOG0321|consensus | 720 | 99.58 | ||
| KOG0300|consensus | 481 | 99.58 | ||
| KOG1446|consensus | 311 | 99.57 | ||
| KOG1539|consensus | 910 | 99.57 | ||
| KOG0321|consensus | 720 | 99.57 | ||
| KOG1523|consensus | 361 | 99.57 | ||
| KOG0288|consensus | 459 | 99.57 | ||
| KOG1274|consensus | 933 | 99.56 | ||
| KOG1273|consensus | 405 | 99.56 | ||
| KOG4378|consensus | 673 | 99.54 | ||
| KOG4328|consensus | 498 | 99.54 | ||
| KOG0644|consensus | 1113 | 99.54 | ||
| KOG0771|consensus | 398 | 99.54 | ||
| KOG0278|consensus | 334 | 99.54 | ||
| KOG0288|consensus | 459 | 99.53 | ||
| KOG1408|consensus | 1080 | 99.52 | ||
| KOG2110|consensus | 391 | 99.52 | ||
| KOG0275|consensus | 508 | 99.52 | ||
| KOG0307|consensus | 1049 | 99.51 | ||
| KOG4328|consensus | 498 | 99.51 | ||
| KOG0307|consensus | 1049 | 99.5 | ||
| KOG1445|consensus | 1012 | 99.5 | ||
| KOG2048|consensus | 691 | 99.5 | ||
| KOG1036|consensus | 323 | 99.49 | ||
| KOG0301|consensus | 745 | 99.48 | ||
| KOG2394|consensus | 636 | 99.47 | ||
| KOG1063|consensus | 764 | 99.47 | ||
| KOG1240|consensus | 1431 | 99.45 | ||
| KOG0322|consensus | 323 | 99.44 | ||
| KOG0650|consensus | 733 | 99.44 | ||
| KOG4378|consensus | 673 | 99.44 | ||
| KOG2919|consensus | 406 | 99.44 | ||
| KOG0290|consensus | 364 | 99.43 | ||
| KOG0303|consensus | 472 | 99.43 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.43 | |
| KOG3881|consensus | 412 | 99.43 | ||
| KOG2055|consensus | 514 | 99.42 | ||
| KOG1524|consensus | 737 | 99.41 | ||
| KOG0649|consensus | 325 | 99.41 | ||
| KOG3914|consensus | 390 | 99.4 | ||
| KOG1523|consensus | 361 | 99.4 | ||
| KOG0642|consensus | 577 | 99.4 | ||
| KOG1272|consensus | 545 | 99.4 | ||
| KOG2096|consensus | 420 | 99.39 | ||
| KOG2048|consensus | 691 | 99.38 | ||
| KOG2919|consensus | 406 | 99.38 | ||
| KOG2055|consensus | 514 | 99.38 | ||
| KOG2106|consensus | 626 | 99.38 | ||
| KOG2111|consensus | 346 | 99.37 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.36 | |
| KOG1539|consensus | 910 | 99.36 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.36 | |
| KOG1963|consensus | 792 | 99.35 | ||
| KOG0771|consensus | 398 | 99.34 | ||
| KOG1517|consensus | 1387 | 99.34 | ||
| KOG0974|consensus | 967 | 99.33 | ||
| KOG1408|consensus | 1080 | 99.33 | ||
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 99.33 | |
| KOG1587|consensus | 555 | 99.3 | ||
| KOG0974|consensus | 967 | 99.3 | ||
| KOG2106|consensus | 626 | 99.3 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.3 | |
| KOG1310|consensus | 758 | 99.27 | ||
| KOG0280|consensus | 339 | 99.24 | ||
| KOG1538|consensus | 1081 | 99.23 | ||
| KOG0322|consensus | 323 | 99.22 | ||
| KOG1064|consensus | 2439 | 99.22 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.22 | |
| KOG1188|consensus | 376 | 99.21 | ||
| KOG1517|consensus | 1387 | 99.2 | ||
| KOG2321|consensus | 703 | 99.16 | ||
| KOG1587|consensus | 555 | 99.16 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.14 | |
| KOG2041|consensus | 1189 | 99.13 | ||
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 99.12 | |
| KOG2139|consensus | 445 | 99.11 | ||
| KOG4547|consensus | 541 | 99.1 | ||
| KOG2695|consensus | 425 | 99.09 | ||
| KOG2321|consensus | 703 | 99.08 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.07 | |
| KOG0280|consensus | 339 | 99.06 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.05 | |
| KOG2110|consensus | 391 | 99.05 | ||
| KOG1524|consensus | 737 | 99.03 | ||
| KOG0650|consensus | 733 | 99.02 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.02 | |
| KOG1963|consensus | 792 | 99.0 | ||
| KOG1272|consensus | 545 | 99.0 | ||
| KOG4190|consensus | 1034 | 98.99 | ||
| KOG1538|consensus | 1081 | 98.99 | ||
| KOG4714|consensus | 319 | 98.99 | ||
| KOG4497|consensus | 447 | 98.97 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 98.97 | |
| KOG1354|consensus | 433 | 98.96 | ||
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.94 | |
| KOG1409|consensus | 404 | 98.93 | ||
| KOG4227|consensus | 609 | 98.9 | ||
| KOG1409|consensus | 404 | 98.9 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 98.9 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 98.89 | |
| KOG3881|consensus | 412 | 98.89 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 98.88 | |
| KOG2111|consensus | 346 | 98.88 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 98.87 | |
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 98.83 | |
| KOG2139|consensus | 445 | 98.83 | ||
| KOG1334|consensus | 559 | 98.83 | ||
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 98.81 | |
| KOG1354|consensus | 433 | 98.81 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 98.81 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 98.81 | |
| KOG0644|consensus | 1113 | 98.79 | ||
| KOG1240|consensus | 1431 | 98.76 | ||
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.73 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 98.73 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 98.72 | |
| KOG4532|consensus | 344 | 98.71 | ||
| KOG3914|consensus | 390 | 98.68 | ||
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 98.68 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 98.65 | |
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 98.64 | |
| KOG0309|consensus | 1081 | 98.64 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 98.63 | |
| KOG1064|consensus | 2439 | 98.63 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 98.63 | |
| KOG2066|consensus | 846 | 98.59 | ||
| KOG4714|consensus | 319 | 98.58 | ||
| KOG2315|consensus | 566 | 98.58 | ||
| KOG1334|consensus | 559 | 98.57 | ||
| KOG4547|consensus | 541 | 98.57 | ||
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 98.57 | |
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 98.56 | |
| KOG1645|consensus | 463 | 98.55 | ||
| KOG4497|consensus | 447 | 98.5 | ||
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 98.48 | |
| KOG4532|consensus | 344 | 98.45 | ||
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 98.45 | |
| KOG2695|consensus | 425 | 98.45 | ||
| KOG4640|consensus | 665 | 98.44 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 98.43 | |
| KOG3621|consensus | 726 | 98.35 | ||
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 98.33 | |
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 98.29 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 98.23 | |
| KOG4190|consensus | 1034 | 98.22 | ||
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 98.2 | |
| KOG1275|consensus | 1118 | 98.15 | ||
| KOG3617|consensus | 1416 | 98.14 | ||
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 98.11 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 98.09 | |
| KOG0882|consensus | 558 | 98.06 | ||
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 98.05 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 98.04 | |
| KOG4640|consensus | 665 | 98.01 | ||
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 97.89 | |
| KOG1912|consensus | 1062 | 97.86 | ||
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 97.85 | |
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 97.84 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 97.84 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 97.82 | |
| KOG0309|consensus | 1081 | 97.8 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 97.8 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 97.78 | |
| KOG2041|consensus | 1189 | 97.78 | ||
| KOG1645|consensus | 463 | 97.78 | ||
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 97.75 | |
| KOG2114|consensus | 933 | 97.68 | ||
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 97.67 | |
| KOG0882|consensus | 558 | 97.66 | ||
| KOG2315|consensus | 566 | 97.66 | ||
| KOG2079|consensus | 1206 | 97.64 | ||
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 97.63 | |
| KOG1275|consensus | 1118 | 97.57 | ||
| KOG2314|consensus | 698 | 97.56 | ||
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 97.51 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 97.46 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 97.43 | |
| KOG2066|consensus | 846 | 97.42 | ||
| KOG2314|consensus | 698 | 97.39 | ||
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 97.39 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 97.34 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 97.31 | |
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 97.25 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 97.24 | |
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 97.24 | |
| KOG2444|consensus | 238 | 97.19 | ||
| KOG3621|consensus | 726 | 97.19 | ||
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 97.16 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 97.08 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 96.87 | |
| KOG1912|consensus | 1062 | 96.82 | ||
| KOG3617|consensus | 1416 | 96.81 | ||
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 96.79 | |
| KOG1920|consensus | 1265 | 96.78 | ||
| KOG1832|consensus | 1516 | 96.78 | ||
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 96.74 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 96.74 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 96.7 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 96.69 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 96.69 | |
| KOG2114|consensus | 933 | 96.52 | ||
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 96.52 | |
| KOG2395|consensus | 644 | 96.44 | ||
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 96.42 | |
| KOG1832|consensus | 1516 | 96.4 | ||
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 96.34 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 96.27 | |
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 96.27 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 96.23 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 96.22 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 96.2 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 95.91 | |
| KOG2079|consensus | 1206 | 95.9 | ||
| KOG2395|consensus | 644 | 95.88 | ||
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 95.86 | |
| KOG4649|consensus | 354 | 95.83 | ||
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 95.77 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 95.67 | |
| PF11715 | 547 | Nup160: Nucleoporin Nup120/160; InterPro: IPR02171 | 95.62 | |
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 95.59 | |
| KOG1008|consensus | 783 | 95.53 | ||
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 95.49 | |
| KOG1008|consensus | 783 | 95.48 | ||
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 95.37 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 95.35 | |
| KOG1920|consensus | 1265 | 95.1 | ||
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 95.07 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 95.01 | |
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 94.98 | |
| PF14761 | 215 | HPS3_N: Hermansky-Pudlak syndrome 3 | 94.63 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 94.58 | |
| KOG3630|consensus | 1405 | 94.33 | ||
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 94.23 | |
| KOG2444|consensus | 238 | 94.17 | ||
| KOG1916|consensus | 1283 | 94.14 | ||
| PF11715 | 547 | Nup160: Nucleoporin Nup120/160; InterPro: IPR02171 | 93.8 | |
| KOG1916|consensus | 1283 | 93.71 | ||
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 93.43 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 93.28 | |
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 93.27 | |
| KOG4649|consensus | 354 | 92.87 | ||
| KOG3630|consensus | 1405 | 92.52 | ||
| PHA02713 | 557 | hypothetical protein; Provisional | 92.41 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 92.13 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 92.07 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 91.72 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 91.61 | |
| KOG4460|consensus | 741 | 91.57 | ||
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 91.54 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 91.34 | |
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 90.95 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 90.79 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 90.76 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 90.46 | |
| KOG4499|consensus | 310 | 90.03 | ||
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 89.87 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 89.85 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 89.7 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 89.59 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 89.41 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 89.07 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 89.03 | |
| PF07250 | 243 | Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP | 88.17 | |
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 87.6 | |
| KOG2377|consensus | 657 | 87.47 | ||
| KOG4460|consensus | 741 | 87.1 | ||
| smart00564 | 33 | PQQ beta-propeller repeat. Beta-propeller repeat o | 86.8 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 86.71 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 86.54 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 86.51 | |
| PF14727 | 418 | PHTB1_N: PTHB1 N-terminus | 86.43 | |
| KOG1900|consensus | 1311 | 85.82 | ||
| PF14781 | 136 | BBS2_N: Ciliary BBSome complex subunit 2, N-termin | 85.71 | |
| PF01436 | 28 | NHL: NHL repeat; InterPro: IPR001258 The NHL repea | 85.08 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 84.75 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 84.58 | |
| PF12657 | 173 | TFIIIC_delta: Transcription factor IIIC subunit de | 84.57 | |
| KOG2247|consensus | 615 | 84.48 | ||
| PF01011 | 38 | PQQ: PQQ enzyme repeat family.; InterPro: IPR00237 | 84.46 | |
| PF10584 | 23 | Proteasome_A_N: Proteasome subunit A N-terminal si | 84.31 | |
| PF14761 | 215 | HPS3_N: Hermansky-Pudlak syndrome 3 | 83.86 | |
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 83.57 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 83.55 | |
| PF13570 | 40 | PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A. | 83.47 | |
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 83.07 | |
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 81.64 |
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=147.24 Aligned_cols=112 Identities=31% Similarity=0.534 Sum_probs=99.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|+|..||||+.|.++|+||+... .+..+.++ |...|.|++|+|||..|++|+.||+|++||.
T Consensus 123 fsp~g~~l~tGsGD~TvR~WD~~Te---------------Tp~~t~Kg-H~~WVlcvawsPDgk~iASG~~dg~I~lwdp 186 (480)
T KOG0271|consen 123 FSPTGSRLVTGSGDTTVRLWDLDTE---------------TPLFTCKG-HKNWVLCVAWSPDGKKIASGSKDGSIRLWDP 186 (480)
T ss_pred ecCCCceEEecCCCceEEeeccCCC---------------CcceeecC-CccEEEEEEECCCcchhhccccCCeEEEecC
Confidence 7999999999999999999997544 44788999 9999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccC----CCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV----VPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..++ .....+.+|...|++++|.|- ..+.|++++.||.++|||+..++
T Consensus 187 ktg~---------~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~ 238 (480)
T KOG0271|consen 187 KTGQ---------QIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGT 238 (480)
T ss_pred CCCC---------cccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCce
Confidence 8877 455667799999999999873 26799999999999999987653
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.4e-27 Score=146.18 Aligned_cols=110 Identities=23% Similarity=0.344 Sum_probs=99.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|+|++|+|+|.|.+-++||++.... +....+ |...|.+++|+++|.++++|+.|..-+|||+
T Consensus 269 fHPsG~~L~TasfD~tWRlWD~~tk~E---------------lL~QEG-Hs~~v~~iaf~~DGSL~~tGGlD~~~RvWDl 332 (459)
T KOG0272|consen 269 FHPSGKFLGTASFDSTWRLWDLETKSE---------------LLLQEG-HSKGVFSIAFQPDGSLAATGGLDSLGRVWDL 332 (459)
T ss_pred ecCCCceeeecccccchhhcccccchh---------------hHhhcc-cccccceeEecCCCceeeccCccchhheeec
Confidence 799999999999999999999866543 455567 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.+. ....+.+|...|..+.|+|+ +..+++|+.|++++|||+|...
T Consensus 333 Rtgr----------~im~L~gH~k~I~~V~fsPN-Gy~lATgs~Dnt~kVWDLR~r~ 378 (459)
T KOG0272|consen 333 RTGR----------CIMFLAGHIKEILSVAFSPN-GYHLATGSSDNTCKVWDLRMRS 378 (459)
T ss_pred ccCc----------EEEEecccccceeeEeECCC-ceEEeecCCCCcEEEeeecccc
Confidence 9998 55566789999999999999 9999999999999999998754
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-26 Score=151.43 Aligned_cols=108 Identities=20% Similarity=0.378 Sum_probs=99.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|+..|+||||.|.+||+||.... ..++.|.+ |+++|.+++|+|.|.++++|+.|+.|.+||+
T Consensus 543 FHPNs~Y~aTGSsD~tVRlWDv~~G---------------~~VRiF~G-H~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl 606 (707)
T KOG0263|consen 543 FHPNSNYVATGSSDRTVRLWDVSTG---------------NSVRIFTG-HKGPVTALAFSPCGRYLASGDEDGLIKIWDL 606 (707)
T ss_pred ECCcccccccCCCCceEEEEEcCCC---------------cEEEEecC-CCCceEEEEEcCCCceEeecccCCcEEEEEc
Confidence 7999999999999999999997554 44788899 9999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
..+. ....+.+|++.|.++.|+.+ +.+|++++.|.+|++||+..
T Consensus 607 ~~~~----------~v~~l~~Ht~ti~SlsFS~d-g~vLasgg~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 607 ANGS----------LVKQLKGHTGTIYSLSFSRD-GNVLASGGADNSVRLWDLTK 650 (707)
T ss_pred CCCc----------chhhhhcccCceeEEEEecC-CCEEEecCCCCeEEEEEchh
Confidence 9887 56666789999999999999 99999999999999999864
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-24 Score=142.55 Aligned_cols=111 Identities=23% Similarity=0.463 Sum_probs=101.0
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|+++++++++.|++|+|||+. ....++.++.+ |...|++++|+|++..+++|+.|++|++||+
T Consensus 211 fs~d~~~l~s~s~D~tiriwd~~--------------~~~~~~~~l~g-H~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~ 275 (456)
T KOG0266|consen 211 FSPDGSYLLSGSDDKTLRIWDLK--------------DDGRNLKTLKG-HSTYVTSVAFSPDGNLLVSGSDDGTVRIWDV 275 (456)
T ss_pred ECCCCcEEEEecCCceEEEeecc--------------CCCeEEEEecC-CCCceEEEEecCCCCEEEEecCCCcEEEEec
Confidence 78999999999999999999972 22356888998 9999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.+. +...+.+|...|++++|+++ +++|++++.|+.|++||+.++.
T Consensus 276 ~~~~----------~~~~l~~hs~~is~~~f~~d-~~~l~s~s~d~~i~vwd~~~~~ 321 (456)
T KOG0266|consen 276 RTGE----------CVRKLKGHSDGISGLAFSPD-GNLLVSASYDGTIRVWDLETGS 321 (456)
T ss_pred cCCe----------EEEeeeccCCceEEEEECCC-CCEEEEcCCCccEEEEECCCCc
Confidence 9876 66667799999999999999 9999999999999999998875
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-24 Score=129.58 Aligned_cols=112 Identities=21% Similarity=0.386 Sum_probs=95.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
.+++|++.++++.|+++|+||+... ++...|.+ |...|.+++++++...+++|+.|.+|++|+.
T Consensus 71 ~s~dg~~alS~swD~~lrlWDl~~g---------------~~t~~f~G-H~~dVlsva~s~dn~qivSGSrDkTiklwnt 134 (315)
T KOG0279|consen 71 LSSDGNFALSASWDGTLRLWDLATG---------------ESTRRFVG-HTKDVLSVAFSTDNRQIVSGSRDKTIKLWNT 134 (315)
T ss_pred EccCCceEEeccccceEEEEEecCC---------------cEEEEEEe-cCCceEEEEecCCCceeecCCCcceeeeeee
Confidence 3789999999999999999998554 44778888 9999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecc-cccceeEEEEccCC-CCEEEEEeCCCcEEEEEcCCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRA-HNQDVNCVAWNPVV-PGMLASCSDDGDVKLWQIKLENL 138 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~-~~~l~~~~~d~~v~~wd~~~~~~ 138 (138)
.... ....... ++..|++++|+|++ ..++++++.|++|++||+++-++
T Consensus 135 ~g~c----------k~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l 184 (315)
T KOG0279|consen 135 LGVC----------KYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQL 184 (315)
T ss_pred cccE----------EEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcch
Confidence 8654 3333222 37899999999985 56899999999999999987653
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.3e-25 Score=146.54 Aligned_cols=111 Identities=24% Similarity=0.422 Sum_probs=102.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|.|-+|||||.|++-++|..... .+++.+.+ |...|.|+.|+|+..++++|+.|.++++||+
T Consensus 501 F~P~GyYFatas~D~tArLWs~d~~---------------~PlRifag-hlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv 564 (707)
T KOG0263|consen 501 FAPRGYYFATASHDQTARLWSTDHN---------------KPLRIFAG-HLSDVDCVSFHPNSNYVATGSSDRTVRLWDV 564 (707)
T ss_pred ecCCceEEEecCCCceeeeeecccC---------------Cchhhhcc-cccccceEEECCcccccccCCCCceEEEEEc
Confidence 7899999999999999999996543 45778888 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 138 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~ 138 (138)
..+. ..+.+.+|.++|.+++|+|+ +.+|++|+.|+.|.+||+.++++
T Consensus 565 ~~G~----------~VRiF~GH~~~V~al~~Sp~-Gr~LaSg~ed~~I~iWDl~~~~~ 611 (707)
T KOG0263|consen 565 STGN----------SVRIFTGHKGPVTALAFSPC-GRYLASGDEDGLIKIWDLANGSL 611 (707)
T ss_pred CCCc----------EEEEecCCCCceEEEEEcCC-CceEeecccCCcEEEEEcCCCcc
Confidence 9987 67788899999999999999 99999999999999999988653
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.5e-24 Score=139.49 Aligned_cols=117 Identities=17% Similarity=0.307 Sum_probs=96.9
Q ss_pred Ccc-CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCC-CeEEEeeCCCcEEEE
Q psy14817 1 MIQ-TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~-~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~-~~~~s~~~d~~i~i~ 78 (138)
|+| ++++|++|+.|++|++||+...... .....++..+.+ |...|.+++|+|++ .++++++.|++|++|
T Consensus 83 fsP~d~~~LaSgS~DgtIkIWdi~~~~~~--------~~~~~~l~~L~g-H~~~V~~l~f~P~~~~iLaSgs~DgtVrIW 153 (493)
T PTZ00421 83 FNPFDPQKLFTASEDGTIMGWGIPEEGLT--------QNISDPIVHLQG-HTKKVGIVSFHPSAMNVLASAGADMVVNVW 153 (493)
T ss_pred EcCCCCCEEEEEeCCCEEEEEecCCCccc--------cccCcceEEecC-CCCcEEEEEeCcCCCCEEEEEeCCCEEEEE
Confidence 678 7899999999999999998643211 111234667788 89999999999986 599999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|+..+. ....+..|...|.+++|+|+ +.+|++++.|+.|++||+++++
T Consensus 154 Dl~tg~----------~~~~l~~h~~~V~sla~spd-G~lLatgs~Dg~IrIwD~rsg~ 201 (493)
T PTZ00421 154 DVERGK----------AVEVIKCHSDQITSLEWNLD-GSLLCTTSKDKKLNIIDPRDGT 201 (493)
T ss_pred ECCCCe----------EEEEEcCCCCceEEEEEECC-CCEEEEecCCCEEEEEECCCCc
Confidence 998765 33444578899999999999 9999999999999999998764
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-24 Score=135.23 Aligned_cols=110 Identities=23% Similarity=0.341 Sum_probs=99.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|.|||.+++||+.|..-||||+++. +++-.+.+ |...|.+|.|+|.|..+++|+.|++++|||+
T Consensus 311 f~~DGSL~~tGGlD~~~RvWDlRtg---------------r~im~L~g-H~k~I~~V~fsPNGy~lATgs~Dnt~kVWDL 374 (459)
T KOG0272|consen 311 FQPDGSLAATGGLDSLGRVWDLRTG---------------RCIMFLAG-HIKEILSVAFSPNGYHLATGSSDNTCKVWDL 374 (459)
T ss_pred ecCCCceeeccCccchhheeecccC---------------cEEEEecc-cccceeeEeECCCceEEeecCCCCcEEEeee
Confidence 6899999999999999999998765 56888899 9999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+... ......+|.+-|+.++|+|..+.+|++++.|+++++|.-++-
T Consensus 375 R~r~----------~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~ 420 (459)
T KOG0272|consen 375 RMRS----------ELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTW 420 (459)
T ss_pred cccc----------cceecccccchhhheEecccCCeEEEEcccCcceeeecCCCc
Confidence 9776 345556899999999999976999999999999999987654
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=3e-23 Score=128.35 Aligned_cols=113 Identities=19% Similarity=0.436 Sum_probs=93.4
Q ss_pred Ccc-CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQ-TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~-~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
||| ....||+||.||+|+|||++..... .++. .+. |...|+.|.|+....+|++|+.||+++|||
T Consensus 265 WSptE~~vfaScS~DgsIrIWDiRs~~~~------------~~~~-~kA-h~sDVNVISWnr~~~lLasG~DdGt~~iwD 330 (440)
T KOG0302|consen 265 WSPTEDGVFASCSCDGSIRIWDIRSGPKK------------AAVS-TKA-HNSDVNVISWNRREPLLASGGDDGTLSIWD 330 (440)
T ss_pred cCCccCceEEeeecCceEEEEEecCCCcc------------ceeE-eec-cCCceeeEEccCCcceeeecCCCceEEEEE
Confidence 566 4568999999999999999876442 2233 355 899999999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
++.-+.. .+...++.|..+|+++.|+|.+...|++++.|.+|.+||+.
T Consensus 331 LR~~~~~-------~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDls 378 (440)
T KOG0302|consen 331 LRQFKSG-------QPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLS 378 (440)
T ss_pred hhhccCC-------CcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEee
Confidence 9975411 23445568999999999999878899999999999999985
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.1e-23 Score=136.98 Aligned_cols=118 Identities=20% Similarity=0.365 Sum_probs=98.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
+||||+++|||++||.|+|||.+.. -|+.+|.. |...|+.+.|+..+..+++++.||+|+.||+
T Consensus 358 YSpDgq~iaTG~eDgKVKvWn~~Sg---------------fC~vTFte-Hts~Vt~v~f~~~g~~llssSLDGtVRAwDl 421 (893)
T KOG0291|consen 358 YSPDGQLIATGAEDGKVKVWNTQSG---------------FCFVTFTE-HTSGVTAVQFTARGNVLLSSSLDGTVRAWDL 421 (893)
T ss_pred ECCCCcEEEeccCCCcEEEEeccCc---------------eEEEEecc-CCCceEEEEEEecCCEEEEeecCCeEEeeee
Confidence 5899999999999999999996433 67999998 9999999999999999999999999999999
Q ss_pred cCCC------------------CCCc------------eeeeee----eeeeecccccceeEEEEccCCCCEEEEEeCCC
Q psy14817 81 NPEA------------------GDSD------------MVSFDL----VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG 126 (138)
Q Consensus 81 ~~~~------------------~~~~------------~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 126 (138)
.... .+.. ...+.. ....+.+|+++|.+++|+|. ++.|+++++|.
T Consensus 422 kRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~-~~~LaS~SWDk 500 (893)
T KOG0291|consen 422 KRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPD-GSLLASGSWDK 500 (893)
T ss_pred cccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccc-cCeEEeccccc
Confidence 8764 0000 001111 23355789999999999999 99999999999
Q ss_pred cEEEEEcCC
Q psy14817 127 DVKLWQIKL 135 (138)
Q Consensus 127 ~v~~wd~~~ 135 (138)
+|++||+-.
T Consensus 501 TVRiW~if~ 509 (893)
T KOG0291|consen 501 TVRIWDIFS 509 (893)
T ss_pred eEEEEEeec
Confidence 999999744
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=5e-23 Score=122.95 Aligned_cols=110 Identities=21% Similarity=0.381 Sum_probs=95.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC-CccCeEEEEEecC--CCeEEEeeCCCcEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGRTIYDISWCHL--TDLIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~~~--~~~~~s~~~d~~i~i 77 (138)
|+||.+.+++||.|.+|++|+.-. .+..++... +.+.|.|++|+|. .+.|++++.|+++++
T Consensus 113 ~s~dn~qivSGSrDkTiklwnt~g----------------~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKv 176 (315)
T KOG0279|consen 113 FSTDNRQIVSGSRDKTIKLWNTLG----------------VCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKV 176 (315)
T ss_pred ecCCCceeecCCCcceeeeeeecc----------------cEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEE
Confidence 689999999999999999999643 334444442 2789999999998 569999999999999
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
||++..+ ....+.+|...++.+.++|| +..+++|+.||.+.+||++.++
T Consensus 177 Wnl~~~~----------l~~~~~gh~~~v~t~~vSpD-GslcasGgkdg~~~LwdL~~~k 225 (315)
T KOG0279|consen 177 WNLRNCQ----------LRTTFIGHSGYVNTVTVSPD-GSLCASGGKDGEAMLWDLNEGK 225 (315)
T ss_pred EccCCcc----------hhhccccccccEEEEEECCC-CCEEecCCCCceEEEEEccCCc
Confidence 9999876 55566689999999999999 9999999999999999999875
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=131.33 Aligned_cols=108 Identities=28% Similarity=0.517 Sum_probs=97.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|||+...|+|||+|++|+|||...+.. ...+.+ |.-.|.++.|+|...++++++.|..|++||.
T Consensus 188 fSpnDskF~t~SdDg~ikiWdf~~~ke---------------e~vL~G-HgwdVksvdWHP~kgLiasgskDnlVKlWDp 251 (464)
T KOG0284|consen 188 FSPNDSKFLTCSDDGTIKIWDFRMPKE---------------ERVLRG-HGWDVKSVDWHPTKGLIASGSKDNLVKLWDP 251 (464)
T ss_pred cCCCCceeEEecCCCeEEEEeccCCch---------------hheecc-CCCCcceeccCCccceeEEccCCceeEeecC
Confidence 789999999999999999999865544 244577 8899999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
+.++ +...+..|...|..+.|+|+ +++|++++.|..++++|+|+
T Consensus 252 rSg~----------cl~tlh~HKntVl~~~f~~n-~N~Llt~skD~~~kv~DiR~ 295 (464)
T KOG0284|consen 252 RSGS----------CLATLHGHKNTVLAVKFNPN-GNWLLTGSKDQSCKVFDIRT 295 (464)
T ss_pred CCcc----------hhhhhhhccceEEEEEEcCC-CCeeEEccCCceEEEEehhH
Confidence 9988 55556689999999999999 89999999999999999984
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=130.40 Aligned_cols=105 Identities=23% Similarity=0.529 Sum_probs=95.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
||||++++|++|-|.+|++|+-+.. +.+..|++ |-..|..++|+.|.+++++|+.|.++++|++
T Consensus 375 fSPd~r~IASaSFDkSVkLW~g~tG---------------k~lasfRG-Hv~~VYqvawsaDsRLlVS~SkDsTLKvw~V 438 (480)
T KOG0271|consen 375 FSPDGRYIASASFDKSVKLWDGRTG---------------KFLASFRG-HVAAVYQVAWSADSRLLVSGSKDSTLKVWDV 438 (480)
T ss_pred ECCCccEEEEeecccceeeeeCCCc---------------chhhhhhh-ccceeEEEEeccCccEEEEcCCCceEEEEEe
Confidence 7999999999999999999996544 55889999 9999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEE
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd 132 (138)
+..+ ....+.+|...|.++.|+|+ +..+++|+.|..+++|.
T Consensus 439 ~tkK----------l~~DLpGh~DEVf~vDwspD-G~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 439 RTKK----------LKQDLPGHADEVFAVDWSPD-GQRVASGGKDKVLRLWR 479 (480)
T ss_pred eeee----------ecccCCCCCceEEEEEecCC-CceeecCCCceEEEeec
Confidence 9866 44555689999999999999 99999999999999994
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-23 Score=138.85 Aligned_cols=124 Identities=27% Similarity=0.523 Sum_probs=97.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCC---------------------------C------------------ccCCC
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSA---------------------------G------------------IPTPD 35 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~---------------------------~------------------~~~~~ 35 (138)
||++|+|||+|++|+.|+||.+....... . .+...
T Consensus 275 FS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~s~~~~~p~~~ 354 (712)
T KOG0283|consen 275 FSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQSPCVLLPLKA 354 (712)
T ss_pred eCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccCCccccCCCcc
Confidence 79999999999999999999976511000 0 00000
Q ss_pred CCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCC
Q psy14817 36 NDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 115 (138)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 115 (138)
-.-..+|+..+.+ |.+.|..+.|+. ..+|++++.|.+|++|.+.... ++..+ .|...|+|++|+|.+
T Consensus 355 f~f~ekP~~ef~G-Ht~DILDlSWSK-n~fLLSSSMDKTVRLWh~~~~~----------CL~~F-~HndfVTcVaFnPvD 421 (712)
T KOG0283|consen 355 FVFSEKPFCEFKG-HTADILDLSWSK-NNFLLSSSMDKTVRLWHPGRKE----------CLKVF-SHNDFVTCVAFNPVD 421 (712)
T ss_pred ccccccchhhhhc-cchhheeccccc-CCeeEeccccccEEeecCCCcc----------eeeEE-ecCCeeEEEEecccC
Confidence 0112356777888 999999999985 5688899999999999998766 55555 799999999999987
Q ss_pred CCEEEEEeCCCcEEEEEcCCCC
Q psy14817 116 PGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 116 ~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.++|++|+-|+++|||++...+
T Consensus 422 DryFiSGSLD~KvRiWsI~d~~ 443 (712)
T KOG0283|consen 422 DRYFISGSLDGKVRLWSISDKK 443 (712)
T ss_pred CCcEeecccccceEEeecCcCe
Confidence 9999999999999999987654
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.6e-21 Score=128.92 Aligned_cols=117 Identities=17% Similarity=0.317 Sum_probs=91.5
Q ss_pred CccC-CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEE
Q psy14817 1 MIQT-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~-~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~ 78 (138)
|+|+ +++||||+.|++|+||++....... .....++..+.+ |...|.+++|+|++. .+++++.|++|++|
T Consensus 82 fsP~~~~lLASgS~DgtIrIWDi~t~~~~~-------~~i~~p~~~L~g-H~~~V~sVaf~P~g~~iLaSgS~DgtIrIW 153 (568)
T PTZ00420 82 FNPCFSEILASGSEDLTIRVWEIPHNDESV-------KEIKDPQCILKG-HKKKISIIDWNPMNYYIMCSSGFDSFVNIW 153 (568)
T ss_pred EcCCCCCEEEEEeCCCeEEEEECCCCCccc-------cccccceEEeec-CCCcEEEEEECCCCCeEEEEEeCCCeEEEE
Confidence 5786 7899999999999999986532110 000123456677 889999999999987 46789999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|++.+. ..... .+...|.+++|+|+ +.+|++++.|+.|++||+++++
T Consensus 154 Dl~tg~----------~~~~i-~~~~~V~Slswspd-G~lLat~s~D~~IrIwD~Rsg~ 200 (568)
T PTZ00420 154 DIENEK----------RAFQI-NMPKKLSSLKWNIK-GNLLSGTCVGKHMHIIDPRKQE 200 (568)
T ss_pred ECCCCc----------EEEEE-ecCCcEEEEEECCC-CCEEEEEecCCEEEEEECCCCc
Confidence 998765 22222 24568999999999 9999999999999999999875
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.3e-23 Score=128.64 Aligned_cols=110 Identities=25% Similarity=0.447 Sum_probs=96.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
||++|.++++|+.+|.|++|+..- ..++.++.+|...|++++|+|....|+++++|++|+|||.
T Consensus 146 ws~~g~wmiSgD~gG~iKyWqpnm----------------nnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf 209 (464)
T KOG0284|consen 146 WSHNGTWMISGDKGGMIKYWQPNM----------------NNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDF 209 (464)
T ss_pred EccCCCEEEEcCCCceEEecccch----------------hhhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEec
Confidence 688999999999999999999522 2356667756699999999998899999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.... ....+.+|...|.+++|+|. ...+++++.|..|++||.++++
T Consensus 210 ~~~k----------ee~vL~GHgwdVksvdWHP~-kgLiasgskDnlVKlWDprSg~ 255 (464)
T KOG0284|consen 210 RMPK----------EERVLRGHGWDVKSVDWHPT-KGLIASGSKDNLVKLWDPRSGS 255 (464)
T ss_pred cCCc----------hhheeccCCCCcceeccCCc-cceeEEccCCceeEeecCCCcc
Confidence 8765 44555799999999999999 9999999999999999999875
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.2e-21 Score=114.96 Aligned_cols=112 Identities=33% Similarity=0.603 Sum_probs=98.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|.|++||+||.|.++.||.-. ...++++..+.+ |...|.+++|+++|.+|+++++|.+|.||.+
T Consensus 69 wsp~g~~La~aSFD~t~~Iw~k~-------------~~efecv~~lEG-HEnEVK~Vaws~sG~~LATCSRDKSVWiWe~ 134 (312)
T KOG0645|consen 69 WSPHGRYLASASFDATVVIWKKE-------------DGEFECVATLEG-HENEVKCVAWSASGNYLATCSRDKSVWIWEI 134 (312)
T ss_pred ecCCCcEEEEeeccceEEEeecC-------------CCceeEEeeeec-cccceeEEEEcCCCCEEEEeeCCCeEEEEEe
Confidence 68999999999999999999952 456689999999 9999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
.... .+. +...+..|...|..+.|+|. ..+|++++.|.+|++|.-.
T Consensus 135 dedd------Efe-c~aVL~~HtqDVK~V~WHPt-~dlL~S~SYDnTIk~~~~~ 180 (312)
T KOG0645|consen 135 DEDD------EFE-CIAVLQEHTQDVKHVIWHPT-EDLLFSCSYDNTIKVYRDE 180 (312)
T ss_pred cCCC------cEE-EEeeeccccccccEEEEcCC-cceeEEeccCCeEEEEeec
Confidence 8443 122 34455689999999999999 9999999999999999754
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.8e-22 Score=125.90 Aligned_cols=111 Identities=34% Similarity=0.537 Sum_probs=97.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC---------eEEEeeC
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD---------LIATACG 71 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~---------~~~s~~~ 71 (138)
|.|.|.+|+|||+|++++||+.... .+...+.. |...|..+.|+|.++ .+++++.
T Consensus 367 ~n~tg~LLaS~SdD~TlkiWs~~~~---------------~~~~~l~~-Hskei~t~~wsp~g~v~~n~~~~~~l~sas~ 430 (524)
T KOG0273|consen 367 WNPTGSLLASCSDDGTLKIWSMGQS---------------NSVHDLQA-HSKEIYTIKWSPTGPVTSNPNMNLMLASASF 430 (524)
T ss_pred ECCCCceEEEecCCCeeEeeecCCC---------------cchhhhhh-hccceeeEeecCCCCccCCCcCCceEEEeec
Confidence 5788999999999999999996433 34677777 888999999999763 6899999
Q ss_pred CCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCCC
Q psy14817 72 DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 138 (138)
Q Consensus 72 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~ 138 (138)
|++|++||+..+. +...+..|+.+|.+++|+|+ +.++++|+.||.|.+|+++++++
T Consensus 431 dstV~lwdv~~gv----------~i~~f~kH~~pVysvafS~~-g~ylAsGs~dg~V~iws~~~~~l 486 (524)
T KOG0273|consen 431 DSTVKLWDVESGV----------PIHTLMKHQEPVYSVAFSPN-GRYLASGSLDGCVHIWSTKTGKL 486 (524)
T ss_pred CCeEEEEEccCCc----------eeEeeccCCCceEEEEecCC-CcEEEecCCCCeeEeccccchhe
Confidence 9999999999887 55556689999999999999 99999999999999999998764
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=117.52 Aligned_cols=107 Identities=18% Similarity=0.334 Sum_probs=96.8
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec-CCCeEEEeeCCCcEEEEeccC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATACGDDAIRIFKENP 82 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~s~~~d~~i~i~~~~~ 82 (138)
+...|+|+|.|.++.+||++.. +.+..|.+ |.+.|.++.++| +++.|++|+-|...++||++.
T Consensus 155 dD~~ilT~SGD~TCalWDie~g---------------~~~~~f~G-H~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~ 218 (343)
T KOG0286|consen 155 DDNHILTGSGDMTCALWDIETG---------------QQTQVFHG-HTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRS 218 (343)
T ss_pred CCCceEecCCCceEEEEEcccc---------------eEEEEecC-CcccEEEEecCCCCCCeEEecccccceeeeeccC
Confidence 4678999999999999997655 44788899 999999999999 888999999999999999998
Q ss_pred CCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 83 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+. ....+.+|...|+.++|.|+ +.-+++|+.|++.++||+|..+
T Consensus 219 ~~----------c~qtF~ghesDINsv~ffP~-G~afatGSDD~tcRlyDlRaD~ 262 (343)
T KOG0286|consen 219 GQ----------CVQTFEGHESDINSVRFFPS-GDAFATGSDDATCRLYDLRADQ 262 (343)
T ss_pred cc----------eeEeecccccccceEEEccC-CCeeeecCCCceeEEEeecCCc
Confidence 87 66667799999999999999 9999999999999999999753
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.1e-21 Score=127.96 Aligned_cols=113 Identities=27% Similarity=0.479 Sum_probs=96.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
||++|+.+++++.|+.+++|+...... .....+.+ |...|..++|+|++.++++++.|++|++||+
T Consensus 167 fs~~g~~l~~~~~~~~i~~~~~~~~~~-------------~~~~~l~~-h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~ 232 (456)
T KOG0266|consen 167 FSPDGRALAAASSDGLIRIWKLEGIKS-------------NLLRELSG-HTRGVSDVAFSPDGSYLLSGSDDKTLRIWDL 232 (456)
T ss_pred EcCCCCeEEEccCCCcEEEeecccccc-------------hhhccccc-cccceeeeEECCCCcEEEEecCCceEEEeec
Confidence 689999999999999999999733220 12455566 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.... .....+.+|...|++++|+|. ++.+++|+.|++|++||+++++
T Consensus 233 ~~~~---------~~~~~l~gH~~~v~~~~f~p~-g~~i~Sgs~D~tvriWd~~~~~ 279 (456)
T KOG0266|consen 233 KDDG---------RNLKTLKGHSTYVTSVAFSPD-GNLLVSGSDDGTVRIWDVRTGE 279 (456)
T ss_pred cCCC---------eEEEEecCCCCceEEEEecCC-CCEEEEecCCCcEEEEeccCCe
Confidence 4432 145566799999999999999 7999999999999999999864
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=117.77 Aligned_cols=111 Identities=23% Similarity=0.393 Sum_probs=94.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|+|.+||||+.|..|.+|+...... -...+++ |.++|..+.|.+++..+++++.|.+++.||.
T Consensus 55 F~P~gs~~aSgG~Dr~I~LWnv~gdce--------------N~~~lkg-HsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~ 119 (338)
T KOG0265|consen 55 FHPDGSCFASGGSDRAIVLWNVYGDCE--------------NFWVLKG-HSGAVMELHGMRDGSHILSCGTDKTVRGWDA 119 (338)
T ss_pred ECCCCCeEeecCCcceEEEEecccccc--------------ceeeecc-ccceeEeeeeccCCCEEEEecCCceEEEEec
Confidence 789999999999999999999654322 1345567 9999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+.++ ..+..+.|...|+.+.-+.-+..++.+++.|+++++||+|.+
T Consensus 120 ~tG~----------~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k 165 (338)
T KOG0265|consen 120 ETGK----------RIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKK 165 (338)
T ss_pred ccce----------eeehhccccceeeecCccccCCeEEEecCCCceEEEEeeccc
Confidence 9987 556667899999988744444668899999999999999954
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=114.65 Aligned_cols=110 Identities=29% Similarity=0.474 Sum_probs=99.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+-+|+|.+||+.|++|++|+.. ...+++++.+ |...|..++.+.+...|++|+.|..+.+||+
T Consensus 25 yN~dGnY~ltcGsdrtvrLWNp~---------------rg~liktYsg-hG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV 88 (307)
T KOG0316|consen 25 YNVDGNYCLTCGSDRTVRLWNPL---------------RGALIKTYSG-HGHEVLDAALSSDNSKFASCGGDKAVQVWDV 88 (307)
T ss_pred EccCCCEEEEcCCCceEEeeccc---------------ccceeeeecC-CCceeeeccccccccccccCCCCceEEEEEc
Confidence 45689999999999999999953 3366899999 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..++ ..+.+.+|...|+.++|+.+ ...+++|+.|.++++||.|+..
T Consensus 89 ~TGk----------v~Rr~rgH~aqVNtV~fNee-sSVv~SgsfD~s~r~wDCRS~s 134 (307)
T KOG0316|consen 89 NTGK----------VDRRFRGHLAQVNTVRFNEE-SSVVASGSFDSSVRLWDCRSRS 134 (307)
T ss_pred ccCe----------eeeecccccceeeEEEecCc-ceEEEeccccceeEEEEcccCC
Confidence 9998 67777899999999999998 9999999999999999998754
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-21 Score=117.30 Aligned_cols=115 Identities=22% Similarity=0.383 Sum_probs=95.7
Q ss_pred Ccc-CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQ-TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~-~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
++| +++.|++|+.|++.++||++.. .+.++|.+ |...|++|+|.|+|.-|++|++|+++++||
T Consensus 194 l~p~~~ntFvSg~cD~~aklWD~R~~---------------~c~qtF~g-hesDINsv~ffP~G~afatGSDD~tcRlyD 257 (343)
T KOG0286|consen 194 LSPSDGNTFVSGGCDKSAKLWDVRSG---------------QCVQTFEG-HESDINSVRFFPSGDAFATGSDDATCRLYD 257 (343)
T ss_pred cCCCCCCeEEecccccceeeeeccCc---------------ceeEeecc-cccccceEEEccCCCeeeecCCCceeEEEe
Confidence 467 8999999999999999998765 55899999 999999999999999999999999999999
Q ss_pred ccCCCCC-------------------Cc-----------eeeeee----eeeeecccccceeEEEEccCCCCEEEEEeCC
Q psy14817 80 ENPEAGD-------------------SD-----------MVSFDL----VHTEHRAHNQDVNCVAWNPVVPGMLASCSDD 125 (138)
Q Consensus 80 ~~~~~~~-------------------~~-----------~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 125 (138)
++..... +. -..+.. ....+.+|.++|+++..+|+ +.-+++|+.|
T Consensus 258 lRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~D-G~av~TgSWD 336 (343)
T KOG0286|consen 258 LRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPD-GMAVATGSWD 336 (343)
T ss_pred ecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCC-CcEEEecchh
Confidence 9986410 00 001111 22344689999999999999 9999999999
Q ss_pred CcEEEEE
Q psy14817 126 GDVKLWQ 132 (138)
Q Consensus 126 ~~v~~wd 132 (138)
.+++||.
T Consensus 337 s~lriW~ 343 (343)
T KOG0286|consen 337 STLRIWA 343 (343)
T ss_pred HheeecC
Confidence 9999994
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.9e-21 Score=116.15 Aligned_cols=112 Identities=22% Similarity=0.353 Sum_probs=90.4
Q ss_pred Ccc-CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQ-TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~-~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
||| ...+++++|.|++||+|+++......+ +.... |.++|.+++|+.+|..+++|+.|+.+++||
T Consensus 35 FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~-------------ka~~~-~~~PvL~v~WsddgskVf~g~~Dk~~k~wD 100 (347)
T KOG0647|consen 35 FSPQADNLLAAGSWDGTVRIWEVQNSGQLVP-------------KAQQS-HDGPVLDVCWSDDGSKVFSGGCDKQAKLWD 100 (347)
T ss_pred eccccCceEEecccCCceEEEEEecCCcccc-------------hhhhc-cCCCeEEEEEccCCceEEeeccCCceEEEE
Confidence 788 556777999999999999876433211 12233 788999999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccC-CCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV-VPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+..++ .... ..|..+|..+.|-+. ....|++|+.|.+|++||.|+..
T Consensus 101 L~S~Q----------~~~v-~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~ 148 (347)
T KOG0647|consen 101 LASGQ----------VSQV-AAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSN 148 (347)
T ss_pred ccCCC----------eeee-eecccceeEEEEecCCCcceeEecccccceeecccCCCC
Confidence 99886 3333 479999999999765 13489999999999999999764
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.6e-21 Score=127.36 Aligned_cols=110 Identities=28% Similarity=0.432 Sum_probs=100.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
++|+..+|||||.|.+.+||++. +.+.+.++.+ |+..|.+|.|++..+.+++++.|.+|+||.+
T Consensus 471 ia~ndkLiAT~SqDktaKiW~le---------------~~~l~~vLsG-H~RGvw~V~Fs~~dq~laT~SgD~TvKIW~i 534 (775)
T KOG0319|consen 471 IAPNDKLIATGSQDKTAKIWDLE---------------QLRLLGVLSG-HTRGVWCVSFSKNDQLLATCSGDKTVKIWSI 534 (775)
T ss_pred ecCCCceEEecccccceeeeccc---------------CceEEEEeeC-CccceEEEEeccccceeEeccCCceEEEEEe
Confidence 47899999999999999999974 3366889999 9999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
...+ +...+.+|+..|....|-.+ +..|++++.||.+++|++++++
T Consensus 535 s~fS----------ClkT~eGH~~aVlra~F~~~-~~qliS~~adGliKlWnikt~e 580 (775)
T KOG0319|consen 535 STFS----------CLKTFEGHTSAVLRASFIRN-GKQLISAGADGLIKLWNIKTNE 580 (775)
T ss_pred ccce----------eeeeecCccceeEeeeeeeC-CcEEEeccCCCcEEEEeccchh
Confidence 9877 66667799999999999988 9999999999999999998864
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=2e-20 Score=111.64 Aligned_cols=114 Identities=30% Similarity=0.635 Sum_probs=96.4
Q ss_pred CccC-CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQT-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~-~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|- |..||||+.|+.||+|+... ...+.|...+...|+..|..++|+|.|+++++++.|.++.||.
T Consensus 22 whp~~g~ilAscg~Dk~vriw~~~~------------~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~ 89 (312)
T KOG0645|consen 22 WHPGKGVILASCGTDKAVRIWSTSS------------GDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWK 89 (312)
T ss_pred eccCCceEEEeecCCceEEEEecCC------------CCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEee
Confidence 4665 78999999999999999642 2347777777777999999999999999999999999999997
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
-..+. +.+ ...+.+|...|.+++|+++ +++|++++.|.+|-||.+..
T Consensus 90 k~~~e-------fec-v~~lEGHEnEVK~Vaws~s-G~~LATCSRDKSVWiWe~de 136 (312)
T KOG0645|consen 90 KEDGE-------FEC-VATLEGHENEVKCVAWSAS-GNYLATCSRDKSVWIWEIDE 136 (312)
T ss_pred cCCCc-------eeE-EeeeeccccceeEEEEcCC-CCEEEEeeCCCeEEEEEecC
Confidence 66443 222 3445699999999999999 99999999999999998763
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.6e-22 Score=122.94 Aligned_cols=126 Identities=22% Similarity=0.344 Sum_probs=97.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCcc------------------------------CCCCCCce-----EEeEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIP------------------------------TPDNDSVW-----KCVCT 45 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~------------------------------~~~~~~~~-----~~~~~ 45 (138)
|||||++|++||.||.|.+|++.......... ..+....| .|+..
T Consensus 221 FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRr 300 (508)
T KOG0275|consen 221 FSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRR 300 (508)
T ss_pred eCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHH
Confidence 79999999999999999999975543222110 01122222 34455
Q ss_pred ecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC
Q psy14817 46 LSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD 125 (138)
Q Consensus 46 ~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 125 (138)
|...|...|+|+.|+.++..+++++.|.++++..+..+. ....+++|...|+...|.++ +..+++++.|
T Consensus 301 FdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK----------~LKEfrGHsSyvn~a~ft~d-G~~iisaSsD 369 (508)
T KOG0275|consen 301 FDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGK----------CLKEFRGHSSYVNEATFTDD-GHHIISASSD 369 (508)
T ss_pred hhhhhccCeeEEEEccCcchhhcccccceEEEeccccch----------hHHHhcCccccccceEEcCC-CCeEEEecCC
Confidence 554477888888888888888888888888888888776 66677899999999999999 9999999999
Q ss_pred CcEEEEEcCCCC
Q psy14817 126 GDVKLWQIKLEN 137 (138)
Q Consensus 126 ~~v~~wd~~~~~ 137 (138)
|+|++|+.++.+
T Consensus 370 gtvkvW~~Ktte 381 (508)
T KOG0275|consen 370 GTVKVWHGKTTE 381 (508)
T ss_pred ccEEEecCcchh
Confidence 999999988754
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.8e-21 Score=119.32 Aligned_cols=109 Identities=22% Similarity=0.356 Sum_probs=98.2
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
-|..++|+||+.|++++|||+... +...++.+ |...|..+++++.-+++++++.|+.|+.||+.
T Consensus 160 dP~n~wf~tgs~DrtikIwDlatg---------------~LkltltG-hi~~vr~vavS~rHpYlFs~gedk~VKCwDLe 223 (460)
T KOG0285|consen 160 DPGNEWFATGSADRTIKIWDLATG---------------QLKLTLTG-HIETVRGVAVSKRHPYLFSAGEDKQVKCWDLE 223 (460)
T ss_pred CCCceeEEecCCCceeEEEEcccC---------------eEEEeecc-hhheeeeeeecccCceEEEecCCCeeEEEech
Confidence 467889999999999999997543 55678888 89999999999999999999999999999999
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..+ ..+...+|-..|.+++.+|. -+.|++++.|.++++||+|+..
T Consensus 224 ~nk----------vIR~YhGHlS~V~~L~lhPT-ldvl~t~grDst~RvWDiRtr~ 268 (460)
T KOG0285|consen 224 YNK----------VIRHYHGHLSGVYCLDLHPT-LDVLVTGGRDSTIRVWDIRTRA 268 (460)
T ss_pred hhh----------hHHHhccccceeEEEecccc-ceeEEecCCcceEEEeeecccc
Confidence 876 66677799999999999999 9999999999999999999763
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-21 Score=124.39 Aligned_cols=109 Identities=20% Similarity=0.426 Sum_probs=95.6
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
.+.+|++++.|+.|+||++.. ..+++.++.+ |..+|..++|+.+|..|++++.|+.+++||.+.+
T Consensus 226 ~~hLlLS~gmD~~vklW~vy~--------------~~~~lrtf~g-H~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG 290 (503)
T KOG0282|consen 226 KGHLLLSGGMDGLVKLWNVYD--------------DRRCLRTFKG-HRKPVRDASFNNCGTSFLSASFDRFLKLWDTETG 290 (503)
T ss_pred eeeEEEecCCCceEEEEEEec--------------Ccceehhhhc-chhhhhhhhccccCCeeeeeecceeeeeeccccc
Confidence 789999999999999999865 2367999999 9999999999999999999999999999999998
Q ss_pred CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCCC
Q psy14817 84 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 138 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~ 138 (138)
. +...+ .....++++.|+|++.+.+++|+.|+.|+.||+|++++
T Consensus 291 ~----------~~~~f-~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kv 334 (503)
T KOG0282|consen 291 Q----------VLSRF-HLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKV 334 (503)
T ss_pred e----------EEEEE-ecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHH
Confidence 7 33322 34567889999999668999999999999999998763
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.2e-21 Score=119.67 Aligned_cols=109 Identities=18% Similarity=0.382 Sum_probs=91.8
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEeccC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENP 82 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~ 82 (138)
+..+|+++++|+.+.|||+|.. .. ++...... |.+.|+|++|+|.+. .|++|+.|++|.+||++.
T Consensus 239 h~~lF~sv~dd~~L~iwD~R~~-~~------------~~~~~~~a-h~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRn 304 (422)
T KOG0264|consen 239 HEDLFGSVGDDGKLMIWDTRSN-TS------------KPSHSVKA-HSAEVNCVAFNPFNEFILATGSADKTVALWDLRN 304 (422)
T ss_pred chhhheeecCCCeEEEEEcCCC-CC------------CCcccccc-cCCceeEEEeCCCCCceEEeccCCCcEEEeechh
Confidence 3468999999999999999863 11 22445556 899999999999876 889999999999999997
Q ss_pred CCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 83 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
.. .....+..|...|..+.|+|....+|++++.|+.+.+||+..
T Consensus 305 L~---------~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ 348 (422)
T KOG0264|consen 305 LN---------KPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSR 348 (422)
T ss_pred cc---------cCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccc
Confidence 66 245566789999999999999788999999999999999853
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.6e-21 Score=118.39 Aligned_cols=110 Identities=22% Similarity=0.352 Sum_probs=97.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
||+...|++++++|+.|+-||+... +.+..+.+ |-..|.|++.+|.-..+++|+.|.++++||+
T Consensus 201 vS~rHpYlFs~gedk~VKCwDLe~n---------------kvIR~YhG-HlS~V~~L~lhPTldvl~t~grDst~RvWDi 264 (460)
T KOG0285|consen 201 VSKRHPYLFSAGEDKQVKCWDLEYN---------------KVIRHYHG-HLSGVYCLDLHPTLDVLVTGGRDSTIRVWDI 264 (460)
T ss_pred ecccCceEEEecCCCeeEEEechhh---------------hhHHHhcc-ccceeEEEeccccceeEEecCCcceEEEeee
Confidence 4677789999999999999998544 44777888 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+... ....+.+|..+|..+.+.|. ...+++|+.|++|++||++.++
T Consensus 265 Rtr~----------~V~~l~GH~~~V~~V~~~~~-dpqvit~S~D~tvrlWDl~agk 310 (460)
T KOG0285|consen 265 RTRA----------SVHVLSGHTNPVASVMCQPT-DPQVITGSHDSTVRLWDLRAGK 310 (460)
T ss_pred cccc----------eEEEecCCCCcceeEEeecC-CCceEEecCCceEEEeeeccCc
Confidence 9865 45556799999999999998 7889999999999999998775
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.1e-21 Score=112.11 Aligned_cols=108 Identities=19% Similarity=0.344 Sum_probs=94.0
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
.|+++.||+++. ..||+||++.... .++.++.+ |...|+.|.|..+|+++++|++||+++|||++
T Consensus 49 Tpdk~~LAaa~~-qhvRlyD~~S~np-------------~Pv~t~e~-h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR 113 (311)
T KOG0315|consen 49 TPDKKDLAAAGN-QHVRLYDLNSNNP-------------NPVATFEG-HTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLR 113 (311)
T ss_pred cCCcchhhhccC-CeeEEEEccCCCC-------------CceeEEec-cCCceEEEEEeecCeEEEecCCCceEEEEecc
Confidence 578888998864 8999999876543 46889999 89999999999999999999999999999999
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
... +.+.+ .+..+|+++..+|+ ...|+++..+|.|++||++..
T Consensus 114 ~~~----------~qR~~-~~~spVn~vvlhpn-QteLis~dqsg~irvWDl~~~ 156 (311)
T KOG0315|consen 114 SLS----------CQRNY-QHNSPVNTVVLHPN-QTELISGDQSGNIRVWDLGEN 156 (311)
T ss_pred Ccc----------cchhc-cCCCCcceEEecCC-cceEEeecCCCcEEEEEccCC
Confidence 754 44443 67799999999999 899999999999999999865
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.9e-21 Score=125.72 Aligned_cols=109 Identities=23% Similarity=0.391 Sum_probs=95.8
Q ss_pred Ccc-CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCC--CeEEEeeCCCcEEE
Q psy14817 1 MIQ-TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT--DLIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~-~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~s~~~d~~i~i 77 (138)
|+| |.+.||++|-|++|+||.+..+.. ..++.+ |...|+||.+-+.| +++++|++|.+++|
T Consensus 148 fnPkD~ntFaS~sLDrTVKVWslgs~~~---------------nfTl~g-HekGVN~Vdyy~~gdkpylIsgaDD~tiKv 211 (794)
T KOG0276|consen 148 FNPKDPNTFASASLDRTVKVWSLGSPHP---------------NFTLEG-HEKGVNCVDYYTGGDKPYLISGADDLTIKV 211 (794)
T ss_pred ecCCCccceeeeeccccEEEEEcCCCCC---------------ceeeec-cccCcceEEeccCCCcceEEecCCCceEEE
Confidence 345 668999999999999999866533 688888 89999999998866 59999999999999
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
||..... +...+.+|...|+.+.|+|. -.++++|+.||++++|+-.+-
T Consensus 212 WDyQtk~----------CV~TLeGHt~Nvs~v~fhp~-lpiiisgsEDGTvriWhs~Ty 259 (794)
T KOG0276|consen 212 WDYQTKS----------CVQTLEGHTNNVSFVFFHPE-LPIIISGSEDGTVRIWNSKTY 259 (794)
T ss_pred eecchHH----------HHHHhhcccccceEEEecCC-CcEEEEecCCccEEEecCcce
Confidence 9999876 66667799999999999999 999999999999999987654
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=9e-21 Score=128.19 Aligned_cols=108 Identities=26% Similarity=0.443 Sum_probs=99.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++.+|++|++|-.|+||++. ..+|+.++.+ |-.-|..+.|++..++|+++++|.+|+||+-
T Consensus 59 FH~~qplFVSGGDDykIkVWnYk---------------~rrclftL~G-HlDYVRt~~FHheyPWIlSASDDQTIrIWNw 122 (1202)
T KOG0292|consen 59 FHPTQPLFVSGGDDYKIKVWNYK---------------TRRCLFTLLG-HLDYVRTVFFHHEYPWILSASDDQTIRIWNW 122 (1202)
T ss_pred ecCCCCeEEecCCccEEEEEecc---------------cceehhhhcc-ccceeEEeeccCCCceEEEccCCCeEEEEec
Confidence 78999999999999999999963 3478999999 9999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
.... +...+.+|...|.|.+|+|. .+.++++|-|.+||+||+..
T Consensus 123 qsr~----------~iavltGHnHYVMcAqFhpt-EDlIVSaSLDQTVRVWDisG 166 (1202)
T KOG0292|consen 123 QSRK----------CIAVLTGHNHYVMCAQFHPT-EDLIVSASLDQTVRVWDISG 166 (1202)
T ss_pred cCCc----------eEEEEecCceEEEeeccCCc-cceEEEecccceEEEEeecc
Confidence 9877 56667799999999999999 99999999999999999854
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-20 Score=115.95 Aligned_cols=109 Identities=25% Similarity=0.506 Sum_probs=93.2
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC---------------CCeE
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL---------------TDLI 66 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~---------------~~~~ 66 (138)
+.||.++|+|+.|.+|++|-+... .|...++. |..+|-+++|.|. ++++
T Consensus 244 ~~DGti~As~s~dqtl~vW~~~t~---------------~~k~~lR~-hEh~vEci~wap~~~~~~i~~at~~~~~~~~l 307 (406)
T KOG0295|consen 244 NQDGTIIASCSNDQTLRVWVVATK---------------QCKAELRE-HEHPVECIAWAPESSYPSISEATGSTNGGQVL 307 (406)
T ss_pred cCCeeEEEecCCCceEEEEEeccc---------------hhhhhhhc-cccceEEEEecccccCcchhhccCCCCCccEE
Confidence 468999999999999999996543 34556666 7888889988874 2489
Q ss_pred EEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 67 ATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 67 ~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.+++.|++|++||+..+. +.-.+.+|...|..++|+|. +++|+++..|+++++||+++++
T Consensus 308 ~s~SrDktIk~wdv~tg~----------cL~tL~ghdnwVr~~af~p~-Gkyi~ScaDDktlrvwdl~~~~ 367 (406)
T KOG0295|consen 308 GSGSRDKTIKIWDVSTGM----------CLFTLVGHDNWVRGVAFSPG-GKYILSCADDKTLRVWDLKNLQ 367 (406)
T ss_pred EeecccceEEEEeccCCe----------EEEEEecccceeeeeEEcCC-CeEEEEEecCCcEEEEEeccce
Confidence 999999999999999886 45555699999999999999 9999999999999999998765
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.1e-20 Score=117.16 Aligned_cols=119 Identities=24% Similarity=0.340 Sum_probs=95.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEec---CCCccCeEEEEEecCCCeEEEeeCCCcEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS---GHHGRTIYDISWCHLTDLIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i 77 (138)
|||||.+|||++.||.+.+||-.. .+.+..+. . |++.|.++.|+||+..+++++.|.+++|
T Consensus 198 ysPDG~~Fat~gsDgki~iyDGkt---------------ge~vg~l~~~~a-HkGsIfalsWsPDs~~~~T~SaDkt~KI 261 (603)
T KOG0318|consen 198 YSPDGSRFATAGSDGKIYIYDGKT---------------GEKVGELEDSDA-HKGSIFALSWSPDSTQFLTVSADKTIKI 261 (603)
T ss_pred ECCCCCeEEEecCCccEEEEcCCC---------------ccEEEEecCCCC-ccccEEEEEECCCCceEEEecCCceEEE
Confidence 699999999999999999999433 23355555 5 8999999999999999999999999999
Q ss_pred EeccCCCCCC---------ceee---e---------------------eeeeeeecccccceeEEEEccCCCCEEEEEeC
Q psy14817 78 FKENPEAGDS---------DMVS---F---------------------DLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124 (138)
Q Consensus 78 ~~~~~~~~~~---------~~~~---~---------------------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 124 (138)
||+...+... ++.. + ..+.....+|...|+++..+|+ +.+|++|+.
T Consensus 262 WdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d-~~~i~Sgsy 340 (603)
T KOG0318|consen 262 WDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPD-GKTIYSGSY 340 (603)
T ss_pred EEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCC-CCEEEeecc
Confidence 9998775110 0000 0 0023344689999999999999 899999999
Q ss_pred CCcEEEEEcCCC
Q psy14817 125 DGDVKLWQIKLE 136 (138)
Q Consensus 125 d~~v~~wd~~~~ 136 (138)
||.|.-|++..+
T Consensus 341 DG~I~~W~~~~g 352 (603)
T KOG0318|consen 341 DGHINSWDSGSG 352 (603)
T ss_pred CceEEEEecCCc
Confidence 999999998765
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.1e-20 Score=108.14 Aligned_cols=116 Identities=18% Similarity=0.274 Sum_probs=99.6
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
.|+|..++.+..-|.+.+|++..... ....+++..++. |.+.+..+.++|++++|++++.|.+++||+.+
T Consensus 176 ~~dgsml~a~nnkG~cyvW~l~~~~~---------~s~l~P~~k~~a-h~~~il~C~lSPd~k~lat~ssdktv~iwn~~ 245 (311)
T KOG0315|consen 176 MPDGSMLAAANNKGNCYVWRLLNHQT---------ASELEPVHKFQA-HNGHILRCLLSPDVKYLATCSSDKTVKIWNTD 245 (311)
T ss_pred cCCCcEEEEecCCccEEEEEccCCCc---------cccceEhhheec-ccceEEEEEECCCCcEEEeecCCceEEEEecC
Confidence 58999999999999999999866333 334467778888 89999999999999999999999999999988
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..- .......+|...++..+|+.+ +.+|++++.|+.+++|++..++
T Consensus 246 ~~~---------kle~~l~gh~rWvWdc~FS~d-g~YlvTassd~~~rlW~~~~~k 291 (311)
T KOG0315|consen 246 DFF---------KLELVLTGHQRWVWDCAFSAD-GEYLVTASSDHTARLWDLSAGK 291 (311)
T ss_pred Cce---------eeEEEeecCCceEEeeeeccC-ccEEEecCCCCceeecccccCc
Confidence 641 134445688999999999999 9999999999999999998765
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.1e-20 Score=116.85 Aligned_cols=118 Identities=28% Similarity=0.528 Sum_probs=93.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+.+|.+||+|++||.+++|+... ..+.++.. |+++|.++.|+..|.+|++++-|+++.+||.
T Consensus 243 Wn~~G~~LatG~~~G~~riw~~~G----------------~l~~tl~~-HkgPI~slKWnk~G~yilS~~vD~ttilwd~ 305 (524)
T KOG0273|consen 243 WNNDGTLLATGSEDGEARIWNKDG----------------NLISTLGQ-HKGPIFSLKWNKKGTYILSGGVDGTTILWDA 305 (524)
T ss_pred ecCCCCeEEEeecCcEEEEEecCc----------------hhhhhhhc-cCCceEEEEEcCCCCEEEeccCCccEEEEec
Confidence 577899999999999999999643 22556666 9999999999999999999999999999999
Q ss_pred cCCCCCC-------------------------c--eeee----eeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEE
Q psy14817 81 NPEAGDS-------------------------D--MVSF----DLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 129 (138)
Q Consensus 81 ~~~~~~~-------------------------~--~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~ 129 (138)
..+.... + .... +.+...+.+|.+.|.++.|+|. +.+|++++.|++++
T Consensus 306 ~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~t-g~LLaS~SdD~Tlk 384 (524)
T KOG0273|consen 306 HTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPT-GSLLASCSDDGTLK 384 (524)
T ss_pred cCceEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCC-CceEEEecCCCeeE
Confidence 7654100 0 0000 0122334579999999999999 99999999999999
Q ss_pred EEEcCCC
Q psy14817 130 LWQIKLE 136 (138)
Q Consensus 130 ~wd~~~~ 136 (138)
+|.....
T Consensus 385 iWs~~~~ 391 (524)
T KOG0273|consen 385 IWSMGQS 391 (524)
T ss_pred eeecCCC
Confidence 9997543
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-20 Score=125.58 Aligned_cols=108 Identities=22% Similarity=0.356 Sum_probs=91.2
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEeccC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENP 82 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~ 82 (138)
..++|++||.||+|++||++.... ..++.+ ....|..|.|+|... .|+++.+.|.+++||++.
T Consensus 145 ep~iliSGSQDg~vK~~DlR~~~S---------------~~t~~~-nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRq 208 (839)
T KOG0269|consen 145 EPNILISGSQDGTVKCWDLRSKKS---------------KSTFRS-NSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQ 208 (839)
T ss_pred CccEEEecCCCceEEEEeeecccc---------------cccccc-cchhhhceeeccCCCceEEEecCCceEEEeeccC
Confidence 457999999999999999987654 445555 567899999999776 899999999999999996
Q ss_pred CCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 83 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.. .....+.+|.++|.++.|+|+ ..+|++|+.|+.|+|||..+.+
T Consensus 209 p~---------r~~~k~~AH~GpV~c~nwhPn-r~~lATGGRDK~vkiWd~t~~~ 253 (839)
T KOG0269|consen 209 PD---------RCEKKLTAHNGPVLCLNWHPN-REWLATGGRDKMVKIWDMTDSR 253 (839)
T ss_pred ch---------hHHHHhhcccCceEEEeecCC-CceeeecCCCccEEEEeccCCC
Confidence 54 234455689999999999998 9999999999999999987543
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.8e-20 Score=125.97 Aligned_cols=122 Identities=30% Similarity=0.529 Sum_probs=104.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCc---cCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGI---PTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i 77 (138)
|||||++||+||+|+.|.||........... ....+...|+++..+.+ |...|..+.|+|++.++++++.|++|.+
T Consensus 77 ~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~-H~~DV~Dv~Wsp~~~~lvS~s~DnsVii 155 (942)
T KOG0973|consen 77 FSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRG-HDSDVLDVNWSPDDSLLVSVSLDNSVII 155 (942)
T ss_pred ECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEec-CCCccceeccCCCccEEEEecccceEEE
Confidence 7999999999999999999997641111111 12234678999999999 9999999999999999999999999999
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
|+..... ....+.+|...|..+.|.|- +++|++-+.|++|++|+..
T Consensus 156 wn~~tF~----------~~~vl~~H~s~VKGvs~DP~-Gky~ASqsdDrtikvwrt~ 201 (942)
T KOG0973|consen 156 WNAKTFE----------LLKVLRGHQSLVKGVSWDPI-GKYFASQSDDRTLKVWRTS 201 (942)
T ss_pred Eccccce----------eeeeeecccccccceEECCc-cCeeeeecCCceEEEEEcc
Confidence 9988765 56667799999999999999 9999999999999999853
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.6e-20 Score=112.69 Aligned_cols=103 Identities=23% Similarity=0.408 Sum_probs=93.2
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
++++++++.|++|++||+.. ..|+.++.+ |...|..++|+|.|++|+++.+|+++++||+....
T Consensus 304 ~~~l~s~SrDktIk~wdv~t---------------g~cL~tL~g-hdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~ 367 (406)
T KOG0295|consen 304 GQVLGSGSRDKTIKIWDVST---------------GMCLFTLVG-HDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQ 367 (406)
T ss_pred ccEEEeecccceEEEEeccC---------------CeEEEEEec-ccceeeeeEEcCCCeEEEEEecCCcEEEEEeccce
Confidence 57999999999999999644 378999999 99999999999999999999999999999999887
Q ss_pred CCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 85 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
+......|..-+++++|+.+ ..++++|+-|.++++|..|
T Consensus 368 ----------cmk~~~ah~hfvt~lDfh~~-~p~VvTGsVdqt~KvwEcr 406 (406)
T KOG0295|consen 368 ----------CMKTLEAHEHFVTSLDFHKT-APYVVTGSVDQTVKVWECR 406 (406)
T ss_pred ----------eeeccCCCcceeEEEecCCC-CceEEeccccceeeeeecC
Confidence 55555689999999999998 8899999999999999764
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.6e-20 Score=112.83 Aligned_cols=133 Identities=19% Similarity=0.296 Sum_probs=99.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCC---CccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSA---GIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i 77 (138)
|||||.++||||.|.+|+|.|.+.+.... .............+.++.. |...|+++.|+|....|++++.|++|++
T Consensus 120 fs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYD-H~devn~l~FHPre~ILiS~srD~tvKl 198 (430)
T KOG0640|consen 120 FSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYD-HVDEVNDLDFHPRETILISGSRDNTVKL 198 (430)
T ss_pred eCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhh-ccCcccceeecchhheEEeccCCCeEEE
Confidence 79999999999999999999986432211 1112222233456788887 8999999999999999999999999999
Q ss_pred EeccCCCCC-------------------C------------------ceeeeeeeeeeecccccceeEEEEccCCCCEEE
Q psy14817 78 FKENPEAGD-------------------S------------------DMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA 120 (138)
Q Consensus 78 ~~~~~~~~~-------------------~------------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 120 (138)
||+.....+ . +............+|+..|+++.+++. +.+.+
T Consensus 199 FDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t-~~lYv 277 (430)
T KOG0640|consen 199 FDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSST-GSLYV 277 (430)
T ss_pred EecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccceeEEEecCC-ccEEE
Confidence 999865400 0 000111112233578899999999999 99999
Q ss_pred EEeCCCcEEEEEcCC
Q psy14817 121 SCSDDGDVKLWQIKL 135 (138)
Q Consensus 121 ~~~~d~~v~~wd~~~ 135 (138)
+++.||.|++||--+
T Consensus 278 TaSkDG~IklwDGVS 292 (430)
T KOG0640|consen 278 TASKDGAIKLWDGVS 292 (430)
T ss_pred EeccCCcEEeecccc
Confidence 999999999999543
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-20 Score=120.51 Aligned_cols=118 Identities=21% Similarity=0.347 Sum_probs=88.8
Q ss_pred CccC-CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC-CCccCeEEEEEecCCCeEEEeeCCCcEEEE
Q psy14817 1 MIQT-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-HHGRTIYDISWCHLTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~-~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~ 78 (138)
|+|. .+.|.|+++||++|||++..... ..+.+.+... ...-.++.+.|++++.+|++|+.||+|++|
T Consensus 276 whP~~k~~FlT~s~DgtlRiWdv~~~k~-----------q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W 344 (641)
T KOG0772|consen 276 WHPDNKEEFLTCSYDGTLRIWDVNNTKS-----------QLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIW 344 (641)
T ss_pred cccCcccceEEecCCCcEEEEecCCchh-----------heeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeee
Confidence 5664 46899999999999999865432 1122322211 134578899999999999999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeeccccc--ceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQ--DVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+..... ..+ ......+|.. .|+++.|+++ +++|++-+.|.++++||+|+.+
T Consensus 345 ~~~~~~---v~p----~~~vk~AH~~g~~Itsi~FS~d-g~~LlSRg~D~tLKvWDLrq~k 397 (641)
T KOG0772|consen 345 DKGSRT---VRP----VMKVKDAHLPGQDITSISFSYD-GNYLLSRGFDDTLKVWDLRQFK 397 (641)
T ss_pred ecCCcc---ccc----ceEeeeccCCCCceeEEEeccc-cchhhhccCCCceeeeeccccc
Confidence 986433 111 2223346765 9999999999 9999999999999999998753
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-19 Score=116.61 Aligned_cols=105 Identities=25% Similarity=0.425 Sum_probs=91.1
Q ss_pred eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCC
Q psy14817 7 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 86 (138)
Q Consensus 7 ~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~ 86 (138)
.++||++|++|.+|+ .+..+.-.++.. |...|.|++|+|+|.+|++++.||++.+||=..++
T Consensus 162 Ri~T~sdDn~v~ffe---------------GPPFKFk~s~r~-HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge-- 223 (603)
T KOG0318|consen 162 RIATGSDDNTVAFFE---------------GPPFKFKSSFRE-HSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGE-- 223 (603)
T ss_pred EEEeccCCCeEEEee---------------CCCeeeeecccc-cccceeeEEECCCCCeEEEecCCccEEEEcCCCcc--
Confidence 699999999999999 455566667777 88899999999999999999999999999988776
Q ss_pred Cceeeeeeeeee---ecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCCC
Q psy14817 87 SDMVSFDLVHTE---HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 138 (138)
Q Consensus 87 ~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~ 138 (138)
.... ..+|.+.|.+++|+|+ +..+++++.|.+++|||+.+.++
T Consensus 224 --------~vg~l~~~~aHkGsIfalsWsPD-s~~~~T~SaDkt~KIWdVs~~sl 269 (603)
T KOG0318|consen 224 --------KVGELEDSDAHKGSIFALSWSPD-STQFLTVSADKTIKIWDVSTNSL 269 (603)
T ss_pred --------EEEEecCCCCccccEEEEEECCC-CceEEEecCCceEEEEEeeccce
Confidence 2222 2389999999999999 99999999999999999987653
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.7e-20 Score=114.70 Aligned_cols=117 Identities=18% Similarity=0.303 Sum_probs=98.1
Q ss_pred Ccc-CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEE
Q psy14817 1 MIQ-TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~-~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~ 78 (138)
|+| +.+.||+||+|.+|+||.+...... ....+++..+.+ |...|.-|.|+|... .|++++.|.+|.+|
T Consensus 89 w~PfnD~vIASgSeD~~v~vW~IPe~~l~--------~~ltepvv~L~g-H~rrVg~V~wHPtA~NVLlsag~Dn~v~iW 159 (472)
T KOG0303|consen 89 WCPFNDCVIASGSEDTKVMVWQIPENGLT--------RDLTEPVVELYG-HQRRVGLVQWHPTAPNVLLSAGSDNTVSIW 159 (472)
T ss_pred cCccCCceeecCCCCceEEEEECCCcccc--------cCcccceEEEee-cceeEEEEeecccchhhHhhccCCceEEEE
Confidence 344 6789999999999999998654432 222366888899 999999999999876 88999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 138 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~ 138 (138)
++..++ ..... .|...|+++.|+-+ +..+++++.|.+|||||.|++++
T Consensus 160 nv~tge----------ali~l-~hpd~i~S~sfn~d-Gs~l~TtckDKkvRv~dpr~~~~ 207 (472)
T KOG0303|consen 160 NVGTGE----------ALITL-DHPDMVYSMSFNRD-GSLLCTTCKDKKVRVIDPRRGTV 207 (472)
T ss_pred eccCCc----------eeeec-CCCCeEEEEEeccC-CceeeeecccceeEEEcCCCCcE
Confidence 999887 22223 49999999999999 99999999999999999998863
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.5e-20 Score=121.51 Aligned_cols=105 Identities=28% Similarity=0.518 Sum_probs=97.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|..+.+||+|.|++|+||.+ ....|++++.+ |...|..+.|-.++..|++++.||.+++|++
T Consensus 513 Fs~~dq~laT~SgD~TvKIW~i---------------s~fSClkT~eG-H~~aVlra~F~~~~~qliS~~adGliKlWni 576 (775)
T KOG0319|consen 513 FSKNDQLLATCSGDKTVKIWSI---------------STFSCLKTFEG-HTSAVLRASFIRNGKQLISAGADGLIKLWNI 576 (775)
T ss_pred eccccceeEeccCCceEEEEEe---------------ccceeeeeecC-ccceeEeeeeeeCCcEEEeccCCCcEEEEec
Confidence 7899999999999999999996 44588999999 9999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEE
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd 132 (138)
.... +...+..|.+.|++++.++. ..++++|+.||.|.+|.
T Consensus 577 kt~e----------C~~tlD~H~DrvWaL~~~~~-~~~~~tgg~Dg~i~~wk 617 (775)
T KOG0319|consen 577 KTNE----------CEMTLDAHNDRVWALSVSPL-LDMFVTGGGDGRIIFWK 617 (775)
T ss_pred cchh----------hhhhhhhccceeEEEeecCc-cceeEecCCCeEEEEee
Confidence 9887 66667799999999999999 88999999999999994
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.3e-19 Score=116.68 Aligned_cols=109 Identities=17% Similarity=0.360 Sum_probs=85.9
Q ss_pred CccCC-CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~-~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|++ ++|++|+.|++|+|||+... +.+..+.. |...|.+++|+|++.++++++.|++|++||
T Consensus 133 f~P~~~~iLaSgs~DgtVrIWDl~tg---------------~~~~~l~~-h~~~V~sla~spdG~lLatgs~Dg~IrIwD 196 (493)
T PTZ00421 133 FHPSAMNVLASAGADMVVNVWDVERG---------------KAVEVIKC-HSDQITSLEWNLDGSLLCTTSKDKKLNIID 196 (493)
T ss_pred eCcCCCCEEEEEeCCCEEEEEECCCC---------------eEEEEEcC-CCCceEEEEEECCCCEEEEecCCCEEEEEE
Confidence 67875 69999999999999997543 34667777 888999999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccc-eeEEEEccCCCCEEEEEe----CCCcEEEEEcCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQD-VNCVAWNPVVPGMLASCS----DDGDVKLWQIKLE 136 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~----~d~~v~~wd~~~~ 136 (138)
++.+. .......|... +..+.|.++ ...+++++ .|+.|++||++..
T Consensus 197 ~rsg~----------~v~tl~~H~~~~~~~~~w~~~-~~~ivt~G~s~s~Dr~VklWDlr~~ 247 (493)
T PTZ00421 197 PRDGT----------IVSSVEAHASAKSQRCLWAKR-KDLIITLGCSKSQQRQIMLWDTRKM 247 (493)
T ss_pred CCCCc----------EEEEEecCCCCcceEEEEcCC-CCeEEEEecCCCCCCeEEEEeCCCC
Confidence 99765 23333456543 446778888 66666554 4799999999864
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-19 Score=107.76 Aligned_cols=110 Identities=22% Similarity=0.510 Sum_probs=92.5
Q ss_pred ccC-CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEe
Q psy14817 2 IQT-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFK 79 (138)
Q Consensus 2 s~~-~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~ 79 (138)
+++ .+.+++++.||++++||+..+. .|+..++. |+..|.++.|++... .+++++=|++|++|+
T Consensus 69 se~~e~~~~~a~GDGSLrl~d~~~~s--------------~Pi~~~kE-H~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~ 133 (311)
T KOG0277|consen 69 SENHENQVIAASGDGSLRLFDLTMPS--------------KPIHKFKE-HKREVYSVDWNTVRRRIFLTSSWDGTIKLWD 133 (311)
T ss_pred cCCCcceEEEEecCceEEEeccCCCC--------------cchhHHHh-hhhheEEeccccccceeEEeeccCCceEeec
Confidence 443 3578899999999999953322 46888888 999999999998765 778889999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
..... ....+.+|...|....|+|..++.+++++.|+.+++||+|..
T Consensus 134 ~~r~~----------Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~ 180 (311)
T KOG0277|consen 134 PNRPN----------SVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSP 180 (311)
T ss_pred CCCCc----------ceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCC
Confidence 88765 444567999999999999998999999999999999999864
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.2e-19 Score=110.69 Aligned_cols=134 Identities=22% Similarity=0.338 Sum_probs=99.3
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCC----------ccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAG----------IPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 71 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~ 71 (138)
.++|..+++||.|.+|+||+......... ...........++..+.+ |.++|.+|.|++ ...+++++-
T Consensus 202 ~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~G-Ht~~Vs~V~w~d-~~v~yS~Sw 279 (423)
T KOG0313|consen 202 DSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEG-HTEPVSSVVWSD-ATVIYSVSW 279 (423)
T ss_pred cCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecc-cccceeeEEEcC-CCceEeecc
Confidence 46899999999999999999322211100 111122344567888888 999999999998 678899999
Q ss_pred CCcEEEEeccCCCCCCc----------------------------------eeeeeeeeeeecccccceeEEEEccCCCC
Q psy14817 72 DDAIRIFKENPEAGDSD----------------------------------MVSFDLVHTEHRAHNQDVNCVAWNPVVPG 117 (138)
Q Consensus 72 d~~i~i~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 117 (138)
|++|+.||+..+..... ...-......+.+|.+.|.++.|+|.+..
T Consensus 280 DHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~ 359 (423)
T KOG0313|consen 280 DHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEF 359 (423)
T ss_pred cceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCce
Confidence 99999999997751100 00112234455689999999999999788
Q ss_pred EEEEEeCCCcEEEEEcCCCC
Q psy14817 118 MLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 118 ~l~~~~~d~~v~~wd~~~~~ 137 (138)
+|++++.|+++++||+|+..
T Consensus 360 ~~~S~S~D~t~klWDvRS~k 379 (423)
T KOG0313|consen 360 QLVSGSYDNTVKLWDVRSTK 379 (423)
T ss_pred EEEEEecCCeEEEEEeccCC
Confidence 99999999999999999754
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.5e-19 Score=104.91 Aligned_cols=108 Identities=28% Similarity=0.501 Sum_probs=90.2
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEeccC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENP 82 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~ 82 (138)
+++.++++|.|++|++|+...+ +.+.++.+ |..-|....|+|.-+ ++++++.|+++++||++.
T Consensus 116 ~r~~~ltsSWD~TiKLW~~~r~---------------~Sv~Tf~g-h~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~ 179 (311)
T KOG0277|consen 116 RRRIFLTSSWDGTIKLWDPNRP---------------NSVQTFNG-HNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRS 179 (311)
T ss_pred cceeEEeeccCCceEeecCCCC---------------cceEeecC-CccEEEEEecCCCCCCeEEEccCCceEEEEEecC
Confidence 4567888999999999996444 34888999 899999999999765 999999999999999986
Q ss_pred CCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 83 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.. .......|...+.++.|+.-+.+++++|+.|+.|++||+|.-+
T Consensus 180 ~g----------k~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r 224 (311)
T KOG0277|consen 180 PG----------KFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLR 224 (311)
T ss_pred CC----------ceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhcc
Confidence 53 1122347888999999997668999999999999999998653
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.4e-19 Score=112.57 Aligned_cols=113 Identities=20% Similarity=0.306 Sum_probs=95.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
||++|++|||++.|.+..+|.+-... ..+..+++.+ |..+|..+.|+||.+++++++.+..+.+||.
T Consensus 232 FS~nGkyLAsaSkD~Taiiw~v~~d~------------~~kl~~tlvg-h~~~V~yi~wSPDdryLlaCg~~e~~~lwDv 298 (519)
T KOG0293|consen 232 FSHNGKYLASASKDSTAIIWIVVYDV------------HFKLKKTLVG-HSQPVSYIMWSPDDRYLLACGFDEVLSLWDV 298 (519)
T ss_pred EcCCCeeEeeccCCceEEEEEEecCc------------ceeeeeeeec-ccCceEEEEECCCCCeEEecCchHheeeccC
Confidence 79999999999999999999974322 1356788888 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeee-cccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEH-RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..+. ..... .++...+.+++|.|+ +..+++|+.|+.+..||+....
T Consensus 299 ~tgd----------~~~~y~~~~~~S~~sc~W~pD-g~~~V~Gs~dr~i~~wdlDgn~ 345 (519)
T KOG0293|consen 299 DTGD----------LRHLYPSGLGFSVSSCAWCPD-GFRFVTGSPDRTIIMWDLDGNI 345 (519)
T ss_pred Ccch----------hhhhcccCcCCCcceeEEccC-CceeEecCCCCcEEEecCCcch
Confidence 9886 22222 234578999999999 9999999999999999987653
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.8e-19 Score=116.61 Aligned_cols=112 Identities=24% Similarity=0.438 Sum_probs=97.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~ 79 (138)
.+|...++.|+|+|-+|++||. ...|.|.+++.+ |..-|.+++|+|... .|++++.|++|++|.
T Consensus 105 vHPt~P~vLtsSDDm~iKlW~w--------------e~~wa~~qtfeG-H~HyVMqv~fnPkD~ntFaS~sLDrTVKVWs 169 (794)
T KOG0276|consen 105 VHPTLPYVLTSSDDMTIKLWDW--------------ENEWACEQTFEG-HEHYVMQVAFNPKDPNTFASASLDRTVKVWS 169 (794)
T ss_pred ecCCCCeEEecCCccEEEEeec--------------cCceeeeeEEcC-cceEEEEEEecCCCccceeeeeccccEEEEE
Confidence 4789999999999999999996 677899999999 999999999999765 999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccC-CCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV-VPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.... +.-.+.+|...|+++.+-+. +..+|++|+.|.+++|||.+++.
T Consensus 170 lgs~~----------~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~ 218 (794)
T KOG0276|consen 170 LGSPH----------PNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKS 218 (794)
T ss_pred cCCCC----------CceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHH
Confidence 98765 33344599999999999764 25699999999999999998753
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.4e-18 Score=121.36 Aligned_cols=118 Identities=23% Similarity=0.362 Sum_probs=90.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC-CCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL-TDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~s~~~d~~i~i~~ 79 (138)
|+|+|++||+|+.|+.|+||+........ .....+...+. +...+.+++|++. +.++++++.|++|++||
T Consensus 491 fs~dg~~latgg~D~~I~iwd~~~~~~~~-------~~~~~~~~~~~--~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd 561 (793)
T PLN00181 491 FDRDGEFFATAGVNKKIKIFECESIIKDG-------RDIHYPVVELA--SRSKLSGICWNSYIKSQVASSNFEGVVQVWD 561 (793)
T ss_pred ECCCCCEEEEEeCCCEEEEEECCcccccc-------cccccceEEec--ccCceeeEEeccCCCCEEEEEeCCCeEEEEE
Confidence 68999999999999999999975321100 00011223333 3467899999875 56999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.... .......|...|++++|+|.++.+|++++.|+.|++||++++.
T Consensus 562 ~~~~~----------~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~ 609 (793)
T PLN00181 562 VARSQ----------LVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV 609 (793)
T ss_pred CCCCe----------EEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCc
Confidence 98654 3444568999999999997438899999999999999998653
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.1e-20 Score=113.10 Aligned_cols=102 Identities=25% Similarity=0.483 Sum_probs=90.3
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
+.++++++|.|++|++|++ .+.+++.++.+ |+..|-|+.+ .+.++++|+.|.+|++||+..+
T Consensus 329 d~kyIVsASgDRTikvW~~---------------st~efvRtl~g-HkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G 390 (499)
T KOG0281|consen 329 DDKYIVSASGDRTIKVWST---------------STCEFVRTLNG-HKRGIACLQY--RDRLVVSGSSDNTIRLWDIECG 390 (499)
T ss_pred ccceEEEecCCceEEEEec---------------cceeeehhhhc-ccccceehhc--cCeEEEecCCCceEEEEecccc
Confidence 5679999999999999995 34467899999 8999999887 4789999999999999999988
Q ss_pred CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 84 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
. +.+.+.+|+.-|.++.| + ...+++|+.||+|++||+..+
T Consensus 391 ~----------cLRvLeGHEeLvRciRF--d-~krIVSGaYDGkikvWdl~aa 430 (499)
T KOG0281|consen 391 A----------CLRVLEGHEELVRCIRF--D-NKRIVSGAYDGKIKVWDLQAA 430 (499)
T ss_pred H----------HHHHHhchHHhhhheee--c-CceeeeccccceEEEEecccc
Confidence 7 77778899999999999 3 678999999999999999765
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.2e-19 Score=111.11 Aligned_cols=115 Identities=30% Similarity=0.506 Sum_probs=92.6
Q ss_pred CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEeccCCC
Q psy14817 6 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 6 ~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~ 84 (138)
-.+++++.|+.|++||+...... .....+...+.+ |...|..++|++... +|+++++|+.+.|||.+...
T Consensus 191 g~Lls~~~d~~i~lwdi~~~~~~--------~~~~~p~~~~~~-h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~ 261 (422)
T KOG0264|consen 191 GTLLSGSDDHTICLWDINAESKE--------DKVVDPKTIFSG-HEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNT 261 (422)
T ss_pred eeEeeccCCCcEEEEeccccccC--------CccccceEEeec-CCcceehhhccccchhhheeecCCCeEEEEEcCCCC
Confidence 47899999999999998765442 122344566777 899999999999775 89999999999999999521
Q ss_pred CCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 85 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
. .......+|...|++++|+|-+..+|++|+.|++|++||+|...
T Consensus 262 ---~-----~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~ 306 (422)
T KOG0264|consen 262 ---S-----KPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLN 306 (422)
T ss_pred ---C-----CCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcc
Confidence 0 13334458999999999999878899999999999999998753
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.7e-18 Score=115.45 Aligned_cols=109 Identities=22% Similarity=0.370 Sum_probs=94.4
Q ss_pred CccCCCeEEEeeCC-CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDD-ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d-~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+..|.+||-|+.. |.+-||+.+.. ..+...++ |...+++++++|||+++++|+.||+|+|||
T Consensus 315 ~N~tGDWiA~g~~klgQLlVweWqsE---------------sYVlKQQg-H~~~i~~l~YSpDgq~iaTG~eDgKVKvWn 378 (893)
T KOG0291|consen 315 FNSTGDWIAFGCSKLGQLLVWEWQSE---------------SYVLKQQG-HSDRITSLAYSPDGQLIATGAEDGKVKVWN 378 (893)
T ss_pred ecccCCEEEEcCCccceEEEEEeecc---------------ceeeeccc-cccceeeEEECCCCcEEEeccCCCcEEEEe
Confidence 45678999988754 79999997544 22556677 899999999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
...+- +...+..|+..|+.++|+.. ++.+++.+.||+|+.||+...
T Consensus 379 ~~Sgf----------C~vTFteHts~Vt~v~f~~~-g~~llssSLDGtVRAwDlkRY 424 (893)
T KOG0291|consen 379 TQSGF----------CFVTFTEHTSGVTAVQFTAR-GNVLLSSSLDGTVRAWDLKRY 424 (893)
T ss_pred ccCce----------EEEEeccCCCceEEEEEEec-CCEEEEeecCCeEEeeeeccc
Confidence 99875 66677799999999999999 999999999999999998754
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.5e-18 Score=112.18 Aligned_cols=127 Identities=23% Similarity=0.302 Sum_probs=103.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|....|++|+.|+.+++|+++..... .....+++.+|.+ |.++|.|+++.+.+..+++|+.||+|+.|++
T Consensus 302 ~~~sep~lit~sed~~lk~WnLqk~~~s-------~~~~~epi~tfra-H~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~ 373 (577)
T KOG0642|consen 302 FHPSEPVLITASEDGTLKLWNLQKAKKS-------AEKDVEPILTFRA-HEGPVLCVVVPSNGEHCYSGGIDGTIRCWNL 373 (577)
T ss_pred cCCCCCeEEEeccccchhhhhhcccCCc-------cccceeeeEEEec-ccCceEEEEecCCceEEEeeccCceeeeecc
Confidence 4566778999999999999999542221 2345588999999 9999999999999999999999999999988
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.....+-+..........+.+|+..|+.+++++. .+.|++++.||+++.|.....
T Consensus 374 p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~-~~~Llscs~DgTvr~w~~~~~ 428 (577)
T KOG0642|consen 374 PPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSST-KDRLLSCSSDGTVRLWEPTEE 428 (577)
T ss_pred CCCCCcccccCcchhccceeccccceeeeeeccc-ccceeeecCCceEEeeccCCc
Confidence 8544333334333445556799999999999998 889999999999999987543
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.5e-18 Score=109.00 Aligned_cols=129 Identities=21% Similarity=0.276 Sum_probs=97.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC--eEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD--LIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~--~~~s~~~d~~i~i~ 78 (138)
|+-||.+|+|||.||.|.+|.+........ ....+++..+.. |.-+|+.+...+.|. ++++++.|.++++|
T Consensus 131 fs~dgs~iiTgskDg~V~vW~l~~lv~a~~------~~~~~p~~~f~~-HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~w 203 (476)
T KOG0646|consen 131 FSDDGSHIITGSKDGAVLVWLLTDLVSADN------DHSVKPLHIFSD-HTLSITDLQIGSGGTNARLYTASEDRTIKLW 203 (476)
T ss_pred EeCCCcEEEecCCCccEEEEEEEeeccccc------CCCccceeeecc-CcceeEEEEecCCCccceEEEecCCceEEEE
Confidence 577999999999999999999754332211 224467888888 999999999887754 99999999999999
Q ss_pred eccCCC---------------------------CCCc------------ee--------eeeeeeeeeccccc--ceeEE
Q psy14817 79 KENPEA---------------------------GDSD------------MV--------SFDLVHTEHRAHNQ--DVNCV 109 (138)
Q Consensus 79 ~~~~~~---------------------------~~~~------------~~--------~~~~~~~~~~~~~~--~v~~~ 109 (138)
|+..+. .... .. ........+.+|.+ .|+|+
T Consensus 204 dlS~g~LLlti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcL 283 (476)
T KOG0646|consen 204 DLSLGVLLLTITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCL 283 (476)
T ss_pred EeccceeeEEEecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEE
Confidence 999775 0000 00 00001223456776 99999
Q ss_pred EEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 110 AWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 110 ~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+++-+ +..|++|+.||+++|||+.+.+
T Consensus 284 ais~D-gtlLlSGd~dg~VcvWdi~S~Q 310 (476)
T KOG0646|consen 284 AISTD-GTLLLSGDEDGKVCVWDIYSKQ 310 (476)
T ss_pred EEecC-ccEEEeeCCCCCEEEEecchHH
Confidence 99999 9999999999999999987654
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.1e-19 Score=113.52 Aligned_cols=109 Identities=18% Similarity=0.324 Sum_probs=91.9
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEec
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKE 80 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~ 80 (138)
-.||+++|+|.+.|.|+|||+.. ...+..+.. |+.++..+.|+|+.. .+++|++|+.+++||+
T Consensus 77 R~DG~LlaaGD~sG~V~vfD~k~---------------r~iLR~~~a-h~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~ 140 (487)
T KOG0310|consen 77 RSDGRLLAAGDESGHVKVFDMKS---------------RVILRQLYA-HQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDL 140 (487)
T ss_pred ecCCeEEEccCCcCcEEEecccc---------------HHHHHHHhh-ccCceeEEEecccCCeEEEecCCCceEEEEEc
Confidence 46899999999999999999422 112456677 899999999999876 8888999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.... ......+|+..|.+.+|+|.+..++++|+.||+|++||.|..
T Consensus 141 s~a~----------v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~ 186 (487)
T KOG0310|consen 141 STAY----------VQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSL 186 (487)
T ss_pred CCcE----------EEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccC
Confidence 8765 333456899999999999986779999999999999999875
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.9e-18 Score=107.23 Aligned_cols=109 Identities=19% Similarity=0.272 Sum_probs=90.7
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC-CCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-HHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
+|+|.||++++.|++..+.|++.... +..... ...-.+++.+|+|||..|.+|..|+.++|||+
T Consensus 312 h~tgeYllsAs~d~~w~Fsd~~~g~~---------------lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdl 376 (506)
T KOG0289|consen 312 HPTGEYLLSASNDGTWAFSDISSGSQ---------------LTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDL 376 (506)
T ss_pred ccCCcEEEEecCCceEEEEEccCCcE---------------EEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEc
Confidence 68999999999999999999755422 222221 02346899999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.... ....+.+|+++|..++|+.+ +.+|++++.|+.|++||+|..
T Consensus 377 ks~~----------~~a~Fpght~~vk~i~FsEN-GY~Lat~add~~V~lwDLRKl 421 (506)
T KOG0289|consen 377 KSQT----------NVAKFPGHTGPVKAISFSEN-GYWLATAADDGSVKLWDLRKL 421 (506)
T ss_pred CCcc----------ccccCCCCCCceeEEEeccC-ceEEEEEecCCeEEEEEehhh
Confidence 9765 44455689999999999998 999999999999999999854
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.8e-19 Score=117.87 Aligned_cols=114 Identities=20% Similarity=0.389 Sum_probs=96.1
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEeccC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENP 82 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~ 82 (138)
|.+.||.+++||.|++|.+.....+.. ...+...+.. |...|.+++|+|-.. .+++++.|.+|++||+..
T Consensus 639 D~~rLAVa~ddg~i~lWr~~a~gl~e~--------~~tPe~~lt~-h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~ 709 (1012)
T KOG1445|consen 639 DDERLAVATDDGQINLWRLTANGLPEN--------EMTPEKILTI-HGEKITSLRFHPLAADVLAVASYDSTIELWDLAN 709 (1012)
T ss_pred ChHHeeecccCceEEEEEeccCCCCcc--------cCCcceeeec-ccceEEEEEecchhhhHhhhhhccceeeeeehhh
Confidence 567899999999999999977655432 2234556666 899999999999765 899999999999999998
Q ss_pred CCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 83 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.. ....+.+|++.|..++|+|+ ++.+++.+.||+|+++..+.++
T Consensus 710 ~~----------~~~~l~gHtdqIf~~AWSpd-Gr~~AtVcKDg~~rVy~Prs~e 753 (1012)
T KOG1445|consen 710 AK----------LYSRLVGHTDQIFGIAWSPD-GRRIATVCKDGTLRVYEPRSRE 753 (1012)
T ss_pred hh----------hhheeccCcCceeEEEECCC-CcceeeeecCceEEEeCCCCCC
Confidence 76 44445699999999999999 9999999999999999987654
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.4e-19 Score=119.80 Aligned_cols=110 Identities=13% Similarity=0.227 Sum_probs=98.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|...++.++-..|.|.+||.+-. .++..|.. |.++|..+.|+|++++|++|++|-.|++|+.
T Consensus 17 FHP~rPwILtslHsG~IQlWDYRM~---------------tli~rFde-HdGpVRgv~FH~~qplFVSGGDDykIkVWnY 80 (1202)
T KOG0292|consen 17 FHPKRPWILTSLHSGVIQLWDYRMG---------------TLIDRFDE-HDGPVRGVDFHPTQPLFVSGGDDYKIKVWNY 80 (1202)
T ss_pred cCCCCCEEEEeecCceeeeehhhhh---------------hHHhhhhc-cCCccceeeecCCCCeEEecCCccEEEEEec
Confidence 7899999999999999999997644 34778888 9999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.... +.-.+.+|-..|+.+.|++. ..+++++|.|.+|+||+..+.+
T Consensus 81 k~rr----------clftL~GHlDYVRt~~FHhe-yPWIlSASDDQTIrIWNwqsr~ 126 (1202)
T KOG0292|consen 81 KTRR----------CLFTLLGHLDYVRTVFFHHE-YPWILSASDDQTIRIWNWQSRK 126 (1202)
T ss_pred ccce----------ehhhhccccceeEEeeccCC-CceEEEccCCCeEEEEeccCCc
Confidence 9776 44445699999999999998 9999999999999999988764
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.9e-18 Score=105.18 Aligned_cols=107 Identities=19% Similarity=0.290 Sum_probs=91.9
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC--eEEEeeCCCcEEEEecc
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD--LIATACGDDAIRIFKEN 81 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~--~~~s~~~d~~i~i~~~~ 81 (138)
+++++|+||.|.+|+|||++.... +..+.. |.+.|+++.|.+.-. .|++|+.||.|.+|+..
T Consensus 52 s~~~~aSGssDetI~IYDm~k~~q---------------lg~ll~-HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~ 115 (362)
T KOG0294|consen 52 SGPYVASGSSDETIHIYDMRKRKQ---------------LGILLS-HAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVG 115 (362)
T ss_pred cceeEeccCCCCcEEEEeccchhh---------------hcceec-cccceEEEEecCCcchhheeeecCCCcEEEEEcC
Confidence 689999999999999999865433 455555 899999999988775 99999999999999987
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.=. ....+++|...|+.++++|. +.+-++.+.|+.++.|++-+++
T Consensus 116 ~W~----------~~~slK~H~~~Vt~lsiHPS-~KLALsVg~D~~lr~WNLV~Gr 160 (362)
T KOG0294|consen 116 SWE----------LLKSLKAHKGQVTDLSIHPS-GKLALSVGGDQVLRTWNLVRGR 160 (362)
T ss_pred CeE----------EeeeecccccccceeEecCC-CceEEEEcCCceeeeehhhcCc
Confidence 533 56667799999999999999 9999999999999999986654
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.5e-18 Score=100.21 Aligned_cols=112 Identities=37% Similarity=0.621 Sum_probs=91.9
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec--CCCeEEEeeCCCcEEEEecc
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH--LTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~s~~~d~~i~i~~~~ 81 (138)
-|+.|||||.|++|+||..+..... +.+.++.+ |.++|..+.|.. .|.+|++++.||.|.||...
T Consensus 22 ygkrlATcsSD~tVkIf~v~~n~~s------------~ll~~L~G-h~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~ 88 (299)
T KOG1332|consen 22 YGKRLATCSSDGTVKIFEVRNNGQS------------KLLAELTG-HSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEE 88 (299)
T ss_pred hcceeeeecCCccEEEEEEcCCCCc------------eeeeEecC-CCCCeeEEeecccccCcEeeEeecCceEEEEecC
Confidence 3789999999999999998765432 56889999 999999999986 77899999999999999877
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCC-CCEEEEEeCCCcEEEEEcCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV-PGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.+. + ........|...|++++|.|.+ +-.|+.++.||.|.+.+++..
T Consensus 89 ~g~-------w-~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~ 136 (299)
T KOG1332|consen 89 NGR-------W-TKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSS 136 (299)
T ss_pred CCc-------h-hhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCC
Confidence 653 1 1233345789999999999974 346889999999999998764
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-18 Score=103.26 Aligned_cols=120 Identities=25% Similarity=0.507 Sum_probs=94.0
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+.|.++|+||+.+..+||||+..+..+ ...+.+ |.+.|..+.|+...+.|+++.+|++|++||.
T Consensus 108 f~~ds~~lltgg~ekllrvfdln~p~Ap--------------p~E~~g-htg~Ir~v~wc~eD~~iLSSadd~tVRLWD~ 172 (334)
T KOG0278|consen 108 FSQDSNYLLTGGQEKLLRVFDLNRPKAP--------------PKEISG-HTGGIRTVLWCHEDKCILSSADDKTVRLWDH 172 (334)
T ss_pred ecccchhhhccchHHHhhhhhccCCCCC--------------chhhcC-CCCcceeEEEeccCceEEeeccCCceEEEEe
Confidence 6788999999999999999998665432 346677 8999999999998899999899999999999
Q ss_pred cCCCCCC-----------------------------------------------------------------c--eeeee
Q psy14817 81 NPEAGDS-----------------------------------------------------------------D--MVSFD 93 (138)
Q Consensus 81 ~~~~~~~-----------------------------------------------------------------~--~~~~~ 93 (138)
+.+.... + .+.++
T Consensus 173 rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~~fVaGged~~~~kfD 252 (334)
T KOG0278|consen 173 RTGTEVQSLEFNSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKEFFVAGGEDFKVYKFD 252 (334)
T ss_pred ccCcEEEEEecCCCCcceeeccCCCEEEEecCceeEEeccccccceeeccCccccccccccCCCceEEecCcceEEEEEe
Confidence 9875000 0 00000
Q ss_pred e-----eeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 94 L-----VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 94 ~-----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
. +....++|-++|.+++|+|+ +...++|+.||+|++|....+
T Consensus 253 y~TgeEi~~~nkgh~gpVhcVrFSPd-GE~yAsGSEDGTirlWQt~~~ 299 (334)
T KOG0278|consen 253 YNTGEEIGSYNKGHFGPVHCVRFSPD-GELYASGSEDGTIRLWQTTPG 299 (334)
T ss_pred ccCCceeeecccCCCCceEEEEECCC-CceeeccCCCceEEEEEecCC
Confidence 0 11123678899999999999 999999999999999987654
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.8e-17 Score=115.93 Aligned_cols=106 Identities=17% Similarity=0.348 Sum_probs=86.6
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec-CCCeEEEeeCCCcEEEEeccC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATACGDDAIRIFKENP 82 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~s~~~d~~i~i~~~~~ 82 (138)
++++||+++.|++|++||+... +.+..+.+ |...|++++|+| ++.+|++|+.|+.|++||++.
T Consensus 544 ~~~~las~~~Dg~v~lWd~~~~---------------~~~~~~~~-H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~ 607 (793)
T PLN00181 544 IKSQVASSNFEGVVQVWDVARS---------------QLVTEMKE-HEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ 607 (793)
T ss_pred CCCEEEEEeCCCeEEEEECCCC---------------eEEEEecC-CCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCC
Confidence 5789999999999999997432 44677777 899999999997 678999999999999999986
Q ss_pred CCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 83 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+. ...... +...+.++.|++..+.++++|+.|+.|++||++..
T Consensus 608 ~~----------~~~~~~-~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~ 650 (793)
T PLN00181 608 GV----------SIGTIK-TKANICCVQFPSESGRSLAFGSADHKVYYYDLRNP 650 (793)
T ss_pred Cc----------EEEEEe-cCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCC
Confidence 54 222222 33578899996544899999999999999999864
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.8e-18 Score=110.14 Aligned_cols=118 Identities=22% Similarity=0.433 Sum_probs=93.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEe--eCCCcEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATA--CGDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~--~~d~~i~i 77 (138)
|+++++++|+|+.|+.+.|||.... .+...+.. |..+|..++|+|-.. +||+| +.|+.|++
T Consensus 309 ws~d~~~lASGgnDN~~~Iwd~~~~---------------~p~~~~~~-H~aAVKA~awcP~q~~lLAsGGGs~D~~i~f 372 (484)
T KOG0305|consen 309 WSPDGNQLASGGNDNVVFIWDGLSP---------------EPKFTFTE-HTAAVKALAWCPWQSGLLATGGGSADRCIKF 372 (484)
T ss_pred ECCCCCeeccCCCccceEeccCCCc---------------cccEEEec-cceeeeEeeeCCCccCceEEcCCCcccEEEE
Confidence 6899999999999999999997433 33677777 999999999999876 77775 57999999
Q ss_pred EeccCCCCC-----------------------------Cceeeeee----eeeeecccccceeEEEEccCCCCEEEEEeC
Q psy14817 78 FKENPEAGD-----------------------------SDMVSFDL----VHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124 (138)
Q Consensus 78 ~~~~~~~~~-----------------------------~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 124 (138)
|+...+... .....+.. ......+|...|..++++|+ +..+++|+.
T Consensus 373 wn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPd-g~~i~t~a~ 451 (484)
T KOG0305|consen 373 WNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPD-GETIVTGAA 451 (484)
T ss_pred EEcCCCcEecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCC-CCEEEEecc
Confidence 999977500 01111111 33455689999999999999 999999999
Q ss_pred CCcEEEEEcCC
Q psy14817 125 DGDVKLWQIKL 135 (138)
Q Consensus 125 d~~v~~wd~~~ 135 (138)
|.++++|++-.
T Consensus 452 DETlrfw~~f~ 462 (484)
T KOG0305|consen 452 DETLRFWNLFD 462 (484)
T ss_pred cCcEEeccccC
Confidence 99999998744
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=5e-18 Score=107.18 Aligned_cols=107 Identities=21% Similarity=0.307 Sum_probs=89.0
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|||.+|++|..|+.|+|||+..... +..|.+ |.++|..++|+.+|.+++++++|+.|++||+
T Consensus 355 fHpDgLifgtgt~d~~vkiwdlks~~~---------------~a~Fpg-ht~~vk~i~FsENGY~Lat~add~~V~lwDL 418 (506)
T KOG0289|consen 355 FHPDGLIFGTGTPDGVVKIWDLKSQTN---------------VAKFPG-HTGPVKAISFSENGYWLATAADDGSVKLWDL 418 (506)
T ss_pred EcCCceEEeccCCCceEEEEEcCCccc---------------cccCCC-CCCceeEEEeccCceEEEEEecCCeEEEEEe
Confidence 789999999999999999999865543 677888 9999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
+... ............+..+.|.+. +.+|+.++.|-.|.+++-
T Consensus 419 RKl~---------n~kt~~l~~~~~v~s~~fD~S-Gt~L~~~g~~l~Vy~~~k 461 (506)
T KOG0289|consen 419 RKLK---------NFKTIQLDEKKEVNSLSFDQS-GTYLGIAGSDLQVYICKK 461 (506)
T ss_pred hhhc---------ccceeeccccccceeEEEcCC-CCeEEeecceeEEEEEec
Confidence 9765 122222234457999999998 999999988877776653
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=1e-18 Score=116.57 Aligned_cols=112 Identities=21% Similarity=0.458 Sum_probs=89.5
Q ss_pred Ccc-CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQ-TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~-~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+| .+..|+++.+.|.+.+||++.+.+ +...+.. |.++|.|+.|+|++.+|++|++|+.|+||+
T Consensus 184 fsp~~~~~F~s~~dsG~lqlWDlRqp~r--------------~~~k~~A-H~GpV~c~nwhPnr~~lATGGRDK~vkiWd 248 (839)
T KOG0269|consen 184 FSPGYGNKFASIHDSGYLQLWDLRQPDR--------------CEKKLTA-HNGPVLCLNWHPNREWLATGGRDKMVKIWD 248 (839)
T ss_pred eccCCCceEEEecCCceEEEeeccCchh--------------HHHHhhc-ccCceEEEeecCCCceeeecCCCccEEEEe
Confidence 455 578999999999999999987643 4556666 999999999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC--CCcEEEEEcCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD--DGDVKLWQIKLE 136 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--d~~v~~wd~~~~ 136 (138)
...... .....-....+|.+++|.|....+|++++. |..|+|||++.+
T Consensus 249 ~t~~~~---------~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRP 298 (839)
T KOG0269|consen 249 MTDSRA---------KPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRP 298 (839)
T ss_pred ccCCCc---------cceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeeccc
Confidence 986440 111111345789999999996667887764 889999999865
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-17 Score=103.13 Aligned_cols=110 Identities=19% Similarity=0.315 Sum_probs=93.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
||.+|.+||||.-+|.|+||....... ...+.. .-..+--+.|+|.+..++.|+.||.+.+|.+
T Consensus 114 FshdgtlLATGdmsG~v~v~~~stg~~---------------~~~~~~-e~~dieWl~WHp~a~illAG~~DGsvWmw~i 177 (399)
T KOG0296|consen 114 FSHDGTLLATGDMSGKVLVFKVSTGGE---------------QWKLDQ-EVEDIEWLKWHPRAHILLAGSTDGSVWMWQI 177 (399)
T ss_pred EccCceEEEecCCCccEEEEEcccCce---------------EEEeec-ccCceEEEEecccccEEEeecCCCcEEEEEC
Confidence 788999999999999999999754432 233333 3456788999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.... ....+.+|..++++-.|.|+ +..++++..||+|++|++.+++
T Consensus 178 p~~~----------~~kv~~Gh~~~ct~G~f~pd-GKr~~tgy~dgti~~Wn~ktg~ 223 (399)
T KOG0296|consen 178 PSQA----------LCKVMSGHNSPCTCGEFIPD-GKRILTGYDDGTIIVWNPKTGQ 223 (399)
T ss_pred CCcc----------eeeEecCCCCCcccccccCC-CceEEEEecCceEEEEecCCCc
Confidence 9754 45566789999999999999 9999999999999999998875
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=3e-18 Score=109.14 Aligned_cols=108 Identities=16% Similarity=0.243 Sum_probs=95.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCC-CeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~-~~~~s~~~d~~i~i~~ 79 (138)
|+++|..|.|+|.|+.|++||.+. ++++..+.. ...+.|+.|+|++ ..|++|..|+.|+.||
T Consensus 266 ~s~~g~~fLS~sfD~~lKlwDtET---------------G~~~~~f~~--~~~~~cvkf~pd~~n~fl~G~sd~ki~~wD 328 (503)
T KOG0282|consen 266 FNNCGTSFLSASFDRFLKLWDTET---------------GQVLSRFHL--DKVPTCVKFHPDNQNIFLVGGSDKKIRQWD 328 (503)
T ss_pred ccccCCeeeeeecceeeeeecccc---------------ceEEEEEec--CCCceeeecCCCCCcEEEEecCCCcEEEEe
Confidence 688999999999999999999644 466777764 5678999999999 5899999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
++.+. +......|-+.|..+.|-++ +..+++.+.|++++||+.+.+
T Consensus 329 iRs~k----------vvqeYd~hLg~i~~i~F~~~-g~rFissSDdks~riWe~~~~ 374 (503)
T KOG0282|consen 329 IRSGK----------VVQEYDRHLGAILDITFVDE-GRRFISSSDDKSVRIWENRIP 374 (503)
T ss_pred ccchH----------HHHHHHhhhhheeeeEEccC-CceEeeeccCccEEEEEcCCC
Confidence 99887 66666678899999999999 999999999999999998765
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=7e-18 Score=105.57 Aligned_cols=128 Identities=25% Similarity=0.462 Sum_probs=98.6
Q ss_pred ccCCC-eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 2 IQTGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 2 s~~~~-~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
.++.. .+|||+.|..|++|.+........ ....+.+..+.. |...|++++|+|+|.++++|+++|.+.+|..
T Consensus 22 q~n~~~~laT~G~D~~iriW~v~r~~~~~~------~~~V~y~s~Ls~-H~~aVN~vRf~p~gelLASg~D~g~v~lWk~ 94 (434)
T KOG1009|consen 22 QKNSLNKLATAGGDKDIRIWKVNRSEPGGG------DMKVEYLSSLSR-HTRAVNVVRFSPDGELLASGGDGGEVFLWKQ 94 (434)
T ss_pred ccCcccceecccCccceeeeeeeecCCCCC------ceeEEEeecccC-CcceeEEEEEcCCcCeeeecCCCceEEEEEe
Confidence 34443 899999999999999866544221 234455667777 8999999999999999999999999999976
Q ss_pred cCCC-------CCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCCC
Q psy14817 81 NPEA-------GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 138 (138)
Q Consensus 81 ~~~~-------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~ 138 (138)
.... ...+...+ ........|...|..++|+|+ +.++++++.|..+++||++.+++
T Consensus 95 ~~~~~~~~d~e~~~~ke~w-~v~k~lr~h~~diydL~Ws~d-~~~l~s~s~dns~~l~Dv~~G~l 157 (434)
T KOG1009|consen 95 GDVRIFDADTEADLNKEKW-VVKKVLRGHRDDIYDLAWSPD-SNFLVSGSVDNSVRLWDVHAGQL 157 (434)
T ss_pred cCcCCccccchhhhCccce-EEEEEecccccchhhhhccCC-CceeeeeeccceEEEEEecccee
Confidence 6211 01112222 334455679999999999999 99999999999999999988764
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.7e-18 Score=105.63 Aligned_cols=109 Identities=18% Similarity=0.382 Sum_probs=91.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~ 79 (138)
++|..++||+||.|..+++||.+..... -..+.+.+ |+..|.++.|+|... +|++++.|+++++||
T Consensus 308 ~~~~~~Ll~~gssdr~irl~DPR~~~gs------------~v~~s~~g-H~nwVssvkwsp~~~~~~~S~S~D~t~klWD 374 (423)
T KOG0313|consen 308 YSPLSKLLASGSSDRHIRLWDPRTGDGS------------VVSQSLIG-HKNWVSSVKWSPTNEFQLVSGSYDNTVKLWD 374 (423)
T ss_pred cccccceeeecCCCCceeecCCCCCCCc------------eeEEeeec-chhhhhheecCCCCceEEEEEecCCeEEEEE
Confidence 3577889999999999999998776432 33577888 899999999999887 899999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
++... .......+|...|.++.|.. +..+++|+.|.+|+++.-
T Consensus 375 vRS~k---------~plydI~~h~DKvl~vdW~~--~~~IvSGGaD~~l~i~~~ 417 (423)
T KOG0313|consen 375 VRSTK---------APLYDIAGHNDKVLSVDWNE--GGLIVSGGADNKLRIFKG 417 (423)
T ss_pred eccCC---------CcceeeccCCceEEEEeccC--CceEEeccCcceEEEecc
Confidence 99754 23444458999999999964 689999999999999864
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.4e-18 Score=101.80 Aligned_cols=130 Identities=18% Similarity=0.360 Sum_probs=91.2
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeE--EecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEec
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC--TLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKE 80 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~ 80 (138)
+|+++++|+.||.|.+||++....... .+......|+. .....|+-.|..+.|-|... .|.+++.|.++++||.
T Consensus 55 egrymlSGgadgsi~v~Dl~n~t~~e~---s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDt 131 (397)
T KOG4283|consen 55 EGRYMLSGGADGSIAVFDLQNATDYEA---SGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDT 131 (397)
T ss_pred cceEEeecCCCccEEEEEeccccchhh---ccceeheeeeccccCCccceeeeeeeEEeeecCceeecccccceEEEeec
Confidence 689999999999999999976542110 01111223321 11122778999999999665 8899999999999999
Q ss_pred cCCCCCC------------------------------ceeeee----eeeeeecccccceeEEEEccCCCCEEEEEeCCC
Q psy14817 81 NPEAGDS------------------------------DMVSFD----LVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG 126 (138)
Q Consensus 81 ~~~~~~~------------------------------~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 126 (138)
...+... .....+ ...+.+.+|+..|.++.|+|...-+|++|+.||
T Consensus 132 nTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg 211 (397)
T KOG4283|consen 132 NTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADG 211 (397)
T ss_pred ccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCc
Confidence 8765110 000000 023455689999999999998555789999999
Q ss_pred cEEEEEcCCC
Q psy14817 127 DVKLWQIKLE 136 (138)
Q Consensus 127 ~v~~wd~~~~ 136 (138)
.|++||+|..
T Consensus 212 ~irlWDiRra 221 (397)
T KOG4283|consen 212 AIRLWDIRRA 221 (397)
T ss_pred eEEEEEeecc
Confidence 9999999864
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.7e-17 Score=108.91 Aligned_cols=107 Identities=14% Similarity=0.268 Sum_probs=81.2
Q ss_pred CccCCCe-EEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSR-LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~-l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|++.. |++++.|++|+|||++... .+..+. |...|.++.|+++|.++++++.|+.|++||
T Consensus 133 f~P~g~~iLaSgS~DgtIrIWDl~tg~---------------~~~~i~--~~~~V~SlswspdG~lLat~s~D~~IrIwD 195 (568)
T PTZ00420 133 WNPMNYYIMCSSGFDSFVNIWDIENEK---------------RAFQIN--MPKKLSSLKWNIKGNLLSGTCVGKHMHIID 195 (568)
T ss_pred ECCCCCeEEEEEeCCCeEEEEECCCCc---------------EEEEEe--cCCcEEEEEECCCCCEEEEEecCCEEEEEE
Confidence 6788865 5799999999999986542 233343 456899999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeE-----EEEccCCCCEEEEEeCCC----cEEEEEcCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNC-----VAWNPVVPGMLASCSDDG----DVKLWQIKL 135 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~~l~~~~~d~----~v~~wd~~~ 135 (138)
++.+. ......+|.+.+.. ..|+++ +.++++++.|+ .|++||++.
T Consensus 196 ~Rsg~----------~i~tl~gH~g~~~s~~v~~~~fs~d-~~~IlTtG~d~~~~R~VkLWDlr~ 249 (568)
T PTZ00420 196 PRKQE----------IASSFHIHDGGKNTKNIWIDGLGGD-DNYILSTGFSKNNMREMKLWDLKN 249 (568)
T ss_pred CCCCc----------EEEEEecccCCceeEEEEeeeEcCC-CCEEEEEEcCCCCccEEEEEECCC
Confidence 99776 33334467654432 334577 88888888774 799999984
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.9e-18 Score=102.16 Aligned_cols=109 Identities=17% Similarity=0.375 Sum_probs=90.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~ 79 (138)
|.++++.+++++.|.+|+.||.+.. +++..+++ |..-|+.+.-+..|. ++.+++.|+++++||
T Consensus 98 ~~~d~s~i~S~gtDk~v~~wD~~tG---------------~~~rk~k~-h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D 161 (338)
T KOG0265|consen 98 GMRDGSHILSCGTDKTVRGWDAETG---------------KRIRKHKG-HTSFVNSLDPSRRGPQLVCSGSDDGTLKLWD 161 (338)
T ss_pred eccCCCEEEEecCCceEEEEecccc---------------eeeehhcc-ccceeeecCccccCCeEEEecCCCceEEEEe
Confidence 4678999999999999999997554 55788888 889999998666666 788899999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
++... ..... .....++++.|..+ +..+++|+-|+.|++||+|.+.
T Consensus 162 ~R~k~----------~~~t~-~~kyqltAv~f~d~-s~qv~sggIdn~ikvWd~r~~d 207 (338)
T KOG0265|consen 162 IRKKE----------AIKTF-ENKYQLTAVGFKDT-SDQVISGGIDNDIKVWDLRKND 207 (338)
T ss_pred ecccc----------hhhcc-ccceeEEEEEeccc-ccceeeccccCceeeeccccCc
Confidence 99765 22222 45678999999988 9999999999999999998654
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.2e-18 Score=112.65 Aligned_cols=104 Identities=14% Similarity=0.220 Sum_probs=88.6
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCC-CeEEEeeCCCcEEEEeccCC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~-~~~~s~~~d~~i~i~~~~~~ 83 (138)
.++|.++|-|.+||+|++. ...|+..|. |...|+||+|+|-. .+|++|+.|+.|+||++...
T Consensus 380 n~fLLSSSMDKTVRLWh~~---------------~~~CL~~F~--HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~ 442 (712)
T KOG0283|consen 380 NNFLLSSSMDKTVRLWHPG---------------RKECLKVFS--HNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDK 442 (712)
T ss_pred CCeeEeccccccEEeecCC---------------CcceeeEEe--cCCeeEEEEecccCCCcEeecccccceEEeecCcC
Confidence 5689999999999999963 336788875 89999999999955 59999999999999999876
Q ss_pred CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 84 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+ +.... .-..-|++++|.|+ |+..+.|+.+|.+++|+.+..+
T Consensus 443 ~----------Vv~W~-Dl~~lITAvcy~Pd-Gk~avIGt~~G~C~fY~t~~lk 484 (712)
T KOG0283|consen 443 K----------VVDWN-DLRDLITAVCYSPD-GKGAVIGTFNGYCRFYDTEGLK 484 (712)
T ss_pred e----------eEeeh-hhhhhheeEEeccC-CceEEEEEeccEEEEEEccCCe
Confidence 5 43333 44589999999999 9999999999999999987654
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.1e-18 Score=115.07 Aligned_cols=130 Identities=22% Similarity=0.385 Sum_probs=97.9
Q ss_pred CccCCCeEEEee--CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCS--DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s--~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~ 78 (138)
.+|+|..+|||+ .|+.++||+...-........ ....+.+.+... |.+.|+|++|+++|++|++|++|+.|.||
T Consensus 21 v~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~---~~l~k~l~~m~~-h~~sv~CVR~S~dG~~lAsGSDD~~v~iW 96 (942)
T KOG0973|consen 21 VHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKN---ENLPKHLCTMDD-HDGSVNCVRFSPDGSYLASGSDDRLVMIW 96 (942)
T ss_pred ecCCceeEecCCccccccceeeccccccchhhhhh---cccchhheeecc-ccCceeEEEECCCCCeEeeccCcceEEEe
Confidence 479999999999 999999999643322111000 111234555555 89999999999999999999999999999
Q ss_pred eccC-CC--------CCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENP-EA--------GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.... +. +..+...++. ...+.+|...|..++|+|+ ..++++++.|++|.+|+.++-
T Consensus 97 ~~~~~~~~~~fgs~g~~~~vE~wk~-~~~l~~H~~DV~Dv~Wsp~-~~~lvS~s~DnsViiwn~~tF 161 (942)
T KOG0973|consen 97 ERAEIGSGTVFGSTGGAKNVESWKV-VSILRGHDSDVLDVNWSPD-DSLLVSVSLDNSVIIWNAKTF 161 (942)
T ss_pred eecccCCcccccccccccccceeeE-EEEEecCCCccceeccCCC-ccEEEEecccceEEEEccccc
Confidence 8884 10 1122333443 3445689999999999998 999999999999999998763
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.4e-18 Score=111.08 Aligned_cols=111 Identities=20% Similarity=0.284 Sum_probs=88.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|||||++||+.|.||.+||||+..+.. +...+. .-+...|++|+|||++|++|+.|..|.||.+
T Consensus 298 FS~DG~~LA~VSqDGfLRvF~fdt~eL---------------lg~mkS-YFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf 361 (636)
T KOG2394|consen 298 FSPDGKYLATVSQDGFLRIFDFDTQEL---------------LGVMKS-YFGGLLCVCWSPDGKYIVTGGEDDLVTVWSF 361 (636)
T ss_pred EcCCCceEEEEecCceEEEeeccHHHH---------------HHHHHh-hccceEEEEEcCCccEEEecCCcceEEEEEe
Confidence 789999999999999999999754422 333333 4567899999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccC----------------------------------C-----------
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV----------------------------------V----------- 115 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----------------------------------~----------- 115 (138)
.... +...-.+|..+|+.++|.|= +
T Consensus 362 ~erR----------VVARGqGHkSWVs~VaFDpytt~~ee~~~~~~~~~~~~~~~~~~~~r~~~~~S~~~~~~s~~~~~~ 431 (636)
T KOG2394|consen 362 EERR----------VVARGQGHKSWVSVVAFDPYTTSTEEWNNFSGMDSTFSDVAHDFEIRANGTGSAEGCPLSSFNRIN 431 (636)
T ss_pred ccce----------EEEeccccccceeeEeecccccccccccccccccccccchhcccccccCCCCCcCCCccccccccc
Confidence 8776 45555688899999988720 0
Q ss_pred --CCEEEEEeCCCcEEEEEcCCCC
Q psy14817 116 --PGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 116 --~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
...|.+++.|.++.+||+....
T Consensus 432 ~v~YRfGSVGqDTqlcLWDlteD~ 455 (636)
T KOG2394|consen 432 SVTYRFGSVGQDTQLCLWDLTEDV 455 (636)
T ss_pred ceEEEeecccccceEEEEecchhh
Confidence 1246788999999999987543
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.2e-17 Score=108.75 Aligned_cols=126 Identities=24% Similarity=0.432 Sum_probs=94.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCC------------------CCCCc--------eE-EeEEecCCCccC
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTP------------------DNDSV--------WK-CVCTLSGHHGRT 53 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~------------------~~~~~--------~~-~~~~~~~~~~~~ 53 (138)
|+++|++||.|..+|.|.|||............. ..... .+ ....+.+ |...
T Consensus 225 ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~~~~lssGsr~~~I~~~dvR~~~~~~~~~~~-H~qe 303 (484)
T KOG0305|consen 225 WSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWNSSVLSSGSRDGKILNHDVRISQHVVSTLQG-HRQE 303 (484)
T ss_pred ECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEeccCceEEEecCCCcEEEEEEecchhhhhhhhc-ccce
Confidence 5789999999999999999996544322211110 00000 00 0112344 8899
Q ss_pred eEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe--CCCcEEEE
Q psy14817 54 IYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS--DDGDVKLW 131 (138)
Q Consensus 54 v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d~~v~~w 131 (138)
|..+.|++++.++++|+.|+.+.|||..... .......|...|.+++|+|-...+|++|+ .|+.|++|
T Consensus 304 VCgLkws~d~~~lASGgnDN~~~Iwd~~~~~----------p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fw 373 (484)
T KOG0305|consen 304 VCGLKWSPDGNQLASGGNDNVVFIWDGLSPE----------PKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFW 373 (484)
T ss_pred eeeeEECCCCCeeccCCCccceEeccCCCcc----------ccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEE
Confidence 9999999999999999999999999995544 34444589999999999998788999886 59999999
Q ss_pred EcCCCC
Q psy14817 132 QIKLEN 137 (138)
Q Consensus 132 d~~~~~ 137 (138)
|..++.
T Consensus 374 n~~~g~ 379 (484)
T KOG0305|consen 374 NTNTGA 379 (484)
T ss_pred EcCCCc
Confidence 998765
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.8e-17 Score=99.26 Aligned_cols=109 Identities=27% Similarity=0.422 Sum_probs=90.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++++.|+.+++|++.... ....+.. |...+..+.|.+++..+++++.++.+++|++
T Consensus 17 ~~~~~~~l~~~~~~g~i~i~~~~~~~---------------~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~ 80 (289)
T cd00200 17 FSPDGKLLATGSGDGTIKVWDLETGE---------------LLRTLKG-HTGPVRDVAASADGTYLASGSSDKTIRLWDL 80 (289)
T ss_pred EcCCCCEEEEeecCcEEEEEEeeCCC---------------cEEEEec-CCcceeEEEECCCCCEEEEEcCCCeEEEEEc
Confidence 57899999999999999999975432 2455556 7788889999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.... .......|...+.++.|+++ +.++++++.|+.+.+||++++
T Consensus 81 ~~~~----------~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~ 125 (289)
T cd00200 81 ETGE----------CVRTLTGHTSYVSSVAFSPD-GRILSSSSRDKTIKVWDVETG 125 (289)
T ss_pred Cccc----------ceEEEeccCCcEEEEEEcCC-CCEEEEecCCCeEEEEECCCc
Confidence 8654 23333467779999999998 888888888999999999754
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.2e-16 Score=98.64 Aligned_cols=110 Identities=28% Similarity=0.526 Sum_probs=89.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|+++++++++.|+.|++|++... +.+..+.. |...+.++.|++++.++++++.++.+.+|++
T Consensus 59 ~~~~~~~l~~~~~~~~i~i~~~~~~---------------~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~ 122 (289)
T cd00200 59 ASADGTYLASGSSDKTIRLWDLETG---------------ECVRTLTG-HTSYVSSVAFSPDGRILSSSSRDKTIKVWDV 122 (289)
T ss_pred ECCCCCEEEEEcCCCeEEEEEcCcc---------------cceEEEec-cCCcEEEEEEcCCCCEEEEecCCCeEEEEEC
Confidence 4678889999999999999998543 22455556 7778999999999888888888999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.... .......|...+.++.|+|+ +.++++++.|+.+++||++.++
T Consensus 123 ~~~~----------~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~~i~i~d~~~~~ 168 (289)
T cd00200 123 ETGK----------CLTTLRGHTDWVNSVAFSPD-GTFVASSSQDGTIKLWDLRTGK 168 (289)
T ss_pred CCcE----------EEEEeccCCCcEEEEEEcCc-CCEEEEEcCCCcEEEEEccccc
Confidence 8544 23333467889999999998 8888888889999999998654
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.4e-17 Score=99.86 Aligned_cols=113 Identities=29% Similarity=0.423 Sum_probs=91.4
Q ss_pred eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCC
Q psy14817 7 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 86 (138)
Q Consensus 7 ~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~ 86 (138)
.|.+|++||.|.+|+ ...|.++..++. |.+.|+.++.+|.+++.++.+.|+.+++|++-.+...
T Consensus 99 hLlS~sdDG~i~iw~---------------~~~W~~~~slK~-H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a 162 (362)
T KOG0294|consen 99 HLLSGSDDGHIIIWR---------------VGSWELLKSLKA-HKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVA 162 (362)
T ss_pred heeeecCCCcEEEEE---------------cCCeEEeeeecc-cccccceeEecCCCceEEEEcCCceeeeehhhcCccc
Confidence 799999999999999 567889999999 8999999999999999999999999999999877500
Q ss_pred -----------------Cc-----------------------------------------------ee--ee----eeee
Q psy14817 87 -----------------SD-----------------------------------------------MV--SF----DLVH 96 (138)
Q Consensus 87 -----------------~~-----------------------------------------------~~--~~----~~~~ 96 (138)
.. .. .+ ..+.
T Consensus 163 ~v~~L~~~at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds~~~~ 242 (362)
T KOG0294|consen 163 FVLNLKNKATLVSWSPQGDHFVVSGRNKIDIYQLDNASVFREIENPKRILCATFLDGSELLVGGDNEWISLKDTDSDTPL 242 (362)
T ss_pred eeeccCCcceeeEEcCCCCEEEEEeccEEEEEecccHhHhhhhhccccceeeeecCCceEEEecCCceEEEeccCCCccc
Confidence 00 00 00 1123
Q ss_pred eeecccccceeEEEE--ccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 97 TEHRAHNQDVNCVAW--NPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 97 ~~~~~~~~~v~~~~~--~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
..+.+|..+|.++.+ .|+ +.+|++++.||.|++||+++.
T Consensus 243 ~~~~AH~~RVK~i~~~~~~~-~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 243 TEFLAHENRVKDIASYTNPE-HEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred eeeecchhheeeeEEEecCC-ceEEEEeccCceEEEEEcccc
Confidence 445688999999873 345 789999999999999999875
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.2e-17 Score=95.60 Aligned_cols=108 Identities=21% Similarity=0.341 Sum_probs=90.8
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC------CCccCeEEEEEecCCCeEEEeeCCCcE
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG------HHGRTIYDISWCHLTDLIATACGDDAI 75 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~v~~~~~~~~~~s~~~d~~i 75 (138)
+.+|-.|++|+.|.+||+||++.+.. +.++.. -....|.+++..|.|+++++|..|.++
T Consensus 191 swn~~m~~sgsqdktirfwdlrv~~~---------------v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc 255 (350)
T KOG0641|consen 191 SWNGAMFASGSQDKTIRFWDLRVNSC---------------VNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSC 255 (350)
T ss_pred EecCcEEEccCCCceEEEEeeeccce---------------eeeccCcccCCCcccceeEEEEECCCcceeeeccCCCce
Confidence 45778899999999999999976533 332221 013578999999999999999999999
Q ss_pred EEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
.+||++.+. ....+..|...|.+++|+|. ..++++++.|.+|++-|++.
T Consensus 256 ~lydirg~r----------~iq~f~phsadir~vrfsp~-a~yllt~syd~~ikltdlqg 304 (350)
T KOG0641|consen 256 MLYDIRGGR----------MIQRFHPHSADIRCVRFSPG-AHYLLTCSYDMKIKLTDLQG 304 (350)
T ss_pred EEEEeeCCc----------eeeeeCCCccceeEEEeCCC-ceEEEEecccceEEEeeccc
Confidence 999999887 45556689999999999999 99999999999999999874
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.3e-18 Score=105.86 Aligned_cols=102 Identities=20% Similarity=0.482 Sum_probs=87.9
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
|...+++|..|.+|+|||. ....++..+.+ |.+.|.|+.|. ...+++|+.|.+|++||...+
T Consensus 206 DD~kiVSGlrDnTikiWD~---------------n~~~c~~~L~G-HtGSVLCLqyd--~rviisGSSDsTvrvWDv~tg 267 (499)
T KOG0281|consen 206 DDEKIVSGLRDNTIKIWDK---------------NSLECLKILTG-HTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTG 267 (499)
T ss_pred cchhhhcccccCceEEecc---------------ccHHHHHhhhc-CCCcEEeeecc--ceEEEecCCCceEEEEeccCC
Confidence 5677999999999999994 34466788889 99999999985 559999999999999999998
Q ss_pred CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 84 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+ ....+-.|...|..+.|+ ..++++++.|.++.+||+..+
T Consensus 268 e----------~l~tlihHceaVLhlrf~---ng~mvtcSkDrsiaVWdm~sp 307 (499)
T KOG0281|consen 268 E----------PLNTLIHHCEAVLHLRFS---NGYMVTCSKDRSIAVWDMASP 307 (499)
T ss_pred c----------hhhHHhhhcceeEEEEEe---CCEEEEecCCceeEEEeccCc
Confidence 8 555555899999999995 569999999999999998764
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.8e-17 Score=96.50 Aligned_cols=119 Identities=14% Similarity=0.309 Sum_probs=94.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+.+|.+|.+|+.|.+..+|...+ .+.+.++.+ |.+.|+|+..+.+...+++|+.|.++++||.
T Consensus 18 yN~eGDLlFscaKD~~~~vw~s~n---------------GerlGty~G-HtGavW~~Did~~s~~liTGSAD~t~kLWDv 81 (327)
T KOG0643|consen 18 YNREGDLLFSCAKDSTPTVWYSLN---------------GERLGTYDG-HTGAVWCCDIDWDSKHLITGSADQTAKLWDV 81 (327)
T ss_pred ecCCCcEEEEecCCCCceEEEecC---------------CceeeeecC-CCceEEEEEecCCcceeeeccccceeEEEEc
Confidence 467899999999999999999533 355899999 9999999999999999999999999999999
Q ss_pred cCCCCCC--------------------------------------------ceeeeeeeeeeecccccceeEEEEccCCC
Q psy14817 81 NPEAGDS--------------------------------------------DMVSFDLVHTEHRAHNQDVNCVAWNPVVP 116 (138)
Q Consensus 81 ~~~~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 116 (138)
..++... ......+... ...+...++.+-|.|- +
T Consensus 82 ~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~k-I~t~~skit~a~Wg~l-~ 159 (327)
T KOG0643|consen 82 ETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLK-IPTPDSKITSALWGPL-G 159 (327)
T ss_pred CCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEE-ecCCccceeeeeeccc-C
Confidence 9886000 0000000111 1234578888999999 9
Q ss_pred CEEEEEeCCCcEEEEEcCCCC
Q psy14817 117 GMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 117 ~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..|++|..||.|..||+++++
T Consensus 160 ~~ii~Ghe~G~is~~da~~g~ 180 (327)
T KOG0643|consen 160 ETIIAGHEDGSISIYDARTGK 180 (327)
T ss_pred CEEEEecCCCcEEEEEcccCc
Confidence 999999999999999999863
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.5e-18 Score=115.24 Aligned_cols=111 Identities=23% Similarity=0.402 Sum_probs=96.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+++..+|++|+.+|+|++||+... +.++++.+ |...+..+.|+|-+.++++|+.|..+.+||+
T Consensus 78 f~~~E~LlaagsasgtiK~wDleeA---------------k~vrtLtg-h~~~~~sv~f~P~~~~~a~gStdtd~~iwD~ 141 (825)
T KOG0267|consen 78 FDTSERLLAAGSASGTIKVWDLEEA---------------KIVRTLTG-HLLNITSVDFHPYGEFFASGSTDTDLKIWDI 141 (825)
T ss_pred cCcchhhhcccccCCceeeeehhhh---------------hhhhhhhc-cccCcceeeeccceEEeccccccccceehhh
Confidence 4566778999999999999998643 23678888 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 138 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~ 138 (138)
+... +......|...+..++|+|+ +.+++.++.|..+++||+..+++
T Consensus 142 Rk~G----------c~~~~~s~~~vv~~l~lsP~-Gr~v~~g~ed~tvki~d~~agk~ 188 (825)
T KOG0267|consen 142 RKKG----------CSHTYKSHTRVVDVLRLSPD-GRWVASGGEDNTVKIWDLTAGKL 188 (825)
T ss_pred hccC----------ceeeecCCcceeEEEeecCC-CceeeccCCcceeeeeccccccc
Confidence 9655 45555678899999999999 99999999999999999987764
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.6e-16 Score=98.46 Aligned_cols=108 Identities=23% Similarity=0.357 Sum_probs=92.4
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
+|+.+++|||+.|..-.+|++.... .+..+.+ |+..|+++.|+.+|.++++|..+|.|+||...
T Consensus 73 ~P~~~l~aTGGgDD~AflW~~~~ge---------------~~~eltg-HKDSVt~~~FshdgtlLATGdmsG~v~v~~~s 136 (399)
T KOG0296|consen 73 HPNNNLVATGGGDDLAFLWDISTGE---------------FAGELTG-HKDSVTCCSFSHDGTLLATGDMSGKVLVFKVS 136 (399)
T ss_pred CCCCceEEecCCCceEEEEEccCCc---------------ceeEecC-CCCceEEEEEccCceEEEecCCCccEEEEEcc
Confidence 6889999999999999999975543 3677888 99999999999999999999999999999998
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.+. ...........+--+.|+|. ..+|+.|+.||.+-+|.+..+
T Consensus 137 tg~----------~~~~~~~e~~dieWl~WHp~-a~illAG~~DGsvWmw~ip~~ 180 (399)
T KOG0296|consen 137 TGG----------EQWKLDQEVEDIEWLKWHPR-AHILLAGSTDGSVWMWQIPSQ 180 (399)
T ss_pred cCc----------eEEEeecccCceEEEEeccc-ccEEEeecCCCcEEEEECCCc
Confidence 776 22222244567777999998 999999999999999999774
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.8e-17 Score=109.75 Aligned_cols=107 Identities=26% Similarity=0.389 Sum_probs=96.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
+||||++||.+--|.+|+||-+.. .+....+.+ |.-+|.|+..+|++..+++|+.|..|++|.+
T Consensus 516 ~Spdgk~LaVsLLdnTVkVyflDt---------------lKFflsLYG-HkLPV~smDIS~DSklivTgSADKnVKiWGL 579 (888)
T KOG0306|consen 516 VSPDGKLLAVSLLDNTVKVYFLDT---------------LKFFLSLYG-HKLPVLSMDISPDSKLIVTGSADKNVKIWGL 579 (888)
T ss_pred EcCCCcEEEEEeccCeEEEEEecc---------------eeeeeeecc-cccceeEEeccCCcCeEEeccCCCceEEecc
Confidence 589999999999999999999643 355778889 9999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
+-+. +...+.+|...|.++.|.|. ...+.+++.|+.|+-||-.
T Consensus 580 dFGD----------CHKS~fAHdDSvm~V~F~P~-~~~FFt~gKD~kvKqWDg~ 622 (888)
T KOG0306|consen 580 DFGD----------CHKSFFAHDDSVMSVQFLPK-THLFFTCGKDGKVKQWDGE 622 (888)
T ss_pred ccch----------hhhhhhcccCceeEEEEccc-ceeEEEecCcceEEeechh
Confidence 9887 56666699999999999998 9999999999999999853
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.7e-17 Score=107.62 Aligned_cols=118 Identities=18% Similarity=0.282 Sum_probs=93.3
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEec-CCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
++..++|+|+-|+.|.+||+......... ..+......+. + ++..|.+++.++.+..+++|+.++-+++||.+
T Consensus 128 k~~~lvaSgGLD~~IflWDin~~~~~l~~-----s~n~~t~~sl~sG-~k~siYSLA~N~t~t~ivsGgtek~lr~wDpr 201 (735)
T KOG0308|consen 128 KNNELVASGGLDRKIFLWDINTGTATLVA-----SFNNVTVNSLGSG-PKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPR 201 (735)
T ss_pred cCceeEEecCCCccEEEEEccCcchhhhh-----hccccccccCCCC-CccceeeeecCCcceEEEecCcccceEEeccc
Confidence 46789999999999999998754220000 00111122233 5 78899999999999999999999999999999
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
... ....+.+|+..|..+..+++ +..+++++.||+|++||+++++
T Consensus 202 t~~----------kimkLrGHTdNVr~ll~~dD-Gt~~ls~sSDgtIrlWdLgqQr 246 (735)
T KOG0308|consen 202 TCK----------KIMKLRGHTDNVRVLLVNDD-GTRLLSASSDGTIRLWDLGQQR 246 (735)
T ss_pred ccc----------ceeeeeccccceEEEEEcCC-CCeEeecCCCceEEeeeccccc
Confidence 876 33344599999999999999 9999999999999999998764
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.5e-16 Score=94.81 Aligned_cols=122 Identities=26% Similarity=0.484 Sum_probs=95.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec--CCCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH--LTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~s~~~d~~i~i~ 78 (138)
|.+-|+.+|||+.|++|+|||.... ..+|.+....+. |.+.|..|.|.+ .|+.+++++.|+++.||
T Consensus 21 ~D~~GRRmAtCSsDq~vkI~d~~~~-----------s~~W~~Ts~Wra-h~~Si~rV~WAhPEfGqvvA~cS~Drtv~iW 88 (361)
T KOG2445|consen 21 FDFYGRRMATCSSDQTVKIWDSTSD-----------SGTWSCTSSWRA-HDGSIWRVVWAHPEFGQVVATCSYDRTVSIW 88 (361)
T ss_pred ecccCceeeeccCCCcEEEEeccCC-----------CCceEEeeeEEe-cCCcEEEEEecCccccceEEEEecCCceeee
Confidence 4567999999999999999997443 567888888888 899999999976 45799999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCC-CCEEEEEeCCCcEEEEEcCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV-PGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~d~~v~~wd~~~ 135 (138)
.-...........+.. ...+...+..|+.++|.|.. +-.+++++.||.+|||+.-.
T Consensus 89 EE~~~~~~~~~~~Wv~-~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~d 145 (361)
T KOG2445|consen 89 EEQEKSEEAHGRRWVR-RTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPD 145 (361)
T ss_pred eecccccccccceeEE-EEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCC
Confidence 8754432333333332 33344677899999999963 44789999999999998643
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=7.9e-17 Score=95.08 Aligned_cols=120 Identities=15% Similarity=0.278 Sum_probs=85.6
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
+.|...|++|+.|..+.+||... .+.+..+.+ |.+.|+.++|+.+...+++|+.|.++++||-+
T Consensus 68 s~Dnskf~s~GgDk~v~vwDV~T---------------Gkv~Rr~rg-H~aqVNtV~fNeesSVv~SgsfD~s~r~wDCR 131 (307)
T KOG0316|consen 68 SSDNSKFASCGGDKAVQVWDVNT---------------GKVDRRFRG-HLAQVNTVRFNEESSVVASGSFDSSVRLWDCR 131 (307)
T ss_pred cccccccccCCCCceEEEEEccc---------------Ceeeeeccc-ccceeeEEEecCcceEEEeccccceeEEEEcc
Confidence 45677899999999999999644 366889999 99999999999999999999999999999998
Q ss_pred CCCCCCce----------------------------eeeeeeee--eecccccceeEEEEccCCCCEEEEEeCCCcEEEE
Q psy14817 82 PEAGDSDM----------------------------VSFDLVHT--EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 131 (138)
Q Consensus 82 ~~~~~~~~----------------------------~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~w 131 (138)
..+..+-+ ........ ....-..+|++++|+++ ++..+.++.|+++++.
T Consensus 132 S~s~ePiQildea~D~V~Si~v~~heIvaGS~DGtvRtydiR~G~l~sDy~g~pit~vs~s~d-~nc~La~~l~stlrLl 210 (307)
T KOG0316|consen 132 SRSFEPIQILDEAKDGVSSIDVAEHEIVAGSVDGTVRTYDIRKGTLSSDYFGHPITSVSFSKD-GNCSLASSLDSTLRLL 210 (307)
T ss_pred cCCCCccchhhhhcCceeEEEecccEEEeeccCCcEEEEEeecceeehhhcCCcceeEEecCC-CCEEEEeeccceeeec
Confidence 76521100 00010000 00112346777777777 7777777777777777
Q ss_pred EcCCCCC
Q psy14817 132 QIKLENL 138 (138)
Q Consensus 132 d~~~~~~ 138 (138)
|-.+++|
T Consensus 211 Dk~tGkl 217 (307)
T KOG0316|consen 211 DKETGKL 217 (307)
T ss_pred ccchhHH
Confidence 7666553
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.6e-17 Score=99.08 Aligned_cols=133 Identities=20% Similarity=0.284 Sum_probs=86.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCC----ccCCCCC--------------------Cce---EEeE---------
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAG----IPTPDND--------------------SVW---KCVC--------- 44 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~----~~~~~~~--------------------~~~---~~~~--------- 44 (138)
||.||++|||++.|++|++|+++.-...+. ++.+... ... +..+
T Consensus 94 FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk~~K~~dG~~~~~ 173 (420)
T KOG2096|consen 94 FSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYKLVKKTDGSGSHH 173 (420)
T ss_pred EcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEEEeeecccCCCCcc
Confidence 789999999999999999999754322111 0000000 000 0000
Q ss_pred -------EecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCC-----------------CC----------Ccee
Q psy14817 45 -------TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA-----------------GD----------SDMV 90 (138)
Q Consensus 45 -------~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~-----------------~~----------~~~~ 90 (138)
.+...|+..+..+-....+.+|++++.|..|.+|+++... +. .+..
T Consensus 174 ~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lkGq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVk 253 (420)
T KOG2096|consen 174 FVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLKGQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVK 253 (420)
T ss_pred cccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecCCceeeeeccccccccceeeCCCCcEEEEecCCCCce
Confidence 0111145566666666667799999999999999988321 00 0001
Q ss_pred eeee------------eeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 91 SFDL------------VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 91 ~~~~------------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
.+.. ..-.+++|...|..++|+++ ...+++++.||+.++||.+
T Consensus 254 VwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~-S~r~vtvSkDG~wriwdtd 308 (420)
T KOG2096|consen 254 VWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNS-STRAVTVSKDGKWRIWDTD 308 (420)
T ss_pred EEEEEeccCcchhhhhhhheeccchhheeeeeeCCC-cceeEEEecCCcEEEeecc
Confidence 1111 12244689999999999999 9999999999999999974
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.9e-18 Score=112.79 Aligned_cols=108 Identities=23% Similarity=0.438 Sum_probs=97.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|-+.++|+|+.|+-+++||.+.. .|.+.+.+ |...+..++|.|+|.++++++.|.+++|||.
T Consensus 120 f~P~~~~~a~gStdtd~~iwD~Rk~---------------Gc~~~~~s-~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~ 183 (825)
T KOG0267|consen 120 FHPYGEFFASGSTDTDLKIWDIRKK---------------GCSHTYKS-HTRVVDVLRLSPDGRWVASGGEDNTVKIWDL 183 (825)
T ss_pred eccceEEeccccccccceehhhhcc---------------CceeeecC-CcceeEEEeecCCCceeeccCCcceeeeecc
Confidence 7899999999999999999998655 44788888 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
..++ ....+..|...+..+.|+|. .-.+++|+.|+++++||+++
T Consensus 184 ~agk----------~~~ef~~~e~~v~sle~hp~-e~Lla~Gs~d~tv~f~dlet 227 (825)
T KOG0267|consen 184 TAGK----------LSKEFKSHEGKVQSLEFHPL-EVLLAPGSSDRTVRFWDLET 227 (825)
T ss_pred cccc----------cccccccccccccccccCch-hhhhccCCCCceeeeeccce
Confidence 9887 56666789999999999998 88899999999999999984
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.5e-17 Score=101.03 Aligned_cols=78 Identities=31% Similarity=0.631 Sum_probs=66.0
Q ss_pred CccCeEEEEEecCCC-eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcE
Q psy14817 50 HGRTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 128 (138)
Q Consensus 50 ~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v 128 (138)
|...|-.++|+|... .|++|+-|++|+|||++.+... .....++|...|+.+.|+.. ..+|++|+.||++
T Consensus 256 H~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~--------~~~~~kAh~sDVNVISWnr~-~~lLasG~DdGt~ 326 (440)
T KOG0302|consen 256 HTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKK--------AAVSTKAHNSDVNVISWNRR-EPLLASGGDDGTL 326 (440)
T ss_pred cccchhhhccCCccCceEEeeecCceEEEEEecCCCcc--------ceeEeeccCCceeeEEccCC-cceeeecCCCceE
Confidence 788899999999876 9999999999999999976410 12223689999999999998 6699999999999
Q ss_pred EEEEcCCC
Q psy14817 129 KLWQIKLE 136 (138)
Q Consensus 129 ~~wd~~~~ 136 (138)
+|||+|+=
T Consensus 327 ~iwDLR~~ 334 (440)
T KOG0302|consen 327 SIWDLRQF 334 (440)
T ss_pred EEEEhhhc
Confidence 99999864
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.7e-17 Score=98.46 Aligned_cols=109 Identities=21% Similarity=0.325 Sum_probs=90.5
Q ss_pred Ccc--CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEE
Q psy14817 1 MIQ--TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~--~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i 77 (138)
||| +|+.+++. .|+++..||++.+.. ...+...|...|..+.|+|..+ +|+++++||.|++
T Consensus 178 WspHHdgnqv~tt-~d~tl~~~D~RT~~~---------------~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvri 241 (370)
T KOG1007|consen 178 WSPHHDGNQVATT-SDSTLQFWDLRTMKK---------------NNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRI 241 (370)
T ss_pred cCCCCccceEEEe-CCCcEEEEEccchhh---------------hcchhhhhcceeeeccCCCCceEEEEEcCCCccEEE
Confidence 455 78888876 479999999886644 4556666888999999999987 8899999999999
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
||.+..+ .....+.+|...|++++|+|...+++++++.|..|.+|...
T Consensus 242 WD~R~tk---------~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~ 289 (370)
T KOG1007|consen 242 WDTRKTK---------FPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCAS 289 (370)
T ss_pred EeccCCC---------ccccccCCCceEEEEEEecCccceEEEecCCCceeEEEecc
Confidence 9999765 34455568999999999999977788999999999999653
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.5e-16 Score=100.53 Aligned_cols=108 Identities=23% Similarity=0.319 Sum_probs=87.5
Q ss_pred CccC-CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEE
Q psy14817 1 MIQT-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~-~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~ 78 (138)
|+|+ +..|++|++|+.+++||+... .....+.+ |+..|.|.+|+|... .+++|+.||+|++|
T Consensus 118 f~~~d~t~l~s~sDd~v~k~~d~s~a---------------~v~~~l~~-htDYVR~g~~~~~~~hivvtGsYDg~vrl~ 181 (487)
T KOG0310|consen 118 FSPQDNTMLVSGSDDKVVKYWDLSTA---------------YVQAELSG-HTDYVRCGDISPANDHIVVTGSYDGKVRLW 181 (487)
T ss_pred ecccCCeEEEecCCCceEEEEEcCCc---------------EEEEEecC-CcceeEeeccccCCCeEEEecCCCceEEEE
Confidence 5664 568889999999999997432 22567888 999999999999877 89999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|.+... ..... ..|..+|-.+.+.|. +..+++++.. .|++||+-++
T Consensus 182 DtR~~~---------~~v~e-lnhg~pVe~vl~lps-gs~iasAgGn-~vkVWDl~~G 227 (487)
T KOG0310|consen 182 DTRSLT---------SRVVE-LNHGCPVESVLALPS-GSLIASAGGN-SVKVWDLTTG 227 (487)
T ss_pred EeccCC---------ceeEE-ecCCCceeeEEEcCC-CCEEEEcCCC-eEEEEEecCC
Confidence 999763 12222 378899999999998 8999988854 7999998744
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.8e-17 Score=103.93 Aligned_cols=128 Identities=20% Similarity=0.266 Sum_probs=89.0
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCC------------ccCCCCCCceEEeE-------------------------
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAG------------IPTPDNDSVWKCVC------------------------- 44 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~------------~~~~~~~~~~~~~~------------------------- 44 (138)
-|.|-.|++||.|-.|++||+..+..... +.......+...+.
T Consensus 176 Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~KGD 255 (641)
T KOG0772|consen 176 DPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLDRDGFEIVEFSKGD 255 (641)
T ss_pred cCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEEccCCceeeeeeccc
Confidence 47899999999999999999876543221 00000000111111
Q ss_pred -------EecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCC
Q psy14817 45 -------TLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP 116 (138)
Q Consensus 45 -------~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 116 (138)
.-++ |...++|.+|+|... .|++++.|+++++|++..... ....++ .....+.+-.++.++|+++ +
T Consensus 256 QYI~Dm~nTKG-Hia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~--q~qVik--~k~~~g~Rv~~tsC~~nrd-g 329 (641)
T KOG0772|consen 256 QYIRDMYNTKG-HIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKS--QLQVIK--TKPAGGKRVPVTSCAWNRD-G 329 (641)
T ss_pred hhhhhhhccCC-ceeeeeccccccCcccceEEecCCCcEEEEecCCchh--heeEEe--eccCCCcccCceeeecCCC-c
Confidence 1123 788899999999986 899999999999999986541 111111 1112244568899999999 9
Q ss_pred CEEEEEeCCCcEEEEEcCC
Q psy14817 117 GMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 117 ~~l~~~~~d~~v~~wd~~~ 135 (138)
..+++|+.||+|.+|+.+.
T Consensus 330 ~~iAagc~DGSIQ~W~~~~ 348 (641)
T KOG0772|consen 330 KLIAAGCLDGSIQIWDKGS 348 (641)
T ss_pred chhhhcccCCceeeeecCC
Confidence 9999999999999999754
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=4e-17 Score=99.79 Aligned_cols=127 Identities=23% Similarity=0.355 Sum_probs=92.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCc---------------cC--------------CCCCCceEEeEEe--cCC
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGI---------------PT--------------PDNDSVWKCVCTL--SGH 49 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~---------------~~--------------~~~~~~~~~~~~~--~~~ 49 (138)
|+|....|++|+.|++|++||+......... +. .-+..+.+|.... ..+
T Consensus 180 FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~q 259 (430)
T KOG0640|consen 180 FHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQ 259 (430)
T ss_pred ecchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccc
Confidence 7899999999999999999997544211100 00 0111222332211 112
Q ss_pred CccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccc-cceeEEEEccCCCCEEEEEeCCCcE
Q psy14817 50 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHN-QDVNCVAWNPVVPGMLASCSDDGDV 128 (138)
Q Consensus 50 ~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~d~~v 128 (138)
|.+.|++|.+++.+.+.++++.||.|++||=-... ++..+..+|. ..|.+..|..+ +.++++.+.|..+
T Consensus 260 ht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~r---------Cv~t~~~AH~gsevcSa~Ftkn-~kyiLsSG~DS~v 329 (430)
T KOG0640|consen 260 HTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNR---------CVRTIGNAHGGSEVCSAVFTKN-GKYILSSGKDSTV 329 (430)
T ss_pred cccceeEEEecCCccEEEEeccCCcEEeeccccHH---------HHHHHHhhcCCceeeeEEEccC-CeEEeecCCccee
Confidence 88999999999999999999999999999865544 3344445665 47888899998 9999999999999
Q ss_pred EEEEcCCCC
Q psy14817 129 KLWQIKLEN 137 (138)
Q Consensus 129 ~~wd~~~~~ 137 (138)
++|.+.+++
T Consensus 330 kLWEi~t~R 338 (430)
T KOG0640|consen 330 KLWEISTGR 338 (430)
T ss_pred eeeeecCCc
Confidence 999998775
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.5e-17 Score=105.05 Aligned_cols=121 Identities=21% Similarity=0.350 Sum_probs=92.2
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCC------ceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEE
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDS------VWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIR 76 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~ 76 (138)
-|+++|.|+-|..|.|||+.-.....+.-..+... ..+.-..-.+ |+..|.++.|+..-. .|++|+.|.+|+
T Consensus 191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~g-HTdavl~Ls~n~~~~nVLaSgsaD~TV~ 269 (463)
T KOG0270|consen 191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASG-HTDAVLALSWNRNFRNVLASGSADKTVK 269 (463)
T ss_pred CcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhccccccccc-chHHHHHHHhccccceeEEecCCCceEE
Confidence 36899999999999999985443332211111000 0010111223 788899999998776 899999999999
Q ss_pred EEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 77 IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
+||+..+. +......|...|.++.|+|..+.+|++|+.|++|++.|+|.
T Consensus 270 lWD~~~g~----------p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~ 318 (463)
T KOG0270|consen 270 LWDVDTGK----------PKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRD 318 (463)
T ss_pred EEEcCCCC----------cceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccC
Confidence 99999988 55556678999999999999899999999999999999994
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.4e-16 Score=95.14 Aligned_cols=125 Identities=14% Similarity=0.108 Sum_probs=100.0
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCcc-------------------CCC-------CCCceEEeEEecCCCccCe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIP-------------------TPD-------NDSVWKCVCTLSGHHGRTI 54 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~-------------------~~~-------~~~~~~~~~~~~~~~~~~v 54 (138)
|+|+|++++.++.|..|...|.+.-......+ ..+ .-+..+++..+.. |....
T Consensus 114 wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~A-H~snC 192 (313)
T KOG1407|consen 114 WSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKA-HPSNC 192 (313)
T ss_pred EcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceEEEEecccccccccccc-CCcce
Confidence 68999999999999999999976543221100 000 1124467777887 88889
Q ss_pred EEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 55 YDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 55 ~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
.||.|+|+|++|++|+.|-.+.+||+...- +.+....+.-+|+.+.|+.+ +++|++++.|..|-|=+..
T Consensus 193 icI~f~p~GryfA~GsADAlvSLWD~~ELi----------C~R~isRldwpVRTlSFS~d-g~~lASaSEDh~IDIA~ve 261 (313)
T KOG1407|consen 193 ICIEFDPDGRYFATGSADALVSLWDVDELI----------CERCISRLDWPVRTLSFSHD-GRMLASASEDHFIDIAEVE 261 (313)
T ss_pred EEEEECCCCceEeeccccceeeccChhHhh----------hheeeccccCceEEEEeccC-cceeeccCccceEEeEecc
Confidence 999999999999999999999999999765 55556678899999999999 9999999999999887776
Q ss_pred CCC
Q psy14817 135 LEN 137 (138)
Q Consensus 135 ~~~ 137 (138)
++.
T Consensus 262 tGd 264 (313)
T KOG1407|consen 262 TGD 264 (313)
T ss_pred cCC
Confidence 653
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.6e-16 Score=93.77 Aligned_cols=110 Identities=21% Similarity=0.349 Sum_probs=91.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC--CCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG--DDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--d~~i~i~ 78 (138)
|+++|.+++++++|.++++||.... +.+.++.. ++..+..++|......++.++. |.+|+..
T Consensus 22 fs~~G~~litss~dDsl~LYd~~~g---------------~~~~ti~s-kkyG~~~~~Fth~~~~~i~sStk~d~tIryL 85 (311)
T KOG1446|consen 22 FSDDGLLLITSSEDDSLRLYDSLSG---------------KQVKTINS-KKYGVDLACFTHHSNTVIHSSTKEDDTIRYL 85 (311)
T ss_pred ecCCCCEEEEecCCCeEEEEEcCCC---------------ceeeEeec-ccccccEEEEecCCceEEEccCCCCCceEEE
Confidence 6889999999999999999997544 44666666 5667788888777765555554 7889999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
++...+ ..+-+.+|...|+.++.+|- .+.+++++.|++|++||+|..+
T Consensus 86 sl~dNk----------ylRYF~GH~~~V~sL~~sP~-~d~FlS~S~D~tvrLWDlR~~~ 133 (311)
T KOG1446|consen 86 SLHDNK----------YLRYFPGHKKRVNSLSVSPK-DDTFLSSSLDKTVRLWDLRVKK 133 (311)
T ss_pred EeecCc----------eEEEcCCCCceEEEEEecCC-CCeEEecccCCeEEeeEecCCC
Confidence 998876 67777899999999999999 8999999999999999999654
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=7e-17 Score=99.02 Aligned_cols=106 Identities=21% Similarity=0.394 Sum_probs=90.4
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEeccCC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPE 83 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~ 83 (138)
..++|.|+.-|.|+|.|+... ++...+.+ |...|+.+++.|+.+ ++++++.|.+|++|+++..
T Consensus 105 ~p~la~~G~~GvIrVid~~~~---------------~~~~~~~g-hG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~ 168 (385)
T KOG1034|consen 105 NPFLAAGGYLGVIRVIDVVSG---------------QCSKNYRG-HGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTD 168 (385)
T ss_pred CeeEEeecceeEEEEEecchh---------------hhccceec-cCccchhhhcCCCCCcEEEEecCCceEEEEeccCC
Confidence 458888999999999996443 45677788 899999999999885 8999999999999999987
Q ss_pred CCCCceeeeeeeeeee---cccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 84 AGDSDMVSFDLVHTEH---RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
. +...+ .+|...|.++.|+++ +..+++++.|.+|++|++..++
T Consensus 169 ~----------Cv~VfGG~egHrdeVLSvD~~~~-gd~i~ScGmDhslk~W~l~~~~ 214 (385)
T KOG1034|consen 169 V----------CVAVFGGVEGHRDEVLSVDFSLD-GDRIASCGMDHSLKLWRLNVKE 214 (385)
T ss_pred e----------EEEEecccccccCcEEEEEEcCC-CCeeeccCCcceEEEEecChhH
Confidence 5 33222 478999999999999 9999999999999999998554
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=8.2e-17 Score=97.79 Aligned_cols=132 Identities=23% Similarity=0.397 Sum_probs=94.5
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCC---------------------CC--------CCceEEeEEecCCCccCe
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTP---------------------DN--------DSVWKCVCTLSGHHGRTI 54 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~---------------------~~--------~~~~~~~~~~~~~~~~~v 54 (138)
|...|.++|-|.+++|||....+....+..+ .. .....+.+.+.+ |.+.|
T Consensus 113 DtGmFtssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsG-Hr~~v 191 (397)
T KOG4283|consen 113 DTGMFTSSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSG-HRDGV 191 (397)
T ss_pred cCceeecccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeecc-ccCce
Confidence 5567888999999999997654432211110 00 122345567788 89999
Q ss_pred EEEEEecCCC-eEEEeeCCCcEEEEeccCCCCCCc-----eeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcE
Q psy14817 55 YDISWCHLTD-LIATACGDDAIRIFKENPEAGDSD-----MVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 128 (138)
Q Consensus 55 ~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v 128 (138)
.+|.|+|... .|++|+.||.|++||++...+.-. .............|.+.|+.++|..+ +.++++++.|..+
T Consensus 192 laV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd-~~~l~~~gtd~r~ 270 (397)
T KOG4283|consen 192 LAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSD-ARYLASCGTDDRI 270 (397)
T ss_pred EEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeeccc-chhhhhccCccce
Confidence 9999999988 789999999999999997642110 00111112223478899999999999 9999999999999
Q ss_pred EEEEcCCCC
Q psy14817 129 KLWQIKLEN 137 (138)
Q Consensus 129 ~~wd~~~~~ 137 (138)
++|+...++
T Consensus 271 r~wn~~~G~ 279 (397)
T KOG4283|consen 271 RVWNMESGR 279 (397)
T ss_pred EEeecccCc
Confidence 999987664
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.9e-16 Score=96.10 Aligned_cols=106 Identities=16% Similarity=0.172 Sum_probs=81.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
||+.|.+||.|+.||.|-|||+.+- ...+.+.+ |-.+|.+++|+++|..|++++.|..|.+||+
T Consensus 31 Fs~~G~~lAvGc~nG~vvI~D~~T~---------------~iar~lsa-H~~pi~sl~WS~dgr~LltsS~D~si~lwDl 94 (405)
T KOG1273|consen 31 FSRWGDYLAVGCANGRVVIYDFDTF---------------RIARMLSA-HVRPITSLCWSRDGRKLLTSSRDWSIKLWDL 94 (405)
T ss_pred eccCcceeeeeccCCcEEEEEcccc---------------chhhhhhc-cccceeEEEecCCCCEeeeecCCceeEEEec
Confidence 7899999999999999999997432 23456666 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
..+. +.... .-..+|+...|+|...+.++..-.+..-.+-++
T Consensus 95 ~~gs----------~l~ri-rf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~ 136 (405)
T KOG1273|consen 95 LKGS----------PLKRI-RFDSPVWGAQWHPRKRNKCVATIMEESPVVIDF 136 (405)
T ss_pred cCCC----------ceeEE-EccCccceeeeccccCCeEEEEEecCCcEEEEe
Confidence 9887 22222 345688888888874555555555554444443
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.1e-16 Score=102.82 Aligned_cols=109 Identities=17% Similarity=0.244 Sum_probs=95.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
++++|..|++|+..+.+++||.+...+ +-.+.+ |...|.++..+++|..+++++.||+|++||+
T Consensus 179 ~N~t~t~ivsGgtek~lr~wDprt~~k---------------imkLrG-HTdNVr~ll~~dDGt~~ls~sSDgtIrlWdL 242 (735)
T KOG0308|consen 179 MNQTGTIIVSGGTEKDLRLWDPRTCKK---------------IMKLRG-HTDNVRVLLVNDDGTRLLSASSDGTIRLWDL 242 (735)
T ss_pred cCCcceEEEecCcccceEEeccccccc---------------eeeeec-cccceEEEEEcCCCCeEeecCCCceEEeeec
Confidence 357788999999999999999765433 666778 9999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.... +...+..|...|+++..+|+ -..+.+|+.|+.|..-|+++.
T Consensus 243 gqQr----------Cl~T~~vH~e~VWaL~~~~s-f~~vYsG~rd~~i~~Tdl~n~ 287 (735)
T KOG0308|consen 243 GQQR----------CLATYIVHKEGVWALQSSPS-FTHVYSGGRDGNIYRTDLRNP 287 (735)
T ss_pred cccc----------eeeeEEeccCceEEEeeCCC-cceEEecCCCCcEEecccCCc
Confidence 9766 44445678889999999998 999999999999999998873
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.6e-16 Score=106.27 Aligned_cols=108 Identities=21% Similarity=0.348 Sum_probs=93.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
.|||++.++|||.|..|+||-+.-. .|-+.+-. |...|.++.|.|....+++++.|+.++-||-
T Consensus 558 IS~DSklivTgSADKnVKiWGLdFG---------------DCHKS~fA-HdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg 621 (888)
T KOG0306|consen 558 ISPDSKLIVTGSADKNVKIWGLDFG---------------DCHKSFFA-HDDSVMSVQFLPKTHLFFTCGKDGKVKQWDG 621 (888)
T ss_pred ccCCcCeEEeccCCCceEEeccccc---------------hhhhhhhc-ccCceeEEEEcccceeEEEecCcceEEeech
Confidence 4899999999999999999997544 34556666 8999999999999999999999999999988
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
..-. ....+.+|...|++++..|+ +.++++++.|.+|++|....
T Consensus 622 ~kFe----------~iq~L~~H~~ev~cLav~~~-G~~vvs~shD~sIRlwE~td 665 (888)
T KOG0306|consen 622 EKFE----------EIQKLDGHHSEVWCLAVSPN-GSFVVSSSHDKSIRLWERTD 665 (888)
T ss_pred hhhh----------hheeeccchheeeeeEEcCC-CCeEEeccCCceeEeeeccC
Confidence 7654 34455689999999999999 99999999999999997543
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.8e-17 Score=100.90 Aligned_cols=109 Identities=20% Similarity=0.291 Sum_probs=91.0
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++-.|++|++|..+..+|++.... ++....+ |...|.+|.|+|.|+.|++|+.|.+|+||..
T Consensus 237 wnPeafnF~~a~ED~nlY~~DmR~l~~--------------p~~v~~d-hvsAV~dVdfsptG~EfvsgsyDksIRIf~~ 301 (433)
T KOG0268|consen 237 WNPEAFNFVAANEDHNLYTYDMRNLSR--------------PLNVHKD-HVSAVMDVDFSPTGQEFVSGSYDKSIRIFPV 301 (433)
T ss_pred cCccccceeeccccccceehhhhhhcc--------------cchhhcc-cceeEEEeccCCCcchhccccccceEEEeec
Confidence 789888999999999999999876543 3666777 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeee-cccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEH-RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
+.+. ..... ...-..|.++.|+.| .+++++|+.|+.|++|-.+.
T Consensus 302 ~~~~----------SRdiYhtkRMq~V~~Vk~S~D-skyi~SGSdd~nvRlWka~A 346 (433)
T KOG0268|consen 302 NHGH----------SRDIYHTKRMQHVFCVKYSMD-SKYIISGSDDGNVRLWKAKA 346 (433)
T ss_pred CCCc----------chhhhhHhhhheeeEEEEecc-ccEEEecCCCcceeeeecch
Confidence 8765 11111 112357899999999 99999999999999997653
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=2e-16 Score=97.22 Aligned_cols=108 Identities=24% Similarity=0.371 Sum_probs=92.6
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccC
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 82 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~ 82 (138)
..|+.++|+|.|++-.+||.+.. .++..+.+ |....+.++-+|...++++++.|.+.++||++.
T Consensus 282 ~gg~Q~vTaSWDRTAnlwDVEtg---------------e~v~~LtG-Hd~ELtHcstHptQrLVvTsSrDtTFRLWDFRe 345 (481)
T KOG0300|consen 282 AGGQQMVTASWDRTANLWDVETG---------------EVVNILTG-HDSELTHCSTHPTQRLVVTSSRDTTFRLWDFRE 345 (481)
T ss_pred cCcceeeeeeccccceeeeeccC---------------ceeccccC-cchhccccccCCcceEEEEeccCceeEeccchh
Confidence 35789999999999999997554 45788888 899999999999999999999999999999995
Q ss_pred CCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 83 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.- .....+.+|...|++..|.. ...+++++.|.+|++||++..+
T Consensus 346 aI---------~sV~VFQGHtdtVTS~vF~~--dd~vVSgSDDrTvKvWdLrNMR 389 (481)
T KOG0300|consen 346 AI---------QSVAVFQGHTDTVTSVVFNT--DDRVVSGSDDRTVKVWDLRNMR 389 (481)
T ss_pred hc---------ceeeeecccccceeEEEEec--CCceeecCCCceEEEeeecccc
Confidence 43 23456679999999999976 4778899999999999998753
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.4e-17 Score=104.28 Aligned_cols=112 Identities=15% Similarity=0.347 Sum_probs=92.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
++|||+.|++|++-.++.|||+..+...- -..+.. ..-....++.+||.++.++++.||.|.|||+
T Consensus 473 L~pdgrtLivGGeastlsiWDLAapTpri-------------kaelts-sapaCyALa~spDakvcFsccsdGnI~vwDL 538 (705)
T KOG0639|consen 473 LLPDGRTLIVGGEASTLSIWDLAAPTPRI-------------KAELTS-SAPACYALAISPDAKVCFSCCSDGNIAVWDL 538 (705)
T ss_pred ecCCCceEEeccccceeeeeeccCCCcch-------------hhhcCC-cchhhhhhhcCCccceeeeeccCCcEEEEEc
Confidence 36899999999999999999986553311 112222 2234567889999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.... ..+.+.+|...+.||.++++ +..|-+|+-|.+||.||+|+++
T Consensus 539 hnq~----------~VrqfqGhtDGascIdis~d-GtklWTGGlDntvRcWDlregr 584 (705)
T KOG0639|consen 539 HNQT----------LVRQFQGHTDGASCIDISKD-GTKLWTGGLDNTVRCWDLREGR 584 (705)
T ss_pred ccce----------eeecccCCCCCceeEEecCC-CceeecCCCccceeehhhhhhh
Confidence 9766 66777899999999999999 9999999999999999998764
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-15 Score=101.93 Aligned_cols=103 Identities=26% Similarity=0.474 Sum_probs=88.5
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
-+.++++|+.|.++++||.. ..+|...+.+ |...+.++.. ....+++|+.|.+|++|++..+
T Consensus 260 ~~~~lvsgS~D~t~rvWd~~---------------sg~C~~~l~g-h~stv~~~~~--~~~~~~sgs~D~tVkVW~v~n~ 321 (537)
T KOG0274|consen 260 GGDKLVSGSTDKTERVWDCS---------------TGECTHSLQG-HTSSVRCLTI--DPFLLVSGSRDNTVKVWDVTNG 321 (537)
T ss_pred CCCEEEEEecCCcEEeEecC---------------CCcEEEEecC-CCceEEEEEc--cCceEeeccCCceEEEEeccCc
Confidence 36899999999999999953 3477999999 8999988865 4558888999999999999977
Q ss_pred CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 84 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
. ......+|..+|+++... +.++++|+.|++|++||+++++
T Consensus 322 ~----------~l~l~~~h~~~V~~v~~~---~~~lvsgs~d~~v~VW~~~~~~ 362 (537)
T KOG0274|consen 322 A----------CLNLLRGHTGPVNCVQLD---EPLLVSGSYDGTVKVWDPRTGK 362 (537)
T ss_pred c----------eEEEeccccccEEEEEec---CCEEEEEecCceEEEEEhhhce
Confidence 6 666666799999999985 7899999999999999998765
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=2e-16 Score=93.74 Aligned_cols=112 Identities=29% Similarity=0.494 Sum_probs=89.6
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC--eEEEeeCCCcEEEEecc
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD--LIATACGDDAIRIFKEN 81 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~--~~~s~~~d~~i~i~~~~ 81 (138)
-|.+||+|++||.|.||.... ..|.....+.. |...|++|+|.|.+. .|++++.||.|.|.+++
T Consensus 69 ~G~iLAScsYDgkVIiWke~~-------------g~w~k~~e~~~-h~~SVNsV~wapheygl~LacasSDG~vsvl~~~ 134 (299)
T KOG1332|consen 69 FGTILASCSYDGKVIIWKEEN-------------GRWTKAYEHAA-HSASVNSVAWAPHEYGLLLACASSDGKVSVLTYD 134 (299)
T ss_pred cCcEeeEeecCceEEEEecCC-------------Cchhhhhhhhh-hcccceeecccccccceEEEEeeCCCcEEEEEEc
Confidence 689999999999999999643 24555667777 899999999999875 88999999999999988
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCC-------------CCEEEEEeCCCcEEEEEcCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV-------------PGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-------------~~~l~~~~~d~~v~~wd~~~~ 136 (138)
...+ ........+|.-.|++++|.|.. ...|++|+.|..|+||+...+
T Consensus 135 ~~g~-------w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~ 195 (299)
T KOG1332|consen 135 SSGG-------WTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSD 195 (299)
T ss_pred CCCC-------ccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCc
Confidence 6520 11234445899999999998851 145999999999999998764
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.3e-16 Score=94.02 Aligned_cols=120 Identities=22% Similarity=0.356 Sum_probs=90.4
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEeccC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENP 82 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~ 82 (138)
+.++|.+.|-|-+..|||++..... ..--.+-. |...|..|+|...+. .|++.+.||++++||++.
T Consensus 162 dp~~igtSSiDTTCTiWdie~~~~~------------~vkTQLIA-HDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~ 228 (364)
T KOG0290|consen 162 DPNLIGTSSIDTTCTIWDIETGVSG------------TVKTQLIA-HDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRS 228 (364)
T ss_pred CcceeEeecccCeEEEEEEeecccc------------ceeeEEEe-cCcceeEEEeccCccceEEEecCCCcEEEEEecc
Confidence 4678999999999999998764210 01112233 899999999998765 999999999999999997
Q ss_pred CCC-------CC-cee------------------------------eeeeeeeeecccccceeEEEEccCCCCEEEEEeC
Q psy14817 83 EAG-------DS-DMV------------------------------SFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124 (138)
Q Consensus 83 ~~~-------~~-~~~------------------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 124 (138)
... +. ..+ ........+..|.+.|+.++|.|.....+++++.
T Consensus 229 leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGD 308 (364)
T KOG0290|consen 229 LEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGD 308 (364)
T ss_pred cccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCC
Confidence 651 00 000 0011233446899999999999998889999999
Q ss_pred CCcEEEEEcCCC
Q psy14817 125 DGDVKLWQIKLE 136 (138)
Q Consensus 125 d~~v~~wd~~~~ 136 (138)
|...-+||+.+.
T Consensus 309 D~qaliWDl~q~ 320 (364)
T KOG0290|consen 309 DCQALIWDLQQM 320 (364)
T ss_pred cceEEEEecccc
Confidence 999999999763
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-16 Score=100.58 Aligned_cols=107 Identities=27% Similarity=0.495 Sum_probs=85.3
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEE--EEecC-CCeEEEeeCCCcEEEE
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI--SWCHL-TDLIATACGDDAIRIF 78 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v--~~~~~-~~~~~s~~~d~~i~i~ 78 (138)
|.+++++.+--.+..+++||+... +.+..+.+ |+..-.-+ +|.-. ..++++|+.|+.|+||
T Consensus 404 S~d~k~~LvnL~~qei~LWDl~e~---------------~lv~kY~G-hkq~~fiIrSCFgg~~~~fiaSGSED~kvyIW 467 (519)
T KOG0293|consen 404 SKDGKLALVNLQDQEIHLWDLEEN---------------KLVRKYFG-HKQGHFIIRSCFGGGNDKFIASGSEDSKVYIW 467 (519)
T ss_pred cCCCcEEEEEcccCeeEEeecchh---------------hHHHHhhc-ccccceEEEeccCCCCcceEEecCCCceEEEE
Confidence 668899999999999999998532 33556666 54432223 34322 2589999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
+...+. ....+.+|...|++++|+|.++.++++++.||+||||-+.
T Consensus 468 hr~sgk----------ll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~ 513 (519)
T KOG0293|consen 468 HRISGK----------LLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPS 513 (519)
T ss_pred EccCCc----------eeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCC
Confidence 999887 6667779999999999999888999999999999999764
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.1e-16 Score=102.41 Aligned_cols=102 Identities=21% Similarity=0.342 Sum_probs=88.9
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
..++++||.|.+|++|++..+ +++..+.+ |.++|.++..+ +.++++|+.|++|++|++...+
T Consensus 301 ~~~~~sgs~D~tVkVW~v~n~---------------~~l~l~~~-h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~ 362 (537)
T KOG0274|consen 301 PFLLVSGSRDNTVKVWDVTNG---------------ACLNLLRG-HTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGK 362 (537)
T ss_pred CceEeeccCCceEEEEeccCc---------------ceEEEecc-ccccEEEEEec--CCEEEEEecCceEEEEEhhhce
Confidence 456788999999999997533 66888888 99999999987 8899999999999999999776
Q ss_pred CCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 85 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+...+.+|...|.++.+.+. ..+++|+.|+.|++||++++
T Consensus 363 ----------cl~sl~gH~~~V~sl~~~~~--~~~~Sgs~D~~IkvWdl~~~ 402 (537)
T KOG0274|consen 363 ----------CLKSLSGHTGRVYSLIVDSE--NRLLSGSLDTTIKVWDLRTK 402 (537)
T ss_pred ----------eeeeecCCcceEEEEEecCc--ceEEeeeeccceEeecCCch
Confidence 66667789999999977542 89999999999999999876
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.3e-16 Score=92.68 Aligned_cols=124 Identities=17% Similarity=0.200 Sum_probs=96.2
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCcc--------------------------------------CCCCCCceEEeE
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIP--------------------------------------TPDNDSVWKCVC 44 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~ 44 (138)
.+.+.++||+.|.++++||..........+ .+.......|+.
T Consensus 62 ~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~ 141 (327)
T KOG0643|consen 62 WDSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYL 141 (327)
T ss_pred CCcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceE
Confidence 356789999999999999986654332110 000111234555
Q ss_pred EecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC
Q psy14817 45 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124 (138)
Q Consensus 45 ~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 124 (138)
.+.. +...++.+-|.|.++.|++|..||.|..||.+.+. ........|...|+.|+++++ ..++++++.
T Consensus 142 kI~t-~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~---------~~v~s~~~h~~~Ind~q~s~d-~T~FiT~s~ 210 (327)
T KOG0643|consen 142 KIPT-PDSKITSALWGPLGETIIAGHEDGSISIYDARTGK---------ELVDSDEEHSSKINDLQFSRD-RTYFITGSK 210 (327)
T ss_pred EecC-CccceeeeeecccCCEEEEecCCCcEEEEEcccCc---------eeeechhhhccccccccccCC-cceEEeccc
Confidence 6666 67889999999999999999999999999999875 234444578899999999999 999999999
Q ss_pred CCcEEEEEcCCCC
Q psy14817 125 DGDVKLWQIKLEN 137 (138)
Q Consensus 125 d~~v~~wd~~~~~ 137 (138)
|.+-++||.++-+
T Consensus 211 Dttakl~D~~tl~ 223 (327)
T KOG0643|consen 211 DTTAKLVDVRTLE 223 (327)
T ss_pred Cccceeeecccee
Confidence 9999999987643
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.7e-16 Score=98.50 Aligned_cols=120 Identities=17% Similarity=0.170 Sum_probs=95.2
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
+|+|.+++.|...|.+.+|.+... ..+..+.. |...|+|+.|+-++.+|++|+.||.|.+|.+-
T Consensus 90 ~n~G~~l~ag~i~g~lYlWelssG---------------~LL~v~~a-HYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~ 153 (476)
T KOG0646|consen 90 SNLGYFLLAGTISGNLYLWELSSG---------------ILLNVLSA-HYQSITCLKFSDDGSHIITGSKDGAVLVWLLT 153 (476)
T ss_pred CCCceEEEeecccCcEEEEEeccc---------------cHHHHHHh-hccceeEEEEeCCCcEEEecCCCccEEEEEEE
Confidence 578999998889999999997544 44667777 89999999999999999999999999999876
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccC-CCCEEEEEeCCCcEEEEEcCCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV-VPGMLASCSDDGDVKLWQIKLENL 138 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~d~~v~~wd~~~~~~ 138 (138)
..-...+.. .....+.+..|+-+|+++...+. ....+++++.|.++++||+..+.|
T Consensus 154 ~lv~a~~~~-~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~L 210 (476)
T KOG0646|consen 154 DLVSADNDH-SVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVL 210 (476)
T ss_pred eecccccCC-CccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEecccee
Confidence 433111111 22245556789999999988765 246899999999999999987753
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=1e-15 Score=91.48 Aligned_cols=105 Identities=28% Similarity=0.371 Sum_probs=87.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|+|++||+|+.|..+.+||+... -|++.+.. +.-+|..+.|+-+|++|++++.|..|-|=++
T Consensus 197 f~p~GryfA~GsADAlvSLWD~~EL---------------iC~R~isR-ldwpVRTlSFS~dg~~lASaSEDh~IDIA~v 260 (313)
T KOG1407|consen 197 FDPDGRYFATGSADALVSLWDVDEL---------------ICERCISR-LDWPVRTLSFSHDGRMLASASEDHFIDIAEV 260 (313)
T ss_pred ECCCCceEeeccccceeeccChhHh---------------hhheeecc-ccCceEEEEeccCcceeeccCccceEEeEec
Confidence 6899999999999999999997544 45677777 7889999999999999999999999999998
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC---------CcEEEEEc
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD---------GDVKLWQI 133 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---------~~v~~wd~ 133 (138)
+.+. .... -.+.++...++|+|. ..+|+.++.| |.+++|-+
T Consensus 261 etGd----------~~~e-I~~~~~t~tVAWHPk-~~LLAyA~ddk~~d~~reag~vKiFG~ 310 (313)
T KOG1407|consen 261 ETGD----------RVWE-IPCEGPTFTVAWHPK-RPLLAYACDDKDGDSNREAGTVKIFGL 310 (313)
T ss_pred ccCC----------eEEE-eeccCCceeEEecCC-CceeeEEecCCCCccccccceeEEecC
Confidence 8876 3222 257788999999999 8888888754 56666644
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=2e-15 Score=91.81 Aligned_cols=106 Identities=19% Similarity=0.336 Sum_probs=86.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|.++.|+.++.||++++|+...... ...+. |..++.+++|.+ ...+++|+.||.|+.+|+
T Consensus 21 f~~~~~~LLvssWDgslrlYdv~~~~l---------------~~~~~--~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dl 82 (323)
T KOG1036|consen 21 FSPSSSDLLVSSWDGSLRLYDVPANSL---------------KLKFK--HGAPLLDCAFAD-ESTIVTGGLDGQVRRYDL 82 (323)
T ss_pred EcCcCCcEEEEeccCcEEEEeccchhh---------------hhhee--cCCceeeeeccC-CceEEEeccCceEEEEEe
Confidence 567788888899999999999744311 22222 688999999986 568889999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
..+. ......|...|.++.+.+. ...+++|++|++|++||.|..
T Consensus 83 n~~~-----------~~~igth~~~i~ci~~~~~-~~~vIsgsWD~~ik~wD~R~~ 126 (323)
T KOG1036|consen 83 NTGN-----------EDQIGTHDEGIRCIEYSYE-VGCVISGSWDKTIKFWDPRNK 126 (323)
T ss_pred cCCc-----------ceeeccCCCceEEEEeecc-CCeEEEcccCccEEEEecccc
Confidence 9876 2333478999999999998 889999999999999999853
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.5e-15 Score=91.40 Aligned_cols=67 Identities=13% Similarity=0.289 Sum_probs=57.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC--eEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD--LIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~--~~~s~~~d~~i~i~ 78 (138)
|+.+|..+++|+.|+.+++||+...+. ..+.. |.++|..++|-+... .|++|+=|.+|+.|
T Consensus 80 WsddgskVf~g~~Dk~~k~wDL~S~Q~----------------~~v~~-Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfW 142 (347)
T KOG0647|consen 80 WSDDGSKVFSGGCDKQAKLWDLASGQV----------------SQVAA-HDAPVKTCHWVPGMNYQCLVTGSWDKTLKFW 142 (347)
T ss_pred EccCCceEEeeccCCceEEEEccCCCe----------------eeeee-cccceeEEEEecCCCcceeEecccccceeec
Confidence 578999999999999999999876532 34445 899999999988765 89999999999999
Q ss_pred eccCCC
Q psy14817 79 KENPEA 84 (138)
Q Consensus 79 ~~~~~~ 84 (138)
|.+...
T Consensus 143 D~R~~~ 148 (347)
T KOG0647|consen 143 DTRSSN 148 (347)
T ss_pred ccCCCC
Confidence 999764
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=1e-15 Score=99.82 Aligned_cols=121 Identities=21% Similarity=0.406 Sum_probs=95.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCC--CeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT--DLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~s~~~d~~i~i~ 78 (138)
|+.+|.+|++||+|-.+.|||... .+++..+...|...|.++.|-|.. ..+++|..|..|+++
T Consensus 58 Wn~dG~lL~SGSDD~r~ivWd~~~---------------~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lf 122 (758)
T KOG1310|consen 58 WNADGELLASGSDDTRLIVWDPFE---------------YKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLF 122 (758)
T ss_pred ecCCCCEEeecCCcceEEeecchh---------------cceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEE
Confidence 678999999999999999999642 244666655599999999999965 389999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|+...++...-............|...|..++..|+.++.+-+++.||+++-+|+|.+
T Consensus 123 dl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREp 180 (758)
T KOG1310|consen 123 DLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREP 180 (758)
T ss_pred ecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCC
Confidence 9996542222222222333445788999999999996789999999999999999875
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.5e-16 Score=98.86 Aligned_cols=106 Identities=20% Similarity=0.297 Sum_probs=78.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
.|+||++||+|+.|..|.||+.++. ++++.+.+ |.+.|.+++|-.....+++++.|+++++|++
T Consensus 210 vS~Dgkylatgg~d~~v~Iw~~~t~---------------ehv~~~~g-hr~~V~~L~fr~gt~~lys~s~Drsvkvw~~ 273 (479)
T KOG0299|consen 210 VSSDGKYLATGGRDRHVQIWDCDTL---------------EHVKVFKG-HRGAVSSLAFRKGTSELYSASADRSVKVWSI 273 (479)
T ss_pred EcCCCcEEEecCCCceEEEecCccc---------------chhhcccc-cccceeeeeeecCccceeeeecCCceEEEeh
Confidence 4899999999999999999996554 44777888 9999999999877779999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
.... ....+.+|...|..+....- ...+..|+.|+++++|.+
T Consensus 274 ~~~s----------~vetlyGHqd~v~~IdaL~r-eR~vtVGgrDrT~rlwKi 315 (479)
T KOG0299|consen 274 DQLS----------YVETLYGHQDGVLGIDALSR-ERCVTVGGRDRTVRLWKI 315 (479)
T ss_pred hHhH----------HHHHHhCCccceeeechhcc-cceEEeccccceeEEEec
Confidence 9765 33333455555555554443 444444445555555554
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.9e-16 Score=101.62 Aligned_cols=112 Identities=21% Similarity=0.433 Sum_probs=91.6
Q ss_pred ccCCCeEEEeeC-----CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEE
Q psy14817 2 IQTGSRLATCSD-----DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIR 76 (138)
Q Consensus 2 s~~~~~l~t~s~-----d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~ 76 (138)
||+|+++||++. ...|++|+. .+|..++.+.+ |.-.|+.++|+|++++|++.++|.++.
T Consensus 534 s~~gnliASaCKS~~~ehAvI~lw~t---------------~~W~~~~~L~~-HsLTVT~l~FSpdg~~LLsvsRDRt~s 597 (764)
T KOG1063|consen 534 SPTGNLIASACKSSLKEHAVIRLWNT---------------ANWLQVQELEG-HSLTVTRLAFSPDGRYLLSVSRDRTVS 597 (764)
T ss_pred cCCCCEEeehhhhCCccceEEEEEec---------------cchhhhheecc-cceEEEEEEECCCCcEEEEeecCceEE
Confidence 789999999986 456889994 44555677888 899999999999999999999999999
Q ss_pred EEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 77 IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+|...... .....+ ...+.|+.-|++..|+|+ ..++++++.|.+|++|.....
T Consensus 598 l~~~~~~~--~~e~~f----a~~k~HtRIIWdcsW~pd-e~~FaTaSRDK~VkVW~~~~~ 650 (764)
T KOG1063|consen 598 LYEVQEDI--KDEFRF----ACLKAHTRIIWDCSWSPD-EKYFATASRDKKVKVWEEPDL 650 (764)
T ss_pred eeeeeccc--chhhhh----ccccccceEEEEcccCcc-cceeEEecCCceEEEEeccCc
Confidence 99885433 111111 224689999999999999 888999999999999987654
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.8e-15 Score=91.05 Aligned_cols=112 Identities=25% Similarity=0.425 Sum_probs=83.5
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC----CCcEEEEe
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG----DDAIRIFK 79 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~----d~~i~i~~ 79 (138)
.+..+.+|+.||+|++||+|...+.. ......+...+..+++.+-.+..+++|.. +-.+.+||
T Consensus 83 s~h~v~s~ssDG~Vr~wD~Rs~~e~a-------------~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwD 149 (376)
T KOG1188|consen 83 SPHGVISCSSDGTVRLWDIRSQAESA-------------RISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWD 149 (376)
T ss_pred CCCeeEEeccCCeEEEEEeecchhhh-------------heeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEE
Confidence 45678999999999999998765532 23333312246677776666677777743 44699999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.+.... ........|...|+.++|+|.++++|++|+.||.|.+||++..
T Consensus 150 vR~~qq--------~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d 198 (376)
T KOG1188|consen 150 VRSEQQ--------LLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKD 198 (376)
T ss_pred eccccc--------hhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCC
Confidence 997650 1233445799999999999998999999999999999998754
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=8.5e-15 Score=92.86 Aligned_cols=106 Identities=22% Similarity=0.387 Sum_probs=86.2
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEeccCC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPE 83 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~ 83 (138)
.+.||+||.|.+|++||+... +|...+.. |.+.|.++.|+|... .+++|+.|+++.+.|.+..
T Consensus 256 ~nVLaSgsaD~TV~lWD~~~g---------------~p~~s~~~-~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~ 319 (463)
T KOG0270|consen 256 RNVLASGSADKTVKLWDVDTG---------------KPKSSITH-HGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDP 319 (463)
T ss_pred ceeEEecCCCceEEEEEcCCC---------------Ccceehhh-cCCceeEEEecCCCceEEEeccccceEEeeeccCc
Confidence 357999999999999997554 44566664 899999999999876 9999999999999999953
Q ss_pred CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 84 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
. .......-.+.|-.++|.|.....++++..||+|+-+|+|..
T Consensus 320 ~----------~s~~~wk~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~ 362 (463)
T KOG0270|consen 320 S----------NSGKEWKFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNP 362 (463)
T ss_pred c----------ccCceEEeccceEEEEecCCCceeEEEecCCceEEeeecCCC
Confidence 3 111112345688899999986778889999999999999976
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.5e-15 Score=98.10 Aligned_cols=118 Identities=14% Similarity=0.175 Sum_probs=95.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
.|||.+..++|+.||.|.|||+++. ..+..|++ |...+.||..+++|..|-+|+.|.+|+-||+
T Consensus 517 ~spDakvcFsccsdGnI~vwDLhnq---------------~~VrqfqG-htDGascIdis~dGtklWTGGlDntvRcWDl 580 (705)
T KOG0639|consen 517 ISPDAKVCFSCCSDGNIAVWDLHNQ---------------TLVRQFQG-HTDGASCIDISKDGTKLWTGGLDNTVRCWDL 580 (705)
T ss_pred cCCccceeeeeccCCcEEEEEcccc---------------eeeecccC-CCCCceeEEecCCCceeecCCCccceeehhh
Confidence 4799999999999999999998765 34789999 8999999999999999999999999999999
Q ss_pred cCCCCC---------------------------Cceeee---eeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEE
Q psy14817 81 NPEAGD---------------------------SDMVSF---DLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKL 130 (138)
Q Consensus 81 ~~~~~~---------------------------~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~ 130 (138)
+.+... ...... ......+..|...|.+++|.+. ++++++.+.|..+..
T Consensus 581 regrqlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheScVLSlKFa~c-GkwfvStGkDnlLna 659 (705)
T KOG0639|consen 581 REGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHESCVLSLKFAYC-GKWFVSTGKDNLLNA 659 (705)
T ss_pred hhhhhhhhhhhhhhheecccCCCccceeeecccCcEEEEecCCccceeecccccEEEEEEeccc-CceeeecCchhhhhh
Confidence 987511 000000 0112334467889999999999 999999999999999
Q ss_pred EEcCC
Q psy14817 131 WQIKL 135 (138)
Q Consensus 131 wd~~~ 135 (138)
|...-
T Consensus 660 wrtPy 664 (705)
T KOG0639|consen 660 WRTPY 664 (705)
T ss_pred ccCcc
Confidence 97543
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.1e-15 Score=95.18 Aligned_cols=124 Identities=19% Similarity=0.229 Sum_probs=95.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCC-ccCCCCCC-ceEEeEEe-cCCCccCeEEEEEecCCCeEEEeeCCCcEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAG-IPTPDNDS-VWKCVCTL-SGHHGRTIYDISWCHLTDLIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~-~~~~~~~~-~~~~~~~~-~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i 77 (138)
++|++.+..+++.|++|.-|+......... .+.+.... -+.+...- .. |...+.+++.++++.+|++|+.|..|.|
T Consensus 150 ls~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~-h~keil~~avS~Dgkylatgg~d~~v~I 228 (479)
T KOG0299|consen 150 LSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKG-HVKEILTLAVSSDGKYLATGGRDRHVQI 228 (479)
T ss_pred eeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCccccc-ccceeEEEEEcCCCcEEEecCCCceEEE
Confidence 478999999999999999999866543311 11110000 01111111 24 7889999999999999999999999999
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|+.+..+ ....+.+|.+.|.+++|... ...+++++.|+++++|++...
T Consensus 229 w~~~t~e----------hv~~~~ghr~~V~~L~fr~g-t~~lys~s~Drsvkvw~~~~~ 276 (479)
T KOG0299|consen 229 WDCDTLE----------HVKVFKGHRGAVSSLAFRKG-TSELYSASADRSVKVWSIDQL 276 (479)
T ss_pred ecCcccc----------hhhcccccccceeeeeeecC-ccceeeeecCCceEEEehhHh
Confidence 9999877 44456799999999999988 889999999999999998754
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.1e-14 Score=84.43 Aligned_cols=105 Identities=18% Similarity=0.275 Sum_probs=77.8
Q ss_pred CccCCCeEEEe--eCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCC---CcE
Q psy14817 1 MIQTGSRLATC--SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD---DAI 75 (138)
Q Consensus 1 ~s~~~~~l~t~--s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d---~~i 75 (138)
|+|+|+.||.. ..+..|.+||++ .+.+..+. ...++.+.|+|+|++++.++.+ |.|
T Consensus 67 WsP~g~~favi~g~~~~~v~lyd~~----------------~~~i~~~~---~~~~n~i~wsP~G~~l~~~g~~n~~G~l 127 (194)
T PF08662_consen 67 WSPNGNEFAVIYGSMPAKVTLYDVK----------------GKKIFSFG---TQPRNTISWSPDGRFLVLAGFGNLNGDL 127 (194)
T ss_pred ECcCCCEEEEEEccCCcccEEEcCc----------------ccEeEeec---CCCceEEEECCCCCEEEEEEccCCCcEE
Confidence 68999987654 457899999974 13345543 4577899999999988887643 569
Q ss_pred EEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC------CCcEEEEEcCCCC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD------DGDVKLWQIKLEN 137 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~------d~~v~~wd~~~~~ 137 (138)
.+||.+... .... .+...++.++|+|+ +++++++.. |..++||++....
T Consensus 128 ~~wd~~~~~----------~i~~--~~~~~~t~~~WsPd-Gr~~~ta~t~~r~~~dng~~Iw~~~G~~ 182 (194)
T PF08662_consen 128 EFWDVRKKK----------KIST--FEHSDATDVEWSPD-GRYLATATTSPRLRVDNGFKIWSFQGRL 182 (194)
T ss_pred EEEECCCCE----------Eeec--cccCcEEEEEEcCC-CCEEEEEEeccceeccccEEEEEecCeE
Confidence 999999544 2222 23345789999999 999988864 7889999986543
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.2e-15 Score=93.89 Aligned_cols=124 Identities=25% Similarity=0.430 Sum_probs=101.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCC-CCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGN-SAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|+|.++|+|+++|.|.+|....-.. ....+.....+.|.....+.+ |...|..++|+|++.++++++-|.++++||
T Consensus 73 f~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~-h~~diydL~Ws~d~~~l~s~s~dns~~l~D 151 (434)
T KOG1009|consen 73 FSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRG-HRDDIYDLAWSPDSNFLVSGSVDNSVRLWD 151 (434)
T ss_pred EcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecc-cccchhhhhccCCCceeeeeeccceEEEEE
Confidence 789999999999999999999653111 011122233456777788888 899999999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+..+. .......|...+..++|.|. .+++++-+.|...+.+++...
T Consensus 152 v~~G~----------l~~~~~dh~~yvqgvawDpl-~qyv~s~s~dr~~~~~~~~~~ 197 (434)
T KOG1009|consen 152 VHAGQ----------LLAILDDHEHYVQGVAWDPL-NQYVASKSSDRHPEGFSAKLK 197 (434)
T ss_pred eccce----------eEeeccccccccceeecchh-hhhhhhhccCcccceeeeeee
Confidence 99987 66777799999999999998 999999999988877776543
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.5e-14 Score=98.57 Aligned_cols=118 Identities=18% Similarity=0.367 Sum_probs=90.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+-+|+++|.||+|-.|++-+...... ...+.+ |.++|.++.|+|.+.++++.+-||.|++|++
T Consensus 104 v~g~g~~iaagsdD~~vK~~~~~D~s~---------------~~~lrg-h~apVl~l~~~p~~~fLAvss~dG~v~iw~~ 167 (933)
T KOG1274|consen 104 VSGSGKMIAAGSDDTAVKLLNLDDSSQ---------------EKVLRG-HDAPVLQLSYDPKGNFLAVSSCDGKVQIWDL 167 (933)
T ss_pred EecCCcEEEeecCceeEEEEeccccch---------------heeecc-cCCceeeeeEcCCCCEEEEEecCceEEEEEc
Confidence 456889999999999999999765543 466777 8999999999999999999999999999999
Q ss_pred cCCCCC--------C---------ceeee------------------------eeeee-eecccccceeEEEEccCCCCE
Q psy14817 81 NPEAGD--------S---------DMVSF------------------------DLVHT-EHRAHNQDVNCVAWNPVVPGM 118 (138)
Q Consensus 81 ~~~~~~--------~---------~~~~~------------------------~~~~~-~~~~~~~~v~~~~~~~~~~~~ 118 (138)
..+... . ..+.+ ..... ....+...+..++|+|+ |.+
T Consensus 168 ~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPn-G~Y 246 (933)
T KOG1274|consen 168 QDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPN-GKY 246 (933)
T ss_pred ccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCC-CcE
Confidence 976400 0 00000 00000 11123345899999999 999
Q ss_pred EEEEeCCCcEEEEEcCC
Q psy14817 119 LASCSDDGDVKLWQIKL 135 (138)
Q Consensus 119 l~~~~~d~~v~~wd~~~ 135 (138)
|++++.||.|.|||..+
T Consensus 247 iAAs~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 247 IAASTLDGQILVWNVDT 263 (933)
T ss_pred EeeeccCCcEEEEeccc
Confidence 99999999999999873
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.61 E-value=7.2e-14 Score=85.41 Aligned_cols=124 Identities=26% Similarity=0.446 Sum_probs=89.4
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCC--CeEEEeeCCCcEEEEecc
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT--DLIATACGDDAIRIFKEN 81 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~s~~~d~~i~i~~~~ 81 (138)
-|+.+|+||.|+++.||.-..... ......|....++.. .+..|+.|.|.|.. -.+++++.||.++||+..
T Consensus 72 fGqvvA~cS~Drtv~iWEE~~~~~------~~~~~~Wv~~ttl~D-srssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~ 144 (361)
T KOG2445|consen 72 FGQVVATCSYDRTVSIWEEQEKSE------EAHGRRWVRRTTLVD-SRSSVTDVKFAPKHLGLKLAAASADGILRIYEAP 144 (361)
T ss_pred ccceEEEEecCCceeeeeeccccc------ccccceeEEEEEeec-CCcceeEEEecchhcceEEEEeccCcEEEEEecC
Confidence 489999999999999999542221 112467777788877 68899999999965 489999999999999876
Q ss_pred CCC----------------CC--C-----------------------c--------eee--------eeeeeeeeccccc
Q psy14817 82 PEA----------------GD--S-----------------------D--------MVS--------FDLVHTEHRAHNQ 104 (138)
Q Consensus 82 ~~~----------------~~--~-----------------------~--------~~~--------~~~~~~~~~~~~~ 104 (138)
... .+ . + ... .......+..|+.
T Consensus 145 dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~d 224 (361)
T KOG2445|consen 145 DPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTD 224 (361)
T ss_pred CccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCC
Confidence 432 00 0 0 000 0001122336788
Q ss_pred ceeEEEEccCCC---CEEEEEeCCCcEEEEEcCC
Q psy14817 105 DVNCVAWNPVVP---GMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 105 ~v~~~~~~~~~~---~~l~~~~~d~~v~~wd~~~ 135 (138)
+|++++|.|+.+ .+|++++.|| |+||.++.
T Consensus 225 pI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~ 257 (361)
T KOG2445|consen 225 PIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKV 257 (361)
T ss_pred cceeeeeccccCCceeeEEEeecCc-EEEEEEee
Confidence 999999999744 4789999999 99999874
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.61 E-value=4e-14 Score=83.62 Aligned_cols=110 Identities=16% Similarity=0.228 Sum_probs=91.6
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
-|.|++|++|-.|.+..+||++.. ++++.+.. |...|.|++|+|...++++++.|..|++-|+.
T Consensus 240 dpsgrll~sg~~dssc~lydirg~---------------r~iq~f~p-hsadir~vrfsp~a~yllt~syd~~ikltdlq 303 (350)
T KOG0641|consen 240 DPSGRLLASGHADSSCMLYDIRGG---------------RMIQRFHP-HSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQ 303 (350)
T ss_pred CCCcceeeeccCCCceEEEEeeCC---------------ceeeeeCC-CccceeEEEeCCCceEEEEecccceEEEeecc
Confidence 488999999999999999998655 56888888 89999999999999999999999999999987
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
..- . . .........|...+..++|+|. .-.+++.+.|.+..+|-++
T Consensus 304 gdl---a--~-el~~~vv~ehkdk~i~~rwh~~-d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 304 GDL---A--H-ELPIMVVAEHKDKAIQCRWHPQ-DFSFISSSADKTATLWALN 349 (350)
T ss_pred cch---h--h-cCceEEEEeccCceEEEEecCc-cceeeeccCcceEEEeccC
Confidence 532 0 0 0112222478888889999998 7888999999999999765
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.5e-14 Score=86.86 Aligned_cols=118 Identities=26% Similarity=0.368 Sum_probs=88.2
Q ss_pred CccCCC-eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEE
Q psy14817 1 MIQTGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~-~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~ 78 (138)
|+|+.+ +||||++||.|+|||.+... .++..+.+ |...|++|+|+|.-. ++++++.|..|.+|
T Consensus 222 fNpnkq~~lvt~gDdgyvriWD~R~tk--------------~pv~el~~-HsHWvW~VRfn~~hdqLiLs~~SDs~V~Ls 286 (370)
T KOG1007|consen 222 FNPNKQHILVTCGDDGYVRIWDTRKTK--------------FPVQELPG-HSHWVWAVRFNPEHDQLILSGGSDSAVNLS 286 (370)
T ss_pred CCCCceEEEEEcCCCccEEEEeccCCC--------------ccccccCC-CceEEEEEEecCccceEEEecCCCceeEEE
Confidence 567664 78999999999999987543 34788888 899999999999764 89999999999999
Q ss_pred eccCCCCC---------C------c----eeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 79 KENPEAGD---------S------D----MVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 79 ~~~~~~~~---------~------~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
....-+-. . . .+...-.......|...|.+++|+.-++=+|++-+.||.+.|=.+
T Consensus 287 ca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V 360 (370)
T KOG1007|consen 287 CASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSV 360 (370)
T ss_pred eccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCceEEeecC
Confidence 66543200 0 0 011111223445789999999999764668899999999987554
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.2e-14 Score=91.71 Aligned_cols=117 Identities=11% Similarity=0.082 Sum_probs=93.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
||.++++||+|+.|..+++|++..... ...-+++.....+|...|.|+.|+....++++|..+++|...|+
T Consensus 64 FS~N~~~L~SGGDD~~~~~W~~de~~~---------~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDi 134 (609)
T KOG4227|consen 64 FSHNDRFLASGGDDMHGRVWNVDELMV---------RKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDI 134 (609)
T ss_pred eccCCeEEeecCCcceeeeechHHHHh---------hcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeec
Confidence 688999999999999999999754321 11114455555557789999999998899999999999999999
Q ss_pred cCCCCCCceeeeeeeeeee--cccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEH--RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
...+ ..... ....+.|..+..+|. .++|++.+.++.|.+||.|..+
T Consensus 135 Et~q----------si~V~~~~~~~~~VY~m~~~P~-DN~~~~~t~~~~V~~~D~Rd~~ 182 (609)
T KOG4227|consen 135 ETKQ----------SIYVANENNNRGDVYHMDQHPT-DNTLIVVTRAKLVSFIDNRDRQ 182 (609)
T ss_pred ccce----------eeeeecccCcccceeecccCCC-CceEEEEecCceEEEEeccCCC
Confidence 9765 33332 123458999999999 9999999999999999998654
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.7e-15 Score=92.70 Aligned_cols=109 Identities=16% Similarity=0.201 Sum_probs=87.5
Q ss_pred Ccc-CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQ-TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~-~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+| +...|++|..|++|.+||++.... +..+.. .-..+.|+|+|..-.|++++.|..++.||
T Consensus 195 fNpvETsILas~~sDrsIvLyD~R~~~P---------------l~KVi~--~mRTN~IswnPeafnF~~a~ED~nlY~~D 257 (433)
T KOG0268|consen 195 FNPVETSILASCASDRSIVLYDLRQASP---------------LKKVIL--TMRTNTICWNPEAFNFVAANEDHNLYTYD 257 (433)
T ss_pred cCCCcchheeeeccCCceEEEecccCCc---------------cceeee--eccccceecCccccceeeccccccceehh
Confidence 445 346788999999999999877643 222221 23457899999777999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
++... .......+|.+.|.+++|+|. ++-+++|+.|.+|+||..+.+
T Consensus 258 mR~l~---------~p~~v~~dhvsAV~dVdfspt-G~EfvsgsyDksIRIf~~~~~ 304 (433)
T KOG0268|consen 258 MRNLS---------RPLNVHKDHVSAVMDVDFSPT-GQEFVSGSYDKSIRIFPVNHG 304 (433)
T ss_pred hhhhc---------ccchhhcccceeEEEeccCCC-cchhccccccceEEEeecCCC
Confidence 99765 245556789999999999999 999999999999999988764
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.4e-13 Score=81.96 Aligned_cols=74 Identities=24% Similarity=0.322 Sum_probs=54.9
Q ss_pred CeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEE
Q psy14817 53 TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 53 ~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd 132 (138)
.|+++-..|...-++.++.|+.++-||++.+. +.+.+++|++.|.++.-... ...+++|+.||++|+||
T Consensus 116 eINam~ldP~enSi~~AgGD~~~y~~dlE~G~----------i~r~~rGHtDYvH~vv~R~~-~~qilsG~EDGtvRvWd 184 (325)
T KOG0649|consen 116 EINAMWLDPSENSILFAGGDGVIYQVDLEDGR----------IQREYRGHTDYVHSVVGRNA-NGQILSGAEDGTVRVWD 184 (325)
T ss_pred ccceeEeccCCCcEEEecCCeEEEEEEecCCE----------EEEEEcCCcceeeeeeeccc-CcceeecCCCccEEEEe
Confidence 35556666555534444466666777776665 67778899999999987555 66788999999999999
Q ss_pred cCCCC
Q psy14817 133 IKLEN 137 (138)
Q Consensus 133 ~~~~~ 137 (138)
.++++
T Consensus 185 ~kt~k 189 (325)
T KOG0649|consen 185 TKTQK 189 (325)
T ss_pred ccccc
Confidence 99875
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.6e-14 Score=87.36 Aligned_cols=69 Identities=16% Similarity=0.280 Sum_probs=56.0
Q ss_pred cc-CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 2 IQ-TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 2 s~-~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
.| +.+++++||.|.+||+|+++..... .....+.+ |...|.++.|++++.+|++++.|.+|++|++
T Consensus 144 ~p~~~qlvls~SkD~svRlwnI~~~~Cv------------~VfGG~eg-HrdeVLSvD~~~~gd~i~ScGmDhslk~W~l 210 (385)
T KOG1034|consen 144 HPDRPQLVLSASKDHSVRLWNIQTDVCV------------AVFGGVEG-HRDEVLSVDFSLDGDRIASCGMDHSLKLWRL 210 (385)
T ss_pred CCCCCcEEEEecCCceEEEEeccCCeEE------------EEeccccc-ccCcEEEEEEcCCCCeeeccCCcceEEEEec
Confidence 45 3479999999999999998665321 11234456 8999999999999999999999999999999
Q ss_pred cCC
Q psy14817 81 NPE 83 (138)
Q Consensus 81 ~~~ 83 (138)
...
T Consensus 211 ~~~ 213 (385)
T KOG1034|consen 211 NVK 213 (385)
T ss_pred Chh
Confidence 843
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.5e-14 Score=94.46 Aligned_cols=97 Identities=24% Similarity=0.402 Sum_probs=77.1
Q ss_pred eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCC
Q psy14817 7 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 86 (138)
Q Consensus 7 ~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~ 86 (138)
.++|||.|.+|++|.- .+.++++.+ |..-|.++++-++ ..|++++.||.|++|++...
T Consensus 153 ~~vTgsaDKtIklWk~-----------------~~~l~tf~g-HtD~VRgL~vl~~-~~flScsNDg~Ir~w~~~ge--- 210 (745)
T KOG0301|consen 153 TYVTGSADKTIKLWKG-----------------GTLLKTFSG-HTDCVRGLAVLDD-SHFLSCSNDGSIRLWDLDGE--- 210 (745)
T ss_pred cEEeccCcceeeeccC-----------------Cchhhhhcc-chhheeeeEEecC-CCeEeecCCceEEEEeccCc---
Confidence 5666666666666662 245788999 9999999998864 46778889999999999543
Q ss_pred CceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 87 SDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
......+|+.-+.+++...+ .+.+++++.|+++++|+..
T Consensus 211 --------~l~~~~ghtn~vYsis~~~~-~~~Ivs~gEDrtlriW~~~ 249 (745)
T KOG0301|consen 211 --------VLLEMHGHTNFVYSISMALS-DGLIVSTGEDRTLRIWKKD 249 (745)
T ss_pred --------eeeeeeccceEEEEEEecCC-CCeEEEecCCceEEEeecC
Confidence 34445689999999997777 8999999999999999854
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.7e-14 Score=94.34 Aligned_cols=118 Identities=19% Similarity=0.260 Sum_probs=80.9
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeE--EecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEE
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC--TLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIF 78 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~ 78 (138)
-|-...|++++.|.+++.||+.... ++. .+.+ |...|.+++|.+..+ .|++|+.||.+.||
T Consensus 109 apge~~lVsasGDsT~r~Wdvk~s~---------------l~G~~~~~G-H~~SvkS~cf~~~n~~vF~tGgRDg~illW 172 (720)
T KOG0321|consen 109 APGESLLVSASGDSTIRPWDVKTSR---------------LVGGRLNLG-HTGSVKSECFMPTNPAVFCTGGRDGEILLW 172 (720)
T ss_pred CCCceeEEEccCCceeeeeeeccce---------------eecceeecc-cccccchhhhccCCCcceeeccCCCcEEEE
Confidence 3534589999999999999975442 233 3667 899999999999987 89999999999999
Q ss_pred eccCCCCCC------------ce---eee--eeeeeeecccccc----eeEEEEccCCCCEEEEEeC-CCcEEEEEcCCC
Q psy14817 79 KENPEAGDS------------DM---VSF--DLVHTEHRAHNQD----VNCVAWNPVVPGMLASCSD-DGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~------------~~---~~~--~~~~~~~~~~~~~----v~~~~~~~~~~~~l~~~~~-d~~v~~wd~~~~ 136 (138)
|++...... +. +.. .......+++... |+.+.| .| ...|++++. |+.|+|||+|..
T Consensus 173 D~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~f-kD-e~tlaSaga~D~~iKVWDLRk~ 250 (720)
T KOG0321|consen 173 DCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLF-KD-ESTLASAGAADSTIKVWDLRKN 250 (720)
T ss_pred EEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEE-ec-cceeeeccCCCcceEEEeeccc
Confidence 999654100 00 000 0011111233333 444444 45 678888887 999999999875
Q ss_pred C
Q psy14817 137 N 137 (138)
Q Consensus 137 ~ 137 (138)
.
T Consensus 251 ~ 251 (720)
T KOG0321|consen 251 Y 251 (720)
T ss_pred c
Confidence 3
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.9e-14 Score=88.63 Aligned_cols=116 Identities=23% Similarity=0.383 Sum_probs=94.4
Q ss_pred CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec-----
Q psy14817 6 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE----- 80 (138)
Q Consensus 6 ~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~----- 80 (138)
+.+.++|.|.+-+||.++.. +|+..+.+ |.+.|++|.|++.+.++++++.|++..||..
T Consensus 161 pi~gtASADhTA~iWs~Esg---------------~CL~~Y~G-H~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~ 224 (481)
T KOG0300|consen 161 PICGTASADHTARIWSLESG---------------ACLATYTG-HTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWE 224 (481)
T ss_pred cceeecccccceeEEeeccc---------------cceeeecc-cccceeeEEeccccceEEEccCCcchHHHHHhhcCc
Confidence 47889999999999997543 77999999 9999999999999999999999999999962
Q ss_pred -cCCC------------------------CCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 81 -NPEA------------------------GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 81 -~~~~------------------------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
.... ...+.+....+...+.+|...|.+..|... ++.++++++|.+-.+||+.+
T Consensus 225 vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~g-g~Q~vTaSWDRTAnlwDVEt 303 (481)
T KOG0300|consen 225 VPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAG-GQQMVTASWDRTANLWDVET 303 (481)
T ss_pred CCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcC-cceeeeeeccccceeeeecc
Confidence 2210 011222333345556789999999999998 99999999999999999998
Q ss_pred CCC
Q psy14817 136 ENL 138 (138)
Q Consensus 136 ~~~ 138 (138)
+++
T Consensus 304 ge~ 306 (481)
T KOG0300|consen 304 GEV 306 (481)
T ss_pred Cce
Confidence 863
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.1e-13 Score=82.57 Aligned_cols=126 Identities=16% Similarity=0.183 Sum_probs=85.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCC----------------CCCCce-----------EEeEEecC--CCc
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTP----------------DNDSVW-----------KCVCTLSG--HHG 51 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~----------------~~~~~~-----------~~~~~~~~--~~~ 51 (138)
++|-+..|++++.|++|++||++........... +..... .|..++.- ...
T Consensus 108 ~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~ 187 (311)
T KOG1446|consen 108 VSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDE 187 (311)
T ss_pred ecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCc
Confidence 4788899999999999999999866443221110 000000 11111111 124
Q ss_pred cCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccc--c-ceeEEEEccCCCCEEEEEeCCCcE
Q psy14817 52 RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHN--Q-DVNCVAWNPVVPGMLASCSDDGDV 128 (138)
Q Consensus 52 ~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~v~~~~~~~~~~~~l~~~~~d~~v 128 (138)
...+.+.|+|+|+.++.+...+.+.+.|...+. ....+..+. . -.....|.|+ ++++++|+.||.|
T Consensus 188 ~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~----------~~~tfs~~~~~~~~~~~a~ftPd-s~Fvl~gs~dg~i 256 (311)
T KOG1446|consen 188 AEWTDLEFSPDGKSILLSTNASFIYLLDAFDGT----------VKSTFSGYPNAGNLPLSATFTPD-SKFVLSGSDDGTI 256 (311)
T ss_pred cceeeeEEcCCCCEEEEEeCCCcEEEEEccCCc----------EeeeEeeccCCCCcceeEEECCC-CcEEEEecCCCcE
Confidence 567899999999999988899999999988776 222121221 1 2246678999 9999999999999
Q ss_pred EEEEcCCCC
Q psy14817 129 KLWQIKLEN 137 (138)
Q Consensus 129 ~~wd~~~~~ 137 (138)
.+|+++++.
T Consensus 257 ~vw~~~tg~ 265 (311)
T KOG1446|consen 257 HVWNLETGK 265 (311)
T ss_pred EEEEcCCCc
Confidence 999998764
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.4e-14 Score=98.06 Aligned_cols=106 Identities=25% Similarity=0.361 Sum_probs=90.1
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
++.+++++.+|.+++||+.... .+..+.. ...+.++.++.....++.+..|-.|+++|.....
T Consensus 505 n~~~vsa~~~Gilkfw~f~~k~---------------l~~~l~l--~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~k 567 (910)
T KOG1539|consen 505 NRLLVSAGADGILKFWDFKKKV---------------LKKSLRL--GSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRK 567 (910)
T ss_pred CceEEEccCcceEEEEecCCcc---------------eeeeecc--CCCcceeeeeehhhhhhhhcCceeEEEEEchhhh
Confidence 4679999999999999975432 2444443 4578888888888899999999999999998776
Q ss_pred CCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCCC
Q psy14817 85 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 138 (138)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~ 138 (138)
+.+.+.+|.+.|++++|+|+ +++|++++.|++|++||+.++.+
T Consensus 568 ----------vvR~f~gh~nritd~~FS~D-grWlisasmD~tIr~wDlpt~~l 610 (910)
T KOG1539|consen 568 ----------VVREFWGHGNRITDMTFSPD-GRWLISASMDSTIRTWDLPTGTL 610 (910)
T ss_pred ----------hhHHhhccccceeeeEeCCC-CcEEEEeecCCcEEEEeccCcce
Confidence 67778899999999999999 99999999999999999988753
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.4e-14 Score=95.63 Aligned_cols=112 Identities=19% Similarity=0.352 Sum_probs=90.2
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
.+.|+.+.+||.|.++|.....-. .....+..... |...|..+.|.|....|++++.|.++++||+....
T Consensus 64 eHiLavadE~G~i~l~dt~~~~fr---------~ee~~lk~~~a-H~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~ 133 (720)
T KOG0321|consen 64 EHILAVADEDGGIILFDTKSIVFR---------LEERQLKKPLA-HKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSR 133 (720)
T ss_pred cceEEEecCCCceeeecchhhhcc---------hhhhhhccccc-ccceeEeeccCCCceeEEEccCCceeeeeeeccce
Confidence 468999999999999997543221 00112344555 89999999999955699999999999999999876
Q ss_pred CCCceeeeeeee--eeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 85 GDSDMVSFDLVH--TEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 85 ~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+. ..+.+|...|.+++|.|.+...|++|+.||.|.|||+|..
T Consensus 134 ----------l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n 177 (720)
T KOG0321|consen 134 ----------LVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCN 177 (720)
T ss_pred ----------eecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEecc
Confidence 22 2356999999999999998899999999999999999864
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.5e-14 Score=87.09 Aligned_cols=113 Identities=20% Similarity=0.395 Sum_probs=95.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|..+.|++|+.|+.-.+|.... ...|++...+.. +....++|.|+|.+..|+.|+....|.||-+
T Consensus 63 Wap~snrIvtcs~drnayVw~~~~------------~~~WkptlvLlR-iNrAAt~V~WsP~enkFAVgSgar~isVcy~ 129 (361)
T KOG1523|consen 63 WAPKSNRIVTCSHDRNAYVWTQPS------------GGTWKPTLVLLR-INRAATCVKWSPKENKFAVGSGARLISVCYY 129 (361)
T ss_pred ecCCCCceeEccCCCCccccccCC------------CCeeccceeEEE-eccceeeEeecCcCceEEeccCccEEEEEEE
Confidence 578899999999999999999642 456777777777 7889999999999999999999999999988
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
+... .+....++.+.++..|++++|+|+ +-+++.|+.|++.++|..
T Consensus 130 E~EN------dWWVsKhikkPirStv~sldWhpn-nVLlaaGs~D~k~rVfSa 175 (361)
T KOG1523|consen 130 EQEN------DWWVSKHIKKPIRSTVTSLDWHPN-NVLLAAGSTDGKCRVFSA 175 (361)
T ss_pred eccc------ceehhhhhCCccccceeeeeccCC-cceecccccCcceeEEEE
Confidence 7543 344444555678889999999999 999999999999999964
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.1e-13 Score=87.33 Aligned_cols=77 Identities=18% Similarity=0.317 Sum_probs=63.1
Q ss_pred ccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecc----cccceeEEEEccCCCCEEEEEeCCC
Q psy14817 51 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRA----HNQDVNCVAWNPVVPGMLASCSDDG 126 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~~~d~ 126 (138)
.+.|+++..++++..+++++.|.++.+.|++... +...+.+ .....+.+.|+|+ +.++++|+.||
T Consensus 341 gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~e----------I~~~~sA~g~k~asDwtrvvfSpd-~~YvaAGS~dg 409 (459)
T KOG0288|consen 341 GGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKE----------IRQTFSAEGFKCASDWTRVVFSPD-GSYVAAGSADG 409 (459)
T ss_pred CcceeeEeeccCCeEEeeecCCCceeeeeccccc----------EEEEeeccccccccccceeEECCC-CceeeeccCCC
Confidence 4589999999999999999999999999999765 2222211 1234788999999 99999999999
Q ss_pred cEEEEEcCCCCC
Q psy14817 127 DVKLWQIKLENL 138 (138)
Q Consensus 127 ~v~~wd~~~~~~ 138 (138)
.|+||++.++++
T Consensus 410 sv~iW~v~tgKl 421 (459)
T KOG0288|consen 410 SVYIWSVFTGKL 421 (459)
T ss_pred cEEEEEccCceE
Confidence 999999988764
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.7e-13 Score=92.03 Aligned_cols=126 Identities=19% Similarity=0.315 Sum_probs=93.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCC-CCCCCccCCCCC----------------CceEEeEEecCC--------CccCeE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKP-GNSAGIPTPDND----------------SVWKCVCTLSGH--------HGRTIY 55 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~-~~~~~~~~~~~~----------------~~~~~~~~~~~~--------~~~~v~ 55 (138)
|-|+|++|.+|+.||.|++|+.... ..+..+...+.. ..-.+++.+... ..-++.
T Consensus 21 ~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~~~iL~Rftlp~r 100 (933)
T KOG1274|consen 21 YDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYSNHFLTGSEQNTVLRYKFPSGEEDTILARFTLPIR 100 (933)
T ss_pred EcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeecccceEEeeccceEEEeeCCCCCccceeeeeeccce
Confidence 4588999999999999999997655 222221101100 000111122110 234688
Q ss_pred EEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 56 DISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 56 ~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
+++++-+|.+++.|+.|-.|++-+..... ....+.+|..+|.++.++|. +.+|++.+.||+|++||+..
T Consensus 101 ~~~v~g~g~~iaagsdD~~vK~~~~~D~s----------~~~~lrgh~apVl~l~~~p~-~~fLAvss~dG~v~iw~~~~ 169 (933)
T KOG1274|consen 101 DLAVSGSGKMIAAGSDDTAVKLLNLDDSS----------QEKVLRGHDAPVLQLSYDPK-GNFLAVSSCDGKVQIWDLQD 169 (933)
T ss_pred EEEEecCCcEEEeecCceeEEEEeccccc----------hheeecccCCceeeeeEcCC-CCEEEEEecCceEEEEEccc
Confidence 99999999999999999999999988776 55666799999999999999 99999999999999999987
Q ss_pred CC
Q psy14817 136 EN 137 (138)
Q Consensus 136 ~~ 137 (138)
+.
T Consensus 170 ~~ 171 (933)
T KOG1274|consen 170 GI 171 (933)
T ss_pred ch
Confidence 65
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.2e-14 Score=88.08 Aligned_cols=73 Identities=18% Similarity=0.337 Sum_probs=68.2
Q ss_pred eEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 54 IYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 54 v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
..|+.|++-|.+++.|+.||.|.|||+.+.. +.+.+.+|..+|.+++|+++ ++.|++++.|..+.+||+
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~----------iar~lsaH~~pi~sl~WS~d-gr~LltsS~D~si~lwDl 94 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFR----------IARMLSAHVRPITSLCWSRD-GRKLLTSSRDWSIKLWDL 94 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccc----------hhhhhhccccceeEEEecCC-CCEeeeecCCceeEEEec
Confidence 7899999999999999999999999999876 66777899999999999999 999999999999999999
Q ss_pred CCCC
Q psy14817 134 KLEN 137 (138)
Q Consensus 134 ~~~~ 137 (138)
..+.
T Consensus 95 ~~gs 98 (405)
T KOG1273|consen 95 LKGS 98 (405)
T ss_pred cCCC
Confidence 8775
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=1e-13 Score=89.68 Aligned_cols=110 Identities=15% Similarity=0.252 Sum_probs=87.9
Q ss_pred CccCC-CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEE
Q psy14817 1 MIQTG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~-~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~ 78 (138)
|||.. .+|.+++++|.|.+||.....+ +..+...|..+...|+|+|..+ +|++.+.|..|.+|
T Consensus 172 ys~skr~lL~~asd~G~VtlwDv~g~sp---------------~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~y 236 (673)
T KOG4378|consen 172 YSPSKRFLLSIASDKGAVTLWDVQGMSP---------------IFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIY 236 (673)
T ss_pred cccccceeeEeeccCCeEEEEeccCCCc---------------ccchhhhccCCcCcceecCCccceEEEecccceEEEe
Confidence 35544 4678999999999999865533 4445555899999999999887 88999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|+.... ...+ .....+...++|.++ +.+|+.|+..|.|..||+|..+
T Consensus 237 D~~s~~---------s~~~--l~y~~Plstvaf~~~-G~~L~aG~s~G~~i~YD~R~~k 283 (673)
T KOG4378|consen 237 DIRSQA---------STDR--LTYSHPLSTVAFSEC-GTYLCAGNSKGELIAYDMRSTK 283 (673)
T ss_pred eccccc---------ccce--eeecCCcceeeecCC-ceEEEeecCCceEEEEecccCC
Confidence 998543 1111 245568899999999 9999999999999999998753
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.1e-14 Score=90.23 Aligned_cols=124 Identities=21% Similarity=0.298 Sum_probs=89.5
Q ss_pred CccC--CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEE
Q psy14817 1 MIQT--GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~--~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i 77 (138)
|+|. -+.+|+|..-|.|-+||+....+ ...-+..+.. |..+|.++.|+|... .+++.+.||+|+.
T Consensus 194 fHPt~~~~lva~GdK~G~VG~Wn~~~~~~-----------d~d~v~~f~~-hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~ 261 (498)
T KOG4328|consen 194 FHPTENRKLVAVGDKGGQVGLWNFGTQEK-----------DKDGVYLFTP-HSGPVSGLKFSPANTSQIYSSSYDGTIRL 261 (498)
T ss_pred ecccCcceEEEEccCCCcEEEEecCCCCC-----------ccCceEEecc-CCccccceEecCCChhheeeeccCceeee
Confidence 4553 36899999999999999963222 1122555666 899999999999886 8999999999999
Q ss_pred EeccCCCC---------------------CC---------ceeeeeee-----eeeecccccceeEEEEccCCCCEEEEE
Q psy14817 78 FKENPEAG---------------------DS---------DMVSFDLV-----HTEHRAHNQDVNCVAWNPVVPGMLASC 122 (138)
Q Consensus 78 ~~~~~~~~---------------------~~---------~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~l~~~ 122 (138)
-|+....- .. ....+... .-...-|...|..++++|....+++++
T Consensus 262 ~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~ 341 (498)
T KOG4328|consen 262 QDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATA 341 (498)
T ss_pred eeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeec
Confidence 99986530 00 00000000 011124567899999999878899999
Q ss_pred eCCCcEEEEEcCCC
Q psy14817 123 SDDGDVKLWQIKLE 136 (138)
Q Consensus 123 ~~d~~v~~wd~~~~ 136 (138)
+.|++.+|||+|.-
T Consensus 342 s~D~T~kIWD~R~l 355 (498)
T KOG4328|consen 342 SLDQTAKIWDLRQL 355 (498)
T ss_pred ccCcceeeeehhhh
Confidence 99999999999863
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.3e-15 Score=101.32 Aligned_cols=101 Identities=33% Similarity=0.582 Sum_probs=89.8
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccC
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 82 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~ 82 (138)
..|.+++||++|..++||...+. .|+..+.+ |.+.|+.++.+....++++++.|..|++|.+..
T Consensus 200 rtg~~Iitgsdd~lvKiwS~et~---------------~~lAs~rG-hs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~ 263 (1113)
T KOG0644|consen 200 RTGRYIITGSDDRLVKIWSMETA---------------RCLASCRG-HSGDITDLAVSSNNTMIAAASNDKVIRVWRLPD 263 (1113)
T ss_pred cccceEeecCccceeeeeeccch---------------hhhccCCC-CccccchhccchhhhhhhhcccCceEEEEecCC
Confidence 46899999999999999995433 56888999 999999999998888999999999999999998
Q ss_pred CCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 83 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
+. ...++.+|++.|++++|+|- . +.+.||++++||.+
T Consensus 264 ~~----------pvsvLrghtgavtaiafsP~-~----sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 264 GA----------PVSVLRGHTGAVTAIAFSPR-A----SSSDDGTCRIWDAR 300 (1113)
T ss_pred Cc----------hHHHHhccccceeeeccCcc-c----cCCCCCceEecccc
Confidence 76 66667799999999999997 3 77889999999987
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=8.1e-14 Score=87.83 Aligned_cols=118 Identities=19% Similarity=0.206 Sum_probs=87.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+++|..+++|+.||++|||+..... .+..... |...|.++.|+|+++.+++.+.| ..+||+.
T Consensus 152 f~~~gs~latgg~dg~lRv~~~Ps~~---------------t~l~e~~-~~~eV~DL~FS~dgk~lasig~d-~~~VW~~ 214 (398)
T KOG0771|consen 152 FNGDGSKLATGGTDGTLRVWEWPSML---------------TILEEIA-HHAEVKDLDFSPDGKFLASIGAD-SARVWSV 214 (398)
T ss_pred EcCCCCEeeeccccceEEEEecCcch---------------hhhhhHh-hcCccccceeCCCCcEEEEecCC-ceEEEEe
Confidence 57889999999999999999964433 2455555 78899999999999999999999 8999999
Q ss_pred cCCCCC--------------------C-c--eeeeee----------eeeee-----------cccccceeEEEEccCCC
Q psy14817 81 NPEAGD--------------------S-D--MVSFDL----------VHTEH-----------RAHNQDVNCVAWNPVVP 116 (138)
Q Consensus 81 ~~~~~~--------------------~-~--~~~~~~----------~~~~~-----------~~~~~~v~~~~~~~~~~ 116 (138)
..+... . . .+.... ..... ......|++++.+++ +
T Consensus 215 ~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~d-G 293 (398)
T KOG0771|consen 215 NTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDD-G 293 (398)
T ss_pred ccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCC-C
Confidence 987300 0 0 000000 00000 011247899999999 9
Q ss_pred CEEEEEeCCCcEEEEEcCCC
Q psy14817 117 GMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 117 ~~l~~~~~d~~v~~wd~~~~ 136 (138)
.+++.|+.||.|-+++...-
T Consensus 294 kf~AlGT~dGsVai~~~~~l 313 (398)
T KOG0771|consen 294 KFLALGTMDGSVAIYDAKSL 313 (398)
T ss_pred cEEEEeccCCcEEEEEecee
Confidence 99999999999999987654
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.1e-14 Score=85.69 Aligned_cols=78 Identities=19% Similarity=0.377 Sum_probs=63.3
Q ss_pred CccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEE
Q psy14817 50 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 129 (138)
Q Consensus 50 ~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~ 129 (138)
|+.-|..++|+.+..+|++|+.+..++|||++... .......+|.+.|..+.|... .+.+++...|++||
T Consensus 99 hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~---------App~E~~ghtg~Ir~v~wc~e-D~~iLSSadd~tVR 168 (334)
T KOG0278|consen 99 HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPK---------APPKEISGHTGGIRTVLWCHE-DKCILSSADDKTVR 168 (334)
T ss_pred hhheeeeEEecccchhhhccchHHHhhhhhccCCC---------CCchhhcCCCCcceeEEEecc-CceEEeeccCCceE
Confidence 56677888888888888888888888888887654 233344689999999999987 77778889999999
Q ss_pred EEEcCCCC
Q psy14817 130 LWQIKLEN 137 (138)
Q Consensus 130 ~wd~~~~~ 137 (138)
+||.+++.
T Consensus 169 LWD~rTgt 176 (334)
T KOG0278|consen 169 LWDHRTGT 176 (334)
T ss_pred EEEeccCc
Confidence 99999875
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.2e-13 Score=87.13 Aligned_cols=105 Identities=18% Similarity=0.256 Sum_probs=82.5
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC---CccCeEEEEEecCCCeEEEeeCCCcEEEE
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH---HGRTIYDISWCHLTDLIATACGDDAIRIF 78 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~v~~~~~~~~~~s~~~d~~i~i~ 78 (138)
+++|..+.+++.|.++.+.|++...- ..++... .....+.+.|+|++.++++|+.||.|+||
T Consensus 350 s~~g~~lLsssRDdtl~viDlRt~eI---------------~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW 414 (459)
T KOG0288|consen 350 SMDGLELLSSSRDDTLKVIDLRTKEI---------------RQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIW 414 (459)
T ss_pred ccCCeEEeeecCCCceeeeecccccE---------------EEEeeccccccccccceeEECCCCceeeeccCCCcEEEE
Confidence 67888999999999999999876532 2222210 12357889999999999999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecc-ccc-ceeEEEEccCCCCEEEEEeCCCcEEEEE
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRA-HNQ-DVNCVAWNPVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~-~~~-~v~~~~~~~~~~~~l~~~~~d~~v~~wd 132 (138)
++..++ +...... +.. .|+++.|+|. +..+++++.++.+.+|.
T Consensus 415 ~v~tgK----------lE~~l~~s~s~~aI~s~~W~~s-G~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 415 SVFTGK----------LEKVLSLSTSNAAITSLSWNPS-GSGLLSADKQKAVTLWT 459 (459)
T ss_pred EccCce----------EEEEeccCCCCcceEEEEEcCC-CchhhcccCCcceEecC
Confidence 999876 3333323 333 6999999998 99999999999999993
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.9e-13 Score=91.13 Aligned_cols=107 Identities=19% Similarity=0.255 Sum_probs=92.0
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC--CccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH--HGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
-|+.+++++++.|+.|+||++..... .+.|++. |.+....+...|.|-++++.+.|.++.++|
T Consensus 605 dp~~k~v~t~cQDrnirif~i~sgKq---------------~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~D 669 (1080)
T KOG1408|consen 605 DPTSKLVVTVCQDRNIRIFDIESGKQ---------------VKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVD 669 (1080)
T ss_pred CCCcceEEEEecccceEEEeccccce---------------eeeecccccCCCceEEEEECCCccEEEEeecCCceEEEE
Confidence 36788999999999999999865533 4555543 456788899999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
+..++ +.....+|...|+.+.|.++ ...|++++.||-|.+|.+.
T Consensus 670 f~sgE----------cvA~m~GHsE~VTG~kF~nD-CkHlISvsgDgCIFvW~lp 713 (1080)
T KOG1408|consen 670 FVSGE----------CVAQMTGHSEAVTGVKFLND-CKHLISVSGDGCIFVWKLP 713 (1080)
T ss_pred eccch----------hhhhhcCcchheeeeeeccc-chhheeecCCceEEEEECc
Confidence 99988 55555699999999999999 9999999999999999875
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.5e-12 Score=81.34 Aligned_cols=104 Identities=19% Similarity=0.303 Sum_probs=82.1
Q ss_pred CCeEEE--eeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCc-EEEEecc
Q psy14817 5 GSRLAT--CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDA-IRIFKEN 81 (138)
Q Consensus 5 ~~~l~t--~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~-i~i~~~~ 81 (138)
+.++|- ....|.|.+||... .+++..+.. |++.+-+++|+++|.+++++++.|+ |||+.+.
T Consensus 141 n~ylAyp~s~t~GdV~l~d~~n---------------l~~v~~I~a-H~~~lAalafs~~G~llATASeKGTVIRVf~v~ 204 (391)
T KOG2110|consen 141 NCYLAYPGSTTSGDVVLFDTIN---------------LQPVNTINA-HKGPLAALAFSPDGTLLATASEKGTVIRVFSVP 204 (391)
T ss_pred CceEEecCCCCCceEEEEEccc---------------ceeeeEEEe-cCCceeEEEECCCCCEEEEeccCceEEEEEEcC
Confidence 345552 23468999999633 355778887 9999999999999999999999998 8899998
Q ss_pred CCCCCCceeeeeeeeeeeccc--ccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAH--NQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
.++ ....++.. ...|.+++|+|+ .++|+..+..++|++|-+..
T Consensus 205 ~G~----------kl~eFRRG~~~~~IySL~Fs~d-s~~L~~sS~TeTVHiFKL~~ 249 (391)
T KOG2110|consen 205 EGQ----------KLYEFRRGTYPVSIYSLSFSPD-SQFLAASSNTETVHIFKLEK 249 (391)
T ss_pred Ccc----------EeeeeeCCceeeEEEEEEECCC-CCeEEEecCCCeEEEEEecc
Confidence 776 33222221 347889999999 99999999999999998764
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.2e-13 Score=84.34 Aligned_cols=121 Identities=22% Similarity=0.328 Sum_probs=88.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCC-------------CCCC----------------ceEEeEEecCC--
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTP-------------DNDS----------------VWKCVCTLSGH-- 49 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~-------------~~~~----------------~~~~~~~~~~~-- 49 (138)
|+++|++++++|.||+|++|+............. .+.+ ..+.+..+...
T Consensus 356 ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvVrsfsSGkR 435 (508)
T KOG0275|consen 356 FTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVRSFSSGKR 435 (508)
T ss_pred EcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceEEeeeccCCc
Confidence 6789999999999999999997544322211111 1100 11222222220
Q ss_pred CccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEE
Q psy14817 50 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 129 (138)
Q Consensus 50 ~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~ 129 (138)
..+...+...+|.|.++.+.+.|+.++.|....+. ..+...-|...+..++-+|. .+.+++-+.||.++
T Consensus 436 EgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~----------LE~tl~VhEkdvIGl~HHPH-qNllAsYsEDgllK 504 (508)
T KOG0275|consen 436 EGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGK----------LERTLPVHEKDVIGLTHHPH-QNLLASYSEDGLLK 504 (508)
T ss_pred cCCceEEEEecCCCcEEEEEccCcEEEEEEeecCc----------eeeeeecccccccccccCcc-cchhhhhcccchhh
Confidence 23456677789999999999999999999988877 55556678888999999998 99999999999999
Q ss_pred EEE
Q psy14817 130 LWQ 132 (138)
Q Consensus 130 ~wd 132 (138)
+|.
T Consensus 505 LWk 507 (508)
T KOG0275|consen 505 LWK 507 (508)
T ss_pred hcC
Confidence 994
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.8e-13 Score=95.20 Aligned_cols=127 Identities=20% Similarity=0.309 Sum_probs=85.0
Q ss_pred CccC-CCeEEEeeCCCcEEEeeccCCCCCCCccCC-------------------------CCCC-----ceEEeEEecCC
Q psy14817 1 MIQT-GSRLATCSDDATVKIWKEYKPGNSAGIPTP-------------------------DNDS-----VWKCVCTLSGH 49 (138)
Q Consensus 1 ~s~~-~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~-------------------------~~~~-----~~~~~~~~~~~ 49 (138)
|++. +++||+|+.||.|.|||+.+...+...... +... ..+++..+..
T Consensus 124 fN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~- 202 (1049)
T KOG0307|consen 124 FNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSD- 202 (1049)
T ss_pred ccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCccccccc-
Confidence 4554 469999999999999999775444321100 0000 0012222222
Q ss_pred Cc--cCeEEEEEecCCC-eEEEeeCCC---cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe
Q psy14817 50 HG--RTIYDISWCHLTD-LIATACGDD---AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 123 (138)
Q Consensus 50 ~~--~~v~~v~~~~~~~-~~~s~~~d~---~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 123 (138)
+. ..+..+.|+|+.. .+++++.|. .|.+||++... ...+.+..|...|.++.|++.+..++++++
T Consensus 203 ~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~as---------sP~k~~~~H~~GilslsWc~~D~~lllSsg 273 (1049)
T KOG0307|consen 203 TPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFAS---------SPLKILEGHQRGILSLSWCPQDPRLLLSSG 273 (1049)
T ss_pred CCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccC---------CchhhhcccccceeeeccCCCCchhhhccc
Confidence 21 3466788888775 455554433 48888877544 244555689999999999998578999999
Q ss_pred CCCcEEEEEcCCCC
Q psy14817 124 DDGDVKLWQIKLEN 137 (138)
Q Consensus 124 ~d~~v~~wd~~~~~ 137 (138)
.|+.|.+|+.++++
T Consensus 274 kD~~ii~wN~~tgE 287 (1049)
T KOG0307|consen 274 KDNRIICWNPNTGE 287 (1049)
T ss_pred CCCCeeEecCCCce
Confidence 99999999999876
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.9e-13 Score=86.44 Aligned_cols=111 Identities=15% Similarity=0.248 Sum_probs=85.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~ 79 (138)
|+.+.+.+..+..=|...+||.+....+ ...+.. |...|.+|+++|-.+ ++++++.|++++|||
T Consensus 287 ~~~e~~~vl~~~~~G~f~~iD~R~~~s~--------------~~~~~l-h~kKI~sv~~NP~~p~~laT~s~D~T~kIWD 351 (498)
T KOG4328|consen 287 FSAESRSVLFGDNVGNFNVIDLRTDGSE--------------YENLRL-HKKKITSVALNPVCPWFLATASLDQTAKIWD 351 (498)
T ss_pred ccCCCccEEEeecccceEEEEeecCCcc--------------chhhhh-hhcccceeecCCCCchheeecccCcceeeee
Confidence 3455566666777779999998876543 233444 777999999999887 899999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
++....... + .. ....|+..|.+..|+|. +..|++.+.|..|+|||.
T Consensus 352 ~R~l~~K~s-p----~l-st~~HrrsV~sAyFSPs-~gtl~TT~~D~~IRv~ds 398 (498)
T KOG4328|consen 352 LRQLRGKAS-P----FL-STLPHRRSVNSAYFSPS-GGTLLTTCQDNEIRVFDS 398 (498)
T ss_pred hhhhcCCCC-c----ce-ecccccceeeeeEEcCC-CCceEeeccCCceEEeec
Confidence 997653222 1 12 23479999999999999 555999999999999997
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=2e-14 Score=99.70 Aligned_cols=112 Identities=21% Similarity=0.378 Sum_probs=86.8
Q ss_pred eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEeccCCCC
Q psy14817 7 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPEAG 85 (138)
Q Consensus 7 ~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~ 85 (138)
.||.|.+||.|.+||...... ......+.+... |.+.|..+.|++.+. ++++|+.||.|.|||+...+.
T Consensus 82 lIaGG~edG~I~ly~p~~~~~---------~~~~~~la~~~~-h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~t 151 (1049)
T KOG0307|consen 82 LIAGGLEDGNIVLYDPASIIA---------NASEEVLATKSK-HTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPET 151 (1049)
T ss_pred eeeccccCCceEEecchhhcc---------CcchHHHhhhcc-cCCceeeeeccccCCceeeccCCCCcEEEeccCCcCC
Confidence 599999999999999754311 111233556666 899999999999987 999999999999999997541
Q ss_pred CCceeeeeeeeee-ecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 86 DSDMVSFDLVHTE-HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 86 ~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.... .......|.+++|+.....+|++++.+|...|||+|.++
T Consensus 152 ---------P~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~ 195 (1049)
T KOG0307|consen 152 ---------PFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKK 195 (1049)
T ss_pred ---------CCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCC
Confidence 1111 113456899999998757889999999999999999764
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.6e-13 Score=91.30 Aligned_cols=115 Identities=19% Similarity=0.295 Sum_probs=88.3
Q ss_pred Ccc-CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQ-TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~-~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+| ...+|||||.|..|+||.+........ . .+-..+.+ ....+-++.|+|...-|+..+..|++++||
T Consensus 87 FspF~D~LLAT~S~D~~VKiW~lp~g~~q~L-S--------ape~~~g~-~~~~vE~l~fHpTaDgil~s~a~g~v~i~D 156 (1012)
T KOG1445|consen 87 FSPFADELLATCSRDEPVKIWKLPRGHSQKL-S--------APEIDVGG-GNVIVECLRFHPTADGILASGAHGSVYITD 156 (1012)
T ss_pred ccccchhhhhcccCCCeeEEEecCCCccccc-C--------CcceeecC-CceEEEEeecccCcCceEEeccCceEEEEE
Confidence 455 456899999999999999863322111 0 11122222 455778999999888666666789999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+...+ ....+.+|...|.++.|+.+ +..+++++.|..|+|||.|..
T Consensus 157 ~stqk----------~~~el~~h~d~vQSa~WseD-G~llatscKdkqirifDPRa~ 202 (1012)
T KOG1445|consen 157 ISTQK----------TAVELSGHTDKVQSADWSED-GKLLATSCKDKQIRIFDPRAS 202 (1012)
T ss_pred cccCc----------eeecccCCchhhhccccccC-CceEeeecCCcceEEeCCccC
Confidence 99876 45556689999999999999 999999999999999998764
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.9e-12 Score=86.14 Aligned_cols=109 Identities=20% Similarity=0.416 Sum_probs=86.7
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
++..|++.+.+|.|.-||+.... +...+.. ..+.|++++.+|.+..++.|++||.+..++...+
T Consensus 79 e~~RLFS~g~sg~i~EwDl~~lk---------------~~~~~d~-~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~ 142 (691)
T KOG2048|consen 79 EGGRLFSSGLSGSITEWDLHTLK---------------QKYNIDS-NGGAIWSIAINPENTILAIGCDDGVLYDFSIGPD 142 (691)
T ss_pred cCCeEEeecCCceEEEEecccCc---------------eeEEecC-CCcceeEEEeCCccceEEeecCCceEEEEecCCc
Confidence 46677888899999999986553 3566665 6789999999999999999999997777766654
Q ss_pred CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 84 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
. .. ....+..++++|.+++|+|+ +..+++|+.||.|++||...+.
T Consensus 143 ~-----I~---~~r~l~rq~sRvLslsw~~~-~~~i~~Gs~Dg~Iriwd~~~~~ 187 (691)
T KOG2048|consen 143 K-----IT---YKRSLMRQKSRVLSLSWNPT-GTKIAGGSIDGVIRIWDVKSGQ 187 (691)
T ss_pred e-----EE---EEeecccccceEEEEEecCC-ccEEEecccCceEEEEEcCCCc
Confidence 3 11 12334456789999999999 9999999999999999987654
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=9.2e-13 Score=80.47 Aligned_cols=86 Identities=14% Similarity=0.201 Sum_probs=62.7
Q ss_pred ccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCC-CCCceeeeeeeeeeec--ccccceeEEEEccCCCCEEEEEeCCCc
Q psy14817 51 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEA-GDSDMVSFDLVHTEHR--AHNQDVNCVAWNPVVPGMLASCSDDGD 127 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d~~ 127 (138)
+-.+.||+..|.+.-++.++-||.|.+=.++... .....+.+++-..... ..-.+|++|+|+|- .+.|++|+.||.
T Consensus 177 kyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~-~~tfaTgGsDG~ 255 (323)
T KOG1036|consen 177 KYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPI-HGTFATGGSDGI 255 (323)
T ss_pred eeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccc-cceEEecCCCce
Confidence 4578999999988889999999998887666552 1123334433222111 11258999999999 999999999999
Q ss_pred EEEEEcCCCC
Q psy14817 128 VKLWQIKLEN 137 (138)
Q Consensus 128 v~~wd~~~~~ 137 (138)
|.+||+...+
T Consensus 256 V~~Wd~~~rK 265 (323)
T KOG1036|consen 256 VNIWDLFNRK 265 (323)
T ss_pred EEEccCcchh
Confidence 9999987643
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=2e-13 Score=90.93 Aligned_cols=96 Identities=25% Similarity=0.439 Sum_probs=81.1
Q ss_pred eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCC
Q psy14817 7 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 86 (138)
Q Consensus 7 ~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~ 86 (138)
.+++||.|.++++|.... +...+.+ |...|+++..-|.+ .+++|+.|.+|++|.-..
T Consensus 114 ~~iSgSWD~TakvW~~~~-----------------l~~~l~g-H~asVWAv~~l~e~-~~vTgsaDKtIklWk~~~---- 170 (745)
T KOG0301|consen 114 TLISGSWDSTAKVWRIGE-----------------LVYSLQG-HTASVWAVASLPEN-TYVTGSADKTIKLWKGGT---- 170 (745)
T ss_pred ceEecccccceEEecchh-----------------hhcccCC-cchheeeeeecCCC-cEEeccCcceeeeccCCc----
Confidence 389999999999999643 2445777 99999999998877 899999999999997642
Q ss_pred CceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 87 SDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
....+.+|...|+.+++.++ ..|++++.||.|+.|++..
T Consensus 171 --------~l~tf~gHtD~VRgL~vl~~--~~flScsNDg~Ir~w~~~g 209 (745)
T KOG0301|consen 171 --------LLKTFSGHTDCVRGLAVLDD--SHFLSCSNDGSIRLWDLDG 209 (745)
T ss_pred --------hhhhhccchhheeeeEEecC--CCeEeecCCceEEEEeccC
Confidence 45566799999999999875 6788999999999999844
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=5.3e-13 Score=86.97 Aligned_cols=121 Identities=14% Similarity=0.228 Sum_probs=85.9
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccC-----CCC--------CCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPT-----PDN--------DSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 71 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~-----~~~--------~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~ 71 (138)
...|..+-.+|.+.++|............ +.. .....++..+.- ..+.|+..+|+|||++|++.+.
T Consensus 232 ~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~-~~g~in~f~FS~DG~~LA~VSq 310 (636)
T KOG2394|consen 232 DSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHI-GEGSINEFAFSPDGKYLATVSQ 310 (636)
T ss_pred CceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEe-ccccccceeEcCCCceEEEEec
Confidence 34566677889999998643322221111 000 011123333333 3568999999999999999999
Q ss_pred CCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 72 DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 72 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
||.++||++...+ .....+..-+...|++|+|| +.++++|+.|-.|.||.+...+
T Consensus 311 DGfLRvF~fdt~e----------Llg~mkSYFGGLLCvcWSPD-GKyIvtGGEDDLVtVwSf~erR 365 (636)
T KOG2394|consen 311 DGFLRIFDFDTQE----------LLGVMKSYFGGLLCVCWSPD-GKYIVTGGEDDLVTVWSFEERR 365 (636)
T ss_pred CceEEEeeccHHH----------HHHHHHhhccceEEEEEcCC-ccEEEecCCcceEEEEEeccce
Confidence 9999999998765 33334445578999999999 9999999999999999987654
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=7e-13 Score=88.48 Aligned_cols=116 Identities=25% Similarity=0.368 Sum_probs=86.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|||||++|+++|.|+++.+|......... .. ....+. |..-|.+..|+|++.+|+++++|.+|++|..
T Consensus 580 FSpdg~~LLsvsRDRt~sl~~~~~~~~~e--------~~---fa~~k~-HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~ 647 (764)
T KOG1063|consen 580 FSPDGRYLLSVSRDRTVSLYEVQEDIKDE--------FR---FACLKA-HTRIIWDCSWSPDEKYFATASRDKKVKVWEE 647 (764)
T ss_pred ECCCCcEEEEeecCceEEeeeeecccchh--------hh---hccccc-cceEEEEcccCcccceeEEecCCceEEEEec
Confidence 79999999999999999999974432211 11 222445 8889999999999999999999999999988
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccC----CCCEEEEEeCCCcEEEEEcC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV----VPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~l~~~~~d~~v~~wd~~ 134 (138)
.... ....... ....+...|+.+++.|- ....++.|-..|.|.+|...
T Consensus 648 ~~~~---d~~i~~~---a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~ 699 (764)
T KOG1063|consen 648 PDLR---DKYISRF---ACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRK 699 (764)
T ss_pred cCch---hhhhhhh---chhccCCceeeEEeeccccccccceEEEEecccEEEEEecc
Confidence 8653 1111110 22357789999998763 23367788889999999854
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.1e-12 Score=90.17 Aligned_cols=125 Identities=20% Similarity=0.334 Sum_probs=90.4
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
++++.+|+|||.||+|++|+.+..... ....++..++.. ....+.++.+.+.+..++.++.||.|++.+++
T Consensus 1058 ~~~~s~FvsgS~DGtVKvW~~~k~~~~--------~~s~rS~ltys~-~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id 1128 (1431)
T KOG1240|consen 1058 SEHTSLFVSGSDDGTVKVWNLRKLEGE--------GGSARSELTYSP-EGSRVEKVTMCGNGDQFAVSTKDGSVRVLRID 1128 (1431)
T ss_pred CCCCceEEEecCCceEEEeeehhhhcC--------cceeeeeEEEec-cCCceEEEEeccCCCeEEEEcCCCeEEEEEcc
Confidence 356689999999999999998776542 234455555554 46789999999999999999999999999998
Q ss_pred CCCCC----------------------------Cc-ee----------eeeeee------eeecccccceeEEEEccCCC
Q psy14817 82 PEAGD----------------------------SD-MV----------SFDLVH------TEHRAHNQDVNCVAWNPVVP 116 (138)
Q Consensus 82 ~~~~~----------------------------~~-~~----------~~~~~~------~~~~~~~~~v~~~~~~~~~~ 116 (138)
..... .. .. .+.... .......+.|++++.+|. +
T Consensus 1129 ~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~-~ 1207 (1431)
T KOG1240|consen 1129 HYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPW-C 1207 (1431)
T ss_pred ccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCC-c
Confidence 73200 00 00 000000 001123468999999999 9
Q ss_pred CEEEEEeCCCcEEEEEcCCC
Q psy14817 117 GMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 117 ~~l~~~~~d~~v~~wd~~~~ 136 (138)
+++++|+..|.+.+||+|=+
T Consensus 1208 ~WlviGts~G~l~lWDLRF~ 1227 (1431)
T KOG1240|consen 1208 NWLVIGTSRGQLVLWDLRFR 1227 (1431)
T ss_pred eEEEEecCCceEEEEEeecC
Confidence 99999999999999999854
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.5e-12 Score=78.32 Aligned_cols=70 Identities=24% Similarity=0.368 Sum_probs=64.4
Q ss_pred CeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEE
Q psy14817 53 TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 53 ~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd 132 (138)
.+..++.-||++.+++++=|+.|+||.-+... ....++.|...|++++|+|+ ..+++.+++|+.|-+|+
T Consensus 253 Gv~gvrIRpD~KIlATAGWD~RiRVyswrtl~----------pLAVLkyHsagvn~vAfspd-~~lmAaaskD~rISLWk 321 (323)
T KOG0322|consen 253 GVSGVRIRPDGKILATAGWDHRIRVYSWRTLN----------PLAVLKYHSAGVNAVAFSPD-CELMAAASKDARISLWK 321 (323)
T ss_pred CccceEEccCCcEEeecccCCcEEEEEeccCC----------chhhhhhhhcceeEEEeCCC-CchhhhccCCceEEeee
Confidence 46778889999999999999999999999887 66777899999999999999 99999999999999998
Q ss_pred c
Q psy14817 133 I 133 (138)
Q Consensus 133 ~ 133 (138)
+
T Consensus 322 L 322 (323)
T KOG0322|consen 322 L 322 (323)
T ss_pred c
Confidence 6
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.3e-13 Score=88.38 Aligned_cols=114 Identities=19% Similarity=0.232 Sum_probs=87.0
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
.+|.|..|+.|+.|+.++.+|+.-.. ++.+++.. |...++.|+|++..++|++|+.|+++.|+--
T Consensus 615 ihp~GDnli~gs~d~k~~WfDldlss--------------kPyk~lr~-H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg 679 (733)
T KOG0650|consen 615 IHPNGDNLILGSYDKKMCWFDLDLSS--------------KPYKTLRL-HEKAVRSVAFHKRYPLFASGSDDGTVIVFHG 679 (733)
T ss_pred ecCCCCeEEEecCCCeeEEEEcccCc--------------chhHHhhh-hhhhhhhhhhccccceeeeecCCCcEEEEee
Confidence 36889999999999999999984332 44667776 8999999999999999999999999999844
Q ss_pred cCCCCCCceeeeeeeeeeeccccc----ceeEEEEccCCCCEEEEEeCCCcEEEE
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQ----DVNCVAWNPVVPGMLASCSDDGDVKLW 131 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~~l~~~~~d~~v~~w 131 (138)
..... ....+.-.....+.+|.. .|....|+|. ..+|++++.||+|++|
T Consensus 680 ~VY~D-l~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~-qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 680 MVYND-LLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPR-QPWLFSAGADGTIRLF 732 (733)
T ss_pred eeehh-hhcCCceEeeeeccCceeecccceEeecccCC-CceEEecCCCceEEee
Confidence 33220 011111122333446654 4889999999 9999999999999998
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.6e-12 Score=83.36 Aligned_cols=112 Identities=15% Similarity=0.276 Sum_probs=90.5
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEec
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKE 80 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~ 80 (138)
+....+||+++..|-|.|..+....+ ..++.......|.-+.|++..+ +|.+++++|.|.+||+
T Consensus 130 N~~DeyiAsvs~gGdiiih~~~t~~~---------------tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv 194 (673)
T KOG4378|consen 130 NNTDEYIASVSDGGDIIIHGTKTKQK---------------TTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDV 194 (673)
T ss_pred cCCcceeEEeccCCcEEEEecccCcc---------------ccceecCCCCeEEEeecccccceeeEeeccCCeEEEEec
Confidence 45678999999999999999766544 2233321245667899999887 7788999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.... ........|..+...++|+|.+..+|++.+.|..|.+||++.+.
T Consensus 195 ~g~s---------p~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~ 242 (673)
T KOG4378|consen 195 QGMS---------PIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQA 242 (673)
T ss_pred cCCC---------cccchhhhccCCcCcceecCCccceEEEecccceEEEeeccccc
Confidence 9766 34556678999999999999878899999999999999998654
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.8e-12 Score=80.05 Aligned_cols=109 Identities=22% Similarity=0.311 Sum_probs=80.4
Q ss_pred Ccc-CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC-CCcEEEE
Q psy14817 1 MIQ-TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-DDAIRIF 78 (138)
Q Consensus 1 ~s~-~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~-d~~i~i~ 78 (138)
||| +...+|.|+...++-|+.-. ...++..+-+ |.+.|+.++|+++|..|++|.+ |..|..|
T Consensus 215 ~sP~~~~~~a~gsY~q~~giy~~~---------------~~~pl~llgg-h~gGvThL~~~edGn~lfsGaRk~dkIl~W 278 (406)
T KOG2919|consen 215 FSPMDSKTLAVGSYGQRVGIYNDD---------------GRRPLQLLGG-HGGGVTHLQWCEDGNKLFSGARKDDKILCW 278 (406)
T ss_pred ccCCCCcceeeecccceeeeEecC---------------CCCceeeecc-cCCCeeeEEeccCcCeecccccCCCeEEEE
Confidence 466 44589999999888888732 2245677777 8999999999999999888875 6689999
Q ss_pred eccCCCCCCceeeeeeeeeeeccccc---ceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQ---DVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
|++... -+...+..|.. .-.-....|. +++|++|+.||.|++||++.
T Consensus 279 DiR~~~---------~pv~~L~rhv~~TNQRI~FDld~~-~~~LasG~tdG~V~vwdlk~ 328 (406)
T KOG2919|consen 279 DIRYSR---------DPVYALERHVGDTNQRILFDLDPK-GEILASGDTDGSVRVWDLKD 328 (406)
T ss_pred eehhcc---------chhhhhhhhccCccceEEEecCCC-CceeeccCCCccEEEEecCC
Confidence 999654 11222223332 2222345677 99999999999999999876
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.3e-12 Score=78.56 Aligned_cols=116 Identities=19% Similarity=0.292 Sum_probs=81.9
Q ss_pred CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEeccCCC
Q psy14817 6 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 6 ~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~ 84 (138)
.+|||++ ..+|+|.+........... ........++..++++..|+.-.+ ++.+++-|.++.|||+..+.
T Consensus 114 dlLATs~--D~LRlWri~~ee~~~~~~~-------~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~ 184 (364)
T KOG0290|consen 114 DLLATSS--DFLRLWRIGDEESRVELQS-------VLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGV 184 (364)
T ss_pred chhhccc--CeEEEEeccCcCCceehhh-------hhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeecc
Confidence 4677664 5899999854322111000 000011222567899999998665 89999999999999999763
Q ss_pred CCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 85 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.. .....+-+|...|..++|.....++|++++.||++|+||+|..+
T Consensus 185 ---~~----~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~le 230 (364)
T KOG0290|consen 185 ---SG----TVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLE 230 (364)
T ss_pred ---cc----ceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccc
Confidence 00 13444558999999999998757799999999999999998754
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.3e-13 Score=84.13 Aligned_cols=89 Identities=26% Similarity=0.570 Sum_probs=72.8
Q ss_pred EecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe
Q psy14817 45 TLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 123 (138)
Q Consensus 45 ~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 123 (138)
.+.+ |+++|..+.|+|... .|++|+.|.+|.||++........ .......+.+|...|--++|+|.-.+.|++++
T Consensus 76 ~v~G-Ht~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~---ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag 151 (472)
T KOG0303|consen 76 LVCG-HTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRD---LTEPVVELYGHQRRVGLVQWHPTAPNVLLSAG 151 (472)
T ss_pred CccC-ccccccccccCccCCceeecCCCCceEEEEECCCcccccC---cccceEEEeecceeEEEEeecccchhhHhhcc
Confidence 3456 999999999999876 899999999999999986541111 11234445689999999999998678999999
Q ss_pred CCCcEEEEEcCCCC
Q psy14817 124 DDGDVKLWQIKLEN 137 (138)
Q Consensus 124 ~d~~v~~wd~~~~~ 137 (138)
.|.+|.+|++.+++
T Consensus 152 ~Dn~v~iWnv~tge 165 (472)
T KOG0303|consen 152 SDNTVSIWNVGTGE 165 (472)
T ss_pred CCceEEEEeccCCc
Confidence 99999999998875
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.2e-11 Score=77.58 Aligned_cols=110 Identities=13% Similarity=0.053 Sum_probs=74.4
Q ss_pred CccCCCeEE-EeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC----CC--ccCeEEEEEecCCCeEE-EeeCC
Q psy14817 1 MIQTGSRLA-TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG----HH--GRTIYDISWCHLTDLIA-TACGD 72 (138)
Q Consensus 1 ~s~~~~~l~-t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~v~~v~~~~~~~~~~-s~~~d 72 (138)
|+|++++|+ ++..++.|.+||+..... +..+.. .+ ......+.|+|++..++ +...+
T Consensus 164 ~s~dg~~l~~~~~~~~~v~i~d~~~~~~---------------~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~ 228 (300)
T TIGR03866 164 FTADGKELWVSSEIGGTVSVIDVATRKV---------------IKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPA 228 (300)
T ss_pred ECCCCCEEEEEcCCCCEEEEEEcCccee---------------eeeeeecccccccccCCccceEECCCCCEEEEEcCCC
Confidence 578898775 555699999999864322 222211 01 11235688999999644 44456
Q ss_pred CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEE-eCCCcEEEEEcCCCC
Q psy14817 73 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC-SDDGDVKLWQIKLEN 137 (138)
Q Consensus 73 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~d~~v~~wd~~~~~ 137 (138)
+.+.+||+...+ ..... .+...+.+++|+|+ +..|+++ ..++.|++||+++++
T Consensus 229 ~~i~v~d~~~~~----------~~~~~-~~~~~~~~~~~~~~-g~~l~~~~~~~~~i~v~d~~~~~ 282 (300)
T TIGR03866 229 NRVAVVDAKTYE----------VLDYL-LVGQRVWQLAFTPD-EKYLLTTNGVSNDVSVIDVAALK 282 (300)
T ss_pred CeEEEEECCCCc----------EEEEE-EeCCCcceEEECCC-CCEEEEEcCCCCeEEEEECCCCc
Confidence 689999987654 22111 23457889999999 8888776 468999999998875
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.43 E-value=4.9e-12 Score=79.55 Aligned_cols=108 Identities=17% Similarity=0.212 Sum_probs=93.0
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
...||+++.-+.||+||.++.- +|+..+.. -..+++++...|.+..+++|..-+.+..||++.+.
T Consensus 216 ~~~fat~T~~hqvR~YDt~~qR--------------RPV~~fd~-~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~k 280 (412)
T KOG3881|consen 216 NYKFATITRYHQVRLYDTRHQR--------------RPVAQFDF-LENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGK 280 (412)
T ss_pred CceEEEEecceeEEEecCcccC--------------cceeEecc-ccCcceeeeecCCCcEEEEecccchhheecccCce
Confidence 5789999999999999986332 55777776 57799999999999999999999999999999876
Q ss_pred CCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 85 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.....+.+..+.|+++..+|. +.++++++-|..|||+|+++.+
T Consensus 281 ---------l~g~~~kg~tGsirsih~hp~-~~~las~GLDRyvRIhD~ktrk 323 (412)
T KOG3881|consen 281 ---------LLGCGLKGITGSIRSIHCHPT-HPVLASCGLDRYVRIHDIKTRK 323 (412)
T ss_pred ---------eeccccCCccCCcceEEEcCC-CceEEeeccceeEEEeecccch
Confidence 334445678899999999999 9999999999999999998854
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.1e-11 Score=79.55 Aligned_cols=118 Identities=16% Similarity=0.298 Sum_probs=82.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+.+++.|..++.+|.|.+||++.. .+++.+.....-.-++++.++++.++++|+..|.|.|||.
T Consensus 352 fsSdsk~l~~~~~~GeV~v~nl~~~---------------~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~ 416 (514)
T KOG2055|consen 352 FSSDSKELLASGGTGEVYVWNLRQN---------------SCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDG 416 (514)
T ss_pred EecCCcEEEEEcCCceEEEEecCCc---------------ceEEEEeecCccceeeeeecCCCceEEeccCcceEEEecc
Confidence 5778898999999999999998654 4466665422223356677788999999999999999996
Q ss_pred cCCCCCC-----------------------------------ce------eeeeeeeeee--cccccceeEEEEccCCCC
Q psy14817 81 NPEAGDS-----------------------------------DM------VSFDLVHTEH--RAHNQDVNCVAWNPVVPG 117 (138)
Q Consensus 81 ~~~~~~~-----------------------------------~~------~~~~~~~~~~--~~~~~~v~~~~~~~~~~~ 117 (138)
....... +. +.++....+. ...-+.|+|++|+|. +.
T Consensus 417 ~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~-sG 495 (514)
T KOG2055|consen 417 NSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPN-SG 495 (514)
T ss_pred chhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCC-Cc
Confidence 6432000 00 0000000000 122357999999999 99
Q ss_pred EEEEEeCCCcEEEEEcC
Q psy14817 118 MLASCSDDGDVKLWQIK 134 (138)
Q Consensus 118 ~l~~~~~d~~v~~wd~~ 134 (138)
+++.|..+|.+.+|-+.
T Consensus 496 ~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 496 YLAVGNEAGRVHLFKLH 512 (514)
T ss_pred eEEeecCCCceeeEeec
Confidence 99999999999999875
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.2e-12 Score=83.66 Aligned_cols=107 Identities=21% Similarity=0.348 Sum_probs=79.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~ 79 (138)
|+|+|.-|+|+++||.|+||....+.+ .++.. ...+|.|++|.|+.. .+++.+ +.+.|=.
T Consensus 112 W~~dGtgLlt~GEDG~iKiWSrsGMLR----------------Stl~Q-~~~~v~c~~W~p~S~~vl~c~g--~h~~IKp 172 (737)
T KOG1524|consen 112 WSPDGAGLLTAGEDGVIKIWSRSGMLR----------------STVVQ-NEESIRCARWAPNSNSIVFCQG--GHISIKP 172 (737)
T ss_pred cCCCCceeeeecCCceEEEEeccchHH----------------HHHhh-cCceeEEEEECCCCCceEEecC--CeEEEee
Confidence 789999999999999999999644432 12222 456899999999987 444433 2355444
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.... .+.+ .++|.+-|.++.|++. .+++++|+.|-..++||.....
T Consensus 173 L~~n~---------k~i~-WkAHDGiiL~~~W~~~-s~lI~sgGED~kfKvWD~~G~~ 219 (737)
T KOG1524|consen 173 LAANS---------KIIR-WRAHDGLVLSLSWSTQ-SNIIASGGEDFRFKIWDAQGAN 219 (737)
T ss_pred ccccc---------ceeE-EeccCcEEEEeecCcc-ccceeecCCceeEEeecccCcc
Confidence 44322 1233 3589999999999999 9999999999999999976543
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.4e-11 Score=73.63 Aligned_cols=114 Identities=11% Similarity=0.176 Sum_probs=77.3
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccC
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 82 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~ 82 (138)
|..+.++.++.|+.+.-||++.. +...++++ |..-++++.--.....+++|+.||++++||.++
T Consensus 124 P~enSi~~AgGD~~~y~~dlE~G---------------~i~r~~rG-HtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt 187 (325)
T KOG0649|consen 124 PSENSILFAGGDGVIYQVDLEDG---------------RIQREYRG-HTDYVHSVVGRNANGQILSGAEDGTVRVWDTKT 187 (325)
T ss_pred cCCCcEEEecCCeEEEEEEecCC---------------EEEEEEcC-CcceeeeeeecccCcceeecCCCccEEEEeccc
Confidence 44555666668999999997543 55678889 999999998756677899999999999999998
Q ss_pred CCCCCceeeeeeeeeeeccc-ccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 83 EAGDSDMVSFDLVHTEHRAH-NQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.+........+.... .+.| ...|-+++.+ ..+++.|+ ...+.+|.++..+
T Consensus 188 ~k~v~~ie~yk~~~~-lRp~~g~wigala~~---edWlvCGg-Gp~lslwhLrsse 238 (325)
T KOG0649|consen 188 QKHVSMIEPYKNPNL-LRPDWGKWIGALAVN---EDWLVCGG-GPKLSLWHLRSSE 238 (325)
T ss_pred cceeEEeccccChhh-cCcccCceeEEEecc---CceEEecC-CCceeEEeccCCC
Confidence 762222111111111 1122 3456666653 45665554 5679999998764
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=1e-11 Score=78.31 Aligned_cols=125 Identities=18% Similarity=0.248 Sum_probs=90.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCc---------c-------C---------CCCCCce-------EEeEEecC
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGI---------P-------T---------PDNDSVW-------KCVCTLSG 48 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~---------~-------~---------~~~~~~~-------~~~~~~~~ 48 (138)
.+++++++|.+..+....+++++...+.... + . .++.... .+...+.+
T Consensus 70 ~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~~~~lG 149 (390)
T KOG3914|consen 70 TSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGRCEPILG 149 (390)
T ss_pred cCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccCcchhhh
Confidence 3678899999988888878887655431110 0 0 0000000 11122334
Q ss_pred CCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcE
Q psy14817 49 HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 128 (138)
Q Consensus 49 ~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v 128 (138)
|-..++.|+|+||+++++++..|..|++-...... .+.....+|+.-|..++.-++ +.|++++.|++|
T Consensus 150 -hvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f---------~IesfclGH~eFVS~isl~~~--~~LlS~sGD~tl 217 (390)
T KOG3914|consen 150 -HVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATF---------VIESFCLGHKEFVSTISLTDN--YLLLSGSGDKTL 217 (390)
T ss_pred -hhhhhheeeecCCCCEEEEecCCceEEEEecCccc---------chhhhccccHhheeeeeeccC--ceeeecCCCCcE
Confidence 77889999999999999999999999998777543 345556689999999998764 669999999999
Q ss_pred EEEEcCCCC
Q psy14817 129 KLWQIKLEN 137 (138)
Q Consensus 129 ~~wd~~~~~ 137 (138)
++||+++++
T Consensus 218 r~Wd~~sgk 226 (390)
T KOG3914|consen 218 RLWDITSGK 226 (390)
T ss_pred EEEecccCC
Confidence 999999876
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.2e-11 Score=76.24 Aligned_cols=115 Identities=17% Similarity=0.340 Sum_probs=94.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|++++..+|.+.....|.||..... ..|++..++.. |...|++|.|+|....|++++.|..-++|..
T Consensus 18 wn~drt~iAv~~~~~evhiy~~~~~------------~~w~~~htls~-Hd~~vtgvdWap~snrIvtcs~drnayVw~~ 84 (361)
T KOG1523|consen 18 WNSDRTQIAVSPNNHEVHIYSMLGA------------DLWEPAHTLSE-HDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQ 84 (361)
T ss_pred ecCCCceEEeccCCceEEEEEecCC------------CCceeceehhh-hCcceeEEeecCCCCceeEccCCCCcccccc
Confidence 5789999999999999999996432 23678899998 8999999999999999999999999999988
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
..+. .+..... +..+....+++.|+|. .+.|++|+....|.||-+.+.
T Consensus 85 ~~~~------~Wkptlv-LlRiNrAAt~V~WsP~-enkFAVgSgar~isVcy~E~E 132 (361)
T KOG1523|consen 85 PSGG------TWKPTLV-LLRINRAATCVKWSPK-ENKFAVGSGARLISVCYYEQE 132 (361)
T ss_pred CCCC------eecccee-EEEeccceeeEeecCc-CceEEeccCccEEEEEEEecc
Confidence 5432 1222222 2367788999999999 999999999999999987654
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=5.1e-12 Score=82.65 Aligned_cols=78 Identities=15% Similarity=0.251 Sum_probs=59.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
++++++.+.+|+-||+|+.|++.....+... .........+.+ |.+.++.+++++....|++++.||+++.|+.
T Consensus 352 v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds-----~dp~vl~~~l~G-htdavw~l~~s~~~~~Llscs~DgTvr~w~~ 425 (577)
T KOG0642|consen 352 VPSNGEHCYSGGIDGTIRCWNLPPNQDPDDS-----YDPSVLSGTLLG-HTDAVWLLALSSTKDRLLSCSSDGTVRLWEP 425 (577)
T ss_pred ecCCceEEEeeccCceeeeeccCCCCCcccc-----cCcchhccceec-cccceeeeeecccccceeeecCCceEEeecc
Confidence 4678999999999999999997622221110 011123456778 8999999999999999999999999999987
Q ss_pred cCCC
Q psy14817 81 NPEA 84 (138)
Q Consensus 81 ~~~~ 84 (138)
....
T Consensus 426 ~~~~ 429 (577)
T KOG0642|consen 426 TEES 429 (577)
T ss_pred CCcC
Confidence 7543
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=6.1e-13 Score=85.34 Aligned_cols=107 Identities=14% Similarity=0.163 Sum_probs=86.9
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
-|.--+|++++..|.++.-|+... +.+..+.. ..+.+..++-+|-+..+-.|...|+|.+|...
T Consensus 218 LPyHfLL~~~~~~G~L~Y~DVS~G---------------klVa~~~t-~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~ 281 (545)
T KOG1272|consen 218 LPYHFLLVAASEAGFLKYQDVSTG---------------KLVASIRT-GAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPN 281 (545)
T ss_pred cchhheeeecccCCceEEEeechh---------------hhhHHHHc-cCCccchhhcCCccceEEEcCCCceEEecCCC
Confidence 344557888888888888886443 33455554 46788889999999999999999999999887
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
..+ +......|.++|.++++.++ ++++++++.|..++|||+|.
T Consensus 282 ske----------PLvKiLcH~g~V~siAv~~~-G~YMaTtG~Dr~~kIWDlR~ 324 (545)
T KOG1272|consen 282 SKE----------PLVKILCHRGPVSSIAVDRG-GRYMATTGLDRKVKIWDLRN 324 (545)
T ss_pred Ccc----------hHHHHHhcCCCcceEEECCC-CcEEeecccccceeEeeecc
Confidence 655 34444589999999999999 99999999999999999985
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.39 E-value=7.4e-12 Score=77.36 Aligned_cols=127 Identities=17% Similarity=0.187 Sum_probs=85.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
+||+|+++|+++--.-|++|..--...- .......+..+.+ |+..|+..+|+++...+++.+.||+.++||.
T Consensus 236 vSP~GRFia~~gFTpDVkVwE~~f~kdG-------~fqev~rvf~LkG-H~saV~~~aFsn~S~r~vtvSkDG~wriwdt 307 (420)
T KOG2096|consen 236 VSPDGRFIAVSGFTPDVKVWEPIFTKDG-------TFQEVKRVFSLKG-HQSAVLAAAFSNSSTRAVTVSKDGKWRIWDT 307 (420)
T ss_pred eCCCCcEEEEecCCCCceEEEEEeccCc-------chhhhhhhheecc-chhheeeeeeCCCcceeEEEecCCcEEEeec
Confidence 5899999999999999999995211100 0112234567888 9999999999999999999999999999998
Q ss_pred cCCCCCC-ceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDS-DMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+..-... +....+.-...+....+....+..+|+ ++.|+.+. ...++++..++++
T Consensus 308 dVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~-g~~lA~s~-gs~l~~~~se~g~ 363 (420)
T KOG2096|consen 308 DVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPS-GDSLAVSF-GSDLKVFASEDGK 363 (420)
T ss_pred cceEecCCCchHhhcCCcchhhcCCCceEEEeCCC-CcEEEeec-CCceEEEEcccCc
Confidence 8532111 111111000112233344458999998 88876554 4568888776654
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.3e-11 Score=80.44 Aligned_cols=111 Identities=18% Similarity=0.290 Sum_probs=90.0
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
||...+.||.+-.||.|-+|++ ...|-+...+.++....|-+++|+ ++..|++.+.+|.|.-||+
T Consensus 33 ~s~kS~~lAvsRt~g~IEiwN~--------------~~~w~~~~vi~g~~drsIE~L~W~-e~~RLFS~g~sg~i~EwDl 97 (691)
T KOG2048|consen 33 YSHKSNQLAVSRTDGNIEIWNL--------------SNNWFLEPVIHGPEDRSIESLAWA-EGGRLFSSGLSGSITEWDL 97 (691)
T ss_pred EeccCCceeeeccCCcEEEEcc--------------CCCceeeEEEecCCCCceeeEEEc-cCCeEEeecCCceEEEEec
Confidence 4566778999999999999997 345566667777556789999999 4667777788999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
-... .........+.|++++.+|. ...++.||.||.+.+++...+.
T Consensus 98 ~~lk----------~~~~~d~~gg~IWsiai~p~-~~~l~IgcddGvl~~~s~~p~~ 143 (691)
T KOG2048|consen 98 HTLK----------QKYNIDSNGGAIWSIAINPE-NTILAIGCDDGVLYDFSIGPDK 143 (691)
T ss_pred ccCc----------eeEEecCCCcceeEEEeCCc-cceEEeecCCceEEEEecCCce
Confidence 9876 44445567789999999998 8999999999988887766543
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.4e-11 Score=76.23 Aligned_cols=115 Identities=16% Similarity=0.298 Sum_probs=85.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEE-ecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT-LSGHHGRTIYDISWCHLTD-LIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~ 78 (138)
|+|||.+|.+| ..++|++||+..+.+.-+ ....+.. -.+ -.+-+.+++++|... .++.++.-.++-|+
T Consensus 166 Fs~DGeqlfaG-ykrcirvFdt~RpGr~c~--------vy~t~~~~k~g-q~giisc~a~sP~~~~~~a~gsY~q~~giy 235 (406)
T KOG2919|consen 166 FSPDGEQLFAG-YKRCIRVFDTSRPGRDCP--------VYTTVTKGKFG-QKGIISCFAFSPMDSKTLAVGSYGQRVGIY 235 (406)
T ss_pred ecCCCCeEeec-ccceEEEeeccCCCCCCc--------chhhhhccccc-ccceeeeeeccCCCCcceeeecccceeeeE
Confidence 79999999965 679999999865554221 1111111 111 256678999999876 88888888888888
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-CCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-DGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~v~~wd~~~~ 136 (138)
.-.... +...+.+|.+.|+.++|+++ ++.|++|.. |-.|-.||+|..
T Consensus 236 ~~~~~~----------pl~llggh~gGvThL~~~ed-Gn~lfsGaRk~dkIl~WDiR~~ 283 (406)
T KOG2919|consen 236 NDDGRR----------PLQLLGGHGGGVTHLQWCED-GNKLFSGARKDDKILCWDIRYS 283 (406)
T ss_pred ecCCCC----------ceeeecccCCCeeeEEeccC-cCeecccccCCCeEEEEeehhc
Confidence 766655 45555699999999999999 888888875 888999999864
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.6e-11 Score=78.87 Aligned_cols=108 Identities=9% Similarity=0.153 Sum_probs=83.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
+||++++||..+..|.|.+....+. +.+..+.- .+.|..+.|+.++..+++++.+|.|.+||+
T Consensus 311 VShd~~fia~~G~~G~I~lLhakT~---------------eli~s~Ki--eG~v~~~~fsSdsk~l~~~~~~GeV~v~nl 373 (514)
T KOG2055|consen 311 VSHDSNFIAIAGNNGHIHLLHAKTK---------------ELITSFKI--EGVVSDFTFSSDSKELLASGGTGEVYVWNL 373 (514)
T ss_pred ecCCCCeEEEcccCceEEeehhhhh---------------hhhheeee--ccEEeeEEEecCCcEEEEEcCCceEEEEec
Confidence 4799999999999999999885443 33555543 578999999999998888889999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
+... +..+......-.-+.++.+++ +.+|++|+..|.|.|||.++
T Consensus 374 ~~~~---------~~~rf~D~G~v~gts~~~S~n-g~ylA~GS~~GiVNIYd~~s 418 (514)
T KOG2055|consen 374 RQNS---------CLHRFVDDGSVHGTSLCISLN-GSYLATGSDSGIVNIYDGNS 418 (514)
T ss_pred CCcc---------eEEEEeecCccceeeeeecCC-CceEEeccCcceEEEeccch
Confidence 9875 222222222223456677788 99999999999999999653
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.8e-11 Score=78.75 Aligned_cols=103 Identities=17% Similarity=0.313 Sum_probs=82.1
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
+|+.+.++|++.|+.+++|+- + +++.+.. -..+..|+.|+|.| .++.|...|...+.|.+
T Consensus 377 hps~~q~~T~gqdk~v~lW~~-~----------------k~~wt~~--~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e 436 (626)
T KOG2106|consen 377 HPSKNQLLTCGQDKHVRLWND-H----------------KLEWTKI--IEDPAECADFHPSG-VVAVGTATGRWFVLDTE 436 (626)
T ss_pred CCChhheeeccCcceEEEccC-C----------------ceeEEEE--ecCceeEeeccCcc-eEEEeeccceEEEEecc
Confidence 578889999999999999992 1 1233322 24578899999999 99999999999999988
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
... ....... ..+++.++|+|+ +.+|+.|+.|+.|.+|-+...
T Consensus 437 ~~~----------lv~~~~d-~~~ls~v~ysp~-G~~lAvgs~d~~iyiy~Vs~~ 479 (626)
T KOG2106|consen 437 TQD----------LVTIHTD-NEQLSVVRYSPD-GAFLAVGSHDNHIYIYRVSAN 479 (626)
T ss_pred cce----------eEEEEec-CCceEEEEEcCC-CCEEEEecCCCeEEEEEECCC
Confidence 643 3333323 789999999999 999999999999999977543
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.4e-11 Score=74.16 Aligned_cols=81 Identities=26% Similarity=0.453 Sum_probs=68.2
Q ss_pred EEecCCCccCeEEEEEecCCCeEEEeeCCCc-EEEEeccCCCCCCceeeeeeeeeeec--ccccceeEEEEccCCCCEEE
Q psy14817 44 CTLSGHHGRTIYDISWCHLTDLIATACGDDA-IRIFKENPEAGDSDMVSFDLVHTEHR--AHNQDVNCVAWNPVVPGMLA 120 (138)
Q Consensus 44 ~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~-i~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~ 120 (138)
..+.. |...|.|++.+.+|.++++++..|+ |+|||...+. ....++ .....|.+|+|+|+ ..+|+
T Consensus 175 ~~I~A-H~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~----------~l~E~RRG~d~A~iy~iaFSp~-~s~La 242 (346)
T KOG2111|consen 175 SIINA-HDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGT----------LLQELRRGVDRADIYCIAFSPN-SSWLA 242 (346)
T ss_pred eEEEc-ccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCc----------EeeeeecCCchheEEEEEeCCC-ccEEE
Confidence 34555 8999999999999999999999998 8999999877 322222 23468999999999 99999
Q ss_pred EEeCCCcEEEEEcCCC
Q psy14817 121 SCSDDGDVKLWQIKLE 136 (138)
Q Consensus 121 ~~~~d~~v~~wd~~~~ 136 (138)
.++..|+|.||.++..
T Consensus 243 vsSdKgTlHiF~l~~~ 258 (346)
T KOG2111|consen 243 VSSDKGTLHIFSLRDT 258 (346)
T ss_pred EEcCCCeEEEEEeecC
Confidence 9999999999998764
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.3e-11 Score=69.88 Aligned_cols=72 Identities=17% Similarity=0.420 Sum_probs=54.0
Q ss_pred ccCeEEEEEecCCCeEEE--eeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC---C
Q psy14817 51 GRTIYDISWCHLTDLIAT--ACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD---D 125 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s--~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---d 125 (138)
.++|.+++|+|++..|+. |..+..+.+||++... ... -....++.+.|+|+ +++++.++. .
T Consensus 59 ~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~~~~----------i~~---~~~~~~n~i~wsP~-G~~l~~~g~~n~~ 124 (194)
T PF08662_consen 59 EGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVKGKK----------IFS---FGTQPRNTISWSPD-GRFLVLAGFGNLN 124 (194)
T ss_pred CCceEEEEECcCCCEEEEEEccCCcccEEEcCcccE----------eEe---ecCCCceEEEECCC-CCEEEEEEccCCC
Confidence 457999999999997654 4456789999997321 222 23457788999999 999998875 4
Q ss_pred CcEEEEEcCCC
Q psy14817 126 GDVKLWQIKLE 136 (138)
Q Consensus 126 ~~v~~wd~~~~ 136 (138)
|.|.+||.+..
T Consensus 125 G~l~~wd~~~~ 135 (194)
T PF08662_consen 125 GDLEFWDVRKK 135 (194)
T ss_pred cEEEEEECCCC
Confidence 66999999754
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.1e-11 Score=81.78 Aligned_cols=107 Identities=18% Similarity=0.314 Sum_probs=91.4
Q ss_pred CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCC
Q psy14817 6 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAG 85 (138)
Q Consensus 6 ~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~ 85 (138)
+.++.|+.+|.+.+|+++.. +.+.++++ +...|+++.-+|--..++.|..+|+|.+++++.++
T Consensus 173 NKIvvGs~~G~lql~Nvrt~---------------K~v~~f~~-~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dk- 235 (910)
T KOG1539|consen 173 NKIVVGSSQGRLQLWNVRTG---------------KVVYTFQE-FFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDK- 235 (910)
T ss_pred eeEEEeecCCcEEEEEeccC---------------cEEEEecc-cccceeEeccCCcceEEEEeccCceEEEEEcccCc-
Confidence 57889999999999997655 55899998 78999999999988899999999999999999887
Q ss_pred CCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCCC
Q psy14817 86 DSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 138 (138)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~ 138 (138)
....++...++|+.++|..|...++++++..|.+.+||+...++
T Consensus 236 ---------il~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl 279 (910)
T KOG1539|consen 236 ---------ILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKL 279 (910)
T ss_pred ---------EEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCee
Confidence 55555333589999999998556788888899999999987653
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.36 E-value=5.3e-11 Score=74.71 Aligned_cols=104 Identities=16% Similarity=0.158 Sum_probs=73.7
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeE-EEeeCCCcEEEEeccCC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACGDDAIRIFKENPE 83 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~-~s~~~d~~i~i~~~~~~ 83 (138)
+..+++++.|+.|++||+... +++..+.. + ..+.++.|+|++..+ +++..++.|++||...+
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~---------------~~~~~~~~-~-~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~ 63 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATL---------------EVTRTFPV-G-QRPRGITLSKDGKLLYVCASDSDTIQVIDLATG 63 (300)
T ss_pred CcEEEEecCCCEEEEEECCCC---------------ceEEEEEC-C-CCCCceEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 357899999999999997432 23555554 3 346789999999865 66778899999998865
Q ss_pred CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEE-EEeCCCcEEEEEcCCCC
Q psy14817 84 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA-SCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~d~~v~~wd~~~~~ 137 (138)
. .......+ ..+..+.|+|+ ++.++ +++.|+.+++||+++.+
T Consensus 64 ~----------~~~~~~~~-~~~~~~~~~~~-g~~l~~~~~~~~~l~~~d~~~~~ 106 (300)
T TIGR03866 64 E----------VIGTLPSG-PDPELFALHPN-GKILYIANEDDNLVTVIDIETRK 106 (300)
T ss_pred c----------EEEeccCC-CCccEEEECCC-CCEEEEEcCCCCeEEEEECCCCe
Confidence 4 22212122 23467889998 77665 45568999999997653
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.5e-11 Score=81.59 Aligned_cols=110 Identities=9% Similarity=0.219 Sum_probs=87.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|||+++++|+|..||.|.+|.-..... +..+ ...+.- |...|+++.|+++|.++++|+.++.+.+|.+
T Consensus 213 ~spn~~~~Aa~d~dGrI~vw~d~~~~~--------~~~t---~t~lHW-H~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~ 280 (792)
T KOG1963|consen 213 LSPNERYLAAGDSDGRILVWRDFGSSD--------DSET---CTLLHW-HHDEVNSLSFSSDGAYLLSGGREGVLVLWQL 280 (792)
T ss_pred eccccceEEEeccCCcEEEEecccccc--------cccc---ceEEEe-cccccceeEEecCCceEeecccceEEEEEee
Confidence 689999999999999999998544211 0111 233444 6789999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
..++ ...+..-.++|..+.++|+ +...+....|.+|.+....
T Consensus 281 ~T~~-----------kqfLPRLgs~I~~i~vS~d-s~~~sl~~~DNqI~li~~~ 322 (792)
T KOG1963|consen 281 ETGK-----------KQFLPRLGSPILHIVVSPD-SDLYSLVLEDNQIHLIKAS 322 (792)
T ss_pred cCCC-----------cccccccCCeeEEEEEcCC-CCeEEEEecCceEEEEecc
Confidence 8765 2223345679999999999 9999999999999987653
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.34 E-value=5.1e-11 Score=75.52 Aligned_cols=123 Identities=16% Similarity=0.230 Sum_probs=87.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCcc-CC-------------CCCCceEEeEE-------------ecC-----
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIP-TP-------------DNDSVWKCVCT-------------LSG----- 48 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~-~~-------------~~~~~~~~~~~-------------~~~----- 48 (138)
|||||++|++-+.| ..+||+.......+... .. ...+...+... ...
T Consensus 194 FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l 272 (398)
T KOG0771|consen 194 FSPDGKFLASIGAD-SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFL 272 (398)
T ss_pred eCCCCcEEEEecCC-ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeecccccc
Confidence 79999999999999 99999987662211100 00 00001110000 000
Q ss_pred ------CCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEE
Q psy14817 49 ------HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC 122 (138)
Q Consensus 49 ------~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 122 (138)
.-...|.+++++++|++++.|+.||.|.|++....+ ........|...|+.+.|+|+ .+.+++.
T Consensus 273 ~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq---------~~~~vk~aH~~~VT~ltF~Pd-sr~~~sv 342 (398)
T KOG0771|consen 273 RLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQ---------RLQYVKEAHLGFVTGLTFSPD-SRYLASV 342 (398)
T ss_pred chhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceee---------eeEeehhhheeeeeeEEEcCC-cCccccc
Confidence 013478999999999999999999999999988765 344555689999999999999 9999999
Q ss_pred eCCCcEEEEEcC
Q psy14817 123 SDDGDVKLWQIK 134 (138)
Q Consensus 123 ~~d~~v~~wd~~ 134 (138)
+.|....+..+.
T Consensus 343 Ss~~~~~v~~l~ 354 (398)
T KOG0771|consen 343 SSDNEAAVTKLA 354 (398)
T ss_pred ccCCceeEEEEe
Confidence 888888887654
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.8e-11 Score=84.08 Aligned_cols=114 Identities=16% Similarity=0.235 Sum_probs=84.8
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccC--eEEEEEecCCC-eEEEeeCCCcEEEEec
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRT--IYDISWCHLTD-LIATACGDDAIRIFKE 80 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~v~~~~~~~-~~~s~~~d~~i~i~~~ 80 (138)
.|+.|++|..||+|++||.+...... .+...+. |... |..+.+.+.|- .+++|+.||.|++||+
T Consensus 1220 ~gn~i~AGfaDGsvRvyD~R~a~~ds------------~v~~~R~-h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~Dl 1286 (1387)
T KOG1517|consen 1220 HGNIIAAGFADGSVRVYDRRMAPPDS------------LVCVYRE-HNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDL 1286 (1387)
T ss_pred CCceEEEeecCCceEEeecccCCccc------------cceeecc-cCCcccceeEEeecCCCcceeeeccCCeEEEEec
Confidence 57899999999999999988765532 2444555 6665 99999999886 6999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+... ......... .....+..+++..++. ..++++|+. +.|+||++...+
T Consensus 1287 R~~~---~e~~~~iv~--~~~yGs~lTal~VH~h-apiiAsGs~-q~ikIy~~~G~~ 1336 (1387)
T KOG1517|consen 1287 RMSS---KETFLTIVA--HWEYGSALTALTVHEH-APIIASGSA-QLIKIYSLSGEQ 1336 (1387)
T ss_pred ccCc---ccccceeee--ccccCccceeeeeccC-CCeeeecCc-ceEEEEecChhh
Confidence 9632 111111111 0112235899999998 999999998 999999987654
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=3e-11 Score=83.76 Aligned_cols=108 Identities=19% Similarity=0.306 Sum_probs=87.9
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
+++.-++++|+.-+.|.+|+..... .++ .+.+ |.+.+..+.|+.+|.++++.++|.++++|++.
T Consensus 142 s~~~~~i~~gsv~~~iivW~~~~dn--------------~p~-~l~G-HeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~ 205 (967)
T KOG0974|consen 142 SAEELYIASGSVFGEIIVWKPHEDN--------------KPI-RLKG-HEGSIFSIVTSLDGRYIASVSDDRSIRLWPID 205 (967)
T ss_pred cCcEEEEEeccccccEEEEeccccC--------------Ccc-eecc-cCCceEEEEEccCCcEEEEEecCcceeeeecc
Confidence 4556689999999999999975221 112 5677 89999999999999999999999999999999
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..+ .......+|..+|+.+.+.|+ .+++++.|-+.++|+.+..+
T Consensus 206 s~~---------~~~~~~fgHsaRvw~~~~~~n---~i~t~gedctcrvW~~~~~~ 249 (967)
T KOG0974|consen 206 SRE---------VLGCTGFGHSARVWACCFLPN---RIITVGEDCTCRVWGVNGTQ 249 (967)
T ss_pred ccc---------ccCcccccccceeEEEEeccc---eeEEeccceEEEEEecccce
Confidence 876 122233489999999999875 99999999999999765443
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.5e-11 Score=81.44 Aligned_cols=123 Identities=15% Similarity=0.232 Sum_probs=83.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC-----------CCeEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL-----------TDLIATA 69 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~-----------~~~~~s~ 69 (138)
|.+....+...-.|.++.|||++...+... ...+-. |..-|+.|..-|- ...|.++
T Consensus 332 Fdet~~klscVYndhSlYvWDvrD~~kvgk------------~~s~ly-HS~ciW~Ve~~p~nv~~~~~aclp~~cF~TC 398 (1080)
T KOG1408|consen 332 FDETTDKLSCVYNDHSLYVWDVRDVNKVGK------------CSSMLY-HSACIWDVENLPCNVHSPTAACLPRGCFTTC 398 (1080)
T ss_pred ecCCCceEEEEEcCceEEEEeccccccccc------------eeeeee-ccceeeeeccccccccCcccccCCccceeEe
Confidence 566778888999999999999987655322 222222 5666666654441 1258999
Q ss_pred eCCCcEEEEeccCCCCCC---------------------------ceeeeeeeeeeecccccceeEEEEccCCCCEEEEE
Q psy14817 70 CGDDAIRIFKENPEAGDS---------------------------DMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC 122 (138)
Q Consensus 70 ~~d~~i~i~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 122 (138)
+.|++|++|++....... ....+..........+..+.+++.+|+ +++|++|
T Consensus 399 SsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~-gqhLAsG 477 (1080)
T KOG1408|consen 399 SSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPD-GQHLASG 477 (1080)
T ss_pred cCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCC-cceeccc
Confidence 999999999998733100 000111111122244568999999999 9999999
Q ss_pred eCCCcEEEEEcCCCC
Q psy14817 123 SDDGDVKLWQIKLEN 137 (138)
Q Consensus 123 ~~d~~v~~wd~~~~~ 137 (138)
..-|.++++++..-+
T Consensus 478 Dr~GnlrVy~Lq~l~ 492 (1080)
T KOG1408|consen 478 DRGGNLRVYDLQELE 492 (1080)
T ss_pred CccCceEEEEehhhh
Confidence 999999999987543
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.3e-11 Score=53.55 Aligned_cols=39 Identities=33% Similarity=0.684 Sum_probs=36.4
Q ss_pred eEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 40 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 40 ~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
++++..+.+ |...|.+++|+|++.++++++.|+.|++||
T Consensus 1 g~~~~~~~~-h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRG-HSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEES-SSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcC-CCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 467888998 999999999999999999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.9e-11 Score=80.52 Aligned_cols=78 Identities=24% Similarity=0.419 Sum_probs=62.4
Q ss_pred CccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEE
Q psy14817 50 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 129 (138)
Q Consensus 50 ~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~ 129 (138)
|.+.|..+.++|-+..++..+.|.+++||...... .+...+..+...+++++|+|..+..|+++..||.+.
T Consensus 397 h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~---------~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~ 467 (555)
T KOG1587|consen 397 HIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIA---------SPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLD 467 (555)
T ss_pred cCcceEeeecCCCccceeeeeccceeEeccccCCC---------CcchhhhhccceeeeeEEcCcCceEEEEEcCCCcee
Confidence 78899999999999855555559999999877322 134444566677999999999788999999999999
Q ss_pred EEEcCCC
Q psy14817 130 LWQIKLE 136 (138)
Q Consensus 130 ~wd~~~~ 136 (138)
+||+...
T Consensus 468 iWDLl~~ 474 (555)
T KOG1587|consen 468 IWDLLQD 474 (555)
T ss_pred hhhhhcc
Confidence 9999764
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.5e-11 Score=85.21 Aligned_cols=106 Identities=20% Similarity=0.258 Sum_probs=84.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
++-+|++++++|+|+++|+|++...... ....-+ |...+..+.+.|. .+++++.|-++++|+.
T Consensus 183 ~s~dg~~i~s~SdDRsiRlW~i~s~~~~--------------~~~~fg-HsaRvw~~~~~~n--~i~t~gedctcrvW~~ 245 (967)
T KOG0974|consen 183 TSLDGRYIASVSDDRSIRLWPIDSREVL--------------GCTGFG-HSARVWACCFLPN--RIITVGEDCTCRVWGV 245 (967)
T ss_pred EccCCcEEEEEecCcceeeeeccccccc--------------Cccccc-ccceeEEEEeccc--eeEEeccceEEEEEec
Confidence 3568999999999999999998654331 123345 8999999999988 9999999999999966
Q ss_pred cCCCCCCceeeeeeeeeeeccc-ccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAH-NQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
.... .....+| ...++.+...+. ..++++++.|+.+++||+.+
T Consensus 246 ~~~~-----------l~~y~~h~g~~iw~~~~~~~-~~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 246 NGTQ-----------LEVYDEHSGKGIWKIAVPIG-VIIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred ccce-----------ehhhhhhhhcceeEEEEcCC-ceEEEeeccCcchhhhhhhc
Confidence 6433 1133344 357899999988 88999999999999999865
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.2e-10 Score=74.67 Aligned_cols=105 Identities=12% Similarity=0.245 Sum_probs=84.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|.| .+|.|...|...+.|.++.. +.++.. ...++++++|+|+|.+|+.|+.|+.|.+|.+
T Consensus 415 fhpsg-~va~Gt~~G~w~V~d~e~~~----------------lv~~~~-d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~V 476 (626)
T KOG2106|consen 415 FHPSG-VVAVGTATGRWFVLDTETQD----------------LVTIHT-DNEQLSVVRYSPDGAFLAVGSHDNHIYIYRV 476 (626)
T ss_pred ccCcc-eEEEeeccceEEEEecccce----------------eEEEEe-cCCceEEEEEcCCCCEEEEecCCCeEEEEEE
Confidence 67888 99999999999999975421 233333 3679999999999999999999999999998
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEE
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd 132 (138)
.... .. ....-+.+..+|+.+.|+++ ++++.+-+.|..|-.|.
T Consensus 477 s~~g---~~-----y~r~~k~~gs~ithLDwS~D-s~~~~~~S~d~eiLyW~ 519 (626)
T KOG2106|consen 477 SANG---RK-----YSRVGKCSGSPITHLDWSSD-SQFLVSNSGDYEILYWK 519 (626)
T ss_pred CCCC---cE-----EEEeeeecCceeEEeeecCC-CceEEeccCceEEEEEc
Confidence 8654 11 11222234489999999999 99999999999999994
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.5e-10 Score=73.25 Aligned_cols=108 Identities=28% Similarity=0.503 Sum_probs=83.9
Q ss_pred CccCCCeEEEeeC-CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~-d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~ 78 (138)
|+|+++.+++++. |+.+++|+.... ..+..+.. |...+.++.|+|++. .+++++.|+.+++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~~w 226 (466)
T COG2319 163 FSPDGKLLASGSSLDGTIKLWDLRTG---------------KPLSTLAG-HTDPVSSLAFSPDGGLLIASGSSDGTIRLW 226 (466)
T ss_pred ECCCCCEEEecCCCCCceEEEEcCCC---------------ceEEeecc-CCCceEEEEEcCCcceEEEEecCCCcEEEE
Confidence 5788888888886 999999997542 34666776 889999999999998 66666899999999
Q ss_pred eccCCCCCCceeeeeeeee-eecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHT-EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+...+. ... ....|.... ...|+|+ +..+++++.|+.+++|+++..
T Consensus 227 d~~~~~----------~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~d~~~~~~~~~~~ 273 (466)
T COG2319 227 DLSTGK----------LLRSTLSGHSDSV-VSSFSPD-GSLLASGSSDGTIRLWDLRSS 273 (466)
T ss_pred ECCCCc----------EEeeecCCCCcce-eEeECCC-CCEEEEecCCCcEEEeeecCC
Confidence 777443 222 344566554 3389998 788889999999999998754
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.7e-11 Score=79.71 Aligned_cols=82 Identities=20% Similarity=0.371 Sum_probs=70.9
Q ss_pred EEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCC-CCEEEEE
Q psy14817 44 CTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV-PGMLASC 122 (138)
Q Consensus 44 ~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~ 122 (138)
..+.+ |.+-|+++.|+.+|.+|++|++|-.+.|||....+ ....+..+|...|.+++|-|.. ..++++|
T Consensus 44 ~eL~G-H~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~K---------llhsI~TgHtaNIFsvKFvP~tnnriv~sg 113 (758)
T KOG1310|consen 44 AELTG-HTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYK---------LLHSISTGHTANIFSVKFVPYTNNRIVLSG 113 (758)
T ss_pred hhhcc-ccceecceeecCCCCEEeecCCcceEEeecchhcc---------eeeeeecccccceeEEeeeccCCCeEEEec
Confidence 46778 99999999999999999999999999999998654 3455567899999999999863 4588999
Q ss_pred eCCCcEEEEEcCC
Q psy14817 123 SDDGDVKLWQIKL 135 (138)
Q Consensus 123 ~~d~~v~~wd~~~ 135 (138)
..|..|+++|+..
T Consensus 114 AgDk~i~lfdl~~ 126 (758)
T KOG1310|consen 114 AGDKLIKLFDLDS 126 (758)
T ss_pred cCcceEEEEeccc
Confidence 9999999999874
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.8e-10 Score=69.11 Aligned_cols=113 Identities=14% Similarity=0.197 Sum_probs=85.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~ 79 (138)
|++.+..++++-.+|.+.+-+... ...+.++..+. |....+...|+...+ ++.+|++|+.+..||
T Consensus 129 ~~~~~~~i~vs~s~G~~~~v~~t~-------------~~le~vq~wk~-He~E~Wta~f~~~~pnlvytGgDD~~l~~~D 194 (339)
T KOG0280|consen 129 ISTSGTKIFVSDSRGSISGVYETE-------------MVLEKVQTWKV-HEFEAWTAKFSDKEPNLVYTGGDDGSLSCWD 194 (339)
T ss_pred eeccCceEEEEcCCCcEEEEecce-------------eeeeecccccc-cceeeeeeecccCCCceEEecCCCceEEEEE
Confidence 355666777787888888555322 22244556777 888888888887665 899999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
++... .++.+..+.|...|.++.-+|..+.++++|+.|..|++||.|+
T Consensus 195 ~R~p~--------~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRn 242 (339)
T KOG0280|consen 195 IRIPK--------TFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRN 242 (339)
T ss_pred ecCCc--------ceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhc
Confidence 99322 1233334568889999988877688999999999999999984
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.3e-11 Score=81.87 Aligned_cols=116 Identities=16% Similarity=0.319 Sum_probs=81.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|-|||..++.+. +..+.+||.... ..+.++++ |+..|.+++|+.+|+.+++|+.|..|.+|..
T Consensus 20 fkPDGsqL~lAA-g~rlliyD~ndG---------------~llqtLKg-HKDtVycVAys~dGkrFASG~aDK~VI~W~~ 82 (1081)
T KOG1538|consen 20 FKPDGTQLILAA-GSRLLVYDTSDG---------------TLLQPLKG-HKDTVYCVAYAKDGKRFASGSADKSVIIWTS 82 (1081)
T ss_pred ECCCCceEEEec-CCEEEEEeCCCc---------------cccccccc-ccceEEEEEEccCCceeccCCCceeEEEecc
Confidence 568998777664 467889996444 34788888 9999999999999999999999999999987
Q ss_pred cCCC-------CCCceeeeeeee--------------------eeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 81 NPEA-------GDSDMVSFDLVH--------------------TEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 81 ~~~~-------~~~~~~~~~~~~--------------------~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
.... ...+-+.+..+. .........+.+.+|..+ +++++.|-.||+|.+-+.
T Consensus 83 klEG~LkYSH~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnD-GqylalG~~nGTIsiRNk 161 (1081)
T KOG1538|consen 83 KLEGILKYSHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTND-GQYLALGMFNGTISIRNK 161 (1081)
T ss_pred cccceeeeccCCeeeEeecCchHHHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCC-CcEEEEeccCceEEeecC
Confidence 6432 000001110000 000112346777888888 899999988998887654
Q ss_pred C
Q psy14817 134 K 134 (138)
Q Consensus 134 ~ 134 (138)
.
T Consensus 162 ~ 162 (1081)
T KOG1538|consen 162 N 162 (1081)
T ss_pred C
Confidence 3
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.1e-11 Score=73.59 Aligned_cols=62 Identities=21% Similarity=0.288 Sum_probs=55.9
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
||++.+||++.|+.||||+.++.. ++..+.. |...|++++|+|+.+.+++++.|..|.+|++
T Consensus 261 pD~KIlATAGWD~RiRVyswrtl~---------------pLAVLky-Hsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 261 PDGKILATAGWDHRIRVYSWRTLN---------------PLAVLKY-HSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred cCCcEEeecccCCcEEEEEeccCC---------------chhhhhh-hhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 789999999999999999976653 4667776 8999999999999999999999999999986
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=99.22 E-value=7.8e-11 Score=86.22 Aligned_cols=121 Identities=17% Similarity=0.276 Sum_probs=88.8
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
+|...+.+||+.||+|++|.-...+. +..++......|+.+.|+.+|..+..+..||.+.+|...
T Consensus 2217 Hp~~~~Yltgs~dgsv~~~~w~~~~~---------------v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~ 2281 (2439)
T KOG1064|consen 2217 HPSDPYYLTGSQDGSVRMFEWGHGQQ---------------VVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS 2281 (2439)
T ss_pred CCCCceEEecCCCceEEEEeccCCCe---------------EEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC
Confidence 46678899999999999999755443 333333235788889999999999999999999999877
Q ss_pred CCCC----------------------------CCcee-----eeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcE
Q psy14817 82 PEAG----------------------------DSDMV-----SFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 128 (138)
Q Consensus 82 ~~~~----------------------------~~~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v 128 (138)
.... ..+.. ...........|...++++++-|. .+.|++|+.+|.|
T Consensus 2282 pk~~~s~qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~-~qllisggr~G~v 2360 (2439)
T KOG1064|consen 2282 PKPYTSWQCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPK-HQLLISGGRKGEV 2360 (2439)
T ss_pred CcceeccccCCccccceeeeehhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCc-ceEEEecCCcCcE
Confidence 4320 00000 000011122578899999999999 9999999999999
Q ss_pred EEEEcCCCCC
Q psy14817 129 KLWQIKLENL 138 (138)
Q Consensus 129 ~~wd~~~~~~ 138 (138)
++||+++.+|
T Consensus 2361 ~l~D~rqrql 2370 (2439)
T KOG1064|consen 2361 CLFDIRQRQL 2370 (2439)
T ss_pred EEeehHHHHH
Confidence 9999987653
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.4e-09 Score=70.42 Aligned_cols=108 Identities=27% Similarity=0.496 Sum_probs=82.4
Q ss_pred cCCC-eEEEeeC-CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC-CCcEEEEe
Q psy14817 3 QTGS-RLATCSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-DDAIRIFK 79 (138)
Q Consensus 3 ~~~~-~l~t~s~-d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~-d~~i~i~~ 79 (138)
+++. .++..+. |+.+++|+... .......+.. |...|..+.|+|++..+++++. |+.+++|+
T Consensus 120 ~~~~~~~~~~~~~d~~~~~~~~~~--------------~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (466)
T COG2319 120 PDGNSILLASSSLDGTVKLWDLST--------------PGKLIRTLEG-HSESVTSLAFSPDGKLLASGSSLDGTIKLWD 184 (466)
T ss_pred CCcceEEeccCCCCccEEEEEecC--------------CCeEEEEEec-CcccEEEEEECCCCCEEEecCCCCCceEEEE
Confidence 4555 4555455 99999999754 1233566666 8889999999999998888875 99999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCC-EEEEEeCCCcEEEEEcCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~d~~v~~wd~~~~ 136 (138)
+.... .......|...+.+++|+|+ +. .+++++.|+.+++||.+.+
T Consensus 185 ~~~~~----------~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~d~~i~~wd~~~~ 231 (466)
T COG2319 185 LRTGK----------PLSTLAGHTDPVSSLAFSPD-GGLLIASGSSDGTIRLWDLSTG 231 (466)
T ss_pred cCCCc----------eEEeeccCCCceEEEEEcCC-cceEEEEecCCCcEEEEECCCC
Confidence 98744 33344468899999999988 76 5666699999999987643
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.5e-10 Score=71.03 Aligned_cols=112 Identities=12% Similarity=0.257 Sum_probs=84.6
Q ss_pred CCCeEEEeeC----CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEE
Q psy14817 4 TGSRLATCSD----DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIF 78 (138)
Q Consensus 4 ~~~~l~t~s~----d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~ 78 (138)
+++.+++|.+ |..|.+||.|.... ++..+...|...|++++|+|..+ ++++|+-||.+.+|
T Consensus 128 k~~ii~~GtE~~~s~A~v~lwDvR~~qq--------------~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlf 193 (376)
T KOG1188|consen 128 KKNIIACGTELTRSDASVVLWDVRSEQQ--------------LLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLF 193 (376)
T ss_pred cCCeEEeccccccCceEEEEEEeccccc--------------hhhhhhhhccCcceeEEecCCCCCeEEeecccceEEee
Confidence 4567777753 78899999876543 24445555999999999999887 99999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|+....+. ...... ..+...|..+.|.......+..-++.++..+|+++.+
T Consensus 194 D~~~d~Ee------DaL~~v-iN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~ 244 (376)
T KOG1188|consen 194 DTKKDNEE------DALLHV-INHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDG 244 (376)
T ss_pred ecCCCcch------hhHHHh-hcccceeeeeeeecCCcceEEEEEccCceeEEEccCC
Confidence 99865311 111222 2466789999998874457888899999999998765
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.7e-10 Score=79.33 Aligned_cols=111 Identities=21% Similarity=0.317 Sum_probs=76.6
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec-CCCeEEEeeCCCcEEEEeccC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATACGDDAIRIFKENP 82 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~s~~~d~~i~i~~~~~ 82 (138)
+..+|.++++-..|||||...... +..+......-++++.-+. .|..+++|..||.|++||.+.
T Consensus 1176 ~~G~Ll~tGd~r~IRIWDa~~E~~---------------~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~ 1240 (1387)
T KOG1517|consen 1176 QSGHLLVTGDVRSIRIWDAHKEQV---------------VADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRM 1240 (1387)
T ss_pred hCCeEEecCCeeEEEEEeccccee---------------EeecccCCCccceeecccccCCceEEEeecCCceEEeeccc
Confidence 334555555689999999755433 3333332234455554333 357999999999999999986
Q ss_pred CCCCCceeeeeeeeeeecccccc--eeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 83 EAGDSDMVSFDLVHTEHRAHNQD--VNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.... ......+.|... |..+.+.+..-..|++|+.||.|.+||+|+.
T Consensus 1241 a~~d-------s~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~ 1289 (1387)
T KOG1517|consen 1241 APPD-------SLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMS 1289 (1387)
T ss_pred CCcc-------ccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccC
Confidence 5411 223344567766 9999998873346999999999999999983
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.1e-10 Score=74.50 Aligned_cols=116 Identities=11% Similarity=0.223 Sum_probs=80.6
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCC-----ccCeEEEEEecCCCeEEEeeCCCcEE
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-----GRTIYDISWCHLTDLIATACGDDAIR 76 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~v~~~~~~~~~~s~~~d~~i~ 76 (138)
++...+|++|+.||.|-.||.+....... ......+.. | ...|+++.|..+|-.++.|..+|.+.
T Consensus 184 n~~hgLla~Gt~~g~VEfwDpR~ksrv~~---------l~~~~~v~s-~pg~~~~~svTal~F~d~gL~~aVGts~G~v~ 253 (703)
T KOG2321|consen 184 NEEHGLLACGTEDGVVEFWDPRDKSRVGT---------LDAASSVNS-HPGGDAAPSVTALKFRDDGLHVAVGTSTGSVL 253 (703)
T ss_pred cCccceEEecccCceEEEecchhhhhhee---------eecccccCC-CccccccCcceEEEecCCceeEEeeccCCcEE
Confidence 45567899999999999999876544211 111111111 2 23599999999999999999999999
Q ss_pred EEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCC-CEEEEEeCCCcEEEEEcCCCC
Q psy14817 77 IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP-GMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|||++... ...........+|..+.|.+... ..+++. ....++|||-.+++
T Consensus 254 iyDLRa~~---------pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk 305 (703)
T KOG2321|consen 254 IYDLRASK---------PLLVKDHGYELPIKKLDWQDTDQQNKVVSM-DKRILKIWDECTGK 305 (703)
T ss_pred EEEcccCC---------ceeecccCCccceeeecccccCCCceEEec-chHHhhhcccccCC
Confidence 99999876 22222234556899999987623 344444 35679999987764
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.9e-10 Score=76.43 Aligned_cols=110 Identities=18% Similarity=0.297 Sum_probs=78.8
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEec
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKE 80 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~ 80 (138)
+|=+..++..+.|.+|+||.... ...++..+.. +...+++++|+|..+ .|+++..||.|.+||+
T Consensus 407 nPF~~k~fls~gDW~vriWs~~~--------------~~~Pl~~~~~-~~~~v~~vaWSptrpavF~~~d~~G~l~iWDL 471 (555)
T KOG1587|consen 407 NPFYPKNFLSVGDWTVRIWSEDV--------------IASPLLSLDS-SPDYVTDVAWSPTRPAVFATVDGDGNLDIWDL 471 (555)
T ss_pred CCCccceeeeeccceeEeccccC--------------CCCcchhhhh-ccceeeeeEEcCcCceEEEEEcCCCceehhhh
Confidence 45454444444499999999532 2233555555 566799999999887 8888999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
.... ..+.... ..+....+.+.|++. +..++.|...|.+.++++..
T Consensus 472 l~~~---~~Pv~s~-----~~~~~~l~~~~~s~~-g~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 472 LQDD---EEPVLSQ-----KVCSPALTRVRWSPN-GKLLAVGDANGTTHILKLSE 517 (555)
T ss_pred hccc---cCCcccc-----cccccccceeecCCC-CcEEEEecCCCcEEEEEcCc
Confidence 9765 1111111 122456667788888 99999999999999999853
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.4e-09 Score=70.97 Aligned_cols=105 Identities=14% Similarity=0.174 Sum_probs=69.1
Q ss_pred CccCCCeEEEeeCC---CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEe-eCCCcEE
Q psy14817 1 MIQTGSRLATCSDD---ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA-CGDDAIR 76 (138)
Q Consensus 1 ~s~~~~~l~t~s~d---~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~-~~d~~i~ 76 (138)
|||+|+.|+.++.+ ..|.+||+..... +.+..+.+ ....++|+|+|..++.+ ..++.+.
T Consensus 211 wSPDG~~la~~s~~~~~~~i~i~dl~tg~~-------------~~l~~~~g----~~~~~~wSPDG~~La~~~~~~g~~~ 273 (429)
T PRK01742 211 WSPDGSKLAYVSFENKKSQLVVHDLRSGAR-------------KVVASFRG----HNGAPAFSPDGSRLAFASSKDGVLN 273 (429)
T ss_pred EcCCCCEEEEEEecCCCcEEEEEeCCCCce-------------EEEecCCC----ccCceeECCCCCEEEEEEecCCcEE
Confidence 68999999988754 3699999754321 22333333 23468999999977665 4677766
Q ss_pred EEecc--CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEE-eCCCcEEEEEcC
Q psy14817 77 IFKEN--PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC-SDDGDVKLWQIK 134 (138)
Q Consensus 77 i~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~d~~v~~wd~~ 134 (138)
||.++ .+. .... ..+...+....|+|+ +..++.+ ..++...+|+++
T Consensus 274 Iy~~d~~~~~----------~~~l-t~~~~~~~~~~wSpD-G~~i~f~s~~~g~~~I~~~~ 322 (429)
T PRK01742 274 IYVMGANGGT----------PSQL-TSGAGNNTEPSWSPD-GQSILFTSDRSGSPQVYRMS 322 (429)
T ss_pred EEEEECCCCC----------eEee-ccCCCCcCCEEECCC-CCEEEEEECCCCCceEEEEE
Confidence 66443 332 2222 245556788999999 8766544 467888888764
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=99.13 E-value=8.3e-10 Score=75.17 Aligned_cols=126 Identities=14% Similarity=0.125 Sum_probs=94.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+.+..++|.|+.||.+++-.+................+...-+++.+ |.+.|.-+.|+...+.+-++..+|.|.+|-+
T Consensus 22 WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeG-H~~sV~vvTWNe~~QKLTtSDt~GlIiVWml 100 (1189)
T KOG2041|consen 22 WNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEG-HNASVMVVTWNENNQKLTTSDTSGLIIVWML 100 (1189)
T ss_pred EcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhcc-CcceEEEEEeccccccccccCCCceEEEEee
Confidence 456778999999999999998865433222222223344455678888 9999999999999999999999999999988
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
..++ ...........+.|.+++|+.+ +..++.+-.||.|.+=.+...
T Consensus 101 ykgs--------W~EEMiNnRnKSvV~SmsWn~d-G~kIcIvYeDGavIVGsvdGN 147 (1189)
T KOG2041|consen 101 YKGS--------WCEEMINNRNKSVVVSMSWNLD-GTKICIVYEDGAVIVGSVDGN 147 (1189)
T ss_pred eccc--------HHHHHhhCcCccEEEEEEEcCC-CcEEEEEEccCCEEEEeeccc
Confidence 8765 1111122345578899999999 999999999999887666544
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=99.12 E-value=5.7e-10 Score=49.01 Aligned_cols=36 Identities=36% Similarity=0.800 Sum_probs=32.7
Q ss_pred eeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEE
Q psy14817 96 HTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 96 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd 132 (138)
...+.+|...|++++|+|+ +.+|++++.|+.|++||
T Consensus 4 ~~~~~~h~~~i~~i~~~~~-~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 4 VRTFRGHSSSINSIAWSPD-GNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEESSSSSEEEEEEETT-SSEEEEEETTSEEEEEE
T ss_pred EEEEcCCCCcEEEEEEecc-cccceeeCCCCEEEEEC
Confidence 3445689999999999999 99999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.11 E-value=5e-09 Score=66.10 Aligned_cols=115 Identities=18% Similarity=0.229 Sum_probs=75.3
Q ss_pred CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC-CCcEEEEeccCCC
Q psy14817 6 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-DDAIRIFKENPEA 84 (138)
Q Consensus 6 ~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~-d~~i~i~~~~~~~ 84 (138)
.-|+.|+. +-|++|.............. ...-...+....+ ...|++++|++||..+++++. |..|.|||...+.
T Consensus 154 selavgCr-~gIciW~~s~tln~~r~~~~-~s~~~~qvl~~pg--h~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~ 229 (445)
T KOG2139|consen 154 SELAVGCR-AGICIWSDSRTLNANRNIRM-MSTHHLQVLQDPG--HNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQ 229 (445)
T ss_pred ceeeeeec-ceeEEEEcCccccccccccc-ccccchhheeCCC--CceeeEEEEcCCCCEEeecccCcceEEEEcCCCCC
Confidence 45666665 67889986433221110000 0000011222233 368999999999998888875 5579999999876
Q ss_pred CCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 85 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
...+....-+.++-+.|+|+ +.+|+.+..|+..++|+..+
T Consensus 230 ----------~~pL~~~glgg~slLkwSPd-gd~lfaAt~davfrlw~e~q 269 (445)
T KOG2139|consen 230 ----------KIPLIPKGLGGFSLLKWSPD-GDVLFAATCDAVFRLWQENQ 269 (445)
T ss_pred ----------cccccccCCCceeeEEEcCC-CCEEEEecccceeeeehhcc
Confidence 22222234467889999999 99999999999999996543
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.10 E-value=2e-09 Score=71.05 Aligned_cols=76 Identities=14% Similarity=0.165 Sum_probs=65.8
Q ss_pred CccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEE
Q psy14817 50 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 129 (138)
Q Consensus 50 ~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~ 129 (138)
|.+.|.++.++.+-..|.+++.|..+..|+..... ..+..+.....+..++.+|+ +.++++++ ++|+
T Consensus 101 h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~----------~~~~~~~~~~~~~sl~is~D-~~~l~~as--~~ik 167 (541)
T KOG4547|consen 101 HYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKV----------IIRIWKEQKPLVSSLCISPD-GKILLTAS--RQIK 167 (541)
T ss_pred CCCcceeeecccccCceEecCCceeEEEEecccce----------eeeeeccCCCccceEEEcCC-CCEEEecc--ceEE
Confidence 78899999998888899999999999999988766 56666677788999999999 99999886 5799
Q ss_pred EEEcCCCCC
Q psy14817 130 LWQIKLENL 138 (138)
Q Consensus 130 ~wd~~~~~~ 138 (138)
+||++++++
T Consensus 168 ~~~~~~kev 176 (541)
T KOG4547|consen 168 VLDIETKEV 176 (541)
T ss_pred EEEccCceE
Confidence 999998763
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.2e-09 Score=68.46 Aligned_cols=118 Identities=9% Similarity=0.119 Sum_probs=82.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec-CCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~s~~~d~~i~i~~ 79 (138)
|...++++..|+..|.|...|++.... ....+...+. |...|+++..-. +++++.+.+.+|+|++||
T Consensus 260 f~~s~nLv~~GcRngeI~~iDLR~rnq----------G~~~~a~rly--h~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD 327 (425)
T KOG2695|consen 260 FAGSDNLVFNGCRNGEIFVIDLRCRNQ----------GNGWCAQRLY--HDSSVTSLQILQFSQQKLMASDMTGKIKLYD 327 (425)
T ss_pred hcccCCeeEecccCCcEEEEEeeeccc----------CCCcceEEEE--cCcchhhhhhhccccceEeeccCcCceeEee
Confidence 345678999999999999999976533 1113344443 788999998776 677899999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEE--EEccCCCCEEEEEeCCCcEEEEEcCCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCV--AWNPVVPGMLASCSDDGDVKLWQIKLENL 138 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~l~~~~~d~~v~~wd~~~~~~ 138 (138)
.+..+... -.....+|.+.-.-+ ...+. ...+++++.|.-.|||.++.+.|
T Consensus 328 ~R~~K~~~-------~V~qYeGHvN~~a~l~~~v~~e-eg~I~s~GdDcytRiWsl~~ghL 380 (425)
T KOG2695|consen 328 LRATKCKK-------SVMQYEGHVNLSAYLPAHVKEE-EGSIFSVGDDCYTRIWSLDSGHL 380 (425)
T ss_pred ehhhhccc-------ceeeeecccccccccccccccc-cceEEEccCeeEEEEEecccCce
Confidence 99654000 123333554332222 23455 67888899999999999997754
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.2e-09 Score=69.50 Aligned_cols=86 Identities=10% Similarity=0.140 Sum_probs=63.1
Q ss_pred ccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeee-eeeecccccceeEEEEccCCCCEEEEEeCCCcEE
Q psy14817 51 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLV-HTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 129 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~ 129 (138)
.+.+++|..++-..+|++|+.+|.|..||.+..+..........+ ..........|+++.|+.+ +-.++.|..+|.+.
T Consensus 175 ~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~-gL~~aVGts~G~v~ 253 (703)
T KOG2321|consen 175 SGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDD-GLHVAVGTSTGSVL 253 (703)
T ss_pred cccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCC-ceeEEeeccCCcEE
Confidence 467899999999999999999999999999976511111111100 0011112235999999988 99999999999999
Q ss_pred EEEcCCCC
Q psy14817 130 LWQIKLEN 137 (138)
Q Consensus 130 ~wd~~~~~ 137 (138)
|+|+|+.+
T Consensus 254 iyDLRa~~ 261 (703)
T KOG2321|consen 254 IYDLRASK 261 (703)
T ss_pred EEEcccCC
Confidence 99999764
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.1e-08 Score=64.31 Aligned_cols=122 Identities=7% Similarity=0.115 Sum_probs=72.2
Q ss_pred CccCCCeEE-EeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC-CCcEEEE
Q psy14817 1 MIQTGSRLA-TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-DDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~-t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~-d~~i~i~ 78 (138)
|+|++++++ +...++.|.+||+......... . ........ ......+.|+|++++++++.. ++.|.+|
T Consensus 133 ~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~-------~-~~~~~~~~--g~~p~~~~~~pdg~~lyv~~~~~~~v~v~ 202 (330)
T PRK11028 133 IDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQ-------E-PAEVTTVE--GAGPRHMVFHPNQQYAYCVNELNSSVDVW 202 (330)
T ss_pred eCCCCCEEEEeeCCCCEEEEEEECCCCccccc-------C-CCceecCC--CCCCceEEECCCCCEEEEEecCCCEEEEE
Confidence 578898775 5556799999998642211000 0 00011111 234567999999998877765 8899999
Q ss_pred eccCCCCCCceeeeeeeeeeec--ccccceeEEEEccCCCCEEEEEeC-CCcEEEEEcCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHR--AHNQDVNCVAWNPVVPGMLASCSD-DGDVKLWQIKL 135 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~-d~~v~~wd~~~ 135 (138)
++....... ..... ...... .+......+.++|+ +++++++.. ++.|.+|++..
T Consensus 203 ~~~~~~~~~-~~~~~-~~~~p~~~~~~~~~~~i~~~pd-g~~lyv~~~~~~~I~v~~i~~ 259 (330)
T PRK11028 203 QLKDPHGEI-ECVQT-LDMMPADFSDTRWAADIHITPD-GRHLYACDRTASLISVFSVSE 259 (330)
T ss_pred EEeCCCCCE-EEEEE-EecCCCcCCCCccceeEEECCC-CCEEEEecCCCCeEEEEEEeC
Confidence 998432110 11110 100000 11123346889999 888887754 78999999854
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.3e-09 Score=66.80 Aligned_cols=105 Identities=16% Similarity=0.151 Sum_probs=71.3
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEE-ecCCCccCeEEEEEecCC-CeEEEeeCCCcEEEEecc
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT-LSGHHGRTIYDISWCHLT-DLIATACGDDAIRIFKEN 81 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~v~~~~~~-~~~~s~~~d~~i~i~~~~ 81 (138)
+.+++.+|++|+.+.-||++.+. +.+.. .+. |...|.+|.-+|.. .++++|+.|..|++||.+
T Consensus 177 ~pnlvytGgDD~~l~~~D~R~p~--------------~~i~~n~kv-H~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtR 241 (339)
T KOG0280|consen 177 EPNLVYTGGDDGSLSCWDIRIPK--------------TFIWHNSKV-HTSGVVSIYSSPPKPTYIATGSYDECIRVLDTR 241 (339)
T ss_pred CCceEEecCCCceEEEEEecCCc--------------ceeeeccee-eecceEEEecCCCCCceEEEeccccceeeeehh
Confidence 45789999999999999997433 22333 333 77788888877654 499999999999999999
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
.... +.. ...-.+.|+.+.++|.....++.++...-.+|-+.
T Consensus 242 nm~k---------Pl~-~~~v~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~ 283 (339)
T KOG0280|consen 242 NMGK---------PLF-KAKVGGGVWRIKHHPEIFHRLLAACMHNGAKILDS 283 (339)
T ss_pred cccC---------ccc-cCccccceEEEEecchhhhHHHHHHHhcCceEEEe
Confidence 6441 111 11334789999999874444444444444555444
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.4e-08 Score=64.09 Aligned_cols=117 Identities=15% Similarity=0.115 Sum_probs=74.0
Q ss_pred CccCCCeEEEeeC-CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEE-EeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA-TACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~-d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~-s~~~d~~i~i~ 78 (138)
|+|+++++++++. ++.|.+|++....... +.+..+.+ .....++.++|++++++ +...++.|.+|
T Consensus 87 ~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~-----------~~~~~~~~--~~~~~~~~~~p~g~~l~v~~~~~~~v~v~ 153 (330)
T PRK11028 87 TDHQGRFLFSASYNANCVSVSPLDKDGIPV-----------APIQIIEG--LEGCHSANIDPDNRTLWVPCLKEDRIRLF 153 (330)
T ss_pred ECCCCCEEEEEEcCCCeEEEEEECCCCCCC-----------CceeeccC--CCcccEeEeCCCCCEEEEeeCCCCEEEEE
Confidence 5789998887764 8899999985322110 11222222 23467788999998665 44566899999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-CCcEEEEEcCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-DGDVKLWQIKL 135 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~v~~wd~~~ 135 (138)
|+.... ....... ..... ........+.|+|+ ++++++++. ++.|.+|++..
T Consensus 154 d~~~~g-~l~~~~~-~~~~~--~~g~~p~~~~~~pd-g~~lyv~~~~~~~v~v~~~~~ 206 (330)
T PRK11028 154 TLSDDG-HLVAQEP-AEVTT--VEGAGPRHMVFHPN-QQYAYCVNELNSSVDVWQLKD 206 (330)
T ss_pred EECCCC-cccccCC-Cceec--CCCCCCceEEECCC-CCEEEEEecCCCEEEEEEEeC
Confidence 997532 0000000 00011 11234678999999 888877776 99999999873
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.5e-08 Score=63.90 Aligned_cols=106 Identities=16% Similarity=0.273 Sum_probs=75.0
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC--CccCeEEEEEecCCCeEEE-ee-CCCcEEEEec
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH--HGRTIYDISWCHLTDLIAT-AC-GDDAIRIFKE 80 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~v~~~~~~~~~~s-~~-~d~~i~i~~~ 80 (138)
.+.|+.+-+ ..|.|||+..+ +.+.++... +...+.++..++.+.+++- ++ ..|.|.+||.
T Consensus 97 r~RLvV~Le-e~IyIydI~~M---------------klLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~ 160 (391)
T KOG2110|consen 97 RKRLVVCLE-ESIYIYDIKDM---------------KLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDT 160 (391)
T ss_pred cceEEEEEc-ccEEEEecccc---------------eeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEc
Confidence 345665655 45999997665 335555442 3344556666655555543 33 4578999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCc-EEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGD-VKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~-v~~wd~~~~~ 137 (138)
.... ......+|.+.+-+++|+++ |.+|++++..|+ |||+.+..++
T Consensus 161 ~nl~----------~v~~I~aH~~~lAalafs~~-G~llATASeKGTVIRVf~v~~G~ 207 (391)
T KOG2110|consen 161 INLQ----------PVNTINAHKGPLAALAFSPD-GTLLATASEKGTVIRVFSVPEGQ 207 (391)
T ss_pred ccce----------eeeEEEecCCceeEEEECCC-CCEEEEeccCceEEEEEEcCCcc
Confidence 8765 44445599999999999999 999999999887 7898887664
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.5e-09 Score=70.60 Aligned_cols=91 Identities=11% Similarity=0.125 Sum_probs=70.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|++..+++++|++|-..+|||.+. +.+.+-.. |..+|++++|+|+ ..++.++.+ ++++
T Consensus 194 W~~~s~lI~sgGED~kfKvWD~~G----------------~~Lf~S~~-~ey~ITSva~npd-~~~~v~S~n-t~R~--- 251 (737)
T KOG1524|consen 194 WSTQSNIIASGGEDFRFKIWDAQG----------------ANLFTSAA-EEYAITSVAFNPE-KDYLLWSYN-TARF--- 251 (737)
T ss_pred cCccccceeecCCceeEEeecccC----------------cccccCCh-hccceeeeeeccc-cceeeeeee-eeee---
Confidence 688899999999999999999643 23455455 7889999999999 666655543 3441
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEE
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd 132 (138)
.+...+.|..++|+++ +..++.|+..|.+.+=.
T Consensus 252 ------------------~~p~~GSifnlsWS~D-GTQ~a~gt~~G~v~~A~ 284 (737)
T KOG1524|consen 252 ------------------SSPRVGSIFNLSWSAD-GTQATCGTSTGQLIVAY 284 (737)
T ss_pred ------------------cCCCccceEEEEEcCC-CceeeccccCceEEEee
Confidence 2345678999999999 99999999998877643
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.02 E-value=5.4e-10 Score=74.27 Aligned_cols=105 Identities=22% Similarity=0.210 Sum_probs=84.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|...+|+.++. ..|+|||+-... .++.+.. .-..|..++.+|.|..++.++.|+.+..+|+
T Consensus 574 FHPs~p~lfVaTq-~~vRiYdL~kqe---------------lvKkL~t-g~kwiS~msihp~GDnli~gs~d~k~~WfDl 636 (733)
T KOG0650|consen 574 FHPSKPYLFVATQ-RSVRIYDLSKQE---------------LVKKLLT-GSKWISSMSIHPNGDNLILGSYDKKMCWFDL 636 (733)
T ss_pred ecCCCceEEEEec-cceEEEehhHHH---------------HHHHHhc-CCeeeeeeeecCCCCeEEEecCCCeeEEEEc
Confidence 6788888887765 899999974321 1233333 3457899999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEE
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd 132 (138)
.... .....+..|...++.++|++. -.++++|+.||++.|+.
T Consensus 637 dlss---------kPyk~lr~H~~avr~Va~H~r-yPLfas~sdDgtv~Vfh 678 (733)
T KOG0650|consen 637 DLSS---------KPYKTLRLHEKAVRSVAFHKR-YPLFASGSDDGTVIVFH 678 (733)
T ss_pred ccCc---------chhHHhhhhhhhhhhhhhccc-cceeeeecCCCcEEEEe
Confidence 9765 234455679999999999998 99999999999999985
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.3e-08 Score=67.57 Aligned_cols=107 Identities=16% Similarity=0.158 Sum_probs=63.3
Q ss_pred CccCCCeEEEee-CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEE-eeCCCcEEEE
Q psy14817 1 MIQTGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT-ACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s-~~~d~~i~i~ 78 (138)
|||||+.|+.++ .+|.+.||.+..... . ...+.. +...+....|+|+|..++. +..++..+||
T Consensus 255 wSPDG~~La~~~~~~g~~~Iy~~d~~~~-------------~-~~~lt~-~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~ 319 (429)
T PRK01742 255 FSPDGSRLAFASSKDGVLNIYVMGANGG-------------T-PSQLTS-GAGNNTEPSWSPDGQSILFTSDRSGSPQVY 319 (429)
T ss_pred ECCCCCEEEEEEecCCcEEEEEEECCCC-------------C-eEeecc-CCCCcCCEEECCCCCEEEEEECCCCCceEE
Confidence 689999888764 688888776532111 1 233444 4556788999999996554 4467888888
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+++..... . ... .+.. ....|+|+ ++.++..+.++ +.+||+.++
T Consensus 320 ~~~~~~~~--------~-~~l-~~~~--~~~~~SpD-G~~ia~~~~~~-i~~~Dl~~g 363 (429)
T PRK01742 320 RMSASGGG--------A-SLV-GGRG--YSAQISAD-GKTLVMINGDN-VVKQDLTSG 363 (429)
T ss_pred EEECCCCC--------e-EEe-cCCC--CCccCCCC-CCEEEEEcCCC-EEEEECCCC
Confidence 87643210 0 001 1111 23566776 66666555543 444666554
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.00 E-value=7.3e-09 Score=71.20 Aligned_cols=106 Identities=17% Similarity=0.203 Sum_probs=77.7
Q ss_pred CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeee
Q psy14817 13 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSF 92 (138)
Q Consensus 13 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~ 92 (138)
.+..+.+|...... ...+......+|...+++.+++|.+.+++++..||.|.+|.-...+. .
T Consensus 179 ~~~~~~~~~v~~~~------------~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~------~ 240 (792)
T KOG1963|consen 179 HMCKIHIYFVPKHT------------KHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSD------D 240 (792)
T ss_pred EeeeEEEEEecccc------------eeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEecccccc------c
Confidence 45677777754321 11222333344777789999999999999999999999995433110 0
Q ss_pred eeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 93 DLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 93 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
....+.+..|...|.++.|+++ +.+|++|+..+.+.+|.+.+++
T Consensus 241 ~~t~t~lHWH~~~V~~L~fS~~-G~~LlSGG~E~VLv~Wq~~T~~ 284 (792)
T KOG1963|consen 241 SETCTLLHWHHDEVNSLSFSSD-GAYLLSGGREGVLVLWQLETGK 284 (792)
T ss_pred cccceEEEecccccceeEEecC-CceEeecccceEEEEEeecCCC
Confidence 1234445678899999999999 9999999999999999988764
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.8e-09 Score=69.88 Aligned_cols=99 Identities=15% Similarity=0.191 Sum_probs=70.4
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccC
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 82 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~ 82 (138)
|-.-.+-+|...|+|.+|..... +++..+.. |.++|.+|++.++|.++++.+.|..++|||++.
T Consensus 261 P~NaVih~GhsnGtVSlWSP~sk---------------ePLvKiLc-H~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~ 324 (545)
T KOG1272|consen 261 PYNAVIHLGHSNGTVSLWSPNSK---------------EPLVKILC-HRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRN 324 (545)
T ss_pred CccceEEEcCCCceEEecCCCCc---------------chHHHHHh-cCCCcceEEECCCCcEEeecccccceeEeeecc
Confidence 44557888999999999995332 44666777 899999999999999999999999999999996
Q ss_pred CCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEE
Q psy14817 83 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 131 (138)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~w 131 (138)
.. ....... ......++++. .-++.++....|.+|
T Consensus 325 ~~---------ql~t~~t--p~~a~~ls~Sq---kglLA~~~G~~v~iw 359 (545)
T KOG1272|consen 325 FY---------QLHTYRT--PHPASNLSLSQ---KGLLALSYGDHVQIW 359 (545)
T ss_pred cc---------ccceeec--CCCcccccccc---ccceeeecCCeeeee
Confidence 43 1111111 23455566653 334444555568888
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=98.99 E-value=7.6e-09 Score=68.96 Aligned_cols=122 Identities=19% Similarity=0.209 Sum_probs=86.7
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
+.+.|++++.|.+|++|.++.... ...+..|..+++. |+.+|+.+.|-.+.+.++++ |+-|.+||...+
T Consensus 746 NENSFiSASkDKTVKLWSik~EgD--------~~~tsaCQfTY~a-Hkk~i~~igfL~~lr~i~Sc--D~giHlWDPFig 814 (1034)
T KOG4190|consen 746 NENSFISASKDKTVKLWSIKPEGD--------EIGTSACQFTYQA-HKKPIHDIGFLADLRSIASC--DGGIHLWDPFIG 814 (1034)
T ss_pred cccceeeccCCceEEEEEeccccC--------ccccceeeeEhhh-ccCcccceeeeeccceeeec--cCcceeeccccc
Confidence 457899999999999999876543 2344467888888 89999999998888877765 788999998765
Q ss_pred CCC--------------------Ccee--------------------eeeeeeeee--cccccceeEEEEccCCCCEEEE
Q psy14817 84 AGD--------------------SDMV--------------------SFDLVHTEH--RAHNQDVNCVAWNPVVPGMLAS 121 (138)
Q Consensus 84 ~~~--------------------~~~~--------------------~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~ 121 (138)
..- .... .+.+..+.. ......+.+++..+. ++.++.
T Consensus 815 r~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~-GN~lAa 893 (1034)
T KOG4190|consen 815 RLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADK-GNKLAA 893 (1034)
T ss_pred chhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccC-cchhhH
Confidence 400 0000 000001111 122345778888887 999999
Q ss_pred EeCCCcEEEEEcCCCC
Q psy14817 122 CSDDGDVKLWQIKLEN 137 (138)
Q Consensus 122 ~~~d~~v~~wd~~~~~ 137 (138)
+-.+|.|.+.|.|++.
T Consensus 894 ~LSnGci~~LDaR~G~ 909 (1034)
T KOG4190|consen 894 ALSNGCIAILDARNGK 909 (1034)
T ss_pred HhcCCcEEEEecCCCc
Confidence 9999999999999886
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=98.99 E-value=6.1e-10 Score=75.22 Aligned_cols=63 Identities=24% Similarity=0.351 Sum_probs=42.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
||.||+.||+|+.|..|.+|+.... ..++-.|...|.|+.|+|-...+++++... .-+|..
T Consensus 61 ys~dGkrFASG~aDK~VI~W~~klE------------------G~LkYSH~D~IQCMsFNP~~h~LasCsLsd-FglWS~ 121 (1081)
T KOG1538|consen 61 YAKDGKRFASGSADKSVIIWTSKLE------------------GILKYSHNDAIQCMSFNPITHQLASCSLSD-FGLWSP 121 (1081)
T ss_pred EccCCceeccCCCceeEEEeccccc------------------ceeeeccCCeeeEeecCchHHHhhhcchhh-ccccCh
Confidence 5789999999999999999995332 222223667777777777766666665432 445554
Q ss_pred cC
Q psy14817 81 NP 82 (138)
Q Consensus 81 ~~ 82 (138)
..
T Consensus 122 ~q 123 (1081)
T KOG1538|consen 122 EQ 123 (1081)
T ss_pred hh
Confidence 43
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.5e-09 Score=65.65 Aligned_cols=75 Identities=19% Similarity=0.368 Sum_probs=64.2
Q ss_pred cCeEEEEEecCCC-eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEE
Q psy14817 52 RTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKL 130 (138)
Q Consensus 52 ~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~ 130 (138)
..|.+++-+|..+ .+++|+.||.+-+||.+... .+...++.|+..++-+.|+|.++..|++++.||.+.-
T Consensus 180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~---------~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~ 250 (319)
T KOG4714|consen 180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVA---------MPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWH 250 (319)
T ss_pred ccchhhhCCcccccEEEEecCCCeEEEEEccccc---------chHHHHHHhhhhhhheeccCCCchheeEecCCCcEEE
Confidence 3588888888776 77888899999999999764 3455667899999999999988999999999999999
Q ss_pred EEcCC
Q psy14817 131 WQIKL 135 (138)
Q Consensus 131 wd~~~ 135 (138)
||..+
T Consensus 251 wdas~ 255 (319)
T KOG4714|consen 251 WDAST 255 (319)
T ss_pred EcCCC
Confidence 99864
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.1e-09 Score=67.13 Aligned_cols=108 Identities=14% Similarity=0.182 Sum_probs=76.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEE-eeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT-ACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s-~~~d~~i~i~~ 79 (138)
|||+|+++|+++.- .+-|-|.+.- +..+-+. .-..|..+.|..+..++++ ...++.|.+|+
T Consensus 16 fSp~g~yiAs~~~y-rlviRd~~tl---------------q~~qlf~--cldki~yieW~ads~~ilC~~yk~~~vqvws 77 (447)
T KOG4497|consen 16 FSPCGNYIASLSRY-RLVIRDSETL---------------QLHQLFL--CLDKIVYIEWKADSCHILCVAYKDPKVQVWS 77 (447)
T ss_pred ECCCCCeeeeeeee-EEEEeccchh---------------hHHHHHH--HHHHhhheeeeccceeeeeeeeccceEEEEE
Confidence 79999999999865 6667774221 1111121 1356788999988875544 56788999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCC-CEEEEEeCCCcEEEEEcCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP-GMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+...+ -..........+..++|+|+ + .+|.+...|-.|.+|.+.+..
T Consensus 78 l~Qpe----------w~ckIdeg~agls~~~WSPd-grhiL~tseF~lriTVWSL~t~~ 125 (447)
T KOG4497|consen 78 LVQPE----------WYCKIDEGQAGLSSISWSPD-GRHILLTSEFDLRITVWSLNTQK 125 (447)
T ss_pred eecce----------eEEEeccCCCcceeeeECCC-cceEeeeecceeEEEEEEeccce
Confidence 98654 22222356678999999999 6 566777789999999998764
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=4.9e-08 Score=64.94 Aligned_cols=107 Identities=7% Similarity=-0.014 Sum_probs=70.0
Q ss_pred CccCCCeEEEeeC---CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeE-EEeeCCCc--
Q psy14817 1 MIQTGSRLATCSD---DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACGDDA-- 74 (138)
Q Consensus 1 ~s~~~~~l~t~s~---d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~-~s~~~d~~-- 74 (138)
|||||+.|+..+. +..|.+||+..... ..+.. +.+.+...+|+|+|..+ ++.+.++.
T Consensus 209 wSpDG~~lay~s~~~g~~~i~~~dl~~g~~----------------~~l~~-~~g~~~~~~~SPDG~~la~~~~~~g~~~ 271 (435)
T PRK05137 209 FSPNRQEITYMSYANGRPRVYLLDLETGQR----------------ELVGN-FPGMTFAPRFSPDGRKVVMSLSQGGNTD 271 (435)
T ss_pred ECCCCCEEEEEEecCCCCEEEEEECCCCcE----------------EEeec-CCCcccCcEECCCCCEEEEEEecCCCce
Confidence 6899999888764 46899999754321 12233 44567788999999855 46666665
Q ss_pred EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-CC--cEEEEEcCCC
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-DG--DVKLWQIKLE 136 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~--~v~~wd~~~~ 136 (138)
|.+||+..+. ...+ ..+........|+|+ +..++..+. ++ .|.++|+.++
T Consensus 272 Iy~~d~~~~~----------~~~L-t~~~~~~~~~~~spD-G~~i~f~s~~~g~~~Iy~~d~~g~ 324 (435)
T PRK05137 272 IYTMDLRSGT----------TTRL-TDSPAIDTSPSYSPD-GSQIVFESDRSGSPQLYVMNADGS 324 (435)
T ss_pred EEEEECCCCc----------eEEc-cCCCCccCceeEcCC-CCEEEEEECCCCCCeEEEEECCCC
Confidence 6666776554 2222 234445667899999 887776653 33 5777787654
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=98.96 E-value=8.6e-09 Score=64.73 Aligned_cols=130 Identities=15% Similarity=0.218 Sum_probs=87.0
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCC---ccCC-----------------CCCCceEEeEEecCCCccCeEEEEEecCCC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAG---IPTP-----------------DNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~---~~~~-----------------~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~ 64 (138)
+..+.....|.+|++|.++....... .+.. .......|.+.+...|.-.|+++.++.|++
T Consensus 98 ~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~E 177 (433)
T KOG1354|consen 98 LAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKE 177 (433)
T ss_pred ccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccc
Confidence 45677778999999999865433221 0000 001122344455555888999999999999
Q ss_pred eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 65 ~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.++++ +|-.|.+|.+..... ..............-+..|++..|+|.+.++++..+..|+|++.|+|+..
T Consensus 178 t~lSA-DdLRINLWnlei~d~--sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~a 247 (433)
T KOG1354|consen 178 TFLSA-DDLRINLWNLEIIDQ--SFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSA 247 (433)
T ss_pred eEeec-cceeeeeccccccCC--ceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhh
Confidence 88887 567899999886431 11122211111223346789999999988999999999999999999654
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.9e-08 Score=66.04 Aligned_cols=72 Identities=13% Similarity=0.263 Sum_probs=60.7
Q ss_pred CccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEE
Q psy14817 50 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 129 (138)
Q Consensus 50 ~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~ 129 (138)
....+.+++++|+...++.|+.||+|.+||..... .. .....-.++.++|+|+ +.++++|+.-|.+.
T Consensus 258 L~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~----------t~--~~ka~~~P~~iaWHp~-gai~~V~s~qGelQ 324 (545)
T PF11768_consen 258 LPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGV----------TL--LAKAEFIPTLIAWHPD-GAIFVVGSEQGELQ 324 (545)
T ss_pred cCCcceEEecCcccceEEEEecCCeEEEEEcCCCe----------ee--eeeecccceEEEEcCC-CcEEEEEcCCceEE
Confidence 56789999999999999999999999999987653 11 1133456788999999 99999999999999
Q ss_pred EEEcC
Q psy14817 130 LWQIK 134 (138)
Q Consensus 130 ~wd~~ 134 (138)
+||+-
T Consensus 325 ~FD~A 329 (545)
T PF11768_consen 325 CFDMA 329 (545)
T ss_pred EEEee
Confidence 99974
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=98.93 E-value=2e-08 Score=63.05 Aligned_cols=85 Identities=19% Similarity=0.441 Sum_probs=72.5
Q ss_pred EEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEE
Q psy14817 41 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA 120 (138)
Q Consensus 41 ~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 120 (138)
.++.++.+ |.+.+.++.|.+....+++|..|..+.+||+.... .......+|...|..+..-+. ...++
T Consensus 188 ~~i~~~~~-h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~---------g~~~el~gh~~kV~~l~~~~~-t~~l~ 256 (404)
T KOG1409|consen 188 QLITTFNG-HTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRK---------GTAYELQGHNDKVQALSYAQH-TRQLI 256 (404)
T ss_pred ceEEEEcC-cccceEEEEEcCCCcEEEeccccCceEEEeccCCc---------ceeeeeccchhhhhhhhhhhh-heeee
Confidence 45667777 89999999999999999999999999999998665 345555688888988887776 88999
Q ss_pred EEeCCCcEEEEEcCCC
Q psy14817 121 SCSDDGDVKLWQIKLE 136 (138)
Q Consensus 121 ~~~~d~~v~~wd~~~~ 136 (138)
+++.||.|.+|+++..
T Consensus 257 S~~edg~i~~w~mn~~ 272 (404)
T KOG1409|consen 257 SCGEDGGIVVWNMNVK 272 (404)
T ss_pred eccCCCeEEEEeccce
Confidence 9999999999998754
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=98.90 E-value=5.3e-08 Score=62.42 Aligned_cols=114 Identities=7% Similarity=0.136 Sum_probs=84.6
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC-CCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-HHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
....+++.+|..+++|...|+..... +..+.. ...+.|..+..+|....|++.+.++.|.+||.
T Consensus 114 ~~~N~~~~SG~~~~~VI~HDiEt~qs---------------i~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~ 178 (609)
T KOG4227|consen 114 DLENRFLYSGERWGTVIKHDIETKQS---------------IYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDN 178 (609)
T ss_pred ccCCeeEecCCCcceeEeeeccccee---------------eeeecccCcccceeecccCCCCceEEEEecCceEEEEec
Confidence 34567899999999999999865433 333321 13468999999999889999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+....... . ++ ..........+.|+|..+.+|++.+..+-+.+||+|.++
T Consensus 179 Rd~~~~~~---~-~~---~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~ 228 (609)
T KOG4227|consen 179 RDRQNPIS---L-VL---PANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQA 228 (609)
T ss_pred cCCCCCCc---e-ee---ecCCCccceeeeecCCCceeEEeccccCCCCceeecccc
Confidence 86541100 0 01 112345678889999878899999999999999998764
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=98.90 E-value=5e-09 Score=65.62 Aligned_cols=68 Identities=18% Similarity=0.249 Sum_probs=55.2
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
-|..+.+.+|..|..+.+||+.... .....+.+ |...|..+...+.-..+.+++.||.|.+|+.+
T Consensus 206 d~~~~~LfSg~~d~~vi~wdigg~~--------------g~~~el~g-h~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn 270 (404)
T KOG1409|consen 206 DPGQRLLFSGASDHSVIMWDIGGRK--------------GTAYELQG-HNDKVQALSYAQHTRQLISCGEDGGIVVWNMN 270 (404)
T ss_pred cCCCcEEEeccccCceEEEeccCCc--------------ceeeeecc-chhhhhhhhhhhhheeeeeccCCCeEEEEecc
Confidence 4566789999999999999974322 22456667 78889999888888899999999999999998
Q ss_pred CCC
Q psy14817 82 PEA 84 (138)
Q Consensus 82 ~~~ 84 (138)
...
T Consensus 271 ~~r 273 (404)
T KOG1409|consen 271 VKR 273 (404)
T ss_pred cee
Confidence 654
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.5e-07 Score=62.60 Aligned_cols=107 Identities=15% Similarity=0.143 Sum_probs=66.2
Q ss_pred CccCCCeEEEee---CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEE-eeCCC--c
Q psy14817 1 MIQTGSRLATCS---DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT-ACGDD--A 74 (138)
Q Consensus 1 ~s~~~~~l~t~s---~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s-~~~d~--~ 74 (138)
|||||+.|+..+ .+..|.+|++..... +.+..+. +.+....|+|+|..++. .+.++ .
T Consensus 206 wSPDG~~la~~s~~~g~~~i~i~dl~~G~~-------------~~l~~~~----~~~~~~~~SPDG~~La~~~~~~g~~~ 268 (429)
T PRK03629 206 WSPDGSKLAYVTFESGRSALVIQTLANGAV-------------RQVASFP----RHNGAPAFSPDGSKLAFALSKTGSLN 268 (429)
T ss_pred EcCCCCEEEEEEecCCCcEEEEEECCCCCe-------------EEccCCC----CCcCCeEECCCCCEEEEEEcCCCCcE
Confidence 689999988654 245788888743221 2222222 23456899999996654 34454 4
Q ss_pred EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-CCcEEEE--EcCCC
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-DGDVKLW--QIKLE 136 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~v~~w--d~~~~ 136 (138)
|.+||+..+. ..... .+...+....|+|+ ++.|+..+. ++...+| |+.++
T Consensus 269 I~~~d~~tg~----------~~~lt-~~~~~~~~~~wSPD-G~~I~f~s~~~g~~~Iy~~d~~~g 321 (429)
T PRK03629 269 LYVMDLASGQ----------IRQVT-DGRSNNTEPTWFPD-SQNLAYTSDQAGRPQVYKVNINGG 321 (429)
T ss_pred EEEEECCCCC----------EEEcc-CCCCCcCceEECCC-CCEEEEEeCCCCCceEEEEECCCC
Confidence 8888887654 22222 33446678899999 887766654 4444555 55443
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.1e-07 Score=62.01 Aligned_cols=107 Identities=13% Similarity=0.029 Sum_probs=67.4
Q ss_pred CccCCCeEEEeeCC---CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeE-EEeeCCC--c
Q psy14817 1 MIQTGSRLATCSDD---ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACGDD--A 74 (138)
Q Consensus 1 ~s~~~~~l~t~s~d---~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~-~s~~~d~--~ 74 (138)
|+|+|+.|+..+.+ ..|.+|++..... +.+. . ..+.....+|+|+|..+ ++.+.++ .
T Consensus 211 wSpDg~~la~~s~~~~~~~l~~~dl~~g~~-------------~~l~---~-~~g~~~~~~~SpDG~~l~~~~s~~g~~~ 273 (433)
T PRK04922 211 WSPDGKKLAYVSFERGRSAIYVQDLATGQR-------------ELVA---S-FRGINGAPSFSPDGRRLALTLSRDGNPE 273 (433)
T ss_pred CCCCCCEEEEEecCCCCcEEEEEECCCCCE-------------EEec---c-CCCCccCceECCCCCEEEEEEeCCCCce
Confidence 78999999988743 4688999743321 2222 2 23344578999999855 4555555 4
Q ss_pred EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe-CCCc--EEEEEcCCC
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS-DDGD--VKLWQIKLE 136 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~--v~~wd~~~~ 136 (138)
|.+|++..+. .... ..+.......+|+|+ ++.++.++ .++. |.++++.++
T Consensus 274 Iy~~d~~~g~----------~~~l-t~~~~~~~~~~~spD-G~~l~f~sd~~g~~~iy~~dl~~g 326 (433)
T PRK04922 274 IYVMDLGSRQ----------LTRL-TNHFGIDTEPTWAPD-GKSIYFTSDRGGRPQIYRVAASGG 326 (433)
T ss_pred EEEEECCCCC----------eEEC-ccCCCCccceEECCC-CCEEEEEECCCCCceEEEEECCCC
Confidence 8888887654 2222 233344567899999 88776665 4555 555565544
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=98.89 E-value=3.4e-08 Score=62.75 Aligned_cols=116 Identities=13% Similarity=0.150 Sum_probs=80.7
Q ss_pred CeEEEeeCC--CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC--CCeEEEeeCCCcEEEEecc
Q psy14817 6 SRLATCSDD--ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL--TDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 6 ~~l~t~s~d--~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~s~~~d~~i~i~~~~ 81 (138)
..+|+|+.. ..++|||++...+.....-. ++-. + .+. -.-.++++.|-+. ...|++++.-+.+++||.+
T Consensus 162 ~Iva~GGke~~n~lkiwdle~~~qiw~aKNv---pnD~-L-~Lr--VPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~ 234 (412)
T KOG3881|consen 162 YIVATGGKENINELKIWDLEQSKQIWSAKNV---PNDR-L-GLR--VPVWITDIRFLEGSPNYKFATITRYHQVRLYDTR 234 (412)
T ss_pred ceEecCchhcccceeeeecccceeeeeccCC---CCcc-c-cce--eeeeeccceecCCCCCceEEEEecceeEEEecCc
Confidence 467779988 89999998765321111000 0000 0 000 1235678888887 6799999999999999999
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 138 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~ 138 (138)
.... +...+.-.+.+++++...|. ++++++|..-+.+..||+|++.+
T Consensus 235 ~qRR---------PV~~fd~~E~~is~~~l~p~-gn~Iy~gn~~g~l~~FD~r~~kl 281 (412)
T KOG3881|consen 235 HQRR---------PVAQFDFLENPISSTGLTPS-GNFIYTGNTKGQLAKFDLRGGKL 281 (412)
T ss_pred ccCc---------ceeEeccccCcceeeeecCC-CcEEEEecccchhheecccCcee
Confidence 6541 12222234678999999999 99999999999999999998764
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.1e-07 Score=63.18 Aligned_cols=112 Identities=15% Similarity=0.111 Sum_probs=69.1
Q ss_pred CccCCCeEE-EeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee-CCCcEEEE
Q psy14817 1 MIQTGSRLA-TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~-t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~-~d~~i~i~ 78 (138)
|||||+.|+ +.+.++...||.+..... ....+.. +........|+|+|+.++..+ .++...+|
T Consensus 247 ~SPDG~~la~~~~~~g~~~Iy~~d~~~~--------------~~~~lt~-~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy 311 (427)
T PRK02889 247 WSPDGRTLAVALSRDGNSQIYTVNADGS--------------GLRRLTQ-SSGIDTEPFFSPDGRSIYFTSDRGGAPQIY 311 (427)
T ss_pred ECCCCCEEEEEEccCCCceEEEEECCCC--------------CcEECCC-CCCCCcCeEEcCCCCEEEEEecCCCCcEEE
Confidence 689998876 677888888887643211 0233333 344456678999999666544 45667777
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCC---cEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG---DVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~---~v~~wd~~~~~ 137 (138)
.+...... ..... ..........|+|+ +++++..+.++ .|.+||+.+++
T Consensus 312 ~~~~~~g~--------~~~lt-~~g~~~~~~~~SpD-G~~Ia~~s~~~g~~~I~v~d~~~g~ 363 (427)
T PRK02889 312 RMPASGGA--------AQRVT-FTGSYNTSPRISPD-GKLLAYISRVGGAFKLYVQDLATGQ 363 (427)
T ss_pred EEECCCCc--------eEEEe-cCCCCcCceEECCC-CCEEEEEEccCCcEEEEEEECCCCC
Confidence 66532200 11111 11223345789999 88888776554 59999987654
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=98.88 E-value=7.3e-07 Score=55.62 Aligned_cols=68 Identities=19% Similarity=0.267 Sum_probs=54.5
Q ss_pred ccCCCeEEEeeCCCc-EEEeeccCCCCCCCccCCCCCCceEEeEEecC-CCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 2 IQTGSRLATCSDDAT-VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-HHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 2 s~~~~~l~t~s~d~~-v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
+.+|..+||+|..|+ |||||..... .+.+++. .....|.+++|+|+..+++.+++.|++.||.
T Consensus 190 n~~Gt~vATaStkGTLIRIFdt~~g~---------------~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~ 254 (346)
T KOG2111|consen 190 NLQGTLVATASTKGTLIRIFDTEDGT---------------LLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFS 254 (346)
T ss_pred cCCccEEEEeccCcEEEEEEEcCCCc---------------EeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEE
Confidence 468999999999985 6899975543 3444433 2356899999999999999999999999999
Q ss_pred ccCCC
Q psy14817 80 ENPEA 84 (138)
Q Consensus 80 ~~~~~ 84 (138)
++...
T Consensus 255 l~~~~ 259 (346)
T KOG2111|consen 255 LRDTE 259 (346)
T ss_pred eecCC
Confidence 88643
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.1e-07 Score=63.10 Aligned_cols=106 Identities=14% Similarity=0.167 Sum_probs=65.9
Q ss_pred CccCCCeEEEeeCC---CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEE-EeeCCCcEE
Q psy14817 1 MIQTGSRLATCSDD---ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA-TACGDDAIR 76 (138)
Q Consensus 1 ~s~~~~~l~t~s~d---~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~-s~~~d~~i~ 76 (138)
|||+|+.|+..+.+ ..|.+||+..... ..+ .. ..+......|+|+|..++ +.+.++...
T Consensus 203 wSPDG~~la~~s~~~~~~~I~~~dl~~g~~-------------~~l---~~-~~g~~~~~~~SPDG~~la~~~~~~g~~~ 265 (427)
T PRK02889 203 WSPDGTKLAYVSFESKKPVVYVHDLATGRR-------------RVV---AN-FKGSNSAPAWSPDGRTLAVALSRDGNSQ 265 (427)
T ss_pred EcCCCCEEEEEEccCCCcEEEEEECCCCCE-------------EEe---ec-CCCCccceEECCCCCEEEEEEccCCCce
Confidence 68999999877643 3588999754321 122 22 234556889999998665 567788777
Q ss_pred EEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-CCcEEEEEc
Q psy14817 77 IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-DGDVKLWQI 133 (138)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~v~~wd~ 133 (138)
+|.++..... ... ...+........|+|+ ++.++..+. ++...+|.+
T Consensus 266 Iy~~d~~~~~--------~~~-lt~~~~~~~~~~wSpD-G~~l~f~s~~~g~~~Iy~~ 313 (427)
T PRK02889 266 IYTVNADGSG--------LRR-LTQSSGIDTEPFFSPD-GRSIYFTSDRGGAPQIYRM 313 (427)
T ss_pred EEEEECCCCC--------cEE-CCCCCCCCcCeEEcCC-CCEEEEEecCCCCcEEEEE
Confidence 7765532200 111 1233344566789999 887765553 566667654
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=4.1e-07 Score=60.55 Aligned_cols=108 Identities=9% Similarity=0.073 Sum_probs=65.5
Q ss_pred CccCCCeEEEe-eCCC--cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC-CCcEE
Q psy14817 1 MIQTGSRLATC-SDDA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-DDAIR 76 (138)
Q Consensus 1 ~s~~~~~l~t~-s~d~--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~-d~~i~ 76 (138)
|||||+.|+.. +.++ .|.+||+.... ...+.. +...+....|+|+|..++..+. ++...
T Consensus 250 ~SPDG~~La~~~~~~g~~~I~~~d~~tg~----------------~~~lt~-~~~~~~~~~wSPDG~~I~f~s~~~g~~~ 312 (429)
T PRK03629 250 FSPDGSKLAFALSKTGSLNLYVMDLASGQ----------------IRQVTD-GRSNNTEPTWFPDSQNLAYTSDQAGRPQ 312 (429)
T ss_pred ECCCCCEEEEEEcCCCCcEEEEEECCCCC----------------EEEccC-CCCCcCceEECCCCCEEEEEeCCCCCce
Confidence 68999988754 4455 47778864321 222333 3445678999999997765554 45555
Q ss_pred EE--eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC---CcEEEEEcCCCC
Q psy14817 77 IF--KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD---GDVKLWQIKLEN 137 (138)
Q Consensus 77 i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---~~v~~wd~~~~~ 137 (138)
+| ++..+. ..... ..........|+|+ +..++..+.+ ..|.+||+.+++
T Consensus 313 Iy~~d~~~g~----------~~~lt-~~~~~~~~~~~SpD-G~~Ia~~~~~~g~~~I~~~dl~~g~ 366 (429)
T PRK03629 313 VYKVNINGGA----------PQRIT-WEGSQNQDADVSSD-GKFMVMVSSNGGQQHIAKQDLATGG 366 (429)
T ss_pred EEEEECCCCC----------eEEee-cCCCCccCEEECCC-CCEEEEEEccCCCceEEEEECCCCC
Confidence 66 444332 11111 22334557889999 8887766543 357888887654
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=98.83 E-value=3.2e-07 Score=58.25 Aligned_cols=96 Identities=18% Similarity=0.223 Sum_probs=68.1
Q ss_pred CccCCCeEEEeeC-CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~-d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|.+||..+++++. |.+|+|||...... .++..+ ..+.+.-+.|+|++.+++++.-|+..++|.
T Consensus 203 wn~dgt~l~tAS~gsssi~iWdpdtg~~-------------~pL~~~---glgg~slLkwSPdgd~lfaAt~davfrlw~ 266 (445)
T KOG2139|consen 203 WNEDGTILVTASFGSSSIMIWDPDTGQK-------------IPLIPK---GLGGFSLLKWSPDGDVLFAATCDAVFRLWQ 266 (445)
T ss_pred EcCCCCEEeecccCcceEEEEcCCCCCc-------------cccccc---CCCceeeEEEcCCCCEEEEecccceeeeeh
Confidence 4678999998885 67999999755443 223321 245788899999999999999999999996
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 123 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 123 (138)
....- ...+.. -..+.|....|+|. +.+|+.++
T Consensus 267 e~q~w---------t~erw~-lgsgrvqtacWspc-GsfLLf~~ 299 (445)
T KOG2139|consen 267 ENQSW---------TKERWI-LGSGRVQTACWSPC-GSFLLFAC 299 (445)
T ss_pred hcccc---------eeccee-ccCCceeeeeecCC-CCEEEEEE
Confidence 55432 122222 23348999999999 77655444
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.4e-08 Score=65.17 Aligned_cols=115 Identities=20% Similarity=0.275 Sum_probs=86.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCC--CeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT--DLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~s~~~d~~i~i~ 78 (138)
|+..|..+++||.|..|.+||-..... ...+...|...|..-.|-|.. .-+++++.||.+++=
T Consensus 150 FN~~Gd~l~SgSDD~~vv~WdW~~~~~---------------~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s 214 (559)
T KOG1334|consen 150 FNQRGDVLASGSDDLQVVVWDWVSGSP---------------KLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVS 214 (559)
T ss_pred ecccCceeeccCccceEEeehhhccCc---------------ccccccccccchhhhhccCCCCCcCceeccccCceeee
Confidence 567899999999999999999644332 333443377777777787765 478999999999987
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.+.... ... .......|.+.|..++..|+....|.+++.|+.+.-+|+++..
T Consensus 215 ~i~~t~-----~~e--~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~ 266 (559)
T KOG1334|consen 215 EILETG-----YVE--NTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDV 266 (559)
T ss_pred eecccc-----cee--cceecccccCccceeeecCCCCCcccccccccceeeeeeccCC
Confidence 776443 000 0112247899999999999978899999999999999998763
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=5.2e-07 Score=60.12 Aligned_cols=108 Identities=14% Similarity=0.106 Sum_probs=65.4
Q ss_pred CccCCCeEE-EeeCCC--cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee-CCCc--
Q psy14817 1 MIQTGSRLA-TCSDDA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDA-- 74 (138)
Q Consensus 1 ~s~~~~~l~-t~s~d~--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~-~d~~-- 74 (138)
|||+|+.|+ +.+.++ .|.+||+.... +..+.. +........|+|++..++..+ .++.
T Consensus 255 ~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~----------------~~~lt~-~~~~~~~~~~spDG~~l~f~sd~~g~~~ 317 (433)
T PRK04922 255 FSPDGRRLALTLSRDGNPEIYVMDLGSRQ----------------LTRLTN-HFGIDTEPTWAPDGKSIYFTSDRGGRPQ 317 (433)
T ss_pred ECCCCCEEEEEEeCCCCceEEEEECCCCC----------------eEECcc-CCCCccceEECCCCCEEEEEECCCCCce
Confidence 689998775 555666 58888864321 223333 334456789999999766554 4555
Q ss_pred EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCC---cEEEEEcCCCC
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG---DVKLWQIKLEN 137 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~---~v~~wd~~~~~ 137 (138)
|.++++..+. ..... .+.......+|+|+ ++.++..+.++ .|.+||+.+++
T Consensus 318 iy~~dl~~g~----------~~~lt-~~g~~~~~~~~SpD-G~~Ia~~~~~~~~~~I~v~d~~~g~ 371 (433)
T PRK04922 318 IYRVAASGGS----------AERLT-FQGNYNARASVSPD-GKKIAMVHGSGGQYRIAVMDLSTGS 371 (433)
T ss_pred EEEEECCCCC----------eEEee-cCCCCccCEEECCC-CCEEEEEECCCCceeEEEEECCCCC
Confidence 4555554433 11111 12233456899999 88887665433 58999987654
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=98.81 E-value=2e-07 Score=58.79 Aligned_cols=122 Identities=19% Similarity=0.270 Sum_probs=81.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC-----------CccCeEEEEEecCCC--eEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-----------HGRTIYDISWCHLTD--LIA 67 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~v~~v~~~~~~~--~~~ 67 (138)
|...|.+||||..+|.|-++.-...... .+.....++.| -...|..++|.+++. .++
T Consensus 33 f~~~Ge~LatGdkgGRVv~f~r~~~~~~----------ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FL 102 (433)
T KOG1354|consen 33 FDHYGERLATGDKGGRVVLFEREKLYKG----------EYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFL 102 (433)
T ss_pred eecccceEeecCCCCeEEEeeccccccc----------ceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEE
Confidence 4567999999999999999985433221 11122222221 145788999999886 677
Q ss_pred EeeCCCcEEEEeccCCCCCC--------------------------ceeeeeeeeeeecccccceeEEEEccCCCCEEEE
Q psy14817 68 TACGDDAIRIFKENPEAGDS--------------------------DMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLAS 121 (138)
Q Consensus 68 s~~~d~~i~i~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 121 (138)
....|.+|++|.+....... ......+......+|..-|+++.++.+ ...+++
T Consensus 103 lstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD-~Et~lS 181 (433)
T KOG1354|consen 103 LSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSD-KETFLS 181 (433)
T ss_pred EecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCc-cceEee
Confidence 77889999999887543111 001111122223468889999999998 888887
Q ss_pred EeCCCcEEEEEcC
Q psy14817 122 CSDDGDVKLWQIK 134 (138)
Q Consensus 122 ~~~d~~v~~wd~~ 134 (138)
+. |-.|.+|.+.
T Consensus 182 AD-dLRINLWnle 193 (433)
T KOG1354|consen 182 AD-DLRINLWNLE 193 (433)
T ss_pred cc-ceeeeecccc
Confidence 75 7789999764
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=98.81 E-value=3.9e-07 Score=59.41 Aligned_cols=104 Identities=11% Similarity=0.092 Sum_probs=70.1
Q ss_pred CeE-EEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCC
Q psy14817 6 SRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 6 ~~l-~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
+++ ++-..++.|.+.|... .+.+..+.. ....-..+.++|++++++.++.|+.|.++|+...+
T Consensus 6 ~l~~V~~~~~~~v~viD~~t---------------~~~~~~i~~-~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~ 69 (369)
T PF02239_consen 6 NLFYVVERGSGSVAVIDGAT---------------NKVVARIPT-GGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGK 69 (369)
T ss_dssp GEEEEEEGGGTEEEEEETTT----------------SEEEEEE--STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSS
T ss_pred cEEEEEecCCCEEEEEECCC---------------CeEEEEEcC-CCCceeEEEecCCCCEEEEEcCCCeEEEEECCccc
Confidence 344 5667889999999533 244667765 33333447789999988888999999999999876
Q ss_pred CCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe-CCCcEEEEEcCCCC
Q psy14817 85 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS-DDGDVKLWQIKLEN 137 (138)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~v~~wd~~~~~ 137 (138)
..... .-......++++++ +++++.++ .++.+.++|.++.+
T Consensus 70 ----------~v~~i-~~G~~~~~i~~s~D-G~~~~v~n~~~~~v~v~D~~tle 111 (369)
T PF02239_consen 70 ----------VVATI-KVGGNPRGIAVSPD-GKYVYVANYEPGTVSVIDAETLE 111 (369)
T ss_dssp ----------EEEEE-E-SSEEEEEEE--T-TTEEEEEEEETTEEEEEETTT--
T ss_pred ----------EEEEE-ecCCCcceEEEcCC-CCEEEEEecCCCceeEecccccc
Confidence 33222 23345678999999 88887665 58999999988754
|
... |
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=98.81 E-value=5.3e-07 Score=59.67 Aligned_cols=107 Identities=12% Similarity=0.081 Sum_probs=66.0
Q ss_pred CccCCCeEEEeeCC---CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEE-EeeCCC--c
Q psy14817 1 MIQTGSRLATCSDD---ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA-TACGDD--A 74 (138)
Q Consensus 1 ~s~~~~~l~t~s~d---~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~-s~~~d~--~ 74 (138)
|||+|++|+.++.+ ..|.+|++..... . .+.. +...+.++.|+|++..++ +.+.++ .
T Consensus 197 ~Spdg~~la~~~~~~~~~~i~v~d~~~g~~-------------~---~~~~-~~~~~~~~~~spDg~~l~~~~~~~~~~~ 259 (417)
T TIGR02800 197 WSPDGQKLAYVSFESGKPEIYVQDLATGQR-------------E---KVAS-FPGMNGAPAFSPDGSKLAVSLSKDGNPD 259 (417)
T ss_pred CCCCCCEEEEEEcCCCCcEEEEEECCCCCE-------------E---Eeec-CCCCccceEECCCCCEEEEEECCCCCcc
Confidence 68999999887654 4789999743211 1 1222 344566789999998554 444444 4
Q ss_pred EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-CC--cEEEEEcCCC
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-DG--DVKLWQIKLE 136 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~--~v~~wd~~~~ 136 (138)
|.+|++..+. ..... .+........|+|+ ++.|+.++. ++ .|.++|+.++
T Consensus 260 i~~~d~~~~~----------~~~l~-~~~~~~~~~~~s~d-g~~l~~~s~~~g~~~iy~~d~~~~ 312 (417)
T TIGR02800 260 IYVMDLDGKQ----------LTRLT-NGPGIDTEPSWSPD-GKSIAFTSDRGGSPQIYMMDADGG 312 (417)
T ss_pred EEEEECCCCC----------EEECC-CCCCCCCCEEECCC-CCEEEEEECCCCCceEEEEECCCC
Confidence 7888877544 22221 23334456789998 877765543 33 4667776654
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=98.79 E-value=3.8e-09 Score=72.89 Aligned_cols=81 Identities=21% Similarity=0.364 Sum_probs=71.5
Q ss_pred EecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC
Q psy14817 45 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124 (138)
Q Consensus 45 ~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 124 (138)
.+.+ |...|.|+.|...|.++++|++|..++||...... +.....+|.+.|+.++.+.+ ..++++++.
T Consensus 185 rLlg-H~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~----------~lAs~rGhs~ditdlavs~~-n~~iaaaS~ 252 (1113)
T KOG0644|consen 185 RLLG-HRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETAR----------CLASCRGHSGDITDLAVSSN-NTMIAAASN 252 (1113)
T ss_pred HHHh-hhhheeeeeeccccceEeecCccceeeeeeccchh----------hhccCCCCccccchhccchh-hhhhhhccc
Confidence 3445 88899999999999999999999999999988766 55666799999999999887 888999999
Q ss_pred CCcEEEEEcCCCC
Q psy14817 125 DGDVKLWQIKLEN 137 (138)
Q Consensus 125 d~~v~~wd~~~~~ 137 (138)
|..|++|-++.+.
T Consensus 253 D~vIrvWrl~~~~ 265 (1113)
T KOG0644|consen 253 DKVIRVWRLPDGA 265 (1113)
T ss_pred CceEEEEecCCCc
Confidence 9999999998764
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.6e-07 Score=66.46 Aligned_cols=92 Identities=15% Similarity=0.224 Sum_probs=69.0
Q ss_pred ceEEeEEecCCCccCeEEEEEecCC-CeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCC
Q psy14817 39 VWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG 117 (138)
Q Consensus 39 ~~~~~~~~~~~~~~~v~~v~~~~~~-~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 117 (138)
.+..+..+.. |...+..++.++.. .+|++|+.||+|++|+.+...+.......... .......+.++.+.+. ++
T Consensus 1037 ~G~lVAhL~E-hs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~lt---ys~~~sr~~~vt~~~~-~~ 1111 (1431)
T KOG1240|consen 1037 RGILVAHLHE-HSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELT---YSPEGSRVEKVTMCGN-GD 1111 (1431)
T ss_pred cceEeehhhh-ccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEE---EeccCCceEEEEeccC-CC
Confidence 3455666666 78888888887766 79999999999999999976533222222111 1235678888888888 99
Q ss_pred EEEEEeCCCcEEEEEcCC
Q psy14817 118 MLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 118 ~l~~~~~d~~v~~wd~~~ 135 (138)
.++.++.||.|++.++..
T Consensus 1112 ~~Av~t~DG~v~~~~id~ 1129 (1431)
T KOG1240|consen 1112 QFAVSTKDGSVRVLRIDH 1129 (1431)
T ss_pred eEEEEcCCCeEEEEEccc
Confidence 999999999999998865
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.73 E-value=2.7e-07 Score=61.66 Aligned_cols=66 Identities=9% Similarity=0.138 Sum_probs=52.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
++|+...++.|+.||+|.+||...... .... ..-..+.++|+|+|..++.|+..|.+++||+
T Consensus 267 ~sp~E~kLvlGC~DgSiiLyD~~~~~t-----------------~~~k-a~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ 328 (545)
T PF11768_consen 267 RSPSEDKLVLGCEDGSIILYDTTRGVT-----------------LLAK-AEFIPTLIAWHPDGAIFVVGSEQGELQCFDM 328 (545)
T ss_pred cCcccceEEEEecCCeEEEEEcCCCee-----------------eeee-ecccceEEEEcCCCcEEEEEcCCceEEEEEe
Confidence 478899999999999999999643311 1111 3445689999999999999999999999999
Q ss_pred cCCC
Q psy14817 81 NPEA 84 (138)
Q Consensus 81 ~~~~ 84 (138)
....
T Consensus 329 ALsp 332 (545)
T PF11768_consen 329 ALSP 332 (545)
T ss_pred ecCc
Confidence 8654
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.6e-06 Score=57.70 Aligned_cols=112 Identities=13% Similarity=0.115 Sum_probs=67.6
Q ss_pred CccCCCeEEEee-CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCC---CcEE
Q psy14817 1 MIQTGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD---DAIR 76 (138)
Q Consensus 1 ~s~~~~~l~t~s-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d---~~i~ 76 (138)
|||||+.|+..+ .++...+|.+...... .....+.. +...+....|+|+|+.++....+ ..|.
T Consensus 288 wSPDG~~Laf~s~~~g~~~ly~~~~~~~g------------~~~~~lt~-~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~ 354 (428)
T PRK01029 288 FSPDGTRLVFVSNKDGRPRIYIMQIDPEG------------QSPRLLTK-KYRNSSCPAWSPDGKKIAFCSVIKGVRQIC 354 (428)
T ss_pred ECCCCCEEEEEECCCCCceEEEEECcccc------------cceEEecc-CCCCccceeECCCCCEEEEEEcCCCCcEEE
Confidence 689999877665 4676777764321100 01222333 33456788999999977655432 3588
Q ss_pred EEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe-C--CCcEEEEEcCCCC
Q psy14817 77 IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS-D--DGDVKLWQIKLEN 137 (138)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~--d~~v~~wd~~~~~ 137 (138)
+||+..+. ..... .....+....|+|+ ++.|+... . ...|.++|+.+++
T Consensus 355 v~dl~~g~----------~~~Lt-~~~~~~~~p~wSpD-G~~L~f~~~~~g~~~L~~vdl~~g~ 406 (428)
T PRK01029 355 VYDLATGR----------DYQLT-TSPENKESPSWAID-SLHLVYSAGNSNESELYLISLITKK 406 (428)
T ss_pred EEECCCCC----------eEEcc-CCCCCccceEECCC-CCEEEEEECCCCCceEEEEECCCCC
Confidence 99887665 22222 22235567899999 87766433 2 3567788876653
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.3e-06 Score=58.24 Aligned_cols=107 Identities=12% Similarity=0.061 Sum_probs=64.6
Q ss_pred CccCCCeEEEeeCC---CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEE-EeeCCC--c
Q psy14817 1 MIQTGSRLATCSDD---ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA-TACGDD--A 74 (138)
Q Consensus 1 ~s~~~~~l~t~s~d---~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~-s~~~d~--~ 74 (138)
|||+|+.|+..+.+ ..|.+|++..... +.+ .. ..+.+....|+|+|..++ +...++ .
T Consensus 206 wSpDG~~la~~s~~~~~~~l~~~~l~~g~~-------------~~l---~~-~~g~~~~~~~SpDG~~la~~~~~~g~~~ 268 (430)
T PRK00178 206 WSPDGKRIAYVSFEQKRPRIFVQNLDTGRR-------------EQI---TN-FEGLNGAPAWSPDGSKLAFVLSKDGNPE 268 (430)
T ss_pred ECCCCCEEEEEEcCCCCCEEEEEECCCCCE-------------EEc---cC-CCCCcCCeEECCCCCEEEEEEccCCCce
Confidence 68999998876644 3577888643321 112 22 233445689999998665 555555 4
Q ss_pred EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe-CCC--cEEEEEcCCC
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS-DDG--DVKLWQIKLE 136 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~--~v~~wd~~~~ 136 (138)
|.++|+..+. .... ..+........|+|+ +..++..+ .++ .|.++++.++
T Consensus 269 Iy~~d~~~~~----------~~~l-t~~~~~~~~~~~spD-g~~i~f~s~~~g~~~iy~~d~~~g 321 (430)
T PRK00178 269 IYVMDLASRQ----------LSRV-TNHPAIDTEPFWGKD-GRTLYFTSDRGGKPQIYKVNVNGG 321 (430)
T ss_pred EEEEECCCCC----------eEEc-ccCCCCcCCeEECCC-CCEEEEEECCCCCceEEEEECCCC
Confidence 7777887654 2222 233344566789999 77665544 344 4666676554
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.1e-06 Score=52.73 Aligned_cols=119 Identities=10% Similarity=-0.007 Sum_probs=81.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
++++++++++.++...|..|.+..... ..+......-...-.+..|+.....++++..||++.|||+
T Consensus 166 ~snd~~~~~~Vgds~~Vf~y~id~~se-------------y~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DV 232 (344)
T KOG4532|consen 166 YSNDPSWGSSVGDSRRVFRYAIDDESE-------------YIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDV 232 (344)
T ss_pred EcCCCceEEEecCCCcceEEEeCCccc-------------eeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEe
Confidence 478999999999999999998754322 2222122213445678899999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCC-CCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV-PGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+....+ +.. .......|.+.+..+.|++-. -++|+..-.=+.+.+.|+|+..
T Consensus 233 R~~~tp---m~~--~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~ 285 (344)
T KOG4532|consen 233 RNMATP---MAE--ISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYV 285 (344)
T ss_pred cccccc---hhh--hcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCc
Confidence 975411 111 111122478899999999741 2355555556678888888753
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.68 E-value=7.4e-08 Score=61.34 Aligned_cols=68 Identities=13% Similarity=0.172 Sum_probs=54.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
+|||+++|+|+..|+.|||-.+..... +..+...|+..|..++.-++ +.|++++.|+++++||+
T Consensus 159 vS~D~~~IitaDRDEkIRvs~ypa~f~---------------IesfclGH~eFVS~isl~~~-~~LlS~sGD~tlr~Wd~ 222 (390)
T KOG3914|consen 159 VSPDDQFIITADRDEKIRVSRYPATFV---------------IESFCLGHKEFVSTISLTDN-YLLLSGSGDKTLRLWDI 222 (390)
T ss_pred ecCCCCEEEEecCCceEEEEecCcccc---------------hhhhccccHhheeeeeeccC-ceeeecCCCCcEEEEec
Confidence 689999999999999999987643322 33333338999999998754 45899999999999999
Q ss_pred cCCC
Q psy14817 81 NPEA 84 (138)
Q Consensus 81 ~~~~ 84 (138)
..++
T Consensus 223 ~sgk 226 (390)
T KOG3914|consen 223 TSGK 226 (390)
T ss_pred ccCC
Confidence 9886
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=2e-06 Score=57.65 Aligned_cols=107 Identities=15% Similarity=0.101 Sum_probs=62.6
Q ss_pred CccCCCeEEEeeC-CC--cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEE-EeeCCCc--
Q psy14817 1 MIQTGSRLATCSD-DA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA-TACGDDA-- 74 (138)
Q Consensus 1 ~s~~~~~l~t~s~-d~--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~-s~~~d~~-- 74 (138)
|||||+.|+..+. ++ .|.+||+..... +.+..+. +......|+|+|..++ +...++.
T Consensus 225 wSPDG~~La~~s~~~g~~~L~~~dl~tg~~-------------~~lt~~~----g~~~~~~wSPDG~~La~~~~~~g~~~ 287 (448)
T PRK04792 225 WSPDGRKLAYVSFENRKAEIFVQDIYTQVR-------------EKVTSFP----GINGAPRFSPDGKKLALVLSKDGQPE 287 (448)
T ss_pred ECCCCCEEEEEEecCCCcEEEEEECCCCCe-------------EEecCCC----CCcCCeeECCCCCEEEEEEeCCCCeE
Confidence 6899998887654 33 466777643211 2222222 2334689999999554 4566665
Q ss_pred EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe-CCCc--EEEEEcCCC
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS-DDGD--VKLWQIKLE 136 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~--v~~wd~~~~ 136 (138)
|.++|+..+. .... ..+........|+|+ ++.++..+ .++. |.++|+.++
T Consensus 288 Iy~~dl~tg~----------~~~l-t~~~~~~~~p~wSpD-G~~I~f~s~~~g~~~Iy~~dl~~g 340 (448)
T PRK04792 288 IYVVDIATKA----------LTRI-TRHRAIDTEPSWHPD-GKSLIFTSERGGKPQIYRVNLASG 340 (448)
T ss_pred EEEEECCCCC----------eEEC-ccCCCCccceEECCC-CCEEEEEECCCCCceEEEEECCCC
Confidence 6666766543 2222 233345567899999 77665544 3444 555566544
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.9e-06 Score=56.20 Aligned_cols=107 Identities=16% Similarity=0.212 Sum_probs=65.1
Q ss_pred CccCCCeEE-EeeCCC--cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC-CC--c
Q psy14817 1 MIQTGSRLA-TCSDDA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-DD--A 74 (138)
Q Consensus 1 ~s~~~~~l~-t~s~d~--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~-d~--~ 74 (138)
|+|+|+.|+ +.+.++ .|.+|++.... ...+.. +........|+|++..++..+. .+ .
T Consensus 241 ~spDg~~l~~~~~~~~~~~i~~~d~~~~~----------------~~~l~~-~~~~~~~~~~s~dg~~l~~~s~~~g~~~ 303 (417)
T TIGR02800 241 FSPDGSKLAVSLSKDGNPDIYVMDLDGKQ----------------LTRLTN-GPGIDTEPSWSPDGKSIAFTSDRGGSPQ 303 (417)
T ss_pred ECCCCCEEEEEECCCCCccEEEEECCCCC----------------EEECCC-CCCCCCCEEECCCCCEEEEEECCCCCce
Confidence 689998765 445554 47777764321 122222 3333456789999997665443 44 4
Q ss_pred EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCC---cEEEEEcCCC
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG---DVKLWQIKLE 136 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~---~v~~wd~~~~ 136 (138)
|.++++..+. .... ..+...+....|+|+ +..++.++.++ .|.+||+.++
T Consensus 304 iy~~d~~~~~----------~~~l-~~~~~~~~~~~~spd-g~~i~~~~~~~~~~~i~~~d~~~~ 356 (417)
T TIGR02800 304 IYMMDADGGE----------VRRL-TFRGGYNASPSWSPD-GDLIAFVHREGGGFNIAVMDLDGG 356 (417)
T ss_pred EEEEECCCCC----------EEEe-ecCCCCccCeEECCC-CCEEEEEEccCCceEEEEEeCCCC
Confidence 6666665433 1111 123445677889999 88888877765 7888887654
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=4e-06 Score=56.01 Aligned_cols=107 Identities=7% Similarity=0.053 Sum_probs=64.9
Q ss_pred CccCCCeEE-EeeCCCc--EEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee-CCC--c
Q psy14817 1 MIQTGSRLA-TCSDDAT--VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDD--A 74 (138)
Q Consensus 1 ~s~~~~~l~-t~s~d~~--v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~-~d~--~ 74 (138)
|||+|+.|+ +.+.++. |.+||+.... ...+.. +........|+|++..++..+ .++ .
T Consensus 253 ~SPDG~~la~~~~~~g~~~Iy~~d~~~~~----------------~~~Lt~-~~~~~~~~~~spDG~~i~f~s~~~g~~~ 315 (435)
T PRK05137 253 FSPDGRKVVMSLSQGGNTDIYTMDLRSGT----------------TTRLTD-SPAIDTSPSYSPDGSQIVFESDRSGSPQ 315 (435)
T ss_pred ECCCCCEEEEEEecCCCceEEEEECCCCc----------------eEEccC-CCCccCceeEcCCCCEEEEEECCCCCCe
Confidence 689998765 6666766 4455653221 233333 444566789999999766554 344 4
Q ss_pred EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC---CcEEEEEcCCC
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD---GDVKLWQIKLE 136 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---~~v~~wd~~~~ 136 (138)
|.++++..+. ...+. .....+....|+|+ ++.++....+ ..|.+||+.++
T Consensus 316 Iy~~d~~g~~----------~~~lt-~~~~~~~~~~~Spd-G~~ia~~~~~~~~~~i~~~d~~~~ 368 (435)
T PRK05137 316 LYVMNADGSN----------PRRIS-FGGGRYSTPVWSPR-GDLIAFTKQGGGQFSIGVMKPDGS 368 (435)
T ss_pred EEEEECCCCC----------eEEee-cCCCcccCeEECCC-CCEEEEEEcCCCceEEEEEECCCC
Confidence 7777765443 22222 22344566889999 8888766543 35777776543
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=98.64 E-value=8.1e-08 Score=66.00 Aligned_cols=107 Identities=21% Similarity=0.331 Sum_probs=83.1
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
...+|+++.|-.+..||++.+.. ++..... .......|+|+--.+.+.+.+....|.+||.+.+.
T Consensus 127 pdVlatcsvdt~vh~wd~rSp~~--------------p~ys~~~-w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs 191 (1081)
T KOG0309|consen 127 PDVLATCSVDTYVHAWDMRSPHR--------------PFYSTSS-WRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGS 191 (1081)
T ss_pred CcceeeccccccceeeeccCCCc--------------ceeeeec-ccccCceeeecccCcchhhhccCCceEEEeccCCC
Confidence 35799999999999999977654 3454444 45566789999877766666777789999999877
Q ss_pred CCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 85 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
.+....++|...|+.+.|+.-....+.+.+.|++|++||...
T Consensus 192 ---------~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~k 233 (1081)
T KOG0309|consen 192 ---------TPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSK 233 (1081)
T ss_pred ---------cceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccc
Confidence 344555678889999988765456788999999999999753
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=98.63 E-value=6.7e-06 Score=53.78 Aligned_cols=112 Identities=13% Similarity=0.113 Sum_probs=66.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee-CCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~-~d~~i~i~~ 79 (138)
|+|||+++.+++.|+.|.++|+... +.+.++.. .....+++++++|+++++++ ..+.+.++|
T Consensus 44 ~s~Dgr~~yv~~rdg~vsviD~~~~---------------~~v~~i~~--G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D 106 (369)
T PF02239_consen 44 FSPDGRYLYVANRDGTVSVIDLATG---------------KVVATIKV--GGNPRGIAVSPDGKYVYVANYEPGTVSVID 106 (369)
T ss_dssp -TT-SSEEEEEETTSEEEEEETTSS---------------SEEEEEE---SSEEEEEEE--TTTEEEEEEEETTEEEEEE
T ss_pred ecCCCCEEEEEcCCCeEEEEECCcc---------------cEEEEEec--CCCcceEEEcCCCCEEEEEecCCCceeEec
Confidence 5899999999999999999997554 34666655 34568899999999777665 678999999
Q ss_pred ccCCCCCCceeeeeeeeeee--cccccceeEEEEccCCCC-EEEEEeCCCcEEEEEcCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEH--RAHNQDVNCVAWNPVVPG-MLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~-~l~~~~~d~~v~~wd~~~ 135 (138)
....+ .......... ......+..+-.+|. .. ++++.-.-+.|.+-|...
T Consensus 107 ~~tle-----~v~~I~~~~~~~~~~~~Rv~aIv~s~~-~~~fVv~lkd~~~I~vVdy~d 159 (369)
T PF02239_consen 107 AETLE-----PVKTIPTGGMPVDGPESRVAAIVASPG-RPEFVVNLKDTGEIWVVDYSD 159 (369)
T ss_dssp TTT-------EEEEEE--EE-TTTS---EEEEEE-SS-SSEEEEEETTTTEEEEEETTT
T ss_pred ccccc-----ceeecccccccccccCCCceeEEecCC-CCEEEEEEccCCeEEEEEecc
Confidence 88765 0000000000 012345667777777 55 444444446676666543
|
... |
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.8e-07 Score=69.67 Aligned_cols=112 Identities=12% Similarity=0.275 Sum_probs=77.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCC-----C-----------------ccCCCCC--------CceEEeEEecCCC
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSA-----G-----------------IPTPDND--------SVWKCVCTLSGHH 50 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~-----~-----------------~~~~~~~--------~~~~~~~~~~~~~ 50 (138)
|+.+|+.+..+..||.+.+|......-.. + .+...+. ....++. .. |
T Consensus 2259 f~~qGnk~~i~d~dg~l~l~q~~pk~~~s~qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~-H 2335 (2439)
T KOG1064|consen 2259 FNHQGNKFGIVDGDGDLSLWQASPKPYTSWQCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVH--TC-H 2335 (2439)
T ss_pred hcccCCceeeeccCCceeecccCCcceeccccCCccccceeeeehhhhccccCCCCCcccchhcccCcccceee--ee-c
Confidence 56788888888899999999864221100 0 0000110 1112222 34 8
Q ss_pred ccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEE
Q psy14817 51 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKL 130 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~ 130 (138)
.+.++++++.|..+.|++|+.+|.|++||++..+ . .|.-+. +. . ..++++++..|.++|
T Consensus 2336 ~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrq----------l-----~h~~~~----~~-~-~~~f~~~ss~g~ikI 2394 (2439)
T KOG1064|consen 2336 DGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQ----------L-----RHTFQA----LD-T-REYFVTGSSEGNIKI 2394 (2439)
T ss_pred CCCceEEEEcCcceEEEecCCcCcEEEeehHHHH----------H-----HHHhhh----hh-h-hheeeccCcccceEE
Confidence 8899999999999999999999999999998654 2 222222 33 3 789999999999999
Q ss_pred EEcCCC
Q psy14817 131 WQIKLE 136 (138)
Q Consensus 131 wd~~~~ 136 (138)
|++..-
T Consensus 2395 w~~s~~ 2400 (2439)
T KOG1064|consen 2395 WRLSEF 2400 (2439)
T ss_pred EEcccc
Confidence 998754
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.7e-05 Score=48.98 Aligned_cols=34 Identities=21% Similarity=0.365 Sum_probs=30.5
Q ss_pred cccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 102 HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 102 ~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
....|..|..+|+ +..|++...+|.|.+|++..-
T Consensus 228 ~~d~i~kmSlSPd-g~~La~ih~sG~lsLW~iPsL 261 (282)
T PF15492_consen 228 EQDGIFKMSLSPD-GSLLACIHFSGSLSLWEIPSL 261 (282)
T ss_pred CCCceEEEEECCC-CCEEEEEEcCCeEEEEecCcc
Confidence 4678999999999 999999999999999998653
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.6e-06 Score=60.05 Aligned_cols=104 Identities=18% Similarity=0.262 Sum_probs=74.1
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC-----CCeEEEeeCCCcEEEE
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL-----TDLIATACGDDAIRIF 78 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~-----~~~~~s~~~d~~i~i~ 78 (138)
+|.+++|||.||.|.|-.+.+... .+...+ +.++.+|+++|+ .+.+++|+..| +.++
T Consensus 82 ~Gey~asCS~DGkv~I~sl~~~~~-------------~~~~df----~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~ 143 (846)
T KOG2066|consen 82 EGEYVASCSDDGKVVIGSLFTDDE-------------ITQYDF----KRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLS 143 (846)
T ss_pred CCceEEEecCCCcEEEeeccCCcc-------------ceeEec----CCcceeEEeccchhhhhhhheeecCcce-EEEe
Confidence 689999999999999998765543 222332 458899999998 24899999888 7776
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.-+-.. + . .........++|.++.|. +++++=++.+| |+++|...++
T Consensus 144 er~wlg---n---k--~~v~l~~~eG~I~~i~W~---g~lIAWand~G-v~vyd~~~~~ 190 (846)
T KOG2066|consen 144 ERNWLG---N---K--DSVVLSEGEGPIHSIKWR---GNLIAWANDDG-VKVYDTPTRQ 190 (846)
T ss_pred hhhhhc---C---c--cceeeecCccceEEEEec---CcEEEEecCCC-cEEEeccccc
Confidence 544222 0 0 011234567899999994 67888888777 9999987654
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.58 E-value=4.9e-07 Score=55.11 Aligned_cols=64 Identities=16% Similarity=0.287 Sum_probs=52.6
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEeccC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENP 82 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~ 82 (138)
+.+.+++|++||.+.+||.+.-. .+...+.. |+..++.+.|+|..+ .|++++.||.+..||...
T Consensus 191 qq~~v~cgt~dg~~~l~d~rn~~--------------~p~S~l~a-hk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 191 QQHLVCCGTDDGIVGLWDARNVA--------------MPVSLLKA-HKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred cccEEEEecCCCeEEEEEccccc--------------chHHHHHH-hhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 45678899999999999986542 22445555 899999999999776 999999999999999874
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.3e-06 Score=57.00 Aligned_cols=104 Identities=13% Similarity=0.203 Sum_probs=68.7
Q ss_pred CccCCCeEEEe--eCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCC---CcE
Q psy14817 1 MIQTGSRLATC--SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD---DAI 75 (138)
Q Consensus 1 ~s~~~~~l~t~--s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d---~~i 75 (138)
|+|+++-|+.+ -.-..+.|||++. .++..+ ..++-+++.|+|.|.+++.++.+ |.+
T Consensus 278 W~~s~~EF~VvyGfMPAkvtifnlr~----------------~~v~df---~egpRN~~~fnp~g~ii~lAGFGNL~G~m 338 (566)
T KOG2315|consen 278 WSPSGREFAVVYGFMPAKVTIFNLRG----------------KPVFDF---PEGPRNTAFFNPHGNIILLAGFGNLPGDM 338 (566)
T ss_pred ECCCCCEEEEEEecccceEEEEcCCC----------------CEeEeC---CCCCccceEECCCCCEEEEeecCCCCCce
Confidence 45666554443 2344566666532 223333 35678899999999977776544 689
Q ss_pred EEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC------CCcEEEEEcCCC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD------DGDVKLWQIKLE 136 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~------d~~v~~wd~~~~ 136 (138)
-+||..... ..... .....+-..|+|+ +++++++.. |..++||++...
T Consensus 339 EvwDv~n~K----------~i~~~--~a~~tt~~eW~Pd-Ge~flTATTaPRlrvdNg~KiwhytG~ 392 (566)
T KOG2315|consen 339 EVWDVPNRK----------LIAKF--KAANTTVFEWSPD-GEYFLTATTAPRLRVDNGIKIWHYTGS 392 (566)
T ss_pred EEEeccchh----------hcccc--ccCCceEEEEcCC-CcEEEEEeccccEEecCCeEEEEecCc
Confidence 999998754 22211 2234456799999 999988864 788999997654
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.2e-07 Score=60.85 Aligned_cols=118 Identities=20% Similarity=0.322 Sum_probs=78.6
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEE-ecCCCcc--CeEEEE-EecCCCeEEEeeCCCcEEE
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT-LSGHHGR--TIYDIS-WCHLTDLIATACGDDAIRI 77 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~v~~v~-~~~~~~~~~s~~~d~~i~i 77 (138)
+.++.-|.+.-.|..|.+|+......+.+.+..... ..+.. +++ |.. .|.++- |.|...++++|++.|.|.|
T Consensus 345 sh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~---~~~k~vYKG-HrN~~TVKgVNFfGPrsEyVvSGSDCGhIFi 420 (559)
T KOG1334|consen 345 SHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPRE---QYVKRVYKG-HRNSRTVKGVNFFGPRSEYVVSGSDCGHIFI 420 (559)
T ss_pred cCCccceeeeecccceEEeccccccCCCCCCCcchh---hccchhhcc-cccccccceeeeccCccceEEecCccceEEE
Confidence 444444444556788888854333332222221111 11222 455 543 455553 5677789999999999999
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
|+-..++ +.....+....|+||.=+|. -.+|++.+-|..|+||...
T Consensus 421 W~K~t~e----------ii~~MegDr~VVNCLEpHP~-~PvLAsSGid~DVKIWTP~ 466 (559)
T KOG1334|consen 421 WDKKTGE----------IIRFMEGDRHVVNCLEPHPH-LPVLASSGIDHDVKIWTPL 466 (559)
T ss_pred EecchhH----------HHHHhhcccceEeccCCCCC-CchhhccCCccceeeecCC
Confidence 9988776 55555566668999988888 8899999999999999763
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.8e-06 Score=56.75 Aligned_cols=105 Identities=12% Similarity=0.205 Sum_probs=78.5
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
+.+-..|-+++.|+.+..|+.... +.+..+.. -+..+.+++.+||+..+++++ +.|++|++.
T Consensus 111 ~~~~~ciyS~~ad~~v~~~~~~~~---------------~~~~~~~~-~~~~~~sl~is~D~~~l~~as--~~ik~~~~~ 172 (541)
T KOG4547|consen 111 AQRLGCIYSVGADLKVVYILEKEK---------------VIIRIWKE-QKPLVSSLCISPDGKILLTAS--RQIKVLDIE 172 (541)
T ss_pred ccccCceEecCCceeEEEEecccc---------------eeeeeecc-CCCccceEEEcCCCCEEEecc--ceEEEEEcc
Confidence 345567899999999999996432 33455555 467889999999999999886 479999999
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccC----CCCE-EEEEeCCCcEEEEEcC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV----VPGM-LASCSDDGDVKLWQIK 134 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~-l~~~~~d~~v~~wd~~ 134 (138)
..+ ....+.+|.++|+++.|-.. .+.+ |.+...+.-+.+|-.+
T Consensus 173 ~ke----------vv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~ 220 (541)
T KOG4547|consen 173 TKE----------VVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVE 220 (541)
T ss_pred Cce----------EEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEE
Confidence 887 56666799999999998643 2344 4455566778888554
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=3.8e-06 Score=55.98 Aligned_cols=77 Identities=16% Similarity=0.201 Sum_probs=45.8
Q ss_pred CeEEEEEecCCCeEEEee-CCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC---CcE
Q psy14817 53 TIYDISWCHLTDLIATAC-GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD---GDV 128 (138)
Q Consensus 53 ~v~~v~~~~~~~~~~s~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---~~v 128 (138)
......|+|+|..|+..+ .++...+|.+...... . ...........+....|+|+ ++.|+..+.+ ..|
T Consensus 282 ~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g-~------~~~~lt~~~~~~~~p~wSPD-G~~Laf~~~~~g~~~I 353 (428)
T PRK01029 282 TQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEG-Q------SPRLLTKKYRNSSCPAWSPD-GKKIAFCSVIKGVRQI 353 (428)
T ss_pred CcCCeEECCCCCEEEEEECCCCCceEEEEECcccc-c------ceEEeccCCCCccceeECCC-CCEEEEEEcCCCCcEE
Confidence 345679999999665544 5666566644321100 0 01111223345677899999 8877766543 468
Q ss_pred EEEEcCCCC
Q psy14817 129 KLWQIKLEN 137 (138)
Q Consensus 129 ~~wd~~~~~ 137 (138)
.+||+.+++
T Consensus 354 ~v~dl~~g~ 362 (428)
T PRK01029 354 CVYDLATGR 362 (428)
T ss_pred EEEECCCCC
Confidence 899987664
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=98.56 E-value=7.3e-06 Score=54.18 Aligned_cols=82 Identities=10% Similarity=0.103 Sum_probs=64.1
Q ss_pred EEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe
Q psy14817 44 CTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 123 (138)
Q Consensus 44 ~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 123 (138)
..+.. .-+.|.++..+++|++++.+.....+.+.|+..+. .....+...+-|+...|+|+ +++++.+-
T Consensus 395 kr~e~-~lg~I~av~vs~dGK~~vvaNdr~el~vididngn----------v~~idkS~~~lItdf~~~~n-sr~iAYaf 462 (668)
T COG4946 395 KRIEK-DLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGN----------VRLIDKSEYGLITDFDWHPN-SRWIAYAF 462 (668)
T ss_pred EEeeC-CccceEEEEEcCCCcEEEEEcCceEEEEEEecCCC----------eeEecccccceeEEEEEcCC-ceeEEEec
Confidence 34444 56789999999999999999888888898999887 44444455678999999999 99998775
Q ss_pred CC----CcEEEEEcCCCC
Q psy14817 124 DD----GDVKLWQIKLEN 137 (138)
Q Consensus 124 ~d----~~v~~wd~~~~~ 137 (138)
-+ ..|+++|+.+++
T Consensus 463 P~gy~tq~Iklydm~~~K 480 (668)
T COG4946 463 PEGYYTQSIKLYDMDGGK 480 (668)
T ss_pred CcceeeeeEEEEecCCCe
Confidence 43 468899887754
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.9e-07 Score=58.06 Aligned_cols=83 Identities=17% Similarity=0.296 Sum_probs=66.9
Q ss_pred eEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEE
Q psy14817 43 VCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLAS 121 (138)
Q Consensus 43 ~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 121 (138)
..-+.. +...|..++|+|... ++..++.+.+|+|.|++... .......+ ..+++++|.-++.+++..
T Consensus 186 sq~lp~-~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~----------~vssy~a~-~~~wSC~wDlde~h~IYa 253 (463)
T KOG1645|consen 186 SQILPG-EGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSC----------VVSSYIAY-NQIWSCCWDLDERHVIYA 253 (463)
T ss_pred hhcccc-cchhhhhhccCccccceeeeeccCceEEEEecccce----------eeeheecc-CCceeeeeccCCcceeEE
Confidence 333444 677899999999988 78889999999999999765 33333334 799999999887788888
Q ss_pred EeCCCcEEEEEcCCCC
Q psy14817 122 CSDDGDVKLWQIKLEN 137 (138)
Q Consensus 122 ~~~d~~v~~wd~~~~~ 137 (138)
|-..|.|.+||+|..+
T Consensus 254 Gl~nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 254 GLQNGMVLVYDMRQPE 269 (463)
T ss_pred eccCceEEEEEccCCC
Confidence 8899999999999764
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=98.50 E-value=4.9e-06 Score=52.56 Aligned_cols=90 Identities=21% Similarity=0.322 Sum_probs=64.5
Q ss_pred eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEeccCCCC
Q psy14817 7 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPEAG 85 (138)
Q Consensus 7 ~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~ 85 (138)
.|.....|+.|.+|++..+. | ...+.. ....+..++|+|+|+ .+.+...+-.|.+|.+....
T Consensus 63 ilC~~yk~~~vqvwsl~Qpe-------------w--~ckIde-g~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~- 125 (447)
T KOG4497|consen 63 ILCVAYKDPKVQVWSLVQPE-------------W--YCKIDE-GQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQK- 125 (447)
T ss_pred eeeeeeccceEEEEEeecce-------------e--EEEecc-CCCcceeeeECCCcceEeeeecceeEEEEEEeccce-
Confidence 45566788999999985432 2 334455 577899999999997 66667778899999998755
Q ss_pred CCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC
Q psy14817 86 DSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124 (138)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 124 (138)
.... ......+..++|+|+ +++.+.++.
T Consensus 126 ---------~~~~-~~pK~~~kg~~f~~d-g~f~ai~sR 153 (447)
T KOG4497|consen 126 ---------GYLL-PHPKTNVKGYAFHPD-GQFCAILSR 153 (447)
T ss_pred ---------eEEe-cccccCceeEEECCC-Cceeeeeec
Confidence 2222 223345688899999 888877653
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.9e-05 Score=52.68 Aligned_cols=108 Identities=13% Similarity=0.056 Sum_probs=61.9
Q ss_pred CccCCCeEE-EeeCCC--cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee-CCCc--
Q psy14817 1 MIQTGSRLA-TCSDDA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDA-- 74 (138)
Q Consensus 1 ~s~~~~~l~-t~s~d~--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~-~d~~-- 74 (138)
|||+|+.|+ +.+.++ .|.++|+.... ...+.. +........|+|++..++..+ .++.
T Consensus 250 ~SpDG~~la~~~~~~g~~~Iy~~d~~~~~----------------~~~lt~-~~~~~~~~~~spDg~~i~f~s~~~g~~~ 312 (430)
T PRK00178 250 WSPDGSKLAFVLSKDGNPEIYVMDLASRQ----------------LSRVTN-HPAIDTEPFWGKDGRTLYFTSDRGGKPQ 312 (430)
T ss_pred ECCCCCEEEEEEccCCCceEEEEECCCCC----------------eEEccc-CCCCcCCeEECCCCCEEEEEECCCCCce
Confidence 689998877 555565 46666754321 122333 344456678999998654443 4444
Q ss_pred EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-CC--cEEEEEcCCCC
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-DG--DVKLWQIKLEN 137 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~--~v~~wd~~~~~ 137 (138)
|.++++..+. ..... ..........|+|+ ++.++..+. ++ .|.++|+.+++
T Consensus 313 iy~~d~~~g~----------~~~lt-~~~~~~~~~~~Spd-g~~i~~~~~~~~~~~l~~~dl~tg~ 366 (430)
T PRK00178 313 IYKVNVNGGR----------AERVT-FVGNYNARPRLSAD-GKTLVMVHRQDGNFHVAAQDLQRGS 366 (430)
T ss_pred EEEEECCCCC----------EEEee-cCCCCccceEECCC-CCEEEEEEccCCceEEEEEECCCCC
Confidence 5556665443 11111 11122345689999 887766654 33 47788887653
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.4e-05 Score=49.19 Aligned_cols=75 Identities=5% Similarity=0.037 Sum_probs=57.0
Q ss_pred eEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 54 IYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 54 v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
+.++++++++.+.++.++...|..|.++... ++.... . ....+..-.+..|+.. ...++++..||.+.|||+
T Consensus 161 ~ns~~~snd~~~~~~Vgds~~Vf~y~id~~s----ey~~~~--~-~a~t~D~gF~~S~s~~-~~~FAv~~Qdg~~~I~DV 232 (344)
T KOG4532|consen 161 QNSLHYSNDPSWGSSVGDSRRVFRYAIDDES----EYIENI--Y-EAPTSDHGFYNSFSEN-DLQFAVVFQDGTCAIYDV 232 (344)
T ss_pred eeeeEEcCCCceEEEecCCCcceEEEeCCcc----ceeeee--E-ecccCCCceeeeeccC-cceEEEEecCCcEEEEEe
Confidence 7889999999999999999999999988654 111111 1 1123344466788887 889999999999999999
Q ss_pred CCC
Q psy14817 134 KLE 136 (138)
Q Consensus 134 ~~~ 136 (138)
|..
T Consensus 233 R~~ 235 (344)
T KOG4532|consen 233 RNM 235 (344)
T ss_pred ccc
Confidence 864
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.3e-06 Score=37.09 Aligned_cols=38 Identities=21% Similarity=0.423 Sum_probs=32.4
Q ss_pred EEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 41 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 41 ~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
+++..+.. |...+.++.|++.+..+++++.|+.+++|+
T Consensus 3 ~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKG-HTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEe-cCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 44556666 788999999999999999999999999995
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.45 E-value=6.1e-07 Score=56.71 Aligned_cols=79 Identities=11% Similarity=0.273 Sum_probs=62.0
Q ss_pred ccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEE
Q psy14817 51 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKL 130 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~ 130 (138)
+..|.++.|...++++..|+++|.|...|++... ..+. + ...+ ..|...|+++.....+.+.|++.+.+|+|++
T Consensus 252 ksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rn-qG~~--~-~a~r--lyh~Ssvtslq~Lq~s~q~LmaS~M~gkikL 325 (425)
T KOG2695|consen 252 KSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRN-QGNG--W-CAQR--LYHDSSVTSLQILQFSQQKLMASDMTGKIKL 325 (425)
T ss_pred chhHHHHHhcccCCeeEecccCCcEEEEEeeecc-cCCC--c-ceEE--EEcCcchhhhhhhccccceEeeccCcCceeE
Confidence 5678888999889999999999999999999753 1111 1 1111 2688899999887734889999999999999
Q ss_pred EEcCC
Q psy14817 131 WQIKL 135 (138)
Q Consensus 131 wd~~~ 135 (138)
||+|.
T Consensus 326 yD~R~ 330 (425)
T KOG2695|consen 326 YDLRA 330 (425)
T ss_pred eeehh
Confidence 99985
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=98.44 E-value=2e-06 Score=58.19 Aligned_cols=67 Identities=18% Similarity=0.295 Sum_probs=58.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeE-EEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIY-DISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|.-.+||++..+|.|.+..+. |+.+.++.- +...++ +++|.|||+.++.|-.||+|++.|
T Consensus 28 wnP~~dLiA~~t~~gelli~R~n----------------~qRlwtip~-p~~~v~~sL~W~~DGkllaVg~kdG~I~L~D 90 (665)
T KOG4640|consen 28 WNPKMDLIATRTEKGELLIHRLN----------------WQRLWTIPI-PGENVTASLCWRPDGKLLAVGFKDGTIRLHD 90 (665)
T ss_pred EcCccchhheeccCCcEEEEEec----------------cceeEeccC-CCCccceeeeecCCCCEEEEEecCCeEEEEE
Confidence 57888899999999999999852 566888886 566666 999999999999999999999999
Q ss_pred ccCCC
Q psy14817 80 ENPEA 84 (138)
Q Consensus 80 ~~~~~ 84 (138)
+..+.
T Consensus 91 ve~~~ 95 (665)
T KOG4640|consen 91 VEKGG 95 (665)
T ss_pred ccCCC
Confidence 99876
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.43 E-value=2.1e-05 Score=57.83 Aligned_cols=124 Identities=6% Similarity=0.042 Sum_probs=76.9
Q ss_pred CccCCC-eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEec---C----CCccCeEEEEEecCCCeEEEeeCC
Q psy14817 1 MIQTGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS---G----HHGRTIYDISWCHLTDLIATACGD 72 (138)
Q Consensus 1 ~s~~~~-~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~v~~v~~~~~~~~~~s~~~d 72 (138)
|+|+++ ++++-+.++.|++||+......... .+..........+- + .......+++++++|.++++-..+
T Consensus 747 vspdG~~LYVADs~n~~Irv~D~~tg~~~~~~--gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N 824 (1057)
T PLN02919 747 LSPDLKELYIADSESSSIRALDLKTGGSRLLA--GGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYN 824 (1057)
T ss_pred EeCCCCEEEEEECCCCeEEEEECCCCcEEEEE--ecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCC
Confidence 467777 6667777899999997543210000 00000000000000 0 011234688999999988888889
Q ss_pred CcEEEEeccCCCCCCceeeeeeeeee-------------ecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 73 DAIRIFKENPEAGDSDMVSFDLVHTE-------------HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 73 ~~i~i~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.|++||...+. .... ..+.-.....++++++ ++++++-+.++.|++||+++++
T Consensus 825 ~rIrviD~~tg~----------v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~d-G~lyVaDt~Nn~Irvid~~~~~ 891 (1057)
T PLN02919 825 HKIKKLDPATKR----------VTTLAGTGKAGFKDGKALKAQLSEPAGLALGEN-GRLFVADTNNSLIRYLDLNKGE 891 (1057)
T ss_pred CEEEEEECCCCe----------EEEEeccCCcCCCCCcccccccCCceEEEEeCC-CCEEEEECCCCEEEEEECCCCc
Confidence 999999987553 1110 0112235778999998 8888888899999999998764
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=98.35 E-value=5.8e-06 Score=56.67 Aligned_cols=114 Identities=18% Similarity=0.174 Sum_probs=79.8
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
..++.+++-|+.-|.+.+|+....... .....+ ..+.+..+..+++..+.+.|+..|.|.++.+.
T Consensus 42 dst~~~l~~GsS~G~lyl~~R~~~~~~--------------~~~~~~-~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~ 106 (726)
T KOG3621|consen 42 DATEEYLAMGSSAGSVYLYNRHTGEMR--------------KLKNEG-ATGITCVRSVSSVEYLVAAGTASGRVSVFQLN 106 (726)
T ss_pred ecCCceEEEecccceEEEEecCchhhh--------------cccccC-ccceEEEEEecchhHhhhhhcCCceEEeehhh
Confidence 346789999999999999995433210 112222 23445566778888899999999999999888
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
... +...... ......|...|++++|+++ +..+++|...|+|..-.+..
T Consensus 107 ~~~-p~~~~~~---t~~d~~~~~rVTal~Ws~~-~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 107 KEL-PRDLDYV---TPCDKSHKCRVTALEWSKN-GMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred ccC-CCcceee---ccccccCCceEEEEEeccc-ccEEeecCCCceEEEEEech
Confidence 743 2221111 1122347889999999999 99999999999998776554
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=4.7e-05 Score=51.19 Aligned_cols=108 Identities=11% Similarity=0.075 Sum_probs=59.6
Q ss_pred CccCCCeEE-EeeCCCc--EEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEe-eCCCc--
Q psy14817 1 MIQTGSRLA-TCSDDAT--VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA-CGDDA-- 74 (138)
Q Consensus 1 ~s~~~~~l~-t~s~d~~--v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~-~~d~~-- 74 (138)
|||+|+.|+ +.+.++. |.++|+.... ...+.. +........|+|++..++.. ..++.
T Consensus 269 wSPDG~~La~~~~~~g~~~Iy~~dl~tg~----------------~~~lt~-~~~~~~~p~wSpDG~~I~f~s~~~g~~~ 331 (448)
T PRK04792 269 FSPDGKKLALVLSKDGQPEIYVVDIATKA----------------LTRITR-HRAIDTEPSWHPDGKSLIFTSERGGKPQ 331 (448)
T ss_pred ECCCCCEEEEEEeCCCCeEEEEEECCCCC----------------eEECcc-CCCCccceEECCCCCEEEEEECCCCCce
Confidence 689999776 4566776 5555543221 223333 33455678999999965544 34454
Q ss_pred EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-CCc--EEEEEcCCCC
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-DGD--VKLWQIKLEN 137 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~--v~~wd~~~~~ 137 (138)
|.++++..+. ..... ..........|+|+ ++.++..+. ++. |.++|+.+++
T Consensus 332 Iy~~dl~~g~----------~~~Lt-~~g~~~~~~~~SpD-G~~l~~~~~~~g~~~I~~~dl~~g~ 385 (448)
T PRK04792 332 IYRVNLASGK----------VSRLT-FEGEQNLGGSITPD-GRSMIMVNRTNGKFNIARQDLETGA 385 (448)
T ss_pred EEEEECCCCC----------EEEEe-cCCCCCcCeeECCC-CCEEEEEEecCCceEEEEEECCCCC
Confidence 4445554443 11111 11122345689999 877766544 443 4456766553
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.29 E-value=4.1e-06 Score=52.60 Aligned_cols=85 Identities=16% Similarity=0.257 Sum_probs=61.2
Q ss_pred CccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEE
Q psy14817 50 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 129 (138)
Q Consensus 50 ~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~ 129 (138)
|.-.+.++.++.+.+.++++ .|-.|.+|.+....+ ..............-...|++..|+|.....+...+..|.|+
T Consensus 171 H~yhiNSiS~NsD~et~lSa-DdLrINLWnl~i~D~--sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ik 247 (460)
T COG5170 171 HPYHINSISFNSDKETLLSA-DDLRINLWNLEIIDG--SFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIK 247 (460)
T ss_pred ceeEeeeeeecCchheeeec-cceeeeeccccccCC--ceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEE
Confidence 77789999999999888876 566799998875431 111111111111123457889999998788899999999999
Q ss_pred EEEcCCCC
Q psy14817 130 LWQIKLEN 137 (138)
Q Consensus 130 ~wd~~~~~ 137 (138)
+-|+|+..
T Consensus 248 l~DlRq~a 255 (460)
T COG5170 248 LNDLRQSA 255 (460)
T ss_pred ehhhhhhh
Confidence 99999654
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=98.23 E-value=0.00039 Score=45.30 Aligned_cols=120 Identities=9% Similarity=0.125 Sum_probs=69.4
Q ss_pred CccCCCeEEEee-CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEE-eeCCCcEEEE
Q psy14817 1 MIQTGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT-ACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s-~~~d~~i~i~ 78 (138)
|+|+|+++++.. ....|.+|++..... .......+..........+.|+|+++++.. .-.++.|.++
T Consensus 151 ~~pdg~~v~v~dlG~D~v~~~~~~~~~~-----------~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~ 219 (345)
T PF10282_consen 151 FSPDGRFVYVPDLGADRVYVYDIDDDTG-----------KLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVF 219 (345)
T ss_dssp E-TTSSEEEEEETTTTEEEEEEE-TTS------------TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEEecCCCEEEEEEEeCCCc-----------eEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEE
Confidence 578998776653 345888888754321 122233333324566789999999996544 4467789999
Q ss_pred eccCCCCCCceeeeeeeeeeec--ccccceeEEEEccCCCCEEEEEe-CCCcEEEEEcC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHR--AHNQDVNCVAWNPVVPGMLASCS-DDGDVKLWQIK 134 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~-~d~~v~~wd~~ 134 (138)
++....+ ............. ........+.++|+ +++|..+. .+..|.+|++.
T Consensus 220 ~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~i~ispd-g~~lyvsnr~~~sI~vf~~d 275 (345)
T PF10282_consen 220 DYDPSDG--SLTEIQTISTLPEGFTGENAPAEIAISPD-GRFLYVSNRGSNSISVFDLD 275 (345)
T ss_dssp EEETTTT--EEEEEEEEESCETTSCSSSSEEEEEE-TT-SSEEEEEECTTTEEEEEEEC
T ss_pred eecccCC--ceeEEEEeeeccccccccCCceeEEEecC-CCEEEEEeccCCEEEEEEEe
Confidence 9884331 1111111111111 11236788999999 88776655 57789999984
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=98.22 E-value=2e-06 Score=57.84 Aligned_cols=88 Identities=20% Similarity=0.387 Sum_probs=63.4
Q ss_pred EeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEE
Q psy14817 42 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLAS 121 (138)
Q Consensus 42 ~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 121 (138)
.+..+.+ |+..|..+.--.+..-+++++.|.++++|.++... +......+.-....|+.+|.++.|..+ .+.+++
T Consensus 727 rL~nf~G-H~~~iRai~AidNENSFiSASkDKTVKLWSik~Eg---D~~~tsaCQfTY~aHkk~i~~igfL~~-lr~i~S 801 (1034)
T KOG4190|consen 727 RLCNFTG-HQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEG---DEIGTSACQFTYQAHKKPIHDIGFLAD-LRSIAS 801 (1034)
T ss_pred eeecccC-cHHHhHHHHhcccccceeeccCCceEEEEEecccc---CccccceeeeEhhhccCcccceeeeec-cceeee
Confidence 3456777 88888887765566789999999999999998654 222212222234579999999999887 666654
Q ss_pred EeCCCcEEEEEcCCC
Q psy14817 122 CSDDGDVKLWQIKLE 136 (138)
Q Consensus 122 ~~~d~~v~~wd~~~~ 136 (138)
.|+-|.+||.-.+
T Consensus 802 --cD~giHlWDPFig 814 (1034)
T KOG4190|consen 802 --CDGGIHLWDPFIG 814 (1034)
T ss_pred --ccCcceeeccccc
Confidence 4889999996443
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=98.20 E-value=7e-06 Score=34.67 Aligned_cols=32 Identities=47% Similarity=0.800 Sum_probs=28.7
Q ss_pred cccccceeEEEEccCCCCEEEEEeCCCcEEEEE
Q psy14817 100 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 100 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd 132 (138)
..|...|.++.|.+. ...+++++.|+.+++|+
T Consensus 9 ~~~~~~i~~~~~~~~-~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 9 KGHTGPVTSVAFSPD-GKYLASASDDGTIKLWD 40 (40)
T ss_pred EecCCceeEEEECCC-CCEEEEecCCCeEEEcC
Confidence 367789999999998 79999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.15 E-value=3.7e-05 Score=54.59 Aligned_cols=111 Identities=17% Similarity=0.230 Sum_probs=77.4
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC---------CC
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG---------DD 73 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~---------d~ 73 (138)
.+++++.+|...|+|.+-|... .+.++++.. |.+.|..+.. .|..+++++. |.
T Consensus 185 ~Nnr~lf~G~t~G~V~LrD~~s---------------~~~iht~~a-Hs~siSDfDv--~GNlLitCG~S~R~~~l~~D~ 246 (1118)
T KOG1275|consen 185 YNNRNLFCGDTRGTVFLRDPNS---------------FETIHTFDA-HSGSISDFDV--QGNLLITCGYSMRRYNLAMDP 246 (1118)
T ss_pred ecCcEEEeecccceEEeecCCc---------------Cceeeeeec-cccceeeeec--cCCeEEEeecccccccccccc
Confidence 3678899999999999999543 355888988 8998887755 5787777654 45
Q ss_pred cEEEEeccCCCCCC--------c-----------------eeeeeee-----------eeeecccccceeEEEEccCCCC
Q psy14817 74 AIRIFKENPEAGDS--------D-----------------MVSFDLV-----------HTEHRAHNQDVNCVAWNPVVPG 117 (138)
Q Consensus 74 ~i~i~~~~~~~~~~--------~-----------------~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~ 117 (138)
.|+|||++....-. . ...+.+. ..........+.+++++++ ++
T Consensus 247 FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn-~~ 325 (1118)
T KOG1275|consen 247 FVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSN-GD 325 (1118)
T ss_pred hhhhhhhhhhhccCCcccccCchhhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCC-Cc
Confidence 78999999664000 0 0000000 0011122345888999999 99
Q ss_pred EEEEEeCCCcEEEEE
Q psy14817 118 MLASCSDDGDVKLWQ 132 (138)
Q Consensus 118 ~l~~~~~d~~v~~wd 132 (138)
.++.+..+|.|.+|.
T Consensus 326 alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 326 ALAFGDHEGHVNLWA 340 (1118)
T ss_pred eEEEecccCcEeeec
Confidence 999999999999996
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=98.14 E-value=8e-06 Score=57.63 Aligned_cols=105 Identities=16% Similarity=0.258 Sum_probs=79.4
Q ss_pred CccCCCeEEEee----CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEE
Q psy14817 1 MIQTGSRLATCS----DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIR 76 (138)
Q Consensus 1 ~s~~~~~l~t~s----~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~ 76 (138)
|+|...+||.++ ..|+|.||--...+. .... ..-.+++++|+|..-.++.|-.-|.+.
T Consensus 23 WHPsePlfAVA~fS~er~GSVtIfadtGEPq----------------r~Vt--~P~hatSLCWHpe~~vLa~gwe~g~~~ 84 (1416)
T KOG3617|consen 23 WHPSEPLFAVASFSPERGGSVTIFADTGEPQ----------------RDVT--YPVHATSLCWHPEEFVLAQGWEMGVSD 84 (1416)
T ss_pred cCCCCceeEEEEecCCCCceEEEEecCCCCC----------------cccc--cceehhhhccChHHHHHhhccccceeE
Confidence 678888888776 467788776322211 1111 122356799999988999999999999
Q ss_pred EEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 77 IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
+|.....+ .......|..+|..+.|+++ +..++++..-|.|.+|.+.
T Consensus 85 v~~~~~~e----------~htv~~th~a~i~~l~wS~~-G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 85 VQKTNTTE----------THTVVETHPAPIQGLDWSHD-GTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred EEecCCce----------eeeeccCCCCCceeEEecCC-CCeEEEcCCCceeEEEEee
Confidence 99887655 44455579999999999999 9999999999999999764
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.00057 Score=44.56 Aligned_cols=116 Identities=17% Similarity=0.223 Sum_probs=69.9
Q ss_pred CccCCCeEE-EeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC---CC--ccCeEEEEEecCCCeEEEee-CCC
Q psy14817 1 MIQTGSRLA-TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG---HH--GRTIYDISWCHLTDLIATAC-GDD 73 (138)
Q Consensus 1 ~s~~~~~l~-t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~v~~v~~~~~~~~~~s~~-~d~ 73 (138)
|+|+++++. +.-.++.|.++++..... ..+.+..+.. .. ......|+++|+++++..+. .+.
T Consensus 199 f~pdg~~~Yv~~e~s~~v~v~~~~~~~g-----------~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~ 267 (345)
T PF10282_consen 199 FSPDGKYAYVVNELSNTVSVFDYDPSDG-----------SLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSN 267 (345)
T ss_dssp E-TTSSEEEEEETTTTEEEEEEEETTTT-----------EEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTT
T ss_pred EcCCcCEEEEecCCCCcEEEEeecccCC-----------ceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCC
Confidence 678888664 555678899999762211 2222332221 01 22578899999999666654 566
Q ss_pred cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe-CCCcEEEEEcC
Q psy14817 74 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS-DDGDVKLWQIK 134 (138)
Q Consensus 74 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~v~~wd~~ 134 (138)
+|.+|+++...+. .. ..... .......+.+.++|+ +++|+.++ .++.|.+|++.
T Consensus 268 sI~vf~~d~~~g~---l~--~~~~~-~~~G~~Pr~~~~s~~-g~~l~Va~~~s~~v~vf~~d 322 (345)
T PF10282_consen 268 SISVFDLDPATGT---LT--LVQTV-PTGGKFPRHFAFSPD-GRYLYVANQDSNTVSVFDID 322 (345)
T ss_dssp EEEEEEECTTTTT---EE--EEEEE-EESSSSEEEEEE-TT-SSEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEEecCCCc---eE--EEEEE-eCCCCCccEEEEeCC-CCEEEEEecCCCeEEEEEEe
Confidence 8999999543211 11 11111 122345789999999 88887776 57789999764
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.00054 Score=43.85 Aligned_cols=115 Identities=10% Similarity=0.094 Sum_probs=73.8
Q ss_pred ccCCCeEEEeeC-CCcEEEeeccCCCCCCCccCCCCCCceEEeEEec----CCC----ccCeEEEEEecCCCeEEEeeC-
Q psy14817 2 IQTGSRLATCSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS----GHH----GRTIYDISWCHLTDLIATACG- 71 (138)
Q Consensus 2 s~~~~~l~t~s~-d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~v~~v~~~~~~~~~~s~~~- 71 (138)
+++|++++++.+ -|.|.++-++....... .+..+. +.| ...++...+.|+++++++...
T Consensus 97 d~~g~~vf~AnY~~g~v~v~p~~~dG~l~~-----------~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG 165 (346)
T COG2706 97 DEDGRFVFVANYHSGSVSVYPLQADGSLQP-----------VVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLG 165 (346)
T ss_pred CCCCCEEEEEEccCceEEEEEcccCCcccc-----------ceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecC
Confidence 568888888875 46888888765433221 111111 001 223788999999998877653
Q ss_pred CCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-CCcEEEEEcCC
Q psy14817 72 DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-DGDVKLWQIKL 135 (138)
Q Consensus 72 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~v~~wd~~~ 135 (138)
-..|.+|++..+.-. .. ..... ......+.|.|+|+ +++....+. +++|.+|....
T Consensus 166 ~Dri~~y~~~dg~L~----~~--~~~~v-~~G~GPRHi~FHpn-~k~aY~v~EL~stV~v~~y~~ 222 (346)
T COG2706 166 TDRIFLYDLDDGKLT----PA--DPAEV-KPGAGPRHIVFHPN-GKYAYLVNELNSTVDVLEYNP 222 (346)
T ss_pred CceEEEEEcccCccc----cc--ccccc-CCCCCcceEEEcCC-CcEEEEEeccCCEEEEEEEcC
Confidence 236999999855410 00 00111 34467789999999 888766665 99999998875
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.00016 Score=47.72 Aligned_cols=136 Identities=12% Similarity=0.078 Sum_probs=87.9
Q ss_pred ccCCCeEEEeeC-CCcEEEeeccCCCCCCCccC------------CCC--------------------CCceEEeEEecC
Q psy14817 2 IQTGSRLATCSD-DATVKIWKEYKPGNSAGIPT------------PDN--------------------DSVWKCVCTLSG 48 (138)
Q Consensus 2 s~~~~~l~t~s~-d~~v~iw~~~~~~~~~~~~~------------~~~--------------------~~~~~~~~~~~~ 48 (138)
|.++.+++|++. |..++++|+..-.....+.. ++. .........+.+
T Consensus 62 S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkk 141 (558)
T KOG0882|consen 62 SYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKK 141 (558)
T ss_pred cccceeEeeccCcccceeEEEeeccchhhhcccccCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecc
Confidence 457888999888 99999999754332211100 000 000011122233
Q ss_pred CCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC-CCCCceeeeee----eeeeecccccceeEEEEccCCCCEEEEEe
Q psy14817 49 HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE-AGDSDMVSFDL----VHTEHRAHNQDVNCVAWNPVVPGMLASCS 123 (138)
Q Consensus 49 ~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 123 (138)
-|..+|.++.+++.+..+++....|.|.-|..... +.+.....+.. -...+........++.++|+ +..+.+-+
T Consensus 142 lH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~-g~qistl~ 220 (558)
T KOG0882|consen 142 LHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPD-GAQISTLN 220 (558)
T ss_pred cccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccc-cCcccccC
Confidence 37889999999999999999988899999987731 10011111111 11112234567789999999 99999999
Q ss_pred CCCcEEEEEcCCCCC
Q psy14817 124 DDGDVKLWQIKLENL 138 (138)
Q Consensus 124 ~d~~v~~wd~~~~~~ 138 (138)
.|..|++++.+++++
T Consensus 221 ~DrkVR~F~~KtGkl 235 (558)
T KOG0882|consen 221 PDRKVRGFVFKTGKL 235 (558)
T ss_pred cccEEEEEEeccchh
Confidence 999999999998864
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.05 E-value=6.1e-05 Score=47.57 Aligned_cols=120 Identities=23% Similarity=0.329 Sum_probs=75.1
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC-----------CccCeEEEEEecCCC--eEEEe
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-----------HGRTIYDISWCHLTD--LIATA 69 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~v~~v~~~~~~~--~~~s~ 69 (138)
..|.++++|...|.|-+|.-..... -..+....++++ -...|..+.|..++. .++..
T Consensus 36 ~tg~YlatGDkgGRVvlfer~~s~~----------ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLls 105 (460)
T COG5170 36 ETGLYLATGDKGGRVVLFEREKSYG----------CEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLS 105 (460)
T ss_pred cccceEeecCCCceEEEeecccccc----------cchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEe
Confidence 4688999999999999998543320 000111222221 134688899987664 67777
Q ss_pred eCCCcEEEEeccCCC------------------CCC--------------ceeeeeeeeee-ecccccceeEEEEccCCC
Q psy14817 70 CGDDAIRIFKENPEA------------------GDS--------------DMVSFDLVHTE-HRAHNQDVNCVAWNPVVP 116 (138)
Q Consensus 70 ~~d~~i~i~~~~~~~------------------~~~--------------~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~ 116 (138)
+.|.+|++|.+.... ++. .+.......+. ...|..-++++.++.+ .
T Consensus 106 tNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD-~ 184 (460)
T COG5170 106 TNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSD-K 184 (460)
T ss_pred cCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCc-h
Confidence 789999999888652 000 00001111111 1467788999999988 7
Q ss_pred CEEEEEeCCCcEEEEEcC
Q psy14817 117 GMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 117 ~~l~~~~~d~~v~~wd~~ 134 (138)
+.++++. |-.|.+|.+.
T Consensus 185 et~lSaD-dLrINLWnl~ 201 (460)
T COG5170 185 ETLLSAD-DLRINLWNLE 201 (460)
T ss_pred heeeecc-ceeeeecccc
Confidence 7777764 6778889764
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.00018 Score=53.20 Aligned_cols=133 Identities=9% Similarity=-0.093 Sum_probs=72.4
Q ss_pred cc-CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEe
Q psy14817 2 IQ-TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFK 79 (138)
Q Consensus 2 s~-~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~ 79 (138)
+| ++..+++.+.++.|++|+............ +............. .......|+++|++. ++++-..++.|++||
T Consensus 691 dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~-G~~~~~~g~~~~~~-~~~~P~GIavspdG~~LYVADs~n~~Irv~D 768 (1057)
T PLN02919 691 EPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGD-GYERNLNGSSGTST-SFAQPSGISLSPDLKELYIADSESSSIRALD 768 (1057)
T ss_pred ecCCCeEEEEECCCCeEEEEECCCCeEEEEecC-CccccCCCCccccc-cccCccEEEEeCCCCEEEEEECCCCeEEEEE
Confidence 45 567778888889999999643211000000 00000000000000 123456899999998 556666778999999
Q ss_pred ccCCCCCCc---eeee-eeeeeee-------cccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 80 ENPEAGDSD---MVSF-DLVHTEH-------RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~---~~~~-~~~~~~~-------~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+..+..... .... ....... ...-.....+++.++ ++++++-..++.|++||..++.
T Consensus 769 ~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~d-G~LYVADs~N~rIrviD~~tg~ 836 (1057)
T PLN02919 769 LKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKD-GQIYVADSYNHKIKKLDPATKR 836 (1057)
T ss_pred CCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCC-CcEEEEECCCCEEEEEECCCCe
Confidence 875430000 0000 0000000 001123467889998 8888888899999999987653
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=98.01 E-value=7.6e-05 Score=50.95 Aligned_cols=75 Identities=25% Similarity=0.372 Sum_probs=58.6
Q ss_pred ccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeeccccccee-EEEEccCCCCEEEEEeCCCcEE
Q psy14817 51 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVN-CVAWNPVVPGMLASCSDDGDVK 129 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~d~~v~ 129 (138)
...+..+.|+|....+|.+..+|.+.++.+.... .-.. .-+...++ +++|.|+ +..++.|-.||+|+
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n~qR----------lwti-p~p~~~v~~sL~W~~D-GkllaVg~kdG~I~ 87 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLNWQR----------LWTI-PIPGENVTASLCWRPD-GKLLAVGFKDGTIR 87 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEeccce----------eEec-cCCCCccceeeeecCC-CCEEEEEecCCeEE
Confidence 3467789999999999999999998888776322 1111 12334444 9999999 99999999999999
Q ss_pred EEEcCCCC
Q psy14817 130 LWQIKLEN 137 (138)
Q Consensus 130 ~wd~~~~~ 137 (138)
+.|...+.
T Consensus 88 L~Dve~~~ 95 (665)
T KOG4640|consen 88 LHDVEKGG 95 (665)
T ss_pred EEEccCCC
Confidence 99998764
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.0015 Score=43.74 Aligned_cols=108 Identities=7% Similarity=-0.012 Sum_probs=59.2
Q ss_pred CccCCCe-EEEeeCC---CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeE-EEeeCCC--
Q psy14817 1 MIQTGSR-LATCSDD---ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACGDD-- 73 (138)
Q Consensus 1 ~s~~~~~-l~t~s~d---~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~-~s~~~d~-- 73 (138)
|||+|+. ++..+.+ ..|.++|+..... +.+.. ..+......|+|+|..+ ++.+.++
T Consensus 195 wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~-------------~~lt~----~~g~~~~~~~SPDG~~la~~~~~~g~~ 257 (419)
T PRK04043 195 WANKEQTAFYYTSYGERKPTLYKYNLYTGKK-------------EKIAS----SQGMLVVSDVSKDGSKLLLTMAPKGQP 257 (419)
T ss_pred ECCCCCcEEEEEEccCCCCEEEEEECCCCcE-------------EEEec----CCCcEEeeEECCCCCEEEEEEccCCCc
Confidence 6899984 5544443 4566667533221 22222 23455677899999844 4444444
Q ss_pred cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe-CCC--cEEEEEcCCCC
Q psy14817 74 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS-DDG--DVKLWQIKLEN 137 (138)
Q Consensus 74 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~--~v~~wd~~~~~ 137 (138)
.|.++++..+. ...+. .+........|+|+ ++.++..+ ..+ .|.+.|+.+++
T Consensus 258 ~Iy~~dl~~g~----------~~~LT-~~~~~d~~p~~SPD-G~~I~F~Sdr~g~~~Iy~~dl~~g~ 312 (419)
T PRK04043 258 DIYLYDTNTKT----------LTQIT-NYPGIDVNGNFVED-DKRIVFVSDRLGYPNIFMKKLNSGS 312 (419)
T ss_pred EEEEEECCCCc----------EEEcc-cCCCccCccEECCC-CCEEEEEECCCCCceEEEEECCCCC
Confidence 46666765543 22221 22222334579999 77665554 333 46666766543
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00026 Score=49.89 Aligned_cols=105 Identities=17% Similarity=0.224 Sum_probs=74.9
Q ss_pred CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCC------------CeEEEeeCCC
Q psy14817 6 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT------------DLIATACGDD 73 (138)
Q Consensus 6 ~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~------------~~~~s~~~d~ 73 (138)
.+||-||. ..|.+-|.+.- +.+..+.. |+..|+.|+|.|.. ..++++...|
T Consensus 27 GLiAygsh-slV~VVDs~s~---------------q~iqsie~-h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~G 89 (1062)
T KOG1912|consen 27 GLIAYGSH-SLVSVVDSRSL---------------QLIQSIEL-HQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISG 89 (1062)
T ss_pred ceEEEecC-ceEEEEehhhh---------------hhhhcccc-CccceeEEEeccCCCchhccCccccceeEEeccccC
Confidence 35565553 57777775433 44677776 89999999998742 2577788889
Q ss_pred cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCC--C-CEEEEEeCCCcEEEEEcCCCC
Q psy14817 74 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV--P-GMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 74 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~-~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.|.+||+.... ....+..+..++..++|-+.. . .+|+.-.....+.+|+..+|+
T Consensus 90 rIil~d~~~~s----------~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~ 146 (1062)
T KOG1912|consen 90 RIILVDFVLAS----------VINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGE 146 (1062)
T ss_pred cEEEEEehhhh----------hhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCc
Confidence 99999999776 445555777888899886531 3 456665667789999887775
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0015 Score=41.62 Aligned_cols=35 Identities=17% Similarity=0.303 Sum_probs=28.2
Q ss_pred ccceeEEEEccCCCC-EEEEEeCCCcEEEEEcCCCCC
Q psy14817 103 NQDVNCVAWNPVVPG-MLASCSDDGDVKLWQIKLENL 138 (138)
Q Consensus 103 ~~~v~~~~~~~~~~~-~l~~~~~d~~v~~wd~~~~~~ 138 (138)
...+-+++++++ +. +.+|+...+.+.+||..++++
T Consensus 216 ~~Y~gSIa~~~~-g~~ia~tsPrGg~~~~~d~~tg~~ 251 (305)
T PF07433_consen 216 NGYIGSIAADRD-GRLIAVTSPRGGRVAVWDAATGRL 251 (305)
T ss_pred CCceEEEEEeCC-CCEEEEECCCCCEEEEEECCCCCE
Confidence 467889999988 65 457777899999999988763
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.0021 Score=40.11 Aligned_cols=70 Identities=20% Similarity=0.256 Sum_probs=46.4
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
+++|+.||.. .|..|.|-..+..-. ....+|. +.....-.=..++|+||+..++.+...|+|++||+.
T Consensus 6 ~~~Gk~lAi~-qd~~iEiRsa~Ddf~---------si~~kcq--VpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~ 73 (282)
T PF15492_consen 6 SSDGKLLAIL-QDQCIEIRSAKDDFS---------SIIGKCQ--VPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLM 73 (282)
T ss_pred cCCCcEEEEE-eccEEEEEeccCCch---------heeEEEe--cCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecc
Confidence 5678888765 677888777543322 1111221 111122344679999999999999999999999998
Q ss_pred CC
Q psy14817 82 PE 83 (138)
Q Consensus 82 ~~ 83 (138)
..
T Consensus 74 g~ 75 (282)
T PF15492_consen 74 GS 75 (282)
T ss_pred cc
Confidence 54
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.0025 Score=40.94 Aligned_cols=120 Identities=8% Similarity=0.076 Sum_probs=69.9
Q ss_pred CccCCCeEEEeeC-CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee-CCCcEEEE
Q psy14817 1 MIQTGSRLATCSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~-d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~-~d~~i~i~ 78 (138)
|.|++++++++.. --.|.+|++........ . ...+. .......|.|+|++++....+ .+++|.+|
T Consensus 152 ~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~----------~-~~~v~--~G~GPRHi~FHpn~k~aY~v~EL~stV~v~ 218 (346)
T COG2706 152 FTPDGRYLVVPDLGTDRIFLYDLDDGKLTPA----------D-PAEVK--PGAGPRHIVFHPNGKYAYLVNELNSTVDVL 218 (346)
T ss_pred eCCCCCEEEEeecCCceEEEEEcccCccccc----------c-ccccC--CCCCcceEEEcCCCcEEEEEeccCCEEEEE
Confidence 5789999888754 23788888763221100 0 11122 345678899999999655544 58899999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-CCcEEEEEcC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-DGDVKLWQIK 134 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~v~~wd~~ 134 (138)
......+.....................-.+.++++ +++|..+.. ...|.+|.+.
T Consensus 219 ~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~d-GrFLYasNRg~dsI~~f~V~ 274 (346)
T COG2706 219 EYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPD-GRFLYASNRGHDSIAVFSVD 274 (346)
T ss_pred EEcCCCceEEEeeeeccCccccCCCCceeEEEECCC-CCEEEEecCCCCeEEEEEEc
Confidence 998753111111111111001123346667888898 888877764 3356666543
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.003 Score=41.27 Aligned_cols=111 Identities=5% Similarity=0.038 Sum_probs=69.1
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC------CccCeEEEEEecCCCeEEEee-------
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH------HGRTIYDISWCHLTDLIATAC------- 70 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~v~~~~~~~~~~s~~------- 70 (138)
+|+++....+ |.|.+-|+........ +....+... ..+...-+++++++..++...
T Consensus 205 dg~~~~vs~e-G~V~~id~~~~~~~~~----------~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~t 273 (352)
T TIGR02658 205 SGRLVWPTYT-GKIFQIDLSSGDAKFL----------PAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWT 273 (352)
T ss_pred CCcEEEEecC-CeEEEEecCCCcceec----------ceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCcccc
Confidence 7777776655 9999999654332111 111111110 112333499999998655532
Q ss_pred ---CCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCC-EEEEEe-CCCcEEEEEcCCCC
Q psy14817 71 ---GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCS-DDGDVKLWQIKLEN 137 (138)
Q Consensus 71 ---~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~-~d~~v~~wd~~~~~ 137 (138)
..+.|.++|....+ ...... -...+..++++|+ +. .|+..+ .++.|.++|..+++
T Consensus 274 hk~~~~~V~ViD~~t~k---------vi~~i~--vG~~~~~iavS~D-gkp~lyvtn~~s~~VsViD~~t~k 333 (352)
T TIGR02658 274 HKTASRFLFVVDAKTGK---------RLRKIE--LGHEIDSINVSQD-AKPLLYALSTGDKTLYIFDAETGK 333 (352)
T ss_pred ccCCCCEEEEEECCCCe---------EEEEEe--CCCceeeEEECCC-CCeEEEEeCCCCCcEEEEECcCCe
Confidence 11468898988765 222222 2458899999999 77 777666 57889999987764
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0002 Score=50.20 Aligned_cols=83 Identities=22% Similarity=0.378 Sum_probs=60.5
Q ss_pred EEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEE
Q psy14817 44 CTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC 122 (138)
Q Consensus 44 ~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 122 (138)
..+.+ |...|+.+-|+|+.+ .+++++-|..+..||++... ........-...-..++|+...+..+ ..
T Consensus 108 f~lhg-hsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~---------~p~ys~~~w~s~asqVkwnyk~p~vl-as 176 (1081)
T KOG0309|consen 108 FVLHG-HSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPH---------RPFYSTSSWRSAASQVKWNYKDPNVL-AS 176 (1081)
T ss_pred EEEec-CccceeccccCCCCCcceeeccccccceeeeccCCC---------cceeeeecccccCceeeecccCcchh-hh
Confidence 44556 889999999999887 89999999999999998654 12222223344557789987634444 55
Q ss_pred eCCCcEEEEEcCCCC
Q psy14817 123 SDDGDVKLWQIKLEN 137 (138)
Q Consensus 123 ~~d~~v~~wd~~~~~ 137 (138)
+....+++||.+-+.
T Consensus 177 shg~~i~vwd~r~gs 191 (1081)
T KOG0309|consen 177 SHGNDIFVWDLRKGS 191 (1081)
T ss_pred ccCCceEEEeccCCC
Confidence 667789999998653
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0029 Score=42.51 Aligned_cols=103 Identities=13% Similarity=0.104 Sum_probs=75.6
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCC-cEEEEeccC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AIRIFKENP 82 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~-~i~i~~~~~ 82 (138)
+|.+++..|. |...|.+.-.. ....+ + +.+.|.-.++.-+++-++.|..|| .+-|++.+.
T Consensus 331 ~Gd~ia~VSR-GkaFi~~~~~~----------------~~iqv-~-~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~ 391 (668)
T COG4946 331 NGDYIALVSR-GKAFIMRPWDG----------------YSIQV-G-KKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDG 391 (668)
T ss_pred CCcEEEEEec-CcEEEECCCCC----------------eeEEc-C-CCCceEEEEEccCCcceEEeccCCceEEEEecCC
Confidence 6788888887 45555442111 11122 2 566788888888888888899998 899999998
Q ss_pred CCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 83 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
++ ..+. ...-+.|.++..+++ +..++.+.....+-+.|+.++.
T Consensus 392 ~e----------~kr~-e~~lg~I~av~vs~d-GK~~vvaNdr~el~vididngn 434 (668)
T COG4946 392 GE----------VKRI-EKDLGNIEAVKVSPD-GKKVVVANDRFELWVIDIDNGN 434 (668)
T ss_pred ce----------EEEe-eCCccceEEEEEcCC-CcEEEEEcCceEEEEEEecCCC
Confidence 75 3332 355678999999999 9999999998889999988775
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00021 Score=32.41 Aligned_cols=34 Identities=24% Similarity=0.695 Sum_probs=29.8
Q ss_pred ccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 103 NQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 103 ~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
...|..++|+|. .++++.++.+|.|.++.++.++
T Consensus 11 ~~~v~~~~w~P~-mdLiA~~t~~g~v~v~Rl~~qr 44 (47)
T PF12894_consen 11 PSRVSCMSWCPT-MDLIALGTEDGEVLVYRLNWQR 44 (47)
T ss_pred CCcEEEEEECCC-CCEEEEEECCCeEEEEECCCcC
Confidence 456899999999 9999999999999999986543
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00017 Score=50.43 Aligned_cols=85 Identities=18% Similarity=0.298 Sum_probs=65.9
Q ss_pred ccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceee-----eeeeeeeecccccceeEEEEccCCCCEEEEEeCC
Q psy14817 51 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVS-----FDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD 125 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 125 (138)
.....|+.|+....++++|+.||.+++..+.+.....+... .......+.+|...|..+.|+.+ .+.|.+...+
T Consensus 14 nvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~-~QKLTtSDt~ 92 (1189)
T KOG2041|consen 14 NVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNEN-NQKLTTSDTS 92 (1189)
T ss_pred CceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccc-cccccccCCC
Confidence 45788999999999999999999999998876553222111 11122344689999999999998 8999999999
Q ss_pred CcEEEEEcCCC
Q psy14817 126 GDVKLWQIKLE 136 (138)
Q Consensus 126 ~~v~~wd~~~~ 136 (138)
|.|.+|-+-.+
T Consensus 93 GlIiVWmlykg 103 (1189)
T KOG2041|consen 93 GLIIVWMLYKG 103 (1189)
T ss_pred ceEEEEeeecc
Confidence 99999976543
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00025 Score=46.21 Aligned_cols=67 Identities=12% Similarity=0.125 Sum_probs=54.4
Q ss_pred CccCCC-eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEE
Q psy14817 1 MIQTGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~-~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~ 78 (138)
|||..+ ++..++.+..|+|.|++.. .++..+.. + ..+++++|+.+.. ++.+|..+|.|.+|
T Consensus 201 fSp~~~GLl~~asl~nkiki~dlet~---------------~~vssy~a-~-~~~wSC~wDlde~h~IYaGl~nG~Vlvy 263 (463)
T KOG1645|consen 201 FSPFNEGLLGLASLGNKIKIMDLETS---------------CVVSSYIA-Y-NQIWSCCWDLDERHVIYAGLQNGMVLVY 263 (463)
T ss_pred cCccccceeeeeccCceEEEEecccc---------------eeeeheec-c-CCceeeeeccCCcceeEEeccCceEEEE
Confidence 577666 7889999999999998654 23455554 3 7899999999886 89999999999999
Q ss_pred eccCCC
Q psy14817 79 KENPEA 84 (138)
Q Consensus 79 ~~~~~~ 84 (138)
|++..+
T Consensus 264 D~R~~~ 269 (463)
T KOG1645|consen 264 DMRQPE 269 (463)
T ss_pred EccCCC
Confidence 999765
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.0034 Score=46.20 Aligned_cols=112 Identities=13% Similarity=0.309 Sum_probs=69.3
Q ss_pred CccCCCeEEEeeC---CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEE
Q psy14817 1 MIQTGSRLATCSD---DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s~---d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i 77 (138)
|-|+|++||+... ...|.+|.. ++.+.. +....+.. ....|..+.|++++..|+....|. |++
T Consensus 264 WrPsG~lIA~~q~~~~~~~VvFfEr-NGLrhg-----------eF~l~~~~-~~~~v~~l~Wn~ds~iLAv~~~~~-vqL 329 (928)
T PF04762_consen 264 WRPSGNLIASSQRLPDRHDVVFFER-NGLRHG-----------EFTLRFDP-EEEKVIELAWNSDSEILAVWLEDR-VQL 329 (928)
T ss_pred CCCCCCEEEEEEEcCCCcEEEEEec-CCcEee-----------eEecCCCC-CCceeeEEEECCCCCEEEEEecCC-ceE
Confidence 5789999998864 334445542 221110 11112212 356889999999999988877654 999
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
|...... +.............+..+.|+|..+..|...+.++.+..+++
T Consensus 330 Wt~~NYH-------WYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~ 378 (928)
T PF04762_consen 330 WTRSNYH-------WYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDF 378 (928)
T ss_pred EEeeCCE-------EEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEE
Confidence 9877543 222222222233445569999986777888887777766654
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0014 Score=46.71 Aligned_cols=113 Identities=8% Similarity=0.066 Sum_probs=72.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccC-eEEEEEecCCCeEEEeeCCC-----c
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRT-IYDISWCHLTDLIATACGDD-----A 74 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~v~~~~~~~~~~s~~~d~-----~ 74 (138)
|++++..+|-|+.||.|-+.+-.- +.+..++. +... |..+.......++++.+.|+ .
T Consensus 31 ~~s~~~~vvigt~~G~V~~Ln~s~----------------~~~~~fqa-~~~siv~~L~~~~~~~~L~sv~Ed~~~np~l 93 (933)
T KOG2114|consen 31 CSSSTGSVVIGTADGRVVILNSSF----------------QLIRGFQA-YEQSIVQFLYILNKQNFLFSVGEDEQGNPVL 93 (933)
T ss_pred EcCCCceEEEeeccccEEEecccc----------------eeeehhee-cchhhhhHhhcccCceEEEEEeecCCCCceE
Confidence 467888999999999999888321 23355555 4444 44444333335777766554 4
Q ss_pred EEEEeccCCCCCCceeeeeeeeee----ecccccceeEEEEccCCCCEEEEEeCCCcEEEEE
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTE----HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd 132 (138)
+++|+++...+... +.+.-..+. ......++..++.+.+ -..++.|-.+|.|..+.
T Consensus 94 lkiw~lek~~~n~s-P~c~~~~ri~~~~np~~~~p~s~l~Vs~~-l~~Iv~Gf~nG~V~~~~ 153 (933)
T KOG2114|consen 94 LKIWDLEKVDKNNS-PQCLYEHRIFTIKNPTNPSPASSLAVSED-LKTIVCGFTNGLVICYK 153 (933)
T ss_pred EEEecccccCCCCC-cceeeeeeeeccCCCCCCCcceEEEEEcc-ccEEEEEecCcEEEEEc
Confidence 89999987642221 222101111 1124568888999988 88999999999988763
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.002 Score=34.73 Aligned_cols=91 Identities=14% Similarity=0.189 Sum_probs=60.3
Q ss_pred CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCC
Q psy14817 6 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAG 85 (138)
Q Consensus 6 ~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~ 85 (138)
+.|+.||+|..||+|+-. ..+..+.. ...|+++.-... ..|+-+..+|+|-+|+-....
T Consensus 16 ~eLlvGs~D~~IRvf~~~-----------------e~~~Ei~e--~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~Rl- 74 (111)
T PF14783_consen 16 NELLVGSDDFEIRVFKGD-----------------EIVAEITE--TDKVTSLCSLGG-GRFAYALANGTVGVYDRSQRL- 74 (111)
T ss_pred ceEEEecCCcEEEEEeCC-----------------cEEEEEec--ccceEEEEEcCC-CEEEEEecCCEEEEEeCccee-
Confidence 578899999999999942 33556654 567777775544 678888899999999764321
Q ss_pred CCceeeeeeeeeeecccccceeEEEEcc---CCCCEEEEEeCCCcEE
Q psy14817 86 DSDMVSFDLVHTEHRAHNQDVNCVAWNP---VVPGMLASCSDDGDVK 129 (138)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~l~~~~~d~~v~ 129 (138)
+ .......+.++.+.. +...-|++|-.+|.|-
T Consensus 75 ------W------RiKSK~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 75 ------W------RIKSKNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred ------e------eeccCCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 1 112233466665543 2234688888888875
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=97.66 E-value=6.4e-05 Score=49.53 Aligned_cols=116 Identities=18% Similarity=0.180 Sum_probs=81.1
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC-CCcEEEEeccCC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-DDAIRIFKENPE 83 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~-d~~i~i~~~~~~ 83 (138)
.+++.+++.||.++.|.-... ...+.+..+.. |-..+.+++.+-++..+.+.+. |..++++|+..-
T Consensus 20 a~fiiqASlDGh~KFWkKs~i------------sGvEfVKhFra-HL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~ 86 (558)
T KOG0882|consen 20 AKFIIQASLDGHKKFWKKSRI------------SGVEFVKHFRA-HLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENF 86 (558)
T ss_pred hheEEeeecchhhhhcCCCCc------------cceeehhhhHH-HHHHHHhhhccccceeEeeccCcccceeEEEeecc
Confidence 468899999999999995331 11234555565 7778888888888888888776 888888877754
Q ss_pred CCC------------------Cc---e-----------e------eeeeeeeeecccccceeEEEEccCCCCEEEEEeCC
Q psy14817 84 AGD------------------SD---M-----------V------SFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD 125 (138)
Q Consensus 84 ~~~------------------~~---~-----------~------~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 125 (138)
... .. . . ..........-|..+|..+.+.+. +..+++....
T Consensus 87 DminmiKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa-~Ds~vSiD~~ 165 (558)
T KOG0882|consen 87 DMINMIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQA-GDSAVSIDIS 165 (558)
T ss_pred chhhhcccccCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeecc-ccceeecccc
Confidence 300 00 0 0 000011222457789999999998 9999999999
Q ss_pred CcEEEEEcC
Q psy14817 126 GDVKLWQIK 134 (138)
Q Consensus 126 ~~v~~wd~~ 134 (138)
|.|..|...
T Consensus 166 gmVEyWs~e 174 (558)
T KOG0882|consen 166 GMVEYWSAE 174 (558)
T ss_pred ceeEeecCC
Confidence 999999876
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0052 Score=41.81 Aligned_cols=73 Identities=16% Similarity=0.297 Sum_probs=54.2
Q ss_pred ccCeEEEEEecCCCeEEEee--CCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC---C
Q psy14817 51 GRTIYDISWCHLTDLIATAC--GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD---D 125 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~--~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---d 125 (138)
.++|+++.|++++..|+.+. .=-++.|||++... +. .-..++-+++-|+|. +++++.++. -
T Consensus 270 ~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~~----------v~---df~egpRN~~~fnp~-g~ii~lAGFGNL~ 335 (566)
T KOG2315|consen 270 EGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGKP----------VF---DFPEGPRNTAFFNPH-GNIILLAGFGNLP 335 (566)
T ss_pred CCCceEEEECCCCCEEEEEEecccceEEEEcCCCCE----------eE---eCCCCCccceEECCC-CCEEEEeecCCCC
Confidence 78999999999998666543 23468899988532 22 223467788999999 998887764 6
Q ss_pred CcEEEEEcCCCC
Q psy14817 126 GDVKLWQIKLEN 137 (138)
Q Consensus 126 ~~v~~wd~~~~~ 137 (138)
|.+-|||....+
T Consensus 336 G~mEvwDv~n~K 347 (566)
T KOG2315|consen 336 GDMEVWDVPNRK 347 (566)
T ss_pred CceEEEeccchh
Confidence 889999987643
|
|
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00046 Score=50.14 Aligned_cols=96 Identities=9% Similarity=0.100 Sum_probs=63.0
Q ss_pred CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCC
Q psy14817 6 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAG 85 (138)
Q Consensus 6 ~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~ 85 (138)
-.++.|+..|.+...|....-. +...-. .-.++|++++|+.+|..++.|-.+|.|.+||.....
T Consensus 100 ~~ivi~Ts~ghvl~~d~~~nL~--------------~~~~ne-~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k- 163 (1206)
T KOG2079|consen 100 VPIVIGTSHGHVLLSDMTGNLG--------------PLHQNE-RVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAK- 163 (1206)
T ss_pred eeEEEEcCchhhhhhhhhcccc--------------hhhcCC-ccCCcceeeEecCCCceeccccCCCcEEEEEccCCc-
Confidence 3577788888888888643211 111111 136799999999999999999999999999999765
Q ss_pred CCceeeeeeeeeeecccccceeEE---EEccCCCCEEEEEeCCCc
Q psy14817 86 DSDMVSFDLVHTEHRAHNQDVNCV---AWNPVVPGMLASCSDDGD 127 (138)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~---~~~~~~~~~l~~~~~d~~ 127 (138)
..+....+..+...+ .+..+ ...++++...|.
T Consensus 164 ---------~l~~i~e~~ap~t~vi~v~~t~~-nS~llt~D~~Gs 198 (1206)
T KOG2079|consen 164 ---------ILKVITEHGAPVTGVIFVGRTSQ-NSKLLTSDTGGS 198 (1206)
T ss_pred ---------ceeeeeecCCccceEEEEEEeCC-CcEEEEccCCCc
Confidence 333333444433333 33333 446777777775
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00039 Score=31.56 Aligned_cols=31 Identities=29% Similarity=0.581 Sum_probs=28.2
Q ss_pred ccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 51 GRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
...|.++.|+|...+++.+..+|.|.++.+.
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence 4578999999999999999999999999884
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0011 Score=47.58 Aligned_cols=69 Identities=12% Similarity=0.149 Sum_probs=55.1
Q ss_pred eEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe---------C
Q psy14817 54 IYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS---------D 124 (138)
Q Consensus 54 v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---------~ 124 (138)
+.-++. .++.+++|...|+|.+-|.+..+ ..+.+.+|++.|.++.. . ++.|++++ .
T Consensus 180 v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~----------~iht~~aHs~siSDfDv--~-GNlLitCG~S~R~~~l~~ 244 (1118)
T KOG1275|consen 180 VTIMRY--NNRNLFCGDTRGTVFLRDPNSFE----------TIHTFDAHSGSISDFDV--Q-GNLLITCGYSMRRYNLAM 244 (1118)
T ss_pred eEEEEe--cCcEEEeecccceEEeecCCcCc----------eeeeeeccccceeeeec--c-CCeEEEeecccccccccc
Confidence 555544 46799999999999999998776 56666799999988776 3 78888887 4
Q ss_pred CCcEEEEEcCCCC
Q psy14817 125 DGDVKLWQIKLEN 137 (138)
Q Consensus 125 d~~v~~wd~~~~~ 137 (138)
|..|+|||+|+.+
T Consensus 245 D~FvkVYDLRmmr 257 (1118)
T KOG1275|consen 245 DPFVKVYDLRMMR 257 (1118)
T ss_pred cchhhhhhhhhhh
Confidence 7788999998754
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0014 Score=44.62 Aligned_cols=96 Identities=16% Similarity=0.221 Sum_probs=59.5
Q ss_pred CccCCCeEEEeeC-----------CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEe
Q psy14817 1 MIQTGSRLATCSD-----------DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA 69 (138)
Q Consensus 1 ~s~~~~~l~t~s~-----------d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~ 69 (138)
|||+-+||+|-|. ...++|||+.+...... ...+.. ....-.-.+|+.++++++.-
T Consensus 257 fSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrs------------F~~~~~-~~~~WP~frWS~DdKy~Arm 323 (698)
T KOG2314|consen 257 FSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRS------------FPVIKS-PYLKWPIFRWSHDDKYFARM 323 (698)
T ss_pred cCCccceEEEecCCccccCcccCCCceEEEEEccccchhcc------------eeccCC-CccccceEEeccCCceeEEe
Confidence 7999999999864 36889999876644211 111122 11122346899999999887
Q ss_pred eCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEE
Q psy14817 70 CGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLAS 121 (138)
Q Consensus 70 ~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 121 (138)
..+ +|.||+..... ......-.-..|....|+|. +++|+.
T Consensus 324 ~~~-sisIyEtpsf~----------lld~Kslki~gIr~FswsP~-~~llAY 363 (698)
T KOG2314|consen 324 TGN-SISIYETPSFM----------LLDKKSLKISGIRDFSWSPT-SNLLAY 363 (698)
T ss_pred ccc-eEEEEecCcee----------eecccccCCccccCcccCCC-cceEEE
Confidence 765 69999876422 11111112346677788887 666654
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0098 Score=40.03 Aligned_cols=106 Identities=11% Similarity=0.049 Sum_probs=55.6
Q ss_pred CccCCCeEE-EeeCCC--cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeE-EEeeCCCc--
Q psy14817 1 MIQTGSRLA-TCSDDA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACGDDA-- 74 (138)
Q Consensus 1 ~s~~~~~l~-t~s~d~--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~-~s~~~d~~-- 74 (138)
|||||+.++ +.+.++ .|.++++.... ...+.. +........|+|+|+.+ ++....+.
T Consensus 240 ~SPDG~~la~~~~~~g~~~Iy~~dl~~g~----------------~~~LT~-~~~~d~~p~~SPDG~~I~F~Sdr~g~~~ 302 (419)
T PRK04043 240 VSKDGSKLLLTMAPKGQPDIYLYDTNTKT----------------LTQITN-YPGIDVNGNFVEDDKRIVFVSDRLGYPN 302 (419)
T ss_pred ECCCCCEEEEEEccCCCcEEEEEECCCCc----------------EEEccc-CCCccCccEECCCCCEEEEEECCCCCce
Confidence 689997665 444444 45555542211 122222 22223345799999844 44434444
Q ss_pred EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC---------CcEEEEEcCCCC
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD---------GDVKLWQIKLEN 137 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---------~~v~~wd~~~~~ 137 (138)
|.+.++..+. ..+.... .. ....|+|+ +..++..... ..|.+.|+.+++
T Consensus 303 Iy~~dl~~g~----------~~rlt~~-g~--~~~~~SPD-G~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~ 360 (419)
T PRK04043 303 IFMKKLNSGS----------VEQVVFH-GK--NNSSVSTY-KNYIVYSSRETNNEFGKNTFNLYLISTNSDY 360 (419)
T ss_pred EEEEECCCCC----------eEeCccC-CC--cCceECCC-CCEEEEEEcCCCcccCCCCcEEEEEECCCCC
Confidence 5566665544 2122111 11 12489999 8877666543 257777776653
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0043 Score=41.86 Aligned_cols=105 Identities=19% Similarity=0.197 Sum_probs=67.7
Q ss_pred CccCCCeEEEee--CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCC---CcE
Q psy14817 1 MIQTGSRLATCS--DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD---DAI 75 (138)
Q Consensus 1 ~s~~~~~l~t~s--~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d---~~i 75 (138)
|.|.++.|++++ .+..+.++|++.. ....+ ....=+.+.|+|.+.+++.++.| |.+
T Consensus 282 W~p~S~~F~vi~g~~pa~~s~~~lr~N----------------l~~~~---Pe~~rNT~~fsp~~r~il~agF~nl~gni 342 (561)
T COG5354 282 WEPLSSRFAVISGYMPASVSVFDLRGN----------------LRFYF---PEQKRNTIFFSPHERYILFAGFDNLQGNI 342 (561)
T ss_pred ecccCCceeEEecccccceeecccccc----------------eEEec---CCcccccccccCcccEEEEecCCccccce
Confidence 567777766655 5778888887542 12222 23445678899999988887665 568
Q ss_pred EEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe------CCCcEEEEEcCCC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS------DDGDVKLWQIKLE 136 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~------~d~~v~~wd~~~~ 136 (138)
.+|+....- .....+ ......-+.|+|+ ++++.+.. .|..+++||+-..
T Consensus 343 ~i~~~~~rf---------~~~~~~--~~~n~s~~~wspd-~qF~~~~~ts~k~~~Dn~i~l~~v~g~ 397 (561)
T COG5354 343 EIFDPAGRF---------KVAGAF--NGLNTSYCDWSPD-GQFYDTDTTSEKLRVDNSIKLWDVYGA 397 (561)
T ss_pred EEeccCCce---------EEEEEe--ecCCceEeeccCC-ceEEEecCCCcccccCcceEEEEecCc
Confidence 899876432 111111 1234455789999 88876653 4788999998654
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.013 Score=38.38 Aligned_cols=95 Identities=8% Similarity=-0.035 Sum_probs=61.8
Q ss_pred CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEe-e---------CCCcEEEEeccCCC
Q psy14817 15 ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA-C---------GDDAIRIFKENPEA 84 (138)
Q Consensus 15 ~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~-~---------~d~~i~i~~~~~~~ 84 (138)
++|.+.|... .+.+.++.. .. .-..+ ++|+++.++.+ + .+..|.+||....+
T Consensus 27 ~~v~ViD~~~---------------~~v~g~i~~-G~-~P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~ 88 (352)
T TIGR02658 27 TQVYTIDGEA---------------GRVLGMTDG-GF-LPNPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHL 88 (352)
T ss_pred ceEEEEECCC---------------CEEEEEEEc-cC-CCcee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCc
Confidence 7888888533 355666665 22 22334 89999855444 4 57789999999876
Q ss_pred CCCceeeeeeeeeeecc------cccceeEEEEccCCCCEEEEEe-C-CCcEEEEEcCCCC
Q psy14817 85 GDSDMVSFDLVHTEHRA------HNQDVNCVAWNPVVPGMLASCS-D-DGDVKLWQIKLEN 137 (138)
Q Consensus 85 ~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~l~~~~-~-d~~v~~wd~~~~~ 137 (138)
....+..+ .......++++|+ +++++... . +..|.+.|+.+++
T Consensus 89 ---------~~~~i~~p~~p~~~~~~~~~~~~ls~d-gk~l~V~n~~p~~~V~VvD~~~~k 139 (352)
T TIGR02658 89 ---------PIADIELPEGPRFLVGTYPWMTSLTPD-NKTLLFYQFSPSPAVGVVDLEGKA 139 (352)
T ss_pred ---------EEeEEccCCCchhhccCccceEEECCC-CCEEEEecCCCCCEEEEEECCCCc
Confidence 11111111 1223346788999 88888776 3 6889999998765
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0025 Score=45.11 Aligned_cols=92 Identities=14% Similarity=0.069 Sum_probs=63.3
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
++.|+-|..+|.|++.+..... ..... |... +.+|.++++|+.||++.|-.+....
T Consensus 49 ~~~~~~GtH~g~v~~~~~~~~~-----------------~~~~~-~s~~------~~~Gey~asCS~DGkv~I~sl~~~~ 104 (846)
T KOG2066|consen 49 DKFFALGTHRGAVYLTTCQGNP-----------------KTNFD-HSSS------ILEGEYVASCSDDGKVVIGSLFTDD 104 (846)
T ss_pred cceeeeccccceEEEEecCCcc-----------------ccccc-cccc------ccCCceEEEecCCCcEEEeeccCCc
Confidence 5678889999999999853321 11111 2222 6678999999999999999887655
Q ss_pred CCCceeeeeeeeeeecccccceeEEEEccC----CCCEEEEEeCCCcEEEEE
Q psy14817 85 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPV----VPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~l~~~~~d~~v~~wd 132 (138)
..... .-..++..++++|+ ....+++|+..| +.++.
T Consensus 105 ----------~~~~~-df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~e 144 (846)
T KOG2066|consen 105 ----------EITQY-DFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSE 144 (846)
T ss_pred ----------cceeE-ecCCcceeEEeccchhhhhhhheeecCcce-EEEeh
Confidence 22211 33468888999886 456788888887 66653
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0026 Score=43.42 Aligned_cols=104 Identities=12% Similarity=0.193 Sum_probs=66.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC---------
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG--------- 71 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--------- 71 (138)
|||-|.||+|--. .-|.+|- ...+..++.+. | ..|..+.|+|...+|++=+.
T Consensus 218 wSP~GTYL~t~Hk-~GI~lWG---------------G~~f~r~~RF~--H-p~Vq~idfSP~EkYLVT~s~~p~~~~~~d 278 (698)
T KOG2314|consen 218 WSPKGTYLVTFHK-QGIALWG---------------GESFDRIQRFY--H-PGVQFIDFSPNEKYLVTYSPEPIIVEEDD 278 (698)
T ss_pred ecCCceEEEEEec-cceeeec---------------CccHHHHHhcc--C-CCceeeecCCccceEEEecCCccccCccc
Confidence 7899999998865 5577787 33333355443 3 35788999999999988432
Q ss_pred --CCcEEEEeccCCCCCCceeeeeeeeeeeccccccee-EEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 72 --DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVN-CVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 72 --d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
-..+.|||+..+.. ...+... .....++ -.+|+-+ ..+++.-..| +|.|++.
T Consensus 279 ~e~~~l~IWDI~tG~l---krsF~~~-----~~~~~~WP~frWS~D-dKy~Arm~~~-sisIyEt 333 (698)
T KOG2314|consen 279 NEGQQLIIWDIATGLL---KRSFPVI-----KSPYLKWPIFRWSHD-DKYFARMTGN-SISIYET 333 (698)
T ss_pred CCCceEEEEEccccch---hcceecc-----CCCccccceEEeccC-CceeEEeccc-eEEEEec
Confidence 14699999998871 1111111 1122333 3578888 8888776664 4777654
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0063 Score=43.82 Aligned_cols=103 Identities=11% Similarity=-0.005 Sum_probs=64.2
Q ss_pred eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCC
Q psy14817 7 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 86 (138)
Q Consensus 7 ~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~ 86 (138)
.-..|-.+..+..||.|..... ..+...+.+. ......|++-. ...+++.|+.+|.||+||-....
T Consensus 544 ~tflGls~n~lfriDpR~~~~k---------~v~~~~k~Y~--~~~~Fs~~aTt-~~G~iavgs~~G~IRLyd~~g~~-- 609 (794)
T PF08553_consen 544 QTFLGLSDNSLFRIDPRLSGNK---------LVDSQSKQYS--SKNNFSCFATT-EDGYIAVGSNKGDIRLYDRLGKR-- 609 (794)
T ss_pred ceEEEECCCceEEeccCCCCCc---------eeeccccccc--cCCCceEEEec-CCceEEEEeCCCcEEeecccchh--
Confidence 3455677888999998754320 0000111121 24456676644 33488889999999999843211
Q ss_pred CceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 87 SDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
....+.+-..+|.++..+.+ |.+++..+... |.+++.
T Consensus 610 --------AKT~lp~lG~pI~~iDvt~D-GkwilaTc~ty-LlLi~t 646 (794)
T PF08553_consen 610 --------AKTALPGLGDPIIGIDVTAD-GKWILATCKTY-LLLIDT 646 (794)
T ss_pred --------hhhcCCCCCCCeeEEEecCC-CcEEEEeecce-EEEEEE
Confidence 22333456789999999999 99988777554 555553
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0023 Score=45.93 Aligned_cols=60 Identities=15% Similarity=0.282 Sum_probs=42.6
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
..+||.|+.+|-||+||.-. . +.--.+.+ -..+|.+|..+.+|.++++.+.. .|.+++..
T Consensus 588 ~G~iavgs~~G~IRLyd~~g--~-------------~AKT~lp~-lG~pI~~iDvt~DGkwilaTc~t-yLlLi~t~ 647 (794)
T PF08553_consen 588 DGYIAVGSNKGDIRLYDRLG--K-------------RAKTALPG-LGDPIIGIDVTADGKWILATCKT-YLLLIDTL 647 (794)
T ss_pred CceEEEEeCCCcEEeecccc--h-------------hhhhcCCC-CCCCeeEEEecCCCcEEEEeecc-eEEEEEEe
Confidence 45899999999999999321 1 11123344 57899999999999988776644 56666654
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0018 Score=28.61 Aligned_cols=32 Identities=22% Similarity=0.415 Sum_probs=27.0
Q ss_pred cceeEEEEccCCC--CEEEEEeCCCcEEEEEcCC
Q psy14817 104 QDVNCVAWNPVVP--GMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 104 ~~v~~~~~~~~~~--~~l~~~~~d~~v~~wd~~~ 135 (138)
+.|.+++|+|+.. ++|+.+-.-+.|.++|+|+
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 3578999998745 6888888899999999985
|
It contains a characteristic DLL sequence motif. |
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.013 Score=39.10 Aligned_cols=83 Identities=14% Similarity=0.102 Sum_probs=53.7
Q ss_pred CeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCC---------------------------------ceeeeeeeeeee
Q psy14817 53 TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS---------------------------------DMVSFDLVHTEH 99 (138)
Q Consensus 53 ~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~---------------------------------~~~~~~~~~~~~ 99 (138)
.|+.+.++++...++.+...|.|.+|.......-. ....-..+....
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 57889999988899999999998888665432000 000011122233
Q ss_pred cccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 100 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 100 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
....++|++++.+ + -.+++.|..+|.+.|.|+|.+.
T Consensus 83 ~~~~g~vtal~~S-~-iGFvaigy~~G~l~viD~RGPa 118 (395)
T PF08596_consen 83 DAKQGPVTALKNS-D-IGFVAIGYESGSLVVIDLRGPA 118 (395)
T ss_dssp ---S-SEEEEEE--B-TSEEEEEETTSEEEEEETTTTE
T ss_pred eccCCcEeEEecC-C-CcEEEEEecCCcEEEEECCCCe
Confidence 3457899999986 4 7899999999999999999864
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0079 Score=40.50 Aligned_cols=108 Identities=17% Similarity=0.161 Sum_probs=57.9
Q ss_pred CccCCCeEE-EeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCe-EEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLA-TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDL-IATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~-t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~-~~s~~~d~~i~i~ 78 (138)
|||+|+.|+ +...|+...||-+...... ...+.. ..+.-..=.|+|+|.. .++.+..|.-.||
T Consensus 245 fspDG~~l~f~~~rdg~~~iy~~dl~~~~--------------~~~Lt~-~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~ 309 (425)
T COG0823 245 FSPDGSKLAFSSSRDGSPDIYLMDLDGKN--------------LPRLTN-GFGINTSPSWSPDGSKIVFTSDRGGRPQIY 309 (425)
T ss_pred CCCCCCEEEEEECCCCCccEEEEcCCCCc--------------ceeccc-CCccccCccCCCCCCEEEEEeCCCCCcceE
Confidence 789998665 5667887777765332221 111221 1122235678999984 4555566765555
Q ss_pred --eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-CCc--EEEEEcCC
Q psy14817 79 --KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-DGD--VKLWQIKL 135 (138)
Q Consensus 79 --~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~--v~~wd~~~ 135 (138)
+.+... ..+.. .....-..-.|+|+ +..++..+. +|. |.+.|+.+
T Consensus 310 ~~~~~g~~----------~~riT-~~~~~~~~p~~Spd-G~~i~~~~~~~g~~~i~~~~~~~ 359 (425)
T COG0823 310 LYDLEGSQ----------VTRLT-FSGGGNSNPVWSPD-GDKIVFESSSGGQWDIDKNDLAS 359 (425)
T ss_pred EECCCCCc----------eeEee-ccCCCCcCccCCCC-CCEEEEEeccCCceeeEEeccCC
Confidence 444333 11111 11122226678999 888776664 343 55555543
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.021 Score=42.28 Aligned_cols=119 Identities=17% Similarity=0.260 Sum_probs=70.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~ 79 (138)
|++++..||..-.|. |.+|... .--|..-+.+.......+..+.|+|... .+...+.++.+..++
T Consensus 312 Wn~ds~iLAv~~~~~-vqLWt~~-------------NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~ 377 (928)
T PF04762_consen 312 WNSDSEILAVWLEDR-VQLWTRS-------------NYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYD 377 (928)
T ss_pred ECCCCCEEEEEecCC-ceEEEee-------------CCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEE
Confidence 688999999987665 9999852 1223333333331234455688998776 455555556554443
Q ss_pred cc----CCCCCC------------ceee----------eeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 80 EN----PEAGDS------------DMVS----------FDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 80 ~~----~~~~~~------------~~~~----------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
+. .+.... .... .++.... ..-...|..++|+++ +..++.-..|+.|.+|..
T Consensus 378 ~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~-l~~~~~v~~vaf~~~-~~~~avl~~d~~l~~~~~ 455 (928)
T PF04762_consen 378 FAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYE-LELPSPVNDVAFSPS-NSRFAVLTSDGSLSIYEW 455 (928)
T ss_pred EEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceE-EcCCCCcEEEEEeCC-CCeEEEEECCCCEEEEEe
Confidence 33 221000 0000 0001111 133578999999998 777888899999999985
Q ss_pred CC
Q psy14817 134 KL 135 (138)
Q Consensus 134 ~~ 135 (138)
..
T Consensus 456 ~~ 457 (928)
T PF04762_consen 456 DL 457 (928)
T ss_pred cC
Confidence 43
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0029 Score=38.45 Aligned_cols=104 Identities=17% Similarity=0.145 Sum_probs=56.0
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEE-EEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI-SWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v-~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
+..++.|+.||.|.+|........ .-.+.. ....|-++ .-..++.+..+++.|+.|+-|++...
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~~--------------~d~~~s-~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~ 134 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGAH--------------SDRVCS-GEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPN 134 (238)
T ss_pred CceEEeecccceEEEecCCccchH--------------HHhhhc-ccccceeccccccccceeEEeccCCceeeeccccC
Confidence 356888999999999986321110 000111 12233322 22233447888899999999988865
Q ss_pred CCCCceeeeeeeeeeecccc-cceeEEEEccCCCCEEEEE--eCCCcEEEEEcC
Q psy14817 84 AGDSDMVSFDLVHTEHRAHN-QDVNCVAWNPVVPGMLASC--SDDGDVKLWQIK 134 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~--~~d~~v~~wd~~ 134 (138)
. .......|. .++..+..... ...+.++ +.|..++.|++.
T Consensus 135 k----------~~g~~g~h~~~~~e~~ivv~s-d~~i~~a~~S~d~~~k~W~ve 177 (238)
T KOG2444|consen 135 K----------VLGYVGQHNFESGEELIVVGS-DEFLKIADTSHDRVLKKWNVE 177 (238)
T ss_pred c----------eeeeeccccCCCcceeEEecC-CceEEeeccccchhhhhcchh
Confidence 4 222222333 33333333333 4555555 666666666653
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0012 Score=45.98 Aligned_cols=71 Identities=8% Similarity=0.069 Sum_probs=53.1
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
|++..++|.|+..|.|.++.+........ ..+......|+..|++++|++++..+++|...|+|..-.+.
T Consensus 85 s~~e~lvAagt~~g~V~v~ql~~~~p~~~----------~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~ 154 (726)
T KOG3621|consen 85 SSVEYLVAAGTASGRVSVFQLNKELPRDL----------DYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELD 154 (726)
T ss_pred cchhHhhhhhcCCceEEeehhhccCCCcc----------eeeccccccCCceEEEEEecccccEEeecCCCceEEEEEec
Confidence 56677888999999999999866333111 11222222378899999999999999999999998887776
Q ss_pred C
Q psy14817 82 P 82 (138)
Q Consensus 82 ~ 82 (138)
.
T Consensus 155 s 155 (726)
T KOG3621|consen 155 S 155 (726)
T ss_pred h
Confidence 5
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.023 Score=35.27 Aligned_cols=80 Identities=10% Similarity=0.062 Sum_probs=51.5
Q ss_pred ccCeEEEEEecCCCeE-EEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEE
Q psy14817 51 GRTIYDISWCHLTDLI-ATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 129 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~-~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~ 129 (138)
....+.|+|+|++..+ ++-+..+.|..+++...... .................-.+++..+ +++.++....+.|.
T Consensus 133 ~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~g~pDG~~vD~~-G~l~va~~~~~~I~ 208 (246)
T PF08450_consen 133 LGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGE---LSNRRVFIDFPGGPGYPDGLAVDSD-GNLWVADWGGGRIV 208 (246)
T ss_dssp ESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCC---EEEEEEEEE-SSSSCEEEEEEEBTT-S-EEEEEETTTEEE
T ss_pred cccccceEECCcchheeecccccceeEEEeccccccc---eeeeeeEEEcCCCCcCCCcceEcCC-CCEEEEEcCCCEEE
Confidence 3457899999999855 56667788999888754310 1110111111122234678889888 88888877888999
Q ss_pred EEEcC
Q psy14817 130 LWQIK 134 (138)
Q Consensus 130 ~wd~~ 134 (138)
+++.+
T Consensus 209 ~~~p~ 213 (246)
T PF08450_consen 209 VFDPD 213 (246)
T ss_dssp EEETT
T ss_pred EECCC
Confidence 99877
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.039 Score=38.86 Aligned_cols=83 Identities=8% Similarity=0.002 Sum_probs=54.4
Q ss_pred ccCeEEEEEecCCCeEE-EeeCCCcEEEEeccCCCCCC--ceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCc
Q psy14817 51 GRTIYDISWCHLTDLIA-TACGDDAIRIFKENPEAGDS--DMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGD 127 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~-s~~~d~~i~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 127 (138)
....+.+.++|||++++ ++..+.++.|.|+......- .......+.... .-.......+|.++ +..+.+-.-|..
T Consensus 320 GKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaev-evGlGPLHTaFDg~-G~aytslf~dsq 397 (635)
T PRK02888 320 PKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEP-ELGLGPLHTAFDGR-GNAYTTLFLDSQ 397 (635)
T ss_pred CCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEee-ccCCCcceEEECCC-CCEEEeEeecce
Confidence 45678999999999654 45568899999998754100 000001111111 12344566788888 888888889999
Q ss_pred EEEEEcCC
Q psy14817 128 VKLWQIKL 135 (138)
Q Consensus 128 v~~wd~~~ 135 (138)
|..|++..
T Consensus 398 v~kwn~~~ 405 (635)
T PRK02888 398 IVKWNIEA 405 (635)
T ss_pred eEEEehHH
Confidence 99999864
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.05 Score=36.01 Aligned_cols=57 Identities=7% Similarity=0.057 Sum_probs=34.2
Q ss_pred CCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEE
Q psy14817 63 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 131 (138)
Q Consensus 63 ~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~w 131 (138)
+..++.++.+|.+.++|...++ .......+...+..--.-. ++.|+.++.||.|..|
T Consensus 320 g~~l~~~~~~G~l~~~d~~tG~----------~~~~~~~~~~~~~~sp~~~--~~~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 320 GGYLVVGDFEGYLHWLSREDGS----------FVARLKTDGSGIASPPVVV--GDGLLVQTRDGDLYAF 376 (377)
T ss_pred CCEEEEEeCCCEEEEEECCCCC----------EEEEEEcCCCccccCCEEE--CCEEEEEeCCceEEEe
Confidence 4577888899999999987766 2211112222222111111 3468888999988765
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.04 Score=39.62 Aligned_cols=101 Identities=11% Similarity=0.173 Sum_probs=64.6
Q ss_pred CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCC----CeEEEeeCCCcEEEEecc
Q psy14817 6 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT----DLIATACGDDAIRIFKEN 81 (138)
Q Consensus 6 ~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~----~~~~s~~~d~~i~i~~~~ 81 (138)
-+||++...|.|.+||...... +..+.. |..++..++|-+.. ..++.-..-.++.+|+..
T Consensus 80 lliAsaD~~GrIil~d~~~~s~---------------~~~l~~-~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntd 143 (1062)
T KOG1912|consen 80 LLIASADISGRIILVDFVLASV---------------INWLSH-SNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTD 143 (1062)
T ss_pred eeEEeccccCcEEEEEehhhhh---------------hhhhcC-CCcchhheeeeeccCcchheeEEecCCcEEEEEEcc
Confidence 4688888999999999754322 334444 67788888887643 256665666789999988
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEE
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd 132 (138)
.++ ..=..........++.+.|-+.+.+..-+..|.+-+-+
T Consensus 144 tG~----------k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~ 184 (1062)
T KOG1912|consen 144 TGE----------KFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCK 184 (1062)
T ss_pred CCc----------eeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEe
Confidence 876 22111223345556777775466665555566655543
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0086 Score=43.34 Aligned_cols=66 Identities=14% Similarity=0.165 Sum_probs=51.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|+.-.|+.|=+-|.+.+|...+.. ..+....|..+|..+.|+++|..++++..=|.+.+|..
T Consensus 67 WHpe~~vLa~gwe~g~~~v~~~~~~e----------------~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~ 130 (1416)
T KOG3617|consen 67 WHPEEFVLAQGWEMGVSDVQKTNTTE----------------THTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRY 130 (1416)
T ss_pred cChHHHHHhhccccceeEEEecCCce----------------eeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEe
Confidence 45666667788788888888854321 34444458999999999999999999999999999987
Q ss_pred cC
Q psy14817 81 NP 82 (138)
Q Consensus 81 ~~ 82 (138)
..
T Consensus 131 d~ 132 (1416)
T KOG3617|consen 131 DV 132 (1416)
T ss_pred ee
Confidence 73
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.013 Score=39.63 Aligned_cols=102 Identities=9% Similarity=0.076 Sum_probs=61.0
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCC-------
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD------- 73 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~------- 73 (138)
+||.|.+|++... ..|.+|.-... ..+..+. ...|..+.|+|.+.+|.+=++.+
T Consensus 40 ~SP~G~~l~~~~~-~~V~~~~g~~~---------------~~l~~~~---~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e 100 (561)
T COG5354 40 ESPLGTYLFSEHA-AGVECWGGPSK---------------AKLVRFR---HPDVKYLDFSPNEKYLVTWSREPIIEPEIE 100 (561)
T ss_pred ecCcchheehhhc-cceEEccccch---------------hheeeee---cCCceecccCcccceeeeeccCCccChhhc
Confidence 5889999997654 67888884322 2233332 24688899999999988854443
Q ss_pred --------cEEEEeccCCCCCCceeeeeeeeeeecccccc--ee-EEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 74 --------AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQD--VN-CVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 74 --------~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~-~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
.+.+||...+. +...+.....+ .+ -++|+.+ ..+++-.. ...+.|+++
T Consensus 101 ~sp~~~~n~~~vwd~~sg~----------iv~sf~~~~q~~~~Wp~~k~s~~-D~y~ARvv-~~sl~i~e~ 159 (561)
T COG5354 101 ISPFTSKNNVFVWDIASGM----------IVFSFNGISQPYLGWPVLKFSID-DKYVARVV-GSSLYIHEI 159 (561)
T ss_pred cCCccccCceeEEeccCce----------eEeeccccCCcccccceeeeeec-chhhhhhc-cCeEEEEec
Confidence 38888888765 22222222222 34 4566666 55554442 234666664
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.081 Score=39.79 Aligned_cols=60 Identities=12% Similarity=0.176 Sum_probs=42.0
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
+++.++.+..+|.|.+-|..... +..+..+ ...|.+++|+|+++.++-.+..+++.+-+.
T Consensus 79 d~~~i~v~~~~G~iilvd~et~~-------------~eivg~v----d~GI~aaswS~Dee~l~liT~~~tll~mT~ 138 (1265)
T KOG1920|consen 79 DTNSICVITALGDIILVDPETLE-------------LEIVGNV----DNGISAASWSPDEELLALITGRQTLLFMTK 138 (1265)
T ss_pred ccceEEEEecCCcEEEEcccccc-------------eeeeeec----cCceEEEeecCCCcEEEEEeCCcEEEEEec
Confidence 45667777788888888753322 2333333 457999999999998888888777777644
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0025 Score=46.14 Aligned_cols=82 Identities=15% Similarity=0.169 Sum_probs=59.1
Q ss_pred EEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEE
Q psy14817 41 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA 120 (138)
Q Consensus 41 ~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 120 (138)
+....|.. |....+|++|+-+...++.|+..|.|+++++..+. -.....+|...|+.+.=+.+ +..++
T Consensus 1092 r~w~~frd-~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~----------~e~s~ncH~SavT~vePs~d-gs~~L 1159 (1516)
T KOG1832|consen 1092 RSWRSFRD-ETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGS----------MEESVNCHQSAVTLVEPSVD-GSTQL 1159 (1516)
T ss_pred ccchhhhc-cccceeeEEeecCCceEEeeeccceEEEEEccCcc----------ccccccccccccccccccCC-cceee
Confidence 44556666 78889999999999999999999999999999886 33334578888888776666 55444
Q ss_pred EEe-CCC-cEEEEEcC
Q psy14817 121 SCS-DDG-DVKLWQIK 134 (138)
Q Consensus 121 ~~~-~d~-~v~~wd~~ 134 (138)
+.+ ... ...+|++.
T Consensus 1160 tsss~S~PlsaLW~~~ 1175 (1516)
T KOG1832|consen 1160 TSSSSSSPLSALWDAS 1175 (1516)
T ss_pred eeccccCchHHHhccc
Confidence 333 322 45566653
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.031 Score=30.28 Aligned_cols=65 Identities=17% Similarity=0.241 Sum_probs=43.3
Q ss_pred eEEEEEec---CCC-eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEE
Q psy14817 54 IYDISWCH---LTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 129 (138)
Q Consensus 54 v~~v~~~~---~~~-~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~ 129 (138)
|+++++.. +|. .|+.|+.|..|++|+-.. ..... .....|+.+.-.. ...++.+-.+|+|-
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e------------~~~Ei-~e~~~v~~L~~~~--~~~F~Y~l~NGTVG 66 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDE------------IVAEI-TETDKVTSLCSLG--GGRFAYALANGTVG 66 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCCc------------EEEEE-ecccceEEEEEcC--CCEEEEEecCCEEE
Confidence 45555443 443 899999999999997553 22222 3456777776655 46688888888887
Q ss_pred EEEc
Q psy14817 130 LWQI 133 (138)
Q Consensus 130 ~wd~ 133 (138)
+|+-
T Consensus 67 vY~~ 70 (111)
T PF14783_consen 67 VYDR 70 (111)
T ss_pred EEeC
Confidence 7754
|
|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.13 Score=37.29 Aligned_cols=84 Identities=14% Similarity=0.181 Sum_probs=53.5
Q ss_pred ccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCC--------Cceeeeeeee--ee-ecccccceeEEEEccCC--CC
Q psy14817 51 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD--------SDMVSFDLVH--TE-HRAHNQDVNCVAWNPVV--PG 117 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~--------~~~~~~~~~~--~~-~~~~~~~v~~~~~~~~~--~~ 117 (138)
...|..|..+++|.+++-.+..+ |.|..+...-+. .......... .. .......|..+.|+|.. +.
T Consensus 84 ~f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~ 162 (717)
T PF10168_consen 84 LFEVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDS 162 (717)
T ss_pred ceeEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCC
Confidence 45789999999999888777765 444455432110 0111111110 11 12334688899999972 57
Q ss_pred EEEEEeCCCcEEEEEcCC
Q psy14817 118 MLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 118 ~l~~~~~d~~v~~wd~~~ 135 (138)
.|+.-..|+.+|+||+..
T Consensus 163 ~l~vLtsdn~lR~y~~~~ 180 (717)
T PF10168_consen 163 HLVVLTSDNTLRLYDISD 180 (717)
T ss_pred eEEEEecCCEEEEEecCC
Confidence 888889999999999864
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.064 Score=33.29 Aligned_cols=99 Identities=14% Similarity=0.087 Sum_probs=60.0
Q ss_pred CccCCCeE-EEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l-~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|+++.| ++-+..+.|..+++...... ....+....+.. ..+..-.+++..+|.+.++....+.|.+++
T Consensus 141 ~s~dg~~lyv~ds~~~~i~~~~~~~~~~~--------~~~~~~~~~~~~-~~g~pDG~~vD~~G~l~va~~~~~~I~~~~ 211 (246)
T PF08450_consen 141 FSPDGKTLYVADSFNGRIWRFDLDADGGE--------LSNRRVFIDFPG-GPGYPDGLAVDSDGNLWVADWGGGRIVVFD 211 (246)
T ss_dssp EETTSSEEEEEETTTTEEEEEEEETTTCC--------EEEEEEEEE-SS-SSCEEEEEEEBTTS-EEEEEETTTEEEEEE
T ss_pred ECCcchheeecccccceeEEEeccccccc--------eeeeeeEEEcCC-CCcCCCcceEcCCCCEEEEEcCCCEEEEEC
Confidence 57888755 56677888888887543220 111122333333 223477899999999888877888999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEc-cCCCCEEE
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN-PVVPGMLA 120 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~ 120 (138)
.+ +. ........ ...+++++|- ++ ...|+
T Consensus 212 p~-G~---------~~~~i~~p-~~~~t~~~fgg~~-~~~L~ 241 (246)
T PF08450_consen 212 PD-GK---------LLREIELP-VPRPTNCAFGGPD-GKTLY 241 (246)
T ss_dssp TT-SC---------EEEEEE-S-SSSEEEEEEESTT-SSEEE
T ss_pred CC-cc---------EEEEEcCC-CCCEEEEEEECCC-CCEEE
Confidence 87 43 12222223 3478899994 44 44443
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.11 Score=36.83 Aligned_cols=32 Identities=9% Similarity=0.069 Sum_probs=25.3
Q ss_pred ccceeEEEEccCCCCEEEEEe-CCCcEEEEEcCC
Q psy14817 103 NQDVNCVAWNPVVPGMLASCS-DDGDVKLWQIKL 135 (138)
Q Consensus 103 ~~~v~~~~~~~~~~~~l~~~~-~d~~v~~wd~~~ 135 (138)
....+.+.++|+ +.+++.++ .+.++.|.|+..
T Consensus 320 GKsPHGV~vSPD-GkylyVanklS~tVSVIDv~k 352 (635)
T PRK02888 320 PKNPHGVNTSPD-GKYFIANGKLSPTVTVIDVRK 352 (635)
T ss_pred CCCccceEECCC-CCEEEEeCCCCCcEEEEEChh
Confidence 456788999999 87766555 599999999865
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.061 Score=32.95 Aligned_cols=109 Identities=11% Similarity=0.042 Sum_probs=58.7
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
++..+++++.++.|..||.... +.+..+.. ...+.... ...+..++.+..++.+..+|...+
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG---------------~~~W~~~~--~~~~~~~~-~~~~~~v~v~~~~~~l~~~d~~tG 96 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTG---------------KVLWRFDL--PGPISGAP-VVDGGRVYVGTSDGSLYALDAKTG 96 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTS---------------EEEEEEEC--SSCGGSGE-EEETTEEEEEETTSEEEEEETTTS
T ss_pred eCCEEEEEcCCCEEEEEECCCC---------------CEEEEeec--ccccccee-eecccccccccceeeeEecccCCc
Confidence 5667777789999999996433 33333332 11111101 223455555567778999998776
Q ss_pred CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 84 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
. ..+........... ....+..... +..++.+..++.|..+|+++++
T Consensus 97 ~-----~~W~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~g~l~~~d~~tG~ 143 (238)
T PF13360_consen 97 K-----VLWSIYLTSSPPAG-VRSSSSPAVD-GDRLYVGTSSGKLVALDPKTGK 143 (238)
T ss_dssp C-----EEEEEEE-SSCTCS-TB--SEEEEE-TTEEEEEETCSEEEEEETTTTE
T ss_pred c-----eeeeeccccccccc-cccccCceEe-cCEEEEEeccCcEEEEecCCCc
Confidence 6 11110000000011 1112222223 6777888889999999988775
|
... |
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.19 Score=36.63 Aligned_cols=114 Identities=11% Similarity=0.139 Sum_probs=68.4
Q ss_pred CeEEEeeCCCc-----EEEeeccCCCCCCCccCCCCCCceEEe-----EEecC-CCccCeEEEEEecCCCeEEEeeCCCc
Q psy14817 6 SRLATCSDDAT-----VKIWKEYKPGNSAGIPTPDNDSVWKCV-----CTLSG-HHGRTIYDISWCHLTDLIATACGDDA 74 (138)
Q Consensus 6 ~~l~t~s~d~~-----v~iw~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~v~~v~~~~~~~~~~s~~~d~~ 74 (138)
++|++.++|+. ++||++.....-. .-.++ .++.. ....++.+++.+.+-..++.|-.+|.
T Consensus 78 ~~L~sv~Ed~~~np~llkiw~lek~~~n~---------sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~ 148 (933)
T KOG2114|consen 78 NFLFSVGEDEQGNPVLLKIWDLEKVDKNN---------SPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGL 148 (933)
T ss_pred eEEEEEeecCCCCceEEEEecccccCCCC---------CcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcE
Confidence 57788777665 8999986543211 01333 11111 02457888999998889999999999
Q ss_pred EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
|..+.=+....... ..........+|+.+.+..+ +..++.+..-..|.+|.+..
T Consensus 149 V~~~~GDi~RDrgs------r~~~~~~~~~pITgL~~~~d-~~s~lFv~Tt~~V~~y~l~g 202 (933)
T KOG2114|consen 149 VICYKGDILRDRGS------RQDYSHRGKEPITGLALRSD-GKSVLFVATTEQVMLYSLSG 202 (933)
T ss_pred EEEEcCcchhcccc------ceeeeccCCCCceeeEEecC-CceeEEEEecceeEEEEecC
Confidence 98884332221111 11122244679999999877 65533333344677776653
|
|
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.17 Score=35.98 Aligned_cols=103 Identities=10% Similarity=0.154 Sum_probs=59.6
Q ss_pred CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEe--cCCCeEEEeeCCCcEEEEeccCCCCCCcee
Q psy14817 13 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC--HLTDLIATACGDDAIRIFKENPEAGDSDMV 90 (138)
Q Consensus 13 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~--~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~ 90 (138)
....+.|||.+... .+.-..+. ..+.|.++.|. |+++.+++.+..+.|.++......-....+
T Consensus 49 ~~~~LtIWD~~~~~-------------lE~~~~f~--~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p 113 (631)
T PF12234_consen 49 SRSELTIWDTRSGV-------------LEYEESFS--EDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGP 113 (631)
T ss_pred CCCEEEEEEcCCcE-------------EEEeeeec--CCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCc
Confidence 34478899975432 12223332 36789999886 466788888888899998654221111112
Q ss_pred eeeeeeee-ecccc-cceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 91 SFDLVHTE-HRAHN-QDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 91 ~~~~~~~~-~~~~~-~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
.+..+... ...++ .+|.+..|.++ +..++.++ ..+.|+|-
T Consensus 114 ~w~~i~~i~i~~~T~h~Igds~Wl~~-G~LvV~sG--Nqlfv~dk 155 (631)
T PF12234_consen 114 SWAPIRKIDISSHTPHPIGDSIWLKD-GTLVVGSG--NQLFVFDK 155 (631)
T ss_pred ccceeEEEEeecCCCCCccceeEecC-CeEEEEeC--CEEEEECC
Confidence 12111111 11233 57899999987 66665443 45777653
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.076 Score=36.63 Aligned_cols=100 Identities=10% Similarity=-0.016 Sum_probs=58.7
Q ss_pred eeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCcee
Q psy14817 11 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMV 90 (138)
Q Consensus 11 ~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~ 90 (138)
|-.|..|.=||.+....- ...+..-+.+.. +....|.+-. ...+++.|+.+|.|++||-- +.
T Consensus 400 GLs~n~vfriDpRv~~~~--------kl~~~q~kqy~~--k~nFsc~aTT-~sG~IvvgS~~GdIRLYdri-~~------ 461 (644)
T KOG2395|consen 400 GLSDNSVFRIDPRVQGKN--------KLAVVQSKQYST--KNNFSCFATT-ESGYIVVGSLKGDIRLYDRI-GR------ 461 (644)
T ss_pred eecCCceEEecccccCcc--------eeeeeecccccc--ccccceeeec-CCceEEEeecCCcEEeehhh-hh------
Confidence 556778888887643220 111111112221 2344454432 33488999999999999873 32
Q ss_pred eeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 91 SFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 91 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
.....+.+-..+|..+..+.+ +.+++..+... +.+.+.
T Consensus 462 ---~AKTAlPgLG~~I~hVdvtad-GKwil~Tc~ty-LlLi~t 499 (644)
T KOG2395|consen 462 ---RAKTALPGLGDAIKHVDVTAD-GKWILATCKTY-LLLIDT 499 (644)
T ss_pred ---hhhhcccccCCceeeEEeecc-CcEEEEecccE-EEEEEE
Confidence 122333466779999999988 88887666544 545443
|
|
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.16 Score=34.36 Aligned_cols=42 Identities=12% Similarity=-0.040 Sum_probs=33.6
Q ss_pred EeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCC
Q psy14817 42 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 42 ~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
+...+.. ....+.++..+|.+.+.+....=|.|.++|+..+.
T Consensus 299 ~r~~l~D-~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~ 340 (415)
T PF14655_consen 299 MRFGLPD-SKREGESICLSPSGRLAAVTDSLGRVLLIDVARGI 340 (415)
T ss_pred eEEeecc-CCceEEEEEECCCCCEEEEEcCCCcEEEEECCCCh
Confidence 4445554 56678999999999888887777899999999876
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.005 Score=44.69 Aligned_cols=105 Identities=12% Similarity=0.127 Sum_probs=68.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCC--cEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD--AIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~--~i~i~ 78 (138)
||-+.+.|+.|+..|.|++++...... .....+ |..+|+.+.-+.+|..+++.+.-. ...+|
T Consensus 1109 fs~~~~hL~vG~~~Geik~~nv~sG~~---------------e~s~nc-H~SavT~vePs~dgs~~Ltsss~S~PlsaLW 1172 (1516)
T KOG1832|consen 1109 FSGGTNHLAVGSHAGEIKIFNVSSGSM---------------EESVNC-HQSAVTLVEPSVDGSTQLTSSSSSSPLSALW 1172 (1516)
T ss_pred eecCCceEEeeeccceEEEEEccCccc---------------cccccc-cccccccccccCCcceeeeeccccCchHHHh
Confidence 456678999999999999999866544 344566 889999999888998555544332 46789
Q ss_pred eccCCCCCCceeeeeeeeeeecccc-cceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHN-QDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
++....+ . .|. ..-.++.|+.. .+.-+.|+......+||+.+.
T Consensus 1173 ~~~s~~~---------~-----~Hsf~ed~~vkFsn~-~q~r~~gt~~d~a~~YDvqT~ 1216 (1516)
T KOG1832|consen 1173 DASSTGG---------P-----RHSFDEDKAVKFSNS-LQFRALGTEADDALLYDVQTC 1216 (1516)
T ss_pred ccccccC---------c-----cccccccceeehhhh-HHHHHhcccccceEEEecccC
Confidence 8874220 1 121 23345666655 444444444456777887765
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.17 Score=34.02 Aligned_cols=128 Identities=13% Similarity=0.120 Sum_probs=70.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCC--Ccc--------------------------CCCCCCceEEeEEecCCCcc
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSA--GIP--------------------------TPDNDSVWKCVCTLSGHHGR 52 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~--~~~--------------------------~~~~~~~~~~~~~~~~~~~~ 52 (138)
|+++..-|+.|...|.|-||......... ..+ .+.-.....+..-+.. .++
T Consensus 9 ~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~~~-~~g 87 (395)
T PF08596_consen 9 FAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLLDA-KQG 87 (395)
T ss_dssp EETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE----S-
T ss_pred ecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhheec-cCC
Confidence 34566678889999999999865432211 000 0011123455555555 578
Q ss_pred CeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeee--eecccccceeEEEEcc---C-CC---CEEEEEe
Q psy14817 53 TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHT--EHRAHNQDVNCVAWNP---V-VP---GMLASCS 123 (138)
Q Consensus 53 ~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~---~-~~---~~l~~~~ 123 (138)
+|++++.+ +-.+++.|..+|.+.|.|++... -... ..... ........++++.|.. . ++ -.++.|.
T Consensus 88 ~vtal~~S-~iGFvaigy~~G~l~viD~RGPa---vI~~-~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGT 162 (395)
T PF08596_consen 88 PVTALKNS-DIGFVAIGYESGSLVVIDLRGPA---VIYN-ENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGT 162 (395)
T ss_dssp SEEEEEE--BTSEEEEEETTSEEEEEETTTTE---EEEE-EEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEE
T ss_pred cEeEEecC-CCcEEEEEecCCcEEEEECCCCe---EEee-ccccccccccccccCeeEEEEEEEecCCCcccceEEEEEe
Confidence 99999975 56789999999999999997543 0000 00000 1112334677787752 1 12 3577888
Q ss_pred CCCcEEEEEcC
Q psy14817 124 DDGDVKLWQIK 134 (138)
Q Consensus 124 ~d~~v~~wd~~ 134 (138)
..|.+.+|.+-
T Consensus 163 n~G~v~~fkIl 173 (395)
T PF08596_consen 163 NSGNVLTFKIL 173 (395)
T ss_dssp TTSEEEEEEEE
T ss_pred CCCCEEEEEEe
Confidence 88999998763
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.25 Score=35.22 Aligned_cols=100 Identities=13% Similarity=0.211 Sum_probs=60.8
Q ss_pred CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeee
Q psy14817 15 ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 94 (138)
Q Consensus 15 ~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~ 94 (138)
|.|+.|..+-... .....|....++.. ......-+.-+..++..+.-+....+.|||.+.+. .
T Consensus 1 g~~~~~~a~v~~~-------~~~~~w~~t~~~~T-~i~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~---------l 63 (631)
T PF12234_consen 1 GRIRTWTARVDTE-------SNKIEWLLTSTFET-GISNPSLISGSSIKKIAVVDSSRSELTIWDTRSGV---------L 63 (631)
T ss_pred CeeEEEEEEEcCC-------CCeEEEEEEEEEec-CCCCcceEeecccCcEEEEECCCCEEEEEEcCCcE---------E
Confidence 4566676542211 12345555666655 44556666656545544443344469999998764 1
Q ss_pred eeeeecccccceeEEEEc--cCCCCEEEEEeCCCcEEEEE
Q psy14817 95 VHTEHRAHNQDVNCVAWN--PVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 95 ~~~~~~~~~~~v~~~~~~--~~~~~~l~~~~~d~~v~~wd 132 (138)
...........|.++.|. |+ ++.+++.+....|.++.
T Consensus 64 E~~~~f~~~~~I~dLDWtst~d-~qsiLaVGf~~~v~l~~ 102 (631)
T PF12234_consen 64 EYEESFSEDDPIRDLDWTSTPD-GQSILAVGFPHHVLLYT 102 (631)
T ss_pred EEeeeecCCCceeeceeeecCC-CCEEEEEEcCcEEEEEE
Confidence 111111456789999986 56 88888888888888874
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.063 Score=38.49 Aligned_cols=120 Identities=16% Similarity=0.189 Sum_probs=70.9
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCC-----ccCCCCCCceEEeEEecCCCccCeEEEEEe--cCCCeEEEeeCCCcEEE
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAG-----IPTPDNDSVWKCVCTLSGHHGRTIYDISWC--HLTDLIATACGDDAIRI 77 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~--~~~~~~~s~~~d~~i~i 77 (138)
...|+.|.+||.|.+|....-..... ..........+|...+.. ....++++++ ....++|.++....|.|
T Consensus 114 ~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v--~~SaWGLdIh~~~~~rlIAVSsNs~~VTV 191 (717)
T PF08728_consen 114 EEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRV--GASAWGLDIHDYKKSRLIAVSSNSQEVTV 191 (717)
T ss_pred eeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeec--CCceeEEEEEecCcceEEEEecCCceEEE
Confidence 35789999999999998632210000 000000011122233332 4578899988 66668888877777888
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEEEccCC--CC---EEEEEeCCCcEEEEEc
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV--PG---MLASCSDDGDVKLWQI 133 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~---~l~~~~~d~~v~~wd~ 133 (138)
|-+...... . .......+...|-+++|-++. +. .+++++-.|.+.+|++
T Consensus 192 Faf~l~~~r--~-----~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 192 FAFALVDER--F-----YHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EEEeccccc--c-----ccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 866542100 0 000011355678888887652 22 7788899999999887
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.19 Score=33.35 Aligned_cols=102 Identities=10% Similarity=0.071 Sum_probs=55.4
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
+..+..++.++.|..+|..... .+..... ......... .++..++.++.++.+..+|...++
T Consensus 65 ~~~v~v~~~~g~v~a~d~~tG~---------------~~W~~~~-~~~~~~~p~--v~~~~v~v~~~~g~l~ald~~tG~ 126 (377)
T TIGR03300 65 GGKVYAADADGTVVALDAETGK---------------RLWRVDL-DERLSGGVG--ADGGLVFVGTEKGEVIALDAEDGK 126 (377)
T ss_pred CCEEEEECCCCeEEEEEccCCc---------------EeeeecC-CCCcccceE--EcCCEEEEEcCCCEEEEEECCCCc
Confidence 4567777788888888854332 2332222 111111122 235667777888999999987765
Q ss_pred CCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 85 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.. ........+.+.-.. . +..++.++.++.+..+|.++++
T Consensus 127 ----------~~-W~~~~~~~~~~~p~v-~-~~~v~v~~~~g~l~a~d~~tG~ 166 (377)
T TIGR03300 127 ----------EL-WRAKLSSEVLSPPLV-A-NGLVVVRTNDGRLTALDAATGE 166 (377)
T ss_pred ----------Ee-eeeccCceeecCCEE-E-CCEEEEECCCCeEEEEEcCCCc
Confidence 11 000111111111001 2 4456667778889999987764
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.1 Score=33.31 Aligned_cols=54 Identities=13% Similarity=0.193 Sum_probs=38.0
Q ss_pred CccCCCeEEEeeC-----CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEe
Q psy14817 1 MIQTGSRLATCSD-----DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA 69 (138)
Q Consensus 1 ~s~~~~~l~t~s~-----d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~ 69 (138)
|||+|.+|...-. -|.|=|||.+.. .+.+.++.. |.-....+.|.+||..++.+
T Consensus 121 fs~dG~~LYATEndfd~~rGViGvYd~r~~--------------fqrvgE~~t-~GiGpHev~lm~DGrtlvva 179 (366)
T COG3490 121 FSPDGRLLYATENDFDPNRGVIGVYDAREG--------------FQRVGEFST-HGIGPHEVTLMADGRTLVVA 179 (366)
T ss_pred cCCCCcEEEeecCCCCCCCceEEEEecccc--------------cceeccccc-CCcCcceeEEecCCcEEEEe
Confidence 7899998876543 367889997532 234566666 66667788888888876654
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.06 Score=35.44 Aligned_cols=108 Identities=13% Similarity=0.094 Sum_probs=57.0
Q ss_pred ccCCCeEEEee---------CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCC
Q psy14817 2 IQTGSRLATCS---------DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 72 (138)
Q Consensus 2 s~~~~~l~t~s---------~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d 72 (138)
|||+++++... ..+.+.++|+.... +..+.. ....+....|+|+|..++-.. +
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~----------------~~~l~~-~~~~~~~~~~sP~g~~~~~v~-~ 62 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGE----------------ITPLTP-PPPKLQDAKWSPDGKYIAFVR-D 62 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTE----------------EEESS--EETTBSEEEE-SSSTEEEEEE-T
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCc----------------eEECcC-CccccccceeecCCCeeEEEe-c
Confidence 68888877642 34566677764321 223332 245778899999999877764 5
Q ss_pred CcEEEEeccCCCCCCceeeeeee--eeee--------ccc-ccceeEEEEccCCCCEEEEEeC-CCcEEEEE
Q psy14817 73 DAIRIFKENPEAGDSDMVSFDLV--HTEH--------RAH-NQDVNCVAWNPVVPGMLASCSD-DGDVKLWQ 132 (138)
Q Consensus 73 ~~i~i~~~~~~~~~~~~~~~~~~--~~~~--------~~~-~~~v~~~~~~~~~~~~l~~~~~-d~~v~~wd 132 (138)
+.|.+.+...+. ....+.- .... ... -..-..+-|+|+ ++.|+.... +..|+.+.
T Consensus 63 ~nly~~~~~~~~----~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd-~~~la~~~~d~~~v~~~~ 129 (353)
T PF00930_consen 63 NNLYLRDLATGQ----ETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPD-SKYLAFLRFDEREVPEYP 129 (353)
T ss_dssp TEEEEESSTTSE----EEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TT-SSEEEEEEEE-TTS-EEE
T ss_pred CceEEEECCCCC----eEEeccccceeEEcCccceeccccccccccceEECCC-CCEEEEEEECCcCCceEE
Confidence 678888776543 0000000 0000 000 123467889999 887766554 44455443
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.051 Score=24.08 Aligned_cols=31 Identities=13% Similarity=0.107 Sum_probs=24.9
Q ss_pred cCeEEEEEecCCC---eEEEeeCCCcEEEEeccC
Q psy14817 52 RTIYDISWCHLTD---LIATACGDDAIRIFKENP 82 (138)
Q Consensus 52 ~~v~~v~~~~~~~---~~~s~~~d~~i~i~~~~~ 82 (138)
+.+.+++|+|... +++-+-..+.+.++|++.
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 4688999997554 777777778999999985
|
It contains a characteristic DLL sequence motif. |
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.021 Score=42.17 Aligned_cols=66 Identities=15% Similarity=0.198 Sum_probs=49.3
Q ss_pred CCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 62 LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 62 ~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.+..++.|+..|.+...|....- ........-.++|++++|+.+ +..++.|-.+|.|.+||...++
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL---------~~~~~ne~v~~~Vtsvafn~d-g~~l~~G~~~G~V~v~D~~~~k 163 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNL---------GPLHQNERVQGPVTSVAFNQD-GSLLLAGLGDGHVTVWDMHRAK 163 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhccc---------chhhcCCccCCcceeeEecCC-CceeccccCCCcEEEEEccCCc
Confidence 45577888888888887776422 011222234579999999998 9999999999999999998754
|
|
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.19 Score=34.83 Aligned_cols=61 Identities=11% Similarity=0.173 Sum_probs=42.7
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 82 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~ 82 (138)
..+||.||.+|-||+||. .+.+ .-..+.+ -..+|..|..+.+|.++++.+.. .+.+-+...
T Consensus 441 sG~IvvgS~~GdIRLYdr-i~~~--------------AKTAlPg-LG~~I~hVdvtadGKwil~Tc~t-yLlLi~t~~ 501 (644)
T KOG2395|consen 441 SGYIVVGSLKGDIRLYDR-IGRR--------------AKTALPG-LGDAIKHVDVTADGKWILATCKT-YLLLIDTLI 501 (644)
T ss_pred CceEEEeecCCcEEeehh-hhhh--------------hhhcccc-cCCceeeEEeeccCcEEEEeccc-EEEEEEEec
Confidence 458999999999999995 1111 0123444 67899999999999988766544 555555553
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.19 Score=34.13 Aligned_cols=67 Identities=9% Similarity=0.096 Sum_probs=38.2
Q ss_pred eEEEEEecCCC-eEEEeeCCCcEEEE--eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEE-EeCCCcEE
Q psy14817 54 IYDISWCHLTD-LIATACGDDAIRIF--KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLAS-CSDDGDVK 129 (138)
Q Consensus 54 v~~v~~~~~~~-~~~s~~~d~~i~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~-~~~d~~v~ 129 (138)
-..-+|+|+|+ ++++...|+...|| |+.... ..+ +....+.-..=.|+|+ +..++. .+..|.-.
T Consensus 240 ~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~----------~~~-Lt~~~gi~~~Ps~spd-G~~ivf~Sdr~G~p~ 307 (425)
T COG0823 240 NGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKN----------LPR-LTNGFGINTSPSWSPD-GSKIVFTSDRGGRPQ 307 (425)
T ss_pred cCCccCCCCCCEEEEEECCCCCccEEEEcCCCCc----------cee-cccCCccccCccCCCC-CCEEEEEeCCCCCcc
Confidence 34567999998 56677778875555 444332 111 1122222225578999 776554 44566655
Q ss_pred EEE
Q psy14817 130 LWQ 132 (138)
Q Consensus 130 ~wd 132 (138)
||-
T Consensus 308 I~~ 310 (425)
T COG0823 308 IYL 310 (425)
T ss_pred eEE
Confidence 553
|
|
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.24 Score=31.31 Aligned_cols=64 Identities=6% Similarity=-0.059 Sum_probs=38.9
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
|.+++.|++.|.+.+-+...... +..+.....-.+ .-...+++..+..++.|+..+..|.+...
T Consensus 63 gdfVV~GCy~g~lYfl~~~tGs~---------------~w~f~~~~~vk~-~a~~d~~~glIycgshd~~~yalD~~~~~ 126 (354)
T KOG4649|consen 63 GDFVVLGCYSGGLYFLCVKTGSQ---------------IWNFVILETVKV-RAQCDFDGGLIYCGSHDGNFYALDPKTYG 126 (354)
T ss_pred CCEEEEEEccCcEEEEEecchhh---------------eeeeeehhhhcc-ceEEcCCCceEEEecCCCcEEEecccccc
Confidence 45566677777777666543321 222222011112 22347788999999999999999888654
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.43 Score=33.94 Aligned_cols=72 Identities=11% Similarity=0.126 Sum_probs=36.1
Q ss_pred eEEEEEecCCCeEEEeeCCCc-EEEEeccCCCCCCceeeeeeeeeeec-ccccceeEEEEccCCCCEEEEEeCCCcEEE
Q psy14817 54 IYDISWCHLTDLIATACGDDA-IRIFKENPEAGDSDMVSFDLVHTEHR-AHNQDVNCVAWNPVVPGMLASCSDDGDVKL 130 (138)
Q Consensus 54 v~~v~~~~~~~~~~s~~~d~~-i~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~ 130 (138)
...-.|+|+|..+........ +++.+..... .......-..... .....|..++|+|+ +..++... ++.|.+
T Consensus 399 ~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~g---ql~~~~vd~ge~~~~~~g~Issl~wSpD-G~RiA~i~-~g~v~V 472 (591)
T PRK13616 399 LTRPSWSLDADAVWVVVDGNTVVRVIRDPATG---QLARTPVDASAVASRVPGPISELQLSRD-GVRAAMII-GGKVYL 472 (591)
T ss_pred CCCceECCCCCceEEEecCcceEEEeccCCCc---eEEEEeccCchhhhccCCCcCeEEECCC-CCEEEEEE-CCEEEE
Confidence 677889999886666543212 2222211100 0000000000000 22457999999999 77666544 466655
|
|
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.48 Score=33.45 Aligned_cols=111 Identities=8% Similarity=0.125 Sum_probs=62.6
Q ss_pred eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeE--EecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCC
Q psy14817 7 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC--TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 7 ~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
-+.+......|.||.+.....+. ..+-+-+ .+.....---.++.|+|....++.-.....-.++++....
T Consensus 74 aLLAVQHkkhVtVWqL~~s~~e~--------~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~ 145 (671)
T PF15390_consen 74 ALLAVQHKKHVTVWQLCPSTTER--------NKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDS 145 (671)
T ss_pred ceEEEeccceEEEEEeccCcccc--------ccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCC
Confidence 45556778999999986443321 1111112 1211111122467899988877665555444555665443
Q ss_pred CCCceeeeeeeeeeecccccceeEEEEccCCCCEE-EEEeCCCcEEEEEcCC
Q psy14817 85 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGML-ASCSDDGDVKLWQIKL 135 (138)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~d~~v~~wd~~~ 135 (138)
......-...+.|.|.+|..| ++.| ++.+..-.-.+||--+
T Consensus 146 ---------srVkaDi~~~G~IhCACWT~D-G~RLVVAvGSsLHSyiWd~~q 187 (671)
T PF15390_consen 146 ---------SRVKADIKTSGLIHCACWTKD-GQRLVVAVGSSLHSYIWDSAQ 187 (671)
T ss_pred ---------ceEEEeccCCceEEEEEecCc-CCEEEEEeCCeEEEEEecCch
Confidence 112222245678999999999 6654 4445555577887543
|
|
| >PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.48 Score=33.25 Aligned_cols=75 Identities=13% Similarity=0.196 Sum_probs=39.7
Q ss_pred CCCeEEEeeCCCcEEEEeccCCCCCCceeeeee---------eeee-------ecccccceeEEEEcc----CCCCEEEE
Q psy14817 62 LTDLIATACGDDAIRIFKENPEAGDSDMVSFDL---------VHTE-------HRAHNQDVNCVAWNP----VVPGMLAS 121 (138)
Q Consensus 62 ~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~---------~~~~-------~~~~~~~v~~~~~~~----~~~~~l~~ 121 (138)
+...++.+..||.+................... .... ..........+++.. + ..++++
T Consensus 157 ~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~t 235 (547)
T PF11715_consen 157 SEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEIND-DTFLFT 235 (547)
T ss_dssp SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ET-TTEEEE
T ss_pred CCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCC-CCEEEE
Confidence 566777788899888777664110000000000 0000 001123445555555 4 789999
Q ss_pred EeCCCcEEEEEcCCCC
Q psy14817 122 CSDDGDVKLWQIKLEN 137 (138)
Q Consensus 122 ~~~d~~v~~wd~~~~~ 137 (138)
.+.|+.+|+||+.+++
T Consensus 236 l~~D~~LRiW~l~t~~ 251 (547)
T PF11715_consen 236 LSRDHTLRIWSLETGQ 251 (547)
T ss_dssp EETTSEEEEEETTTTC
T ss_pred EeCCCeEEEEECCCCe
Confidence 9999999999999875
|
The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A. |
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.22 Score=30.62 Aligned_cols=72 Identities=7% Similarity=0.037 Sum_probs=45.0
Q ss_pred EecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeec-------ccccceeEEEEccCCCCEEEEEeCCCcEEEE
Q psy14817 59 WCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR-------AHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 131 (138)
Q Consensus 59 ~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~w 131 (138)
+...+.++++.+.+|.+++||+...+...... .+..... .....|..+.+..+ |.-+++-+ +|....|
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~---Si~pll~~~~~~~~~~~~~i~~~~lt~~-G~PiV~ls-ng~~y~y 92 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPV---SIAPLLNSSPVSDKSSSPNITSCSLTSN-GVPIVTLS-NGDSYSY 92 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCc---cHHHHhcccccccCCCCCcEEEEEEcCC-CCEEEEEe-CCCEEEe
Confidence 34567889999999999999999875111110 0111111 24457788888866 66665554 5677888
Q ss_pred EcCC
Q psy14817 132 QIKL 135 (138)
Q Consensus 132 d~~~ 135 (138)
+..-
T Consensus 93 ~~~L 96 (219)
T PF07569_consen 93 SPDL 96 (219)
T ss_pred cccc
Confidence 7643
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.0081 Score=41.89 Aligned_cols=104 Identities=19% Similarity=0.341 Sum_probs=65.7
Q ss_pred CeEEEe----eCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 6 SRLATC----SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 6 ~~l~t~----s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
+.||.| -.|-.+.|||+...-... ...+.... + ......+++|-.+.+.+.+|.....+.++|++
T Consensus 116 n~LAagldkhrnds~~~Iwdi~s~ltvP-------ke~~~fs~---~-~l~gqns~cwlrd~klvlaGm~sr~~~ifdlR 184 (783)
T KOG1008|consen 116 NHLAAGLDKHRNDSSLKIWDINSLLTVP-------KESPLFSS---S-TLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLR 184 (783)
T ss_pred HHHHhhhhhhcccCCccceecccccCCC-------cccccccc---c-cccCccccccccCcchhhcccccchhhhhhhh
Confidence 445554 247789999976542200 11111111 1 22344588888888899999988899999999
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEE
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd 132 (138)
... .....-.+..+..+...|-.++++++-. |+.+.+||
T Consensus 185 qs~-----------~~~~svnTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD 223 (783)
T KOG1008|consen 185 QSL-----------DSVSSVNTKYVQGITVDPFSPNYFCSNS-DGDIAIWD 223 (783)
T ss_pred hhh-----------hhhhhhhhhhcccceecCCCCCceeccc-cCceeecc
Confidence 543 1111123446677777884377887766 99999999
|
|
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.14 Score=31.47 Aligned_cols=73 Identities=12% Similarity=0.039 Sum_probs=46.4
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEe-----cCCCccCeEEEEEecCCCeEEEeeCCCcEEE
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL-----SGHHGRTIYDISWCHLTDLIATACGDDAIRI 77 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i 77 (138)
.+++++++...+|.+++||+.......+... ..++... .. ....|..+.++.+|.-+++-+ +|....
T Consensus 20 ~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~S------i~pll~~~~~~~~~-~~~~i~~~~lt~~G~PiV~ls-ng~~y~ 91 (219)
T PF07569_consen 20 CNGSYLLAITSSGLLYVWNLKKGKAVLPPVS------IAPLLNSSPVSDKS-SSPNITSCSLTSNGVPIVTLS-NGDSYS 91 (219)
T ss_pred eCCCEEEEEeCCCeEEEEECCCCeeccCCcc------HHHHhcccccccCC-CCCcEEEEEEcCCCCEEEEEe-CCCEEE
Confidence 4688999999999999999876543222100 0001000 02 456788888888887666554 467888
Q ss_pred EeccCC
Q psy14817 78 FKENPE 83 (138)
Q Consensus 78 ~~~~~~ 83 (138)
|+..-+
T Consensus 92 y~~~L~ 97 (219)
T PF07569_consen 92 YSPDLG 97 (219)
T ss_pred eccccc
Confidence 877644
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.0061 Score=42.45 Aligned_cols=108 Identities=15% Similarity=0.258 Sum_probs=62.1
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCC-CeEEEeeCCCcEEEEe-cc
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIFK-EN 81 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~-~~~~s~~~d~~i~i~~-~~ 81 (138)
+.+++.+|...+.++++|++..... ...+ .+..+..+.+.|-. .++++- .|+.|.+|| .+
T Consensus 165 d~klvlaGm~sr~~~ifdlRqs~~~--------------~~sv---nTk~vqG~tVdp~~~nY~cs~-~dg~iAiwD~~r 226 (783)
T KOG1008|consen 165 DTKLVLAGMTSRSVHIFDLRQSLDS--------------VSSV---NTKYVQGITVDPFSPNYFCSN-SDGDIAIWDTYR 226 (783)
T ss_pred Ccchhhcccccchhhhhhhhhhhhh--------------hhhh---hhhhcccceecCCCCCceecc-ccCceeeccchh
Confidence 4456777877788888887643210 0111 13355677778844 466554 489999999 33
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-CCcEEEEEcC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-DGDVKLWQIK 134 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~v~~wd~~ 134 (138)
.-+ . .+.............+..++|+|.....+++... .++|+.+|++
T Consensus 227 nie-n----pl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 227 NIE-N----PLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred hhc-c----HHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 222 0 0000111111112358899999985556666665 4668888875
|
|
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.43 Score=31.01 Aligned_cols=102 Identities=10% Similarity=0.061 Sum_probs=61.9
Q ss_pred EEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCC
Q psy14817 8 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS 87 (138)
Q Consensus 8 l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~ 87 (138)
|+.+ .++.|.+|++.... .......+.. ...+.++... +.+++.|..-..+.++..+...
T Consensus 101 lv~~-~g~~l~v~~l~~~~------------~l~~~~~~~~--~~~i~sl~~~--~~~I~vgD~~~sv~~~~~~~~~--- 160 (321)
T PF03178_consen 101 LVVA-VGNKLYVYDLDNSK------------TLLKKAFYDS--PFYITSLSVF--KNYILVGDAMKSVSLLRYDEEN--- 160 (321)
T ss_dssp EEEE-ETTEEEEEEEETTS------------SEEEEEEE-B--SSSEEEEEEE--TTEEEEEESSSSEEEEEEETTT---
T ss_pred EEEe-ecCEEEEEEccCcc------------cchhhheecc--eEEEEEEecc--ccEEEEEEcccCEEEEEEEccC---
Confidence 4433 34899999986543 1233333332 2356666554 6689999888888888665422
Q ss_pred ceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 88 DMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
.......+ ......++++.+-++ ++.++.+..+|.+.++...
T Consensus 161 --~~l~~va~--d~~~~~v~~~~~l~d-~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 161 --NKLILVAR--DYQPRWVTAAEFLVD-EDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp --E-EEEEEE--ESS-BEEEEEEEE-S-SSEEEEEETTSEEEEEEE-
T ss_pred --CEEEEEEe--cCCCccEEEEEEecC-CcEEEEEcCCCeEEEEEEC
Confidence 01111111 123456888888877 5799999999999999875
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.46 Score=34.60 Aligned_cols=81 Identities=14% Similarity=0.252 Sum_probs=47.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccC-CCCCCCccCCCCCCceEEeE------EecCCCccCeEEEEEecCC---CeEEEee
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYK-PGNSAGIPTPDNDSVWKCVC------TLSGHHGRTIYDISWCHLT---DLIATAC 70 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~-~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~v~~v~~~~~~---~~~~s~~ 70 (138)
+||+|+++|-.+..|. .|-.+.. .........+ .....|.. .+...+...|..+.|+|.+ ..++.-.
T Consensus 92 ~n~~g~~lal~G~~~v-~V~~LP~r~g~~~~~~~g--~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l~vLt 168 (717)
T PF10168_consen 92 LNPTGSLLALVGPRGV-VVLELPRRWGKNGEFEDG--KKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHLVVLT 168 (717)
T ss_pred ECCCCCEEEEEcCCcE-EEEEeccccCccccccCC--CcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeEEEEe
Confidence 4789999998887554 4444422 2211111111 11111111 1112235678899999985 5888888
Q ss_pred CCCcEEEEeccCCC
Q psy14817 71 GDDAIRIFKENPEA 84 (138)
Q Consensus 71 ~d~~i~i~~~~~~~ 84 (138)
.|+++++||+....
T Consensus 169 sdn~lR~y~~~~~~ 182 (717)
T PF10168_consen 169 SDNTLRLYDISDPQ 182 (717)
T ss_pred cCCEEEEEecCCCC
Confidence 99999999997544
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.84 Score=34.89 Aligned_cols=70 Identities=11% Similarity=0.175 Sum_probs=54.6
Q ss_pred ccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEE
Q psy14817 51 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKL 130 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~ 130 (138)
...|.++.|..+...++.+...|.|.+.|..... . .....-...|.+++|+|+ .+.++..+..+++.+
T Consensus 68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~----------~-eivg~vd~GI~aaswS~D-ee~l~liT~~~tll~ 135 (1265)
T KOG1920|consen 68 DDEIVSVQFLADTNSICVITALGDIILVDPETLE----------L-EIVGNVDNGISAASWSPD-EELLALITGRQTLLF 135 (1265)
T ss_pred CcceEEEEEecccceEEEEecCCcEEEEcccccc----------e-eeeeeccCceEEEeecCC-CcEEEEEeCCcEEEE
Confidence 4689999999999888888889999988776543 1 111234578999999999 999988888888877
Q ss_pred EE
Q psy14817 131 WQ 132 (138)
Q Consensus 131 wd 132 (138)
.+
T Consensus 136 mT 137 (1265)
T KOG1920|consen 136 MT 137 (1265)
T ss_pred Ee
Confidence 64
|
|
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.7 Score=31.72 Aligned_cols=57 Identities=14% Similarity=0.251 Sum_probs=33.4
Q ss_pred CCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 63 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 63 ~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
|.+|+..+.+ .|.+||..... ..+.. .-..|..+-|+++ +.+++..+.+ .+.+++.+
T Consensus 117 G~LL~~~~~~-~i~~yDw~~~~----------~i~~i--~v~~vk~V~Ws~~-g~~val~t~~-~i~il~~~ 173 (443)
T PF04053_consen 117 GNLLGVKSSD-FICFYDWETGK----------LIRRI--DVSAVKYVIWSDD-GELVALVTKD-SIYILKYN 173 (443)
T ss_dssp SSSEEEEETT-EEEEE-TTT------------EEEEE--SS-E-EEEEE-TT-SSEEEEE-S--SEEEEEE-
T ss_pred CcEEEEECCC-CEEEEEhhHcc----------eeeEE--ecCCCcEEEEECC-CCEEEEEeCC-eEEEEEec
Confidence 6666655544 79999998766 33322 1224889999999 9999888866 57776643
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.57 Score=30.40 Aligned_cols=101 Identities=14% Similarity=0.164 Sum_probs=51.7
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
+++|+++++++......-|+.- ...|++.... -...|..+.|.|++.+.+.+ ..+.|+.=+..
T Consensus 153 ~~dG~~vavs~~G~~~~s~~~G-------------~~~w~~~~r~---~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~ 215 (302)
T PF14870_consen 153 SSDGRYVAVSSRGNFYSSWDPG-------------QTTWQPHNRN---SSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDP 215 (302)
T ss_dssp -TTS-EEEEETTSSEEEEE-TT--------------SS-EEEE-----SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-T
T ss_pred CCCCcEEEEECcccEEEEecCC-------------CccceEEccC---ccceehhceecCCCCEEEEe-CCcEEEEccCC
Confidence 5788888888776666778731 2345655543 24689999999998765544 77778776622
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD 125 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 125 (138)
. ....+.............+..++|.++ ....++|+..
T Consensus 216 ~-----~~~~w~~~~~~~~~~~~~~ld~a~~~~-~~~wa~gg~G 253 (302)
T PF14870_consen 216 D-----DGETWSEPIIPIKTNGYGILDLAYRPP-NEIWAVGGSG 253 (302)
T ss_dssp T-----EEEEE---B-TTSS--S-EEEEEESSS-S-EEEEESTT
T ss_pred C-----CccccccccCCcccCceeeEEEEecCC-CCEEEEeCCc
Confidence 1 111111111111123345889999987 7777666543
|
|
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.71 Score=31.37 Aligned_cols=95 Identities=20% Similarity=0.252 Sum_probs=54.4
Q ss_pred CccCCCeEEEeeCCCcEEE---eeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC-----------CCeE
Q psy14817 1 MIQTGSRLATCSDDATVKI---WKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL-----------TDLI 66 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~i---w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~-----------~~~~ 66 (138)
.+|++..||.+..+..+.+ |+........ ..........+.....+.|+++.+-|- ...+
T Consensus 9 ls~~~d~laiA~~~r~vil~~~w~~~~~~~~~------~~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I 82 (415)
T PF14655_consen 9 LSPDGDLLAIARGQRLVILTSKWDSSRKGENE------NTYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCI 82 (415)
T ss_pred ecCCCCEEEEEcCCEEEEEEeeccccccCCCC------CeEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEE
Confidence 4789999999988887776 5432111100 011111122222211246666665443 4578
Q ss_pred EEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEc
Q psy14817 67 ATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN 112 (138)
Q Consensus 67 ~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 112 (138)
+.|..+|.|++|..... ......-|..+|..++..
T Consensus 83 ~VG~ssG~vrfyte~G~-----------LL~~Q~~h~~pV~~ik~~ 117 (415)
T PF14655_consen 83 AVGTSSGYVRFYTENGV-----------LLLSQLLHEEPVLKIKCR 117 (415)
T ss_pred EEEecccEEEEEeccch-----------HHHHHhcCccceEEEEec
Confidence 99999999999977532 122223467788877764
|
|
| >PF14761 HPS3_N: Hermansky-Pudlak syndrome 3 | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.58 Score=28.67 Aligned_cols=113 Identities=17% Similarity=0.311 Sum_probs=63.1
Q ss_pred CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCC---C---cEEEE-
Q psy14817 6 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD---D---AIRIF- 78 (138)
Q Consensus 6 ~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d---~---~i~i~- 78 (138)
..|..+...+.|.+|++..... +++..+.. -+.|..+.++..|.++++--.+ . .+++|
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~-------------~~~~~F~T--v~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~ 93 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEEC-------------PLLCTFST--VGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYF 93 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCC-------------ceeEEEcc--hhheeEEEeccccceEEEEEeecCCccceEEEEEE
Confidence 3343335567899999863322 44666665 5789999999999999885322 2 55665
Q ss_pred --eccCCCCCC--------------ceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 79 --KENPEAGDS--------------DMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 79 --~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
......... .........-...+-...+.+++-.|..|++++.. ++++.+|.++.
T Consensus 94 NWr~~~~~~~~v~vRiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~--~~~l~lf~l~~ 164 (215)
T PF14761_consen 94 NWRSQKEENSPVRVRIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGC--GNKLVLFTLKY 164 (215)
T ss_pred EhhhhcccCCcEEEEEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEc--CCEEEEEEEEE
Confidence 222111000 00000000011112345778888888756655443 45788887654
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=94.58 E-value=1.2 Score=31.92 Aligned_cols=77 Identities=6% Similarity=0.069 Sum_probs=41.3
Q ss_pred ccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEE
Q psy14817 51 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKL 130 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~ 130 (138)
.+.|..++|+|||..++... ++.|.+=-+..... ..............-...+..+.|..+ +.++ .+..++.-.+
T Consensus 447 ~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~--G~~~l~~~~~l~~~l~~~~~~l~W~~~-~~L~-V~~~~~~~~v 521 (591)
T PRK13616 447 PGPISELQLSRDGVRAAMII-GGKVYLAVVEQTED--GQYALTNPREVGPGLGDTAVSLDWRTG-DSLV-VGRSDPEHPV 521 (591)
T ss_pred CCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCC--CceeecccEEeecccCCccccceEecC-CEEE-EEecCCCCce
Confidence 45799999999999666554 46676633332211 111111111122223334678899987 6644 4444444445
Q ss_pred EE
Q psy14817 131 WQ 132 (138)
Q Consensus 131 wd 132 (138)
|.
T Consensus 522 ~~ 523 (591)
T PRK13616 522 WY 523 (591)
T ss_pred EE
Confidence 54
|
|
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=94.33 E-value=0.16 Score=38.28 Aligned_cols=104 Identities=13% Similarity=0.059 Sum_probs=66.0
Q ss_pred eCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC--CCccCeEEEEEecCCC-eEEEeeCCCcEEEEeccCCCCCCc
Q psy14817 12 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG--HHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSD 88 (138)
Q Consensus 12 s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~~~~ 88 (138)
+.+..|..||++.-...... ..+++..-.. .......++.|+|.-. ..+....|+.|++..+....
T Consensus 121 sng~~v~~fD~~~fs~s~~~-------~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~---- 189 (1405)
T KOG3630|consen 121 SNGEAVYSFDLEEFSESRYE-------TTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLA---- 189 (1405)
T ss_pred cCCceEEEEehHhhhhhhhh-------hccccccccchhccccccccccccCCccchhhhhccccchhhhhhhhhh----
Confidence 44558888998654332210 0111211111 0234567899999877 56667789999988776543
Q ss_pred eeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 89 MVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 89 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
.......-....++++|+|. +..++.|-..|++.-|-.
T Consensus 190 ------~~v~s~p~t~~~Tav~WSpr-GKQl~iG~nnGt~vQy~P 227 (1405)
T KOG3630|consen 190 ------QNVTSFPVTNSQTAVLWSPR-GKQLFIGRNNGTEVQYEP 227 (1405)
T ss_pred ------hhhcccCcccceeeEEeccc-cceeeEecCCCeEEEeec
Confidence 11111244567899999999 999999999999887743
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.93 Score=29.44 Aligned_cols=97 Identities=10% Similarity=-0.023 Sum_probs=56.0
Q ss_pred cc-CCCeEEEeeCCC-cEEEeeccCCCCCCCccCCCCCCceEEeEEecCC-CccCeEEEEEecCCCeEEEee-----CCC
Q psy14817 2 IQ-TGSRLATCSDDA-TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGRTIYDISWCHLTDLIATAC-----GDD 73 (138)
Q Consensus 2 s~-~~~~l~t~s~d~-~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~s~~-----~d~ 73 (138)
+| .+..++-+-.-| ...+||.+.... ...+... .....-.-.|+++|.+|++.- ..|
T Consensus 13 ~p~~~~avafaRRPG~~~~v~D~~~g~~---------------~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G 77 (305)
T PF07433_consen 13 HPTRPEAVAFARRPGTFALVFDCRTGQL---------------LQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRG 77 (305)
T ss_pred CCCCCeEEEEEeCCCcEEEEEEcCCCce---------------eeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcE
Confidence 45 445666666666 455688755433 2222220 111223467999999887753 346
Q ss_pred cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe
Q psy14817 74 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 123 (138)
Q Consensus 74 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 123 (138)
.|-|||....- .....+..+.-....+.+.|+ +..|+.+.
T Consensus 78 ~IgVyd~~~~~---------~ri~E~~s~GIGPHel~l~pD-G~tLvVAN 117 (305)
T PF07433_consen 78 VIGVYDAARGY---------RRIGEFPSHGIGPHELLLMPD-GETLVVAN 117 (305)
T ss_pred EEEEEECcCCc---------EEEeEecCCCcChhhEEEcCC-CCEEEEEc
Confidence 79999998332 123333345555667778888 76666653
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.19 Score=30.89 Aligned_cols=63 Identities=11% Similarity=0.120 Sum_probs=40.2
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCc-cCeEEEEEecCCCeEEEe--eCCCcEEEEecc
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG-RTIYDISWCHLTDLIATA--CGDDAIRIFKEN 81 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~v~~~~~~~~~~s~--~~d~~i~i~~~~ 81 (138)
+.+..+++.|+.||.|+.... +.+.. .++|. .++........+..+..+ +.|..++.|++.
T Consensus 114 ~~~~c~~~~dg~ir~~n~~p~---------------k~~g~-~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve 177 (238)
T KOG2444|consen 114 SSLGCVGAQDGRIRACNIKPN---------------KVLGY-VGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVE 177 (238)
T ss_pred cceeEEeccCCceeeeccccC---------------ceeee-eccccCCCcceeEEecCCceEEeeccccchhhhhcchh
Confidence 457888999999999996332 22222 23355 455555555556666666 677778888776
Q ss_pred CC
Q psy14817 82 PE 83 (138)
Q Consensus 82 ~~ 83 (138)
..
T Consensus 178 ~~ 179 (238)
T KOG2444|consen 178 KI 179 (238)
T ss_pred hh
Confidence 54
|
|
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=94.14 E-value=0.076 Score=39.03 Aligned_cols=71 Identities=27% Similarity=0.427 Sum_probs=45.7
Q ss_pred ccCeEEEEEecC---CCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEE-----------EEccCCC
Q psy14817 51 GRTIYDISWCHL---TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV-----------AWNPVVP 116 (138)
Q Consensus 51 ~~~v~~v~~~~~---~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-----------~~~~~~~ 116 (138)
...+.-|.|+|- .-++..+-.++.+++....... ...+..|...+..+ ..+|| +
T Consensus 180 gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~-----------~~l~rsHs~~~~d~a~~~~g~~~l~~lSpD-G 247 (1283)
T KOG1916|consen 180 GSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRAL-----------RSLFRSHSQRVTDMAFFAEGVLKLASLSPD-G 247 (1283)
T ss_pred CCCcceeeecccccccceeeeccCCCceeEeeechHH-----------HHHHHhcCCCcccHHHHhhchhhheeeCCC-C
Confidence 344555666663 3466667777888877665433 12223344443333 25788 9
Q ss_pred CEEEEEeCCCcEEEEEc
Q psy14817 117 GMLASCSDDGDVKLWQI 133 (138)
Q Consensus 117 ~~l~~~~~d~~v~~wd~ 133 (138)
..++.++.||.+++|.+
T Consensus 248 tv~a~a~~dG~v~f~Qi 264 (1283)
T KOG1916|consen 248 TVFAWAISDGSVGFYQI 264 (1283)
T ss_pred cEEEEeecCCccceeee
Confidence 99999999999999976
|
|
| >PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates | Back alignment and domain information |
|---|
Probab=93.80 E-value=0.16 Score=35.49 Aligned_cols=32 Identities=13% Similarity=0.166 Sum_probs=23.9
Q ss_pred CeEEEEEec----CCCeEEEeeCCCcEEEEeccCCC
Q psy14817 53 TIYDISWCH----LTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 53 ~v~~v~~~~----~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
....+.+.. +..++++.+.|+++|+||+....
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~ 251 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQ 251 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSEEEEEETTTTC
T ss_pred ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCe
Confidence 445555555 55699999999999999999876
|
The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A. |
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=93.71 E-value=0.15 Score=37.58 Aligned_cols=25 Identities=20% Similarity=0.344 Sum_probs=22.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCC
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKP 25 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~ 25 (138)
+||||..||+++.||.++.|.+.-.
T Consensus 243 lSpDGtv~a~a~~dG~v~f~Qiyi~ 267 (1283)
T KOG1916|consen 243 LSPDGTVFAWAISDGSVGFYQIYIT 267 (1283)
T ss_pred eCCCCcEEEEeecCCccceeeeeee
Confidence 4899999999999999999997543
|
|
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=93.43 E-value=2 Score=31.38 Aligned_cols=126 Identities=11% Similarity=0.089 Sum_probs=66.2
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCc----cC---CCCC-CceEEeEEecCCCccCeEEEEEecCC--CeEEEeeCCCc
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGI----PT---PDND-SVWKCVCTLSGHHGRTIYDISWCHLT--DLIATACGDDA 74 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~----~~---~~~~-~~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~s~~~d~~ 74 (138)
.++++.+. .+.|.||++......... .. +... ..-....... -...|+.|....-+ ..|+.+.+||.
T Consensus 49 ~n~LFiA~-~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p--~PHtIN~i~v~~lg~~EVLl~c~DdG~ 125 (717)
T PF08728_consen 49 RNLLFIAY-QSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWP--FPHTINFIKVGDLGGEEVLLLCTDDGD 125 (717)
T ss_pred CCEEEEEE-CCEEEEEecCCcccccccccccccccCccccccccccccCCC--CCceeeEEEecccCCeeEEEEEecCCe
Confidence 45566654 689999997654332110 00 0000 0000111111 12357777666555 38899999999
Q ss_pred EEEEeccCCC-------CCCcee--eeeeeeeeecccccceeEEEEc--cCCCCEEEEEeCCCcEEEEEcC
Q psy14817 75 IRIFKENPEA-------GDSDMV--SFDLVHTEHRAHNQDVNCVAWN--PVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 75 i~i~~~~~~~-------~~~~~~--~~~~~~~~~~~~~~~v~~~~~~--~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
|.+|....-. ...... ...........-...+|+++++ .. .+++|.++....|.||-+.
T Consensus 126 V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~-~rlIAVSsNs~~VTVFaf~ 195 (717)
T PF08728_consen 126 VLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKK-SRLIAVSSNSQEVTVFAFA 195 (717)
T ss_pred EEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCc-ceEEEEecCCceEEEEEEe
Confidence 9999664211 000000 0000000111234588999998 65 7778888777888887543
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=93.28 E-value=1.9 Score=29.76 Aligned_cols=59 Identities=24% Similarity=0.273 Sum_probs=33.1
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
|.+|+..+.+ .|.+||... .+.+..+.. ..|..|.|++++.+++-.+.+ .+.+++....
T Consensus 117 G~LL~~~~~~-~i~~yDw~~---------------~~~i~~i~v---~~vk~V~Ws~~g~~val~t~~-~i~il~~~~~ 175 (443)
T PF04053_consen 117 GNLLGVKSSD-FICFYDWET---------------GKLIRRIDV---SAVKYVIWSDDGELVALVTKD-SIYILKYNLE 175 (443)
T ss_dssp SSSEEEEETT-EEEEE-TTT-----------------EEEEESS----E-EEEEE-TTSSEEEEE-S--SEEEEEE-HH
T ss_pred CcEEEEECCC-CEEEEEhhH---------------cceeeEEec---CCCcEEEEECCCCEEEEEeCC-eEEEEEecch
Confidence 4555555443 677777532 245666654 248999999999988888765 5777665543
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=93.27 E-value=1.4 Score=28.44 Aligned_cols=118 Identities=10% Similarity=0.112 Sum_probs=64.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|+.+.|++......-.|+=.. .+..+.++.-..-...-.|.|...+++.++--.+..+.++.+
T Consensus 93 ynp~~rtLFav~n~p~~iVElt~---------------~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~v 157 (316)
T COG3204 93 YNPDTRTLFAVTNKPAAIVELTK---------------EGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTV 157 (316)
T ss_pred eCCCcceEEEecCCCceEEEEec---------------CCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEE
Confidence 57777777766666655555421 123344443322234456777766777777777888888887
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
..........................-.++|.|. ...|..+-.-.-+.|+...
T Consensus 158 d~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~-~~~l~~aKEr~P~~I~~~~ 210 (316)
T COG3204 158 DADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPV-DHRLFVAKERNPIGIFEVT 210 (316)
T ss_pred cCCccEEeccceEEeccccCCCCcCceeeecCCC-CceEEEEEccCCcEEEEEe
Confidence 7654221111111222222122456778899998 6666555555556666544
|
|
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=92.87 E-value=1.6 Score=27.88 Aligned_cols=62 Identities=13% Similarity=0.109 Sum_probs=42.5
Q ss_pred CCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeeccccccee-EEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 63 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVN-CVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 63 ~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|.+++.|+..|.+++.+...++ ..-.+ .....|. .....++ +..+..+++|+.....|+++.
T Consensus 63 gdfVV~GCy~g~lYfl~~~tGs----------~~w~f-~~~~~vk~~a~~d~~-~glIycgshd~~~yalD~~~~ 125 (354)
T KOG4649|consen 63 GDFVVLGCYSGGLYFLCVKTGS----------QIWNF-VILETVKVRAQCDFD-GGLIYCGSHDGNFYALDPKTY 125 (354)
T ss_pred CCEEEEEEccCcEEEEEecchh----------heeee-eehhhhccceEEcCC-CceEEEecCCCcEEEeccccc
Confidence 6678999999999999998875 11111 0111122 1233456 889999999999999998765
|
|
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=92.52 E-value=0.44 Score=36.21 Aligned_cols=63 Identities=13% Similarity=0.154 Sum_probs=42.2
Q ss_pred ccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEE
Q psy14817 51 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLAS 121 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 121 (138)
....++++|+|.|..++.|-..|++.-|...... .. .+..........|.++.|-.. ..+++.
T Consensus 198 t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~lei-k~------~ip~Pp~~e~yrvl~v~Wl~t-~eflvv 260 (1405)
T KOG3630|consen 198 TNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEI-KS------EIPEPPVEENYRVLSVTWLST-QEFLVV 260 (1405)
T ss_pred ccceeeEEeccccceeeEecCCCeEEEeecccce-ee------cccCCCcCCCcceeEEEEecc-eeEEEE
Confidence 5678999999999999999999998887655331 00 011111122468899999876 555543
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=92.41 E-value=2.9 Score=29.74 Aligned_cols=22 Identities=0% Similarity=-0.065 Sum_probs=16.6
Q ss_pred CCEEEEEeCCC--cEEEEEcCCCC
Q psy14817 116 PGMLASCSDDG--DVKLWQIKLEN 137 (138)
Q Consensus 116 ~~~l~~~~~d~--~v~~wd~~~~~ 137 (138)
+.+.+.|+.|+ .+..||..+.+
T Consensus 513 ~~iyv~Gg~~~~~~~e~yd~~~~~ 536 (557)
T PHA02713 513 NTIMMLHCYESYMLQDTFNVYTYE 536 (557)
T ss_pred CEEEEEeeecceeehhhcCccccc
Confidence 77888888888 67777776653
|
|
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=92.13 E-value=2 Score=27.17 Aligned_cols=62 Identities=16% Similarity=0.232 Sum_probs=42.1
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
.++.|+.|.++| +.+++...... ..... +...|..+...++-..++.-+ |+.+.++++...
T Consensus 6 ~~~~L~vGt~~G-l~~~~~~~~~~--------------~~~i~---~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l 66 (275)
T PF00780_consen 6 WGDRLLVGTEDG-LYVYDLSDPSK--------------PTRIL---KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSL 66 (275)
T ss_pred CCCEEEEEECCC-EEEEEecCCcc--------------ceeEe---ecceEEEEEEecccCEEEEEc-CCccEEEEchhh
Confidence 467889999988 88888722111 11111 233488899888888666654 489999999865
Q ss_pred C
Q psy14817 84 A 84 (138)
Q Consensus 84 ~ 84 (138)
.
T Consensus 67 ~ 67 (275)
T PF00780_consen 67 E 67 (275)
T ss_pred c
Confidence 5
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=92.07 E-value=2.1 Score=30.46 Aligned_cols=34 Identities=15% Similarity=0.165 Sum_probs=24.2
Q ss_pred CccCeEEEEEecCCCeEEEeeC-CCcEEEEeccCC
Q psy14817 50 HGRTIYDISWCHLTDLIATACG-DDAIRIFKENPE 83 (138)
Q Consensus 50 ~~~~v~~v~~~~~~~~~~s~~~-d~~i~i~~~~~~ 83 (138)
..+.|.|.+|.+||+.++.+-. .=.-++||-...
T Consensus 154 ~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~qK 188 (671)
T PF15390_consen 154 TSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQK 188 (671)
T ss_pred CCceEEEEEecCcCCEEEEEeCCeEEEEEecCchh
Confidence 3688999999999996655433 334678876644
|
|
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=91.72 E-value=3 Score=28.43 Aligned_cols=49 Identities=14% Similarity=0.298 Sum_probs=33.1
Q ss_pred cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 74 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 74 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
.|.+|+..... ........ +.+.++.|..+ ..|+....||.++++|+..
T Consensus 62 ~I~iys~sG~l----------l~~i~w~~-~~iv~~~wt~~--e~LvvV~~dG~v~vy~~~G 110 (410)
T PF04841_consen 62 SIQIYSSSGKL----------LSSIPWDS-GRIVGMGWTDD--EELVVVQSDGTVRVYDLFG 110 (410)
T ss_pred EEEEECCCCCE----------eEEEEECC-CCEEEEEECCC--CeEEEEEcCCEEEEEeCCC
Confidence 47777766432 22222223 78999999775 5566777899999999863
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=91.61 E-value=2.8 Score=27.81 Aligned_cols=34 Identities=15% Similarity=0.256 Sum_probs=24.0
Q ss_pred cceeEEEEccCCCCEEEEEe-CCCcEEEEEcCCCC
Q psy14817 104 QDVNCVAWNPVVPGMLASCS-DDGDVKLWQIKLEN 137 (138)
Q Consensus 104 ~~v~~~~~~~~~~~~l~~~~-~d~~v~~wd~~~~~ 137 (138)
..+.+|..+.+....|+..+ .++.+.+||..+++
T Consensus 289 ~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk 323 (342)
T PF06433_consen 289 HPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGK 323 (342)
T ss_dssp EEESEEEEESSSS-EEEEEETTTTEEEEEETTT--
T ss_pred CccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCc
Confidence 45778888887555776554 57899999998876
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=91.57 E-value=3.6 Score=29.09 Aligned_cols=84 Identities=10% Similarity=0.125 Sum_probs=49.4
Q ss_pred cCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCC-----Cceeeeeee-----eeeec-ccccceeEEEEccCC--CCE
Q psy14817 52 RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD-----SDMVSFDLV-----HTEHR-AHNQDVNCVAWNPVV--PGM 118 (138)
Q Consensus 52 ~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~-----~~~~~~~~~-----~~~~~-~~~~~v~~~~~~~~~--~~~ 118 (138)
-.|..|..++.|...+-.+.+|.+.++ +...-++ .+.....+. ..++. ...-.+...+|+|+. ...
T Consensus 104 feV~~vl~s~~GS~VaL~G~~Gi~vMe-Lp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~h 182 (741)
T KOG4460|consen 104 FEVYQVLLSPTGSHVALIGIKGLMVME-LPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPH 182 (741)
T ss_pred EEEEEEEecCCCceEEEecCCeeEEEE-chhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCce
Confidence 356778889999977777788865554 3211100 111111111 11111 112345667899984 467
Q ss_pred EEEEeCCCcEEEEEcCCC
Q psy14817 119 LASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 119 l~~~~~d~~v~~wd~~~~ 136 (138)
|..-..|..+|+||+...
T Consensus 183 L~iL~sdnviRiy~lS~~ 200 (741)
T KOG4460|consen 183 LVLLTSDNVIRIYSLSEP 200 (741)
T ss_pred EEEEecCcEEEEEecCCc
Confidence 888888999999998653
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=91.54 E-value=2.3 Score=26.83 Aligned_cols=117 Identities=10% Similarity=0.074 Sum_probs=61.6
Q ss_pred CccCC-CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~-~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|.|+. .++++....+.|...+.. .+.+..+.....+..-.|.+..++.++++.-.++.+.+++
T Consensus 29 y~pd~~tLfaV~d~~~~i~els~~----------------G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~ 92 (248)
T PF06977_consen 29 YNPDTGTLFAVQDEPGEIYELSLD----------------GKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFT 92 (248)
T ss_dssp EETTTTEEEEEETTTTEEEEEETT------------------EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEE
T ss_pred EcCCCCeEEEEECCCCEEEEEcCC----------------CCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEE
Confidence 35654 466666677777666642 1234444332246788898887676666665688899998
Q ss_pred ccCCCCCCceeeeee-eeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 80 ENPEAGDSDMVSFDL-VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
+.............. .......+...+-.++|.|. .+.|+.+-...-..++.++
T Consensus 93 ~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~-~~~L~v~kE~~P~~l~~~~ 147 (248)
T PF06977_consen 93 IDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPK-TNRLFVAKERKPKRLYEVN 147 (248)
T ss_dssp E----TT--EEEEEEEE---S---SS--EEEEEETT-TTEEEEEEESSSEEEEEEE
T ss_pred EeccccccchhhceEEecccccCCCcceEEEEEcCC-CCEEEEEeCCCChhhEEEc
Confidence 865432222221111 11122234456889999998 6666666666566666654
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=91.34 E-value=2.3 Score=26.88 Aligned_cols=61 Identities=11% Similarity=0.187 Sum_probs=39.9
Q ss_pred cCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 61 HLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 61 ~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
..+..++.|+.+| +.+++..... . .... .+...|..+...++ -+.++.-+ |+.+.++++..
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~---~------~~~i--~~~~~I~ql~vl~~-~~~llvLs-d~~l~~~~L~~ 65 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPS---K------PTRI--LKLSSITQLSVLPE-LNLLLVLS-DGQLYVYDLDS 65 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCc---c------ceeE--eecceEEEEEEecc-cCEEEEEc-CCccEEEEchh
Confidence 3567888888888 8888883221 0 1111 22234888988887 66665554 58999998764
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=90.95 E-value=1.5 Score=30.79 Aligned_cols=64 Identities=14% Similarity=0.208 Sum_probs=44.3
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
+..++|.||..|-|++||.-.... -..+.+ ....|..|....+|.++++.+.. .+.+-|++..
T Consensus 572 esGyIa~as~kGDirLyDRig~rA---------------KtalP~-lG~aIk~idvta~Gk~ilaTCk~-yllL~d~~ik 634 (776)
T COG5167 572 ESGYIAAASRKGDIRLYDRIGKRA---------------KTALPG-LGDAIKHIDVTANGKHILATCKN-YLLLTDVPIK 634 (776)
T ss_pred cCceEEEecCCCceeeehhhcchh---------------hhcCcc-cccceeeeEeecCCcEEEEeecc-eEEEEecccc
Confidence 456899999999999999422110 112333 56788999999999977666544 5777777754
Q ss_pred C
Q psy14817 84 A 84 (138)
Q Consensus 84 ~ 84 (138)
.
T Consensus 635 ~ 635 (776)
T COG5167 635 Y 635 (776)
T ss_pred c
Confidence 3
|
|
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=90.79 E-value=3.8 Score=27.94 Aligned_cols=33 Identities=12% Similarity=0.092 Sum_probs=27.8
Q ss_pred ccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 51 GRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
.+++..++.+|++++++.-..+|.+.+.+.+-.
T Consensus 216 ~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~ 248 (410)
T PF04841_consen 216 DGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFS 248 (410)
T ss_pred CCCeEEEEECCCCCEEEEEECCCCEEEEECccc
Confidence 357999999999999998888999988876544
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=90.76 E-value=3.7 Score=27.75 Aligned_cols=108 Identities=16% Similarity=0.125 Sum_probs=54.5
Q ss_pred CccCCCeEEEe-eCCC----cEEEeeccCCCCCCCccCCCCCCceEEeE-EecCCCccCeEEEEEecCCCeE-EEeeCC-
Q psy14817 1 MIQTGSRLATC-SDDA----TVKIWKEYKPGNSAGIPTPDNDSVWKCVC-TLSGHHGRTIYDISWCHLTDLI-ATACGD- 72 (138)
Q Consensus 1 ~s~~~~~l~t~-s~d~----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~v~~~~~~~~~-~s~~~d- 72 (138)
+||+|+++|-+ +..| .++++|+... +.+. .+.. .....+.|.+++..| .+...+
T Consensus 131 ~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg---------------~~l~d~i~~---~~~~~~~W~~d~~~~~y~~~~~~ 192 (414)
T PF02897_consen 131 VSPDGKRLAYSLSDGGSEWYTLRVFDLETG---------------KFLPDGIEN---PKFSSVSWSDDGKGFFYTRFDED 192 (414)
T ss_dssp ETTTSSEEEEEEEETTSSEEEEEEEETTTT---------------EEEEEEEEE---EESEEEEECTTSSEEEEEECSTT
T ss_pred ECCCCCEEEEEecCCCCceEEEEEEECCCC---------------cCcCCcccc---cccceEEEeCCCCEEEEEEeCcc
Confidence 47999988744 4434 4889997543 2222 2221 112349999998844 443322
Q ss_pred ---------CcEEEEeccCCCCCCceeeeeeeeeeecccc-c-ceeEEEEccCCCCEEEE-EeCC---CcEEEEEcCC
Q psy14817 73 ---------DAIRIFKENPEAGDSDMVSFDLVHTEHRAHN-Q-DVNCVAWNPVVPGMLAS-CSDD---GDVKLWQIKL 135 (138)
Q Consensus 73 ---------~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~v~~~~~~~~~~~~l~~-~~~d---~~v~~wd~~~ 135 (138)
..|+.|.+.... ... ..++.... . ....+..+++ +++++. .... ..+.+.++..
T Consensus 193 ~~~~~~~~~~~v~~~~~gt~~---~~d-----~lvfe~~~~~~~~~~~~~s~d-~~~l~i~~~~~~~~s~v~~~d~~~ 261 (414)
T PF02897_consen 193 QRTSDSGYPRQVYRHKLGTPQ---SED-----ELVFEEPDEPFWFVSVSRSKD-GRYLFISSSSGTSESEVYLLDLDD 261 (414)
T ss_dssp TSS-CCGCCEEEEEEETTS-G---GG------EEEEC-TTCTTSEEEEEE-TT-SSEEEEEEESSSSEEEEEEEECCC
T ss_pred cccccCCCCcEEEEEECCCCh---HhC-----eeEEeecCCCcEEEEEEecCc-ccEEEEEEEccccCCeEEEEeccc
Confidence 126666665432 100 01111222 2 2556778888 776553 3333 3366666654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=90.46 E-value=2.1 Score=28.32 Aligned_cols=51 Identities=12% Similarity=0.208 Sum_probs=34.9
Q ss_pred CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 73 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 73 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+.+.++|+..+. ...+. .....+....|+|+ ++.++... ++.|.+.+..++
T Consensus 23 ~~y~i~d~~~~~----------~~~l~-~~~~~~~~~~~sP~-g~~~~~v~-~~nly~~~~~~~ 73 (353)
T PF00930_consen 23 GDYYIYDIETGE----------ITPLT-PPPPKLQDAKWSPD-GKYIAFVR-DNNLYLRDLATG 73 (353)
T ss_dssp EEEEEEETTTTE----------EEESS--EETTBSEEEE-SS-STEEEEEE-TTEEEEESSTTS
T ss_pred eeEEEEecCCCc----------eEECc-CCccccccceeecC-CCeeEEEe-cCceEEEECCCC
Confidence 468889998764 22222 22567889999999 98888775 567888876543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=90.03 E-value=3.4 Score=26.10 Aligned_cols=81 Identities=11% Similarity=0.160 Sum_probs=45.8
Q ss_pred EEEEEecCCC-eEEEeeCCCcEEEEeccCCCCCCce--eeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEE
Q psy14817 55 YDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDM--VSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 131 (138)
Q Consensus 55 ~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~w 131 (138)
+.++|+.+.+ +...-+.+-.|.-||.+...+.... ..+....... ......-.+++..+ +.+.+++-..++|...
T Consensus 161 Ngl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~-~e~~~PDGm~ID~e-G~L~Va~~ng~~V~~~ 238 (310)
T KOG4499|consen 161 NGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQP-FESLEPDGMTIDTE-GNLYVATFNGGTVQKV 238 (310)
T ss_pred ccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCC-cCCCCCCcceEccC-CcEEEEEecCcEEEEE
Confidence 5788987776 5566667778888885543322221 1122111110 01112223444444 7777777778888888
Q ss_pred EcCCCC
Q psy14817 132 QIKLEN 137 (138)
Q Consensus 132 d~~~~~ 137 (138)
|..+++
T Consensus 239 dp~tGK 244 (310)
T KOG4499|consen 239 DPTTGK 244 (310)
T ss_pred CCCCCc
Confidence 887775
|
|
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=89.87 E-value=3.9 Score=26.64 Aligned_cols=112 Identities=13% Similarity=0.084 Sum_probs=60.7
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
+++++.|.....+.++.+.... .....+..- . ....++++.+-+++..++.+..+|.+.++......
T Consensus 139 ~~~I~vgD~~~sv~~~~~~~~~-----------~~l~~va~d-~-~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~ 205 (321)
T PF03178_consen 139 KNYILVGDAMKSVSLLRYDEEN-----------NKLILVARD-Y-QPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEI 205 (321)
T ss_dssp TTEEEEEESSSSEEEEEEETTT-----------E-EEEEEEE-S-S-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-
T ss_pred ccEEEEEEcccCEEEEEEEccC-----------CEEEEEEec-C-CCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCC
Confidence 5688888888888888654311 112222221 1 24568888888666789999999999999887432
Q ss_pred CC-Ccee-eeeeeeeeecccccceeEE---EEcc--CCC-----CEEEEEeCCCcEEEE
Q psy14817 85 GD-SDMV-SFDLVHTEHRAHNQDVNCV---AWNP--VVP-----GMLASCSDDGDVKLW 131 (138)
Q Consensus 85 ~~-~~~~-~~~~~~~~~~~~~~~v~~~---~~~~--~~~-----~~l~~~~~d~~v~~w 131 (138)
.. .... ........ .....|+++ ++.| ... ..++.++.+|.|-+.
T Consensus 206 ~~~~~~~~~L~~~~~f--~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l 262 (321)
T PF03178_consen 206 PNSRDGDPKLERISSF--HLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL 262 (321)
T ss_dssp SSTTTTTTBEEEEEEE--E-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred cccccccccceeEEEE--ECCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence 11 1111 22212111 233566666 4444 212 248888889988743
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=89.85 E-value=3.5 Score=26.06 Aligned_cols=124 Identities=11% Similarity=0.128 Sum_probs=59.1
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeE-EecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC-TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
+.++++--.++.+.++++........ ....+.+. .+...+...+-.++|++.+..|+.+.......++.+...
T Consensus 76 ~~~vl~~Er~~~L~~~~~~~~~~~~~------~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~ 149 (248)
T PF06977_consen 76 GRYVLSEERDQRLYIFTIDDDTTSLD------RADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGF 149 (248)
T ss_dssp TEEEEEETTTTEEEEEEE----TT--------EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEEST
T ss_pred CEEEEEEcCCCcEEEEEEeccccccc------hhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccc
Confidence 44444444588888888743322110 00001111 111113456889999999887777777777778877652
Q ss_pred CCCCceeeeeeeeee-ecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 84 AGDSDMVSFDLVHTE-HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
............... .......+..+.++|..+++++....+..|..+|..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d~~ 201 (248)
T PF06977_consen 150 PGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELDRQ 201 (248)
T ss_dssp T-SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE-TT
T ss_pred cCccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEECCC
Confidence 200011100000000 112334678899999866677777777778777743
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=89.70 E-value=3.6 Score=25.98 Aligned_cols=71 Identities=11% Similarity=0.039 Sum_probs=42.3
Q ss_pred CeEEEEEecCCCeEEEee---CCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC
Q psy14817 53 TIYDISWCHLTDLIATAC---GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD 125 (138)
Q Consensus 53 ~v~~v~~~~~~~~~~s~~---~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 125 (138)
.|..++++|||..++... .++.|.+--+...... ..................+..+.|.++ ..+++.+...
T Consensus 113 ~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g-~~~~l~~~~~~~~~~~~~v~~v~W~~~-~~L~V~~~~~ 186 (253)
T PF10647_consen 113 RITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDG-VPRRLTGPRRVAPPLLSDVTDVAWSDD-STLVVLGRSA 186 (253)
T ss_pred ceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCC-CcceeccceEecccccCcceeeeecCC-CEEEEEeCCC
Confidence 899999999998655544 3467777766544311 011111112222233468899999998 7766655543
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=89.59 E-value=4.2 Score=26.57 Aligned_cols=81 Identities=11% Similarity=0.273 Sum_probs=42.8
Q ss_pred CCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCC
Q psy14817 37 DSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP 116 (138)
Q Consensus 37 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 116 (138)
..+|+.+.. . -.+.+..+...++|.+++.+..-....-|+..... -..........|..|.|.|+ +
T Consensus 133 G~tW~~~~~--~-~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~----------w~~~~r~~~~riq~~gf~~~-~ 198 (302)
T PF14870_consen 133 GKTWQAVVS--E-TSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTT----------WQPHNRNSSRRIQSMGFSPD-G 198 (302)
T ss_dssp TSSEEEEE---S-----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-----------EEEE--SSS-EEEEEE-TT-S
T ss_pred CCCeeEccc--C-CcceeEeEEECCCCcEEEEECcccEEEEecCCCcc----------ceEEccCccceehhceecCC-C
Confidence 345554432 2 34678888888999988877665556677655332 11112234578999999998 7
Q ss_pred CEEEEEeCCCcEEEEE
Q psy14817 117 GMLASCSDDGDVKLWQ 132 (138)
Q Consensus 117 ~~l~~~~~d~~v~~wd 132 (138)
.+.+.+ ..|.|++=+
T Consensus 199 ~lw~~~-~Gg~~~~s~ 213 (302)
T PF14870_consen 199 NLWMLA-RGGQIQFSD 213 (302)
T ss_dssp -EEEEE-TTTEEEEEE
T ss_pred CEEEEe-CCcEEEEcc
Confidence 765544 677777654
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=89.41 E-value=4.9 Score=27.07 Aligned_cols=58 Identities=7% Similarity=0.048 Sum_probs=33.9
Q ss_pred CCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeE-EEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 63 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNC-VAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 63 ~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
+..++.++.+|.+...|...++ ..-...-....+.. ..+ . +..|+.++.||.|..+++
T Consensus 335 ~g~l~v~~~~G~l~~ld~~tG~----------~~~~~~~~~~~~~s~P~~--~-~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 335 NGYLVVGDSEGYLHWINREDGR----------FVAQQKVDSSGFLSEPVV--A-DDKLLIQARDGTVYAITR 393 (394)
T ss_pred CCEEEEEeCCCEEEEEECCCCC----------EEEEEEcCCCcceeCCEE--E-CCEEEEEeCCceEEEEeC
Confidence 3466777888888888887765 21111111111221 111 2 457888899999988764
|
|
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=89.07 E-value=3.3 Score=27.99 Aligned_cols=69 Identities=6% Similarity=0.001 Sum_probs=32.6
Q ss_pred EEecCCC-eEEEeeCCCc--EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 58 SWCHLTD-LIATACGDDA--IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 58 ~~~~~~~-~~~s~~~d~~--i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
+|.++|. +++.+..|+. +.+.|+..++ ..++..+.........++|+ .+.++....+..|+-.|++
T Consensus 42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~----------i~QLTdg~g~~~~g~~~s~~-~~~~~Yv~~~~~l~~vdL~ 110 (386)
T PF14583_consen 42 CFTDDGRKLLFASDFDGNRNLYLLDLATGE----------ITQLTDGPGDNTFGGFLSPD-DRALYYVKNGRSLRRVDLD 110 (386)
T ss_dssp -B-TTS-EEEEEE-TTSS-EEEEEETTT-E----------EEE---SS-B-TTT-EE-TT-SSEEEEEETTTEEEEEETT
T ss_pred CcCCCCCEEEEEeccCCCcceEEEEcccCE----------EEECccCCCCCccceEEecC-CCeEEEEECCCeEEEEECC
Confidence 4677886 6666666776 4444555543 33322222222334556677 6666666555677777776
Q ss_pred CCC
Q psy14817 135 LEN 137 (138)
Q Consensus 135 ~~~ 137 (138)
+.+
T Consensus 111 T~e 113 (386)
T PF14583_consen 111 TLE 113 (386)
T ss_dssp T--
T ss_pred cCc
Confidence 653
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.03 E-value=4.7 Score=26.40 Aligned_cols=80 Identities=9% Similarity=0.023 Sum_probs=41.8
Q ss_pred ccCeEEEEEecCCCeEEEe-eCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCC-cE
Q psy14817 51 GRTIYDISWCHLTDLIATA-CGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG-DV 128 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-~v 128 (138)
-..-+.|+|+|+++.+..+ +..+.|.-|++........... .........+..-.++...+ +.+.+++-.+| .|
T Consensus 162 ~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~---~~~~~~~~~G~PDG~~vDad-G~lw~~a~~~g~~v 237 (307)
T COG3386 162 LTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRR---GFVDFDEEPGLPDGMAVDAD-GNLWVAAVWGGGRV 237 (307)
T ss_pred EEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcc---eEEEccCCCCCCCceEEeCC-CCEEEecccCCceE
Confidence 3445789999999855544 4456788777763211111111 01111122334444555555 66664444443 67
Q ss_pred EEEEcC
Q psy14817 129 KLWQIK 134 (138)
Q Consensus 129 ~~wd~~ 134 (138)
..|+..
T Consensus 238 ~~~~pd 243 (307)
T COG3386 238 VRFNPD 243 (307)
T ss_pred EEECCC
Confidence 777765
|
|
| >PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes | Back alignment and domain information |
|---|
Probab=88.17 E-value=4.8 Score=25.42 Aligned_cols=121 Identities=11% Similarity=0.143 Sum_probs=59.1
Q ss_pred CccCCCeEEEeeC---CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCC-cEE
Q psy14817 1 MIQTGSRLATCSD---DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD-AIR 76 (138)
Q Consensus 1 ~s~~~~~l~t~s~---d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~-~i~ 76 (138)
+-+||+++.+|+. ...+++++...... ...|........ .....-....-++|+.++.|+... +..
T Consensus 74 ~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~---------~~~w~e~~~~m~-~~RWYpT~~~L~DG~vlIvGG~~~~t~E 143 (243)
T PF07250_consen 74 FLPDGRLLQTGGDNDGNKAIRIFTPCTSDG---------TCDWTESPNDMQ-SGRWYPTATTLPDGRVLIVGGSNNPTYE 143 (243)
T ss_pred CCCCCCEEEeCCCCccccceEEEecCCCCC---------CCCceECccccc-CCCccccceECCCCCEEEEeCcCCCccc
Confidence 3478999999875 23577777432000 112222211111 244555666778999777777653 344
Q ss_pred EEeccCCCCCCceeeeeeeeeeec-ccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 77 IFKENPEAGDSDMVSFDLVHTEHR-AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+|...... .............. .....=-.+...|+ +++++.+..+. .+||..+.
T Consensus 144 ~~P~~~~~--~~~~~~~~l~~~~~~~~~nlYP~~~llPd-G~lFi~an~~s--~i~d~~~n 199 (243)
T PF07250_consen 144 FWPPKGPG--PGPVTLPFLSQTSDTLPNNLYPFVHLLPD-GNLFIFANRGS--IIYDYKTN 199 (243)
T ss_pred ccCCccCC--CCceeeecchhhhccCccccCceEEEcCC-CCEEEEEcCCc--EEEeCCCC
Confidence 44332111 01111111111000 01111123555788 99999998765 44566544
|
Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium []. |
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=87.60 E-value=1.4 Score=18.59 Aligned_cols=28 Identities=11% Similarity=0.133 Sum_probs=18.4
Q ss_pred ccCeEEEEEecCCC-eEEEeeCC--CcEEEE
Q psy14817 51 GRTIYDISWCHLTD-LIATACGD--DAIRIF 78 (138)
Q Consensus 51 ~~~v~~v~~~~~~~-~~~s~~~d--~~i~i~ 78 (138)
...-....|+|+|+ ++.++..+ |...||
T Consensus 8 ~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 8 PGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 44667889999998 45555566 655555
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=87.47 E-value=6 Score=27.60 Aligned_cols=94 Identities=18% Similarity=0.219 Sum_probs=54.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
||+|.+.+|.--.|.+|-+++....... .....+.+. ....|.+..|...-. ++-....| +-+|..
T Consensus 74 FSlDnkilAVQR~~~~v~f~nf~~d~~~-----------l~~~~~ck~-k~~~IlGF~W~~s~e-~A~i~~~G-~e~y~v 139 (657)
T KOG2377|consen 74 FSLDNKILAVQRTSKTVDFCNFIPDNSQ-----------LEYTQECKT-KNANILGFCWTSSTE-IAFITDQG-IEFYQV 139 (657)
T ss_pred eccCcceEEEEecCceEEEEecCCCchh-----------hHHHHHhcc-CcceeEEEEEecCee-EEEEecCC-eEEEEE
Confidence 7899999999999999999986433221 011122222 345688899986633 33333333 666654
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCE
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGM 118 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 118 (138)
.... ...+..+.+...|+--.|.++ .+.
T Consensus 140 ~pek---------rslRlVks~~~nvnWy~yc~e-t~v 167 (657)
T KOG2377|consen 140 LPEK---------RSLRLVKSHNLNVNWYMYCPE-TAV 167 (657)
T ss_pred chhh---------hhhhhhhhcccCccEEEEccc-cce
Confidence 4332 112233356667777777777 554
|
|
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=87.10 E-value=8.9 Score=27.34 Aligned_cols=81 Identities=16% Similarity=0.215 Sum_probs=49.7
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeE------EecCCCccCeEEEEEecCC---CeEEEeeCC
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC------TLSGHHGRTIYDISWCHLT---DLIATACGD 72 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~v~~v~~~~~~---~~~~s~~~d 72 (138)
|+.|..++-.+-+|.+.++-.+..++.....++ .+...|.. -+.....-.+..++|+|+. ..+..-..|
T Consensus 112 s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDg--k~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~iL~sd 189 (741)
T KOG4460|consen 112 SPTGSHVALIGIKGLMVMELPKRWGKNSEFEDG--KSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLVLLTSD 189 (741)
T ss_pred cCCCceEEEecCCeeEEEEchhhcCccceecCC--CceEEEEeecccceeeccCCceeeeeccccCCccCCceEEEEecC
Confidence 678999998999998887764433332222221 11112211 0111112345678999987 477777889
Q ss_pred CcEEEEeccCCC
Q psy14817 73 DAIRIFKENPEA 84 (138)
Q Consensus 73 ~~i~i~~~~~~~ 84 (138)
..+++|++....
T Consensus 190 nviRiy~lS~~t 201 (741)
T KOG4460|consen 190 NVIRIYSLSEPT 201 (741)
T ss_pred cEEEEEecCCcc
Confidence 999999988654
|
|
| >smart00564 PQQ beta-propeller repeat | Back alignment and domain information |
|---|
Probab=86.80 E-value=1.4 Score=17.68 Aligned_cols=21 Identities=24% Similarity=0.256 Sum_probs=16.3
Q ss_pred CEEEEEeCCCcEEEEEcCCCC
Q psy14817 117 GMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 117 ~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..++.++.++.+..+|.++++
T Consensus 7 ~~v~~~~~~g~l~a~d~~~G~ 27 (33)
T smart00564 7 GTVYVGSTDGTLYALDAKTGE 27 (33)
T ss_pred CEEEEEcCCCEEEEEEcccCc
Confidence 367777888889888887765
|
Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases. |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=86.71 E-value=5.4 Score=24.41 Aligned_cols=101 Identities=13% Similarity=0.070 Sum_probs=55.3
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCcc----------CeEEEEEecCCCeEEEeeCCCc
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR----------TIYDISWCHLTDLIATACGDDA 74 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~v~~v~~~~~~~~~~s~~~d~~ 74 (138)
+..++.+..++.|..+|.... +.+..... ... .+..-....++ .++.+..++.
T Consensus 122 ~~~~~~~~~~g~l~~~d~~tG---------------~~~w~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~ 184 (238)
T PF13360_consen 122 GDRLYVGTSSGKLVALDPKTG---------------KLLWKYPV-GEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGR 184 (238)
T ss_dssp TTEEEEEETCSEEEEEETTTT---------------EEEEEEES-STT-SS--EEEETTEEEEEECCTT-EEEEECCTSS
T ss_pred cCEEEEEeccCcEEEEecCCC---------------cEEEEeec-CCCCCCcceeeecccccceEEECC-EEEEEcCCCe
Confidence 566777777888888886443 22333322 111 11122222233 5666666665
Q ss_pred -EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 75 -IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 75 -i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.+ |+..+. .. .... ...+..+ .... +..++.++.++.|..||+++++
T Consensus 185 ~~~~-d~~tg~----------~~-w~~~-~~~~~~~-~~~~-~~~l~~~~~~~~l~~~d~~tG~ 233 (238)
T PF13360_consen 185 VVAV-DLATGE----------KL-WSKP-ISGIYSL-PSVD-GGTLYVTSSDGRLYALDLKTGK 233 (238)
T ss_dssp EEEE-ETTTTE----------EE-EEEC-SS-ECEC-EECC-CTEEEEEETTTEEEEEETTTTE
T ss_pred EEEE-ECCCCC----------EE-EEec-CCCccCC-ceee-CCEEEEEeCCCEEEEEECCCCC
Confidence 555 877654 11 1111 1122221 2344 6777777799999999999886
|
... |
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=86.54 E-value=7.9 Score=26.21 Aligned_cols=59 Identities=12% Similarity=0.115 Sum_probs=34.6
Q ss_pred EEEEEecCCCeEE-EeeCCC----cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC
Q psy14817 55 YDISWCHLTDLIA-TACGDD----AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD 125 (138)
Q Consensus 55 ~~v~~~~~~~~~~-s~~~d~----~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 125 (138)
....++|++.+++ +.+..| .++++|+..+. ...... .. .....+.|.++ +..|+....+
T Consensus 127 ~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~---------~l~d~i-~~-~~~~~~~W~~d-~~~~~y~~~~ 190 (414)
T PF02897_consen 127 GGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGK---------FLPDGI-EN-PKFSSVSWSDD-GKGFFYTRFD 190 (414)
T ss_dssp EEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTE---------EEEEEE-EE-EESEEEEECTT-SSEEEEEECS
T ss_pred eeeeECCCCCEEEEEecCCCCceEEEEEEECCCCc---------CcCCcc-cc-cccceEEEeCC-CCEEEEEEeC
Confidence 3578899999554 434444 49999998764 111111 11 11223899998 7766655543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=86.51 E-value=7.9 Score=26.14 Aligned_cols=105 Identities=15% Similarity=0.146 Sum_probs=62.4
Q ss_pred cCCC-eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC---CCcEEEE
Q psy14817 3 QTGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG---DDAIRIF 78 (138)
Q Consensus 3 ~~~~-~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~---d~~i~i~ 78 (138)
+.+. .+++...+..|.+.|.... +....... ......+++++++..+..+.. ++++.+.
T Consensus 83 ~~~~~vyv~~~~~~~v~vid~~~~---------------~~~~~~~v--G~~P~~~~~~~~~~~vYV~n~~~~~~~vsvi 145 (381)
T COG3391 83 PAGNKVYVTTGDSNTVSVIDTATN---------------TVLGSIPV--GLGPVGLAVDPDGKYVYVANAGNGNNTVSVI 145 (381)
T ss_pred CCCCeEEEecCCCCeEEEEcCccc---------------ceeeEeee--ccCCceEEECCCCCEEEEEecccCCceEEEE
Confidence 4444 5555556688888883221 12222222 225568999999985555443 5778887
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEE-EEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA-SCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~d~~v~~wd~~~~ 136 (138)
|..... ...... ....+ ..+++.|+ +..+. +-..++.|.+.|....
T Consensus 146 d~~t~~---------~~~~~~-vG~~P-~~~a~~p~-g~~vyv~~~~~~~v~vi~~~~~ 192 (381)
T COG3391 146 DAATNK---------VTATIP-VGNTP-TGVAVDPD-GNKVYVTNSDDNTVSVIDTSGN 192 (381)
T ss_pred eCCCCe---------EEEEEe-cCCCc-ceEEECCC-CCeEEEEecCCCeEEEEeCCCc
Confidence 777654 122211 11223 88999999 77554 4447888999886654
|
|
| >PF14727 PHTB1_N: PTHB1 N-terminus | Back alignment and domain information |
|---|
Probab=86.43 E-value=8.6 Score=26.48 Aligned_cols=115 Identities=11% Similarity=0.200 Sum_probs=62.0
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC----CCeEEEeeCCCcEEEEe
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL----TDLIATACGDDAIRIFK 79 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~----~~~~~s~~~d~~i~i~~ 79 (138)
+...|+.||..|.++||+...... ... ..+.+.+ -..+|..+....- ....++.-.-..+.+|.
T Consensus 36 ~~d~IivGS~~G~LrIy~P~~~~~---------~~~-~lllE~~--l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~ 103 (418)
T PF14727_consen 36 GSDKIIVGSYSGILRIYDPSGNEF---------QPE-DLLLETQ--LKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYS 103 (418)
T ss_pred CccEEEEeccccEEEEEccCCCCC---------CCc-cEEEEEe--cCCcEEEEEeccccCCCCcceEEEecCCEEEEEE
Confidence 346899999999999999632221 111 1233322 2567777765432 22333344556788888
Q ss_pred ccCCCCC---Cceeeeeeeeeeecccc--cceeEEEEcc---C-CCCEEEEEeCCCcEEEEEcC
Q psy14817 80 ENPEAGD---SDMVSFDLVHTEHRAHN--QDVNCVAWNP---V-VPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 80 ~~~~~~~---~~~~~~~~~~~~~~~~~--~~v~~~~~~~---~-~~~~l~~~~~d~~v~~wd~~ 134 (138)
+....+. ......... ..|. .....+.+-| . ...+++.-+.||.+.+++-+
T Consensus 104 v~~~~g~~~~g~~~~L~~~----yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe 163 (418)
T PF14727_consen 104 VSLVDGTVEHGNQYQLELI----YEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQE 163 (418)
T ss_pred EEecCCCcccCcEEEEEEE----EEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCC
Confidence 8543311 112222211 1222 1222232222 2 14688899999999999754
|
|
| >KOG1900|consensus | Back alignment and domain information |
|---|
Probab=85.82 E-value=16 Score=28.98 Aligned_cols=83 Identities=12% Similarity=0.106 Sum_probs=50.2
Q ss_pred ccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeee-------------eeeeeeecccccceeEEEEccCCCC
Q psy14817 51 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSF-------------DLVHTEHRAHNQDVNCVAWNPVVPG 117 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~v~~~~~~~~~~~ 117 (138)
...|+++....+|+.|++|- ||.|+-.-.....+.-..... +........+..+|..+.+... .+
T Consensus 178 g~~V~~I~~t~nGRIF~~G~-dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~S-R~ 255 (1311)
T KOG1900|consen 178 GVSVNCITYTENGRIFFAGR-DGNLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDNS-RN 255 (1311)
T ss_pred CceEEEEEeccCCcEEEeec-CCCEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEeccc-cc
Confidence 45678888777777777764 454443222222211111000 0011111245678999988776 77
Q ss_pred EEEEEeCCCcEEEEEcCC
Q psy14817 118 MLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 118 ~l~~~~~d~~v~~wd~~~ 135 (138)
++.+-+..++|.+||+..
T Consensus 256 IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 256 ILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred eeeeeccCceEEEEEccC
Confidence 888999999999999876
|
|
| >PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal | Back alignment and domain information |
|---|
Probab=85.71 E-value=4.8 Score=22.90 Aligned_cols=111 Identities=13% Similarity=0.132 Sum_probs=61.6
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC---C--CeEEEeeCCCcEEEE
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL---T--DLIATACGDDAIRIF 78 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~---~--~~~~s~~~d~~i~i~ 78 (138)
....|+.++.-+.|.|++.......... ....+..+.- ...|++++-.+- . ..|+.|+. ..+..|
T Consensus 9 ~~pcL~~aT~~gKV~IH~ph~~~~~~~~-------~~~~i~~LNi--n~~italaaG~l~~~~~~D~LliGt~-t~llaY 78 (136)
T PF14781_consen 9 VHPCLACATTGGKVFIHNPHERGQRTGR-------QDSDISFLNI--NQEITALAAGRLKPDDGRDCLLIGTQ-TSLLAY 78 (136)
T ss_pred CceeEEEEecCCEEEEECCCcccccccc-------ccCceeEEEC--CCceEEEEEEecCCCCCcCEEEEecc-ceEEEE
Confidence 3457888999999999997544322111 1122333332 456777764442 2 36666654 469999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEE---ccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW---NPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|+.... ..+.+.-...|+++.+ ... ..-++..+.+..|.-||....
T Consensus 79 DV~~N~-----------d~Fyke~~DGvn~i~~g~~~~~-~~~l~ivGGncsi~Gfd~~G~ 127 (136)
T PF14781_consen 79 DVENNS-----------DLFYKEVPDGVNAIVIGKLGDI-PSPLVIVGGNCSIQGFDYEGN 127 (136)
T ss_pred EcccCc-----------hhhhhhCccceeEEEEEecCCC-CCcEEEECceEEEEEeCCCCc
Confidence 998654 1222333456666654 222 334444444556666665543
|
|
| >PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=85.08 E-value=1.7 Score=17.06 Aligned_cols=25 Identities=8% Similarity=0.222 Sum_probs=16.7
Q ss_pred eEEEEEecCCCeEEEeeCCCcEEEE
Q psy14817 54 IYDISWCHLTDLIATACGDDAIRIF 78 (138)
Q Consensus 54 v~~v~~~~~~~~~~s~~~d~~i~i~ 78 (138)
..+++++++|..+++=...+.|+++
T Consensus 4 P~gvav~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 4 PHGVAVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEEEEEETTSEEEEEECCCTEEEEE
T ss_pred CcEEEEeCCCCEEEEECCCCEEEEC
Confidence 4567777777777766666666654
|
For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A. |
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=84.75 E-value=9.8 Score=25.67 Aligned_cols=64 Identities=9% Similarity=0.018 Sum_probs=35.6
Q ss_pred CCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 62 LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 62 ~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.+..++.++.++.+..+|...++ ..+.... . .. ........ . +..++.++.||.+...|..+++
T Consensus 293 ~~~~vy~~~~~g~l~ald~~tG~-----~~W~~~~--~-~~-~~~~sp~v--~-~g~l~v~~~~G~l~~ld~~tG~ 356 (394)
T PRK11138 293 DGGRIYLVDQNDRVYALDTRGGV-----ELWSQSD--L-LH-RLLTAPVL--Y-NGYLVVGDSEGYLHWINREDGR 356 (394)
T ss_pred ECCEEEEEcCCCeEEEEECCCCc-----EEEcccc--c-CC-CcccCCEE--E-CCEEEEEeCCCEEEEEECCCCC
Confidence 35566667778888888887654 1110000 0 00 01111111 1 4567777888888888887765
|
|
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=84.58 E-value=7 Score=25.53 Aligned_cols=58 Identities=12% Similarity=0.040 Sum_probs=38.8
Q ss_pred EEEEecCCCeEEEeeCC-----CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe
Q psy14817 56 DISWCHLTDLIATACGD-----DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 123 (138)
Q Consensus 56 ~v~~~~~~~~~~s~~~d-----~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 123 (138)
.-.|+|+|.+|...-.| |.|=|||.+..- .....+..|.-....+.|.+| ++.++.++
T Consensus 118 HGvfs~dG~~LYATEndfd~~rGViGvYd~r~~f---------qrvgE~~t~GiGpHev~lm~D-Grtlvvan 180 (366)
T COG3490 118 HGVFSPDGRLLYATENDFDPNRGVIGVYDAREGF---------QRVGEFSTHGIGPHEVTLMAD-GRTLVVAN 180 (366)
T ss_pred ccccCCCCcEEEeecCCCCCCCceEEEEeccccc---------ceecccccCCcCcceeEEecC-CcEEEEeC
Confidence 34689999977765333 568899888543 122333456666778888898 88887764
|
|
| >PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []) | Back alignment and domain information |
|---|
Probab=84.57 E-value=6.3 Score=23.29 Aligned_cols=30 Identities=27% Similarity=0.481 Sum_probs=24.3
Q ss_pred ceeEEEEccC-----CCCEEEEEeCCCcEEEEEcC
Q psy14817 105 DVNCVAWNPV-----VPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 105 ~v~~~~~~~~-----~~~~l~~~~~d~~v~~wd~~ 134 (138)
.+..++|+|. ..-+|+..+.++.|.+|...
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~ 121 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPP 121 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecC
Confidence 7889999984 13478888999999999755
|
The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 []. |
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=84.48 E-value=0.057 Score=36.91 Aligned_cols=104 Identities=15% Similarity=0.250 Sum_probs=58.7
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCe-EEEeeCCCcEEEEecc
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDL-IATACGDDAIRIFKEN 81 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~-~~s~~~d~~i~i~~~~ 81 (138)
|++.-++.++.+..+..||-... ...... ..+....++|..++.. ++.+-..+.+.+|++.
T Consensus 44 ~e~~nlavaca~tiv~~YD~agq----------------~~le~n--~tg~aldm~wDkegdvlavlAek~~piylwd~n 105 (615)
T KOG2247|consen 44 PEGHNLAVACANTIVIYYDKAGQ----------------VILELN--PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVN 105 (615)
T ss_pred cCCCceehhhhhhHHHhhhhhcc----------------eecccC--CchhHhhhhhccccchhhhhhhcCCCeeechhh
Confidence 45555677777777777773211 112221 2445567888888874 4445567789999998
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
... ......+.+..-.-+.|++. ...++.+...+.+++++.++
T Consensus 106 ~ey----------tqqLE~gg~~s~sll~wsKg-~~el~ig~~~gn~viynhgt 148 (615)
T KOG2247|consen 106 SEY----------TQQLESGGTSSKSLLAWSKG-TPELVIGNNAGNIVIYNHGT 148 (615)
T ss_pred hhh----------HHHHhccCcchHHHHhhccC-CccccccccccceEEEeccc
Confidence 643 11111111111122566766 66666666677777776543
|
|
| >PF01011 PQQ: PQQ enzyme repeat family | Back alignment and domain information |
|---|
Probab=84.46 E-value=2.1 Score=18.11 Aligned_cols=19 Identities=16% Similarity=0.102 Sum_probs=13.8
Q ss_pred EEEEeCCCcEEEEEcCCCC
Q psy14817 119 LASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 119 l~~~~~d~~v~~wd~~~~~ 137 (138)
++.++.||.|.-.|.++++
T Consensus 3 v~~~~~~g~l~AlD~~TG~ 21 (38)
T PF01011_consen 3 VYVGTPDGYLYALDAKTGK 21 (38)
T ss_dssp EEEETTTSEEEEEETTTTS
T ss_pred EEEeCCCCEEEEEECCCCC
Confidence 4455778888888887775
|
; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A .... |
| >PF10584 Proteasome_A_N: Proteasome subunit A N-terminal signature; InterPro: IPR000426 The proteasome (or macropain) (3 | Back alignment and domain information |
|---|
Probab=84.31 E-value=0.25 Score=18.71 Aligned_cols=7 Identities=14% Similarity=0.183 Sum_probs=5.0
Q ss_pred CccCCCe
Q psy14817 1 MIQTGSR 7 (138)
Q Consensus 1 ~s~~~~~ 7 (138)
|||+|++
T Consensus 8 FSp~Grl 14 (23)
T PF10584_consen 8 FSPDGRL 14 (23)
T ss_dssp BBTTSSB
T ss_pred ECCCCeE
Confidence 6777775
|
4.25.1 from EC) [, , , , ] is a eukaryotic and archaeal multicatalytic proteinase complex that seems to be involved in an ATP/ubiquitin-dependent nonlysosomal proteolytic pathway. In eukaryotes the proteasome is composed of about 28 distinct subunits which form a highly ordered ring-shaped structure (20S ring) of about 700 kDa. Most proteasome subunits can be classified, on the basis on sequence similarities into two groups, alpha (A) and beta (B). This family contains the alpha subunit sequences which range from 210 to 290 amino acids. These sequences are classified as non-peptidase homologues in MEROPS peptidase family T1 (clan PB(T)). ; GO: 0004175 endopeptidase activity, 0006511 ubiquitin-dependent protein catabolic process, 0019773 proteasome core complex, alpha-subunit complex; PDB: 3H4P_M 1IRU_O 3UN4_U 1FNT_A 3OEV_G 3OEU_U 3SDK_U 3DY3_G 3MG7_G 3L5Q_C .... |
| >PF14761 HPS3_N: Hermansky-Pudlak syndrome 3 | Back alignment and domain information |
|---|
Probab=83.86 E-value=8 Score=23.94 Aligned_cols=50 Identities=10% Similarity=0.105 Sum_probs=30.8
Q ss_pred CeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe
Q psy14817 64 DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 123 (138)
Q Consensus 64 ~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 123 (138)
..++.+.....|.+|++.... .. ....+ ..-+.|..+.++.. ++++++-=
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~---~~-----~~~~F-~Tv~~V~~l~y~~~-GDYlvTlE 78 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEE---CP-----LLCTF-STVGRVLQLVYSEA-GDYLVTLE 78 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCC---Cc-----eeEEE-cchhheeEEEeccc-cceEEEEE
Confidence 344333455679999998332 11 11112 23378889999988 88888753
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=83.57 E-value=12 Score=25.93 Aligned_cols=109 Identities=13% Similarity=0.122 Sum_probs=47.8
Q ss_pred eCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCC-ccCeEEEEEecCC--C-eEEEeeCCCcEEEEeccCCCCCC
Q psy14817 12 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-GRTIYDISWCHLT--D-LIATACGDDAIRIFKENPEAGDS 87 (138)
Q Consensus 12 s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~v~~~~~~--~-~~~s~~~d~~i~i~~~~~~~~~~ 87 (138)
....++.+||+... +.++++.-.. ......|+|..+. . -|+.+....+|..|--.......
T Consensus 219 ~yG~~l~vWD~~~r---------------~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~ 283 (461)
T PF05694_consen 219 KYGHSLHVWDWSTR---------------KLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWA 283 (461)
T ss_dssp -S--EEEEEETTTT---------------EEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEE
T ss_pred cccCeEEEEECCCC---------------cEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCee
Confidence 34678999997443 4466655411 2346678876554 3 34444455556655432221010
Q ss_pred ceeeeeeeee------------eecccccceeEEEEccCCCCEEEEEe-CCCcEEEEEcCCC
Q psy14817 88 DMVSFDLVHT------------EHRAHNQDVNCVAWNPVVPGMLASCS-DDGDVKLWQIKLE 136 (138)
Q Consensus 88 ~~~~~~~~~~------------~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~v~~wd~~~~ 136 (138)
.+........ .+..-..-|+.+.++.+ .++|...+ .+|.|+.||+...
T Consensus 284 a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlD-DrfLYvs~W~~GdvrqYDISDP 344 (461)
T PF05694_consen 284 AEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLD-DRFLYVSNWLHGDVRQYDISDP 344 (461)
T ss_dssp EEEEEEE--EE--SS---GGGGGG-EE------EEE-TT-S-EEEEEETTTTEEEEEE-SST
T ss_pred eeEEEECCCcccCcccccccccccccCCCceEeEEEccC-CCEEEEEcccCCcEEEEecCCC
Confidence 1111111000 00011245789999998 77765555 5999999998654
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=83.55 E-value=14 Score=26.49 Aligned_cols=20 Identities=5% Similarity=0.114 Sum_probs=11.4
Q ss_pred CCEEEEEeCC------CcEEEEEcCC
Q psy14817 116 PGMLASCSDD------GDVKLWQIKL 135 (138)
Q Consensus 116 ~~~l~~~~~d------~~v~~wd~~~ 135 (138)
+.+.+.|+.+ ..+..||..+
T Consensus 464 ~~IYv~GG~~~~~~~~~~ve~Ydp~~ 489 (557)
T PHA02713 464 DDIYVVCDIKDEKNVKTCIFRYNTNT 489 (557)
T ss_pred CEEEEEeCCCCCCccceeEEEecCCC
Confidence 5556666543 2355677665
|
|
| >PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A | Back alignment and domain information |
|---|
Probab=83.47 E-value=2.6 Score=17.95 Aligned_cols=20 Identities=15% Similarity=0.189 Sum_probs=15.6
Q ss_pred CCEEEEEeCCCcEEEEEcCC
Q psy14817 116 PGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 116 ~~~l~~~~~d~~v~~wd~~~ 135 (138)
+..++.++.|+.+..+|.++
T Consensus 21 ~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 21 GGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp TSEEEEE-TTSEEEEEETT-
T ss_pred CCEEEEEcCCCEEEEEeCCC
Confidence 56888889999999999764
|
|
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=83.07 E-value=8.4 Score=27.38 Aligned_cols=60 Identities=12% Similarity=0.154 Sum_probs=40.8
Q ss_pred CCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 63 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 63 ~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
..+++.++..|-|++||--... ....+.+-...|..+....+ +.+++..|.. .+-+.|++
T Consensus 573 sGyIa~as~kGDirLyDRig~r----------AKtalP~lG~aIk~idvta~-Gk~ilaTCk~-yllL~d~~ 632 (776)
T COG5167 573 SGYIAAASRKGDIRLYDRIGKR----------AKTALPGLGDAIKHIDVTAN-GKHILATCKN-YLLLTDVP 632 (776)
T ss_pred CceEEEecCCCceeeehhhcch----------hhhcCcccccceeeeEeecC-CcEEEEeecc-eEEEEecc
Confidence 4589999999999999865432 12222345567888888888 8877776654 35555554
|
|
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=81.64 E-value=13 Score=24.65 Aligned_cols=109 Identities=15% Similarity=0.132 Sum_probs=50.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEe---cCCCccCeEEEEEecC----CCeEEEeeCC-
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL---SGHHGRTIYDISWCHL----TDLIATACGD- 72 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~v~~~~~----~~~~~s~~~d- 72 (138)
|.|+|+.|++- ..|.|++++..... ...+..+ ..........++++|+ +.+.+..+..
T Consensus 9 ~~pdG~l~v~e-~~G~i~~~~~~g~~-------------~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~ 74 (331)
T PF07995_consen 9 FLPDGRLLVAE-RSGRIWVVDKDGSL-------------KTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNAD 74 (331)
T ss_dssp EETTSCEEEEE-TTTEEEEEETTTEE-------------CEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-
T ss_pred EeCCCcEEEEe-CCceEEEEeCCCcC-------------cceecccccccccccCCcccceeccccCCCCEEEEEEEccc
Confidence 46888888765 58999999922111 0122222 1113557889999995 3333333311
Q ss_pred -----C--cEEEEeccCCCCCCceeeeeeee-eeec--ccccceeEEEEccCCCCEEEEEeCCC
Q psy14817 73 -----D--AIRIFKENPEAGDSDMVSFDLVH-TEHR--AHNQDVNCVAWNPVVPGMLASCSDDG 126 (138)
Q Consensus 73 -----~--~i~i~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d~ 126 (138)
. .|.-|...... ........+. .... .....-..|.|.|+ +.++++.+..+
T Consensus 75 ~~~~~~~~~v~r~~~~~~~--~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpD-G~LYvs~G~~~ 135 (331)
T PF07995_consen 75 EDGGDNDNRVVRFTLSDGD--GDLSSEEVLVTGLPDTSSGNHNGGGLAFGPD-GKLYVSVGDGG 135 (331)
T ss_dssp TSSSSEEEEEEEEEEETTS--CEEEEEEEEEEEEES-CSSSS-EEEEEE-TT-SEEEEEEB-TT
T ss_pred CCCCCcceeeEEEeccCCc--cccccceEEEEEeCCCCCCCCCCccccCCCC-CcEEEEeCCCC
Confidence 1 23333333321 1111111111 1111 12345566999998 77666665433
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 138 | ||||
| 3fm0_A | 345 | Crystal Structure Of Wd40 Protein Ciao1 Length = 34 | 2e-44 | ||
| 2pm9_B | 297 | Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT O | 1e-06 | ||
| 3jro_A | 753 | Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice | 2e-06 | ||
| 2pm6_B | 297 | Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF | 2e-06 | ||
| 3jrp_A | 379 | Sec13 With Nup145c (Aa109-179) Insertion Blade Leng | 2e-06 | ||
| 3bg0_A | 316 | Architecture Of A Coat For The Nuclear Pore Membran | 2e-06 | ||
| 2hes_X | 330 | Cytosolic Iron-sulphur Assembly Protein- 1 Length = | 1e-05 | ||
| 2pm7_B | 297 | Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF | 2e-05 | ||
| 2ymu_A | 577 | Structure Of A Highly Repetitive Propeller Structur | 3e-04 | ||
| 1vyh_C | 410 | Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | 3e-04 | ||
| 3ewe_A | 349 | Crystal Structure Of The Nup85SEH1 COMPLEX Length = | 4e-04 | ||
| 3f3f_A | 351 | Crystal Structure Of The Nucleoporin Pair Nup85-Seh | 4e-04 | ||
| 3cfs_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 7e-04 | ||
| 3f3p_A | 351 | Crystal Structure Of The Nucleoporin Pair Nup85-Seh | 8e-04 |
| >pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345 | Back alignment and structure |
|
| >pdb|2PM9|B Chain B, Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT OF THE Copii Vesicular Coat Length = 297 | Back alignment and structure |
|
| >pdb|3JRO|A Chain A, Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice Length = 753 | Back alignment and structure |
|
| >pdb|2PM6|B Chain B, Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE Copii Vesicular Coat, Native Version Length = 297 | Back alignment and structure |
|
| >pdb|3JRP|A Chain A, Sec13 With Nup145c (Aa109-179) Insertion Blade Length = 379 | Back alignment and structure |
|
| >pdb|3BG0|A Chain A, Architecture Of A Coat For The Nuclear Pore Membrane Length = 316 | Back alignment and structure |
|
| >pdb|2HES|X Chain X, Cytosolic Iron-sulphur Assembly Protein- 1 Length = 330 | Back alignment and structure |
|
| >pdb|2PM7|B Chain B, Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE Copii Vesicular Coat, Selenomethionine Version Length = 297 | Back alignment and structure |
|
| >pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577 | Back alignment and structure |
|
| >pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | Back alignment and structure |
|
| >pdb|3EWE|A Chain A, Crystal Structure Of The Nup85SEH1 COMPLEX Length = 349 | Back alignment and structure |
|
| >pdb|3F3F|A Chain A, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space Group P21 Length = 351 | Back alignment and structure |
|
| >pdb|3CFS|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|3F3P|A Chain A, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space Group P21212 Length = 351 | Back alignment and structure |
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 138 | |||
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 99.94 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 99.94 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 99.94 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 99.94 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 99.93 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 99.93 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 99.93 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 99.93 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 99.93 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 99.93 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 99.93 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.93 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 99.92 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 99.92 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.92 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 99.92 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 99.92 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 99.92 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 99.92 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 99.91 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.91 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 99.91 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 99.91 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.91 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 99.91 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 99.91 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.91 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 99.91 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.91 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 99.9 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 99.9 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.9 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 99.9 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 99.9 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 99.9 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 99.9 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 99.9 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 99.89 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.89 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.89 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 99.89 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.89 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.89 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.89 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 99.89 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.89 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.88 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.88 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.88 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.88 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.88 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.88 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 99.88 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 99.88 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.88 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.88 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 99.88 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.88 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 99.88 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.87 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.87 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 99.87 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 99.87 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.87 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.87 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.87 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.87 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.87 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.86 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.86 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.86 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.86 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.86 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.86 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.86 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.86 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.86 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.86 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.85 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.85 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.85 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.85 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.85 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 99.85 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.85 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.85 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.85 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.85 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.85 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 99.85 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.85 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.85 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 99.84 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.84 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.84 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 99.84 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.84 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.84 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.84 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.84 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.83 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.83 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.83 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.83 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.83 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.83 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.83 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 99.82 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.82 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.82 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.82 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.82 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.82 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.82 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.81 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.81 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.8 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.8 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.79 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.79 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.77 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.75 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.73 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.73 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.7 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.67 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.67 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.66 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.62 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.6 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.56 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.56 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.54 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.53 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.5 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.5 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.49 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.48 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.47 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.47 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.45 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.43 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.42 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.41 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.41 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.41 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.4 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.4 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.4 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.39 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.38 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.37 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.36 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.35 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.32 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.32 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.31 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.29 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.28 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.27 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.27 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.24 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.23 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.2 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.19 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.16 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.14 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.13 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.12 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.05 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.01 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 98.99 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 98.98 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 98.98 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 98.95 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 98.95 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 98.94 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 98.92 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 98.91 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 98.9 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 98.86 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 98.83 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 98.8 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 98.77 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 98.76 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 98.74 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 98.74 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 98.74 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 98.73 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 98.72 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 98.72 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 98.68 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 98.67 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 98.64 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 98.63 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 98.62 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 98.59 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 98.55 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 98.5 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 98.49 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 98.48 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 98.47 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 98.42 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 98.41 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 98.4 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 98.37 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 98.34 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 98.31 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 98.28 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 98.25 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 98.24 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 98.24 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 98.23 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 98.2 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 98.18 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 98.17 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 98.11 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 98.02 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 97.99 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 97.95 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 97.91 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 97.9 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 97.89 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 97.84 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 97.8 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 97.78 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 97.75 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 97.7 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 97.67 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 97.62 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 97.61 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 97.5 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 97.49 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 97.44 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 97.35 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 97.35 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 97.31 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 97.28 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 97.14 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 97.1 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 96.87 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 96.86 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 96.81 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 96.63 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 96.62 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 96.57 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 96.53 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 96.53 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 96.52 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 96.47 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 96.44 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 96.18 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 96.15 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 96.14 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 96.13 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 96.08 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 95.92 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 95.89 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 95.79 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 95.75 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 95.74 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 95.74 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 95.7 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 95.63 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 95.54 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 95.28 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 95.15 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 95.02 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 94.99 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 94.63 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 94.3 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 94.19 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 93.95 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 93.77 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 93.47 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 93.43 | |
| 4gq2_M | 950 | Nucleoporin NUP120; beta propeller alpha helical, | 93.41 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 93.14 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 92.92 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 92.32 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 92.1 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 91.97 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 90.59 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 90.25 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 89.97 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 89.46 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 89.41 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 89.16 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 88.85 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 88.01 | |
| 2be1_A | 339 | Serine/threonine-protein kinase/endoribonuclease; | 87.65 | |
| 4gq2_M | 950 | Nucleoporin NUP120; beta propeller alpha helical, | 87.61 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 87.18 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 86.95 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 86.77 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 86.11 | |
| 4fhn_B | 1139 | Nucleoporin NUP120; protein complex,structural pro | 85.53 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 84.08 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 83.84 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 83.54 | |
| 4fhn_B | 1139 | Nucleoporin NUP120; protein complex,structural pro | 83.12 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 83.12 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 82.85 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 82.63 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 82.31 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 82.21 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 81.81 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 81.27 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 80.35 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 80.26 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 80.12 |
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-25 Score=139.03 Aligned_cols=109 Identities=21% Similarity=0.250 Sum_probs=97.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|+.|++||+... ..+..+.. |...|.+++|+|++.++++|+.|++|++||+
T Consensus 21 fsp~~~~l~s~~~dg~v~lWd~~~~---------------~~~~~~~~-~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 21 FHPTEPWVLTTLYSGRVELWNYETQ---------------VEVRSIQV-TETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTT---------------EEEEEEEC-CSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCC---------------ceeEEeec-cCCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 6899999999999999999997433 45677777 8899999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
..+. ....+.+|...|++++|+|+ +.+|++++.|++|++||++++
T Consensus 85 ~~~~----------~~~~~~~h~~~v~~~~~~~~-~~~l~sgs~D~~v~lWd~~~~ 129 (304)
T 2ynn_A 85 NTGE----------KVVDFEAHPDYIRSIAVHPT-KPYVLSGSDDLTVKLWNWENN 129 (304)
T ss_dssp TTCC----------EEEEEECCSSCEEEEEECSS-SSEEEEEETTSCEEEEEGGGT
T ss_pred CCCc----------EEEEEeCCCCcEEEEEEcCC-CCEEEEECCCCeEEEEECCCC
Confidence 8876 44455689999999999999 999999999999999998765
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-25 Score=140.01 Aligned_cols=110 Identities=25% Similarity=0.352 Sum_probs=97.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++||+|+.|+.|++||++.. +++..+.+ |...|.+++|+|++.++++++.|+.|++||+
T Consensus 172 ~spdg~~lasg~~dg~i~iwd~~~~---------------~~~~~~~~-h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~ 235 (321)
T 3ow8_A 172 YSPDGKYLASGAIDGIINIFDIATG---------------KLLHTLEG-HAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 235 (321)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTT---------------EEEEEECC-CSSCCCEEEECTTSCEEEEECTTSCEEEEET
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCC---------------cEEEEEcc-cCCceeEEEEcCCCCEEEEEcCCCeEEEEEC
Confidence 6899999999999999999997433 55778888 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+... ....+.+|...|.+++|+|+ +.+|++++.|+.|++||+++++
T Consensus 236 ~~~~----------~~~~~~~h~~~v~~~~~sp~-~~~l~s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 236 QHAN----------LAGTLSGHASWVLNVAFCPD-DTHFVSSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp TTCC----------EEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTE
T ss_pred CCcc----------eeEEEcCCCCceEEEEECCC-CCEEEEEeCCCcEEEEeCCCCE
Confidence 8765 44455689999999999999 9999999999999999998754
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-24 Score=137.64 Aligned_cols=136 Identities=57% Similarity=1.145 Sum_probs=105.0
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|+|++|++|+.|++|++|+...+..............++++..+.+.|...|.+++|+|++..+++++.|+.|++|+.
T Consensus 202 ~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~ 281 (345)
T 3fm0_A 202 FDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQE 281 (345)
T ss_dssp ECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEE
T ss_pred ECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEe
Confidence 68999999999999999999986554444333334456678888888768889999999999999999999999999998
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
...... ..+..........+|...|++++|+|+...+|++++.|+.|++|+++.++
T Consensus 282 ~~~~~~-~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 282 DPNSDP-QQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPE 337 (345)
T ss_dssp CTTSCT-TSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC--
T ss_pred CCCCCc-ceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCC
Confidence 765421 22222223334457899999999999834699999999999999998764
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=99.94 E-value=4.3e-25 Score=137.93 Aligned_cols=112 Identities=21% Similarity=0.325 Sum_probs=96.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|+.|++||+... +++..+.+ |...|.+++|+|++.++++++.|++|++||+
T Consensus 63 ~~~~~~~l~s~s~d~~i~vwd~~~~---------------~~~~~~~~-h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~ 126 (304)
T 2ynn_A 63 FIARKNWIIVGSDDFRIRVFNYNTG---------------EKVVDFEA-HPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW 126 (304)
T ss_dssp EEGGGTEEEEEETTSEEEEEETTTC---------------CEEEEEEC-CSSCEEEEEECSSSSEEEEEETTSCEEEEEG
T ss_pred EeCCCCEEEEECCCCEEEEEECCCC---------------cEEEEEeC-CCCcEEEEEEcCCCCEEEEECCCCeEEEEEC
Confidence 5789999999999999999997543 44677888 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+... .....+.+|...|.+++|+|.++..|++++.|+.|++||+++..
T Consensus 127 ~~~~---------~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~ 174 (304)
T 2ynn_A 127 ENNW---------ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (304)
T ss_dssp GGTT---------EEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSS
T ss_pred CCCc---------chhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 8654 23344568999999999999548899999999999999997653
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.4e-25 Score=137.93 Aligned_cols=107 Identities=20% Similarity=0.359 Sum_probs=95.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|+.|++||++.. +++..+.+ |...|.+++|+|++.++++++.|++|++||+
T Consensus 214 ~spd~~~l~s~s~dg~i~iwd~~~~---------------~~~~~~~~-h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~ 277 (321)
T 3ow8_A 214 FSPDSQLLVTASDDGYIKIYDVQHA---------------NLAGTLSG-HASWVLNVAFCPDDTHFVSSSSDKSVKVWDV 277 (321)
T ss_dssp ECTTSCEEEEECTTSCEEEEETTTC---------------CEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EcCCCCEEEEEcCCCeEEEEECCCc---------------ceeEEEcC-CCCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 6899999999999999999997543 34677788 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
.... ....+..|...|++++|+|+ +..|++++.|+.|++||+.
T Consensus 278 ~~~~----------~~~~~~~h~~~v~~v~~s~~-g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 278 GTRT----------CVHTFFDHQDQVWGVKYNGN-GSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp TTTE----------EEEEECCCSSCEEEEEECTT-SSEEEEEETTCCEEEEECC
T ss_pred CCCE----------EEEEEcCCCCcEEEEEECCC-CCEEEEEeCCCeEEEEeCC
Confidence 8765 44455689999999999999 9999999999999999974
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-24 Score=137.14 Aligned_cols=114 Identities=20% Similarity=0.336 Sum_probs=93.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|+ +.|++|+.||+|+|||+...... ........+ |...|++++|+|++.+|++|+.|++|++||+
T Consensus 90 ~s~d-~~l~~~s~dg~v~lWd~~~~~~~-----------~~~~~~~~~-H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~ 156 (344)
T 4gqb_B 90 WVGE-RGILVASDSGAVELWELDENETL-----------IVSKFCKYE-HDDIVSTVSVLSSGTQAVSGSKDICIKVWDL 156 (344)
T ss_dssp EETT-TEEEEEETTSEEEEEEECTTSSC-----------EEEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EeCC-CeEEEEECCCEEEEEeccCCCce-----------eEeeccccC-CCCCEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 4666 46889999999999998654321 122234456 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..+. ....+.+|...|++++|+|+...+|++++.|+.|++||+++++
T Consensus 157 ~~~~----------~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~ 203 (344)
T 4gqb_B 157 AQQV----------VLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK 203 (344)
T ss_dssp TTTE----------EEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSS
T ss_pred CCCc----------EEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccc
Confidence 8765 4555668999999999999845688999999999999998765
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.93 E-value=7.5e-25 Score=141.83 Aligned_cols=110 Identities=25% Similarity=0.407 Sum_probs=97.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|++|++||+.... ....+.+ |...|.+++|+|++.++++|+.|++|++||+
T Consensus 116 ~~p~~~~l~s~s~Dg~i~vwd~~~~~---------------~~~~l~~-h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 116 FHPVFSVMVSASEDATIKVWDYETGD---------------FERTLKG-HTDSVQDISFDHSGKLLASCSADMTIKLWDF 179 (410)
T ss_dssp ECSSSSEEEEEESSSCEEEEETTTCC---------------CCEEECC-CSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCc---------------EEEEEec-cCCcEEEEEEcCCCCEEEEEeCCCeEEEEeC
Confidence 68999999999999999999975543 2567788 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.... ......+|...|.+++|+|+ +.++++++.|+.|++||++++.
T Consensus 180 ~~~~----------~~~~~~~h~~~V~~v~~~p~-~~~l~s~s~D~~i~~wd~~~~~ 225 (410)
T 1vyh_C 180 QGFE----------CIRTMHGHDHNVSSVSIMPN-GDHIVSASRDKTIKMWEVQTGY 225 (410)
T ss_dssp TSSC----------EEECCCCCSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTCC
T ss_pred CCCc----------eeEEEcCCCCCEEEEEEeCC-CCEEEEEeCCCeEEEEECCCCc
Confidence 8765 44555689999999999999 9999999999999999998764
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-24 Score=137.42 Aligned_cols=110 Identities=15% Similarity=0.247 Sum_probs=90.2
Q ss_pred Ccc-CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEE
Q psy14817 1 MIQ-TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~-~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~ 78 (138)
|+| ++++|++|+.|+.|++||++.. +++..+.+ |...|++++|+|++. +|++++.|++|++|
T Consensus 222 ~~p~~~~~l~sg~~dg~v~~wd~~~~---------------~~~~~~~~-h~~~v~~v~fsp~g~~~lasgs~D~~i~vw 285 (344)
T 4gqb_B 222 WHPQQSEVFVFGDENGTVSLVDTKST---------------SCVLSSAV-HSQCVTGLVFSPHSVPFLASLSEDCSLAVL 285 (344)
T ss_dssp ECSSCTTEEEEEETTSEEEEEESCC-----------------CCEEEEC-CSSCEEEEEECSSSSCCEEEEETTSCEEEE
T ss_pred ecCCCCcceEEeccCCcEEEEECCCC---------------cEEEEEcC-CCCCEEEEEEccCCCeEEEEEeCCCeEEEE
Confidence 356 5678999999999999997543 34677888 899999999999985 89999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|+..++ ... ..+|...|++++|+|++..+|++++.|++|++|++.++.
T Consensus 286 d~~~~~----------~~~-~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 286 DSSLSE----------LFR-SQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp CTTCCE----------EEE-ECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred ECCCCc----------EEE-EcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 998654 222 358999999999999844578899999999999998754
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-24 Score=135.99 Aligned_cols=113 Identities=33% Similarity=0.664 Sum_probs=93.0
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEe-cCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL-SGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|+|++||+|+.|++|+||++... .+.+...+ .+ |...|.+++|+|++.+|++++.|+++++|+
T Consensus 24 ~sp~g~~las~~~D~~i~iw~~~~~-------------~~~~~~~~~~~-h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~ 89 (345)
T 3fm0_A 24 WNPAGTLLASCGGDRRIRIWGTEGD-------------SWICKSVLSEG-HQRTVRKVAWSPCGNYLASASFDATTCIWK 89 (345)
T ss_dssp ECTTSSCEEEEETTSCEEEEEEETT-------------EEEEEEEECSS-CSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ECCCCCEEEEEcCCCeEEEEEcCCC-------------cceeeeeeccc-cCCcEEEEEECCCCCEEEEEECCCcEEEEE
Confidence 6899999999999999999997432 11222233 45 899999999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+.... . .....+.+|...|.+++|+|+ +++|++++.|+.|++||++.+
T Consensus 90 ~~~~~-------~-~~~~~~~~h~~~v~~v~~sp~-~~~l~s~s~D~~v~iwd~~~~ 137 (345)
T 3fm0_A 90 KNQDD-------F-ECVTTLEGHENEVKSVAWAPS-GNLLATCSRDKSVWVWEVDEE 137 (345)
T ss_dssp ECCC--------E-EEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEEECTT
T ss_pred ccCCC-------e-EEEEEccCCCCCceEEEEeCC-CCEEEEEECCCeEEEEECCCC
Confidence 87643 0 123344589999999999999 999999999999999999764
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=99.93 E-value=7.6e-24 Score=134.23 Aligned_cols=112 Identities=22% Similarity=0.345 Sum_probs=95.7
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
++++|+||+.|++|++||+...... .....+...+.+ |...|.+++|+|++.++++++.|++|++||++.+
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~--------~~~~~~~~~l~~-h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~ 108 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQN--------GYFGIPHKALTG-HNHFVSDLALSQENCFAISSSWDKTLRLWDLRTG 108 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCS--------SBSEEEEEEECC-CSSCEEEEEECSSTTEEEEEETTSEEEEEETTSS
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcc--------cccccccchhcc-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC
Confidence 8899999999999999998653221 122355677888 8999999999999999999999999999999877
Q ss_pred CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 84 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
. ....+.+|...|.+++|+|+ +.+|++++.|+.|++||++.
T Consensus 109 ~----------~~~~~~~h~~~v~~v~~sp~-~~~l~s~~~d~~i~~wd~~~ 149 (343)
T 2xzm_R 109 T----------TYKRFVGHQSEVYSVAFSPD-NRQILSAGAEREIKLWNILG 149 (343)
T ss_dssp C----------EEEEEECCCSCEEEEEECSS-TTEEEEEETTSCEEEEESSS
T ss_pred c----------EEEEEcCCCCcEEEEEECCC-CCEEEEEcCCCEEEEEeccC
Confidence 6 44445689999999999999 99999999999999999863
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.9e-24 Score=135.61 Aligned_cols=120 Identities=25% Similarity=0.433 Sum_probs=91.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|++|++|++..... .....+++..+.+ |...|.+++|+|++.+|++++.|++|++||+
T Consensus 66 ~sp~~~~las~s~D~~v~iw~~~~~~~--------~~~~~~~~~~~~~-h~~~V~~v~~sp~g~~las~s~D~~v~iwd~ 136 (330)
T 2hes_X 66 WRPHTSLLAAGSFDSTVSIWAKEESAD--------RTFEMDLLAIIEG-HENEVKGVAWSNDGYYLATCSRDKSVWIWET 136 (330)
T ss_dssp ECTTSSEEEEEETTSCEEEEEC---------------CCCEEEEEEC-----CEEEEEECTTSCEEEEEETTSCEEEEEC
T ss_pred ECCCCCEEEEEeCCCcEEEEEcccCcC--------ccccceeEEEEcC-CCCcEEEEEECCCCCEEEEEeCCCEEEEEec
Confidence 689999999999999999999753211 0122356777888 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+..... . .....+..|...|.+++|+|+ +.+|++++.|++|++||.+++
T Consensus 137 ~~~~~~-----~-~~~~~~~~h~~~v~~v~~~p~-~~~l~s~s~D~~i~iW~~~~~ 185 (330)
T 2hes_X 137 DESGEE-----Y-ECISVLQEHSQDVKHVIWHPS-EALLASSSYDDTVRIWKDYDD 185 (330)
T ss_dssp CTTCCC-----C-EEEEEECCCSSCEEEEEECSS-SSEEEEEETTSCEEEEEEETT
T ss_pred cCCCCC-----e-EEEEEeccCCCceEEEEECCC-CCEEEEEcCCCeEEEEECCCC
Confidence 533200 0 122334578999999999999 999999999999999998653
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-24 Score=138.69 Aligned_cols=114 Identities=15% Similarity=0.122 Sum_probs=94.1
Q ss_pred CccCCCeEEEeeCCC----cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEE
Q psy14817 1 MIQTGSRLATCSDDA----TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIR 76 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~ 76 (138)
|+|+++++++++.|+ .+++|++..... .......+.+ |...|++++|+|++.+|++|+.|++|+
T Consensus 227 fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~-----------~~~~~~~~~~-~~~~V~~~~~Spdg~~lasgs~D~~V~ 294 (365)
T 4h5i_A 227 FIADDTVLIAASLKKGKGIVLTKISIKSGNT-----------SVLRSKQVTN-RFKGITSMDVDMKGELAVLASNDNSIA 294 (365)
T ss_dssp EEETTEEEEEEEESSSCCEEEEEEEEETTEE-----------EEEEEEEEES-SCSCEEEEEECTTSCEEEEEETTSCEE
T ss_pred EcCCCCEEEEEecCCcceeEEeeccccccee-----------cceeeeeecC-CCCCeEeEEECCCCCceEEEcCCCEEE
Confidence 689999999999888 688888743311 1122445666 788999999999999999999999999
Q ss_pred EEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 77 IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|||+..++ .......+|...|++++|+|+ +++|++++.|++|+|||+...
T Consensus 295 iwd~~~~~---------~~~~~~~gH~~~V~~v~fSpd-g~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 295 LVKLKDLS---------MSKIFKQAHSFAITEVTISPD-STYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEETTTTE---------EEEEETTSSSSCEEEEEECTT-SCEEEEEETTSEEEEEECCTT
T ss_pred EEECCCCc---------EEEEecCcccCCEEEEEECCC-CCEEEEEeCCCeEEEEEcCCC
Confidence 99998765 233445689999999999999 999999999999999998643
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-24 Score=135.28 Aligned_cols=114 Identities=22% Similarity=0.268 Sum_probs=96.7
Q ss_pred CccCC-CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~-~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|++ ++|++|+.|++|++|++..... ....++..+.+ |...|.+++|+|++.++++++.|++|++||
T Consensus 25 ~~~~~~~~l~s~s~D~~v~~W~~~~~~~----------~~~~~~~~~~~-h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd 93 (319)
T 3frx_A 25 TSAGQPNLLLSASRDKTLISWKLTGDDQ----------KFGVPVRSFKG-HSHIVQDCTLTADGAYALSASWDKTLRLWD 93 (319)
T ss_dssp ECSSCTTEEEEEETTSEEEEEEEEEETT----------EEEEEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccCCCccEEEEecCCccEEEecCCCCCc----------cccccceEEeC-CcccEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 46654 8999999999999999854321 12355778888 899999999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+..+. ....+.+|...|.+++|+|+ +.++++++.|++|++||++..
T Consensus 94 ~~~~~----------~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~D~~i~vwd~~~~ 139 (319)
T 3frx_A 94 VATGE----------TYQRFVGHKSDVMSVDIDKK-ASMIISGSRDKTIKVWTIKGQ 139 (319)
T ss_dssp TTTTE----------EEEEEECCSSCEEEEEECTT-SCEEEEEETTSCEEEEETTSC
T ss_pred CCCCC----------eeEEEccCCCcEEEEEEcCC-CCEEEEEeCCCeEEEEECCCC
Confidence 98765 44445689999999999999 999999999999999998753
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-23 Score=130.93 Aligned_cols=110 Identities=29% Similarity=0.553 Sum_probs=96.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|+.|++|+.... +....+.+ |...|.+++|+|++.++++++.|+.|++||+
T Consensus 31 ~s~~~~~l~s~~~dg~i~iw~~~~~---------------~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 31 FSPNGEWLASSSADKLIKIWGAYDG---------------KFEKTISG-HKLGISDVAWSSDSNLLVSASDDKTLKIWDV 94 (312)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTC---------------CEEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ECCCCCEEEEeeCCCeEEEEeCCCc---------------ccchhhcc-CCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence 6899999999999999999997432 33566777 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..+. .......|...|.++.|+|+ +.++++++.|+.|++||+++++
T Consensus 95 ~~~~----------~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~ 140 (312)
T 4ery_A 95 SSGK----------CLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVKTGK 140 (312)
T ss_dssp TTCC----------EEEEEECCSSCEEEEEECSS-SSEEEEEETTSCEEEEETTTCC
T ss_pred CCCc----------EEEEEcCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEECCCCE
Confidence 8766 34445578999999999999 9999999999999999998764
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-23 Score=131.05 Aligned_cols=114 Identities=32% Similarity=0.502 Sum_probs=92.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC--CCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL--TDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~s~~~d~~i~i~ 78 (138)
|+|+|++||+|+.|++|+||++.... .+++..+.+ |...|.+++|++. +.+|++++.|++|++|
T Consensus 17 ~s~~g~~las~s~D~~v~iw~~~~~~-------------~~~~~~l~g-H~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 17 MDYYGKRMATCSSDKTIKIFEVEGET-------------HKLIDTLTG-HEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp ECTTSSEEEEEETTSCEEEEEBCSSC-------------BCCCEEECC-CSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred ECCCCCEEEEEeCCCEEEEEecCCCC-------------cEEEEEEcc-ccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 68999999999999999999975321 133677888 8999999999864 7899999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCC-CCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV-PGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|+..+.. ........|...|.+++|+|+. +.+|++++.|+.|++||++.+
T Consensus 83 d~~~~~~--------~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 83 KEENGRW--------SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp EBSSSCB--------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred EcCCCce--------EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 9986530 0122234688999999999963 679999999999999999765
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-23 Score=131.94 Aligned_cols=115 Identities=27% Similarity=0.476 Sum_probs=94.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++||+|+.|++|++||+.... ...+++..+.+ |...|.+++|+|++.+|++++.|++|++|+.
T Consensus 115 ~sp~g~~las~s~D~~v~iwd~~~~~-----------~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~ 182 (330)
T 2hes_X 115 WSNDGYYLATCSRDKSVWIWETDESG-----------EEYECISVLQE-HSQDVKHVIWHPSEALLASSSYDDTVRIWKD 182 (330)
T ss_dssp ECTTSCEEEEEETTSCEEEEECCTTC-----------CCCEEEEEECC-CSSCEEEEEECSSSSEEEEEETTSCEEEEEE
T ss_pred ECCCCCEEEEEeCCCEEEEEeccCCC-----------CCeEEEEEecc-CCCceEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 68999999999999999999974321 22356777888 8999999999999999999999999999998
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCC-CCEEEEEeCCCcEEEEEcCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV-PGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~d~~v~~wd~~~ 135 (138)
.... . .....+.+|...|++++|+|+. +..|++++.|++|++||++.
T Consensus 183 ~~~~-------~-~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 183 YDDD-------W-ECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp ETTE-------E-EEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred CCCC-------e-eEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecC
Confidence 7542 0 1233456899999999999973 35799999999999999864
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.7e-23 Score=132.36 Aligned_cols=109 Identities=19% Similarity=0.367 Sum_probs=95.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC--CCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL--TDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~s~~~d~~i~i~ 78 (138)
|+|+++.|++++.|++|++||+... +++..+.+ |...|.++.++|. +.++++|+.|+.|++|
T Consensus 162 ~~~~~~~l~t~s~D~~v~lwd~~~~---------------~~~~~~~~-h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~w 225 (354)
T 2pbi_B 162 FTNSDMQILTASGDGTCALWDVESG---------------QLLQSFHG-HGADVLCLDLAPSETGNTFVSGGCDKKAMVW 225 (354)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTC---------------CEEEEEEC-CSSCEEEEEECCCSSCCEEEEEETTSCEEEE
T ss_pred EeCCCCEEEEEeCCCcEEEEeCCCC---------------eEEEEEcC-CCCCeEEEEEEeCCCCCEEEEEeCCCeEEEE
Confidence 5788999999999999999997543 45777888 8999999999884 5799999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|++.+. ....+..|...|++++|+|+ +..|++++.|++|++||++.+
T Consensus 226 d~~~~~----------~~~~~~~h~~~v~~v~~~p~-~~~l~s~s~D~~v~lwd~~~~ 272 (354)
T 2pbi_B 226 DMRSGQ----------CVQAFETHESDVNSVRYYPS-GDAFASGSDDATCRLYDLRAD 272 (354)
T ss_dssp ETTTCC----------EEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTT
T ss_pred ECCCCc----------EEEEecCCCCCeEEEEEeCC-CCEEEEEeCCCeEEEEECCCC
Confidence 999876 44455689999999999999 999999999999999999865
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=99.92 E-value=3.7e-23 Score=129.30 Aligned_cols=110 Identities=26% Similarity=0.449 Sum_probs=96.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|+.|++||+... +++..+.+ |...|.++.|+|++.++++++.|+.|++||+
T Consensus 73 ~~~~~~~l~s~~~d~~i~vwd~~~~---------------~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~ 136 (312)
T 4ery_A 73 WSSDSNLLVSASDDKTLKIWDVSSG---------------KCLKTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 136 (312)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTC---------------CEEEEEEC-CSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred EcCCCCEEEEECCCCEEEEEECCCC---------------cEEEEEcC-CCCCEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence 6899999999999999999997543 34677777 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.+. .......|...|.+++|+|+ +.++++++.|+.|++||+++++
T Consensus 137 ~~~~----------~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~ 182 (312)
T 4ery_A 137 KTGK----------CLKTLPAHSDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQ 182 (312)
T ss_dssp TTCC----------EEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCC
T ss_pred CCCE----------EEEEecCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEECCCCc
Confidence 8765 34445578899999999999 9999999999999999998754
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-23 Score=135.41 Aligned_cols=110 Identities=27% Similarity=0.476 Sum_probs=97.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|++|++||+... +++..+.+ |...|.+++|+|++.++++++.|++|++||+
T Consensus 158 ~~~~~~~l~sgs~D~~i~iwd~~~~---------------~~~~~~~~-h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~ 221 (410)
T 1vyh_C 158 FDHSGKLLASCSADMTIKLWDFQGF---------------ECIRTMHG-HDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 221 (410)
T ss_dssp ECTTSSEEEEEETTSCCCEEETTSS---------------CEEECCCC-CSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred EcCCCCEEEEEeCCCeEEEEeCCCC---------------ceeEEEcC-CCCCEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 5789999999999999999997432 45777888 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..+. ....+.+|...|.++.++|+ +.++++++.|+.|++||+++++
T Consensus 222 ~~~~----------~~~~~~~h~~~v~~~~~~~~-g~~l~s~s~D~~v~vwd~~~~~ 267 (410)
T 1vyh_C 222 QTGY----------CVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTVRVWVVATKE 267 (410)
T ss_dssp TTCC----------EEEEEECCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCC
T ss_pred CCCc----------EEEEEeCCCccEEEEEECCC-CCEEEEEcCCCeEEEEECCCCc
Confidence 8776 44445689999999999999 9999999999999999998754
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-23 Score=133.42 Aligned_cols=109 Identities=17% Similarity=0.249 Sum_probs=90.3
Q ss_pred CccC-CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEE
Q psy14817 1 MIQT-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~-~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~ 78 (138)
|+|+ +.+|++|+.|+.|++||++... ++..+.+ |...|.+++|+|++. +|++++.|++|+||
T Consensus 234 ~sp~~~~~la~g~~d~~i~~wd~~~~~---------------~~~~~~~-~~~~v~~l~~sp~~~~~lasgs~D~~i~iw 297 (357)
T 4g56_B 234 WHPEKDDTFACGDETGNVSLVNIKNPD---------------SAQTSAV-HSQNITGLAYSYHSSPFLASISEDCTVAVL 297 (357)
T ss_dssp ECTTSTTEEEEEESSSCEEEEESSCGG---------------GCEEECC-CSSCEEEEEECSSSSCCEEEEETTSCEEEE
T ss_pred hhhcccceEEEeecccceeEEECCCCc---------------EeEEEec-cceeEEEEEEcCCCCCEEEEEeCCCEEEEE
Confidence 5676 5689999999999999976542 2567777 889999999999885 89999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|++.++ .... .+|...|++++|+|.++.+|++++.|++|++|++...
T Consensus 298 d~~~~~----------~~~~-~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 298 DADFSE----------VFRD-LSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp CTTSCE----------EEEE-CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred ECCCCc----------EeEE-CCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 998764 3333 3799999999999943899999999999999998653
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=131.79 Aligned_cols=114 Identities=32% Similarity=0.535 Sum_probs=93.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec--CCCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH--LTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~s~~~d~~i~i~ 78 (138)
|+|+|++||+|+.|++|++||+.... ..++..+.+ |...|.+++|++ ++.+|++++.|++|++|
T Consensus 21 ~s~~g~~lasgs~D~~v~lwd~~~~~-------------~~~~~~l~g-H~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 21 MDYYGTRLATCSSDRSVKIFDVRNGG-------------QILIADLRG-HEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp ECGGGCEEEEEETTTEEEEEEEETTE-------------EEEEEEEEC-CSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred EcCCCCEEEEEeCCCeEEEEEecCCC-------------cEEEEEEcC-CCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 68999999999999999999985321 134677888 899999999976 47899999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCC-CCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV-PGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|++.+.. .......+|...|++++|+|+. +.+|++++.|+.|++||++.+
T Consensus 87 d~~~~~~--------~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 87 REENGTW--------EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp CCSSSCC--------CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSS
T ss_pred ECCCCcc--------eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCC
Confidence 9986430 0222345789999999999973 578999999999999998764
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.9e-23 Score=139.58 Aligned_cols=110 Identities=24% Similarity=0.372 Sum_probs=94.4
Q ss_pred CccCCC-eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~-~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|+++ .|++|+.|++|++||.. ..+++..+.+ |...|.+++|+|++.++++++.|++|++||
T Consensus 155 f~p~~~~~l~s~s~D~~v~lwd~~---------------~~~~~~~l~~-H~~~V~~v~fspdg~~las~s~D~~i~lwd 218 (611)
T 1nr0_A 155 FKPSRPFRIISGSDDNTVAIFEGP---------------PFKFKSTFGE-HTKFVHSVRYNPDGSLFASTGGDGTIVLYN 218 (611)
T ss_dssp ECSSSSCEEEEEETTSCEEEEETT---------------TBEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ECCCCCeEEEEEeCCCeEEEEECC---------------CCeEeeeecc-ccCceEEEEECCCCCEEEEEECCCcEEEEE
Confidence 678886 59999999999999952 2356778888 899999999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeee-------cccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEH-------RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+..+. ....+ .+|...|.+++|+|+ +.+|++++.|++|++||+++++
T Consensus 219 ~~~g~----------~~~~~~~~~~~~~~h~~~V~~v~~spd-g~~l~s~s~D~~v~lWd~~~~~ 272 (611)
T 1nr0_A 219 GVDGT----------KTGVFEDDSLKNVAHSGSVFGLTWSPD-GTKIASASADKTIKIWNVATLK 272 (611)
T ss_dssp TTTCC----------EEEECBCTTSSSCSSSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTTE
T ss_pred CCCCc----------EeeeeccccccccccCCCEEEEEECCC-CCEEEEEeCCCeEEEEeCCCCc
Confidence 88765 22222 168999999999999 9999999999999999998653
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.6e-23 Score=130.55 Aligned_cols=107 Identities=20% Similarity=0.406 Sum_probs=92.9
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
++++ .+++++.|+.|++||+... +++..+.+ |...|.+++|+|++.++++++.|+.|++||++
T Consensus 152 ~~~~-~l~s~s~d~~i~~wd~~~~---------------~~~~~~~~-h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~ 214 (340)
T 1got_B 152 LDDN-QIVTSSGDTTCALWDIETG---------------QQTTTFTG-HTGDVMSLSLAPDTRLFVSGACDASAKLWDVR 214 (340)
T ss_dssp EETT-EEEEEETTSCEEEEETTTT---------------EEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCC-cEEEEECCCcEEEEECCCC---------------cEEEEEcC-CCCceEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 3444 5899999999999997443 55778888 89999999999999999999999999999998
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.+. ....+..|...|++++|+|+ +.+|++++.|+.|++||++.+
T Consensus 215 ~~~----------~~~~~~~h~~~v~~v~~~p~-~~~l~s~s~d~~v~iwd~~~~ 258 (340)
T 1got_B 215 EGM----------CRQTFTGHESDINAICFFPN-GNAFATGSDDATCRLFDLRAD 258 (340)
T ss_dssp TCS----------EEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTT
T ss_pred CCe----------eEEEEcCCcCCEEEEEEcCC-CCEEEEEcCCCcEEEEECCCC
Confidence 765 44455689999999999999 999999999999999999865
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-24 Score=139.54 Aligned_cols=115 Identities=18% Similarity=0.190 Sum_probs=93.1
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec--------CCCeEEEeeCCC
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH--------LTDLIATACGDD 73 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--------~~~~~~s~~~d~ 73 (138)
++++++||+++.|++|++||...... ....++..+.+ |.+.|.+++|+| ++++|++++.|+
T Consensus 98 ~~~~~~las~~~d~~v~lw~~~~~~~----------~~~~~~~~~~g-H~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 98 PVYSLFLACVCQDNTVRLIITKNETI----------ITQHVLGGKSG-HHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp CEEEEEEEEEETTSCEEEEEEETTEE----------EEEEEECTTTS-CSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCcc----------ceeeeecccCC-CCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 45678899999999999999865421 11233455677 899999999998 778999999999
Q ss_pred cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 74 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 74 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+|+|||+.... .......|...+.+++|+|++..+|++++.|++|++||+++++
T Consensus 167 tv~~Wd~~~~~----------~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~ 220 (393)
T 4gq1_A 167 TLIIWRLTDEG----------PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNL 220 (393)
T ss_dssp EEEEEEEETTE----------EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC
T ss_pred eEEEEECCCCc----------eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCc
Confidence 99999998654 3333347888999999999844689999999999999998764
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.1e-23 Score=130.76 Aligned_cols=106 Identities=21% Similarity=0.246 Sum_probs=89.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC-CCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-HHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|++++|++|+.|++|++||++.. +.+..+.. .+...|.+++|+|++.++++|+.|+.|++||
T Consensus 234 ~~p~~~~l~s~s~d~~v~iwd~~~~---------------~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd 298 (340)
T 1got_B 234 FFPNGNAFATGSDDATCRLFDLRAD---------------QELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWD 298 (340)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTT---------------EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EcCCCCEEEEEcCCCcEEEEECCCC---------------cEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEE
Confidence 6899999999999999999997543 22333332 1345799999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEE
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd 132 (138)
+.... ....+.+|...|++++|+|+ +.+|++++.|+.|++||
T Consensus 299 ~~~~~----------~~~~~~~h~~~v~~~~~s~d-g~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 299 ALKAD----------RAGVLAGHDNRVSCLGVTDD-GMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TTTCC----------EEEEEECCSSCEEEEEECTT-SSCEEEEETTSCEEEEC
T ss_pred cccCc----------EeeEeecCCCcEEEEEEcCC-CCEEEEEcCCccEEecC
Confidence 98765 34445689999999999999 99999999999999996
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.6e-23 Score=131.88 Aligned_cols=115 Identities=14% Similarity=0.251 Sum_probs=90.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC------CccCeEEEEEecCCCeEEEeeCCCc
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH------HGRTIYDISWCHLTDLIATACGDDA 74 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~v~~~~~~~~~~s~~~d~~ 74 (138)
|+|++++|++|+.|++|++||++.. +++..+..+ +...|.+++|+|++.++++|+.|+.
T Consensus 257 ~~p~~~~l~s~s~D~~i~lwd~~~~---------------~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~ 321 (380)
T 3iz6_a 257 FFPDGQRFGTGSDDGTCRLFDMRTG---------------HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGD 321 (380)
T ss_dssp ECTTSSEEEEECSSSCEEEEETTTT---------------EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSC
T ss_pred EecCCCeEEEEcCCCeEEEEECCCC---------------cEEEEecccccccccccCceEEEEECCCCCEEEEEECCCC
Confidence 6899999999999999999998643 233333331 2234889999999999999999999
Q ss_pred EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|++||+.... ... .......+|...|++++|+|+ +.+|++|+.|+.|++|++...+
T Consensus 322 i~vwd~~~~~-----~~~-~~~~~~~~h~~~v~~l~~s~d-g~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 322 CYVWDTLLAE-----MVL-NLGTLQNSHEGRISCLGLSSD-GSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp EEEEETTTCC-----EEE-EECCSCSSCCCCCCEEEECSS-SSEEEEECTTSCEEEEECCSSS
T ss_pred EEEEECCCCc-----eEE-EEecccCCCCCceEEEEECCC-CCEEEEeeCCCCEEEEecCCCc
Confidence 9999988655 000 011122478999999999999 9999999999999999997653
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.91 E-value=9.9e-23 Score=129.06 Aligned_cols=111 Identities=7% Similarity=-0.004 Sum_probs=90.3
Q ss_pred Ccc--CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEE
Q psy14817 1 MIQ--TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~--~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~ 78 (138)
|+| ++++|++|+.|+.|++||++.. +++.....++...+.+++|+|++.++++|+.|+.|++|
T Consensus 133 ~~~~~~~~~l~s~s~dg~i~~wd~~~~---------------~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iw 197 (343)
T 3lrv_A 133 GHNEVNTEYFIWADNRGTIGFQSYEDD---------------SQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVY 197 (343)
T ss_dssp CCC---CCEEEEEETTCCEEEEESSSS---------------CEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEE
T ss_pred cCCCCCCCEEEEEeCCCcEEEEECCCC---------------cEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEE
Confidence 578 8999999999999999997543 22444444356689999999999999999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecc-cccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRA-HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|++.+. .....+.. |...|++++|+|+ +.+|++++ |+.|++||++.++
T Consensus 198 d~~~~~---------~~~~~~~~~h~~~v~~l~fs~~-g~~l~s~~-~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 198 NLSSPD---------QASSRFPVDEEAKIKEVKFADN-GYWMVVEC-DQTVVCFDLRKDV 246 (343)
T ss_dssp ESSCTT---------SCCEECCCCTTSCEEEEEECTT-SSEEEEEE-SSBEEEEETTSST
T ss_pred ECCCCC---------CCccEEeccCCCCEEEEEEeCC-CCEEEEEe-CCeEEEEEcCCCC
Confidence 999776 12123344 8999999999999 99999999 5599999998764
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-22 Score=131.53 Aligned_cols=110 Identities=14% Similarity=0.129 Sum_probs=96.0
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|+.|++||+... ++...+.. |...|.+++|+|++.++++++.|+.|++||+
T Consensus 105 ~~~~~~~l~~~~~dg~i~iwd~~~~---------------~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~ 168 (420)
T 3vl1_A 105 AKLQMRRFILGTTEGDIKVLDSNFN---------------LQREIDQA-HVSEITKLKFFPSGEALISSSQDMQLKIWSV 168 (420)
T ss_dssp ECSSSCEEEEEETTSCEEEECTTSC---------------EEEEETTS-SSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EecCCCEEEEEECCCCEEEEeCCCc---------------ceeeeccc-ccCccEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 4789999999999999999996432 44566667 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..+. ....+..|...|.+++|+|+ +.+|++++.|+.|++||+++++
T Consensus 169 ~~~~----------~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 169 KDGS----------NPRTLIGHRATVTDIAIIDR-GRNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp TTCC----------CCEEEECCSSCEEEEEEETT-TTEEEEEETTSCEEEEETTTTE
T ss_pred CCCc----------CceEEcCCCCcEEEEEEcCC-CCEEEEEcCCCcEEEeECCCCc
Confidence 8765 33444579999999999999 9999999999999999998764
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.9e-22 Score=125.31 Aligned_cols=124 Identities=23% Similarity=0.386 Sum_probs=98.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec--CCCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH--LTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~s~~~d~~i~i~ 78 (138)
|+|++++||+|+.|+.|++|++.... ...+.+..+.+ |...|.+++|+| ++.++++++.|+.|++|
T Consensus 19 ~~~~~~~l~~~~~dg~i~iw~~~~~~-----------~~~~~~~~~~~-~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 19 YDFYGRHVATCSSDQHIKVFKLDKDT-----------SNWELSDSWRA-HDSSIVAIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp ECSSSSEEEEEETTSEEEEEEECSSS-----------CCEEEEEEEEC-CSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred EcCCCCEEEEeeCCCeEEEEECCCCC-----------Ccceecceecc-CCCcEEEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 68999999999999999999986432 22355677777 899999999999 58899999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCC-CCEEEEEeCCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV-PGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|+..+.......... .......|...|.+++|+|+. +.++++++.|+.|++||+++++
T Consensus 87 d~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 87 EEDPDQEECSGRRWN-KLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp EECTTSCTTSSCSEE-EEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred ecCCCcccccccCcc-eeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 998764222111111 223334788999999999974 6789999999999999998764
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.90 E-value=2.1e-22 Score=129.77 Aligned_cols=110 Identities=25% Similarity=0.395 Sum_probs=93.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|+|++|++|+.|+.|++||+... +.+..+.+ |...|.+++|+|++.++++++.|++|++||+
T Consensus 131 ~s~dg~~l~s~~~d~~i~iwd~~~~---------------~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~ 194 (393)
T 1erj_A 131 FSPDGKFLATGAEDRLIRIWDIENR---------------KIVMILQG-HEQDIYSLDYFPSGDKLVSGSGDRTVRIWDL 194 (393)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTT---------------EEEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCC---------------cEEEEEcc-CCCCEEEEEEcCCCCEEEEecCCCcEEEEEC
Confidence 6899999999999999999997432 45677888 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.+. ..... .+...+.+++|+|.++.++++++.|+.|++||+++++
T Consensus 195 ~~~~----------~~~~~-~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~ 240 (393)
T 1erj_A 195 RTGQ----------CSLTL-SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF 240 (393)
T ss_dssp TTTE----------EEEEE-ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCC
T ss_pred CCCe----------eEEEE-EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCc
Confidence 8764 22222 3567899999999439999999999999999988654
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-22 Score=136.12 Aligned_cols=103 Identities=30% Similarity=0.523 Sum_probs=90.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++||+++.|+.|++|+... +++..+.+ |...|++++|+|++++|++++.|+.|++||.
T Consensus 475 ~spd~~~las~~~d~~i~iw~~~~----------------~~~~~~~~-h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 475 FSPDGQTIASASDDKTVKLWNRNG----------------QLLQTLTG-HSSSVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp ECTTSCEEEEEETTSEEEEEETTS----------------CEEEEEEC-CSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred EcCCCCEEEEEeCCCEEEEEcCCC----------------CEEEEEeC-CCCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 689999999999999999999421 34677888 8999999999999999999999999999996
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEE
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd 132 (138)
. ++ ....+.+|...|++++|+|+ +++|++++.|+.|++||
T Consensus 538 ~-~~----------~~~~~~~h~~~v~~~~fs~d-g~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 538 N-GQ----------LLQTLTGHSSSVWGVAFSPD-GQTIASASSDKTVKLWN 577 (577)
T ss_dssp T-SC----------EEEEEECCSSCEEEEEECTT-SSCEEEEETTSCEEEEC
T ss_pred C-CC----------EEEEEcCCCCCEEEEEEcCC-CCEEEEEeCCCEEEEeC
Confidence 4 33 33445689999999999999 99999999999999997
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-22 Score=130.45 Aligned_cols=117 Identities=19% Similarity=0.331 Sum_probs=96.6
Q ss_pred Ccc-CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCC-CeEEEeeCCCcEEEE
Q psy14817 1 MIQ-TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~-~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~-~~~~s~~~d~~i~i~ 78 (138)
|+| ++++|++|+.|+.|++|++....... ...+++..+.+ |...|.+++|+|++ .++++++.|+.|++|
T Consensus 89 ~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~--------~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 159 (402)
T 2aq5_A 89 WCPHNDNVIASGSEDCTVMVWEIPDGGLVL--------PLREPVITLEG-HTKRVGIVAWHPTAQNVLLSAGCDNVILVW 159 (402)
T ss_dssp ECTTCTTEEEEEETTSEEEEEECCTTCCSS--------CBCSCSEEEEC-CSSCEEEEEECSSBTTEEEEEETTSCEEEE
T ss_pred eCCCCCCEEEEEeCCCeEEEEEccCCCCcc--------ccCCceEEecC-CCCeEEEEEECcCCCCEEEEEcCCCEEEEE
Confidence 578 89999999999999999986543211 11123566777 89999999999998 599999999999999
Q ss_pred eccCCCCCCceeeeeeeeeee--cccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEH--RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|+..+. ..... ..|...|.+++|+|+ +.+|++++.|+.|++||+++++
T Consensus 160 d~~~~~----------~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~ 209 (402)
T 2aq5_A 160 DVGTGA----------AVLTLGPDVHPDTIYSVDWSRD-GALICTSCRDKRVRVIEPRKGT 209 (402)
T ss_dssp ETTTTE----------EEEEECTTTCCSCEEEEEECTT-SSCEEEEETTSEEEEEETTTTE
T ss_pred ECCCCC----------ccEEEecCCCCCceEEEEECCC-CCEEEEEecCCcEEEEeCCCCc
Confidence 998765 33333 578899999999998 9999999999999999998764
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=99.90 E-value=3e-22 Score=125.89 Aligned_cols=109 Identities=23% Similarity=0.438 Sum_probs=93.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCC------CeEEEeeCCCc
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT------DLIATACGDDA 74 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~------~~~~s~~~d~~ 74 (138)
|+|++++|++|+.|++|++||++. +++..+.+ |...|.++++.|.. ..+++++.|+.
T Consensus 115 ~~~~~~~l~s~s~D~~i~vwd~~~----------------~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~ 177 (319)
T 3frx_A 115 IDKKASMIISGSRDKTIKVWTIKG----------------QCLATLLG-HNDWVSQVRVVPNEKADDDSVTIISAGNDKM 177 (319)
T ss_dssp ECTTSCEEEEEETTSCEEEEETTS----------------CEEEEECC-CSSCEEEEEECCC------CCEEEEEETTSC
T ss_pred EcCCCCEEEEEeCCCeEEEEECCC----------------CeEEEEec-cCCcEEEEEEccCCCCCCCccEEEEEeCCCE
Confidence 578999999999999999999742 34667777 89999999999854 48999999999
Q ss_pred EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|++||+.... ....+.+|...|++++|+|+ +.+|++++.|+.|++||+++++
T Consensus 178 i~~wd~~~~~----------~~~~~~~h~~~v~~~~~sp~-g~~l~s~~~dg~i~iwd~~~~~ 229 (319)
T 3frx_A 178 VKAWNLNQFQ----------IEADFIGHNSNINTLTASPD-GTLIASAGKDGEIMLWNLAAKK 229 (319)
T ss_dssp EEEEETTTTE----------EEEEECCCCSCEEEEEECTT-SSEEEEEETTCEEEEEETTTTE
T ss_pred EEEEECCcch----------hheeecCCCCcEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCc
Confidence 9999998754 34445689999999999999 9999999999999999998754
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.8e-22 Score=134.01 Aligned_cols=107 Identities=30% Similarity=0.531 Sum_probs=93.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|||+|++||+|+.|++|+|||... +++..+.+ |...|.+++|+|++++|++++.|++|++||.
T Consensus 24 ~spdg~~las~~~d~~v~iWd~~~----------------~~~~~l~g-h~~~V~~l~fspdg~~las~~~d~~i~vWd~ 86 (577)
T 2ymu_A 24 FSPDGQTIASASDDKTVKLWNRNG----------------QLLQTLTG-HSSSVWGVAFSPDGQTIASASDDKTVKLWNR 86 (577)
T ss_dssp ECTTSSCEEEEETTSEEEEECTTS----------------CEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred ECCCCCEEEEEeCCCEEEEEECCC----------------CEEEEEeC-CCCCEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 689999999999999999999421 34678888 8999999999999999999999999999996
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.. . ......+|...|.+++|+|+ +.+|++++.|+.+++|+....
T Consensus 87 ~~-~----------~~~~~~~~~~~v~~~~~s~d-~~~l~~~~~d~~~~~~~~~~~ 130 (577)
T 2ymu_A 87 NG-Q----------LLQTLTGHSSSVRGVAFSPD-GQTIASASDDKTVKLWNRNGQ 130 (577)
T ss_dssp TS-C----------EEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTCC
T ss_pred CC-C----------EEEEEECCCCCEEEEEECCC-CCEEEEEcCCCceeecccccc
Confidence 43 2 33445689999999999999 999999999999999997543
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-22 Score=136.99 Aligned_cols=111 Identities=21% Similarity=0.284 Sum_probs=91.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|+|++||+|+.|+.|++||+... ....+.. .+ |...|.+++|+|+++++++++.|++|++|++
T Consensus 456 ~spdg~~lasgs~D~~v~lwd~~~~-------------~~~~~~~-~~-h~~~v~~v~fspdg~~las~s~d~~v~~w~~ 520 (611)
T 1nr0_A 456 LSNDKQFVAVGGQDSKVHVYKLSGA-------------SVSEVKT-IV-HPAEITSVAFSNNGAFLVATDQSRKVIPYSV 520 (611)
T ss_dssp ECTTSCEEEEEETTSEEEEEEEETT-------------EEEEEEE-EE-CSSCEEEEEECTTSSEEEEEETTSCEEEEEG
T ss_pred EeCCCCEEEEeCCCCeEEEEEccCC-------------ceeeeec-cC-CCCceEEEEECCCCCEEEEEcCCCCEEEEEc
Confidence 5899999999999999999997532 1122333 45 8889999999999999999999999999999
Q ss_pred cC-CCCCCceeeeeeeee-eecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NP-EAGDSDMVSFDLVHT-EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~-~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.. .. .... ....|...|++++|+|+ +++|++++.|++|++||+..+
T Consensus 521 ~~~~~---------~~~~~~~~~H~~~V~~v~fspd-g~~lasgs~D~~v~lW~~~~~ 568 (611)
T 1nr0_A 521 ANNFE---------LAHTNSWTFHTAKVACVSWSPD-NVRLATGSLDNSVIVWNMNKP 568 (611)
T ss_dssp GGTTE---------ESCCCCCCCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTCT
T ss_pred CCCCc---------eeeeeeeeecccceeEEEECCC-CCEEEEEECCCcEEEEECCCc
Confidence 86 22 1111 22348999999999999 999999999999999999764
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-22 Score=128.09 Aligned_cols=106 Identities=18% Similarity=0.203 Sum_probs=88.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC-CCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-HHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|++++|++|+.|++|++||++.. +.+..+.. .+...+.+++|+|++.++++++.|+.|++||
T Consensus 248 ~~p~~~~l~s~s~D~~v~lwd~~~~---------------~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd 312 (354)
T 2pbi_B 248 YYPSGDAFASGSDDATCRLYDLRAD---------------REVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWD 312 (354)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTT---------------EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EeCCCCEEEEEeCCCeEEEEECCCC---------------cEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEE
Confidence 5899999999999999999998543 22333332 1345789999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEE
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd 132 (138)
+..+. ....+.+|...|++++|+|+ +.+|++++.|+.|++|+
T Consensus 313 ~~~~~----------~~~~l~~h~~~v~~l~~spd-g~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 313 VLKGS----------RVSILFGHENRVSTLRVSPD-GTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp TTTCS----------EEEEECCCSSCEEEEEECTT-SSCEEEEETTSEEEEEC
T ss_pred CCCCc----------eEEEEECCCCcEEEEEECCC-CCEEEEEcCCCCEEecC
Confidence 98765 34445689999999999999 99999999999999996
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.90 E-value=2.7e-22 Score=129.25 Aligned_cols=122 Identities=18% Similarity=0.274 Sum_probs=93.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|+.|++||++......... ......+...+.+ |...|.+++|++++.++++++.|+.|++||+
T Consensus 264 ~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~---~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~ 339 (393)
T 1erj_A 264 FTRDGQSVVSGSLDRSVKLWNLQNANNKSDSK---TPNSGTCEVTYIG-HKDFVLSVATTQNDEYILSGSKDRGVLFWDK 339 (393)
T ss_dssp ECTTSSEEEEEETTSEEEEEEC------------------CEEEEEEC-CSSCEEEEEECGGGCEEEEEETTSEEEEEET
T ss_pred ECCCCCEEEEEeCCCEEEEEECCCCCCccccc---CCCCCcceEEEec-ccCcEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 57999999999999999999986543221110 0112345566777 8899999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccC-----CCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV-----VPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
..+. ....+.+|...|.+++|++. ++++|++++.|+.|++|+++..
T Consensus 340 ~~~~----------~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 340 KSGN----------PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp TTCC----------EEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred CCCe----------EEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 8776 44445689999999999862 2789999999999999998754
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.3e-22 Score=135.24 Aligned_cols=113 Identities=19% Similarity=0.272 Sum_probs=94.9
Q ss_pred CccC-CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQT-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~-~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|+ +++|+||+.|++|++|++..... ....+...+.+ |...|.+++|+|++.++++|+.|++|++||
T Consensus 390 ~~~~~~~~l~s~s~D~~i~~W~~~~~~~----------~~~~~~~~~~~-h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd 458 (694)
T 3dm0_A 390 TPIDNADIIVSASRDKSIILWKLTKDDK----------AYGVAQRRLTG-HSHFVEDVVLSSDGQFALSGSWDGELRLWD 458 (694)
T ss_dssp CCTTCCSEEEEEETTSEEEEEECCCSTT----------CSCEEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ecCCCCCEEEEEeCCCcEEEEEccCCCc----------ccccccceecC-CCCcEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 4565 47999999999999999865322 11244566777 899999999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
+..+. ....+.+|...|++++|+|+ +.+|++++.|++|++||...
T Consensus 459 ~~~~~----------~~~~~~~h~~~v~~~~~s~~-~~~l~s~s~D~~i~iwd~~~ 503 (694)
T 3dm0_A 459 LAAGV----------STRRFVGHTKDVLSVAFSLD-NRQIVSASRDRTIKLWNTLG 503 (694)
T ss_dssp TTTTE----------EEEEEECCSSCEEEEEECTT-SSCEEEEETTSCEEEECTTS
T ss_pred CCCCc----------ceeEEeCCCCCEEEEEEeCC-CCEEEEEeCCCEEEEEECCC
Confidence 98765 34445689999999999999 99999999999999999754
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.7e-22 Score=130.65 Aligned_cols=112 Identities=13% Similarity=0.101 Sum_probs=89.1
Q ss_pred Ccc-CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec-CCCeEEEeeCCCcEEEE
Q psy14817 1 MIQ-TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~-~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~s~~~d~~i~i~ 78 (138)
|+| ++++||+|+.||.|+|||+..... .....+.+ |.+.|++|+|+| ++.+|++++.|++|++|
T Consensus 127 ~~P~~~~~lasGs~dg~i~lWd~~~~~~-------------~~~~~~~g-H~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 127 WHPTHPSTVAVGSKGGDIMLWNFGIKDK-------------PTFIKGIG-AGGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp ECSSCTTCEEEEETTSCEEEECSSCCSC-------------CEEECCCS-SSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred EeCCCCCEEEEEeCCCEEEEEECCCCCc-------------eeEEEccC-CCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 577 567999999999999999854432 23455667 899999999998 56799999999999999
Q ss_pred eccCCCCCCceeeeeeeeeee--cccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEH--RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|++... ..... ..+...+.+++|+|+ +.+|++|+.|+.|++||++...
T Consensus 193 d~~~~~----------~~~~~~~~~~~~~~~~~~~~~~-~~~l~~g~~dg~i~~wd~~~~~ 242 (435)
T 4e54_B 193 DFKGNI----------LRVFASSDTINIWFCSLDVSAS-SRMVVTGDNVGNVILLNMDGKE 242 (435)
T ss_dssp ETTSCE----------EEEEECCSSCSCCCCCEEEETT-TTEEEEECSSSBEEEEESSSCB
T ss_pred eccCCc----------eeEEeccCCCCccEEEEEECCC-CCEEEEEeCCCcEeeeccCcce
Confidence 997543 11111 233456789999999 9999999999999999997654
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.9e-22 Score=125.29 Aligned_cols=111 Identities=19% Similarity=0.328 Sum_probs=93.4
Q ss_pred CccC---CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEE
Q psy14817 1 MIQT---GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~---~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i 77 (138)
|+|+ |++|++|+.|+.|++|++..... .....+.+ |...|.+++|+|++.++++++.|+.|++
T Consensus 47 ~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~-------------~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~dg~v~i 112 (368)
T 3mmy_A 47 FSPPTLPGNFLIAGSWANDVRCWEVQDSGQ-------------TIPKAQQM-HTGPVLDVCWSDDGSKVFTASCDKTAKM 112 (368)
T ss_dssp ECCTTSSSEEEEEEETTSEEEEEEECTTSC-------------EEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EcCCCCCceEEEEECCCCcEEEEEcCCCCc-------------eeEEEecc-ccCCEEEEEECcCCCEEEEEcCCCcEEE
Confidence 5677 69999999999999999864222 23356666 8999999999999999999999999999
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEEE--ccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW--NPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
||+.... ... ...|...|++++| +|+ +.+|++++.|+.|++||+++++
T Consensus 113 wd~~~~~----------~~~-~~~~~~~v~~~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 113 WDLSSNQ----------AIQ-IAQHDAPVKTIHWIKAPN-YSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp EETTTTE----------EEE-EEECSSCEEEEEEEECSS-CEEEEEEETTSEEEEECSSCSS
T ss_pred EEcCCCC----------cee-eccccCceEEEEEEeCCC-CCEEEEccCCCcEEEEECCCCc
Confidence 9998764 222 3468899999999 787 8899999999999999998765
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.9e-22 Score=126.57 Aligned_cols=109 Identities=20% Similarity=0.277 Sum_probs=89.2
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccC
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 82 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~ 82 (138)
+++++|++|+.|++|++||++... .++..+.+ |...|.+++|+|++.++++++.|++|++||++.
T Consensus 216 ~~~~~l~sgs~D~~v~~wd~~~~~--------------~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~ 280 (380)
T 3iz6_a 216 LNANMFISGSCDTTVRLWDLRITS--------------RAVRTYHG-HEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRT 280 (380)
T ss_dssp SSCCEEEEEETTSCEEEEETTTTC--------------CCCEEECC-CSSCCCEEEECTTSSEEEEECSSSCEEEEETTT
T ss_pred CCCCEEEEEECCCeEEEEECCCCC--------------cceEEECC-cCCCeEEEEEecCCCeEEEEcCCCeEEEEECCC
Confidence 478999999999999999986332 22567777 899999999999999999999999999999987
Q ss_pred CCCCCceeeeeeeeeeec-------ccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 83 EAGDSDMVSFDLVHTEHR-------AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+. ...... .+...|++++|+|+ +.++++++.|+.|++||+..++
T Consensus 281 ~~----------~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~g~~dg~i~vwd~~~~~ 331 (380)
T 3iz6_a 281 GH----------QLQVYNREPDRNDNELPIVTSVAFSIS-GRLLFAGYSNGDCYVWDTLLAE 331 (380)
T ss_dssp TE----------EEEEECCCCSSSCCSSCSCSEEEECSS-SSEEEEECTTSCEEEEETTTCC
T ss_pred Cc----------EEEEecccccccccccCceEEEEECCC-CCEEEEEECCCCEEEEECCCCc
Confidence 64 111111 12235899999999 9999999999999999987653
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.9e-22 Score=140.31 Aligned_cols=123 Identities=15% Similarity=0.156 Sum_probs=92.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEec-----CCCccCeEEEEEecCCCeEEEeeCCCcE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-----GHHGRTIYDISWCHLTDLIATACGDDAI 75 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~v~~~~~~~~~~s~~~d~~i 75 (138)
|+|++++||||+.|++|++||+........ ... ...+. + |...|.+|+|+|++++|++|+.|++|
T Consensus 443 ~spdg~~laSgs~DgtVrlWd~~~g~~~~~-------~~~--~~~l~~~~~~~-h~~~V~svafspdg~~LAsgs~DgtV 512 (902)
T 2oaj_A 443 PAEYGTAFITGHSNGSVRIYDASHGDIQDN-------ASF--EVNLSRTLNKA-KELAVDKISFAAETLELAVSIETGDV 512 (902)
T ss_dssp CCSEEEEEEEEETTSEEEEEESSCCTTTTT-------BCE--EEEHHHHTTCS-SSCCEEEEEEETTTTEEEEEETTSCE
T ss_pred ccccCcEEEEecCCCcEEEEECCCccccCC-------ceE--EeechhhcCCC-CCCceeEEEecCCCCeEEEEecCcEE
Confidence 579999999999999999999866522100 000 01111 5 78899999999999999999999999
Q ss_pred EEEeccCCCCCC--------c----------------------------eeeeeeeeeeecccccceeEEEEccCCCCEE
Q psy14817 76 RIFKENPEAGDS--------D----------------------------MVSFDLVHTEHRAHNQDVNCVAWNPVVPGML 119 (138)
Q Consensus 76 ~i~~~~~~~~~~--------~----------------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 119 (138)
++|++....... . ...+. +...+..|...|++++|+|+ + +|
T Consensus 513 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~l~~h~~~V~svafSpd-G-~l 589 (902)
T 2oaj_A 513 VLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFM-PSTAVHANKGKTSAINNSNI-G-FV 589 (902)
T ss_dssp EEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEE-EEEEECCCSCSEEEEEECBT-S-EE
T ss_pred EEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccc-eeEEEEcCCCcEEEEEecCC-c-EE
Confidence 999998652100 0 00011 23344579999999999999 8 99
Q ss_pred EEEeCCCcEEEEEcCCC
Q psy14817 120 ASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 120 ~~~~~d~~v~~wd~~~~ 136 (138)
++|+.|++|++||++++
T Consensus 590 Asgs~D~tv~lwd~~~~ 606 (902)
T 2oaj_A 590 GIAYAAGSLMLIDRRGP 606 (902)
T ss_dssp EEEETTSEEEEEETTTT
T ss_pred EEEeCCCcEEEEECCCC
Confidence 99999999999998765
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-21 Score=124.89 Aligned_cols=119 Identities=20% Similarity=0.226 Sum_probs=87.3
Q ss_pred CeEEE--eeCCCcEEEeeccCCCCCCCccCCCCCCceEE-eEEecCCCccCeEEEEEecCCCeEEEeeCCCc-EEEEecc
Q psy14817 6 SRLAT--CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC-VCTLSGHHGRTIYDISWCHLTDLIATACGDDA-IRIFKEN 81 (138)
Q Consensus 6 ~~l~t--~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~-i~i~~~~ 81 (138)
++++. |+.||.|++||+...................+ +..+.+ |...|.+++|+|++.++++++.|++ |++||++
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~-h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~ 226 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKA-HTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTE 226 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC------------------CCEEECC-CSSCEEEEEECTTSSEEEEEETTCSEEEEEETT
T ss_pred cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEc-cCCceEEEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 34554 68999999999865431111000000111223 667788 8999999999999999999999998 9999999
Q ss_pred CCCCCCceeeeeeeeeeec-c-cccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHR-A-HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.+. ....+. + |...|++++|+|+ +.+|++++.|++|++||++.+
T Consensus 227 ~~~----------~~~~~~~g~h~~~v~~~~~s~~-~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 227 DGV----------LVREFRRGLDRADVVDMKWSTD-GSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp TCC----------EEEEEECTTCCSCEEEEEECTT-SCEEEEEETTCEEEEEESSCC
T ss_pred CCc----------EEEEEEcCCCCCcEEEEEECCC-CCEEEEEECCCEEEEEEccCC
Confidence 776 333333 4 8899999999999 999999999999999999764
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-21 Score=121.02 Aligned_cols=112 Identities=22% Similarity=0.383 Sum_probs=88.8
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCC---CeEEEeeCCCcEEEEecc
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT---DLIATACGDDAIRIFKEN 81 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~---~~~~s~~~d~~i~i~~~~ 81 (138)
+++|++|+.|++|++||++... ..+.....+.+ |...|.+++|+|++ .++++++.|++|++|+++
T Consensus 170 ~~~l~sgs~D~~v~lwd~~~~~-----------~~~~~~~~l~~-H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~ 237 (297)
T 2pm7_B 170 SRKFVTGGADNLVKIWKYNSDA-----------QTYVLESTLEG-HSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQD 237 (297)
T ss_dssp CCEEEEEETTSCEEEEEEETTT-----------TEEEEEEEECC-CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred cceEEEEcCCCcEEEEEEcCCC-----------ceEEEEEEecC-CCCceEEEEECCCCCCceEEEEEECCCcEEEEEeC
Confidence 6799999999999999986432 22345667888 89999999999985 699999999999999997
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
..... ... .......|...|++++|+|+ +++|++++.|+.|++|+..
T Consensus 238 ~~~~~---~~~--~~~~~~~~~~~v~~~~~s~~-g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 238 NEQGP---WKK--TLLKEEKFPDVLWRASWSLS-GNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp STTSC---CEE--EESSSSCCSSCEEEEEECSS-SCCEEEEETTSCEEEEEEC
T ss_pred CCCCc---cce--eeeecccCCCcEEEEEECCC-CCEEEEEcCCCcEEEEEEC
Confidence 64311 000 01111356789999999999 9999999999999999976
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=99.89 E-value=9.8e-22 Score=125.30 Aligned_cols=113 Identities=18% Similarity=0.333 Sum_probs=93.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~ 79 (138)
|+|++++|++|+.|+.|++||+... +++..+.+ |...|.+++|++++. ++++++.|+.|++||
T Consensus 147 ~spdg~~l~sgs~dg~v~iwd~~~~---------------~~~~~~~~-h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd 210 (357)
T 4g56_B 147 VFSDGTQAVSGGKDFSVKVWDLSQK---------------AVLKSYNA-HSSEVNCVAACPGKDTIFLSCGEDGRILLWD 210 (357)
T ss_dssp ECSSSSEEEEEETTSCEEEEETTTT---------------EEEEEECC-CSSCEEEEEECTTCSSCEEEEETTSCEEECC
T ss_pred ECCCCCEEEEEeCCCeEEEEECCCC---------------cEEEEEcC-CCCCEEEEEEccCCCceeeeeccCCceEEEE
Confidence 6899999999999999999996433 56778888 899999999999986 889999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
++.+.. ........+...+.+++|+|+.+.+|++++.|+.|++||+++++
T Consensus 211 ~~~~~~--------~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~ 260 (357)
T 4g56_B 211 TRKPKP--------ATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPD 260 (357)
T ss_dssp TTSSSC--------BCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGG
T ss_pred CCCCce--------eeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCc
Confidence 987650 01112235667899999999856789999999999999998764
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.89 E-value=9.2e-22 Score=124.72 Aligned_cols=105 Identities=20% Similarity=0.431 Sum_probs=90.8
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec-CCCeEEEeeCCCcEEEEeccCC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
+++|++|+.|+.|++||+... +.+..+.+ |...|.+++|+| ++.++++++.|+.|++||++.+
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~~---------------~~~~~~~~-~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 148 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPITM---------------QCIKHYVG-HGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD 148 (366)
T ss_dssp CEEEEEEETTCEEEEECTTTC---------------CEEEEEES-CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTT
T ss_pred CCEEEEecCCCEEEEEEchhc---------------eEeeeecC-CCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecC
Confidence 679999999999999997543 34667777 899999999999 8889999999999999999876
Q ss_pred CCCCceeeeeeeeeee---cccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 84 AGDSDMVSFDLVHTEH---RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
. ..... ..|...|.+++|+|+ +.+|++++.|+.|++||++++
T Consensus 149 ~----------~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~ 193 (366)
T 3k26_A 149 T----------LVAIFGGVEGHRDEVLSADYDLL-GEKIMSCGMDHSLKLWRINSK 193 (366)
T ss_dssp E----------EEEEECSTTSCSSCEEEEEECTT-SSEEEEEETTSCEEEEESCSH
T ss_pred e----------EEEEecccccccCceeEEEECCC-CCEEEEecCCCCEEEEECCCC
Confidence 4 22222 478899999999998 999999999999999999864
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-21 Score=123.41 Aligned_cols=59 Identities=14% Similarity=0.157 Sum_probs=44.8
Q ss_pred eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeeccccccee-EEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVN-CVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 65 ~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
++++++.|++|+|||+..++ ....+.+|...+. .++|+|+ +++|++|+.|++|++||+.
T Consensus 297 ~lASgS~DgTIkIWDl~tGk----------~l~tL~gH~~~vvs~vafSPD-G~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 297 CAAAILTSGTIAIWDLLLGQ----------CTALLPPVSDQHWSFVKWSGT-DSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp EEEEEETTSCEEEEETTTCS----------EEEEECCC--CCCCEEEECSS-SSEEEEECTTSCEEEEEEC
T ss_pred EEEEEcCCCcEEEEECCCCc----------EEEEecCCCCCeEEEEEECCC-CCEEEEEECCCcEEEecCC
Confidence 46677777777788777765 4445556776555 5899999 9999999999999999963
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.8e-21 Score=121.41 Aligned_cols=134 Identities=31% Similarity=0.559 Sum_probs=98.4
Q ss_pred CccC--CCeEEEeeCCCcEEEeeccCCCCCCCccC-----------------------------C---------------
Q psy14817 1 MIQT--GSRLATCSDDATVKIWKEYKPGNSAGIPT-----------------------------P--------------- 34 (138)
Q Consensus 1 ~s~~--~~~l~t~s~d~~v~iw~~~~~~~~~~~~~-----------------------------~--------------- 34 (138)
|+|+ +++|++++.|+.|++||++.......... .
T Consensus 118 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~ 197 (351)
T 3f3f_A 118 FAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQ 197 (351)
T ss_dssp ECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEE
T ss_pred EcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEE
Confidence 5677 99999999999999999876543221100 0
Q ss_pred -CCCCceEEeEEecCCCccCeEEEEEecCC----CeEEEeeCCCcEEEEeccCCCCCC----------------------
Q psy14817 35 -DNDSVWKCVCTLSGHHGRTIYDISWCHLT----DLIATACGDDAIRIFKENPEAGDS---------------------- 87 (138)
Q Consensus 35 -~~~~~~~~~~~~~~~~~~~v~~v~~~~~~----~~~~s~~~d~~i~i~~~~~~~~~~---------------------- 87 (138)
.......++..+.+ |...|.+++|+|++ .++++++.|+.|++||++......
T Consensus 198 ~~~~~~~~~~~~~~~-h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (351)
T 3f3f_A 198 RGKDGKLHVAAKLPG-HKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDA 276 (351)
T ss_dssp ECTTSCEEEEEECCC-CCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-------------------------
T ss_pred ccCCCceeeeeecCC-CCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCccccccc
Confidence 00112234566666 88999999999998 799999999999999998642100
Q ss_pred ---------------ceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 88 ---------------DMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 88 ---------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..... .......+|...|++++|+|+ +++|++++.|+.|++|++..++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 277 QGRSDSNTEEKAELQSNLQV-ELLSEHDDHNGEVWSVSWNLT-GTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp --------------CCSEEE-EEEEEECTTSSCEEEEEECSS-SCCEEEEETTSCEEEEEECTTS
T ss_pred ccccccccceeeeecccccc-cEEEEEecccccEEEEEEcCC-CCEEEEecCCCcEEEEecCcCc
Confidence 00011 123344578899999999999 9999999999999999998764
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.88 E-value=8.5e-22 Score=125.79 Aligned_cols=114 Identities=19% Similarity=0.326 Sum_probs=87.0
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++++.|+.|++||+..... +.+...+.. |...|.+++|+|++.++++++.|+.|++||+
T Consensus 63 ~s~~~~~l~s~s~d~~v~vwd~~~~~~------------~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 129 (377)
T 3dwl_C 63 WAPKSNRIVTCSQDRNAYVYEKRPDGT------------WKQTLVLLR-LNRAATFVRWSPNEDKFAVGSGARVISVCYF 129 (377)
T ss_dssp ECTTTCCEEEEETTSSEEEC------C------------CCCEEECCC-CSSCEEEEECCTTSSCCEEEESSSCEEECCC
T ss_pred EeCCCCEEEEEeCCCeEEEEEcCCCCc------------eeeeeEecc-cCCceEEEEECCCCCEEEEEecCCeEEEEEE
Confidence 689999999999999999999865431 123556666 8899999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecc-cccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRA-HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
+.... .. ....... |...|++++|+|+ +.+|++++.|+.|++||++.
T Consensus 130 ~~~~~------~~-~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~ 177 (377)
T 3dwl_C 130 EQEND------WW-VSKHLKRPLRSTILSLDWHPN-NVLLAAGCADRKAYVLSAYV 177 (377)
T ss_dssp -----------CC-CCEEECSSCCSCEEEEEECTT-SSEEEEEESSSCEEEEEECC
T ss_pred CCccc------ce-eeeEeecccCCCeEEEEEcCC-CCEEEEEeCCCEEEEEEEEe
Confidence 86540 00 1222234 8899999999999 99999999999999999863
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.3e-22 Score=129.69 Aligned_cols=112 Identities=14% Similarity=0.223 Sum_probs=92.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~ 79 (138)
|+|++++|++|+.||.|++||++.. .+..+.+ |...|.+++|+|++. ++++++.|+.|++||
T Consensus 217 ~~~~~~~l~~g~~dg~i~~wd~~~~----------------~~~~~~~-h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd 279 (435)
T 4e54_B 217 VSASSRMVVTGDNVGNVILLNMDGK----------------ELWNLRM-HKKKVTHVALNPCCDWFLATASVDQTVKIWD 279 (435)
T ss_dssp EETTTTEEEEECSSSBEEEEESSSC----------------BCCCSBC-CSSCEEEEEECTTCSSEEEEEETTSBCCEEE
T ss_pred ECCCCCEEEEEeCCCcEeeeccCcc----------------eeEEEec-ccceEEeeeecCCCceEEEEecCcceeeEEe
Confidence 5789999999999999999997432 2455667 899999999999987 788999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
++...... ......+|...|++++|+|+ +.+|++++.|+.|++||++++.
T Consensus 280 ~~~~~~~~-------~~~~~~~h~~~v~~~~~spd-g~~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 280 LRQVRGKA-------SFLYSLPHRHPVNAACFSPD-GARLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp TTTCCSSS-------CCSBCCBCSSCEEECCBCTT-SSEEEEEESSSCEEEEESSSSS
T ss_pred cccccccc-------eEEEeeeccccccceeECCC-CCeeEEEcCCCEEEEEECCCCc
Confidence 98654110 11122468899999999999 9999999999999999998754
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.9e-21 Score=123.08 Aligned_cols=112 Identities=14% Similarity=0.165 Sum_probs=93.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~ 79 (138)
|+|++++|++|+.|+.|++||++. +++..+.. |...|.+++|+|++. ++++++.|+.|++||
T Consensus 171 ~~~~~~~l~~~~~d~~i~i~d~~~----------------~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 233 (383)
T 3ei3_B 171 VSVSRQMLATGDSTGRLLLLGLDG----------------HEIFKEKL-HKAKVTHAEFNPRCDWLMATSSVDATVKLWD 233 (383)
T ss_dssp EETTTTEEEEEETTSEEEEEETTS----------------CEEEEEEC-SSSCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred ECCCCCEEEEECCCCCEEEEECCC----------------CEEEEecc-CCCcEEEEEECCCCCCEEEEEeCCCEEEEEe
Confidence 578999999999999999999731 34667777 899999999999999 999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEcc-CCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP-VVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
++....... ..... .|...|.+++|+| + +.+|++++.|+.|++||+++++
T Consensus 234 ~~~~~~~~~------~~~~~-~~~~~v~~~~~s~~~-~~~l~~~~~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 234 LRNIKDKNS------YIAEM-PHEKPVNAAYFNPTD-STKLLTTDQRNEIRVYSSYDWS 284 (383)
T ss_dssp GGGCCSTTC------EEEEE-ECSSCEEEEEECTTT-SCEEEEEESSSEEEEEETTBTT
T ss_pred CCCCCcccc------eEEEe-cCCCceEEEEEcCCC-CCEEEEEcCCCcEEEEECCCCc
Confidence 997431100 22222 6889999999999 8 9999999999999999998754
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-21 Score=122.82 Aligned_cols=110 Identities=25% Similarity=0.418 Sum_probs=88.0
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCC----CeEEEeeCCCcEEEEec
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT----DLIATACGDDAIRIFKE 80 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~----~~~~s~~~d~~i~i~~~ 80 (138)
+++|++|+.|+.|++||++.. ..++++..+.+ |...|.+++|+|++ .+|++++.|++|++|++
T Consensus 179 ~~~l~sgs~D~~v~lWd~~~~------------~~~~~~~~l~~-h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~ 245 (316)
T 3bg1_A 179 IKRFASGGCDNLIKLWKEEED------------GQWKEEQKLEA-HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTC 245 (316)
T ss_dssp CCBEECCBTTSBCCEEEECTT------------SCEEEEECCBC-CSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEEC
T ss_pred cceEEEecCCCeEEEEEeCCC------------Cccceeeeccc-CCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEc
Confidence 579999999999999997432 12355677888 89999999999986 68999999999999998
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
....... ........|...|++++|+|+ +.+|++++.|+.|++|+..
T Consensus 246 ~~~~~~~------~~~~~~~~~~~~v~~v~~sp~-g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 246 DDASSNT------WSPKLLHKFNDVVWHVSWSIT-ANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp SSTTCCC------CBCCEEEECSSCEEEEEECTT-TCCEEEEESSSCEEEEEEC
T ss_pred cCccccc------hhhhhhhcCCCcEEEEEEcCC-CCEEEEEcCCCeEEEEEEC
Confidence 7532000 011122357889999999999 9999999999999999975
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=99.88 E-value=4.5e-21 Score=121.53 Aligned_cols=109 Identities=22% Similarity=0.407 Sum_probs=90.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++.++++|+.|++|++||++.. +++..+.+ |...|.+++|+|++.++++++.|+.|++||+
T Consensus 84 ~~~~~~~l~s~s~D~~v~lwd~~~~---------------~~~~~~~~-h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~ 147 (343)
T 2xzm_R 84 LSQENCFAISSSWDKTLRLWDLRTG---------------TTYKRFVG-HQSEVYSVAFSPDNRQILSAGAEREIKLWNI 147 (343)
T ss_dssp ECSSTTEEEEEETTSEEEEEETTSS---------------CEEEEEEC-CCSCEEEEEECSSTTEEEEEETTSCEEEEES
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCC---------------cEEEEEcC-CCCcEEEEEECCCCCEEEEEcCCCEEEEEec
Confidence 5789999999999999999997543 34677788 8999999999999999999999999999998
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCC----------CEEEEEeCCCcEEEEEcC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP----------GMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----------~~l~~~~~d~~v~~wd~~ 134 (138)
.... .........|...|.+++|+|+ . .++++++.|+.|++||.+
T Consensus 148 ~~~~--------~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 202 (343)
T 2xzm_R 148 LGEC--------KFSSAEKENHSDWVSCVRYSPI-MKSANKVQPFAPYFASVGWDGRLKVWNTN 202 (343)
T ss_dssp SSCE--------EEECCTTTSCSSCEEEEEECCC-CCSCSCCCSSCCEEEEEETTSEEEEEETT
T ss_pred cCCc--------eeeeecccCCCceeeeeeeccc-cccccccCCCCCEEEEEcCCCEEEEEcCC
Confidence 7321 0011112367889999999997 5 789999999999999954
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=99.88 E-value=2.3e-21 Score=122.02 Aligned_cols=117 Identities=21% Similarity=0.339 Sum_probs=85.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|+.|++||++.. +++..+.. ...+.++.|+|++.++ +++.|+.|++||+
T Consensus 223 ~s~~~~~l~s~s~Dg~i~iwd~~~~---------------~~~~~~~~--~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~ 284 (340)
T 4aow_A 223 VSPDGSLCASGGKDGQAMLWDLNEG---------------KHLYTLDG--GDIINALCFSPNRYWL-CAATGPSIKIWDL 284 (340)
T ss_dssp ECTTSSEEEEEETTCEEEEEETTTT---------------EEEEEEEC--SSCEEEEEECSSSSEE-EEEETTEEEEEET
T ss_pred ECCCCCEEEEEeCCCeEEEEEeccC---------------ceeeeecC--CceEEeeecCCCCcee-eccCCCEEEEEEC
Confidence 5899999999999999999997543 44666654 5689999999977654 5567899999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+..... ..............|...|++++|+|+ +++|++|+.|+.|++||+++|+
T Consensus 285 ~~~~~~-~~~~~~~~~~~~~~h~~~v~~l~~s~d-g~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 285 EGKIIV-DELKQEVISTSSKAEPPQCTSLAWSAD-GQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp TTTEEE-EEECCC-------CCCCCEEEEEECTT-SSEEEEEETTSCEEEEEEEC--
T ss_pred CCCeEE-EeccccceeeeccCCCCCEEEEEECCC-CCEEEEEeCCCEEEEEeCCCcC
Confidence 865300 000001111223468889999999999 9999999999999999998874
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.88 E-value=5e-21 Score=121.84 Aligned_cols=114 Identities=32% Similarity=0.497 Sum_probs=95.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC--CCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL--TDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~s~~~d~~i~i~ 78 (138)
|+|++++||+|+.|+.|++|++.. ...+.+..+.+ |...|.+++|+++ +.++++++.|+.|++|
T Consensus 19 ~s~~~~~l~~~~~dg~i~iw~~~~-------------~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw 84 (379)
T 3jrp_A 19 LDYYGKRLATCSSDKTIKIFEVEG-------------ETHKLIDTLTG-HEGPVWRVDWAHPKFGTILASCSYDGKVLIW 84 (379)
T ss_dssp ECSSSSEEEEEETTSCEEEEEEET-------------TEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred EcCCCCEEEEEECCCcEEEEecCC-------------CcceeeeEecC-CCCcEEEEEeCCCCCCCEEEEeccCCEEEEE
Confidence 689999999999999999999842 23466777888 8999999999977 8899999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCC-CCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV-PGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|+..+. .........|...|.+++|+|+. +.++++++.|+.|++||++..
T Consensus 85 d~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 85 KEENGR--------WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp EEETTE--------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTT
T ss_pred EcCCCc--------eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCC
Confidence 998653 01223334688999999999974 679999999999999999876
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-22 Score=134.63 Aligned_cols=109 Identities=10% Similarity=0.096 Sum_probs=89.0
Q ss_pred CccCC-CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCc--cCeEEEEEecCCCeEEEeeCCCcEEE
Q psy14817 1 MIQTG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG--RTIYDISWCHLTDLIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~~-~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~v~~~~~~~~~~s~~~d~~i~i 77 (138)
|+|+| ++|||||.|++|+|||++.... ...+.+ |. ..|.+++|+|+++.+++++.|++|++
T Consensus 318 ~s~~g~~~laS~S~D~tvklWD~~~~~~---------------~~~~~~-~~~~~~v~~v~fsp~~~~l~s~~~d~tv~l 381 (524)
T 2j04_B 318 YSDFEDTVVSTVAVDGYFYIFNPKDIAT---------------TKTTVS-RFRGSNLVPVVYCPQIYSYIYSDGASSLRA 381 (524)
T ss_dssp CCTTSCCEEEEEETTSEEEEECGGGHHH---------------HCEEEE-ECSCCSCCCEEEETTTTEEEEECSSSEEEE
T ss_pred cCCCCCeEEEEeccCCeEEEEECCCCCc---------------cccccc-ccccCcccceEeCCCcCeEEEeCCCCcEEE
Confidence 57787 8999999999999999865322 223333 32 35789999999999999999999999
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
||++... ....+.+|...|++++|+|+ +.+|++|+.|++|++||+..+
T Consensus 382 wd~~~~~----------~~~~l~gH~~~V~sva~Sp~-g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 382 VPSRAAF----------AVHPLVSRETTITAIGVSRL-HPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp EETTCTT----------CCEEEEECSSCEEEEECCSS-CCBCEEEETTTEEECCBSCSS
T ss_pred EECcccc----------cceeeecCCCceEEEEeCCC-CCeEEEEECCCEEEEEechHh
Confidence 9998765 33334579999999999999 999999999999999997653
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=99.88 E-value=8.1e-21 Score=119.19 Aligned_cols=112 Identities=15% Similarity=0.356 Sum_probs=95.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++++.|+.|++||+..... .....+.. |...+.+++|+|++.++++++.|+.|++||+
T Consensus 105 ~~~~~~~l~~~~~d~~i~~~d~~~~~~-------------~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~ 170 (337)
T 1gxr_A 105 LLPDGCTLIVGGEASTLSIWDLAAPTP-------------RIKAELTS-SAPACYALAISPDSKVCFSCCSDGNIAVWDL 170 (337)
T ss_dssp ECTTSSEEEEEESSSEEEEEECCCC---------------EEEEEEEC-SSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EcCCCCEEEEEcCCCcEEEEECCCCCc-------------ceeeeccc-CCCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 578999999999999999999854321 34556666 7889999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+... .......|...+.+++|+|+ +.++++++.|+.|++||+++++
T Consensus 171 ~~~~----------~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~~~d~~~~~ 216 (337)
T 1gxr_A 171 HNQT----------LVRQFQGHTDGASCIDISND-GTKLWTGGLDNTVRSWDLREGR 216 (337)
T ss_dssp TTTE----------EEEEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTTE
T ss_pred CCCc----------eeeeeecccCceEEEEECCC-CCEEEEEecCCcEEEEECCCCc
Confidence 8765 34444578899999999999 9999999999999999998754
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.88 E-value=8.6e-22 Score=128.48 Aligned_cols=118 Identities=15% Similarity=0.243 Sum_probs=92.3
Q ss_pred CccCCCeEE----EeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC-CCeEEEeeCCCcE
Q psy14817 1 MIQTGSRLA----TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL-TDLIATACGDDAI 75 (138)
Q Consensus 1 ~s~~~~~l~----t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~s~~~d~~i 75 (138)
|+|+|++|| +|+.|+.|+|||+........ ........+..+.+ |...|.+++|+|+ +.++++++.|++|
T Consensus 100 ~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~----~~~~~~~~~~~~~~-h~~~V~~v~~~p~~~~~las~s~Dg~v 174 (434)
T 2oit_A 100 LSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAK----QQKRPFAYHKLLKD-AGGMVIDMKWNPTVPSMVAVCLADGSI 174 (434)
T ss_dssp ECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTC----SSCCCSEEEECCCS-GGGSEEEEEECSSCTTEEEEEETTSCE
T ss_pred EcCCCCEEEEEEeccCCCceEEEEEccccccCCc----CCcceeeeeeccCC-CCCceEEEEECCCCCCEEEEEECCCeE
Confidence 689999999 899999999999864311000 00011233455666 8899999999998 6799999999999
Q ss_pred EEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
++||++... .......|...|++++|+|+ +.+|++++.|+.|++||++
T Consensus 175 ~iwD~~~~~----------~~~~~~~~~~~v~~v~wspd-g~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 175 AVLQVTETV----------KVCATLPSTVAVTSVCWSPK-GKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EEEEESSSE----------EEEEEECGGGCEEEEEECTT-SSCEEEEETTSCEEEECTT
T ss_pred EEEEcCCCc----------ceeeccCCCCceeEEEEcCC-CCEEEEEcCCCcEEEEccC
Confidence 999998653 22223367889999999999 9999999999999999987
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-21 Score=126.16 Aligned_cols=110 Identities=19% Similarity=0.265 Sum_probs=89.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|+.|++||+..... +..+.+ |...|.+++|+|++.++++++.|+.|++||+
T Consensus 147 ~~~~~~~l~s~s~d~~i~iwd~~~~~~---------------~~~~~~-h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~ 210 (420)
T 3vl1_A 147 FFPSGEALISSSQDMQLKIWSVKDGSN---------------PRTLIG-HRATVTDIAIIDRGRNVLSASLDGTIRLWEC 210 (420)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTCCC---------------CEEEEC-CSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred ECCCCCEEEEEeCCCeEEEEeCCCCcC---------------ceEEcC-CCCcEEEEEEcCCCCEEEEEcCCCcEEEeEC
Confidence 689999999999999999999865432 556677 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeec------------------------ccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHR------------------------AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~------------------------~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+.+. ...... .+...+.+++|+|+ +.++++++.|+.|++||++++
T Consensus 211 ~~~~----------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~ 279 (420)
T 3vl1_A 211 GTGT----------TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTY-GKYVIAGHVSGVITVHNVFSK 279 (420)
T ss_dssp TTTE----------EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCT-TEEEEEEETTSCEEEEETTTC
T ss_pred CCCc----------eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCC-CCEEEEEcCCCeEEEEECCCC
Confidence 8654 111111 12355666777888 999999999999999999876
Q ss_pred C
Q psy14817 137 N 137 (138)
Q Consensus 137 ~ 137 (138)
+
T Consensus 280 ~ 280 (420)
T 3vl1_A 280 E 280 (420)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.87 E-value=4e-21 Score=128.96 Aligned_cols=109 Identities=21% Similarity=0.298 Sum_probs=93.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec----------CCCeEEEee
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH----------LTDLIATAC 70 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~----------~~~~~~s~~ 70 (138)
|+|++++|++++.|+.|++|++... +++..+.+.|...|.+++|+| ++.++++++
T Consensus 496 ~s~~g~~l~~~~~dg~i~iw~~~~~---------------~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~ 560 (615)
T 1pgu_A 496 ISPSETYIAAGDVMGKILLYDLQSR---------------EVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGS 560 (615)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTT---------------EEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEE
T ss_pred ECCCCCEEEEcCCCCeEEEeeCCCC---------------cceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEc
Confidence 6899999999999999999997443 445666554788999999999 999999999
Q ss_pred CCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 71 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 71 ~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
.|+.|++|++.... .......+|...|++++|+|+ +. |++++.|+.|++|++..
T Consensus 561 ~dg~i~iw~~~~~~---------~~~~~~~~h~~~v~~l~~s~~-~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 561 LDTNIFIYSVKRPM---------KIIKALNAHKDGVNNLLWETP-ST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp TTSCEEEEESSCTT---------CCEEETTSSTTCEEEEEEEET-TE-EEEEETTSCEEEEEEC-
T ss_pred CCCcEEEEECCCCc---------eechhhhcCccceEEEEEcCC-CC-eEEecCCceEEEEeeec
Confidence 99999999998762 134445689999999999999 88 99999999999999875
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-21 Score=124.25 Aligned_cols=123 Identities=18% Similarity=0.243 Sum_probs=92.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++++.|+.|++||+..... +.+...+...|...|.+++|+|++.++++++.|+.|++||+
T Consensus 108 ~~~~~~~l~~~~~d~~i~iwd~~~~~~------------~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 175 (377)
T 3dwl_C 108 WSPNEDKFAVGSGARVISVCYFEQEND------------WWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSA 175 (377)
T ss_dssp CCTTSSCCEEEESSSCEEECCC-----------------CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEE
T ss_pred ECCCCCEEEEEecCCeEEEEEECCccc------------ceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEE
Confidence 689999999999999999999865421 11244555447889999999999999999999999999999
Q ss_pred cCCCCCC--------ceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDS--------DMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~--------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
....... ...........+ .|...|++++|+|+ +.+|++++.|+.|++||+++++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~-~~~l~~~~~d~~i~iwd~~~~~ 238 (377)
T 3dwl_C 176 YVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPS-GNALAYAGHDSSVTIAYPSAPE 238 (377)
T ss_dssp CCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTT-SSCEEEEETTTEEC-CEECSTT
T ss_pred EecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCC-CCEEEEEeCCCcEEEEECCCCC
Confidence 6432110 000111223333 78899999999999 9999999999999999998764
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-20 Score=118.57 Aligned_cols=114 Identities=19% Similarity=0.257 Sum_probs=95.0
Q ss_pred CccC-CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQT-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~-~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|+ +++|||||.|++|+|||+..... ....+...+.+ |...|.+++|+|++.++++++.|+.|++|+
T Consensus 46 ~sp~~~~~l~S~s~D~~i~vWd~~~~~~----------~~~~~~~~l~~-h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~ 114 (340)
T 4aow_A 46 TTPQFPDMILSASRDKTIIMWKLTRDET----------NYGIPQRALRG-HSHFVSDVVISSDGQFALSGSWDGTLRLWD 114 (340)
T ss_dssp ECTTCTTEEEEEETTSCEEEEEECCSSS----------CSEEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EeCCCCCEEEEEcCCCeEEEEECCCCCc----------ccceeeEEEeC-CCCCEEEEEECCCCCEEEEEcccccceEEe
Confidence 5786 68999999999999999865432 23356777888 899999999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
..... .......+...+..+.++++ +.++++++.|+.+++||++..
T Consensus 115 ~~~~~----------~~~~~~~~~~~~~~~~~~~~-~~~l~s~s~d~~~~~~d~~~~ 160 (340)
T 4aow_A 115 LTTGT----------TTRRFVGHTKDVLSVAFSSD-NRQIVSGSRDKTIKLWNTLGV 160 (340)
T ss_dssp TTTTE----------EEEEEECCSSCEEEEEECTT-SSCEEEEETTSCEEEECTTSC
T ss_pred ecccc----------eeeeecCCCCceeEEEEeec-CccceeecCCCeEEEEEeCCC
Confidence 98764 33333456678888899998 999999999999999998653
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.9e-21 Score=131.39 Aligned_cols=113 Identities=20% Similarity=0.306 Sum_probs=92.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCC--CeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT--DLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~s~~~d~~i~i~ 78 (138)
|+|++++|++|+.|++|++||...... ........+ |...|.+++|+|++ ..+++++.|++|++|
T Consensus 480 ~s~~~~~l~s~s~D~~i~iwd~~~~~~------------~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vw 546 (694)
T 3dm0_A 480 FSLDNRQIVSASRDRTIKLWNTLGECK------------YTISEGGEG-HRDWVSCVRFSPNTLQPTIVSASWDKTVKVW 546 (694)
T ss_dssp ECTTSSCEEEEETTSCEEEECTTSCEE------------EEECSSTTS-CSSCEEEEEECSCSSSCEEEEEETTSCEEEE
T ss_pred EeCCCCEEEEEeCCCEEEEEECCCCcc------------eeeccCCCC-CCCcEEEEEEeCCCCcceEEEEeCCCeEEEE
Confidence 689999999999999999999643211 011111234 78899999999987 489999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|++... ......+|...|++++|+|+ +.+|++++.|+.|++||+++++
T Consensus 547 d~~~~~----------~~~~~~~h~~~v~~v~~spd-g~~l~sg~~Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 547 NLSNCK----------LRSTLAGHTGYVSTVAVSPD-GSLCASGGKDGVVLLWDLAEGK 594 (694)
T ss_dssp ETTTCC----------EEEEECCCSSCEEEEEECTT-SSEEEEEETTSBCEEEETTTTE
T ss_pred ECCCCc----------EEEEEcCCCCCEEEEEEeCC-CCEEEEEeCCCeEEEEECCCCc
Confidence 998765 44455689999999999999 9999999999999999998764
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.87 E-value=7e-21 Score=131.54 Aligned_cols=109 Identities=22% Similarity=0.254 Sum_probs=96.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++||+++.||.|++||+... +.+..+.. |...|.+++|+|++.++++++.|+.|++|++
T Consensus 21 ~sp~~~~la~~~~~g~v~iwd~~~~---------------~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 84 (814)
T 3mkq_A 21 FHPTEPWVLTTLYSGRVEIWNYETQ---------------VEVRSIQV-TETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (814)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTT---------------EEEEEEEC-CSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred ECCCCCEEEEEeCCCEEEEEECCCC---------------ceEEEEec-CCCcEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 6899999999999999999997442 45677777 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
..+. .......|...|++++|+|+ +.+|++++.|+.|++||++++
T Consensus 85 ~~~~----------~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~vw~~~~~ 129 (814)
T 3mkq_A 85 NTGE----------KVVDFEAHPDYIRSIAVHPT-KPYVLSGSDDLTVKLWNWENN 129 (814)
T ss_dssp TTCC----------EEEEEECCSSCEEEEEECSS-SSEEEEEETTSEEEEEEGGGT
T ss_pred CCCc----------EEEEEecCCCCEEEEEEeCC-CCEEEEEcCCCEEEEEECCCC
Confidence 8776 44444579999999999999 999999999999999998765
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.87 E-value=6.5e-21 Score=126.47 Aligned_cols=116 Identities=15% Similarity=0.229 Sum_probs=87.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCc----cCeEEEEEecCCCeEEEeeCCCcEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG----RTIYDISWCHLTDLIATACGDDAIR 76 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~~v~~~~~~~~~~s~~~d~~i~ 76 (138)
|||+|++||+++.||.|++|+.. .++..+. ++. ..+.+++|+|+|+++++|+.||+|+
T Consensus 93 wSPdG~~LAs~s~dg~V~iwd~~-----------------~~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVk 154 (588)
T 2j04_A 93 PSPIDDWMAVLSNNGNVSVFKDN-----------------KMLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQ 154 (588)
T ss_dssp ECSSSSCEEEEETTSCEEEEETT-----------------EEEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEE
T ss_pred ECCCCCEEEEEeCCCcEEEEeCC-----------------ceeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEE
Confidence 79999999999999999999942 1344444 232 2699999999999999999999999
Q ss_pred EEeccCCCCCCce-eeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 77 IFKENPEAGDSDM-VSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 77 i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+|++..+...... ...........+|...|.+++|+|+ + +++++.|+.+++||+..+.
T Consensus 155 IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPd-g--Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 155 FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYED-V--LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETT-E--EEEEETTCCEEEECCCSSS
T ss_pred EEECCCCccccccceeeeeeecccccccccEEEEEEcCC-c--EEEEeCCCeEEEEECCCCc
Confidence 9999865300000 0011111112467889999999998 7 8889999999999997654
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.6e-21 Score=128.74 Aligned_cols=117 Identities=13% Similarity=0.089 Sum_probs=87.7
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
++.+||+++.|++|++||+........... ...++...+.+ |...|.+++|+++ ..|++|+.||+|++||++.+
T Consensus 224 ~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~----~~~~p~~~l~~-h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~ 297 (524)
T 2j04_B 224 LVGCLSFVSQEGTINFLEIIDNATDVHVFK----MCEKPSLTLSL-ADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDP 297 (524)
T ss_dssp SSCEEEEEETTSCEEEEECCCCSSSSSEEE----CCCSCSEEECC-TTTCEEEEEESSS-SEEEEEETTSEEEEEETTBC
T ss_pred CCceEEEEecCCeEEEEEcCCCccccccce----eecCceEEEEc-CCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCC
Confidence 368999999999999999865432100000 00012346677 8899999999985 48999999999999999865
Q ss_pred CCCCceeeeeeeeeeecccccceeEE--EEccCCC-CEEEEEeCCCcEEEEEcCCC
Q psy14817 84 AGDSDMVSFDLVHTEHRAHNQDVNCV--AWNPVVP-GMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~-~~l~~~~~d~~v~~wd~~~~ 136 (138)
. ........|...|+++ .|+|+ + .+|++++.|++|++||++++
T Consensus 298 ~---------~~~~~~~~H~~~V~sv~~~~s~~-g~~~laS~S~D~tvklWD~~~~ 343 (524)
T 2j04_B 298 E---------VPSFYDQVHDSYILSVSTAYSDF-EDTVVSTVAVDGYFYIFNPKDI 343 (524)
T ss_dssp S---------SCSEEEECSSSCEEEEEEECCTT-SCCEEEEEETTSEEEEECGGGH
T ss_pred C---------CceEEeecccccEEEEEEEcCCC-CCeEEEEeccCCeEEEEECCCC
Confidence 3 1223345799999999 56776 6 89999999999999999764
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-20 Score=120.20 Aligned_cols=114 Identities=18% Similarity=0.310 Sum_probs=95.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++++.|+.|++|++... .++.+..+.+ |...|.+++|+|++.++++++.|+.|++|++
T Consensus 16 ~s~~~~~l~~~~~d~~v~i~~~~~~-------------~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 81 (372)
T 1k8k_C 16 WNKDRTQIAICPNNHEVHIYEKSGN-------------KWVQVHELKE-HNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL 81 (372)
T ss_dssp ECTTSSEEEEECSSSEEEEEEEETT-------------EEEEEEEEEC-CSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred ECCCCCEEEEEeCCCEEEEEeCCCC-------------cEEeeeeecC-CCCcccEEEEeCCCCEEEEEcCCCeEEEEEC
Confidence 6899999999999999999997543 1236777887 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.... . ........|...|.+++|+|+ +.+|++++.|+.|++||++.+.
T Consensus 82 ~~~~-----~---~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 82 KGRT-----W---KPTLVILRINRAARCVRWAPN-EKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp ETTE-----E---EEEEECCCCSSCEEEEEECTT-SSEEEEEETTSSEEEEEEETTT
T ss_pred CCCe-----e---eeeEEeecCCCceeEEEECCC-CCEEEEEeCCCEEEEEEecCCC
Confidence 7653 0 011122468889999999999 9999999999999999987653
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.87 E-value=6.5e-21 Score=122.29 Aligned_cols=111 Identities=15% Similarity=0.158 Sum_probs=90.9
Q ss_pred CccCCCeEEEeeCC---CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC------------CccCeEEEEEecCCCe
Q psy14817 1 MIQTGSRLATCSDD---ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH------------HGRTIYDISWCHLTDL 65 (138)
Q Consensus 1 ~s~~~~~l~t~s~d---~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~v~~v~~~~~~~~ 65 (138)
|+|++++|++++.| +.|++||++.. +++..+... |...|.+++|+|++.+
T Consensus 241 ~~~~~~~l~~~~~d~~~g~i~i~d~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 305 (397)
T 1sq9_A 241 FSPQGSLLAIAHDSNSFGCITLYETEFG---------------ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGET 305 (397)
T ss_dssp ECSSTTEEEEEEEETTEEEEEEEETTTC---------------CEEEEECBC--------CCBSBSSCEEEEEECSSSSE
T ss_pred ECCCCCEEEEEecCCCCceEEEEECCCC---------------cccceeccCcccccccccccccCCcEEEEEECCCCCE
Confidence 57899999999999 99999997643 234444431 6789999999999999
Q ss_pred EEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeec------cc---------------ccceeEEEEccCCC--------
Q psy14817 66 IATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR------AH---------------NQDVNCVAWNPVVP-------- 116 (138)
Q Consensus 66 ~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~------~~---------------~~~v~~~~~~~~~~-------- 116 (138)
+++++.|+.|++||+.... ...... .| ...|++++|+|+ +
T Consensus 306 l~~~~~dg~i~iwd~~~~~----------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~-g~~~~~~~~ 374 (397)
T 1sq9_A 306 LCSAGWDGKLRFWDVKTKE----------RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKK-GWRSGMGAD 374 (397)
T ss_dssp EEEEETTSEEEEEETTTTE----------EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECT-TTSBSTTCT
T ss_pred EEEEeCCCeEEEEEcCCCc----------eeEEEecccCcccchhhhhccccccccccCCceeEEEeccc-ccccccccc
Confidence 9999999999999998764 222223 45 889999999998 6
Q ss_pred --CEEEEEeCCCcEEEEEcCCCC
Q psy14817 117 --GMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 117 --~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.+|++++.|+.|++|++++++
T Consensus 375 ~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 375 LNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp TSCEEEEEETTTEEEEEEEEC--
T ss_pred ccceEEEecCCCcEEEEEcCCCC
Confidence 799999999999999998764
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.5e-20 Score=118.19 Aligned_cols=108 Identities=21% Similarity=0.402 Sum_probs=93.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|+.|++||+... +.+..+.. |...|.+++|+|++.++++++.|+.|++||+
T Consensus 40 ~s~~~~~l~~~~~dg~i~vwd~~~~---------------~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 40 YNKEGDLLFSCSKDSSASVWYSLNG---------------ERLGTLDG-HTGTIWSIDVDCFTKYCVTGSADYSIKLWDV 103 (369)
T ss_dssp ECTTSCEEEEEESSSCEEEEETTTC---------------CEEEEECC-CSSCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred EcCCCCEEEEEeCCCEEEEEeCCCc---------------hhhhhhhh-cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 6899999999999999999997443 44677777 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC-----CcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD-----GDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----~~v~~wd~~~~ 136 (138)
..+. ..... .+...+.+++|+|+ +.++++++.+ +.|++||++.+
T Consensus 104 ~~~~----------~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 104 SNGQ----------CVATW-KSPVPVKRVEFSPC-GNYFLAILDNVMKNPGSINIYEIERD 152 (369)
T ss_dssp TTCC----------EEEEE-ECSSCEEEEEECTT-SSEEEEEECCBTTBCCEEEEEEEEEC
T ss_pred CCCc----------EEEEe-ecCCCeEEEEEccC-CCEEEEecCCccCCCCEEEEEEecCC
Confidence 8766 33333 37789999999999 9999999998 99999998765
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.86 E-value=6e-21 Score=133.72 Aligned_cols=126 Identities=12% Similarity=0.136 Sum_probs=94.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCC--------C---------c-------------cCCCCCCceEEeEEecCCC
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSA--------G---------I-------------PTPDNDSVWKCVCTLSGHH 50 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~--------~---------~-------------~~~~~~~~~~~~~~~~~~~ 50 (138)
|+|+|++||+|+.|++|+||++....... . . .........+++..+.+ |
T Consensus 496 fspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~-h 574 (902)
T 2oaj_A 496 FAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHA-N 574 (902)
T ss_dssp EETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECC-C
T ss_pred ecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEc-C
Confidence 68999999999999999999987542100 0 0 00000112467788888 8
Q ss_pred ccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeec-ccccceeEEEEc-----cCC--CCEEEEE
Q psy14817 51 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR-AHNQDVNCVAWN-----PVV--PGMLASC 122 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~-----~~~--~~~l~~~ 122 (138)
.+.|++++|+|+| ++++|+.|++|++||++... .........+. +|...|++++|+ |+. +.+|+++
T Consensus 575 ~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~-----~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sg 648 (902)
T 2oaj_A 575 KGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPA-----IIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCG 648 (902)
T ss_dssp SCSEEEEEECBTS-EEEEEETTSEEEEEETTTTE-----EEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEE
T ss_pred CCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCe-----EEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEE
Confidence 9999999999999 99999999999999986543 11100112232 788999999999 872 3799999
Q ss_pred eCCCcEEEEEc
Q psy14817 123 SDDGDVKLWQI 133 (138)
Q Consensus 123 ~~d~~v~~wd~ 133 (138)
+.|++|++||+
T Consensus 649 s~D~tv~~wd~ 659 (902)
T 2oaj_A 649 TDMGEVITYKI 659 (902)
T ss_dssp ETTSEEEEEEE
T ss_pred ecCCcEEEEEE
Confidence 99999999998
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.1e-20 Score=134.08 Aligned_cols=111 Identities=23% Similarity=0.412 Sum_probs=97.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|+|+++|+|+.|+.|++||.... +++..+.+ |...|.+++|+|++.++++++.|+.|++||+
T Consensus 623 ~s~~~~~l~s~~~d~~i~vw~~~~~---------------~~~~~~~~-h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~ 686 (1249)
T 3sfz_A 623 FSQDGQRIASCGADKTLQVFKAETG---------------EKLLDIKA-HEDEVLCCAFSSDDSYIATCSADKKVKIWDS 686 (1249)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTC---------------CEEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ECCCCCEEEEEeCCCeEEEEECCCC---------------CEEEEecc-CCCCEEEEEEecCCCEEEEEeCCCeEEEEEC
Confidence 6899999999999999999997543 44777887 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccC-CCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV-VPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..+. .......|...|.+++|+|+ +..++++++.|+.|++||+++++
T Consensus 687 ~~~~----------~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~ 734 (1249)
T 3sfz_A 687 ATGK----------LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE 734 (1249)
T ss_dssp TTCC----------EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS
T ss_pred CCCc----------eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc
Confidence 9876 44455689999999999995 25689999999999999998764
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-20 Score=116.83 Aligned_cols=107 Identities=17% Similarity=0.242 Sum_probs=90.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++. +++++.|+.|++||++.. +++..+.. |...|.+++|+|++ .+++++.|+.|++||+
T Consensus 192 ~~~~~~-~~~~~~dg~i~i~d~~~~---------------~~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~ 253 (313)
T 3odt_A 192 VVDDGH-FISCSNDGLIKLVDMHTG---------------DVLRTYEG-HESFVYCIKLLPNG-DIVSCGEDRTVRIWSK 253 (313)
T ss_dssp EEETTE-EEEEETTSEEEEEETTTC---------------CEEEEEEC-CSSCEEEEEECTTS-CEEEEETTSEEEEECT
T ss_pred EcCCCe-EEEccCCCeEEEEECCch---------------hhhhhhhc-CCceEEEEEEecCC-CEEEEecCCEEEEEEC
Confidence 467777 999999999999997543 44677777 88999999999999 6889999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..+. .......|...|.+++|+|+ +. +++++.|+.|++||+++++
T Consensus 254 ~~~~----------~~~~~~~~~~~i~~~~~~~~-~~-~~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 254 ENGS----------LKQVITLPAISIWSVDCMSN-GD-IIVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp TTCC----------EEEEEECSSSCEEEEEECTT-SC-EEEEETTSCEEEEESCGGG
T ss_pred CCCc----------eeEEEeccCceEEEEEEccC-CC-EEEEeCCCcEEEEeCCCCc
Confidence 8776 44444578889999999998 76 6679999999999998765
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.86 E-value=8.6e-20 Score=116.06 Aligned_cols=124 Identities=17% Similarity=0.160 Sum_probs=93.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++++.|+.|++||+..... +.....+...|...|.+++|+|++.++++++.|+.|++||+
T Consensus 104 ~~~~~~~l~~~~~d~~v~i~d~~~~~~------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~ 171 (372)
T 1k8k_C 104 WAPNEKKFAVGSGSRVISICYFEQEND------------WWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSA 171 (372)
T ss_dssp ECTTSSEEEEEETTSSEEEEEEETTTT------------EEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred ECCCCCEEEEEeCCCEEEEEEecCCCc------------ceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEc
Confidence 578999999999999999999865421 22333443337899999999999999999999999999997
Q ss_pred cCCCCCCce--------eeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDM--------VSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~--------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
......... ............|...|.+++|+|+ +.+|++++.|+.|++||+++++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~ 235 (372)
T 1k8k_C 172 YIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSAN-GSRVAWVSHDSTVCLADADKKM 235 (372)
T ss_dssp CCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSS-SSEEEEEETTTEEEEEEGGGTT
T ss_pred ccccccccccccccccccchhhheEecCCCCCeEEEEEECCC-CCEEEEEeCCCEEEEEECCCCc
Confidence 532100000 0000123334478889999999999 9999999999999999998764
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.2e-20 Score=118.11 Aligned_cols=114 Identities=23% Similarity=0.391 Sum_probs=92.6
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC---CCeEEEeeCCCcEEEEec
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL---TDLIATACGDDAIRIFKE 80 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~---~~~~~s~~~d~~i~i~~~ 80 (138)
++++|++++.|+.|++||++... ..+.+...+.+ |...|.+++|+|+ +.++++++.|+.|++||+
T Consensus 171 ~~~~l~~~~~dg~i~i~d~~~~~-----------~~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~ 238 (379)
T 3jrp_A 171 ESRKFVTGGADNLVKIWKYNSDA-----------QTYVLESTLEG-HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 238 (379)
T ss_dssp TTCEEEEEETTSCEEEEEEETTT-----------TEEEEEEEECC-CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEEecCCC-----------cceeeEEEEec-ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeC
Confidence 79999999999999999986542 23455677777 8999999999999 789999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
...... .. ........|...|++++|+|+ +.+|++++.|+.|++|+++.
T Consensus 239 ~~~~~~---~~--~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 239 DNEQGP---WK--KTLLKEEKFPDVLWRASWSLS-GNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp SSTTSC---CE--EEESSSSCCSSCEEEEEECSS-SCCEEEEESSSSEEEEEEEE
T ss_pred CCCCcc---ce--eeeeccccCCCcEEEEEEcCC-CCEEEEecCCCcEEEEeCCC
Confidence 875411 01 111122347889999999999 99999999999999999873
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.9e-20 Score=118.50 Aligned_cols=109 Identities=20% Similarity=0.283 Sum_probs=92.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.||.|++||+... +.+..+.+ |...|.++.| ++..+++++.|+.|++||+
T Consensus 142 ~s~~~~~l~~~~~dg~i~iwd~~~~---------------~~~~~~~~-~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~ 203 (401)
T 4aez_A 142 WSHDGSFLSVGLGNGLVDIYDVESQ---------------TKLRTMAG-HQARVGCLSW--NRHVLSSGSRSGAIHHHDV 203 (401)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTC---------------CEEEEECC-CSSCEEEEEE--ETTEEEEEETTSEEEEEET
T ss_pred ECCCCCEEEEECCCCeEEEEECcCC---------------eEEEEecC-CCCceEEEEE--CCCEEEEEcCCCCEEEEec
Confidence 6899999999999999999997543 34677777 8999999999 4679999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+... ........|...|.+++|+|+ +.+|++++.|+.|++||+++++
T Consensus 204 ~~~~---------~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~v~iwd~~~~~ 250 (401)
T 4aez_A 204 RIAN---------HQIGTLQGHSSEVCGLAWRSD-GLQLASGGNDNVVQIWDARSSI 250 (401)
T ss_dssp TSSS---------CEEEEEECCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTCSS
T ss_pred ccCc---------ceeeEEcCCCCCeeEEEEcCC-CCEEEEEeCCCeEEEccCCCCC
Confidence 8433 133444578999999999998 9999999999999999998754
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=7.5e-20 Score=114.14 Aligned_cols=124 Identities=18% Similarity=0.265 Sum_probs=89.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCcc-----------------CC--------C-CCC--------ceEEeEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIP-----------------TP--------D-NDS--------VWKCVCTL 46 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~-----------------~~--------~-~~~--------~~~~~~~~ 46 (138)
+++++++|++++.|+.|++||++......... .. + ... .......
T Consensus 158 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~- 236 (318)
T 4ggc_A 158 WAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA- 236 (318)
T ss_dssp ECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEE-
T ss_pred EcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccc-
Confidence 46789999999999999999986543221100 00 0 000 0001111
Q ss_pred cCCCccCeEEEEEecCCCeEEEe--eCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC
Q psy14817 47 SGHHGRTIYDISWCHLTDLIATA--CGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124 (138)
Q Consensus 47 ~~~~~~~v~~v~~~~~~~~~~s~--~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 124 (138)
.. +...+..+.|++.+..++++ +.|+.|++||++.+. ....+.+|...|++++|+|+ +.+|++++.
T Consensus 237 ~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~----------~~~~l~gH~~~V~~l~~spd-g~~l~S~s~ 304 (318)
T 4ggc_A 237 VD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA----------KVAELKGHTSRVLSLTMSPD-GATVASAAA 304 (318)
T ss_dssp EE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC----------EEEEECCCSSCEEEEEECTT-SSCEEEEET
T ss_pred cc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc----------EEEEEcCCCCCEEEEEEcCC-CCEEEEEec
Confidence 11 45678899999999866654 478999999998876 45556689999999999999 999999999
Q ss_pred CCcEEEEEcCCCC
Q psy14817 125 DGDVKLWQIKLEN 137 (138)
Q Consensus 125 d~~v~~wd~~~~~ 137 (138)
|++|++||+....
T Consensus 305 D~~v~iWd~~~~d 317 (318)
T 4ggc_A 305 DETLRLWRCFELD 317 (318)
T ss_dssp TTEEEEECCSCCC
T ss_pred CCeEEEEECCCCC
Confidence 9999999997654
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.4e-20 Score=121.89 Aligned_cols=114 Identities=15% Similarity=0.117 Sum_probs=94.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC---CCeEEEeeCCCcEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL---TDLIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~---~~~~~s~~~d~~i~i 77 (138)
|+|++++|++|+.|+.|++|++....... .+...+.+ |...|.+++|+|+ +.++++++.|+.|++
T Consensus 157 ~sp~~~~l~~~~~~g~v~~~~~~~~~~~~-----------~~~~~~~~-h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~v 224 (450)
T 2vdu_B 157 IAEDDTTVIIADKFGDVYSIDINSIPEEK-----------FTQEPILG-HVSMLTDVHLIKDSDGHQFIITSDRDEHIKI 224 (450)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTSCCCSS-----------CCCCCSEE-CSSCEEEEEEEECTTSCEEEEEEETTSCEEE
T ss_pred EcCCCCEEEEEeCCCcEEEEecCCccccc-----------ccceeeec-ccCceEEEEEcCCCCCCcEEEEEcCCCcEEE
Confidence 68999999999999999999986543311 01234555 7889999999999 889999999999999
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
||+..+. .......+|...|++++|+ + +.+|++++.|+.|++||+++++
T Consensus 225 wd~~~~~---------~~~~~~~~h~~~v~~~~~s-d-~~~l~s~~~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 225 SHYPQCF---------IVDKWLFGHKHFVSSICCG-K-DYLLLSAGGDDKIFAWDWKTGK 273 (450)
T ss_dssp EEESCTT---------CEEEECCCCSSCEEEEEEC-S-TTEEEEEESSSEEEEEETTTCC
T ss_pred EECCCCc---------eeeeeecCCCCceEEEEEC-C-CCEEEEEeCCCeEEEEECCCCc
Confidence 9998765 2223345789999999999 7 9999999999999999998765
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.86 E-value=3.2e-20 Score=119.69 Aligned_cols=110 Identities=25% Similarity=0.400 Sum_probs=92.0
Q ss_pred CccCC-CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEe--cCCCccCeEEEEEecCCCeEEEeeCCCcEEE
Q psy14817 1 MIQTG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL--SGHHGRTIYDISWCHLTDLIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~~-~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i 77 (138)
|+|++ ++|++++.|+.|++||+... +++..+ .. |...|.+++|+|++.++++++.|+.|++
T Consensus 139 ~~p~~~~~l~s~~~dg~i~iwd~~~~---------------~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~i 202 (402)
T 2aq5_A 139 WHPTAQNVLLSAGCDNVILVWDVGTG---------------AAVLTLGPDV-HPDTIYSVDWSRDGALICTSCRDKRVRV 202 (402)
T ss_dssp ECSSBTTEEEEEETTSCEEEEETTTT---------------EEEEEECTTT-CCSCEEEEEECTTSSCEEEEETTSEEEE
T ss_pred ECcCCCCEEEEEcCCCEEEEEECCCC---------------CccEEEecCC-CCCceEEEEECCCCCEEEEEecCCcEEE
Confidence 57887 69999999999999997543 456677 56 8899999999999999999999999999
Q ss_pred EeccCCCCCCceeeeeeeeeee-cccccc-eeEEEEccCCCCEEEEE---eCCCcEEEEEcCCCC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEH-RAHNQD-VNCVAWNPVVPGMLASC---SDDGDVKLWQIKLEN 137 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~l~~~---~~d~~v~~wd~~~~~ 137 (138)
||++.+. ..... ..|... +..+.|+|+ +.+++++ +.|+.|++||+++.+
T Consensus 203 wd~~~~~----------~~~~~~~~~~~~~~~~~~~~~~-~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 203 IEPRKGT----------VVAEKDRPHEGTRPVHAVFVSE-GKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp EETTTTE----------EEEEEECSSCSSSCCEEEECST-TEEEEEEECTTCCEEEEEEETTBCS
T ss_pred EeCCCCc----------eeeeeccCCCCCcceEEEEcCC-CcEEEEeccCCCCceEEEEcCcccc
Confidence 9998765 22222 456654 899999999 9999998 789999999998753
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.4e-20 Score=127.33 Aligned_cols=114 Identities=32% Similarity=0.497 Sum_probs=96.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC--CCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL--TDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~s~~~d~~i~i~ 78 (138)
|+|++++|++|+.||.|++|++.. ...+.+..+.+ |...|.+++|+++ +.++++++.||.|++|
T Consensus 17 ~s~dg~~latg~~dg~I~vwd~~~-------------~~~~~~~~l~~-h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 17 LDYYGKRLATCSSDKTIKIFEVEG-------------ETHKLIDTLTG-HEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp CCSSSCCEEEEETTTEEEEEEEET-------------TEEEEEEEECC-CSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred ECCCCCeEEEEECCCcEEEEecCC-------------CCCccceeccC-CcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 789999999999999999999752 23466778888 8999999999988 8899999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCC-CCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV-PGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|+..+. .........|...|++++|+|+. +..+++++.|+.|++||++.+
T Consensus 83 d~~~~~--------~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 83 KEENGR--------WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp EEETTE--------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred ECCCCc--------ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 998653 01223345788999999999974 689999999999999999876
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.85 E-value=3e-20 Score=118.97 Aligned_cols=109 Identities=16% Similarity=0.180 Sum_probs=87.9
Q ss_pred Ccc-CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQ-TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~-~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+| ++++|++++.|+.|++||+... ....+..... |...|.+++|+|++.++++++.|+.|++||
T Consensus 126 ~~~~~~~~l~s~~~d~~i~iwd~~~~-------------~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 191 (383)
T 3ei3_B 126 FNQFNTNQLFVSSIRGATTLRDFSGS-------------VIQVFAKTDS-WDYWYCCVDVSVSRQMLATGDSTGRLLLLG 191 (383)
T ss_dssp EETTEEEEEEEEETTTEEEEEETTSC-------------EEEEEECCCC-SSCCEEEEEEETTTTEEEEEETTSEEEEEE
T ss_pred eCCCCCCEEEEEeCCCEEEEEECCCC-------------ceEEEeccCC-CCCCeEEEEECCCCCEEEEECCCCCEEEEE
Confidence 567 6799999999999999998531 1122222222 457899999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCC-EEEEEeCCCcEEEEEcCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~d~~v~~wd~~~ 135 (138)
+.. . .......|...|.+++|+|+ +. ++++++.|+.|++||+++
T Consensus 192 ~~~-~----------~~~~~~~h~~~v~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 192 LDG-H----------EIFKEKLHKAKVTHAEFNPR-CDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp TTS-C----------EEEEEECSSSCEEEEEECSS-CTTEEEEEETTSEEEEEEGGG
T ss_pred CCC-C----------EEEEeccCCCcEEEEEECCC-CCCEEEEEeCCCEEEEEeCCC
Confidence 952 2 23334578999999999999 76 999999999999999987
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.5e-20 Score=121.18 Aligned_cols=127 Identities=18% Similarity=0.278 Sum_probs=93.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCc------------cCeEEEEEecCC--CeE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG------------RTIYDISWCHLT--DLI 66 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~v~~v~~~~~~--~~~ 66 (138)
|+|+|++||+|+.||.|+||++........ .....+++...+.+ |. ..|.+++|+|++ ..+
T Consensus 36 ~s~~g~~la~g~~dg~v~iw~~~~~~~~~~----~~~~~~~~~~~~~~-h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l 110 (447)
T 3dw8_B 36 FNHSGELLATGDKGGRVVIFQQEQENKIQS----HSRGEYNVYSTFQS-HEPEFDYLKSLEIEEKINKIRWLPQKNAAQF 110 (447)
T ss_dssp ECSSSSEEEEEETTSEEEEEEECC-----C----CCCCCEEEEEEEEC-CCCEEEGGGTEEECCCCCEEEECCCCSSSEE
T ss_pred ECCCCCEEEEEcCCCeEEEEEecCCCCCCc----ccccceeEeccccc-ccccccccccccccCceEEEEEcCCCCcceE
Confidence 689999999999999999999865432110 11234556777887 77 889999999998 789
Q ss_pred EEeeCCCcEEEEeccCCCCC---------------------Cceee---------eeeeeeeecccccceeEEEEccCCC
Q psy14817 67 ATACGDDAIRIFKENPEAGD---------------------SDMVS---------FDLVHTEHRAHNQDVNCVAWNPVVP 116 (138)
Q Consensus 67 ~s~~~d~~i~i~~~~~~~~~---------------------~~~~~---------~~~~~~~~~~~~~~v~~~~~~~~~~ 116 (138)
++++.|+.|++|++...... ...+. .........+|...|++++|+|+ +
T Consensus 111 ~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~ 189 (447)
T 3dw8_B 111 LLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSD-Y 189 (447)
T ss_dssp EEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTT-S
T ss_pred EEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCC-C
Confidence 99999999999998753200 00000 00011223578999999999999 9
Q ss_pred CEEEEEeCCCcEEEEEcC
Q psy14817 117 GMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 117 ~~l~~~~~d~~v~~wd~~ 134 (138)
.+|+++ .|+.|++||++
T Consensus 190 ~~l~s~-~d~~i~iwd~~ 206 (447)
T 3dw8_B 190 ETYLSA-DDLRINLWHLE 206 (447)
T ss_dssp SEEEEE-CSSEEEEEETT
T ss_pred CEEEEe-CCCeEEEEECC
Confidence 999998 79999999998
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.85 E-value=5.1e-20 Score=120.47 Aligned_cols=108 Identities=18% Similarity=0.388 Sum_probs=92.7
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
++++++|++|+.||.|++||+... +++..+.+ |...|.+++|++++ .+++++.|++|++||+.
T Consensus 129 ~~~~~~l~sgs~dg~i~vwd~~~~---------------~~~~~~~~-h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~ 191 (464)
T 3v7d_B 129 QFEDNYVITGADDKMIRVYDSINK---------------KFLLQLSG-HDGGVWALKYAHGG-ILVSGSTDRTVRVWDIK 191 (464)
T ss_dssp EEETTEEEEEETTSCEEEEETTTT---------------EEEEEECC-CSSCEEEEEECSTT-EEEEEETTSCEEEEETT
T ss_pred EECCCEEEEEcCCCcEEEEECCCC---------------cEEEEEeC-CCcCEEEEEEcCCC-EEEEEeCCCCEEEEECC
Confidence 356889999999999999996433 56788888 89999999999887 99999999999999998
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEcc--CCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP--VVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.+. .......|...|.+++|++ + +.++++++.|+.|++||++++.
T Consensus 192 ~~~----------~~~~~~~h~~~v~~l~~~~~~~-~~~l~s~s~d~~i~vwd~~~~~ 238 (464)
T 3v7d_B 192 KGC----------CTHVFEGHNSTVRCLDIVEYKN-IKYIVTGSRDNTLHVWKLPKES 238 (464)
T ss_dssp TTE----------EEEEECCCSSCEEEEEEEESSS-CEEEEEEETTSCEEEEECCCCC
T ss_pred CCc----------EEEEECCCCCccEEEEEecCCC-CCEEEEEcCCCcEEEeeCCCCc
Confidence 765 4445567999999999985 4 7899999999999999998754
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.85 E-value=8.2e-21 Score=123.41 Aligned_cols=111 Identities=9% Similarity=0.051 Sum_probs=90.1
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC-CccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
++++++|++|+.|+.|++||++.. +++..+... |...|.+++|+|++.++++++.|+.|++||+
T Consensus 179 ~~~~~~l~~~~~d~~i~iwd~~~~---------------~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 243 (437)
T 3gre_A 179 NEEKSLLVALTNLSRVIIFDIRTL---------------ERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDI 243 (437)
T ss_dssp CSSCEEEEEEETTSEEEEEETTTC---------------CEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEET
T ss_pred cCCCCEEEEEeCCCeEEEEeCCCC---------------eeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEc
Confidence 467999999999999999997553 345666553 6789999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeee-cccccceeEEEEccC---CCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEH-RAHNQDVNCVAWNPV---VPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~---~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.+. ..... ..|...|.+++|+|. ++.+|++++.|+.|++||+++++
T Consensus 244 ~~~~----------~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 244 RFNV----------LIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp TTTE----------EEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTE
T ss_pred CCcc----------EEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCc
Confidence 8754 22222 267779999976652 26799999999999999998654
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.1e-19 Score=112.74 Aligned_cols=109 Identities=14% Similarity=0.232 Sum_probs=93.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++++.|+.|++||++.. +.+..+.. |...+.+++|+|++.++++++.|+.|++||+
T Consensus 149 ~~~~~~~l~~~~~dg~v~~~d~~~~---------------~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~ 212 (337)
T 1gxr_A 149 ISPDSKVCFSCCSDGNIAVWDLHNQ---------------TLVRQFQG-HTDGASCIDISNDGTKLWTGGLDNTVRSWDL 212 (337)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTT---------------EEEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ECCCCCEEEEEeCCCcEEEEeCCCC---------------ceeeeeec-ccCceEEEEECCCCCEEEEEecCCcEEEEEC
Confidence 5789999999999999999997543 45677777 8899999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+... ..... .+...+.+++|+|+ +.++++++.|+.|++||++.++
T Consensus 213 ~~~~----------~~~~~-~~~~~v~~~~~s~~-~~~l~~~~~~~~i~~~~~~~~~ 257 (337)
T 1gxr_A 213 REGR----------QLQQH-DFTSQIFSLGYCPT-GEWLAVGMESSNVEVLHVNKPD 257 (337)
T ss_dssp TTTE----------EEEEE-ECSSCEEEEEECTT-SSEEEEEETTSCEEEEETTSSC
T ss_pred CCCc----------eEeee-cCCCceEEEEECCC-CCEEEEEcCCCcEEEEECCCCC
Confidence 8764 22222 46778999999999 9999999999999999998754
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.85 E-value=7.5e-20 Score=117.36 Aligned_cols=110 Identities=18% Similarity=0.286 Sum_probs=91.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC--C---ccCeEEEEEecCCCeEEEeeCC---
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH--H---GRTIYDISWCHLTDLIATACGD--- 72 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~v~~v~~~~~~~~~~s~~~d--- 72 (138)
|+|++ +|++++.|+.|++||++.. +++..+... | ...|.+++|+|++.++++++.|
T Consensus 194 ~~~~~-~l~~~~~dg~i~i~d~~~~---------------~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~ 257 (397)
T 1sq9_A 194 ISERG-LIATGFNNGTVQISELSTL---------------RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSF 257 (397)
T ss_dssp ECTTS-EEEEECTTSEEEEEETTTT---------------EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTE
T ss_pred ECCCc-eEEEEeCCCcEEEEECCCC---------------ceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCC
Confidence 57889 9999999999999997542 334444431 5 7899999999999999999999
Q ss_pred CcEEEEeccCCCCCCceeeeeeeeeeecc-------------cccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 73 DAIRIFKENPEAGDSDMVSFDLVHTEHRA-------------HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 73 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.|++||+.... ....... |...|.+++|+|+ +.+|++++.|+.|++||+++++
T Consensus 258 g~i~i~d~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~ 324 (397)
T 1sq9_A 258 GCITLYETEFGE----------RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDS-GETLCSAGWDGKLRFWDVKTKE 324 (397)
T ss_dssp EEEEEEETTTCC----------EEEEECBC--------CCBSBSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTTE
T ss_pred ceEEEEECCCCc----------ccceeccCcccccccccccccCCcEEEEEECCC-CCEEEEEeCCCeEEEEEcCCCc
Confidence 999999998765 3333334 8899999999999 9999999999999999998754
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.85 E-value=8.4e-20 Score=118.84 Aligned_cols=113 Identities=20% Similarity=0.383 Sum_probs=91.6
Q ss_pred Ccc-CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEE
Q psy14817 1 MIQ-TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~-~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~ 78 (138)
|+| ++.+|++++.|+.|++||++..... +++..+.. |...|.+++|+|++. ++++++.|+.|++|
T Consensus 239 ~~p~~~~~l~s~~~dg~i~i~d~~~~~~~------------~~~~~~~~-~~~~v~~i~~~p~~~~~l~tg~~dg~v~vw 305 (430)
T 2xyi_A 239 WHLLHESLFGSVADDQKLMIWDTRNNNTS------------KPSHTVDA-HTAEVNCLSFNPYSEFILATGSADKTVALW 305 (430)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCSCSS------------SCSEEEEC-CSSCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred EeCCCCCEEEEEeCCCeEEEEECCCCCCC------------cceeEeec-CCCCeEEEEeCCCCCCEEEEEeCCCeEEEE
Confidence 467 6789999999999999998764311 22445556 889999999999997 78999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
|++... .....+..|...|++++|+|+...+|++++.|+.|++||++.
T Consensus 306 d~~~~~---------~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 306 DLRNLK---------LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp ETTCTT---------SCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred eCCCCC---------CCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 998643 133344578899999999999346799999999999999976
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.3e-20 Score=117.33 Aligned_cols=124 Identities=15% Similarity=0.189 Sum_probs=92.1
Q ss_pred Ccc---CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEE
Q psy14817 1 MIQ---TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIR 76 (138)
Q Consensus 1 ~s~---~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~ 76 (138)
|+| ++++|++++.|+.|++||++..... .. .....+.. |...|.+++|+|++. ++++++.|+.|+
T Consensus 217 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---------~~-~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 285 (357)
T 3i2n_A 217 FDRKDISMNKLVATSLEGKFHVFDMRTQHPT---------KG-FASVSEKA-HKSTVWQVRHLPQNRELFLTAGGAGGLH 285 (357)
T ss_dssp ESCSSSSCCEEEEEESTTEEEEEEEEEEETT---------TE-EEEEEEEC-CSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred cCCCCCCCCEEEEECCCCeEEEEeCcCCCcc---------cc-eeeeccCC-CcCCEEEEEECCCCCcEEEEEeCCCcEE
Confidence 466 8999999999999999998654321 11 11123346 889999999999998 899999999999
Q ss_pred EEeccCCCCCCc----------eeeeeeeeeeecccccceeEEEEccCCCCEEE-EEeCCCcEEEEEcCCCC
Q psy14817 77 IFKENPEAGDSD----------MVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA-SCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 77 i~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~d~~v~~wd~~~~~ 137 (138)
+|+++....... ..... .......|...|++++|+|+ +.+|+ +++.|+.|++||+...+
T Consensus 286 iwd~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~v~~~~~s~~-~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 286 LWKYEYPIQRSKKDSEGIEMGVAGSVS-LLQNVTLSTQPISSLDWSPD-KRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEEEECCSCC--CCTTSCCCCCCCEEE-EEEEEECCSSCEEEEEECSS-STTEEEEEETTSEEEEEEECC--
T ss_pred EeecCCCcccccccCCCCccccccccc-eeeccccCCCCeeEEEEcCC-CCeEEEEecCCCcEEEEECCCcc
Confidence 999986541110 00111 22334578899999999999 88777 89999999999998764
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=6.5e-20 Score=117.68 Aligned_cols=135 Identities=16% Similarity=0.190 Sum_probs=93.3
Q ss_pred CccCCC-eEEEeeCCCcEEEeeccCCCCCCCccCC-CCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGS-RLATCSDDATVKIWKEYKPGNSAGIPTP-DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~-~l~t~s~d~~v~iw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~ 78 (138)
|+|+++ +|++|+.|+.|++||++........... .............. |...|.+++|+|++.++++++.|+.|++|
T Consensus 194 ~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~vw 272 (408)
T 4a11_B 194 WSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTA-HNGKVNGLCFTSDGLHLLTVGTDNRMRLW 272 (408)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCS-CSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeecccccc-ccCceeEEEEcCCCCEEEEecCCCeEEEE
Confidence 578888 5999999999999998765421110000 00000011112234 78899999999999999999999999999
Q ss_pred eccCCCCCCce---------------------------------eee----eeeeeeecccccceeEEEEccCCCCEEEE
Q psy14817 79 KENPEAGDSDM---------------------------------VSF----DLVHTEHRAHNQDVNCVAWNPVVPGMLAS 121 (138)
Q Consensus 79 ~~~~~~~~~~~---------------------------------~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 121 (138)
|+..+...... ..+ ........+|...|++++|+|+ +.+|++
T Consensus 273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~s 351 (408)
T 4a11_B 273 NSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSN-FQELYS 351 (408)
T ss_dssp ETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETT-TTEEEE
T ss_pred ECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCC-CCEEEE
Confidence 99875411000 000 0112333578899999999999 999999
Q ss_pred EeCCCcEEEEEcCCCC
Q psy14817 122 CSDDGDVKLWQIKLEN 137 (138)
Q Consensus 122 ~~~d~~v~~wd~~~~~ 137 (138)
++.||.|++||+++.+
T Consensus 352 ~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 352 GSRDCNILAWVPSLYE 367 (408)
T ss_dssp EETTSCEEEEEECC--
T ss_pred ECCCCeEEEEeCCCCC
Confidence 9999999999998764
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.85 E-value=3.9e-20 Score=127.86 Aligned_cols=111 Identities=21% Similarity=0.333 Sum_probs=95.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++++.|+.|++|++... +.+..+.+ |...|.+++|+|+++++++++.|+.|++|++
T Consensus 63 ~s~~~~~l~~~~~dg~i~vw~~~~~---------------~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 126 (814)
T 3mkq_A 63 FIARKNWIIVGSDDFRIRVFNYNTG---------------EKVVDFEA-HPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW 126 (814)
T ss_dssp EEGGGTEEEEEETTSEEEEEETTTC---------------CEEEEEEC-CSSCEEEEEECSSSSEEEEEETTSEEEEEEG
T ss_pred EeCCCCEEEEEeCCCeEEEEECCCC---------------cEEEEEec-CCCCEEEEEEeCCCCEEEEEcCCCEEEEEEC
Confidence 6899999999999999999997543 34667777 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEcc-CCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP-VVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.... ........|...|.+++|+| + +..+++++.|+.|++||++++.
T Consensus 127 ~~~~---------~~~~~~~~~~~~v~~~~~~p~~-~~~l~~~~~dg~v~vwd~~~~~ 174 (814)
T 3mkq_A 127 ENNW---------ALEQTFEGHEHFVMCVAFNPKD-PSTFASGCLDRTVKVWSLGQST 174 (814)
T ss_dssp GGTS---------EEEEEEECCSSCEEEEEEETTE-EEEEEEEETTSEEEEEETTCSS
T ss_pred CCCc---------eEEEEEcCCCCcEEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCc
Confidence 8653 13344457889999999999 6 8899999999999999997654
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.2e-20 Score=119.62 Aligned_cols=111 Identities=18% Similarity=0.360 Sum_probs=93.3
Q ss_pred CccCC-CeEEEeeCCC---cEEEeeccCCCCCCCccCCCCCCceEEeEEec-CCCccCeEEEEEec-CCCeEEEeeCCCc
Q psy14817 1 MIQTG-SRLATCSDDA---TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHGRTIYDISWCH-LTDLIATACGDDA 74 (138)
Q Consensus 1 ~s~~~-~~l~t~s~d~---~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~v~~~~-~~~~~~s~~~d~~ 74 (138)
|+|++ .++++++.|+ .|++||++.... ++..+. + |...|.+++|+| ++.++++++.|+.
T Consensus 222 ~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~--------------~~~~~~~~-~~~~v~~~~~s~~~~~~l~s~~~dg~ 286 (416)
T 2pm9_A 222 WHPKNSTRVATATGSDNDPSILIWDLRNANT--------------PLQTLNQG-HQKGILSLDWCHQDEHLLLSSGRDNT 286 (416)
T ss_dssp ECSSCTTEEEEEECCSSSCCCCEEETTSTTS--------------CSBCCCSC-CSSCEEEEEECSSCSSCEEEEESSSE
T ss_pred ECCCCCCEEEEEECCCCCceEEEEeCCCCCC--------------CcEEeecC-ccCceeEEEeCCCCCCeEEEEeCCCC
Confidence 57886 6899999999 999999875422 134455 5 788999999999 8889999999999
Q ss_pred EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCC-CEEEEEeCCCcEEEEEcCCCC
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP-GMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|++||+.... .......|...|++++|+|+ + .++++++.|+.|++||++...
T Consensus 287 v~~wd~~~~~----------~~~~~~~~~~~v~~~~~s~~-~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 287 VLLWNPESAE----------QLSQFPARGNWCFKTKFAPE-APDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp EEEECSSSCC----------EEEEEECSSSCCCCEEECTT-CTTEEEECCSSSEEEEEESCCCC
T ss_pred EEEeeCCCCc----------cceeecCCCCceEEEEECCC-CCCEEEEEecCCcEEEEEccCCC
Confidence 9999998766 44445578899999999999 6 899999999999999997654
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-19 Score=118.28 Aligned_cols=120 Identities=23% Similarity=0.403 Sum_probs=91.7
Q ss_pred CccCCC-eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec-CCCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~-~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~s~~~d~~i~i~ 78 (138)
|+|+++ +|++|+.||.|++|++...... .....+...+.. |...|.+++|+| ++.+|++++.|+.|++|
T Consensus 189 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~--------~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~ 259 (430)
T 2xyi_A 189 WNPNLNGYLLSASDDHTICLWDINATPKE--------HRVIDAKNIFTG-HTAVVEDVAWHLLHESLFGSVADDQKLMIW 259 (430)
T ss_dssp ECTTSTTEEEEECTTSCEEEEETTSCCBG--------GGEEECSEEECC-CSSCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred eCCCCCCeEEEEeCCCeEEEEeCCCCCCC--------CceeccceeecC-CCCCEeeeEEeCCCCCEEEEEeCCCeEEEE
Confidence 578887 9999999999999998653221 111122455666 889999999999 55699999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|++..... ........|...|++++|+|+...++++++.|+.|++||++..
T Consensus 260 d~~~~~~~-------~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~ 310 (430)
T 2xyi_A 260 DTRNNNTS-------KPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 310 (430)
T ss_dssp ETTCSCSS-------SCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT
T ss_pred ECCCCCCC-------cceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCC
Confidence 99865200 0122234788999999999983447999999999999999873
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.85 E-value=6.7e-20 Score=116.74 Aligned_cols=120 Identities=13% Similarity=0.229 Sum_probs=89.2
Q ss_pred CccCCCeEEEeeCCCc-EEEeeccCCCCCCCccCCCCCCceEEeEEec-CCCccCeEEEEEecCCCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDAT-VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHGRTIYDISWCHLTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~-v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~ 78 (138)
|+|+|++||+|+.|++ |++||++.. +++..+. +.|...|.+++|+|++.++++++.|++|++|
T Consensus 203 ~s~~g~~l~s~s~d~~~v~iwd~~~~---------------~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw 267 (355)
T 3vu4_A 203 LNRKSDMVATCSQDGTIIRVFKTEDG---------------VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVF 267 (355)
T ss_dssp ECTTSSEEEEEETTCSEEEEEETTTC---------------CEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEECCCC---------------cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEE
Confidence 6899999999999998 999997543 4466776 3378999999999999999999999999999
Q ss_pred eccCCCCCCceeeee-------------eeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFD-------------LVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|+............. ...............++|+++ +..+++++.||.+++|++..+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d-~~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 268 EIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISE-SSLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp ESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSS-SEEEEEETTTTEEEEEEEEEE
T ss_pred EccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCC-CCEEEEEeCCCeEEEEEEEcC
Confidence 998653111100000 000011112233467899999 999999999999999997653
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-19 Score=116.95 Aligned_cols=120 Identities=13% Similarity=0.172 Sum_probs=88.0
Q ss_pred CccCCC-eEEEeeCCCcEEEeec----cCCCCCCCccCCCCCCceEEeEEecCC-----CccCeEEEEEecCCCeEEEee
Q psy14817 1 MIQTGS-RLATCSDDATVKIWKE----YKPGNSAGIPTPDNDSVWKCVCTLSGH-----HGRTIYDISWCHLTDLIATAC 70 (138)
Q Consensus 1 ~s~~~~-~l~t~s~d~~v~iw~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~v~~~~~~~~~~s~~ 70 (138)
|+|+++ +||+|+.|+.|++|++ ......... .........+..+ |...|.+++|+|++.++++++
T Consensus 53 ~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 127 (425)
T 1r5m_A 53 WNPLDESILAYGEKNSVARLARIVETDQEGKKYWKL-----TIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGV 127 (425)
T ss_dssp ECSSCTTEEEEEETBTEEEEEEEEEC------CEEE-----EEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEE
T ss_pred ECCCCCcEEEEecCCceEEEEEEecccCCccccccc-----cccccccccccccccccCCCCceEEEEEcCCCCEEEEEe
Confidence 689999 9999999999999998 433210000 0000111112221 577999999999999999999
Q ss_pred CCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 71 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 71 ~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.|+.|++|+.. +. .......|...|.+++|+|+ +.+|++++.|+.|++||+++++
T Consensus 128 ~dg~i~i~~~~-~~----------~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~ 182 (425)
T 1r5m_A 128 ENGELRLWNKT-GA----------LLNVLNFHRAPIVSVKWNKD-GTHIISMDVENVTILWNVISGT 182 (425)
T ss_dssp TTSCEEEEETT-SC----------EEEEECCCCSCEEEEEECTT-SSEEEEEETTCCEEEEETTTTE
T ss_pred CCCeEEEEeCC-CC----------eeeeccCCCccEEEEEECCC-CCEEEEEecCCeEEEEECCCCc
Confidence 99999999933 32 33344578899999999999 9999999999999999997653
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=8.1e-20 Score=114.00 Aligned_cols=118 Identities=17% Similarity=0.284 Sum_probs=87.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEE--ecCCCccCeEEEEEecCCCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT--LSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~ 78 (138)
||+++ +||+| .|++|+|||+... +++.. +.+ |...|.+++|+|+++++++|+.|++|++|
T Consensus 33 WS~~~-~lAvg-~D~tV~iWd~~tg---------------~~~~~~~~~~-~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw 94 (318)
T 4ggc_A 33 WSSGN-VLAVA-LDNSVYLWSASSG---------------DILQLLQMEQ-PGEYISSVAWIKEGNYLAVGTSSAEVQLW 94 (318)
T ss_dssp ECTTS-EEEEE-ETTEEEEEETTTC---------------CEEEEEECCS-TTCCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ECCCC-EEEEE-eCCEEEEEECCCC---------------CEEEEEEecC-CCCeEEEEEECCCCCEEEEEECCCcEEEe
Confidence 46654 77766 5999999997543 23443 344 77889999999999999999999999999
Q ss_pred eccCCCCCC------c-ee-------------------ee-----eeeeeeecccccceeEEEEccCCCCEEEEEeCCCc
Q psy14817 79 KENPEAGDS------D-MV-------------------SF-----DLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGD 127 (138)
Q Consensus 79 ~~~~~~~~~------~-~~-------------------~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 127 (138)
++..++... . .. .. .........|...+..+.+.++ +.++++++.|+.
T Consensus 95 ~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~s~~~d~~ 173 (318)
T 4ggc_A 95 DVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPD-GRHLASGGNDNL 173 (318)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT-SSEEEEEETTSC
T ss_pred ecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCC-CCEEEEEecCcc
Confidence 998764100 0 00 00 0011233467888999999999 999999999999
Q ss_pred EEEEEcCCCC
Q psy14817 128 VKLWQIKLEN 137 (138)
Q Consensus 128 v~~wd~~~~~ 137 (138)
|++||+++++
T Consensus 174 i~iwd~~~~~ 183 (318)
T 4ggc_A 174 VNVWPSAPGE 183 (318)
T ss_dssp EEEEESSCBT
T ss_pred eeEEECCCCc
Confidence 9999998754
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-19 Score=118.18 Aligned_cols=111 Identities=10% Similarity=0.146 Sum_probs=86.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeE-------EecCCCccCeEEEEEecCC-CeEEEeeCC
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC-------TLSGHHGRTIYDISWCHLT-DLIATACGD 72 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~v~~v~~~~~~-~~~~s~~~d 72 (138)
|+|++++|++| .|+.|++||+... .+++. .+.+ |...|.+++|+|++ .++++++.|
T Consensus 185 ~~~~~~~l~s~-~d~~i~iwd~~~~--------------~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s~~~d 248 (447)
T 3dw8_B 185 INSDYETYLSA-DDLRINLWHLEIT--------------DRSFNIVDIKPANMEE-LTEVITAAEFHPNSCNTFVYSSSK 248 (447)
T ss_dssp ECTTSSEEEEE-CSSEEEEEETTEE--------------EEEEEEEECCCSSGGG-CCCCEEEEEECSSCTTEEEEEETT
T ss_pred EcCCCCEEEEe-CCCeEEEEECCCC--------------Cceeeeeecccccccc-cCcceEEEEECCCCCcEEEEEeCC
Confidence 58999999999 7999999997421 12233 2445 88899999999999 899999999
Q ss_pred CcEEEEeccCCCCCCceeeeeeeeeeecccc------------cceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 73 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHN------------QDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 73 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
+.|++||++....... ....+..|. ..|.+++|+|+ +.+|++++. +.|++||++.
T Consensus 249 g~i~iwd~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 249 GTIRLCDMRASALCDR------HSKLFEEPEDPSNRSFFSEIISSISDVKFSHS-GRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp SCEEEEETTTCSSSCT------TCEEECCC-----CCHHHHHTTCEEEEEECTT-SSEEEEEES-SEEEEEETTC
T ss_pred CeEEEEECcCCccccc------eeeEeccCCCccccccccccCceEEEEEECCC-CCEEEEeeC-CeEEEEeCCC
Confidence 9999999987651000 012223444 38999999999 999999998 9999999986
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.84 E-value=6e-20 Score=118.33 Aligned_cols=108 Identities=19% Similarity=0.264 Sum_probs=92.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++++.|+.|++||+.... ++..+.. |...|.++.|+|++ .+++++.|+.|++||+
T Consensus 255 ~~~~~~~l~~~~~d~~i~i~d~~~~~---------------~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~ 317 (425)
T 1r5m_A 255 FNDTNKLLLSASDDGTLRIWHGGNGN---------------SQNCFYG-HSQSIVSASWVGDD-KVISCSMDGSVRLWSL 317 (425)
T ss_dssp EETTTTEEEEEETTSCEEEECSSSBS---------------CSEEECC-CSSCEEEEEEETTT-EEEEEETTSEEEEEET
T ss_pred ECCCCCEEEEEcCCCEEEEEECCCCc---------------cceEecC-CCccEEEEEECCCC-EEEEEeCCCcEEEEEC
Confidence 57899999999999999999976542 2456666 78899999999999 9999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.... .......|...|.+++|+|+ +.+|++++.|+.|++||++++
T Consensus 318 ~~~~----------~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~i~~~~~~ 362 (425)
T 1r5m_A 318 KQNT----------LLALSIVDGVPIFAGRISQD-GQKYAVAFMDGQVNVYDLKKL 362 (425)
T ss_dssp TTTE----------EEEEEECTTCCEEEEEECTT-SSEEEEEETTSCEEEEECHHH
T ss_pred CCCc----------EeEecccCCccEEEEEEcCC-CCEEEEEECCCeEEEEECCCC
Confidence 8765 34444578889999999999 999999999999999998754
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.84 E-value=1e-19 Score=115.20 Aligned_cols=125 Identities=11% Similarity=0.022 Sum_probs=87.8
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCc-----cC---------CCCC-----------------CceEEeEEecCCC
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGI-----PT---------PDND-----------------SVWKCVCTLSGHH 50 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~-----~~---------~~~~-----------------~~~~~~~~~~~~~ 50 (138)
.+++++|++|+.||.|++||+......... .. .... ...+.+..+...|
T Consensus 45 ~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~ 124 (343)
T 3lrv_A 45 YYDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPAIISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDS 124 (343)
T ss_dssp SEEEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCSEEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCC
T ss_pred cCCCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCceEEecCCCeEEEEEccCceEEeecCCcceeEEeecCC
Confidence 456778888888888888887654321100 00 0000 0111233333225
Q ss_pred ccCeEEEEEec--CCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeee-cccccceeEEEEccCCCCEEEEEeCCCc
Q psy14817 51 GRTIYDISWCH--LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH-RAHNQDVNCVAWNPVVPGMLASCSDDGD 127 (138)
Q Consensus 51 ~~~v~~v~~~~--~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 127 (138)
...|.+++|+| ++.++++++.|++|++||++.+. ..... ..+...+++++|+|+ +.+|++|+.|+.
T Consensus 125 ~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~----------~~~~~~~~~~~~i~~~~~~pd-g~~lasg~~dg~ 193 (343)
T 3lrv_A 125 ANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS----------QYIVHSAKSDVEYSSGVLHKD-SLLLALYSPDGI 193 (343)
T ss_dssp SSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC----------EEEEECCCSSCCCCEEEECTT-SCEEEEECTTSC
T ss_pred CCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc----------EEEEEecCCCCceEEEEECCC-CCEEEEEcCCCE
Confidence 67899999999 99999999999999999999766 22222 245567999999999 999999999999
Q ss_pred EEEEEcCCCC
Q psy14817 128 VKLWQIKLEN 137 (138)
Q Consensus 128 v~~wd~~~~~ 137 (138)
|++||+++++
T Consensus 194 i~iwd~~~~~ 203 (343)
T 3lrv_A 194 LDVYNLSSPD 203 (343)
T ss_dssp EEEEESSCTT
T ss_pred EEEEECCCCC
Confidence 9999998875
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-19 Score=129.98 Aligned_cols=109 Identities=29% Similarity=0.496 Sum_probs=95.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC--CCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL--TDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~s~~~d~~i~i~ 78 (138)
|+|++++|++|+.|+.|++||+... +++..+.+ |...|.+++|+|+ +.++++++.|+.|++|
T Consensus 665 ~s~~~~~l~s~~~d~~v~vwd~~~~---------------~~~~~~~~-~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vw 728 (1249)
T 3sfz_A 665 FSSDDSYIATCSADKKVKIWDSATG---------------KLVHTYDE-HSEQVNCCHFTNKSNHLLLATGSNDFFLKLW 728 (1249)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTC---------------CEEEEEEC-CSSCEEEEEECSSSSCCEEEEEETTSCEEEE
T ss_pred EecCCCEEEEEeCCCeEEEEECCCC---------------ceEEEEcC-CCCcEEEEEEecCCCceEEEEEeCCCeEEEE
Confidence 6899999999999999999997543 45777888 8999999999995 4589999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|+..+. ......+|...|++++|+|+ +.++++++.|+.|++||++++
T Consensus 729 d~~~~~----------~~~~~~~h~~~v~~~~~sp~-~~~l~s~s~dg~v~vwd~~~~ 775 (1249)
T 3sfz_A 729 DLNQKE----------CRNTMFGHTNSVNHCRFSPD-DELLASCSADGTLRLWDVRSA 775 (1249)
T ss_dssp ETTSSS----------EEEEECCCSSCEEEEEECSS-TTEEEEEESSSEEEEEEGGGT
T ss_pred ECCCcc----------hhheecCCCCCEEEEEEecC-CCEEEEEECCCeEEEEeCCCC
Confidence 999876 44445689999999999999 999999999999999998765
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.3e-19 Score=117.37 Aligned_cols=107 Identities=24% Similarity=0.370 Sum_probs=92.9
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
+++++++++|+.|+.|++||++.. +++..+.+ |...|.+++|+|++.++++++.|+.|++||+.
T Consensus 277 ~~~~~~l~~~~~d~~i~vwd~~~~---------------~~~~~~~~-~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~ 340 (464)
T 3v7d_B 277 SGHGNIVVSGSYDNTLIVWDVAQM---------------KCLYILSG-HTDRIYSTIYDHERKRCISASMDTTIRIWDLE 340 (464)
T ss_dssp EEETTEEEEEETTSCEEEEETTTT---------------EEEEEECC-CSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred cCCCCEEEEEeCCCeEEEEECCCC---------------cEEEEecC-CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 467899999999999999997533 56778888 89999999999999999999999999999998
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.+. .......|...|.++.|+ +.++++++.|+.|++||++++.
T Consensus 341 ~~~----------~~~~~~~h~~~v~~~~~~---~~~l~s~s~dg~v~vwd~~~~~ 383 (464)
T 3v7d_B 341 NGE----------LMYTLQGHTALVGLLRLS---DKFLVSAAADGSIRGWDANDYS 383 (464)
T ss_dssp TTE----------EEEEECCCSSCEEEEEEC---SSEEEEEETTSEEEEEETTTCC
T ss_pred CCc----------EEEEEeCCCCcEEEEEEc---CCEEEEEeCCCcEEEEECCCCc
Confidence 765 444556899999999995 5799999999999999998753
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.84 E-value=9.1e-20 Score=114.87 Aligned_cols=109 Identities=14% Similarity=0.029 Sum_probs=90.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~ 79 (138)
|+|++++|++++.|+.|++|++..... ......+.. |...|.+++|+|++. ++++++.|+.|++|+
T Consensus 19 ~s~~~~~l~~~~~d~~v~iw~~~~~~~------------~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 19 IIPSKSLLLITSWDGSLTVYKFDIQAK------------NVDLLQSLR-YKHPLLCCNFIDNTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp EEGGGTEEEEEETTSEEEEEEEETTTT------------EEEEEEEEE-CSSCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred EcCCCCEEEEEcCCCeEEEEEeCCCCc------------cccceeeee-cCCceEEEEECCCCCcEEEEEcCCCeEEEEE
Confidence 678999999999999999999865431 122334445 789999999999999 999999999999999
Q ss_pred c-cCCCCCCceeeeeeeeeeecc--cccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 80 E-NPEAGDSDMVSFDLVHTEHRA--HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 80 ~-~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
+ .... . ..... |...|.+++|+| +..+++++.|+.|++||+++
T Consensus 86 ~~~~~~----------~-~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~ 131 (342)
T 1yfq_A 86 LIGSPS----------F-QALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRN 131 (342)
T ss_dssp SSSSSS----------E-EECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHH
T ss_pred eccCCc----------e-EeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccc
Confidence 9 7654 2 33346 889999999999 78999999999999999875
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2.7e-19 Score=116.10 Aligned_cols=108 Identities=19% Similarity=0.332 Sum_probs=86.0
Q ss_pred CccCC-CeEEE--eeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee--CCCcE
Q psy14817 1 MIQTG-SRLAT--CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC--GDDAI 75 (138)
Q Consensus 1 ~s~~~-~~l~t--~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~d~~i 75 (138)
|+|.+ .++++ |+.|++|++||+... +++..+.. ...+.++.|++++..+++++ .|+.|
T Consensus 284 ~~p~~~~~la~~~gs~D~~I~iwd~~t~---------------~~~~~~~~--~~~v~~~~~~~~~~~lv~~sg~~d~~I 346 (420)
T 4gga_A 284 WCPWQSNVLATGGGTSDRHIRIWNVCSG---------------ACLSAVDA--HSQVCSILWSPHYKELISGHGFAQNQL 346 (420)
T ss_dssp ECTTCTTEEEEEECTTTCEEEEEETTTT---------------EEEEEEEC--SSCEEEEEEETTTTEEEEEECTTTCCE
T ss_pred eCCCcccEEEEEeecCCCEEEEEeCCcc---------------ccceeecc--ccceeeeeecCCCCeEEEEEecCCCEE
Confidence 34544 45554 568999999997543 44566554 46789999999999777654 78999
Q ss_pred EEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
++||+..+. ....+.+|...|++++|+|+ +.+|++|+.|++|++||+...
T Consensus 347 ~iwd~~~~~----------~v~~l~gH~~~V~~l~~spd-g~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 347 VIWKYPTMA----------KVAELKGHTSRVLSLTMSPD-GATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp EEEETTTCC----------EEEEECCCSSCEEEEEECTT-SSCEEEEETTTEEEEECCSCS
T ss_pred EEEECCCCc----------EEEEEcCCCCCEEEEEEcCC-CCEEEEEecCCeEEEEECCCC
Confidence 999998876 45556689999999999999 999999999999999998653
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.6e-19 Score=119.87 Aligned_cols=116 Identities=9% Similarity=0.121 Sum_probs=86.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEe----cCCCccCeEEEEEecCCCeEEEeeCCCcEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL----SGHHGRTIYDISWCHLTDLIATACGDDAIR 76 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~ 76 (138)
|||+|++||+|+.||+|+||++...... ....-.+.++ .+ |...|.+++|+|++ +++++.|++++
T Consensus 137 fSPDG~~LAsgs~DGtVkIWd~~~~~l~--------~~~~i~l~ti~~~~~g-h~~~V~sVawSPdg--Laass~D~tVr 205 (588)
T 2j04_A 137 WNPIESSIVVGNEDGELQFFSIRKNSEN--------TPEFYFESSIRLSDAG-SKDWVTHIVWYEDV--LVAALSNNSVF 205 (588)
T ss_dssp ECSSSSCEEEEETTSEEEEEECCCCTTT--------CCCCEEEEEEECSCTT-CCCCEEEEEEETTE--EEEEETTCCEE
T ss_pred EcCCCCEEEEEcCCCEEEEEECCCCccc--------cccceeeeeeeccccc-ccccEEEEEEcCCc--EEEEeCCCeEE
Confidence 7999999999999999999998653210 0111134554 45 77899999999999 88889999999
Q ss_pred EEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 77 IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+|++..... . .........|...|.+++|+ ++.+++++ ++.|++||+.+++
T Consensus 206 lWd~~~~~~---~---~~~~tL~~~h~~~V~svaFs---g~~LASa~-~~tIkLWd~~~~~ 256 (588)
T 2j04_A 206 SMTVSASSH---Q---PVSRMIQNASRRKITDLKIV---DYKVVLTC-PGYVHKIDLKNYS 256 (588)
T ss_dssp EECCCSSSS---C---CCEEEEECCCSSCCCCEEEE---TTEEEEEC-SSEEEEEETTTTE
T ss_pred EEECCCCcc---c---cceeeecccccCcEEEEEEE---CCEEEEEe-CCeEEEEECCCCe
Confidence 999986540 0 00011223677899999998 47888887 6999999988764
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.3e-19 Score=117.33 Aligned_cols=118 Identities=12% Similarity=0.026 Sum_probs=90.5
Q ss_pred CccCCCeE-EEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC-CCccCeEEEEEecCCCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-HHGRTIYDISWCHLTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l-~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~ 78 (138)
|+|++++| ++|+.|+.|++|++..... +++..+.. .|...|.+++|+|++.++++++.++.+++|
T Consensus 110 ~s~d~~~l~~~~~~dg~v~iwd~~~~~~-------------~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~ 176 (450)
T 2vdu_B 110 LTSDESRLIACADSDKSLLVFDVDKTSK-------------NVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSI 176 (450)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEEECSSSS-------------SCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EcCCCCEEEEEECCCCeEEEEECcCCCC-------------ceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEE
Confidence 68999996 9999999999999862111 12333331 156789999999999999999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccC--CCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV--VPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
++........ ......+|...|++++|+|+ .+.+|++++.|+.|++||+++++
T Consensus 177 ~~~~~~~~~~------~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~ 231 (450)
T 2vdu_B 177 DINSIPEEKF------TQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF 231 (450)
T ss_dssp ETTSCCCSSC------CCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT
T ss_pred ecCCcccccc------cceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc
Confidence 9986551100 11133478899999999996 26689999999999999998764
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.83 E-value=8.2e-20 Score=117.75 Aligned_cols=117 Identities=14% Similarity=0.172 Sum_probs=84.4
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEeccC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENP 82 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~ 82 (138)
++++||+|+.|++|+|||+... .++..+.. |...+.+++|+|++. ++++++.|++|++||+..
T Consensus 155 d~~~las~s~D~tv~~Wd~~~~---------------~~~~~~~~-~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t 218 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTDE---------------GPILAGYP-LSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTL 218 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEETT---------------EEEEEEEE-CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred CCCEEEEEECCCeEEEEECCCC---------------ceeeeecC-CCCCcEEEEECCCCCceEEecCCCCEEEEEECCC
Confidence 7899999999999999998543 33555556 788999999999886 899999999999999987
Q ss_pred CCCCCceee---------eee------eeeeecccccceeEEEEc-cCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 83 EAGDSDMVS---------FDL------VHTEHRAHNQDVNCVAWN-PVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 83 ~~~~~~~~~---------~~~------~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+........ ... .......|...+.++.|. |+ +..+++++.|+.+++||+..++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~d-g~~l~s~s~d~~i~vwd~~~~~ 288 (393)
T 4gq1_A 219 NLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSD-GSGILAMCKSGAWLRWNLFANN 288 (393)
T ss_dssp CC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTT-TCEEEEECTTSEEEEEEC----
T ss_pred CcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCC-CCEEEEEeCCCCEEEEECccCC
Confidence 652111000 000 011123577889999987 56 9999999999999999987653
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-18 Score=111.97 Aligned_cols=118 Identities=20% Similarity=0.312 Sum_probs=91.6
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEecc
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKEN 81 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~ 81 (138)
+++.++++++.|+.|++||++.... +..+.. |...|.+++|+|++. ++++++.|+.|++||++
T Consensus 154 ~~~~~~~~~~~~~~v~~~d~~~~~~---------------~~~~~~-~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~ 217 (408)
T 4a11_B 154 TKHCLVAVGTRGPKVQLCDLKSGSC---------------SHILQG-HRQEILAVSWSPRYDYILATASADSRVKLWDVR 217 (408)
T ss_dssp SSCCEEEEEESSSSEEEEESSSSCC---------------CEEECC-CCSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred CCCcEEEEEcCCCeEEEEeCCCcce---------------eeeecC-CCCcEEEEEECCCCCcEEEEEcCCCcEEEEECC
Confidence 4667999999999999999865432 566677 889999999999998 58999999999999998
Q ss_pred CCCCCCcee------eeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMV------SFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
......... ...........|...|.+++|+|+ +.+|++++.|+.|++||+++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 218 RASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSD-GLHLLTVGTDNRMRLWNSSNGE 278 (408)
T ss_dssp CSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCC
T ss_pred CCCcccccccccccccceeeccccccccCceeEEEEcCC-CCEEEEecCCCeEEEEECCCCc
Confidence 654111000 000011122468889999999999 9999999999999999998754
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=8.5e-20 Score=115.42 Aligned_cols=113 Identities=12% Similarity=0.213 Sum_probs=88.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec---CCCeEEEeeCCCcEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH---LTDLIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~s~~~d~~i~i 77 (138)
|+|++++|++++.|+.|++||++.. +... ... |...|.+++|+| ++.++++++.|+.|++
T Consensus 176 ~~~~~~~l~~~~~d~~i~i~d~~~~---------------~~~~-~~~-~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i 238 (357)
T 3i2n_A 176 YNQEERVVCAGYDNGDIKLFDLRNM---------------ALRW-ETN-IKNGVCSLEFDRKDISMNKLVATSLEGKFHV 238 (357)
T ss_dssp CC-CCCEEEEEETTSEEEEEETTTT---------------EEEE-EEE-CSSCEEEEEESCSSSSCCEEEEEESTTEEEE
T ss_pred cCCCCCEEEEEccCCeEEEEECccC---------------ceee-ecC-CCCceEEEEcCCCCCCCCEEEEECCCCeEEE
Confidence 5789999999999999999997543 2222 233 678999999999 8899999999999999
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCC-EEEEEeCCCcEEEEEcCCC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~d~~v~~wd~~~~ 136 (138)
||++....... . .......|...|++++|+|+ +. ++++++.|+.|++||++.+
T Consensus 239 ~d~~~~~~~~~---~--~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 239 FDMRTQHPTKG---F--ASVSEKAHKSTVWQVRHLPQ-NRELFLTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp EEEEEEETTTE---E--EEEEEECCSSCEEEEEEETT-EEEEEEEEETTSEEEEEEEECC
T ss_pred EeCcCCCcccc---e--eeeccCCCcCCEEEEEECCC-CCcEEEEEeCCCcEEEeecCCC
Confidence 99986541100 0 11122378899999999998 76 8999999999999998754
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.5e-19 Score=113.35 Aligned_cols=109 Identities=19% Similarity=0.350 Sum_probs=91.0
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
++++|++|+.|+.|++||++... ..+..+.. |...|.+++|+|++.++++++.|+.|++||+...
T Consensus 185 ~~~~l~~~~~dg~i~i~d~~~~~--------------~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 249 (401)
T 4aez_A 185 NRHVLSSGSRSGAIHHHDVRIAN--------------HQIGTLQG-HSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS 249 (401)
T ss_dssp ETTEEEEEETTSEEEEEETTSSS--------------CEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTCS
T ss_pred CCCEEEEEcCCCCEEEEecccCc--------------ceeeEEcC-CCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCC
Confidence 57899999999999999985322 23566777 8999999999999999999999999999999876
Q ss_pred CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe--CCCcEEEEEcCCCC
Q psy14817 84 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS--DDGDVKLWQIKLEN 137 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d~~v~~wd~~~~~ 137 (138)
. .......|...|.+++|+|+...++++++ .|+.|++||+++++
T Consensus 250 ~----------~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~ 295 (401)
T 4aez_A 250 I----------PKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA 295 (401)
T ss_dssp S----------EEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC
T ss_pred C----------ccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC
Confidence 5 33444578899999999998456777765 79999999998764
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.3e-19 Score=114.40 Aligned_cols=112 Identities=21% Similarity=0.295 Sum_probs=91.7
Q ss_pred CccC-CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC-----CccCeEEEEEecCC-CeEEEeeCCC
Q psy14817 1 MIQT-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-----HGRTIYDISWCHLT-DLIATACGDD 73 (138)
Q Consensus 1 ~s~~-~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~v~~~~~~-~~~~s~~~d~ 73 (138)
|+|+ +++|++++.|+.|++||++.. +++..+..+ |...+.+++|+|++ .++++++.|+
T Consensus 173 ~~~~~~~~l~~~~~dg~v~iwd~~~~---------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 237 (416)
T 2pm9_A 173 WNQSLAHVFASAGSSNFASIWDLKAK---------------KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSD 237 (416)
T ss_dssp ECSSCTTEEEEESSSSCEEEEETTTT---------------EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCS
T ss_pred eCCCCCcEEEEEcCCCCEEEEECCCC---------------CcceEEeccccccccCCceEEEEECCCCCCEEEEEECCC
Confidence 5777 789999999999999997543 345555551 17889999999998 4899999998
Q ss_pred ---cEEEEeccCCCCCCceeeeeeeeeeec-ccccceeEEEEcc-CCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 74 ---AIRIFKENPEAGDSDMVSFDLVHTEHR-AHNQDVNCVAWNP-VVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 74 ---~i~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.|++||++... ....... .|...|++++|+| + +.+|++++.|+.|++||+++++
T Consensus 238 ~~~~i~~~d~~~~~---------~~~~~~~~~~~~~v~~~~~s~~~-~~~l~s~~~dg~v~~wd~~~~~ 296 (416)
T 2pm9_A 238 NDPSILIWDLRNAN---------TPLQTLNQGHQKGILSLDWCHQD-EHLLLSSGRDNTVLLWNPESAE 296 (416)
T ss_dssp SSCCCCEEETTSTT---------SCSBCCCSCCSSCEEEEEECSSC-SSCEEEEESSSEEEEECSSSCC
T ss_pred CCceEEEEeCCCCC---------CCcEEeecCccCceeEEEeCCCC-CCeEEEEeCCCCEEEeeCCCCc
Confidence 99999998753 1333444 7889999999999 6 9999999999999999998764
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.82 E-value=6.3e-19 Score=111.71 Aligned_cols=108 Identities=17% Similarity=0.160 Sum_probs=91.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCC-------
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD------- 73 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~------- 73 (138)
|+|++++|++++.|+.|++||++.. +.+..+. +...+..+.|+|++.++++++.++
T Consensus 226 ~~~~~~~l~~~~~d~~i~v~d~~~~---------------~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 288 (369)
T 3zwl_B 226 FSPDLTYFITSSRDTNSFLVDVSTL---------------QVLKKYE--TDCPLNTAVITPLKEFIILGGGQEAKDVTTT 288 (369)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTC---------------CEEEEEE--CSSCEEEEEECSSSSEEEEEECCC-------
T ss_pred ECCCCCEEEEecCCceEEEEECCCC---------------ceeeeec--CCCCceeEEecCCCceEEEeecCCCceEEEE
Confidence 5899999999999999999997543 2344444 467899999999999999999888
Q ss_pred -------cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 74 -------AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 74 -------~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.+++|+..... .......|...|++++|+|+ +++|++++.|+.|++|+++.+
T Consensus 289 ~~~~~~~~i~~~d~~~~~----------~~~~~~~~~~~v~~~~~s~~-~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 289 SANEGKFEARFYHKIFEE----------EIGRVQGHFGPLNTVAISPQ-GTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp ------CEEEEEETTTCC----------EEEEEECCSSCEEEEEECTT-SSEEEEEETTSEEEEEEECHH
T ss_pred ecCCCcceeEEEecCCCc----------chhheecccCcEEEEEECCC-CCEEEEEcCCCeEEEEECccc
Confidence 79999988776 44445678999999999999 999999999999999998754
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.82 E-value=6.6e-19 Score=112.60 Aligned_cols=115 Identities=9% Similarity=0.031 Sum_probs=85.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCC----cEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD----AIR 76 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~----~i~ 76 (138)
|+|+|+++++++.|+.+ +|+...... ........ |...|.+++|+|++..+++++.|+ .++
T Consensus 184 fspdg~~l~s~s~~~~~-~~~~~~~~~-------------~~~~~~~~-~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~ 248 (365)
T 4h5i_A 184 FSTDGKVVAYITGSSLE-VISTVTGSC-------------IARKTDFD-KNWSLSKINFIADDTVLIAASLKKGKGIVLT 248 (365)
T ss_dssp ECTTSSEEEEECSSCEE-EEETTTCCE-------------EEEECCCC-TTEEEEEEEEEETTEEEEEEEESSSCCEEEE
T ss_pred EccCCceEEeccceeEE-EEEeccCcc-------------eeeeecCC-CCCCEEEEEEcCCCCEEEEEecCCcceeEEe
Confidence 68999999999866554 555322111 11223344 788899999999999999998887 578
Q ss_pred EEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 77 IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+|++.... ...........|...|++++|+|+ +++|++|+.|++|++||+++++
T Consensus 249 ~~~~~~~~------~~~~~~~~~~~~~~~V~~~~~Spd-g~~lasgs~D~~V~iwd~~~~~ 302 (365)
T 4h5i_A 249 KISIKSGN------TSVLRSKQVTNRFKGITSMDVDMK-GELAVLASNDNSIALVKLKDLS 302 (365)
T ss_dssp EEEEETTE------EEEEEEEEEESSCSCEEEEEECTT-SCEEEEEETTSCEEEEETTTTE
T ss_pred ecccccce------ecceeeeeecCCCCCeEeEEECCC-CCceEEEcCCCEEEEEECCCCc
Confidence 88877543 111112334578889999999999 9999999999999999998764
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.5e-19 Score=115.77 Aligned_cols=122 Identities=12% Similarity=0.148 Sum_probs=89.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC---CccCeEEEE--EecCCCeEEEeeCCCcE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH---HGRTIYDIS--WCHLTDLIATACGDDAI 75 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~v~--~~~~~~~~~s~~~d~~i 75 (138)
|+|++++|++|+.|+.|++||+......... ......++..+... +...+.++. +++++.++++++.|+.|
T Consensus 119 ~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i 194 (437)
T 3gre_A 119 MIPNFDAFAVSSKDGQIIVLKVNHYQQESEV----KFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRV 194 (437)
T ss_dssp ECTTSSEEEEEETTSEEEEEEEEEEEETTEE----EEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEE
T ss_pred EeCCCCEEEEEeCCCEEEEEEeccccCCcee----eccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeE
Confidence 5789999999999999999998421000000 00011223333221 345677777 55788899999999999
Q ss_pred EEEeccCCCCCCceeeeeeeeeeecc--cccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEHRA--HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
++||++... ....... |...|++++|+|+ +.+|++++.|+.|++||+++++
T Consensus 195 ~iwd~~~~~----------~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~dg~i~iwd~~~~~ 247 (437)
T 3gre_A 195 IIFDIRTLE----------RLQIIENSPRHGAVSSICIDEE-CCVLILGTTRGIIDIWDIRFNV 247 (437)
T ss_dssp EEEETTTCC----------EEEEEECCGGGCCEEEEEECTT-SCEEEEEETTSCEEEEETTTTE
T ss_pred EEEeCCCCe----------eeEEEccCCCCCceEEEEECCC-CCEEEEEcCCCeEEEEEcCCcc
Confidence 999998766 3333334 7889999999999 9999999999999999998754
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-18 Score=116.35 Aligned_cols=109 Identities=16% Similarity=0.296 Sum_probs=93.8
Q ss_pred CccCCC-eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCcc---CeEEEEEecC-CCeEEEeeCCCcE
Q psy14817 1 MIQTGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR---TIYDISWCHL-TDLIATACGDDAI 75 (138)
Q Consensus 1 ~s~~~~-~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~v~~~~~-~~~~~s~~~d~~i 75 (138)
|+|+++ .+++++.|+.|++||+. ..+++..+.. |.. .|.+++|+|+ +.++++++.|+.|
T Consensus 168 ~~~~~~~~l~~~~~d~~v~vwd~~---------------~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 231 (615)
T 1pgu_A 168 LKQSRPMRSMTVGDDGSVVFYQGP---------------PFKFSASDRT-HHKQGSFVRDVEFSPDSGEFVITVGSDRKI 231 (615)
T ss_dssp ECSSSSCEEEEEETTTEEEEEETT---------------TBEEEEEECS-SSCTTCCEEEEEECSTTCCEEEEEETTCCE
T ss_pred ECCCCCcEEEEEeCCCcEEEEeCC---------------Ccceeeeecc-cCCCCceEEEEEECCCCCCEEEEEeCCCeE
Confidence 578887 89999999999999953 2356778887 788 9999999999 9999999999999
Q ss_pred EEEeccCCCCCCceeeeeeeeeee-c---ccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEH-R---AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
++||+..+. ..... . .|...|.+++|+ + +.++++++.|+.|++||+++++
T Consensus 232 ~vwd~~~~~----------~~~~~~~~~~~~~~~v~~~~~~-~-~~~l~~~~~d~~i~~wd~~~~~ 285 (615)
T 1pgu_A 232 SCFDGKSGE----------FLKYIEDDQEPVQGGIFALSWL-D-SQKFATVGADATIRVWDVTTSK 285 (615)
T ss_dssp EEEETTTCC----------EEEECCBTTBCCCSCEEEEEES-S-SSEEEEEETTSEEEEEETTTTE
T ss_pred EEEECCCCC----------EeEEecccccccCCceEEEEEc-C-CCEEEEEcCCCcEEEEECCCCc
Confidence 999998766 33333 4 788999999999 7 9999999999999999998653
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.82 E-value=9.8e-19 Score=108.81 Aligned_cols=104 Identities=22% Similarity=0.425 Sum_probs=88.8
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
+++++++++.|+.|++||.. +....+...|...+.+++|+|++. +++++.|+.|++||++..
T Consensus 154 ~~~~l~~~~~d~~i~i~d~~-----------------~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~ 215 (313)
T 3odt_A 154 SENKFLTASADKTIKLWQND-----------------KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTG 215 (313)
T ss_dssp TTTEEEEEETTSCEEEEETT-----------------EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTC
T ss_pred CCCEEEEEECCCCEEEEecC-----------------ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCch
Confidence 88999999999999999932 335555555788999999999988 899999999999999876
Q ss_pred CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 84 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
. .......|...|++++|+|+ + .+++++.|+.|++||+++++
T Consensus 216 ~----------~~~~~~~~~~~i~~~~~~~~-~-~l~~~~~dg~v~iwd~~~~~ 257 (313)
T 3odt_A 216 D----------VLRTYEGHESFVYCIKLLPN-G-DIVSCGEDRTVRIWSKENGS 257 (313)
T ss_dssp C----------EEEEEECCSSCEEEEEECTT-S-CEEEEETTSEEEEECTTTCC
T ss_pred h----------hhhhhhcCCceEEEEEEecC-C-CEEEEecCCEEEEEECCCCc
Confidence 6 44445578899999999998 6 68899999999999998764
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.5e-19 Score=112.37 Aligned_cols=67 Identities=19% Similarity=0.374 Sum_probs=56.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEE--ecCCCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW--CHLTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~--~~~~~~~~s~~~d~~i~i~ 78 (138)
|+|++++|++++.|+.|++||+... +.+. +.. |...|.+++| ++++.++++++.|+.|++|
T Consensus 94 ~~~~~~~l~s~~~dg~v~iwd~~~~---------------~~~~-~~~-~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vw 156 (368)
T 3mmy_A 94 WSDDGSKVFTASCDKTAKMWDLSSN---------------QAIQ-IAQ-HDAPVKTIHWIKAPNYSCVMTGSWDKTLKFW 156 (368)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTT---------------EEEE-EEE-CSSCEEEEEEEECSSCEEEEEEETTSEEEEE
T ss_pred ECcCCCEEEEEcCCCcEEEEEcCCC---------------Ccee-ecc-ccCceEEEEEEeCCCCCEEEEccCCCcEEEE
Confidence 6899999999999999999997543 2233 344 7899999999 8888899999999999999
Q ss_pred eccCCC
Q psy14817 79 KENPEA 84 (138)
Q Consensus 79 ~~~~~~ 84 (138)
|++...
T Consensus 157 d~~~~~ 162 (368)
T 3mmy_A 157 DTRSSN 162 (368)
T ss_dssp CSSCSS
T ss_pred ECCCCc
Confidence 998654
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.81 E-value=7.7e-19 Score=121.20 Aligned_cols=114 Identities=24% Similarity=0.452 Sum_probs=93.6
Q ss_pred CccC--CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecC--CCeEEEeeCCCcEE
Q psy14817 1 MIQT--GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL--TDLIATACGDDAIR 76 (138)
Q Consensus 1 ~s~~--~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~s~~~d~~i~ 76 (138)
|+|+ +++|++|+.||.|++||+... .+..+..+.. |...|.+++|+|+ +..+++++.|+.|+
T Consensus 61 ~s~~~~~~~l~s~s~Dg~I~vwd~~~~-------------~~~~~~~~~~-h~~~V~~v~~sp~~~~~~l~sgs~dg~I~ 126 (753)
T 3jro_A 61 WAHPKFGTILASCSYDGKVLIWKEENG-------------RWSQIAVHAV-HSASVNSVQWAPHEYGPLLLVASSDGKVS 126 (753)
T ss_dssp ECCTTSCSEEEEEETTSCEEEEEEETT-------------EEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred ecCCCCCCEEEEEeCCCeEEEEECCCC-------------cccccccccC-CCCCeEEEEECCCCCCCEEEEEeCCCcEE
Confidence 4566 899999999999999998543 2245677777 8999999999999 88999999999999
Q ss_pred EEeccCCCCCCceeeeeeeeeeecccccceeEEEEccC------------CCCEEEEEeCCCcEEEEEcCCC
Q psy14817 77 IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV------------VPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------------~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+||+...... .......|...|.+++|+|. ++..+++++.||.|++||++++
T Consensus 127 vwdl~~~~~~--------~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~ 190 (753)
T 3jro_A 127 VVEFKENGTT--------SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSD 190 (753)
T ss_dssp EEECCSSSCC--------CCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETT
T ss_pred EEEeecCCCc--------ceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCC
Confidence 9999876310 12223478889999999993 2889999999999999999765
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-18 Score=110.37 Aligned_cols=111 Identities=19% Similarity=0.335 Sum_probs=85.3
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEec-CCCccCeEEEEEecC----CCeEEEeeCCCcEEEEe
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHGRTIYDISWCHL----TDLIATACGDDAIRIFK 79 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~v~~~~~----~~~~~s~~~d~~i~i~~ 79 (138)
...+++++.++.|++|++..... ...+..+. ..|...|.+++|+|+ +.++++++.|+.|++||
T Consensus 34 ~~~~~~~~~~~~v~vw~~~~~~~------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d 101 (366)
T 3k26_A 34 DPLVFATVGSNRVTLYECHSQGE------------IRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIIN 101 (366)
T ss_dssp SCEEEEEEETTEEEEEEECGGGC------------EEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEEC
T ss_pred CceEEEECCCCEEEEEEcCCCcE------------EEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEE
Confidence 44566666677999999864322 12222222 125678999999999 56899999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+..+. .......|...|.+++|+|+++.+|++++.|+.|++||+++++
T Consensus 102 ~~~~~----------~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 149 (366)
T 3k26_A 102 PITMQ----------CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDT 149 (366)
T ss_dssp TTTCC----------EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTE
T ss_pred chhce----------EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCe
Confidence 98766 3444557999999999999339999999999999999998754
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.80 E-value=3.9e-18 Score=111.04 Aligned_cols=105 Identities=22% Similarity=0.472 Sum_probs=89.2
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
++++++|++|+.|+.|++||+... +++..+.+ |...|.++.| ++..+++|+.||.|++||+.
T Consensus 140 ~~d~~~l~~g~~dg~i~iwd~~~~---------------~~~~~~~~-h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~ 201 (435)
T 1p22_A 140 QYDDQKIVSGLRDNTIKIWDKNTL---------------ECKRILTG-HTGSVLCLQY--DERVIITGSSDSTVRVWDVN 201 (435)
T ss_dssp ECCSSEEEEEESSSCEEEEESSSC---------------CEEEEECC-CSSCEEEEEC--CSSEEEEEETTSCEEEEESS
T ss_pred EECCCEEEEEeCCCeEEEEeCCCC---------------eEEEEEcC-CCCcEEEEEE--CCCEEEEEcCCCeEEEEECC
Confidence 457899999999999999997433 44677788 8999999998 68899999999999999999
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.+. .......|...|.+++|+ +..+++++.|+.|++||+++++
T Consensus 202 ~~~----------~~~~~~~h~~~v~~l~~~---~~~l~s~s~dg~i~vwd~~~~~ 244 (435)
T 1p22_A 202 TGE----------MLNTLIHHCEAVLHLRFN---NGMMVTCSKDRSIAVWDMASPT 244 (435)
T ss_dssp SCC----------EEEEECCCCSCEEEEECC---TTEEEEEETTSCEEEEECSSSS
T ss_pred CCc----------EEEEEcCCCCcEEEEEEc---CCEEEEeeCCCcEEEEeCCCCC
Confidence 876 444455789999999995 4599999999999999998754
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2.1e-18 Score=108.63 Aligned_cols=114 Identities=16% Similarity=0.212 Sum_probs=85.3
Q ss_pred ccCCCeEEEeeCCCcEEEeeccC-CCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec-CCCeEEEeeCCCcEEEEe
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYK-PGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATACGDDAIRIFK 79 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~s~~~d~~i~i~~ 79 (138)
+|++ +++++.|+.|++||++. .... ....... |...+.+++|+| ++.++++++.|+.+++|+
T Consensus 159 ~~~~--l~~~~~d~~i~i~d~~~~~~~~-------------~~~~~~~-~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~ 222 (342)
T 1yfq_A 159 NSSR--LIVGMNNSQVQWFRLPLCEDDN-------------GTIEESG-LKYQIRDVALLPKEQEGYACSSIDGRVAVEF 222 (342)
T ss_dssp CSSE--EEEEESTTEEEEEESSCCTTCC-------------CEEEECS-CSSCEEEEEECSGGGCEEEEEETTSEEEEEE
T ss_pred cCCc--EEEEeCCCeEEEEECCcccccc-------------ceeeecC-CCCceeEEEECCCCCCEEEEEecCCcEEEEE
Confidence 4444 99999999999999865 3221 1122233 778999999999 999999999999999999
Q ss_pred ccCCCCC-Cceeeeeeeeeeeccc---------ccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 80 ENPEAGD-SDMVSFDLVHTEHRAH---------NQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~-~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
++..... ... ....+..| ...|.+++|+|+ +.+|++++.|+.|++||+++++
T Consensus 223 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 223 FDDQGDDYNSS-----KRFAFRCHRLNLKDTNLAYPVNSIEFSPR-HKFLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp CCTTCCSTTCT-----TCEEEECCCCCTTCCSSCCCEEEEEECTT-TCCEEEEETTSCEEEEETTTTE
T ss_pred EcCCCcccccc-----cceeeecccccccccccceeEEEEEEcCC-CCEEEEecCCceEEEEcCccHh
Confidence 9865100 000 11122233 449999999999 9999999999999999998764
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-17 Score=107.98 Aligned_cols=109 Identities=21% Similarity=0.369 Sum_probs=93.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|+|++||+|+.|+.|++||+... +++..+.+ |...+.++.++ +..+++|+.|+.+++|+.
T Consensus 155 fspdg~~lasgs~Dg~v~iWd~~~~---------------~~~~~~~~-h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~ 216 (420)
T 4gga_A 155 WIKEGNYLAVGTSSAEVQLWDVQQQ---------------KRLRNMTS-HSARVGSLSWN--SYILSSGSRSGHIHHHDV 216 (420)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTT---------------EEEEEECC-CSSCEEEEEEE--TTEEEEEETTSEEEEEET
T ss_pred ECCCCCEEEEEECCCeEEEEEcCCC---------------cEEEEEeC-CCCceEEEeeC--CCEEEEEeCCCceeEeee
Confidence 6899999999999999999997433 56788888 89999988775 679999999999999998
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.... .....+..|...+..+.++|+ +.++++++.|+.+++|+...++
T Consensus 217 ~~~~---------~~~~~~~~h~~~~~~~~~~~~-g~~l~s~~~D~~v~i~~~~~~~ 263 (420)
T 4gga_A 217 RVAE---------HHVATLSGHSQEVCGLRWAPD-GRHLASGGNDNLVNVWPSAPGE 263 (420)
T ss_dssp TSSS---------CEEEEEECCSSCEEEEEECTT-SSEEEEEETTSCEEEEESSCCS
T ss_pred cccc---------eeeEEecccccceeeeeecCC-CCeeeeeeccccceEEeecccc
Confidence 8654 133344588999999999999 9999999999999999987653
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.79 E-value=5.5e-18 Score=110.53 Aligned_cols=105 Identities=23% Similarity=0.481 Sum_probs=84.5
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
+++|++|++|+.||.|++||+... +++..+.+ |...|.++.|+ +..+++++.|++|++||+.
T Consensus 126 ~~~g~~l~sg~~dg~i~vwd~~~~---------------~~~~~~~~-h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~ 187 (445)
T 2ovr_B 126 QFCGNRIVSGSDDNTLKVWSAVTG---------------KCLRTLVG-HTGGVWSSQMR--DNIIISGSTDRTLKVWNAE 187 (445)
T ss_dssp EEETTEEEEEETTSCEEEEETTTC---------------CEEEECCC-CSSCEEEEEEE--TTEEEEEETTSCEEEEETT
T ss_pred EEcCCEEEEEECCCcEEEEECCCC---------------cEEEEEcC-CCCCEEEEEec--CCEEEEEeCCCeEEEEECC
Confidence 467899999999999999997433 44677777 88999999997 5699999999999999998
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.+. .......|...|.++.++ +..+++++.|+.|++||+++++
T Consensus 188 ~~~----------~~~~~~~h~~~v~~~~~~---~~~l~s~s~dg~i~~wd~~~~~ 230 (445)
T 2ovr_B 188 TGE----------CIHTLYGHTSTVRCMHLH---EKRVVSGSRDATLRVWDIETGQ 230 (445)
T ss_dssp TTE----------EEEEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEESSSCC
T ss_pred cCc----------EEEEECCCCCcEEEEEec---CCEEEEEeCCCEEEEEECCCCc
Confidence 765 334445788888888884 4578888888888888887654
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.6e-17 Score=108.14 Aligned_cols=102 Identities=25% Similarity=0.455 Sum_probs=87.0
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
+++++++|+.|+.|++||++.. +++..+.+ |...|.++.+ ++.++++|+.|+.|++||++.+
T Consensus 265 ~~~~l~s~~~dg~i~vwd~~~~---------------~~~~~~~~-~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~ 326 (435)
T 1p22_A 265 DDKYIVSASGDRTIKVWNTSTC---------------EFVRTLNG-HKRGIACLQY--RDRLVVSGSSDNTIRLWDIECG 326 (435)
T ss_dssp ETTEEEEEETTSEEEEEETTTC---------------CEEEEEEC-CSSCEEEEEE--ETTEEEEEETTSCEEEEETTTC
T ss_pred CCCEEEEEeCCCeEEEEECCcC---------------cEEEEEcC-CCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCC
Confidence 6789999999999999997543 44677777 8899999998 4679999999999999999977
Q ss_pred CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 84 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
. .......|...|.+++| + +.++++++.||.|++||++.+
T Consensus 327 ~----------~~~~~~~h~~~v~~~~~--~-~~~l~sg~~dg~i~vwd~~~~ 366 (435)
T 1p22_A 327 A----------CLRVLEGHEELVRCIRF--D-NKRIVSGAYDGKIKVWDLVAA 366 (435)
T ss_dssp C----------EEEEECCCSSCEEEEEC--C-SSEEEEEETTSCEEEEEHHHH
T ss_pred C----------EEEEEeCCcCcEEEEEe--c-CCEEEEEeCCCcEEEEECCCC
Confidence 6 44455689999999999 5 889999999999999998643
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.75 E-value=9.1e-17 Score=104.81 Aligned_cols=102 Identities=19% Similarity=0.359 Sum_probs=72.2
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
++.+++|+.|+.|++||+... +++..+.+ |...+.++.+ ++..+++++.|+.|++||++...
T Consensus 209 ~~~l~s~s~dg~i~~wd~~~~---------------~~~~~~~~-~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~ 270 (445)
T 2ovr_B 209 EKRVVSGSRDATLRVWDIETG---------------QCLHVLMG-HVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETET 270 (445)
T ss_dssp TTEEEEEETTSEEEEEESSSC---------------CEEEEEEC-CSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTE
T ss_pred CCEEEEEeCCCEEEEEECCCC---------------cEEEEEcC-CcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCc
Confidence 445666666666666664322 34556666 7788888887 57788888888888888887654
Q ss_pred CCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 85 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.......|...|.++.| + +.++++++.|+.|++||+++++
T Consensus 271 ----------~~~~~~~~~~~v~~~~~--~-~~~l~~~~~d~~i~i~d~~~~~ 310 (445)
T 2ovr_B 271 ----------CLHTLQGHTNRVYSLQF--D-GIHVVSGSLDTSIRVWDVETGN 310 (445)
T ss_dssp ----------EEEEECCCSSCEEEEEE--C-SSEEEEEETTSCEEEEETTTCC
T ss_pred ----------EeEEecCCCCceEEEEE--C-CCEEEEEeCCCeEEEEECCCCC
Confidence 33344567788888888 5 7788888888888888887654
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.73 E-value=6.7e-17 Score=101.80 Aligned_cols=99 Identities=8% Similarity=-0.051 Sum_probs=70.6
Q ss_pred CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec---CCCeEEEeeCCCcEEEEeccCCCCCCce
Q psy14817 13 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH---LTDLIATACGDDAIRIFKENPEAGDSDM 89 (138)
Q Consensus 13 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~~s~~~d~~i~i~~~~~~~~~~~~ 89 (138)
.|+.|++|++... .+.+..+.. |...+..++|++ ++..+++++.|++|+|||+..++
T Consensus 155 ~d~~V~~~~~s~d--------------G~~~~s~~~-~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk----- 214 (356)
T 2w18_A 155 SDQQVEVMTFAED--------------GGGKENQFL-MPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQ----- 214 (356)
T ss_dssp TTCEEEEEEECTT--------------SCEEEEEEE-CCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCC-----
T ss_pred CCCcEEEEEECCC--------------Cceeeeecc-CCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCc-----
Confidence 3788888886322 233455556 777888888888 66899999999999999999876
Q ss_pred eeeeeeeeeeccc---ccceeEEEEccCCCCEE------------EEEeCCCcEEEEEcCCCC
Q psy14817 90 VSFDLVHTEHRAH---NQDVNCVAWNPVVPGML------------ASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 90 ~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~l------------~~~~~d~~v~~wd~~~~~ 137 (138)
....+.+| ...+.+++|+|+ +.++ ++|+.|++|++||..+++
T Consensus 215 -----~l~tL~g~~~~v~~v~~vafSpd-G~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk 271 (356)
T 2w18_A 215 -----LLKKMHIDDSYQASVCHKAYSEM-GLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL 271 (356)
T ss_dssp -----EEEEEECCC---CCCEEEEEEET-TEEEEEEC------------CCEEEEEEETTTTE
T ss_pred -----EEEEEcCCCcceeeeEEEEECCC-CCEEEEeccCCCcceeeccCCCcEEEEEECCCCE
Confidence 33333333 346777899998 7765 568889999999988764
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.73 E-value=3.4e-16 Score=102.22 Aligned_cols=115 Identities=14% Similarity=0.147 Sum_probs=81.5
Q ss_pred CccC-CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQT-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~-~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|+ +++|++++.|++|++||++.. ..+....+ |...|.+++|+|++.+|++|+.|+.|++||
T Consensus 157 ~~p~~~~~las~s~Dg~v~iwD~~~~---------------~~~~~~~~-~~~~v~~v~wspdg~~lasgs~dg~v~iwd 220 (434)
T 2oit_A 157 WNPTVPSMVAVCLADGSIAVLQVTET---------------VKVCATLP-STVAVTSVCWSPKGKQLAVGKQNGTVVQYL 220 (434)
T ss_dssp ECSSCTTEEEEEETTSCEEEEEESSS---------------EEEEEEEC-GGGCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ECCCCCCEEEEEECCCeEEEEEcCCC---------------cceeeccC-CCCceeEEEEcCCCCEEEEEcCCCcEEEEc
Confidence 5787 789999999999999998543 22444455 788999999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEE-EeCCCc------EEEEEcCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLAS-CSDDGD------VKLWQIKLE 136 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~-~~~d~~------v~~wd~~~~ 136 (138)
++ +. ..............|...|.+++|+++ ..++++ .+.||. +++|+++..
T Consensus 221 ~~-~~---~~~~~~~~~~~~~~~~~~v~~v~w~~~-~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 221 PT-LQ---EKKVIPCPPFYESDHPVRVLDVLWIGT-YVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TT-CC---EEEEECCCTTCCTTSCEEEEEEEEEET-TEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred cC-Cc---ccccccCCcccCCCCceeEEEEEEecC-ceEEEEEccCCCccCCCCceEEEEeccC
Confidence 87 32 000000000000123448999999997 666644 444433 899998754
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.6e-16 Score=102.08 Aligned_cols=110 Identities=12% Similarity=0.093 Sum_probs=87.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeE-----EecCCCccCeEEEEEecCCCeEEEeeCCCcE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC-----TLSGHHGRTIYDISWCHLTDLIATACGDDAI 75 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i 75 (138)
|+|++.++++++.|+.|++||+.... .+. .+.+ |...+.+++|++++.++++++.|+.|
T Consensus 130 ~s~~~~~~~~~~~~~~i~~~d~~~g~---------------~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~s~~~d~~v 193 (433)
T 3bws_A 130 FIDNTRLAIPLLEDEGMDVLDINSGQ---------------TVRLSPPEKYKK-KLGFVETISIPEHNELWVSQMQANAV 193 (433)
T ss_dssp ESSSSEEEEEBTTSSSEEEEETTTCC---------------EEEECCCHHHHT-TCCEEEEEEEGGGTEEEEEEGGGTEE
T ss_pred EeCCCeEEEEeCCCCeEEEEECCCCe---------------EeeecCcccccc-cCCceeEEEEcCCCEEEEEECCCCEE
Confidence 46778889999999999999975432 122 3345 77899999999999999999999999
Q ss_pred EEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEE-EEEeCCCcEEEEEcCCCC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGML-ASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~d~~v~~wd~~~~~ 137 (138)
++||+.... .......|...+.+++|+|+ +..+ ++++.|+.|++||+++++
T Consensus 194 ~~~d~~~~~----------~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~i~~~d~~~~~ 245 (433)
T 3bws_A 194 HVFDLKTLA----------YKATVDLTGKWSKILLYDPI-RDLVYCSNWISEDISVIDRKTKL 245 (433)
T ss_dssp EEEETTTCC----------EEEEEECSSSSEEEEEEETT-TTEEEEEETTTTEEEEEETTTTE
T ss_pred EEEECCCce----------EEEEEcCCCCCeeEEEEcCC-CCEEEEEecCCCcEEEEECCCCc
Confidence 999998765 33333467789999999999 7766 455589999999998754
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.67 E-value=3e-15 Score=95.92 Aligned_cols=108 Identities=11% Similarity=0.156 Sum_probs=82.8
Q ss_pred CccCCCeE-EEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeE-EEeeCCCcEEEE
Q psy14817 1 MIQTGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l-~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~-~s~~~d~~i~i~ 78 (138)
|+|+++++ ++++.|+.|++||+... +.+..+.. ...+.+++|+|++.++ +++..++.|++|
T Consensus 39 ~s~dg~~l~~~~~~d~~i~v~d~~~~---------------~~~~~~~~--~~~v~~~~~spdg~~l~~~~~~~~~v~v~ 101 (391)
T 1l0q_A 39 ISPDGTKVYVANAHSNDVSIIDTATN---------------NVIATVPA--GSSPQGVAVSPDGKQVYVTNMASSTLSVI 101 (391)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEETTTT---------------EEEEEEEC--SSSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEECCCCCeEEEEECCCC---------------eEEEEEEC--CCCccceEECCCCCEEEEEECCCCEEEEE
Confidence 58899876 78889999999997432 44566654 3389999999999966 455567999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEE-EEEeCCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGML-ASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~d~~v~~wd~~~~~ 137 (138)
|+..+. ..... .+...+..++|+|+ ++.+ ++++.|+.|++||+++++
T Consensus 102 d~~~~~----------~~~~~-~~~~~~~~~~~s~d-g~~l~~~~~~~~~v~~~d~~~~~ 149 (391)
T 1l0q_A 102 DTTSNT----------VAGTV-KTGKSPLGLALSPD-GKKLYVTNNGDKTVSVINTVTKA 149 (391)
T ss_dssp ETTTTE----------EEEEE-ECSSSEEEEEECTT-SSEEEEEETTTTEEEEEETTTTE
T ss_pred ECCCCe----------EEEEE-eCCCCcceEEECCC-CCEEEEEeCCCCEEEEEECCCCc
Confidence 998764 22222 23457899999999 7766 788889999999998754
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.1e-15 Score=97.78 Aligned_cols=109 Identities=8% Similarity=0.064 Sum_probs=85.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeE-EEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~-~s~~~d~~i~i~~ 79 (138)
|+|+++++++++.|+.|++||+... +.+..+.. |...+.+++|+|++..+ ++++.++.|++||
T Consensus 177 ~~~~~~~~~s~~~d~~v~~~d~~~~---------------~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d 240 (433)
T 3bws_A 177 IPEHNELWVSQMQANAVHVFDLKTL---------------AYKATVDL-TGKWSKILLYDPIRDLVYCSNWISEDISVID 240 (433)
T ss_dssp EGGGTEEEEEEGGGTEEEEEETTTC---------------CEEEEEEC-SSSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EcCCCEEEEEECCCCEEEEEECCCc---------------eEEEEEcC-CCCCeeEEEEcCCCCEEEEEecCCCcEEEEE
Confidence 4688999999999999999997432 33556666 78899999999999966 4555799999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe--------CCCcEEEEEcCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS--------DDGDVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--------~d~~v~~wd~~~~~ 137 (138)
+..+. ..... .....+.+++|+|+ +..+++++ .|+.|++||+++++
T Consensus 241 ~~~~~----------~~~~~-~~~~~~~~~~~~~~-g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~ 294 (433)
T 3bws_A 241 RKTKL----------EIRKT-DKIGLPRGLLLSKD-GKELYIAQFSASNQESGGGRLGIYSMDKEK 294 (433)
T ss_dssp TTTTE----------EEEEC-CCCSEEEEEEECTT-SSEEEEEEEESCTTCSCCEEEEEEETTTTE
T ss_pred CCCCc----------EEEEe-cCCCCceEEEEcCC-CCEEEEEECCCCccccCCCeEEEEECCCCc
Confidence 98654 22222 23456899999999 88888887 58899999998754
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.66 E-value=1.2e-14 Score=94.42 Aligned_cols=108 Identities=15% Similarity=0.107 Sum_probs=82.1
Q ss_pred CccCCCeEEEeeCCC---cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEE-EeeCCCc--
Q psy14817 1 MIQTGSRLATCSDDA---TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA-TACGDDA-- 74 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~---~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~-s~~~d~~-- 74 (138)
|||+|++|++++.|+ .|++||+.... + ..+.. |...+.+++|+|++..++ +++.++.
T Consensus 186 ~Spdg~~la~~s~~~~~~~i~~~d~~tg~---------------~-~~l~~-~~~~~~~~~~spdg~~la~~~~~~g~~~ 248 (415)
T 2hqs_A 186 WSPDGSKLAYVTFESGRSALVIQTLANGA---------------V-RQVAS-FPRHNGAPAFSPDGSKLAFALSKTGSLN 248 (415)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEETTTCC---------------E-EEEEC-CSSCEEEEEECTTSSEEEEEECTTSSCE
T ss_pred EcCCCCEEEEEEecCCCcEEEEEECCCCc---------------E-EEeec-CCCcccCEEEcCCCCEEEEEEecCCCce
Confidence 689999999999885 99999975432 1 23444 677899999999999666 6666654
Q ss_pred EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-CC--cEEEEEcCCCC
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-DG--DVKLWQIKLEN 137 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~--~v~~wd~~~~~ 137 (138)
|++||+..+. .. ....+...+..++|+|+ ++.|++++. ++ .|.+||+.+++
T Consensus 249 i~~~d~~~~~----------~~-~l~~~~~~~~~~~~spd-g~~l~~~s~~~g~~~i~~~d~~~~~ 302 (415)
T 2hqs_A 249 LYVMDLASGQ----------IR-QVTDGRSNNTEPTWFPD-SQNLAFTSDQAGRPQVYKVNINGGA 302 (415)
T ss_dssp EEEEETTTCC----------EE-ECCCCSSCEEEEEECTT-SSEEEEEECTTSSCEEEEEETTSSC
T ss_pred EEEEECCCCC----------EE-eCcCCCCcccceEECCC-CCEEEEEECCCCCcEEEEEECCCCC
Confidence 9999988765 22 23467788999999999 888887775 45 57777887654
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.62 E-value=3.2e-14 Score=91.20 Aligned_cols=108 Identities=16% Similarity=0.120 Sum_probs=83.5
Q ss_pred CccCCCeE-EEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeE-EEeeCCCcEEEE
Q psy14817 1 MIQTGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l-~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~-~s~~~d~~i~i~ 78 (138)
|+|+++.+ ++++.|+.|++||+... +.+..+.. ...+.++.|+|++..+ ++++.++.|++|
T Consensus 123 ~s~dg~~l~~~~~~~~~v~~~d~~~~---------------~~~~~~~~--~~~~~~~~~~~dg~~l~~~~~~~~~v~~~ 185 (391)
T 1l0q_A 123 LSPDGKKLYVTNNGDKTVSVINTVTK---------------AVINTVSV--GRSPKGIAVTPDGTKVYVANFDSMSISVI 185 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTT---------------EEEEEEEC--CSSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEECCCC---------------cEEEEEec--CCCcceEEECCCCCEEEEEeCCCCEEEEE
Confidence 57899877 78889999999997432 34555554 3467999999999866 677788999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe---CCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS---DDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---~d~~v~~wd~~~~~ 137 (138)
|+.... ..... .+...+.+++|+|+ +..+++++ .++.|++||+++++
T Consensus 186 d~~~~~----------~~~~~-~~~~~~~~~~~~~~-g~~l~~~~~~~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 186 DTVTNS----------VIDTV-KVEAAPSGIAVNPE-GTKAYVTNVDKYFNTVSMIDTGTNK 235 (391)
T ss_dssp ETTTTE----------EEEEE-ECSSEEEEEEECTT-SSEEEEEEECSSCCEEEEEETTTTE
T ss_pred ECCCCe----------EEEEE-ecCCCccceEECCC-CCEEEEEecCcCCCcEEEEECCCCe
Confidence 998654 22222 34567899999999 88888777 68999999998653
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=4.3e-14 Score=94.69 Aligned_cols=108 Identities=7% Similarity=-0.070 Sum_probs=84.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++.++++++.|++|.+||.... +++.++.. +. .+..++++|+++++++++.|++|.+||+
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~---------------~~~~~i~~-g~-~~~~v~~spdg~~l~v~~~d~~V~v~D~ 207 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSK---------------KIVKVIDT-GY-AVHISRMSASGRYLLVIGRDARIDMIDL 207 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTC---------------CEEEEEEC-ST-TEEEEEECTTSCEEEEEETTSEEEEEET
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCc---------------eEEEEEec-Cc-ccceEEECCCCCEEEEECCCCeEEEEEC
Confidence 5788899999999999999996432 44667764 22 3889999999999999999999999999
Q ss_pred --cCCCCCCceeeeeeeeeeecccccceeEEEEcc----CCCCEEEEEeC-CCcEEEEEcCCCC
Q psy14817 81 --NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP----VVPGMLASCSD-DGDVKLWQIKLEN 137 (138)
Q Consensus 81 --~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~l~~~~~-d~~v~~wd~~~~~ 137 (138)
.... ..... .+...+..++|+| + ++++++++. +++|.+||..+.+
T Consensus 208 ~~~t~~----------~~~~i-~~g~~p~~va~sp~~~~d-g~~l~v~~~~~~~v~v~D~~t~~ 259 (543)
T 1nir_A 208 WAKEPT----------KVAEI-KIGIEARSVESSKFKGYE-DRYTIAGAYWPPQFAIMDGETLE 259 (543)
T ss_dssp TSSSCE----------EEEEE-ECCSEEEEEEECCSTTCT-TTEEEEEEEESSEEEEEETTTCC
T ss_pred cCCCCc----------EEEEE-ecCCCcceEEeCCCcCCC-CCEEEEEEccCCeEEEEeccccc
Confidence 4433 22222 2345679999999 9 998888884 8999999987654
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.56 E-value=3.3e-13 Score=87.71 Aligned_cols=104 Identities=13% Similarity=0.123 Sum_probs=79.3
Q ss_pred CCeEEEeeCC------CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCC---cE
Q psy14817 5 GSRLATCSDD------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD---AI 75 (138)
Q Consensus 5 ~~~l~t~s~d------~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~---~i 75 (138)
+..++.++.+ +.|++||+.... ...+.. |...+.+++|+|+++.++.++.++ .|
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~----------------~~~l~~-~~~~v~~~~~Spdg~~la~~s~~~~~~~i 205 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYN----------------QFVVHR-SPQPLMSPAWSPDGSKLAYVTFESGRSAL 205 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCS----------------CEEEEE-ESSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCC----------------CEEEeC-CCCcceeeEEcCCCCEEEEEEecCCCcEE
Confidence 6667776664 799999974321 344555 678999999999999999998875 89
Q ss_pred EEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEE-EEeCCCc--EEEEEcCCCC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA-SCSDDGD--VKLWQIKLEN 137 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~d~~--v~~wd~~~~~ 137 (138)
++||+..+. ... ...+...+.+++|+|+ ++.|+ +++.|+. |++||+++++
T Consensus 206 ~~~d~~tg~----------~~~-l~~~~~~~~~~~~spd-g~~la~~~~~~g~~~i~~~d~~~~~ 258 (415)
T 2hqs_A 206 VIQTLANGA----------VRQ-VASFPRHNGAPAFSPD-GSKLAFALSKTGSLNLYVMDLASGQ 258 (415)
T ss_dssp EEEETTTCC----------EEE-EECCSSCEEEEEECTT-SSEEEEEECTTSSCEEEEEETTTCC
T ss_pred EEEECCCCc----------EEE-eecCCCcccCEEEcCC-CCEEEEEEecCCCceEEEEECCCCC
Confidence 999998765 222 2356778999999999 88776 6666665 9999998764
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.1e-13 Score=83.88 Aligned_cols=112 Identities=11% Similarity=0.004 Sum_probs=82.3
Q ss_pred CccCCCeEE-EeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee-CCCcEEEE
Q psy14817 1 MIQTGSRLA-TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~-t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~-~d~~i~i~ 78 (138)
|+|++++|+ +++.|+.+++|++..... ....+.. +...+.++.|+|++..++.++ .++.+.+|
T Consensus 136 ~spdg~~l~~~~~~~~~~~l~~~~~~~~--------------~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~ 200 (297)
T 2ojh_A 136 WSPDGKSFTYCGIRDQVFDIYSMDIDSG--------------VETRLTH-GEGRNDGPDYSPDGRWIYFNSSRTGQMQIW 200 (297)
T ss_dssp ECTTSSEEEEEEEETTEEEEEEEETTTC--------------CEEECCC-SSSCEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred ECCCCCEEEEEECCCCceEEEEEECCCC--------------cceEccc-CCCccccceECCCCCEEEEEecCCCCccEE
Confidence 689999877 788999999999753221 1234444 677899999999999776655 58899999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC-----------CcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD-----------GDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----------~~v~~wd~~~~~ 137 (138)
++..... .......+...+..+.|+|+ +.+|++++.+ +.|.+||+.+++
T Consensus 201 ~~~~~~~---------~~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 260 (297)
T 2ojh_A 201 RVRVDGS---------SVERITDSAYGDWFPHPSPS-GDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGN 260 (297)
T ss_dssp EEETTSS---------CEEECCCCSEEEEEEEECTT-SSEEEEEEEETTCCSCCSSEEEEEEEEETTSCS
T ss_pred EECCCCC---------CcEEEecCCcccCCeEECCC-CCEEEEEEcCCCCCcccccCceEEEEEecCCCC
Confidence 8873320 12223356678889999999 9988887765 569999998764
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.6e-13 Score=94.41 Aligned_cols=107 Identities=12% Similarity=0.135 Sum_probs=81.1
Q ss_pred CccCCCeEEEeeC-CC-----cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCc-----------------------
Q psy14817 1 MIQTGSRLATCSD-DA-----TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG----------------------- 51 (138)
Q Consensus 1 ~s~~~~~l~t~s~-d~-----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 51 (138)
|||||++|++++. |+ .|++||+..... ...+.. +.
T Consensus 44 ~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~---------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (741)
T 2ecf_A 44 VAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQT---------------RLLVDS-KVVLPGTETLSDEEKARRERQRIAA 107 (741)
T ss_dssp ECTTSSEEEEEECCSSCTTEEEEEEEETTTCCE---------------EEEECG-GGTC--------------------C
T ss_pred EecCCCEEEEEeccCCCCcccEEEEEECCCCce---------------eEccch-hhcccccccccchhhhhhhhhhhcc
Confidence 6899999999998 88 999999754322 111111 11
Q ss_pred -cCeEEEEEecCCCeEEEeeCCCcEEEEeccCC---CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCc
Q psy14817 52 -RTIYDISWCHLTDLIATACGDDAIRIFKENPE---AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGD 127 (138)
Q Consensus 52 -~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 127 (138)
..+.+++|+|+|++++.++. +.|++||+..+ . ... ...+...+..++|+|+ ++.|++++ ++.
T Consensus 108 ~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~----------~~~-l~~~~~~~~~~~~SPD-G~~la~~~-~~~ 173 (741)
T 2ecf_A 108 MTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAA----------VRQ-LTHGEGFATDAKLSPK-GGFVSFIR-GRN 173 (741)
T ss_dssp CEESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTS----------CCB-CCCSSSCEEEEEECTT-SSEEEEEE-TTE
T ss_pred ccCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcce----------EEE-cccCCcccccccCCCC-CCEEEEEe-CCc
Confidence 23788999999999888876 89999999876 3 222 2356678999999999 99998887 468
Q ss_pred EEEEEcCCCC
Q psy14817 128 VKLWQIKLEN 137 (138)
Q Consensus 128 v~~wd~~~~~ 137 (138)
|++||+.+++
T Consensus 174 i~~~d~~~g~ 183 (741)
T 2ecf_A 174 LWVIDLASGR 183 (741)
T ss_dssp EEEEETTTTE
T ss_pred EEEEecCCCC
Confidence 9999987653
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.53 E-value=3.9e-14 Score=95.32 Aligned_cols=104 Identities=9% Similarity=0.003 Sum_probs=82.8
Q ss_pred CccCCCeEEEeeCC----CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCC--c
Q psy14817 1 MIQTGSRLATCSDD----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD--A 74 (138)
Q Consensus 1 ~s~~~~~l~t~s~d----~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~--~ 74 (138)
|||||++|++++.| +.|++||+.... ...+.. |...+..++|+|+|+.++++..++ .
T Consensus 157 ~spDG~~la~~~~~~~~~~~i~~~d~~~g~----------------~~~l~~-~~~~~~~~~~SpDG~~l~~~~~~~~~~ 219 (582)
T 3o4h_A 157 SDIRGDLIAGLGFFGGGRVSLFTSNLSSGG----------------LRVFDS-GEGSFSSASISPGMKVTAGLETAREAR 219 (582)
T ss_dssp EEEETTEEEEEEEEETTEEEEEEEETTTCC----------------CEEECC-SSCEEEEEEECTTSCEEEEEECSSCEE
T ss_pred ECCCCCEEEEEEEcCCCCeEEEEEcCCCCC----------------ceEeec-CCCccccceECCCCCEEEEccCCCeeE
Confidence 58999999988877 789999975432 234555 677889999999999999888888 8
Q ss_pred EEEEeccCCCCCCceeeeeeeeeeecccccceeEEE--------EccCCCCEEEEEeCCCcEEEEEc
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVA--------WNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
|++||+..+. .. ....+...+..+. |+|+ +.++++++.|+.+++|++
T Consensus 220 i~~~d~~~~~----------~~-~~~~~~~~~~~~~~~~~~~~~~spd-g~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 220 LVTVDPRDGS----------VE-DLELPSKDFSSYRPTAITWLGYLPD-GRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEECTTTCC----------EE-ECCCSCSHHHHHCCSEEEEEEECTT-SCEEEEEEETTEEEEEET
T ss_pred EEEEcCCCCc----------EE-EccCCCcChhhhhhccccceeEcCC-CcEEEEEEcCCcEEEEEE
Confidence 9999998765 22 3345555666666 9999 788999999999999997
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.50 E-value=4.1e-13 Score=84.36 Aligned_cols=113 Identities=10% Similarity=0.034 Sum_probs=78.8
Q ss_pred CccCCCeEEEeeCC-CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee-CCCcEEEE
Q psy14817 1 MIQTGSRLATCSDD-ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d-~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~-~d~~i~i~ 78 (138)
|+|+|++|++++.+ +.|.+|++... ....+.+..+.. +. .+..++|+|++.+++.++ .++.|.+|
T Consensus 45 ~spdg~~l~~~~~~~~~v~~~~~~~~-----------~~~~~~~~~~~~-~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~ 111 (343)
T 1ri6_A 45 VSPDKRYLYVGVRPEFRVLAYRIAPD-----------DGALTFAAESAL-PG-SLTHISTDHQGQFVFVGSYNAGNVSVT 111 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTT-----------TCCEEEEEEEEC-SS-CCSEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEeecCCCeEEEEEecCC-----------CCceeecccccc-CC-CCcEEEEcCCCCEEEEEecCCCeEEEE
Confidence 58999988888876 99999998521 112234445544 33 788999999999776555 48889999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe-CCCcEEEEEcCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS-DDGDVKLWQIKL 135 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~v~~wd~~~ 135 (138)
++..+. . .. ..... .....+..++|+|+ ++.+++++ .++.|.+||+..
T Consensus 112 d~~~~~---~---~~-~~~~~-~~~~~~~~~~~s~d-g~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 112 RLEDGL---P---VG-VVDVV-EGLDGCHSANISPD-NRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp EEETTE---E---EE-EEEEE-CCCTTBCCCEECTT-SSEEEEEEGGGTEEEEEEECT
T ss_pred ECCCCc---c---cc-ccccc-cCCCCceEEEECCC-CCEEEEecCCCCEEEEEEecC
Confidence 995211 0 00 11111 23346889999999 88777776 899999999976
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.50 E-value=1.5e-13 Score=94.32 Aligned_cols=110 Identities=9% Similarity=0.060 Sum_probs=81.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCcc---CeEEEEEecCCCeEEEeeCC-----
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR---TIYDISWCHLTDLIATACGD----- 72 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~v~~~~~~~~~~s~~~d----- 72 (138)
|||+|+++++ +.|+.|++||...... ...+.. |.. .+.+++|+|+|++++.++.+
T Consensus 24 ~spdg~~~~~-~~dg~i~~~d~~~g~~---------------~~~~~~-~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~ 86 (723)
T 1xfd_A 24 WISDTEFIYR-EQKGTVRLWNVETNTS---------------TVLIEG-KKIESLRAIRYEISPDREYALFSYNVEPIYQ 86 (723)
T ss_dssp BSSSSCBCCC-CSSSCEEEBCGGGCCC---------------EEEECT-TTTTTTTCSEEEECTTSSEEEEEESCCCCSS
T ss_pred EcCCCcEEEE-eCCCCEEEEECCCCcE---------------EEEecc-ccccccccceEEECCCCCEEEEEecCcccee
Confidence 7899998876 7899999999865432 333443 443 48999999999999888764
Q ss_pred ----CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 73 ----DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 73 ----~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.+.+||+..+.. ........+...+..++|+|+ ++.|++++. +.|++||+.+++
T Consensus 87 ~~~~~~i~~~d~~~~~~--------~~l~~~~~~~~~~~~~~~SPd-G~~la~~~~-~~i~~~~~~~g~ 145 (723)
T 1xfd_A 87 HSYTGYYVLSKIPHGDP--------QSLDPPEVSNAKLQYAGWGPK-GQQLIFIFE-NNIYYCAHVGKQ 145 (723)
T ss_dssp SCCCSEEEEEESSSCCC--------EECCCTTCCSCCCSBCCBCSS-TTCEEEEET-TEEEEESSSSSC
T ss_pred ecceeeEEEEECCCCce--------EeccCCccccccccccEECCC-CCEEEEEEC-CeEEEEECCCCc
Confidence 6788999987650 011111234455889999999 999988886 789999987754
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.49 E-value=3.5e-13 Score=92.52 Aligned_cols=99 Identities=7% Similarity=-0.052 Sum_probs=69.6
Q ss_pred CccCCCeEEEeeCC---------CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC
Q psy14817 1 MIQTGSRLATCSDD---------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 71 (138)
Q Consensus 1 ~s~~~~~l~t~s~d---------~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~ 71 (138)
|||||++|++++.+ +.+.+||+..... +.+..... |...+..++|+|+|+.++.++.
T Consensus 68 ~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-------------~~l~~~~~-~~~~~~~~~~SPdG~~la~~~~ 133 (723)
T 1xfd_A 68 ISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-------------QSLDPPEV-SNAKLQYAGWGPKGQQLIFIFE 133 (723)
T ss_dssp ECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-------------EECCCTTC-CSCCCSBCCBCSSTTCEEEEET
T ss_pred ECCCCCEEEEEecCccceeecceeeEEEEECCCCce-------------EeccCCcc-ccccccccEECCCCCEEEEEEC
Confidence 68999999999875 7788999754322 12222223 4455888999999999888876
Q ss_pred CCcEEEEeccCCCCCCceeeeeeeeeeeccccc------------------ceeEEEEccCCCCEEEEEeCC
Q psy14817 72 DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ------------------DVNCVAWNPVVPGMLASCSDD 125 (138)
Q Consensus 72 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~~l~~~~~d 125 (138)
+.|++|++..+. .......+.. .+..+.|+|+ ++.|++++.|
T Consensus 134 -~~i~~~~~~~g~----------~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpD-g~~la~~~~~ 193 (723)
T 1xfd_A 134 -NNIYYCAHVGKQ----------AIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPD-GTRLAYAAIN 193 (723)
T ss_dssp -TEEEEESSSSSC----------CEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTT-SSEEEEEEEE
T ss_pred -CeEEEEECCCCc----------eEEEecCCCCCceECcccceeEEEEeccCcceEEECCC-CCEEEEEEEC
Confidence 689999998765 2222222222 2378999999 9999888755
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.48 E-value=1e-12 Score=90.53 Aligned_cols=99 Identities=11% Similarity=0.073 Sum_probs=71.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|||||++|++++. +.|.+||+.....+ ....+.. +...+..++|+|+|++++.++. +.|++|++
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~-------------~~~~l~~-~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~ 179 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKA-------------AVRQLTH-GEGFATDAKLSPKGGFVSFIRG-RNLWVIDL 179 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTT-------------SCCBCCC-SSSCEEEEEECTTSSEEEEEET-TEEEEEET
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcc-------------eEEEccc-CCcccccccCCCCCCEEEEEeC-CcEEEEec
Confidence 6899999999987 99999998654100 0223444 5678999999999999888874 58999999
Q ss_pred cCCCCCCceeeeeeeeeeeccccc----------------ceeEEEEccCCCCEEEEEeCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQ----------------DVNCVAWNPVVPGMLASCSDDG 126 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~----------------~v~~~~~~~~~~~~l~~~~~d~ 126 (138)
..+. .......+.. .+..+.|+|+ ++.|++++.|+
T Consensus 180 ~~g~----------~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpD-g~~l~~~~~d~ 230 (741)
T 2ecf_A 180 ASGR----------QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPD-DSAIAYARIDE 230 (741)
T ss_dssp TTTE----------EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTT-SSCEEEEEEEC
T ss_pred CCCC----------EEEeccCCccceeccccceeeeeccccccceEECCC-CCEEEEEEEcC
Confidence 8654 2222212221 2578999999 99998887765
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.3e-12 Score=80.37 Aligned_cols=107 Identities=13% Similarity=0.046 Sum_probs=73.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccC-CCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee--CCCcEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYK-PGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC--GDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~d~~i~i 77 (138)
|+|+|++|++++ ++.|++||+.. ... ......++...+.+++|+|++.+++.++ .++...+
T Consensus 49 ~spdg~~l~~~~-~~~i~~~d~~~~~~~---------------~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l 112 (297)
T 2ojh_A 49 WSPDGKYLLLNS-EGLLYRLSLAGDPSP---------------EKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAI 112 (297)
T ss_dssp ECTTSSEEEEEE-TTEEEEEESSSCCSC---------------EECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEE
T ss_pred ECCCCCEEEEEc-CCeEEEEeCCCCCCc---------------eEeccccccccccceEECCCCCEEEEEEeCCCCcceE
Confidence 689999999987 78999999865 322 2223332346788999999999998888 4456666
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEE-EEeCCCcEEEEEcC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA-SCSDDGDVKLWQIK 134 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~d~~v~~wd~~ 134 (138)
|.+...... ... . .....+..++|+|+ ++.++ +++.|+.+++|+++
T Consensus 113 ~~~~~~~~~--------~~~-~-~~~~~~~~~~~spd-g~~l~~~~~~~~~~~l~~~~ 159 (297)
T 2ojh_A 113 YLLPSTGGT--------PRL-M-TKNLPSYWHGWSPD-GKSFTYCGIRDQVFDIYSMD 159 (297)
T ss_dssp EEEETTCCC--------CEE-C-CSSSSEEEEEECTT-SSEEEEEEEETTEEEEEEEE
T ss_pred EEEECCCCc--------eEE-e-ecCCCccceEECCC-CCEEEEEECCCCceEEEEEE
Confidence 665432200 111 1 22234888999999 77665 78889999999864
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=5.7e-12 Score=84.55 Aligned_cols=112 Identities=13% Similarity=0.096 Sum_probs=83.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec----CCCeEEEee-CCCcE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH----LTDLIATAC-GDDAI 75 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~----~~~~~~s~~-~d~~i 75 (138)
|+|+|+++++++.|++|++||+.. ...+++..+.. ...+..++|+| +++++++++ .+++|
T Consensus 186 ~spdg~~l~v~~~d~~V~v~D~~~-------------~t~~~~~~i~~--g~~p~~va~sp~~~~dg~~l~v~~~~~~~v 250 (543)
T 1nir_A 186 MSASGRYLLVIGRDARIDMIDLWA-------------KEPTKVAEIKI--GIEARSVESSKFKGYEDRYTIAGAYWPPQF 250 (543)
T ss_dssp ECTTSCEEEEEETTSEEEEEETTS-------------SSCEEEEEEEC--CSEEEEEEECCSTTCTTTEEEEEEEESSEE
T ss_pred ECCCCCEEEEECCCCeEEEEECcC-------------CCCcEEEEEec--CCCcceEEeCCCcCCCCCEEEEEEccCCeE
Confidence 689999999999999999999721 12245666654 45678999999 999888887 48999
Q ss_pred EEEeccCCCCCCceeeeeeeeeeec---------cc-ccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEHR---------AH-NQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~---------~~-~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.+||....+ ....... .| ...+..+.++|+...++++...++.|.+||+.+.
T Consensus 251 ~v~D~~t~~---------~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~ 312 (543)
T 1nir_A 251 AIMDGETLE---------PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDI 312 (543)
T ss_dssp EEEETTTCC---------EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTS
T ss_pred EEEeccccc---------cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCC
Confidence 999987655 1111110 02 2378899999984567778888999999998764
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=2e-12 Score=92.22 Aligned_cols=108 Identities=6% Similarity=-0.028 Sum_probs=85.3
Q ss_pred CccCCCeEEEeeCCCcEE-EeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVK-IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~-iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+ +|+.|+.++.+..+. +|++.... ...+.. |...+..++|+|++++++.++.++.|++||
T Consensus 345 ~s-dg~~l~~~s~~~~l~~~~d~~~~~----------------~~~l~~-~~~~~~~~~~SpDG~~la~~~~~~~v~~~d 406 (1045)
T 1k32_A 345 GD-TKVAFIHGTREGDFLGIYDYRTGK----------------AEKFEE-NLGNVFAMGVDRNGKFAVVANDRFEIMTVD 406 (1045)
T ss_dssp SS-SEEEEEEEETTEEEEEEEETTTCC----------------EEECCC-CCCSEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred Ec-CCCeEEEEECCCceEEEEECCCCC----------------ceEecC-CccceeeeEECCCCCEEEEECCCCeEEEEE
Confidence 56 888899998887787 88864321 233444 678899999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCC----------cEEEEEcCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG----------DVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~----------~v~~wd~~~~~ 137 (138)
+..+. .......|...+..++|+|+ +++|++++.++ .|++||+.+++
T Consensus 407 ~~tg~----------~~~~~~~~~~~v~~~~~SpD-G~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 407 LETGK----------PTVIERSREAMITDFTISDN-SRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp TTTCC----------EEEEEECSSSCCCCEEECTT-SCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred CCCCc----------eEEeccCCCCCccceEECCC-CCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 98766 33344467788999999999 99888887654 89999987653
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.43 E-value=2.9e-11 Score=75.95 Aligned_cols=119 Identities=5% Similarity=0.045 Sum_probs=76.3
Q ss_pred CccCCCeEEEee-CCCcEEEeeccCCCCCCCccCCCCCCceEEeE--EecCCCccCeEEEEEecCCCeEEE-eeCCCcEE
Q psy14817 1 MIQTGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC--TLSGHHGRTIYDISWCHLTDLIAT-ACGDDAIR 76 (138)
Q Consensus 1 ~s~~~~~l~t~s-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~v~~~~~~~~~~s-~~~d~~i~ 76 (138)
|+|+|+++++++ .++.|.+|++..... ...+. .+.......+.++.|+|++.+++. +..++.+.
T Consensus 136 ~s~dg~~l~~~~~~~~~v~~~d~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~ 203 (343)
T 1ri6_A 136 ISPDNRTLWVPALKQDRICLFTVSDDGH------------LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVD 203 (343)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEEECTTSC------------EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred ECCCCCEEEEecCCCCEEEEEEecCCCc------------eeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEE
Confidence 589999888777 899999999854221 11121 222213457889999999996654 44788999
Q ss_pred EEeccCCCCCCceeeeeeeeeeecc--cccceeEEEEccCCCCEEE-EEeCCCcEEEEEcC
Q psy14817 77 IFKENPEAGDSDMVSFDLVHTEHRA--HNQDVNCVAWNPVVPGMLA-SCSDDGDVKLWQIK 134 (138)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~-~~~~d~~v~~wd~~ 134 (138)
+|++....+... ........... ....+..++|+|+ +++++ +...++.|.+||+.
T Consensus 204 ~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~i~~s~d-g~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 204 VWELKDPHGNIE--CVQTLDMMPENFSDTRWAADIHITPD-GRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp EEESSCTTSCCE--EEEEEECSCTTCCSCCCEEEEEECTT-SSEEEEEETTTTEEEEEEEC
T ss_pred EEEecCCCCcEE--EEeeccccCccccccCCccceEECCC-CCEEEEEecCCCEEEEEEEc
Confidence 999964321111 01111111111 1345678999999 77666 55579999999997
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.8e-11 Score=77.41 Aligned_cols=114 Identities=7% Similarity=0.095 Sum_probs=74.4
Q ss_pred CccCCCeEE-EeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCC-----ccCeEEEEEecCCCeE-EEeeCCC
Q psy14817 1 MIQTGSRLA-TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-----GRTIYDISWCHLTDLI-ATACGDD 73 (138)
Q Consensus 1 ~s~~~~~l~-t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~v~~~~~~~~~-~s~~~d~ 73 (138)
|+|+|++++ ++..++.|.+|++..... ....+..+.... ...+..++|+|+|+++ ++...++
T Consensus 194 ~spdg~~l~v~~~~~~~v~v~~~~~~~g-----------~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~ 262 (347)
T 3hfq_A 194 FSPDGQYAFLAGELSSQIASLKYDTQTG-----------AFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYN 262 (347)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEETTTT-----------EEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTT
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCC-----------ceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCC
Confidence 689999555 466789999999754211 112222322201 1358889999999966 5666789
Q ss_pred cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-CCcEEEEEc
Q psy14817 74 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-DGDVKLWQI 133 (138)
Q Consensus 74 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~v~~wd~ 133 (138)
.|.+|++.... . .. .......+...+..++|+|+ +++|++++. ++.+.+|++
T Consensus 263 ~v~v~~~~~~g---~---~~-~~~~~~~~~~~~~~~~~spd-g~~l~v~~~~~~~v~v~~~ 315 (347)
T 3hfq_A 263 TLAVFAVTADG---H---LT-LIQQISTEGDFPRDFDLDPT-EAFVVVVNQNTDNATLYAR 315 (347)
T ss_dssp EEEEEEECGGG---C---EE-EEEEEECSSSCCCEEEECTT-SSEEEEEETTTTEEEEEEE
T ss_pred EEEEEEECCCC---c---EE-EeEEEecCCCCcCeEEECCC-CCEEEEEEcCCCcEEEEEE
Confidence 99999987321 0 01 11112234556889999999 888877775 489999954
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=3.8e-12 Score=87.32 Aligned_cols=122 Identities=11% Similarity=0.076 Sum_probs=78.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccC-----CCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee-----
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYK-----PGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC----- 70 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~----- 70 (138)
|||+|++|+.+ .|+.|++|++.. ........... .....-...... +...+.++.|+|+|++|+.++
T Consensus 128 ~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~-~~~~~g~~~~~e-e~~~~~~~~~SpDg~~la~~~~d~~~ 204 (706)
T 2z3z_A 128 FSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGT-ETLVYGQAVHQR-EFGIEKGTFWSPKGSCLAFYRMDQSM 204 (706)
T ss_dssp ECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCB-TTEEESSCCGGG-CTTCCCSEEECTTSSEEEEEEEECTT
T ss_pred CCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCC-CCeEcccchhhh-hcCCCceEEECCCCCEEEEEEECCCC
Confidence 68999999985 679999999865 22210000000 000000000000 122358899999999888887
Q ss_pred ----------------------------CCCcEEEEeccCCCCCCceeeeeeeeeee--cccccceeEEEEccCCCCEEE
Q psy14817 71 ----------------------------GDDAIRIFKENPEAGDSDMVSFDLVHTEH--RAHNQDVNCVAWNPVVPGMLA 120 (138)
Q Consensus 71 ----------------------------~d~~i~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~ 120 (138)
.+..|.+||+..+. ..... ..+...+..++|+|+ ++.|+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~----------~~~~~~~~~~~~~~~~~~~spd-g~~l~ 273 (706)
T 2z3z_A 205 VKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGK----------TVYLQTGEPKEKFLTNLSWSPD-ENILY 273 (706)
T ss_dssp SCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTE----------EEECCCCSCTTCEEEEEEECTT-SSEEE
T ss_pred CceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCc----------eEeeccCCCCceeEeeEEEECC-CCEEE
Confidence 34579999987654 11111 245677899999999 99888
Q ss_pred EEeCCC-----cEEEEEcCCC
Q psy14817 121 SCSDDG-----DVKLWQIKLE 136 (138)
Q Consensus 121 ~~~~d~-----~v~~wd~~~~ 136 (138)
+++.++ .|.+||+.++
T Consensus 274 ~~~~~~~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 274 VAEVNRAQNECKVNAYDAETG 294 (706)
T ss_dssp EEEECTTSCEEEEEEEETTTC
T ss_pred EEEeCCCCCeeEEEEEECCCC
Confidence 887775 8999999876
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=3e-12 Score=91.39 Aligned_cols=106 Identities=12% Similarity=-0.010 Sum_probs=82.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCC-------
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD------- 73 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~------- 73 (138)
|||+|++|++++.++.|++||+... +....... |...+..++|+|+|++++.++.++
T Consensus 386 ~SpDG~~la~~~~~~~v~~~d~~tg---------------~~~~~~~~-~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~ 449 (1045)
T 1k32_A 386 VDRNGKFAVVANDRFEIMTVDLETG---------------KPTVIERS-REAMITDFTISDNSRFIAYGFPLKHGETDGY 449 (1045)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTC---------------CEEEEEEC-SSSCCCCEEECTTSCEEEEEEEECSSTTCSC
T ss_pred ECCCCCEEEEECCCCeEEEEECCCC---------------ceEEeccC-CCCCccceEECCCCCeEEEEecCccccccCC
Confidence 6899999999999999999997543 22333335 778889999999999888776543
Q ss_pred ---cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 74 ---AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 74 ---~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
.|++||+..+. . .....+...+..+.|+|+ ++.|++++.++...+|+..
T Consensus 450 ~~~~i~l~d~~~g~----------~-~~l~~~~~~~~~~~~spd-G~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 450 VMQAIHVYDMEGRK----------I-FAATTENSHDYAPAFDAD-SKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp CEEEEEEEETTTTE----------E-EECSCSSSBEEEEEECTT-SCEEEEEESCCCCCEECSS
T ss_pred CCCeEEEEECCCCc----------E-EEeeCCCcccCCceEcCC-CCEEEEEecccCCcCcchh
Confidence 89999998643 2 223356677888999999 9999999988887777654
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.41 E-value=6.9e-12 Score=79.02 Aligned_cols=111 Identities=3% Similarity=-0.137 Sum_probs=79.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeE-EEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~-~s~~~d~~i~i~~ 79 (138)
++++++++++++.++.|.+||.... +.+..+.......+..++|+|++..+ ++...++.|.+||
T Consensus 7 ~~~~~~~~v~~~~~~~v~~~d~~~~---------------~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d 71 (349)
T 1jmx_B 7 LKAGHEYMIVTNYPNNLHVVDVASD---------------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGID 71 (349)
T ss_dssp CCTTCEEEEEEETTTEEEEEETTTT---------------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ccCCCEEEEEeCCCCeEEEEECCCC---------------cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEe
Confidence 4678889999999999999996432 34555544122257789999999854 5556788999999
Q ss_pred ccCCCCCCceeeeeeeeeeeccc-----ccceeEEEEccCCCCEEEEEeCC------------CcEEEEEcCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAH-----NQDVNCVAWNPVVPGMLASCSDD------------GDVKLWQIKLE 136 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~l~~~~~d------------~~v~~wd~~~~ 136 (138)
+..+. ........+ ...+..++|+|+ ++++++++.+ +.|.+||+.++
T Consensus 72 ~~t~~---------~~~~~~~~~~~~~~~~~~~~~~~spd-g~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 135 (349)
T 1jmx_B 72 LDTCK---------NTFHANLSSVPGEVGRSMYSFAISPD-GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADG 135 (349)
T ss_dssp TTTTE---------EEEEEESCCSTTEEEECSSCEEECTT-SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGG
T ss_pred CCCCc---------EEEEEEcccccccccccccceEECCC-CCEEEEEcccccccccccccCCCeEEEEECCCc
Confidence 98654 111111111 234788999999 9888888765 89999998763
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.5e-11 Score=77.62 Aligned_cols=111 Identities=5% Similarity=0.028 Sum_probs=80.3
Q ss_pred CccCCCeEEEee--CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCS--DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s--~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~ 78 (138)
|+|+|++++.++ .++.|.+||.... +.+..+.. +...+.++.|+|++..++.++.++.|.+|
T Consensus 148 ~s~dg~~l~~~~~~~~~~i~~~d~~~~---------------~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~i~~~ 211 (353)
T 3vgz_A 148 ADDATNTVYISGIGKESVIWVVDGGNI---------------KLKTAIQN-TGKMSTGLALDSEGKRLYTTNADGELITI 211 (353)
T ss_dssp EETTTTEEEEEEESSSCEEEEEETTTT---------------EEEEEECC-CCTTCCCCEEETTTTEEEEECTTSEEEEE
T ss_pred ECCCCCEEEEEecCCCceEEEEcCCCC---------------ceEEEecC-CCCccceEEECCCCCEEEEEcCCCeEEEE
Confidence 478888777665 5889999996432 44555553 44567889999999998888889999999
Q ss_pred eccCCCCCCceeeeeeeeeee---cccccceeEEEEccCCCCEEEEEe-CCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEH---RAHNQDVNCVAWNPVVPGMLASCS-DDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~~~~-~d~~v~~wd~~~~~ 137 (138)
|+..+. ...... ..+...+..++|+|+ ++.++.++ .++.|.+||+.+++
T Consensus 212 d~~~~~---------~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~~v~~~d~~~~~ 264 (353)
T 3vgz_A 212 DTADNK---------ILSRKKLLDDGKEHFFINISLDTA-RQRAFITDSKAAEVLVVDTRNGN 264 (353)
T ss_dssp ETTTTE---------EEEEEECCCSSSCCCEEEEEEETT-TTEEEEEESSSSEEEEEETTTCC
T ss_pred ECCCCe---------EEEEEEcCCCCCCcccceEEECCC-CCEEEEEeCCCCEEEEEECCCCc
Confidence 988654 111111 124556788999999 77665555 45999999998764
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.1e-12 Score=90.21 Aligned_cols=107 Identities=12% Similarity=0.128 Sum_probs=76.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCcc---CeEEEEEecCCCeEEEeeC------
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR---TIYDISWCHLTDLIATACG------ 71 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~v~~~~~~~~~~s~~~------ 71 (138)
|+|+|++++++ .|+.|++||+.... +...+.. +.. .+.+++|+|+|++++.++.
T Consensus 23 ~s~dg~~~~~~-~d~~i~~~~~~~g~---------------~~~~~~~-~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~ 85 (719)
T 1z68_A 23 WISGQEYLHQS-ADNNIVLYNIETGQ---------------SYTILSN-RTMKSVNASNYGLSPDRQFVYLESDYSKLWR 85 (719)
T ss_dssp ESSSSEEEEEC-TTSCEEEEESSSCC---------------EEEEECH-HHHHTTTCSEEEECTTSSEEEEEEEEEECSS
T ss_pred ECCCCeEEEEc-CCCCEEEEEcCCCc---------------EEEEEcc-ccccccceeeEEECCCCCeEEEEecCceeEE
Confidence 68899766655 69999999975432 2333332 322 4889999999998888766
Q ss_pred ---CCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 72 ---DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 72 ---d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
++.|++||+..+. .... ......+..++|+|+ ++.|+++. |+.|++|++.+++
T Consensus 86 ~s~~~~i~~~d~~~g~----------~~~~-~~l~~~~~~~~~SPD-G~~la~~~-~~~i~~~~~~~g~ 141 (719)
T 1z68_A 86 YSYTATYYIYDLSNGE----------FVRG-NELPRPIQYLCWSPV-GSKLAYVY-QNNIYLKQRPGDP 141 (719)
T ss_dssp SCEEEEEEEEETTTTE----------ECCS-SCCCSSBCCEEECSS-TTCEEEEE-TTEEEEESSTTSC
T ss_pred eecceEEEEEECCCCc----------cccc-eecCcccccceECCC-CCEEEEEE-CCeEEEEeCCCCC
Confidence 6899999998765 2000 011246888999999 99998886 7899999987654
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.40 E-value=4.5e-12 Score=80.17 Aligned_cols=116 Identities=9% Similarity=0.119 Sum_probs=75.6
Q ss_pred CccCCCeEEEeeC--CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee-CCCcEEE
Q psy14817 1 MIQTGSRLATCSD--DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s~--d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~-~d~~i~i 77 (138)
|+|+|++++++.. ++.|.+|++... ..+.+..+.. +...+..++|+|+++++++++ .++.+.+
T Consensus 47 ~spdg~l~~~~~~~~~~~v~~~~~~~g-------------~~~~~~~~~~-~~~~p~~~a~spdg~~l~~~~~~~~~v~v 112 (347)
T 3hfq_A 47 LSAKDCLYSVDKEDDEGGIAAWQIDGQ-------------TAHKLNTVVA-PGTPPAYVAVDEARQLVYSANYHKGTAEV 112 (347)
T ss_dssp ECTTCEEEEEEEETTEEEEEEEEEETT-------------EEEEEEEEEE-ESCCCSEEEEETTTTEEEEEETTTTEEEE
T ss_pred EccCCeEEEEEecCCCceEEEEEecCC-------------cEEEeeeeec-CCCCCEEEEECCCCCEEEEEeCCCCEEEE
Confidence 5889994444432 689999998322 1233444444 466788999999999777777 6789999
Q ss_pred EeccCCCCCCceeeeeeeeeee-----cccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEH-----RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
|++.... ............ ......+..++|+|+ ++++++...++.|.+|++.
T Consensus 113 ~~~~~~g---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spd-g~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 113 MKIAADG---ALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPD-NRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEECTTS---CEEEEEEEECCCCCSSTTCSSCCEEEEEECTT-SCEEEEETTTTEEEEEEEC
T ss_pred EEeCCCC---CeeecceeecCCCCCCccccCCCceEEEECCC-CcEEEEeCCCCEEEEEEEC
Confidence 9996422 111110000000 012235888999999 7766666678899999987
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1.9e-11 Score=77.20 Aligned_cols=111 Identities=9% Similarity=0.006 Sum_probs=78.8
Q ss_pred CccCCC-eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCcc--------CeEEEEEecCCCeEEEee-
Q psy14817 1 MIQTGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR--------TIYDISWCHLTDLIATAC- 70 (138)
Q Consensus 1 ~s~~~~-~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~v~~v~~~~~~~~~~s~~- 70 (138)
|+|+|+ .+++...++.|.+||..... .+..+...... .+.++.|+|++..++.+.
T Consensus 96 ~s~dg~~l~v~~~~~~~v~~~d~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 160 (353)
T 3vgz_A 96 INNTTQTLWFGNTVNSAVTAIDAKTGE---------------VKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI 160 (353)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTCC---------------EEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEE
T ss_pred ECCCCCEEEEEecCCCEEEEEeCCCCe---------------eEEEEecCCCccccccCCCCCceEEECCCCCEEEEEec
Confidence 478888 45566668999999975432 23333331111 268899999999666654
Q ss_pred -CCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 71 -GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 71 -~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.++.|.+||..... .......+...+..+.|+|+ ++.+++++.++.|.+||+.+++
T Consensus 161 ~~~~~i~~~d~~~~~----------~~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~i~~~d~~~~~ 217 (353)
T 3vgz_A 161 GKESVIWVVDGGNIK----------LKTAIQNTGKMSTGLALDSE-GKRLYTTNADGELITIDTADNK 217 (353)
T ss_dssp SSSCEEEEEETTTTE----------EEEEECCCCTTCCCCEEETT-TTEEEEECTTSEEEEEETTTTE
T ss_pred CCCceEEEEcCCCCc----------eEEEecCCCCccceEEECCC-CCEEEEEcCCCeEEEEECCCCe
Confidence 47889999998664 22222224456788999999 9999999999999999987764
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.38 E-value=2.4e-11 Score=77.30 Aligned_cols=113 Identities=13% Similarity=0.099 Sum_probs=74.5
Q ss_pred CccCCCeEEEee-CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC--CCccCeEEEEEecCCCeEEEeeC--CCcE
Q psy14817 1 MIQTGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG--HHGRTIYDISWCHLTDLIATACG--DDAI 75 (138)
Q Consensus 1 ~s~~~~~l~t~s-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~v~~~~~~~~~~s~~~--d~~i 75 (138)
|+|+|+++++++ .++.|.+|++.... ...+..+.. .+......++|+|++++++.+.. ++.|
T Consensus 218 ~spdg~~l~v~~~~~~~v~v~~~~~g~-------------~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i 284 (361)
T 3scy_A 218 FNSDGKFAYLINEIGGTVIAFRYADGM-------------LDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGV 284 (361)
T ss_dssp ECTTSSEEEEEETTTCEEEEEEEETTE-------------EEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEE
T ss_pred EcCCCCEEEEEcCCCCeEEEEEecCCc-------------eEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEE
Confidence 689999877666 68999999985221 122222221 13345789999999997766555 4889
Q ss_pred EEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe-CCCcEEEEEcC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS-DDGDVKLWQIK 134 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~v~~wd~~ 134 (138)
.+|++....+. . ....... . ...+..++|+|+ +++|++++ .++.|.+|.+.
T Consensus 285 ~v~~~~~~~g~---~--~~~~~~~-~-g~~~~~~~~spd-g~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 285 AIFKVDETNGT---L--TKVGYQL-T-GIHPRNFIITPN-GKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp EEEEECTTTCC---E--EEEEEEE-C-SSCCCEEEECTT-SCEEEEEETTTTEEEEEEEC
T ss_pred EEEEEcCCCCc---E--EEeeEec-C-CCCCceEEECCC-CCEEEEEECCCCCEEEEEEE
Confidence 99999732210 0 0111111 2 456789999999 88887777 67899996553
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.37 E-value=2.9e-11 Score=75.86 Aligned_cols=109 Identities=5% Similarity=-0.031 Sum_probs=74.5
Q ss_pred ccCC-CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee-CCCcEEEEe
Q psy14817 2 IQTG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIFK 79 (138)
Q Consensus 2 s~~~-~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~-~d~~i~i~~ 79 (138)
.+++ ..+++++.++.|.+||.... +.+..+.. +...+ .++|+|++.+++.++ .++.|.+||
T Consensus 6 ~~~~~~~~v~~~~~~~v~~~d~~~~---------------~~~~~~~~-~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d 68 (331)
T 3u4y_A 6 QTTSNFGIVVEQHLRRISFFSTDTL---------------EILNQITL-GYDFV-DTAITSDCSNVVVTSDFCQTLVQIE 68 (331)
T ss_dssp -CCCCEEEEEEGGGTEEEEEETTTC---------------CEEEEEEC-CCCEE-EEEECSSSCEEEEEESTTCEEEEEE
T ss_pred cCCCCEEEEEecCCCeEEEEeCccc---------------ceeeeEEc-cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEE
Confidence 4444 45888999999999997443 22444444 44556 999999999655554 488999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCC---cEEEEEcCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG---DVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~---~v~~wd~~~~~ 137 (138)
+..+. ........+..+..+++|+|+ +++++++..++ .|.+||+.+++
T Consensus 69 ~~~~~---------~~~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~~~~i~v~d~~~~~ 119 (331)
T 3u4y_A 69 TQLEP---------PKVVAIQEGQSSMADVDITPD-DQFAVTVTGLNHPFNMQSYSFLKNK 119 (331)
T ss_dssp CSSSS---------CEEEEEEECSSCCCCEEECTT-SSEEEECCCSSSSCEEEEEETTTTE
T ss_pred CCCCc---------eeEEecccCCCCccceEECCC-CCEEEEecCCCCcccEEEEECCCCC
Confidence 98765 112222234445445999999 88888555553 89999998764
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.36 E-value=5e-12 Score=86.91 Aligned_cols=96 Identities=16% Similarity=0.137 Sum_probs=66.8
Q ss_pred CccCCCeEEEeeC---------CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC
Q psy14817 1 MIQTGSRLATCSD---------DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 71 (138)
Q Consensus 1 ~s~~~~~l~t~s~---------d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~ 71 (138)
|||||++|+.++. |+.|++||+..... +.... ....+..++|+|+|+.|+.+.
T Consensus 67 ~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~---------------~~~~~--l~~~~~~~~~SPDG~~la~~~- 128 (719)
T 1z68_A 67 LSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF---------------VRGNE--LPRPIQYLCWSPVGSKLAYVY- 128 (719)
T ss_dssp ECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE---------------CCSSC--CCSSBCCEEECSSTTCEEEEE-
T ss_pred ECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc---------------cccee--cCcccccceECCCCCEEEEEE-
Confidence 6899999999876 79999999754311 10001 123578899999999888875
Q ss_pred CCcEEEEeccCCCCCCceeeeeeeeeee-ccccc-----------------ceeEEEEccCCCCEEEEEeCC
Q psy14817 72 DDAIRIFKENPEAGDSDMVSFDLVHTEH-RAHNQ-----------------DVNCVAWNPVVPGMLASCSDD 125 (138)
Q Consensus 72 d~~i~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----------------~v~~~~~~~~~~~~l~~~~~d 125 (138)
++.|++|++..+. ..... .++.. ....+.|+|+ ++.|++++.|
T Consensus 129 ~~~i~~~~~~~g~----------~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPD-G~~la~~~~d 189 (719)
T 1z68_A 129 QNNIYLKQRPGDP----------PFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPN-GKFLAYAEFN 189 (719)
T ss_dssp TTEEEEESSTTSC----------CEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTT-SSEEEEEEEE
T ss_pred CCeEEEEeCCCCC----------cEEEecCCCcCCeEcccccceeeeecccCcccEEECCC-CCEEEEEEEC
Confidence 6799999997654 11111 11211 1258999999 9999988765
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.4e-10 Score=72.76 Aligned_cols=113 Identities=9% Similarity=0.046 Sum_probs=76.7
Q ss_pred CccCCCeEEEeeCCC---cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCe-EEEeeCCCc-E
Q psy14817 1 MIQTGSRLATCSDDA---TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDL-IATACGDDA-I 75 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~---~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~-~~s~~~d~~-i 75 (138)
|+|+|++++++..++ .|.+||+... +.+..+.. .....+++|+|++++ +++...++. +
T Consensus 91 ~s~dg~~l~~~~~~~~~~~i~v~d~~~~---------------~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~i 153 (331)
T 3u4y_A 91 ITPDDQFAVTVTGLNHPFNMQSYSFLKN---------------KFISTIPI--PYDAVGIAISPNGNGLILIDRSSANTV 153 (331)
T ss_dssp ECTTSSEEEECCCSSSSCEEEEEETTTT---------------EEEEEEEC--CTTEEEEEECTTSSCEEEEEETTTTEE
T ss_pred ECCCCCEEEEecCCCCcccEEEEECCCC---------------CeEEEEEC--CCCccceEECCCCCEEEEEecCCCceE
Confidence 589999999665553 8999997432 33444443 345789999999984 455566688 9
Q ss_pred EEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEE-EEEeCCCcEEEEEcCCCC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGML-ASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~d~~v~~wd~~~~~ 137 (138)
.+|++.... ...... .... .....+..++|+|+ ++++ +++..++.|.+||+.+++
T Consensus 154 ~~~~~~~~g---~~~~~~--~~~~-~~~~~~~~~~~spd-g~~l~v~~~~~~~v~v~d~~~~~ 209 (331)
T 3u4y_A 154 RRFKIDADG---VLFDTG--QEFI-SGGTRPFNITFTPD-GNFAFVANLIGNSIGILETQNPE 209 (331)
T ss_dssp EEEEECTTC---CEEEEE--EEEE-CSSSSEEEEEECTT-SSEEEEEETTTTEEEEEECSSTT
T ss_pred EEEEECCCC---cEeecC--Cccc-cCCCCccceEECCC-CCEEEEEeCCCCeEEEEECCCCc
Confidence 999998533 111111 1111 33456789999999 8755 555568999999998765
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.32 E-value=1.8e-11 Score=84.68 Aligned_cols=106 Identities=16% Similarity=0.126 Sum_probs=78.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCcc-----CeEEEEEecCCCeEEEeeCC---
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR-----TIYDISWCHLTDLIATACGD--- 72 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~v~~~~~~~~~~s~~~d--- 72 (138)
|+|+|++++++ |+.|++||+.... +...+.. |.. ....+.|+|+|++++.++.+
T Consensus 24 w~~dg~~~~~~--~~~i~~~~~~~~~---------------~~~~~~~-~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~ 85 (740)
T 4a5s_A 24 WISDHEYLYKQ--ENNILVFNAEYGN---------------SSVFLEN-STFDEFGHSINDYSISPDGQFILLEYNYVKQ 85 (740)
T ss_dssp ECSSSEEEEEE--TTEEEEEETTTCC---------------EEEEECT-TTTTTCCSCCCEEEECTTSSEEEEEEEEEEC
T ss_pred ECCCCcEEEEc--CCcEEEEECCCCc---------------eEEEEec-hhhhhhcccccceEECCCCCEEEEEECCeee
Confidence 68999999986 9999999975432 2333444 322 23458899999988888775
Q ss_pred ------CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 73 ------DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 73 ------~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.+.+||+..+. ... ...+...+...+|+|+ ++.|+.+. |+.|.+|++.+++
T Consensus 86 ~r~~~~~~~~~~d~~~~~----------~~~-l~~~~~~~~~~~~SPd-G~~la~~~-~~~i~~~~~~~~~ 143 (740)
T 4a5s_A 86 WRHSYTASYDIYDLNKRQ----------LIT-EERIPNNTQWVTWSPV-GHKLAYVW-NNDIYVKIEPNLP 143 (740)
T ss_dssp SSSCEEEEEEEEETTTTE----------ECC-SSCCCTTEEEEEECSS-TTCEEEEE-TTEEEEESSTTSC
T ss_pred EEEccceEEEEEECCCCc----------EEE-cccCCCcceeeEECCC-CCEEEEEE-CCeEEEEECCCCc
Confidence 556799998765 222 2356678999999999 99988884 7899999987654
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.32 E-value=3.3e-11 Score=81.17 Aligned_cols=105 Identities=10% Similarity=0.009 Sum_probs=75.1
Q ss_pred CccCCC--eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCC----Cc
Q psy14817 1 MIQTGS--RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD----DA 74 (138)
Q Consensus 1 ~s~~~~--~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d----~~ 74 (138)
|+|+|+ .+++++.|+. .+||+.... . ..+.. +.. .+++|+|+|++++.++.+ ..
T Consensus 117 ~s~dg~~~~~~s~~~~~~-~l~d~~~g~---------------~-~~l~~-~~~--~~~~~spDG~~la~~~~~~~~~~~ 176 (582)
T 3o4h_A 117 GVDTGEAVVFTGATEDRV-ALYALDGGG---------------L-RELAR-LPG--FGFVSDIRGDLIAGLGFFGGGRVS 176 (582)
T ss_dssp EEECSSCEEEEEECSSCE-EEEEEETTE---------------E-EEEEE-ESS--CEEEEEEETTEEEEEEEEETTEEE
T ss_pred eCCCCCeEEEEecCCCCc-eEEEccCCc---------------E-EEeec-CCC--ceEEECCCCCEEEEEEEcCCCCeE
Confidence 467775 4555555554 499975431 1 12222 222 789999999999977766 67
Q ss_pred EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCC--cEEEEEcCCCC
Q psy14817 75 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG--DVKLWQIKLEN 137 (138)
Q Consensus 75 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--~v~~wd~~~~~ 137 (138)
|++||+..+. .. ....+...+..++|+|+ ++.|+++..++ .|++||+.+++
T Consensus 177 i~~~d~~~g~----------~~-~l~~~~~~~~~~~~SpD-G~~l~~~~~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 177 LFTSNLSSGG----------LR-VFDSGEGSFSSASISPG-MKVTAGLETAREARLVTVDPRDGS 229 (582)
T ss_dssp EEEEETTTCC----------CE-EECCSSCEEEEEEECTT-SCEEEEEECSSCEEEEEECTTTCC
T ss_pred EEEEcCCCCC----------ce-EeecCCCccccceECCC-CCEEEEccCCCeeEEEEEcCCCCc
Confidence 9999988765 22 23467778899999999 99999888888 89999988764
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.31 E-value=3.4e-11 Score=75.44 Aligned_cols=108 Identities=7% Similarity=0.091 Sum_probs=75.2
Q ss_pred CccCCCeE-EEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCC----ccCeEEEEEecCCCeEEEee-----
Q psy14817 1 MIQTGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH----GRTIYDISWCHLTDLIATAC----- 70 (138)
Q Consensus 1 ~s~~~~~l-~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~v~~~~~~~~~~s~~----- 70 (138)
|+|+|+++ ++++.++.|.+||+... +.+..+...+ ...+..++|+|++.+++.+.
T Consensus 41 ~s~dg~~l~v~~~~~~~v~~~d~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 105 (337)
T 1pby_B 41 VAPGGRIAYATVNKSESLVKIDLVTG---------------ETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRL 105 (337)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTC---------------CEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEE
T ss_pred EcCCCCEEEEEeCCCCeEEEEECCCC---------------CeEeeEEcCCcccccccccceEECCCCCEEEEEeccccc
Confidence 57899754 66677899999997443 2233333211 22567899999999877775
Q ss_pred -------CCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 71 -------GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 71 -------~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.++.|.+||+..+. ..... .....+..+.|+|+ +++++++ ++.|.+||+.+++
T Consensus 106 ~~~~~~~~~~~i~v~d~~~~~----------~~~~~-~~~~~~~~~~~s~d-g~~l~~~--~~~i~~~d~~~~~ 165 (337)
T 1pby_B 106 ELTHFEVQPTRVALYDAETLS----------RRKAF-EAPRQITMLAWARD-GSKLYGL--GRDLHVMDPEAGT 165 (337)
T ss_dssp CSSCEEECCCEEEEEETTTTE----------EEEEE-ECCSSCCCEEECTT-SSCEEEE--SSSEEEEETTTTE
T ss_pred ccccccccCceEEEEECCCCc----------EEEEE-eCCCCcceeEECCC-CCEEEEe--CCeEEEEECCCCc
Confidence 57899999997654 22222 22346788999999 8877777 6889999998754
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.29 E-value=2.4e-11 Score=82.81 Aligned_cols=117 Identities=9% Similarity=0.065 Sum_probs=76.9
Q ss_pred CccCCCeEEEeeCC----------CcEEEeeccCCCCCCCccCCCCCCceEEeEEec-CCCccCeEEEEEecCCCeEEEe
Q psy14817 1 MIQTGSRLATCSDD----------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHGRTIYDISWCHLTDLIATA 69 (138)
Q Consensus 1 ~s~~~~~l~t~s~d----------~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~v~~~~~~~~~~s~ 69 (138)
|||||+.|+.++.| ..|.+|++........ . + ...+. . +...+..++|+|+|++|+.+
T Consensus 137 ~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-------~--~-~~~l~~~-~~~~~~~~~~SpDG~~la~~ 205 (662)
T 3azo_A 137 LLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR-------S--A-VRELSDD-AHRFVTGPRLSPDGRQAVWL 205 (662)
T ss_dssp EETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG-------G--G-SEESSCS-CSSEECCCEECTTSSEEEEE
T ss_pred ECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccC-------C--c-eeEEEec-CCCcccCceECCCCCEEEEE
Confidence 68999999999887 5899999754210000 0 0 12333 3 44567789999999988776
Q ss_pred eCC--------CcEEEEecc-CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCC--cEEEEEcCCC
Q psy14817 70 CGD--------DAIRIFKEN-PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG--DVKLWQIKLE 136 (138)
Q Consensus 70 ~~d--------~~i~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--~v~~wd~~~~ 136 (138)
+.+ ..|++|++. .+. ......+...+...+..+.|+|+ ++++++++.++ .|.+||+.++
T Consensus 206 ~~~~~~~~~~~~~i~~~d~~~~g~-------~~~~~~l~~~~~~~~~~~~~spd-g~l~~~~~~~~~~~l~~~~~~~~ 275 (662)
T 3azo_A 206 AWDHPRMPWEGTELKTARVTEDGR-------FADTRTLLGGPEEAIAQAEWAPD-GSLIVATDRTGWWNLHRVDPATG 275 (662)
T ss_dssp EECTTCCTTTCEEEEEEEECTTSC-------EEEEEEEEEETTBCEEEEEECTT-SCEEEEECTTSSCEEEEECTTTC
T ss_pred ECCCCCCCCCCcEEEEEEECCCCc-------ccccEEeCCCCCceEcceEECCC-CeEEEEECCCCCeEEEEEECCCC
Confidence 644 369999987 341 00022233345678899999999 78888888888 5555555443
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.28 E-value=9.4e-10 Score=69.96 Aligned_cols=122 Identities=7% Similarity=0.036 Sum_probs=75.1
Q ss_pred CccCCCeEEE-eeCCCcEEEeeccCCCCCCCccCCCCCCceEEe---EEecCCCccCeEEEEEecCCCeEEEee-CCCcE
Q psy14817 1 MIQTGSRLAT-CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV---CTLSGHHGRTIYDISWCHLTDLIATAC-GDDAI 75 (138)
Q Consensus 1 ~s~~~~~l~t-~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~v~~~~~~~~~~s~~-~d~~i 75 (138)
|+|+|++++. ...++.|.+|++........ ....... ..........+..++|+|++++++.++ .++.|
T Consensus 162 ~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~------~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v 235 (361)
T 3scy_A 162 ITPDGKYLLADDLGTDQIHKFNINPNANADN------KEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTV 235 (361)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTCCTTT------CCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEEEcCCCCccc------ccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeE
Confidence 5899986554 45589999999854321000 0000111 111121355678999999999776666 68899
Q ss_pred EEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC--CCcEEEEEcC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD--DGDVKLWQIK 134 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--d~~v~~wd~~ 134 (138)
.+|++..+. ............+...+..++|+|+ +++|++++. ++.|.+|++.
T Consensus 236 ~v~~~~~g~-----~~~~~~~~~~~~~~~~~~~i~~spd-g~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 236 IAFRYADGM-----LDEIQTVAADTVNAQGSGDIHLSPD-GKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEEEEETTE-----EEEEEEEESCSSCCCCEEEEEECTT-SSEEEEEECSSSCEEEEEEEC
T ss_pred EEEEecCCc-----eEEeEEEecCCCCCCCcccEEECCC-CCEEEEECCCCCCEEEEEEEc
Confidence 999998432 1000011111223345689999999 888866665 4889999985
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.27 E-value=7e-10 Score=70.87 Aligned_cols=115 Identities=12% Similarity=0.085 Sum_probs=75.1
Q ss_pred CccCCCe--EEEee-------------CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCe
Q psy14817 1 MIQTGSR--LATCS-------------DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDL 65 (138)
Q Consensus 1 ~s~~~~~--l~t~s-------------~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~ 65 (138)
|+|+|++ +++++ .++.+.+|++..... ....+..+...+...+.+++|+|+|++
T Consensus 90 ~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~-----------~~~~~~~~~~~~~~~~~~~~~spdG~~ 158 (365)
T 1jof_A 90 ADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGK-----------LEKNVQNYEYQENTGIHGMVFDPTETY 158 (365)
T ss_dssp TTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCC-----------EEEEEEEEECCTTCCEEEEEECTTSSE
T ss_pred ECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCc-----------CcceEeeEEeCCCCcceEEEECCCCCE
Confidence 6899984 55654 689999999853211 011122221113567899999999997
Q ss_pred EEEee-CCCcEEEEecc-CCCCCCceeeeeeeeeee-cccccceeEEEEccCCCCEEEEEeC-CCcEEEEEcC
Q psy14817 66 IATAC-GDDAIRIFKEN-PEAGDSDMVSFDLVHTEH-RAHNQDVNCVAWNPVVPGMLASCSD-DGDVKLWQIK 134 (138)
Q Consensus 66 ~~s~~-~d~~i~i~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~-d~~v~~wd~~ 134 (138)
++++. .++.|.+|++. .+. .. ...... ..+...+..++|+|+ ++++++++. ++.|.+|++.
T Consensus 159 l~~~~~~~~~v~~~~~~~~g~-----~~--~~~~~~~~~~g~~p~~~~~spd-g~~l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 159 LYSADLTANKLWTHRKLASGE-----VE--LVGSVDAPDPGDHPRWVAMHPT-GNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp EEEEETTTTEEEEEEECTTSC-----EE--EEEEEECSSTTCCEEEEEECTT-SSEEEEEETTTTEEEEEEEC
T ss_pred EEEEcCCCCEEEEEEECCCCC-----EE--EeeeEecCCCCCCCCEeEECCC-CCEEEEEECCCCeEEEEEEe
Confidence 77665 36789999997 333 00 011111 113466899999999 888877765 7889999765
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.27 E-value=2.1e-10 Score=71.86 Aligned_cols=107 Identities=9% Similarity=-0.040 Sum_probs=75.4
Q ss_pred CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCcc-CeEEEEEecCCCe-EEEeeCCCcEEEEeccCC
Q psy14817 6 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR-TIYDISWCHLTDL-IATACGDDAIRIFKENPE 83 (138)
Q Consensus 6 ~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~v~~~~~~~~-~~s~~~d~~i~i~~~~~~ 83 (138)
+++++++.++.|.+||.... +.+..+...+.. .+..++|+|++.. ++++..++.|.+||+..+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~---------------~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 66 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKM---------------AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTG 66 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT---------------EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTC
T ss_pred cEEEEcCCCCeEEEEECCCC---------------cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCC
Confidence 57899999999999996432 345555431221 4788999999975 456666789999999876
Q ss_pred CCCCceeeeeeeeeeecc----cccceeEEEEccCCCCEEEEEe------------CCCcEEEEEcCCCC
Q psy14817 84 AGDSDMVSFDLVHTEHRA----HNQDVNCVAWNPVVPGMLASCS------------DDGDVKLWQIKLEN 137 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~~------------~d~~v~~wd~~~~~ 137 (138)
. ........ +...+..++|+|+ ++.+++++ .++.|.+||+.+++
T Consensus 67 ~---------~~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~ 126 (337)
T 1pby_B 67 E---------TLGRIDLSTPEERVKSLFGAALSPD-GKTLAIYESPVRLELTHFEVQPTRVALYDAETLS 126 (337)
T ss_dssp C---------EEEEEECCBTTEEEECTTCEEECTT-SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE
T ss_pred C---------eEeeEEcCCcccccccccceEECCC-CCEEEEEecccccccccccccCceEEEEECCCCc
Confidence 5 11111111 1236778999999 88888775 57999999997653
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.24 E-value=6.8e-10 Score=70.91 Aligned_cols=120 Identities=8% Similarity=0.004 Sum_probs=74.0
Q ss_pred CccCCCeEEEee-CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC-CccCeEEEEEecCCCeEEEeeC-CCcEEE
Q psy14817 1 MIQTGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGRTIYDISWCHLTDLIATACG-DDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~s~~~-d~~i~i 77 (138)
|+|+|++++++. .++.|++|++.... ....+..+... +...+..++|+|++++++.++. ++.+.+
T Consensus 152 ~spdG~~l~~~~~~~~~v~~~~~~~~g------------~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v 219 (365)
T 1jof_A 152 FDPTETYLYSADLTANKLWTHRKLASG------------EVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICE 219 (365)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTS------------CEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred ECCCCCEEEEEcCCCCEEEEEEECCCC------------CEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEE
Confidence 589999887765 46899999985211 01223333311 3456899999999998777664 678999
Q ss_pred EeccCCCCCCceeeeeeeeeee---ccccc------ceeEEE-EccCCCCEEEEEeCCC------cEEEEEcC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEH---RAHNQ------DVNCVA-WNPVVPGMLASCSDDG------DVKLWQIK 134 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~------~v~~~~-~~~~~~~~l~~~~~d~------~v~~wd~~ 134 (138)
|++....+... .......... .++.. .+..++ |+|+ +++|++++.+. .|.+|++.
T Consensus 220 ~~~~~~~g~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spd-G~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 220 YVIDPATHMPV-YTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFS-GKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp EEECTTTCCEE-EEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTT-SSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred EEEeCCCCcEE-EccceEEcCCCCcCCcccccccccccccEEEECCC-CCEEEEECCCCCCCCCCeEEEEEEC
Confidence 98764221100 0000011111 11222 578899 9999 88877665432 79999985
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.23 E-value=3.8e-10 Score=72.72 Aligned_cols=97 Identities=7% Similarity=0.088 Sum_probs=73.0
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
++++|+++ .++.|++||+..... ...... +...+..+.+.+. .++.+..||.|.+|++...
T Consensus 96 d~~~L~v~-~~~~l~v~dv~sl~~---------------~~~~~~-~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~ 156 (388)
T 1xip_A 96 HGDQVLVS-TRNALYSLDLEELSE---------------FRTVTS-FEKPVFQLKNVNN--TLVILNSVNDLSALDLRTK 156 (388)
T ss_dssp ETTEEEEE-ESSEEEEEESSSTTC---------------EEEEEE-CSSCEEEEEECSS--EEEEEETTSEEEEEETTTC
T ss_pred CCCEEEEE-cCCcEEEEEchhhhc---------------cCccce-eecceeeEEecCC--CEEEEECCCCEEEEEccCC
Confidence 67888888 889999999865432 112233 4556777776643 3888899999999999866
Q ss_pred CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 84 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
. .. .+...|++++|+|. + ++.|..||++++|+....
T Consensus 157 ~----------~~----~~~~~Vs~v~WSpk-G--~~vg~~dg~i~~~~~~~~ 192 (388)
T 1xip_A 157 S----------TK----QLAQNVTSFDVTNS-Q--LAVLLKDRSFQSFAWRNG 192 (388)
T ss_dssp C----------EE----EEEESEEEEEECSS-E--EEEEETTSCEEEEEEETT
T ss_pred c----------cc----cccCCceEEEEcCC-c--eEEEEcCCcEEEEcCCCc
Confidence 5 21 13458999999998 6 778999999999987654
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.20 E-value=2.3e-10 Score=72.05 Aligned_cols=110 Identities=9% Similarity=0.011 Sum_probs=72.6
Q ss_pred CccCCCeE-EEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCC-----ccCeEEEEEecCCCeEEEeeCC--
Q psy14817 1 MIQTGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-----GRTIYDISWCHLTDLIATACGD-- 72 (138)
Q Consensus 1 ~s~~~~~l-~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~v~~~~~~~~~~s~~~d-- 72 (138)
|+|+|+++ +++..++.|.+||+... +.+..+...+ ...+..++|+|+++++++++.+
T Consensus 50 ~s~dg~~~~v~~~~~~~i~~~d~~t~---------------~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 114 (349)
T 1jmx_B 50 MAPDNRTAYVLNNHYGDIYGIDLDTC---------------KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQ 114 (349)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTT---------------EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEE
T ss_pred ECCCCCEEEEEeCCCCcEEEEeCCCC---------------cEEEEEEcccccccccccccceEECCCCCEEEEEccccc
Confidence 57889854 56667899999997432 2333333212 2336789999999988887755
Q ss_pred ----------CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 73 ----------DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 73 ----------~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.|.+||+..+.... ..... .+...+.+++|+|+ +. ++.++ +.|.+||+.+++
T Consensus 115 ~~~~~~~~~~~~i~~~d~~~~~~~~-------~~~~~-~~~~~~~~~~~s~d-g~-l~~~~--~~i~~~d~~~~~ 177 (349)
T 1jmx_B 115 RLNDHYVVKPPRLEVFSTADGLEAK-------PVRTF-PMPRQVYLMRAADD-GS-LYVAG--PDIYKMDVKTGK 177 (349)
T ss_dssp ECSSCEEECCCEEEEEEGGGGGGBC-------CSEEE-ECCSSCCCEEECTT-SC-EEEES--SSEEEECTTTCC
T ss_pred ccccccccCCCeEEEEECCCccccc-------eeeec-cCCCcccceeECCC-Cc-EEEcc--CcEEEEeCCCCc
Confidence 899999998643000 11111 23346888999999 77 54544 349999987764
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=9.2e-10 Score=75.64 Aligned_cols=108 Identities=5% Similarity=0.005 Sum_probs=74.5
Q ss_pred Ccc--CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEE-EEEecCCCeEEE-eeCCC---
Q psy14817 1 MIQ--TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYD-ISWCHLTDLIAT-ACGDD--- 73 (138)
Q Consensus 1 ~s~--~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-v~~~~~~~~~~s-~~~d~--- 73 (138)
|+| +|+++++++.|+.++||.+.... ..+..+.. +...+.. +.|+|++..++. +..++
T Consensus 317 ~sp~~dg~~l~~~~~~g~~~l~~~~~~~--------------~~~~~l~~-~~~~v~~~~~~spdg~~l~~~~~~~~~~~ 381 (706)
T 2z3z_A 317 FLPGSNNQFIWQSRRDGWNHLYLYDTTG--------------RLIRQVTK-GEWEVTNFAGFDPKGTRLYFESTEASPLE 381 (706)
T ss_dssp ECTTCSSEEEEEECTTSSCEEEEEETTS--------------CEEEECCC-SSSCEEEEEEECTTSSEEEEEESSSCTTC
T ss_pred eecCCCCEEEEEEccCCccEEEEEECCC--------------CEEEecCC-CCeEEEeeeEEcCCCCEEEEEecCCCCce
Confidence 578 99999999999999999975211 23455555 5667776 799999986654 44444
Q ss_pred -cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC----CcEEEEEcCCC
Q psy14817 74 -AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD----GDVKLWQIKLE 136 (138)
Q Consensus 74 -~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----~~v~~wd~~~~ 136 (138)
.|..|++..+. .... .+...+..++|+|+ +++++..+.+ +.+.+||+.++
T Consensus 382 ~~l~~~d~~~~~----------~~~l--~~~~~~~~~~~spd-g~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 382 RHFYCIDIKGGK----------TKDL--TPESGMHRTQLSPD-GSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp BEEEEEETTCCC----------CEES--CCSSSEEEEEECTT-SSEEEEEEECSSCSCEEEEEESSSC
T ss_pred EEEEEEEcCCCC----------ceec--cCCCceEEEEECCC-CCEEEEEecCCCCCcEEEEEECCCC
Confidence 45555655432 1111 24567889999999 8877665443 45999998765
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.16 E-value=4.4e-10 Score=77.84 Aligned_cols=96 Identities=14% Similarity=0.126 Sum_probs=67.0
Q ss_pred CccCCCeEEEeeCC---------CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC
Q psy14817 1 MIQTGSRLATCSDD---------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 71 (138)
Q Consensus 1 ~s~~~~~l~t~s~d---------~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~ 71 (138)
|||||++|+.++.+ +.+.+||+.... ...+.. +...+...+|+|+|+.++.+.
T Consensus 69 ~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~----------------~~~l~~-~~~~~~~~~~SPdG~~la~~~- 130 (740)
T 4a5s_A 69 ISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ----------------LITEER-IPNNTQWVTWSPVGHKLAYVW- 130 (740)
T ss_dssp ECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE----------------ECCSSC-CCTTEEEEEECSSTTCEEEEE-
T ss_pred ECCCCCEEEEEECCeeeEEEccceEEEEEECCCCc----------------EEEccc-CCCcceeeEECCCCCEEEEEE-
Confidence 59999999999887 556699975432 223444 567899999999999888774
Q ss_pred CCcEEEEeccCCCCCCceeeeeeeeeee-cccc-----------------cceeEEEEccCCCCEEEEEeCC
Q psy14817 72 DDAIRIFKENPEAGDSDMVSFDLVHTEH-RAHN-----------------QDVNCVAWNPVVPGMLASCSDD 125 (138)
Q Consensus 72 d~~i~i~~~~~~~~~~~~~~~~~~~~~~-~~~~-----------------~~v~~~~~~~~~~~~l~~~~~d 125 (138)
++.|++|++..+. ...+. .++. .....+.|+|+ ++.|+.++.|
T Consensus 131 ~~~i~~~~~~~~~----------~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpD-g~~la~~~~d 191 (740)
T 4a5s_A 131 NNDIYVKIEPNLP----------SYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPN-GTFLAYAQFN 191 (740)
T ss_dssp TTEEEEESSTTSC----------CEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTT-SSEEEEEEEE
T ss_pred CCeEEEEECCCCc----------eEEEcCCCCccceecCcccccccchhcCCCcceEECCC-CCEEEEEEEc
Confidence 6789999987654 11111 1121 12235899999 9988887643
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.14 E-value=1.7e-09 Score=73.87 Aligned_cols=109 Identities=15% Similarity=0.071 Sum_probs=70.8
Q ss_pred CccCCCeEEEeeCCC--------cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCC
Q psy14817 1 MIQTGSRLATCSDDA--------TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 72 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~--------~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d 72 (138)
|||||++|+.++.++ .|.+||+..... ......+...+...+..+.|+|+|++++++..+
T Consensus 195 ~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~------------~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~ 262 (662)
T 3azo_A 195 LSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR------------FADTRTLLGGPEEAIAQAEWAPDGSLIVATDRT 262 (662)
T ss_dssp ECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC------------EEEEEEEEEETTBCEEEEEECTTSCEEEEECTT
T ss_pred ECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc------------ccccEEeCCCCCceEcceEECCCCeEEEEECCC
Confidence 689999999887553 799999752110 011222322246788999999999988888888
Q ss_pred Cc--EEEEeccCCCCCCceeeeeeeeeeecccccc--------eeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 73 DA--IRIFKENPEAGDSDMVSFDLVHTEHRAHNQD--------VNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 73 ~~--i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
+. |.+|++..+. .......+... +..++|+|+ +.++++++. +.+++|.+
T Consensus 263 ~~~~l~~~~~~~~~----------~~~l~~~~~~~~~p~w~~~~~~~~~~~~-~~~~~~~~~-~~~~l~~~ 321 (662)
T 3azo_A 263 GWWNLHRVDPATGA----------ATQLCRREEEFAGPLWTPGMRWFAPLAN-GLIAVVHGK-GAAVLGIL 321 (662)
T ss_dssp SSCEEEEECTTTCC----------EEESSCCSSBSSCCCCSTTCCSEEECTT-SCEEEEEBS-SSCEEEEE
T ss_pred CCeEEEEEECCCCc----------eeecccccccccCccccccCceEeEeCC-CEEEEEEEc-CccEEEEE
Confidence 84 5555543333 11111111111 567888888 889999988 99999943
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.13 E-value=1.9e-09 Score=69.00 Aligned_cols=110 Identities=10% Similarity=-0.032 Sum_probs=72.4
Q ss_pred CccCCCeEEEeeC-CCc--EEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEE
Q psy14817 1 MIQTGSRLATCSD-DAT--VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s~-d~~--v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i 77 (138)
|||||++|+.++. ++. |.+||+... +....... +...+..+.|+|+++.|+.++.++.|++
T Consensus 43 ~SpDg~~l~~~~~~~g~~~l~~~d~~~g---------------~~~~lt~~-~~~~~~~~~~spdg~~l~~~~~~~~l~~ 106 (388)
T 3pe7_A 43 FTRDGSKLLFGGAFDGPWNYYLLDLNTQ---------------VATQLTEG-RGDNTFGGFLSPDDDALFYVKDGRNLMR 106 (388)
T ss_dssp BCTTSCEEEEEECTTSSCEEEEEETTTC---------------EEEECCCS-SCBCSSSCEECTTSSEEEEEETTTEEEE
T ss_pred CCCCCCEEEEEEcCCCCceEEEEeCCCC---------------ceEEeeeC-CCCCccceEEcCCCCEEEEEeCCCeEEE
Confidence 6899999998887 674 666675322 22333333 4444556789999999999998889999
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEE--EccCCCCEEEEE----------------------eCCCcEEEEEc
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVA--WNPVVPGMLASC----------------------SDDGDVKLWQI 133 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~l~~~----------------------~~d~~v~~wd~ 133 (138)
||+..+. .......+...+.... ++|+ +..++.. ..+..|.+||+
T Consensus 107 ~d~~~g~----------~~~~~~~~~~~~~~~~~~~~~d-g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 175 (388)
T 3pe7_A 107 VDLATLE----------ENVVYQVPAEWVGYGTWVANSD-CTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDL 175 (388)
T ss_dssp EETTTCC----------EEEEEECCTTEEEEEEEEECTT-SSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEET
T ss_pred EECCCCc----------ceeeeechhhcccccceeECCC-CCeeccccccCcccccccccchhhhhhccCCcceEEEEEC
Confidence 9998765 2222223333343333 3777 7777632 24467899998
Q ss_pred CCCC
Q psy14817 134 KLEN 137 (138)
Q Consensus 134 ~~~~ 137 (138)
.+++
T Consensus 176 ~~g~ 179 (388)
T 3pe7_A 176 KTGE 179 (388)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 7764
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.12 E-value=8.4e-09 Score=63.56 Aligned_cols=108 Identities=8% Similarity=0.092 Sum_probs=75.0
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC-CccCeEEEEEecCCCeEEEeeCCC-cEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGRTIYDISWCHLTDLIATACGDD-AIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~s~~~d~-~i~i~ 78 (138)
++|+|+++++.+.++.|++|+... +.+..+... +...+..+++++++.++++...++ .|.+|
T Consensus 171 ~~~~g~l~v~~~~~~~i~~~~~~g----------------~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~ 234 (286)
T 1q7f_A 171 VNDKQEIFISDNRAHCVKVFNYEG----------------QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIF 234 (286)
T ss_dssp ECSSSEEEEEEGGGTEEEEEETTC----------------CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEE
T ss_pred ECCCCCEEEEECCCCEEEEEcCCC----------------CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEE
Confidence 367888888888899999999521 123344331 235788999999999888887775 99999
Q ss_pred eccCCCCCCceeeeeeeeeeec-ccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHR-AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+..... ...... .....+..+++.|+ ++++++ +.|+.|++|++...
T Consensus 235 ~~~g~~----------~~~~~~~~~~~~~~~i~~~~~-g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 235 TQDGQL----------ISALESKVKHAQCFDVALMDD-GSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp CTTSCE----------EEEEEESSCCSCEEEEEEETT-TEEEEE-ETTTEEEEEECSCC
T ss_pred CCCCCE----------EEEEcccCCCCcceeEEECCC-CcEEEE-CCCCeEEEEEcccc
Confidence 854221 111111 12234778999998 877766 67999999998654
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.05 E-value=1.6e-09 Score=74.57 Aligned_cols=112 Identities=15% Similarity=0.039 Sum_probs=72.9
Q ss_pred CccCCCeEE-----EeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCc-
Q psy14817 1 MIQTGSRLA-----TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDA- 74 (138)
Q Consensus 1 ~s~~~~~l~-----t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~- 74 (138)
|||||++|| .|+++..|++||+....... ...+.. .....++|+|+++.|+.++.|..
T Consensus 128 ~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-------------~~~~~~---~~~~~~~wspDg~~l~~~~~d~~~ 191 (695)
T 2bkl_A 128 VSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-------------VDVIEG---GKYATPKWTPDSKGFYYEWLPTDP 191 (695)
T ss_dssp ECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS-------------SCCBSC---CTTCCCEECTTSSEEEEEECCCCT
T ss_pred ECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC-------------CcccCc---ccccceEEecCCCEEEEEEecCCC
Confidence 689999999 66667899999986543210 001111 11257899999998888887665
Q ss_pred ------------EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCC----cEEEEEcCC
Q psy14817 75 ------------IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG----DVKLWQIKL 135 (138)
Q Consensus 75 ------------i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~----~v~~wd~~~ 135 (138)
|++|++..+. ... ........+...+..+.|+|+ +++|+.++.++ .|.+++..+
T Consensus 192 ~~~~~~~~~~~~v~~~~l~t~~---~~~---~lv~~~~~~~~~~~~~~~SpD-G~~l~~~~~~~~~~~~l~~~~~~~ 261 (695)
T 2bkl_A 192 SIKVDERPGYTTIRYHTLGTEP---SKD---TVVHERTGDPTTFLQSDLSRD-GKYLFVYILRGWSENDVYWKRPGE 261 (695)
T ss_dssp TSCGGGGGGGCEEEEEETTSCG---GGC---EEEECCCCCTTCEEEEEECTT-SCCEEEEEEETTTEEEEEEECTTC
T ss_pred CCccccCCCCCEEEEEECCCCc---hhc---eEEEecCCCCEEEEEEEECCC-CCEEEEEEeCCCCceEEEEEcCCC
Confidence 9999987653 000 011111234457889999999 88887776655 566665543
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=7.3e-09 Score=71.52 Aligned_cols=111 Identities=8% Similarity=-0.006 Sum_probs=73.4
Q ss_pred CccCCCeEEEeeCCC-----cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCc-
Q psy14817 1 MIQTGSRLATCSDDA-----TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDA- 74 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~-----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~- 74 (138)
|||||++||.++.++ .|++||+... +.+..... ...+..+.|+|+++.|+.++.++.
T Consensus 132 ~SPDg~~la~~~~~~G~~~~~i~v~d~~tg---------------~~~~~~~~--~~~~~~~~wspDg~~l~~~~~~~~~ 194 (710)
T 2xdw_A 132 FSEDGEYFAYGLSASGSDWVTIKFMKVDGA---------------KELPDVLE--RVKFSCMAWTHDGKGMFYNAYPQQD 194 (710)
T ss_dssp ECTTSSEEEEEEEETTCSCEEEEEEETTTT---------------EEEEEEEE--EECSCCEEECTTSSEEEEEECCCCS
T ss_pred ECCCCCEEEEEEcCCCCceEEEEEEECCCC---------------CCCccccc--CcccceEEEEeCCCEEEEEEECCcc
Confidence 689999999776543 8999997543 11221111 223667999999998887777655
Q ss_pred ---------------EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-----CCcEEEEEcC
Q psy14817 75 ---------------IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-----DGDVKLWQIK 134 (138)
Q Consensus 75 ---------------i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-----d~~v~~wd~~ 134 (138)
|++|++..+. ... ........+...+..+.|+|+ +++|+..+. +..|.+||+.
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~l~t~~---~~~---~~v~~~~~~~~~~~~~~~SpD-g~~l~~~~~~~~~~~~~l~~~d~~ 267 (710)
T 2xdw_A 195 GKSDGTETSTNLHQKLYYHVLGTDQ---SED---ILCAEFPDEPKWMGGAELSDD-GRYVLLSIREGCDPVNRLWYCDLQ 267 (710)
T ss_dssp SCCSSSCCCCCCCCEEEEEETTSCG---GGC---EEEECCTTCTTCEEEEEECTT-SCEEEEEEECSSSSCCEEEEEEGG
T ss_pred ccccccccccCCCCEEEEEECCCCc---ccc---eEEeccCCCCeEEEEEEEcCC-CCEEEEEEEccCCCccEEEEEECc
Confidence 9999987543 000 011111123456778999999 888776654 5689999987
Q ss_pred C
Q psy14817 135 L 135 (138)
Q Consensus 135 ~ 135 (138)
+
T Consensus 268 ~ 268 (710)
T 2xdw_A 268 Q 268 (710)
T ss_dssp G
T ss_pred c
Confidence 5
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=98.99 E-value=3.9e-08 Score=60.59 Aligned_cols=108 Identities=7% Similarity=0.071 Sum_probs=76.0
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC-CCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-HHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
++|+|+++++...++.|.+|+... +.+..+.. .+...+.++++++++.++++...++.|++|+
T Consensus 128 ~~~~g~l~v~~~~~~~i~~~~~~g----------------~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~ 191 (286)
T 1q7f_A 128 VDNKGRIIVVECKVMRVIIFDQNG----------------NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFN 191 (286)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTS----------------CEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEE
T ss_pred EeCCCCEEEEECCCCEEEEEcCCC----------------CEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEc
Confidence 357888888888889999999521 11222221 1345689999999999888877888999999
Q ss_pred ccCCCCCCceeeeeeeeeee-cccccceeEEEEccCCCCEEEEEeCCC-cEEEEEcCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEH-RAHNQDVNCVAWNPVVPGMLASCSDDG-DVKLWQIKL 135 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~-~v~~wd~~~ 135 (138)
..... ..... .++...+..+++.++ ++++++...++ .|.+||...
T Consensus 192 ~~g~~----------~~~~~~~g~~~~p~~i~~d~~-G~l~v~~~~~~~~i~~~~~~g 238 (286)
T 1q7f_A 192 YEGQY----------LRQIGGEGITNYPIGVGINSN-GEILIADNHNNFNLTIFTQDG 238 (286)
T ss_dssp TTCCE----------EEEESCTTTSCSEEEEEECTT-CCEEEEECSSSCEEEEECTTS
T ss_pred CCCCE----------EEEEccCCccCCCcEEEECCC-CCEEEEeCCCCEEEEEECCCC
Confidence 75321 11111 122357889999998 88888887775 999998653
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=98.98 E-value=8e-09 Score=64.94 Aligned_cols=107 Identities=7% Similarity=0.069 Sum_probs=75.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|++++..++..+.++.++.|.- .....+.. +...+.+++|++++.+++++..++.|.+|+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~-~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~ 73 (333)
T 2dg1_A 13 YSGKSNSAVPIISESELQTITA------------------EPWLEISK-KGLQLEGLNFDRQGQLFLLDVFEGNIFKINP 73 (333)
T ss_dssp SCGGGGCSSCCCCGGGSCEEEC------------------EEEEEEES-SCCCEEEEEECTTSCEEEEETTTCEEEEECT
T ss_pred ecCCccceeEEeecccCccccc------------------ceeEEEec-cCccccCcEECCCCCEEEEECCCCEEEEEeC
Confidence 3455555555566677777731 23444555 5567799999999998888888899999998
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC----CcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD----GDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----~~v~~wd~~~~~ 137 (138)
..+. .......+...+.+++++|+ +.++++...+ +.|.+||..++.
T Consensus 74 ~~~~----------~~~~~~~~~~~~~~i~~~~d-g~l~v~~~~~~~~~~~i~~~d~~~~~ 123 (333)
T 2dg1_A 74 ETKE----------IKRPFVSHKANPAAIKIHKD-GRLFVCYLGDFKSTGGIFAATENGDN 123 (333)
T ss_dssp TTCC----------EEEEEECSSSSEEEEEECTT-SCEEEEECTTSSSCCEEEEECTTSCS
T ss_pred CCCc----------EEEEeeCCCCCcceEEECCC-CcEEEEeCCCCCCCceEEEEeCCCCE
Confidence 7654 22222234567999999998 8877777666 689999987654
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=3.6e-08 Score=62.17 Aligned_cols=112 Identities=11% Similarity=0.046 Sum_probs=76.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEe---------cCCCccCeEEEEEec-CCCeEEEee
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL---------SGHHGRTIYDISWCH-LTDLIATAC 70 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~v~~v~~~~-~~~~~~s~~ 70 (138)
++|+|+++++.+.++.|++|+...... .+..+ .. +......++++| ++.++++.+
T Consensus 98 ~d~~g~l~v~d~~~~~v~~~~~~g~~~--------------~~~~~~~~~~~g~~~~-~~~~P~~ia~~~~~g~lyv~d~ 162 (329)
T 3fvz_A 98 IDTDGNYWVTDVALHQVFKLDPHSKEG--------------PLLILGRSMQPGSDQN-HFCQPTDVAVEPSTGAVFVSDG 162 (329)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTCSSC--------------CSEEESBTTBCCCSTT-CCSSEEEEEECTTTCCEEEEEC
T ss_pred ECCCCCEEEEECCCCEEEEEeCCCCeE--------------EEEEecccCCCCCCcc-ccCCCcEEEEeCCCCeEEEEeC
Confidence 468899999999999999999643210 12222 12 345688999999 777888876
Q ss_pred -CCCcEEEEeccCCCCCCceeeeeeeeeee---------cccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 71 -GDDAIRIFKENPEAGDSDMVSFDLVHTEH---------RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 71 -~d~~i~i~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.++.|++|+.. +. ...... ..+-..+..+++.|+.+.++++...++.|++|+..+++
T Consensus 163 ~~~~~I~~~~~~-g~---------~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~ 229 (329)
T 3fvz_A 163 YCNSRIVQFSPS-GK---------FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE 229 (329)
T ss_dssp SSCCEEEEECTT-SC---------EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCeEEEEcCC-CC---------EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc
Confidence 68899999844 22 011110 11224578999999746677777788999999987543
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=98.95 E-value=5.9e-08 Score=62.09 Aligned_cols=108 Identities=8% Similarity=-0.097 Sum_probs=72.0
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEE--EEecCCCeEEEe---------
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI--SWCHLTDLIATA--------- 69 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v--~~~~~~~~~~s~--------- 69 (138)
|||+|+.|+.++.++.|.+||+..... ..+.. . +...+... .+++++.+++..
T Consensus 88 ~spdg~~l~~~~~~~~l~~~d~~~g~~-------------~~~~~--~-~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~ 151 (388)
T 3pe7_A 88 LSPDDDALFYVKDGRNLMRVDLATLEE-------------NVVYQ--V-PAEWVGYGTWVANSDCTKLVGIEIRREDWVP 151 (388)
T ss_dssp ECTTSSEEEEEETTTEEEEEETTTCCE-------------EEEEE--C-CTTEEEEEEEEECTTSSEEEEEEEEGGGCCC
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCcc-------------eeeee--c-hhhcccccceeECCCCCeeccccccCccccc
Confidence 689999999999999999999754322 22222 2 23333333 348888877642
Q ss_pred -------------eCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEcc-CCCCEEEEEeCC------CcEE
Q psy14817 70 -------------CGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP-VVPGMLASCSDD------GDVK 129 (138)
Q Consensus 70 -------------~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d------~~v~ 129 (138)
..+..|.+||+..+. .... ..+...+..+.|+| + +..|+.+..+ ..|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~d~~~g~----------~~~l-~~~~~~~~~~~~sp~d-g~~l~~~~~~~~~~~~~~l~ 219 (388)
T 3pe7_A 152 LTDWKKFHEFYFTKPCCRLMRVDLKTGE----------STVI-LQENQWLGHPIYRPYD-DSTVAFCHEGPHDLVDARMW 219 (388)
T ss_dssp CCSHHHHHHHGGGCCCEEEEEEETTTCC----------EEEE-EEESSCEEEEEEETTE-EEEEEEEECSCTTTSSCSEE
T ss_pred ccccchhhhhhccCCcceEEEEECCCCc----------eEEe-ecCCccccccEECCCC-CCEEEEEEecCCCCCcceEE
Confidence 234578889988765 2222 24556788999999 8 8888776653 3788
Q ss_pred EEEcCCC
Q psy14817 130 LWQIKLE 136 (138)
Q Consensus 130 ~wd~~~~ 136 (138)
++|+..+
T Consensus 220 ~~d~~~~ 226 (388)
T 3pe7_A 220 LINEDGT 226 (388)
T ss_dssp EEETTSC
T ss_pred EEeCCCC
Confidence 8887654
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=1.1e-07 Score=59.95 Aligned_cols=111 Identities=9% Similarity=-0.004 Sum_probs=76.1
Q ss_pred CccCCCeEEEeeCC------------------------CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEE
Q psy14817 1 MIQTGSRLATCSDD------------------------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYD 56 (138)
Q Consensus 1 ~s~~~~~l~t~s~d------------------------~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 56 (138)
++|+|+++++.+.+ +.|.+||.... +.+..+...+......
T Consensus 31 ~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g---------------~~~~~~~~~~~~~p~g 95 (329)
T 3fvz_A 31 LDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNA---------------EILQSSGKNLFYLPHG 95 (329)
T ss_dssp ECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTC---------------CEEEEECTTTCSSEEE
T ss_pred ECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCC---------------eEEeccCCCccCCceE
Confidence 46889999988887 36777875322 2233333224457889
Q ss_pred EEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeee--------cccccceeEEEEccCCCCEEEEEe-CCCc
Q psy14817 57 ISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH--------RAHNQDVNCVAWNPVVPGMLASCS-DDGD 127 (138)
Q Consensus 57 v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~~l~~~~-~d~~ 127 (138)
+++++++.++++...++.|++|+....... ..... ..+-..+..++++|+++.++++.+ .++.
T Consensus 96 ia~d~~g~l~v~d~~~~~v~~~~~~g~~~~--------~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~ 167 (329)
T 3fvz_A 96 LSIDTDGNYWVTDVALHQVFKLDPHSKEGP--------LLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSR 167 (329)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTCSSCC--------SEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCE
T ss_pred EEECCCCCEEEEECCCCEEEEEeCCCCeEE--------EEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCe
Confidence 999999998888888899999997643100 11110 133446889999993288888886 6899
Q ss_pred EEEEEcC
Q psy14817 128 VKLWQIK 134 (138)
Q Consensus 128 v~~wd~~ 134 (138)
|++|+..
T Consensus 168 I~~~~~~ 174 (329)
T 3fvz_A 168 IVQFSPS 174 (329)
T ss_dssp EEEECTT
T ss_pred EEEEcCC
Confidence 9999854
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=98.94 E-value=4.9e-08 Score=59.53 Aligned_cols=109 Identities=9% Similarity=-0.042 Sum_probs=77.5
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
+++|+++++...++.|.+|+...... ...... +...+.++++++++.++++...++.|.+|+..
T Consensus 158 ~~~g~l~v~~~~~~~i~~~~~~~~~~---------------~~~~~~-~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 158 DNSGNVYVTDTDNNRVVKLEAESNNQ---------------VVLPFT-DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTTCCE---------------EECCCS-SCCSEEEEEECTTCCEEEEETTTSCEEEECTT
T ss_pred eCCCCEEEEECCCCEEEEEecCCCce---------------Eeeccc-CCCCceEEEECCCCCEEEEECCCCcEEEEcCC
Confidence 57788888887788999999643211 111112 23568899999999877777778899999886
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
... .......+...+..+++.++ ++++++...++.|+++++...+
T Consensus 222 ~~~----------~~~~~~~~~~~p~~i~~~~~-g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 222 STT----------STVLPFTGLNTPLAVAVDSD-RTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp CSC----------CEECCCCSCSCEEEEEECTT-CCEEEEEGGGTEEEEECCCGGG
T ss_pred CCc----------ceeeccCCCCCceeEEECCC-CCEEEEECCCCEEEEEcCCCcc
Confidence 543 11111123356889999998 8888888899999999987654
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=98.92 E-value=9.8e-08 Score=59.98 Aligned_cols=108 Identities=11% Similarity=0.011 Sum_probs=72.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCC----CcEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD----DAIR 76 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d----~~i~ 76 (138)
|+|+|++++++..++.|.+||..... ....... +...+.++++++++.++++...+ +.|.
T Consensus 52 ~~~~g~l~~~~~~~~~i~~~d~~~~~---------------~~~~~~~-~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~ 115 (333)
T 2dg1_A 52 FDRQGQLFLLDVFEGNIFKINPETKE---------------IKRPFVS-HKANPAAIKIHKDGRLFVCYLGDFKSTGGIF 115 (333)
T ss_dssp ECTTSCEEEEETTTCEEEEECTTTCC---------------EEEEEEC-SSSSEEEEEECTTSCEEEEECTTSSSCCEEE
T ss_pred ECCCCCEEEEECCCCEEEEEeCCCCc---------------EEEEeeC-CCCCcceEEECCCCcEEEEeCCCCCCCceEE
Confidence 46889988888899999999964321 1111212 45679999999999877777665 6799
Q ss_pred EEeccCCCCCCceeeeeeeeeee--cccccceeEEEEccCCCCEEEEEeC------CCcEEEEEcCC
Q psy14817 77 IFKENPEAGDSDMVSFDLVHTEH--RAHNQDVNCVAWNPVVPGMLASCSD------DGDVKLWQIKL 135 (138)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~------d~~v~~wd~~~ 135 (138)
+|+..... ..... ......+..+.+.|+ +.++++... .+.|..+|..+
T Consensus 116 ~~d~~~~~----------~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~~~~~~~l~~~~~~~ 171 (333)
T 2dg1_A 116 AATENGDN----------LQDIIEDLSTAYCIDDMVFDSK-GGFYFTDFRGYSTNPLGGVYYVSPDF 171 (333)
T ss_dssp EECTTSCS----------CEEEECSSSSCCCEEEEEECTT-SCEEEEECCCBTTBCCEEEEEECTTS
T ss_pred EEeCCCCE----------EEEEEccCccCCcccceEECCC-CCEEEEeccccccCCCceEEEEeCCC
Confidence 99887654 11111 123457889999998 887776653 24555555543
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=9.8e-08 Score=64.57 Aligned_cols=106 Identities=6% Similarity=-0.079 Sum_probs=76.0
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc-
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN- 81 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~- 81 (138)
|.+.++++...++.|.++|.... +.+..+.. ...+..+.++|+++++++++.++.|.+||+.
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~---------------~v~~~i~~--g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~ 227 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTY---------------EIKTVLDT--GYAVHISRLSASGRYLFVIGRDGKVNMIDLWM 227 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTC---------------CEEEEEEC--SSCEEEEEECTTSCEEEEEETTSEEEEEETTS
T ss_pred CCceEEEEeCCCCeEEEEECCCC---------------eEEEEEeC--CCCccceEECCCCCEEEEEcCCCeEEEEECCC
Confidence 34457888889999999996433 33555554 3467799999999998888999999999995
Q ss_pred -CCCCCCceeeeeeeeeeecccccceeEEEEc----cCCCCEEEEEeC-CCcEEEEEcCCCC
Q psy14817 82 -PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN----PVVPGMLASCSD-DGDVKLWQIKLEN 137 (138)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~l~~~~~-d~~v~~wd~~~~~ 137 (138)
... ...... .......+.++ |+ ++++++++. ++++.++|..+.+
T Consensus 228 ~t~~---------~v~~i~--~G~~P~~ia~s~~~~pD-Gk~l~v~n~~~~~v~ViD~~t~~ 277 (567)
T 1qks_A 228 KEPT---------TVAEIK--IGSEARSIETSKMEGWE-DKYAIAGAYWPPQYVIMDGETLE 277 (567)
T ss_dssp SSCC---------EEEEEE--CCSEEEEEEECCSTTCT-TTEEEEEEEETTEEEEEETTTCC
T ss_pred CCCc---------EeEEEe--cCCCCceeEEccccCCC-CCEEEEEEccCCeEEEEECCCCc
Confidence 333 112221 12346789999 68 887766664 6999999977654
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=98.90 E-value=2.7e-08 Score=63.63 Aligned_cols=106 Identities=6% Similarity=0.021 Sum_probs=71.8
Q ss_pred CCCeEEEee------CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee-------
Q psy14817 4 TGSRLATCS------DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC------- 70 (138)
Q Consensus 4 ~~~~l~t~s------~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~------- 70 (138)
+++++.... .|+.|.+||.... +.+..+.. +..+ .++++|++++++.+.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~---------------~~~~~i~~-g~~p--~i~~spdg~~lyv~~~~~~~~~ 75 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNG---------------KFLGMVPT-AFNG--HVQVSNDGKKIYTMTTYHERIT 75 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTC---------------CEEEEEEC-CEEE--EEEECTTSSEEEEEEEEETTSS
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCC---------------eEEEEecC-CCCC--ceEECCCCCEEEEEEecccccc
Confidence 566555543 4789999995332 33455555 3444 899999999887775
Q ss_pred ---CCCcEEEEeccCCCCCCceeeeeeeeeeecc-----cccceeEEEEccCCCCEEEEEeC--CCcEEEEEcCCCC
Q psy14817 71 ---GDDAIRIFKENPEAGDSDMVSFDLVHTEHRA-----HNQDVNCVAWNPVVPGMLASCSD--DGDVKLWQIKLEN 137 (138)
Q Consensus 71 ---~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~~~~~--d~~v~~wd~~~~~ 137 (138)
.++.|.+||....+ ........ +......++++|+ +++|++++. ++.|.+||+.+++
T Consensus 76 ~g~~~~~v~v~d~~t~~---------~~~~i~~~~~~~~~g~~p~~i~~spd-g~~l~v~n~~~~~~v~v~d~~~~~ 142 (361)
T 2oiz_A 76 RGKRSDVVEVWDADKLT---------FEKEISLPPKRVQGLNYDGLFRQTTD-GKFIVLQNASPATSIGIVDVAKGD 142 (361)
T ss_dssp SSCEEEEEEEEETTTCC---------EEEEEEECTTBCCBCCCGGGEEECTT-SSEEEEEEESSSEEEEEEETTTTE
T ss_pred cCCCCCEEEEEECcCCc---------EEEEEEcCccccccCCCcceEEECCC-CCEEEEECCCCCCeEEEEECCCCc
Confidence 35679999987654 11111101 2345678999999 998888764 6789999998754
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=98.86 E-value=1.3e-07 Score=58.42 Aligned_cols=101 Identities=7% Similarity=-0.024 Sum_probs=72.0
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCc-cCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG-RTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
..+++|++++.|+.|.+||... .+.+..+.. +. ..+.++.+.|+|.++++ .++.|..||.
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~t---------------G~~~w~~~~-~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~- 63 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDT---------------KEIVWEYPL-EKGWECNSVAATKAGEILFS--YSKGAKMITR- 63 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTT---------------TEEEEEEEC-CTTCCCCEEEECTTSCEEEE--CBSEEEEECT-
T ss_pred CCCcEEEeeCCCCEEEEEECCC---------------CeEEEEeCC-CccCCCcCeEECCCCCEEEe--CCCCEEEECC-
Confidence 3578999999999999999533 255666666 33 46889999999998883 4677999988
Q ss_pred CCCCCCceeeeeeeeeeecc-cccceeEEEEccCCCCEEEEEeC-CCcEEEEEc
Q psy14817 82 PEAGDSDMVSFDLVHTEHRA-HNQDVNCVAWNPVVPGMLASCSD-DGDVKLWQI 133 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~-d~~v~~wd~ 133 (138)
.++ ..-.... ....+..+.+.++ ++++++.+. ++.+..+|.
T Consensus 64 ~G~----------~~W~~~~~~~~~~~~~~~~~d-G~~lv~~~~~~~~v~~vd~ 106 (276)
T 3no2_A 64 DGR----------ELWNIAAPAGCEMQTARILPD-GNALVAWCGHPSTILEVNM 106 (276)
T ss_dssp TSC----------EEEEEECCTTCEEEEEEECTT-SCEEEEEESTTEEEEEECT
T ss_pred CCC----------EEEEEcCCCCccccccEECCC-CCEEEEecCCCCEEEEEeC
Confidence 444 1111112 2246778888898 898888776 666766665
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=98.83 E-value=2.5e-07 Score=59.23 Aligned_cols=66 Identities=6% Similarity=0.136 Sum_probs=49.6
Q ss_pred EEEecCCCeEEEeeC-----------CCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC
Q psy14817 57 ISWCHLTDLIATACG-----------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD 125 (138)
Q Consensus 57 v~~~~~~~~~~s~~~-----------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 125 (138)
++++|++..++.+.. ...|.+||+...+ .......+. +..++|+|+ +++|++++.
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~----------~v~~i~~~~--p~~ia~spd-g~~l~v~n~- 324 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ----------RVARIPGRD--ALSMTIDQQ-RNLMLTLDG- 324 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE----------EEEEEECTT--CCEEEEETT-TTEEEEECS-
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc----------EEEEEecCC--eeEEEECCC-CCEEEEeCC-
Confidence 678999886555432 3479999988765 222222333 899999999 888888886
Q ss_pred CcEEEEEcCCC
Q psy14817 126 GDVKLWQIKLE 136 (138)
Q Consensus 126 ~~v~~wd~~~~ 136 (138)
+.|.+||..++
T Consensus 325 ~~v~v~D~~t~ 335 (361)
T 2oiz_A 325 GNVNVYDISQP 335 (361)
T ss_dssp SCEEEEECSSS
T ss_pred CeEEEEECCCC
Confidence 99999999887
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=98.80 E-value=5.3e-08 Score=62.86 Aligned_cols=112 Identities=6% Similarity=-0.020 Sum_probs=71.6
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
++...++++|+.+ .+.+|++........ .... . .++..... +.. |+.++| ++.+++.+ .++.|++||+.
T Consensus 46 s~~~gll~a~~~~-~l~v~~~~~l~~~~~-~~~~-~--~~~~~~~~--lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~ 114 (388)
T 1xip_A 46 SNSKSLFVAASGS-KAVVGELQLLRDHIT-SDST-P--LTFKWEKE--IPD-VIFVCF--HGDQVLVS-TRNALYSLDLE 114 (388)
T ss_dssp ETTTTEEEEEETT-EEEEEEHHHHHHHHH-SSSC-C--CCCSEEEE--CTT-EEEEEE--ETTEEEEE-ESSEEEEEESS
T ss_pred cCCCCEEEEeCCC-EEEEEEhhHhhhhhc-cccc-c--ccceEEee--CCC-eeEEEE--CCCEEEEE-cCCcEEEEEch
Confidence 5678889999987 555598643220000 0000 0 11112222 345 999999 88888888 88999999998
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
... .......+...+..+.+.+. .++.++.||.|.+||+..+.
T Consensus 115 sl~----------~~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~ 157 (388)
T 1xip_A 115 ELS----------EFRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKS 157 (388)
T ss_dssp STT----------CEEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCC
T ss_pred hhh----------ccCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCCc
Confidence 654 11112244556777776654 38889999999999998653
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=98.77 E-value=2.4e-07 Score=58.47 Aligned_cols=92 Identities=11% Similarity=0.146 Sum_probs=59.5
Q ss_pred CccCCCeEEEeeCC---Cc--EEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCC---
Q psy14817 1 MIQTGSRLATCSDD---AT--VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD--- 72 (138)
Q Consensus 1 ~s~~~~~l~t~s~d---~~--v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d--- 72 (138)
|||+|++||.++.+ +. |.+|++... +...... +.. +..+.|+|++..|+.++.+
T Consensus 66 ~SpDg~~la~~~~~~~~~~~~l~~~~~~~g---------------~~~~l~~--~~~-~~~~~wspdg~~l~~~~~~~~~ 127 (347)
T 2gop_A 66 ISPDGKKIAFMRANEEKKVSEIWVADLETL---------------SSKKILE--AKN-IRSLEWNEDSRKLLIVGFKRRE 127 (347)
T ss_dssp ECTTSSEEEEEEEETTTTEEEEEEEETTTT---------------EEEEEEE--ESE-EEEEEECTTSSEEEEEEECCCC
T ss_pred ECCCCCEEEEEEeccCCCcceEEEEECCCC---------------ceEEEEc--CCC-ccceeECCCCCEEEEEEccCCC
Confidence 68999999988754 34 666665321 2222222 233 8999999999977766532
Q ss_pred ------------------------CcEEEEeccCCCCCCceeeeeee-eeeecccccceeEEEEccCCCCEEEEEeCC
Q psy14817 73 ------------------------DAIRIFKENPEAGDSDMVSFDLV-HTEHRAHNQDVNCVAWNPVVPGMLASCSDD 125 (138)
Q Consensus 73 ------------------------~~i~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 125 (138)
..|.+|++..+. . .... . . .+..+.|+|+ + ++++++.+
T Consensus 128 ~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~----------~~~~l~-~-~-~~~~~~~spd-g-~~~~~~~~ 190 (347)
T 2gop_A 128 DEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE----------VIEEFE-K-P-RFSSGIWHRD-K-IVVNVPHR 190 (347)
T ss_dssp ---------CCCC---------CEEEEEEEETTTTE----------EEEEEE-E-E-TTCEEEEETT-E-EEEEEECC
T ss_pred cCCcEEEcccceeecCcccccCccceEEEEECCCCe----------EEeeec-C-C-CcccccCCCC-e-EEEEEecc
Confidence 468888887654 2 1222 2 2 6788999999 7 77777654
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=98.76 E-value=4.8e-07 Score=55.09 Aligned_cols=108 Identities=5% Similarity=-0.107 Sum_probs=73.7
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
.++|+++++...++.|.+|+...... ...... ....+.++++++++.++++...++.|.+|+..
T Consensus 116 ~~~g~l~v~~~~~~~i~~~~~~~~~~---------------~~~~~~-~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 179 (270)
T 1rwi_B 116 DTQGAVYVADRGNNRVVKLAAGSKTQ---------------TVLPFT-GLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAE 179 (270)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTCCSC---------------EECCCC-SCCSCCCEEECTTCCEEEEEGGGTEEEEECTT
T ss_pred CCCCCEEEEECCCCEEEEEECCCcee---------------Eeeccc-cCCCceeEEEeCCCCEEEEECCCCEEEEEecC
Confidence 56888888877888999997422111 111111 23456789999999877777777889999987
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
... ...........+..+++.++ +.++++...++.|.+|+....
T Consensus 180 ~~~----------~~~~~~~~~~~p~~i~~d~~-g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 180 SNN----------QVVLPFTDITAPWGIAVDEA-GTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp TCC----------EEECCCSSCCSEEEEEECTT-CCEEEEETTTSCEEEECTTCS
T ss_pred CCc----------eEeecccCCCCceEEEECCC-CCEEEEECCCCcEEEEcCCCC
Confidence 543 11111123356789999998 777777777889999998654
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.74 E-value=5.4e-07 Score=62.23 Aligned_cols=111 Identities=5% Similarity=-0.194 Sum_probs=69.2
Q ss_pred CccCCCeEEEeeCCCc-------------EEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEE
Q psy14817 1 MIQTGSRLATCSDDAT-------------VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA 67 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~-------------v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~ 67 (138)
|+|||+.|+.++.|.. |++|++...... ...+..... +...+..+.|+|+|++++
T Consensus 175 wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~-----------~~lv~~~~~-~~~~~~~~~~SpDG~~l~ 242 (695)
T 2bkl_A 175 WTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSK-----------DTVVHERTG-DPTTFLQSDLSRDGKYLF 242 (695)
T ss_dssp ECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGG-----------CEEEECCCC-CTTCEEEEEECTTSCCEE
T ss_pred EecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchh-----------ceEEEecCC-CCEEEEEEEECCCCCEEE
Confidence 6899999999998876 999997544321 123444333 456788999999999777
Q ss_pred EeeCCC----cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe---CCCcEEEEEcCCC
Q psy14817 68 TACGDD----AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS---DDGDVKLWQIKLE 136 (138)
Q Consensus 68 s~~~d~----~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---~d~~v~~wd~~~~ 136 (138)
..+.++ .|.+++...+. ...+. .+...+....+ ++ +.+++... .++.|.+||+.++
T Consensus 243 ~~~~~~~~~~~l~~~~~~~~~----------~~~l~-~~~~~~~~~~~-~~-g~l~~~s~~~~~~~~l~~~d~~~~ 305 (695)
T 2bkl_A 243 VYILRGWSENDVYWKRPGEKD----------FRLLV-KGVGAKYEVHA-WK-DRFYVLTDEGAPRQRVFEVDPAKP 305 (695)
T ss_dssp EEEEETTTEEEEEEECTTCSS----------CEEEE-ECSSCCEEEEE-ET-TEEEEEECTTCTTCEEEEEBTTBC
T ss_pred EEEeCCCCceEEEEEcCCCCc----------eEEee-cCCCceEEEEe-cC-CcEEEEECCCCCCCEEEEEeCCCC
Confidence 666554 46666443222 11111 33334455555 45 44555554 2578999998664
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.74 E-value=2e-08 Score=64.28 Aligned_cols=68 Identities=9% Similarity=-0.002 Sum_probs=45.2
Q ss_pred CccCCCeEEEeeCC---CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEE
Q psy14817 1 MIQTGSRLATCSDD---ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s~d---~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i 77 (138)
|||+|++|+..+.+ ..|.+|++... +. ..+...+......+.|+|+++.|+.++.++.|++
T Consensus 43 ~SpdG~~l~~~~~~~g~~~l~~~d~~~~---------------~~-~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~ 106 (396)
T 3c5m_A 43 FTQDGKKLLFAGDFDGNRNYYLLNLETQ---------------QA-VQLTEGKGDNTFGGFISTDERAFFYVKNELNLMK 106 (396)
T ss_dssp BCTTSCEEEEEECTTSSCEEEEEETTTT---------------EE-EECCCSSCBCTTTCEECTTSSEEEEEETTTEEEE
T ss_pred CCCCCCEEEEEEecCCCceEEEEECCCC---------------cE-EEeecCCCCccccceECCCCCEEEEEEcCCcEEE
Confidence 68999998876543 36777775332 11 2222212222334789999999988888889999
Q ss_pred EeccCCC
Q psy14817 78 FKENPEA 84 (138)
Q Consensus 78 ~~~~~~~ 84 (138)
|++..+.
T Consensus 107 ~d~~~~~ 113 (396)
T 3c5m_A 107 VDLETLE 113 (396)
T ss_dssp EETTTCC
T ss_pred EECCCCC
Confidence 9988654
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=98.74 E-value=4.5e-07 Score=57.23 Aligned_cols=109 Identities=8% Similarity=-0.051 Sum_probs=72.7
Q ss_pred CccCCCeEEEeeCC----------CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee
Q psy14817 1 MIQTGSRLATCSDD----------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 70 (138)
Q Consensus 1 ~s~~~~~l~t~s~d----------~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~ 70 (138)
++|+|++++++..+ +.|.++|.... +....+..........++++|++..+..+.
T Consensus 179 ~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~---------------~v~~~~~~~~g~~p~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 179 MDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETF---------------TVEKQFKFKLGDWPSEVQLNGTRDTLYWIN 243 (328)
T ss_dssp ECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTT---------------EEEEEEECCTTCCCEEEEECTTSCEEEEES
T ss_pred EcCCCCEEEEECCCccCCccccCCceEEEEECCCC---------------eEEEEEecCCCCCceeEEEecCCCEEEEEc
Confidence 36788888887665 78999996332 233333321134678999999999777665
Q ss_pred CCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEE----eCCCcEEEEEcC
Q psy14817 71 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC----SDDGDVKLWQIK 134 (138)
Q Consensus 71 ~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~----~~d~~v~~wd~~ 134 (138)
. .|.+||...+... ..............++++|+++.++++. ..++.|.+||..
T Consensus 244 ~--~v~~~d~~t~~~~--------~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 244 N--DIWRMPVEADRVP--------VRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp S--SEEEEETTCSSCC--------SSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred c--EEEEEECCCCcee--------eeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 4 8999998765510 0011111145788999999646777776 678899999987
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=98.73 E-value=8.3e-08 Score=66.68 Aligned_cols=111 Identities=11% Similarity=0.028 Sum_probs=69.0
Q ss_pred CccCCCeEEEeeCC-----CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCc-
Q psy14817 1 MIQTGSRLATCSDD-----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDA- 74 (138)
Q Consensus 1 ~s~~~~~l~t~s~d-----~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~- 74 (138)
|||||++||.++.+ ..|++||+..... +.. .. +...+..+.|+|+ +.|+.+..++.
T Consensus 170 ~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~---------------~~~-~~-~~~~~~~~~wspD-~~l~~~~~~~~~ 231 (741)
T 1yr2_A 170 ASDDGRLLAYSVQDGGSDWRTVKFVGVADGKP---------------LAD-EL-KWVKFSGLAWLGN-DALLYSRFAEPK 231 (741)
T ss_dssp ECTTSSEEEEEEEETTCSEEEEEEEETTTCCE---------------EEE-EE-EEEESCCCEESTT-SEEEEEECCCC-
T ss_pred ECCCCCEEEEEEcCCCCceEEEEEEECCCCCC---------------CCc-cC-CCceeccEEEECC-CEEEEEEecCcc
Confidence 68999999877654 4699999754321 111 11 1122357889999 87776665543
Q ss_pred -------------EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCC-----cEEEEEcCCC
Q psy14817 75 -------------IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG-----DVKLWQIKLE 136 (138)
Q Consensus 75 -------------i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-----~v~~wd~~~~ 136 (138)
|++|++.... ... ........+...+..+.|+|+ +++|+..+.++ .|.+||+.++
T Consensus 232 ~~~~~~~~~~~~~v~~~~lgt~~---~~~---~lv~~~~~~~~~~~~~~~SpD-G~~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 232 EGQAFQALNYNQTVWLHRLGTPQ---SAD---QPVFATPELPKRGHGASVSSD-GRWVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp -------CCCCCEEEEEETTSCG---GGC---EEEECCTTCTTCEEEEEECTT-SCEEEEEEECTTCSCCEEEEEEEETT
T ss_pred cccccccCCCCCEEEEEECCCCc---hhC---EEEeccCCCCeEEEEEEECCC-CCEEEEEEEccCCCcceEEEEECCCC
Confidence 7888876443 000 011111123335788999999 88887776543 7999998665
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=98.72 E-value=1e-06 Score=54.53 Aligned_cols=108 Identities=8% Similarity=0.029 Sum_probs=70.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCce-EEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW-KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|+++.+++.+.++.|.+|++..... . .....+.. +...+.+++++++|.++++. ++.|.+|+
T Consensus 179 ~s~dg~~lv~~~~~~~i~~~~~~~~g~------------~~~~~~~~~~-~~~~p~~i~~d~~G~l~v~~--~~~v~~~~ 243 (296)
T 3e5z_A 179 FLPSGNLLVSDTGDNATHRYCLNARGE------------TEYQGVHFTV-EPGKTDGLRVDAGGLIWASA--GDGVHVLT 243 (296)
T ss_dssp ECTTSCEEEEETTTTEEEEEEECSSSC------------EEEEEEEECC-SSSCCCSEEEBTTSCEEEEE--TTEEEEEC
T ss_pred ECCCCCEEEEeCCCCeEEEEEECCCCc------------CcCCCeEeeC-CCCCCCeEEECCCCCEEEEc--CCeEEEEC
Confidence 578999888888899999999752111 0 00122222 44566789999999866665 77899999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEE-ccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW-NPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.. +. .......+.. +.+++| .|+ ++.|..++.++ +.-++.+++.
T Consensus 244 ~~-g~----------~~~~~~~~~~-~~~~~f~~~d-~~~L~v~t~~~-l~~~~~~~~~ 288 (296)
T 3e5z_A 244 PD-GD----------ELGRVLTPQT-TSNLCFGGPE-GRTLYMTVSTE-FWSIETNVRG 288 (296)
T ss_dssp TT-SC----------EEEEEECSSC-CCEEEEESTT-SCEEEEEETTE-EEEEECSCCB
T ss_pred CC-CC----------EEEEEECCCC-ceeEEEECCC-CCEEEEEcCCe-EEEEEccccc
Confidence 86 33 2222223444 889999 477 78888777764 5555666554
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=1.1e-06 Score=60.80 Aligned_cols=113 Identities=1% Similarity=-0.208 Sum_probs=70.8
Q ss_pred CccCCCeEEEeeCCCc----------------EEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC
Q psy14817 1 MIQTGSRLATCSDDAT----------------VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~----------------v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~ 64 (138)
|||||+.|+.++.++. |++|++...... -..+..... +...+..+.|+|+|+
T Consensus 178 wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~-----------~~~v~~~~~-~~~~~~~~~~SpDg~ 245 (710)
T 2xdw_A 178 WTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSE-----------DILCAEFPD-EPKWMGGAELSDDGR 245 (710)
T ss_dssp ECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGG-----------CEEEECCTT-CTTCEEEEEECTTSC
T ss_pred EEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCccc-----------ceEEeccCC-CCeEEEEEEEcCCCC
Confidence 6899999999988876 999997543210 022333222 455678999999999
Q ss_pred eEEEeeC-----CCcEEEEeccC------CCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-C---CcEE
Q psy14817 65 LIATACG-----DDAIRIFKENP------EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-D---GDVK 129 (138)
Q Consensus 65 ~~~s~~~-----d~~i~i~~~~~------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d---~~v~ 129 (138)
+++..+. +..|++||+.. +.. . ...+ ..+...+.. .|+|+ +..|+..+. + +.|.
T Consensus 246 ~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~--~------~~~l-~~~~~~~~~-~~s~d-g~~l~~~s~~~~~~~~l~ 314 (710)
T 2xdw_A 246 YVLLSIREGCDPVNRLWYCDLQQESNGITGIL--K------WVKL-IDNFEGEYD-YVTNE-GTVFTFKTNRHSPNYRLI 314 (710)
T ss_dssp EEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC--C------CEEE-ECSSSSCEE-EEEEE-TTEEEEEECTTCTTCEEE
T ss_pred EEEEEEEccCCCccEEEEEECcccccccCCcc--c------eEEe-eCCCCcEEE-EEecc-CCEEEEEECCCCCCCEEE
Confidence 7776654 56799999875 210 0 1111 233333333 47788 666655543 2 3589
Q ss_pred EEEcCCC
Q psy14817 130 LWQIKLE 136 (138)
Q Consensus 130 ~wd~~~~ 136 (138)
+||+.++
T Consensus 315 ~~d~~~~ 321 (710)
T 2xdw_A 315 NIDFTDP 321 (710)
T ss_dssp EEETTSC
T ss_pred EEeCCCC
Confidence 9998764
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.68 E-value=5.9e-07 Score=57.44 Aligned_cols=102 Identities=14% Similarity=0.082 Sum_probs=62.2
Q ss_pred CccCCCeEEEeeCC-----CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEec-CCCeEEEee----
Q psy14817 1 MIQTGSRLATCSDD-----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATAC---- 70 (138)
Q Consensus 1 ~s~~~~~l~t~s~d-----~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~s~~---- 70 (138)
|+|+|++|+.++.+ +.|.+||+..... ..+..+.+ .. +.|+| ++.+++.++
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-------------~~l~~~~~-----~~-~~~s~~dg~~l~~~~~~~p 305 (396)
T 3c5m_A 245 WIPDGSAMAYVSYFKGQTDRVIYKANPETLEN-------------EEVMVMPP-----CS-HLMSNFDGSLMVGDGCDAP 305 (396)
T ss_dssp ECTTSSCEEEEEEETTTCCEEEEEECTTTCCE-------------EEEEECCS-----EE-EEEECSSSSEEEEEECCC-
T ss_pred ECCCCCEEEEEecCCCCccceEEEEECCCCCe-------------EEeeeCCC-----CC-CCccCCCCceEEEecCCcc
Confidence 68999988777654 4499999743211 22222222 22 88999 999777654
Q ss_pred ------------CCCcEEEEeccCCCCCCceeeeeeeeeeeccccc-----------ceeEEEEccCCCCEEEEEeC-CC
Q psy14817 71 ------------GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ-----------DVNCVAWNPVVPGMLASCSD-DG 126 (138)
Q Consensus 71 ------------~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~~l~~~~~-d~ 126 (138)
.+..|.+||+..+. ...+ ..+.. .+..+.|+|+ +..|+.++. ++
T Consensus 306 ~~~~~~~~~~~~~~~~i~~~d~~~~~----------~~~l-~~~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~~~s~~~~ 373 (396)
T 3c5m_A 306 VDVADADSYNIENDPFLYVLNTKAKS----------AQKL-CKHSTSWDVLDGDRQITHPHPSFTPN-DDGVLFTSDFEG 373 (396)
T ss_dssp ---------CCCCCCEEEEEETTTTB----------CCEE-EECCCCCCCBTTBSSTTCCCCEECTT-SSEEEEEECTTS
T ss_pred eeeccccccccCCCCcEEEEecccCc----------eEEc-cCCCCccccccccccCCCCCceEccC-CCeEEEEecCCC
Confidence 24679999987654 1111 12222 2566789999 877766654 55
Q ss_pred cEEEEEc
Q psy14817 127 DVKLWQI 133 (138)
Q Consensus 127 ~v~~wd~ 133 (138)
...+|.+
T Consensus 374 ~~~l~~~ 380 (396)
T 3c5m_A 374 VPAIYIA 380 (396)
T ss_dssp SCEEEEE
T ss_pred CceEEEE
Confidence 5555543
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=98.67 E-value=1.3e-06 Score=54.30 Aligned_cols=112 Identities=9% Similarity=0.113 Sum_probs=72.5
Q ss_pred cCCCe-EEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCc-cCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 3 QTGSR-LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG-RTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 3 ~~~~~-l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+++. +++...++.|.+|+...... .........+.. +. ..+..++++++|.++++...++.|.+|+.
T Consensus 185 ~dg~~l~v~~~~~~~i~~~~~~~~g~---------~~~~~~~~~~~~-~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~ 254 (314)
T 1pjx_A 185 GRPYQLIVAETPTKKLWSYDIKGPAK---------IENKKVWGHIPG-THEGGADGMDFDEDNNLLVANWGSSHIEVFGP 254 (314)
T ss_dssp SCEEEEEEEETTTTEEEEEEEEETTE---------EEEEEEEEECCC-CSSCEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred CCCCEEEEEECCCCeEEEEECCCCCc---------cccceEEEECCC-CCCCCCCceEECCCCCEEEEEcCCCEEEEEcC
Confidence 77754 45556788999999642110 001112333333 33 56788999999998888777889999998
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCC-EEEEEeCCCcEEEEEcCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~d~~v~~wd~~~ 135 (138)
..+. .......+...+.++++.|+ ++ ++++...++.|..|++..
T Consensus 255 ~~g~----------~~~~~~~~~~~~~~i~~~~d-g~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 255 DGGQ----------PKMRIRCPFEKPSNLHFKPQ-TKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TCBS----------CSEEEECSSSCEEEEEECTT-SSEEEEEETTTTEEEEEECSS
T ss_pred CCCc----------EeEEEeCCCCCceeEEECCC-CCEEEEEeCCCCeEEEEeCCC
Confidence 7443 11111233467899999998 77 445555678899998764
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=98.64 E-value=1.1e-06 Score=54.35 Aligned_cols=96 Identities=13% Similarity=0.034 Sum_probs=65.9
Q ss_pred CccCCC-eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~-~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|+|+ +++++..++.|..|+.... ...+.. +...+.++++++++.++++...++.|.+|+
T Consensus 35 ~d~~g~~l~~~~~~~~~i~~~~~~~~-----------------~~~~~~-~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 35 YVPARSAVIFSDVRQNRTWAWSDDGQ-----------------LSPEMH-PSHHQNGHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp EEGGGTEEEEEEGGGTEEEEEETTSC-----------------EEEEES-SCSSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred EeCCCCEEEEEeCCCCEEEEEECCCC-----------------eEEEEC-CCCCcceeeECCCCcEEEEecCCCeEEEEc
Confidence 568888 7888999999999996322 233334 566789999999999887776778899999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEE
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLAS 121 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 121 (138)
...+. .. . ............+..+++.|+ ++++++
T Consensus 97 ~~~g~---~~-~--~~~~~~~~~~~~~~~i~~d~~-G~l~vt 131 (296)
T 3e5z_A 97 EPGGE---WE-S--IADSFEGKKLNSPNDVCLAPD-GSLWFS 131 (296)
T ss_dssp STTCC---EE-E--EECEETTEECCCCCCEEECTT-SCEEEE
T ss_pred CCCCc---EE-E--EeeccCCCCCCCCCCEEECCC-CCEEEE
Confidence 86554 00 0 000000111235678999998 888887
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=98.63 E-value=1.3e-06 Score=56.42 Aligned_cols=108 Identities=9% Similarity=-0.048 Sum_probs=74.3
Q ss_pred ccCCCeEEEeeC-----CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee------
Q psy14817 2 IQTGSRLATCSD-----DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC------ 70 (138)
Q Consensus 2 s~~~~~l~t~s~-----d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~------ 70 (138)
.|+++.+..... ++.|.+.|... .+.+..+.. ...+ . +.++|++++++.+.
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t---------------~~v~~~I~v-G~~P-~-va~spDG~~lyVan~~~~r~ 102 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDGEA---------------GRVIGMIDG-GFLP-N-PVVADDGSFIAHASTVFSRI 102 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTT---------------TEEEEEEEE-CSSC-E-EEECTTSSCEEEEEEEEEET
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEECCC---------------CeEEEEEEC-CCCC-c-EEECCCCCEEEEEccccccc
Confidence 578877766654 67999999533 255666654 3344 4 99999999665554
Q ss_pred ----CCCcEEEEeccCCCCCCceeeeeeeeeeeccc------ccceeEEEEccCCCCEEEEEeC--CCcEEEEEcCCCC
Q psy14817 71 ----GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH------NQDVNCVAWNPVVPGMLASCSD--DGDVKLWQIKLEN 137 (138)
Q Consensus 71 ----~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~~~~~--d~~v~~wd~~~~~ 137 (138)
.++.|.+||..... ....+..+. ......+.++|+ +++++.++. ++.|.++|+.+++
T Consensus 103 ~~G~~~~~VsviD~~t~~---------v~~~I~v~~g~r~~~g~~P~~~a~spD-Gk~lyVan~~~~~~VsVID~~t~~ 171 (386)
T 3sjl_D 103 ARGERTDYVEVFDPVTLL---------PTADIELPDAPRFLVGTYPWMTSLTPD-GKTLLFYQFSPAPAVGVVDLEGKA 171 (386)
T ss_dssp TEEEEEEEEEEECTTTCC---------EEEEEEETTCCCCCBSCCGGGEEECTT-SSEEEEEECSSSCEEEEEETTTTE
T ss_pred ccCCCCCEEEEEECCCCe---------EEEEEECCCccccccCCCCceEEEcCC-CCEEEEEEcCCCCeEEEEECCCCc
Confidence 35689999998765 122111111 225677999999 888887764 6889999998765
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=98.62 E-value=1.3e-06 Score=54.03 Aligned_cols=109 Identities=11% Similarity=0.055 Sum_probs=71.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC-CCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-DDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~-d~~i~i~~ 79 (138)
++|+|++++ +.++.|..||. .. +.+..+.......+.++.+.++|..+++.+. ++.+..++
T Consensus 44 ~~pdG~ilv--s~~~~V~~~d~-~G---------------~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd 105 (276)
T 3no2_A 44 ATKAGEILF--SYSKGAKMITR-DG---------------RELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVN 105 (276)
T ss_dssp ECTTSCEEE--ECBSEEEEECT-TS---------------CEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEEC
T ss_pred ECCCCCEEE--eCCCCEEEECC-CC---------------CEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEe
Confidence 368899888 34778888885 22 3355555422346788999999999888877 66777776
Q ss_pred ccCCCCCCceeeeeeeee-eecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 80 ENPEAGDSDMVSFDLVHT-EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
.. ++ ..+..... ....+......++..++ ++++++...++.|..||..
T Consensus 106 ~~-Gk-----~l~~~~~~~~~~~~~~~~~~v~~~~~-G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 106 MK-GE-----VLSKTEFETGIERPHAQFRQINKNKK-GNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp TT-SC-----EEEEEEECCSCSSGGGSCSCCEECTT-SCEEEEETTTTEEEEECTT
T ss_pred CC-CC-----EEEEEeccCCCCcccccccCceECCC-CCEEEEecCCCEEEEECCC
Confidence 53 22 11111110 00112234556677888 9999999999999999987
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=6.2e-06 Score=55.95 Aligned_cols=115 Identities=11% Similarity=0.057 Sum_probs=73.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEe----cCCCeEEEee-CCCcE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC----HLTDLIATAC-GDDAI 75 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~----~~~~~~~s~~-~d~~i 75 (138)
|||+|+++.+++.|+.|.+||+... ..+.+..+.. ......+.++ |+|++++.++ .++.+
T Consensus 204 ~SpDGr~lyv~~~dg~V~viD~~~~-------------t~~~v~~i~~--G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v 268 (567)
T 1qks_A 204 LSASGRYLFVIGRDGKVNMIDLWMK-------------EPTTVAEIKI--GSEARSIETSKMEGWEDKYAIAGAYWPPQY 268 (567)
T ss_dssp ECTTSCEEEEEETTSEEEEEETTSS-------------SCCEEEEEEC--CSEEEEEEECCSTTCTTTEEEEEEEETTEE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCC-------------CCcEeEEEec--CCCCceeEEccccCCCCCEEEEEEccCCeE
Confidence 5899999999999999999997311 1133455544 2346789999 6999766655 45889
Q ss_pred EEEeccCCCCCCceeeeeeeeeee--c---cc-ccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEH--R---AH-NQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~--~---~~-~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
.++|....+ ........-. . .| ...+..+..+++...+++....+|.|.++|...
T Consensus 269 ~ViD~~t~~-----~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~ 329 (567)
T 1qks_A 269 VIMDGETLE-----PKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTD 329 (567)
T ss_dssp EEEETTTCC-----EEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTC
T ss_pred EEEECCCCc-----EEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCC
Confidence 999977654 1110000000 0 01 125677777877445566666678888888654
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=98.55 E-value=4.5e-06 Score=52.59 Aligned_cols=98 Identities=7% Similarity=0.013 Sum_probs=65.3
Q ss_pred ccCCCeEEEeeCCC--------cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEE-EEEecCCCeEEEeeCC
Q psy14817 2 IQTGSRLATCSDDA--------TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYD-ISWCHLTDLIATACGD 72 (138)
Q Consensus 2 s~~~~~l~t~s~d~--------~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-v~~~~~~~~~~s~~~d 72 (138)
||+|++|+.++.+. .|.+|| .. . ...+...+...+.. +.|+ ++ ++++++.+
T Consensus 223 spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~-~---------------~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~ 282 (347)
T 2gop_A 223 DSDGERILLYGKPEKKYMSEHNKLYIYD--GK-E---------------VMGILDEVDRGVGQAKIKD-GK-VYFTLFEE 282 (347)
T ss_dssp EECSSCEEEEECCSSSCCCSSCEEEEEC--SS-C---------------EEESSTTCCSEEEEEEEET-TE-EEEEEEET
T ss_pred CCCCCEEEEEEccccCCccccceEEEEC--CC-c---------------eEeccccCCcccCCccEEc-Cc-EEEEEecC
Confidence 68999888777543 566666 11 1 12233224567775 8999 88 88999999
Q ss_pred CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcE-EEEEcC
Q psy14817 73 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV-KLWQIK 134 (138)
Q Consensus 73 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v-~~wd~~ 134 (138)
+.+++| +..+. ..... .+...|..+.|+| .++++++.++.. .+|.+.
T Consensus 283 ~~~~l~-~~~g~----------~~~~~-~~~~~v~~~~~s~---~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 283 GSVNLY-IWDGE----------IKPIA-KGRHWIMGFDVDE---IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp TEEEEE-EESSS----------EEEEE-CSSSEEEEEEESS---SEEEEEECSSSCCEEEEES
T ss_pred CcEEEE-EcCCc----------eEEEe-cCCCeEEeeeeeC---cEEEEEcCCCChHHheEeC
Confidence 999999 87322 12222 3466788999987 577777776665 777664
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=98.50 E-value=6.5e-06 Score=51.95 Aligned_cols=104 Identities=10% Similarity=-0.006 Sum_probs=68.1
Q ss_pred CCeEEEee-CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCC----------C
Q psy14817 5 GSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD----------D 73 (138)
Q Consensus 5 ~~~l~t~s-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d----------~ 73 (138)
++.+++.. .++.|.++|.... +.+..+.. ......+.+++++.+++++..+ +
T Consensus 141 ~~lyv~~~~~~~~v~viD~~t~---------------~~~~~i~~--g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~ 203 (328)
T 3dsm_A 141 KYVYVNCWSYQNRILKIDTETD---------------KVVDELTI--GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAP 203 (328)
T ss_dssp TEEEEEECTTCCEEEEEETTTT---------------EEEEEEEC--SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCC
T ss_pred CEEEEEcCCCCCEEEEEECCCC---------------eEEEEEEc--CCCccceEEcCCCCEEEEECCCccCCccccCCc
Confidence 34455444 4889999996432 33444433 2345678899999877776554 6
Q ss_pred cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 74 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 74 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.|.++|..... ...............++++|+ +..+..+.. .|.+||..+++
T Consensus 204 ~v~~id~~t~~---------v~~~~~~~~g~~p~~la~~~d-~~~lyv~~~--~v~~~d~~t~~ 255 (328)
T 3dsm_A 204 SLYRIDAETFT---------VEKQFKFKLGDWPSEVQLNGT-RDTLYWINN--DIWRMPVEADR 255 (328)
T ss_dssp EEEEEETTTTE---------EEEEEECCTTCCCEEEEECTT-SCEEEEESS--SEEEEETTCSS
T ss_pred eEEEEECCCCe---------EEEEEecCCCCCceeEEEecC-CCEEEEEcc--EEEEEECCCCc
Confidence 89999987654 111111122346889999998 777776654 89999987765
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=98.49 E-value=1.7e-05 Score=49.24 Aligned_cols=82 Identities=10% Similarity=0.107 Sum_probs=53.9
Q ss_pred cCeEEEEEecCCCeE-EEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEE
Q psy14817 52 RTIYDISWCHLTDLI-ATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKL 130 (138)
Q Consensus 52 ~~v~~v~~~~~~~~~-~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~ 130 (138)
...+.++|+|++..+ ++.+.++.|.+|++....+. ................+..+++.++ +++.++...++.|..
T Consensus 149 ~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~---~~~~~~~~~~~~~~~~p~g~~~d~~-G~lwva~~~~~~v~~ 224 (297)
T 3g4e_A 149 DISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQ---ISNRRSVYKLEKEEQIPDGMCIDAE-GKLWVACYNGGRVIR 224 (297)
T ss_dssp SBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCC---EEEEEEEEECCGGGCEEEEEEEBTT-SCEEEEEETTTEEEE
T ss_pred ccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCc---ccCcEEEEECCCCCCCCCeeEECCC-CCEEEEEcCCCEEEE
Confidence 456889999999854 55566788999988522211 1000011111123356788999998 888888777888999
Q ss_pred EEcCCCC
Q psy14817 131 WQIKLEN 137 (138)
Q Consensus 131 wd~~~~~ 137 (138)
||..+++
T Consensus 225 ~d~~tG~ 231 (297)
T 3g4e_A 225 LDPVTGK 231 (297)
T ss_dssp ECTTTCC
T ss_pred EcCCCce
Confidence 9987654
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=98.48 E-value=2.1e-05 Score=50.66 Aligned_cols=107 Identities=12% Similarity=-0.073 Sum_probs=69.6
Q ss_pred ccCCCeEEEeeC--CC---cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee------
Q psy14817 2 IQTGSRLATCSD--DA---TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC------ 70 (138)
Q Consensus 2 s~~~~~l~t~s~--d~---~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~------ 70 (138)
+|+++++..... .. .|.++|.... +.+..+.. ...+ .+.++|++++++.+.
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~---------------~~~~~i~~-g~~p--~i~~spDg~~lyv~n~~~~~~ 90 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGSG---------------SILGHVNG-GFLP--NPVAAHSGSEFALASTSFSRI 90 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCCC---------------eEEEEecC-CCCC--CeEECCCCCEEEEEecccccc
Confidence 356776665543 22 7889996332 34556654 2333 899999999777765
Q ss_pred ----CCCcEEEEeccCCCCCCceeeeeeeeeeecc------cccceeEEEEccCCCCEEEEEeC--CCcEEEEEcCCCC
Q psy14817 71 ----GDDAIRIFKENPEAGDSDMVSFDLVHTEHRA------HNQDVNCVAWNPVVPGMLASCSD--DGDVKLWQIKLEN 137 (138)
Q Consensus 71 ----~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~l~~~~~--d~~v~~wd~~~~~ 137 (138)
.++.|.++|....+ ........ .......+.++|+ +++|+.++. +..|.++| .+++
T Consensus 91 ~rg~~~~~v~viD~~t~~---------~~~~i~~~~~~~~~~g~~p~~~~~spD-G~~l~v~n~~~~~~v~viD-~t~~ 158 (373)
T 2mad_H 91 AKGKRTDYVEVFDPVTFL---------PIADIELPDAPRFDVGPYSWMNANTPN-NADLLFFQFAAGPAVGLVV-QGGS 158 (373)
T ss_pred ccCCCCCeEEEEECCCCc---------EEEEEECCCccccccCCCccceEECCC-CCEEEEEecCCCCeEEEEE-CCCC
Confidence 35789999997654 11111101 1123567899999 998888774 47899999 8765
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=1.4e-05 Score=49.08 Aligned_cols=105 Identities=10% Similarity=0.010 Sum_probs=70.6
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
.++|+++++...++.|..|+... . .. ...+.. ....+.++.+.+++.++++...++.|..|+.
T Consensus 65 ~~~g~l~v~~~~~~~i~~~~~~g--~------------~~-~~~~~~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~- 127 (299)
T 2z2n_A 65 SSDGEVWFTENAANKIGRITKKG--I------------IK-EYTLPN-PDSAPYGITEGPNGDIWFTEMNGNRIGRITD- 127 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECTTS--C------------EE-EEECSS-TTCCEEEEEECTTSCEEEEETTTTEEEEECT-
T ss_pred CCCCCEEEeCCCCCeEEEECCCC--c------------EE-EEeCCC-cCCCceeeEECCCCCEEEEecCCceEEEECC-
Confidence 46788888777788899898531 1 11 112222 3457889999999988887767788999987
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
.+. ............+..+.+.++ +.++++...++.|..||.
T Consensus 128 ~g~---------~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~ 169 (299)
T 2z2n_A 128 DGK---------IREYELPNKGSYPSFITLGSD-NALWFTENQNNAIGRITE 169 (299)
T ss_dssp TCC---------EEEEECSSTTCCEEEEEECTT-SCEEEEETTTTEEEEECT
T ss_pred CCC---------EEEecCCCCCCCCceEEEcCC-CCEEEEeCCCCEEEEEcC
Confidence 333 011111123456889999988 777777766788888887
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=3.9e-05 Score=47.11 Aligned_cols=104 Identities=10% Similarity=-0.057 Sum_probs=70.3
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
.++|+++++...++.|.+|+. .. . .. ...... ....+..+.+.+++.++++...++.|..++.
T Consensus 107 ~~~g~l~v~~~~~~~i~~~d~-~g-~------------~~-~~~~~~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~- 169 (299)
T 2z2n_A 107 GPNGDIWFTEMNGNRIGRITD-DG-K------------IR-EYELPN-KGSYPSFITLGSDNALWFTENQNNAIGRITE- 169 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECT-TC-C------------EE-EEECSS-TTCCEEEEEECTTSCEEEEETTTTEEEEECT-
T ss_pred CCCCCEEEEecCCceEEEECC-CC-C------------EE-EecCCC-CCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-
Confidence 467888887777888998885 11 1 01 112222 3456889999999987777766788999988
Q ss_pred CCCCCCceeeeeeeeee-ecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 82 PEAGDSDMVSFDLVHTE-HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
.+. .... .......+..+++.++ +.++++...++.|..||.
T Consensus 170 ~g~----------~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 170 SGD----------ITEFKIPTPASGPVGITKGND-DALWFVEIIGNKIGRITT 211 (299)
T ss_dssp TCC----------EEEEECSSTTCCEEEEEECTT-SSEEEEETTTTEEEEECT
T ss_pred CCc----------EEEeeCCCCCCcceeEEECCC-CCEEEEccCCceEEEECC
Confidence 433 1111 1123456788999988 887777666788999987
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=98.41 E-value=1.9e-05 Score=49.08 Aligned_cols=103 Identities=6% Similarity=-0.102 Sum_probs=65.7
Q ss_pred CccCCCeE-EEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l-~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|+++.+ ++.+.++.|.+|++..... .....+....+.. +......+++.++|.+.++....+.|..|+
T Consensus 156 ~spdg~~lyv~~~~~~~i~~~~~d~~~G--------~~~~~~~~~~~~~-~~~~p~g~~~d~~G~lwva~~~~~~v~~~d 226 (297)
T 3g4e_A 156 WSLDHKIFYYIDSLSYSVDAFDYDLQTG--------QISNRRSVYKLEK-EEQIPDGMCIDAEGKLWVACYNGGRVIRLD 226 (297)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEEECTTTC--------CEEEEEEEEECCG-GGCEEEEEEEBTTSCEEEEEETTTEEEEEC
T ss_pred EcCCCCEEEEecCCCCcEEEEeccCCCC--------cccCcEEEEECCC-CCCCCCeeEECCCCCEEEEEcCCCEEEEEc
Confidence 57888755 5667788999998631111 0011122333333 345678899999998888777778899999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEc-cCCCCEEEEEe
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN-PVVPGMLASCS 123 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~ 123 (138)
...++ ...........+++++|. |+ .+.|..++
T Consensus 227 ~~tG~----------~~~~i~~p~~~~t~~~f~g~d-~~~L~vt~ 260 (297)
T 3g4e_A 227 PVTGK----------RLQTVKLPVDKTTSCCFGGKN-YSEMYVTC 260 (297)
T ss_dssp TTTCC----------EEEEEECSSSBEEEEEEESGG-GCEEEEEE
T ss_pred CCCce----------EEEEEECCCCCceEEEEeCCC-CCEEEEEc
Confidence 87655 222222344678999998 77 66554333
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=1.9e-06 Score=59.57 Aligned_cols=110 Identities=11% Similarity=0.043 Sum_probs=66.5
Q ss_pred CccCCCeEE-----EeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeE-EecCCCccCeEEEEEecCCCeEEEeeCCC-
Q psy14817 1 MIQTGSRLA-----TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC-TLSGHHGRTIYDISWCHLTDLIATACGDD- 73 (138)
Q Consensus 1 ~s~~~~~l~-----t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~v~~~~~~~~~~s~~~d~- 73 (138)
|||||++|| .|++...|++||+..... +. .+.. .....++|+ |++.|+-++.+.
T Consensus 136 ~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~---------------~~~~~~~---~k~~~~~Ws-Dg~~l~y~~~~~~ 196 (693)
T 3iuj_A 136 FSRDGRILAYSLSLAGSDWREIHLMDVESKQP---------------LETPLKD---VKFSGISWL-GNEGFFYSSYDKP 196 (693)
T ss_dssp ECTTSSEEEEEEECSSCCEEEEEEEETTTCSE---------------EEEEEEE---EESCCCEEE-TTTEEEEEESSCC
T ss_pred ECCCCCEEEEEEecCCCceEEEEEEECCCCCC---------------CccccCC---ceeccEEEe-CCCEEEEEEecCc
Confidence 689999988 344456899999854321 11 1111 113567899 999777766663
Q ss_pred ------------cEEEEeccCCCCCCceeeeeeeeeeecc-cccceeEEEEccCCCCEEEEE-e---CCCcEEEEEcCCC
Q psy14817 74 ------------AIRIFKENPEAGDSDMVSFDLVHTEHRA-HNQDVNCVAWNPVVPGMLASC-S---DDGDVKLWQIKLE 136 (138)
Q Consensus 74 ------------~i~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~-~---~d~~v~~wd~~~~ 136 (138)
.|++|++.... ... ........ +......+.|+|+ +++|+.. + .+..|.++|+.++
T Consensus 197 ~~~~~~~~~~~~~v~~~~lgt~~---~~~---~~v~~~~~~~~~~~~~~~~SpD-g~~l~~~~~~~~~~~~i~~~d~~~~ 269 (693)
T 3iuj_A 197 DGSELSARTDQHKVYFHRLGTAQ---EDD---RLVFGAIPAQHHRYVGATVTED-DRFLLISAANSTSGNRLYVKDLSQE 269 (693)
T ss_dssp C-------CCCCEEEEEETTSCG---GGC---EEEESCSGGGCCSEEEEEECTT-SCEEEEEEESSSSCCEEEEEETTST
T ss_pred ccccccccCCCcEEEEEECCCCc---ccc---eEEEecCCCCCeEEEEEEEcCC-CCEEEEEEccCCCCcEEEEEECCCC
Confidence 38888876543 000 01111112 3345678899999 8766443 3 2357899998665
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=98.37 E-value=4e-05 Score=49.37 Aligned_cols=103 Identities=11% Similarity=0.045 Sum_probs=63.7
Q ss_pred CccCCCeEEEee----------CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC------CccCeEEEEEecCCC
Q psy14817 1 MIQTGSRLATCS----------DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH------HGRTIYDISWCHLTD 64 (138)
Q Consensus 1 ~s~~~~~l~t~s----------~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~v~~~~~~~ 64 (138)
|||+|+++..+. .++.|.+||..... .+..+... +......+.++|+|+
T Consensus 73 ~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~---------------~~~~i~~~~~~~~~~g~~p~~~~~spDG~ 137 (373)
T 2mad_H 73 AAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL---------------PIADIELPDAPRFDVGPYSWMNANTPNNA 137 (373)
T ss_pred ECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc---------------EEEEEECCCccccccCCCccceEECCCCC
Confidence 589999888875 36789999974322 22222210 012345789999999
Q ss_pred eEEEeeC--CCcEEEEeccCCCCCCceeeeeeeeee-ecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 65 LIATACG--DDAIRIFKENPEAGDSDMVSFDLVHTE-HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 65 ~~~s~~~--d~~i~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
+++.+.. ++.|.++| ..++ .... . .... ++.+.|+....+++.+.|+.+.++|.
T Consensus 138 ~l~v~n~~~~~~v~viD-~t~~----------~~~~~i-~~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 138 DLLFFQFAAGPAVGLVV-QGGS----------SDDQLL-SSPT---CYHIHPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred EEEEEecCCCCeEEEEE-CCCC----------EEeEEc-CCCc---eEEEEeCCCceEEEEcCCCCEEEEEC
Confidence 8887764 47899999 7655 1111 1 1111 13344553455666777888888877
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=98.34 E-value=2.6e-05 Score=50.84 Aligned_cols=111 Identities=11% Similarity=0.068 Sum_probs=69.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCC--cEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD--AIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~--~i~i~ 78 (138)
|+++++++++...++.|++||.... . +..+.. ...... ++|++++..++.+..++ .|.++
T Consensus 138 ~d~~g~lyv~d~~~~~I~~id~~~g---------------~-~~~~~~-~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~ 199 (409)
T 3hrp_A 138 AVGNNTVLAYQRDDPRVRLISVDDN---------------K-VTTVHP-GFKGGK-PAVTKDKQRVYSIGWEGTHTVYVY 199 (409)
T ss_dssp ECSTTEEEEEETTTTEEEEEETTTT---------------E-EEEEEE-TCCBCB-CEECTTSSEEEEEBSSTTCEEEEE
T ss_pred EeCCCCEEEEecCCCcEEEEECCCC---------------E-EEEeec-cCCCCc-eeEecCCCcEEEEecCCCceEEEE
Confidence 4578888888888899999996422 1 112211 122233 89999999888777655 68888
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+..... .... ...........+.+++++|+ ...|+.+..++.|..||..++
T Consensus 200 d~~~~~---~~~~---~g~~~~~~~~~p~~iav~p~-~g~lyv~d~~~~I~~~d~~~~ 250 (409)
T 3hrp_A 200 MKASGW---APTR---IGQLGSTFSGKIGAVALDET-EEWLYFVDSNKNFGRFNVKTQ 250 (409)
T ss_dssp EGGGTT---CEEE---EEECCTTSCSCCCBCEECTT-SSEEEEECTTCEEEEEETTTC
T ss_pred EcCCCc---eeEE---eeeccchhcCCcEEEEEeCC-CCeEEEEECCCcEEEEECCCC
Confidence 876543 0000 00001113456788999996 444444667888999998754
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=98.31 E-value=0.00011 Score=45.18 Aligned_cols=106 Identities=8% Similarity=0.008 Sum_probs=71.2
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
.++|+++++...++.|.+|+.. . . .. ...+.. ....+.++.+.+++.++++...++.|..++..
T Consensus 28 d~~g~l~v~~~~~~~v~~~~~~-~-~------------~~-~~~~~~-~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~ 91 (300)
T 2qc5_A 28 SEDGKVWFTQHKANKISSLDQS-G-R------------IK-EFEVPT-PDAKVMCLIVSSLGDIWFTENGANKIGKLSKK 91 (300)
T ss_dssp CTTSCEEEEETTTTEEEEECTT-S-C------------EE-EEECSS-TTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCCCCEEEEcCCCCeEEEECCC-C-c------------eE-EEECCC-CCCcceeEEECCCCCEEEEecCCCeEEEECCC
Confidence 4678888877778999999854 1 1 01 112222 34678899999999877777667889999877
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
+. ............+..+++.++ +.++++...++.|..+|..
T Consensus 92 -g~---------~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~ 133 (300)
T 2qc5_A 92 -GG---------FTEYPLPQPDSGPYGITEGLN-GDIWFTQLNGDRIGKLTAD 133 (300)
T ss_dssp -SC---------EEEEECSSTTCCEEEEEECST-TCEEEEETTTTEEEEECTT
T ss_pred -CC---------eEEecCCCCCCCCccceECCC-CCEEEEccCCCeEEEECCC
Confidence 43 111111123356888999887 8877777667788888765
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=98.28 E-value=7.8e-05 Score=52.04 Aligned_cols=112 Identities=8% Similarity=-0.114 Sum_probs=65.8
Q ss_pred CccCCCeEEEeeCCCc--------------EEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeE
Q psy14817 1 MIQTGSRLATCSDDAT--------------VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI 66 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~--------------v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~ 66 (138)
|||| +.|+.++.|+. |.+|++..... ....+..... +...+..+.|+|+|+++
T Consensus 216 wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~-----------~~~lv~~~~~-~~~~~~~~~~SpDG~~l 282 (741)
T 1yr2_A 216 WLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQS-----------ADQPVFATPE-LPKRGHGASVSSDGRWV 282 (741)
T ss_dssp ESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGG-----------GCEEEECCTT-CTTCEEEEEECTTSCEE
T ss_pred EECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCch-----------hCEEEeccCC-CCeEEEEEEECCCCCEE
Confidence 6899 88888887664 77888643321 0122333222 33458899999999977
Q ss_pred EEeeCCC-----cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC----CCcEEEEEcCC
Q psy14817 67 ATACGDD-----AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD----DGDVKLWQIKL 135 (138)
Q Consensus 67 ~s~~~d~-----~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~----d~~v~~wd~~~ 135 (138)
+..+.++ .|++||+..+.. . .......+...+... +.|+ +..|+..+. ++.|.+||+.+
T Consensus 283 ~~~~~~~~~~~~~l~~~d~~~~~~---~-----~~~~l~~~~~~~~~~-~~~d-g~~l~~~s~~~~~~~~l~~~d~~~ 350 (741)
T 1yr2_A 283 VITSSEGTDPVNTVHVARVTNGKI---G-----PVTALIPDLKAQWDF-VDGV-GDQLWFVSGDGAPLKKIVRVDLSG 350 (741)
T ss_dssp EEEEECTTCSCCEEEEEEEETTEE---C-----CCEEEECSSSSCEEE-EEEE-TTEEEEEECTTCTTCEEEEEECSS
T ss_pred EEEEEccCCCcceEEEEECCCCCC---c-----ccEEecCCCCceEEE-Eecc-CCEEEEEECCCCCCCEEEEEeCCC
Confidence 7665443 789998875410 0 011111222333333 3477 777666654 34588998875
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=98.25 E-value=2.8e-05 Score=50.97 Aligned_cols=107 Identities=9% Similarity=-0.065 Sum_probs=71.1
Q ss_pred cCCCeEEEeeC-C----CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee-------
Q psy14817 3 QTGSRLATCSD-D----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC------- 70 (138)
Q Consensus 3 ~~~~~l~t~s~-d----~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~------- 70 (138)
|+++.+..... + +.|.+.|... .+.+.++.. ...+ .+.++|+++.++.+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t---------------~~vv~~I~v-G~~P--gia~SpDgk~lyVan~~~~~~~ 143 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGST---------------GRILGMTDG-GFLP--HPVAAEDGSFFAQASTVFERIA 143 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTT---------------TEEEEEEEE-CSSC--EEEECTTSSCEEEEEEEEEETT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCC---------------CEEEEEEEC-CCCC--ceEECCCCCEEEEEeccccccc
Confidence 45554444433 3 6999999643 355666665 3444 899999999666654
Q ss_pred ---CCCcEEEEeccCCCCCCceeeeeeeeeeecc------cccceeEEEEccCCCCEEEEEeC--CCcEEEEEcCCCC
Q psy14817 71 ---GDDAIRIFKENPEAGDSDMVSFDLVHTEHRA------HNQDVNCVAWNPVVPGMLASCSD--DGDVKLWQIKLEN 137 (138)
Q Consensus 71 ---~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~l~~~~~--d~~v~~wd~~~~~ 137 (138)
.++.|.++|....+ ....+... .......+.++|+ +++++.++. ++.|.+.|+.+.+
T Consensus 144 ~G~~~~~VsviD~~t~~---------vv~~I~v~g~~r~~~g~~P~~~~~spD-Gk~lyV~n~~~~~~VsVID~~t~k 211 (426)
T 3c75_H 144 RGKRTDYVEVFDPVTFL---------PIADIELPDAPRFLVGTYQWMNALTPD-NKNLLFYQFSPAPAVGVVDLEGKT 211 (426)
T ss_dssp EEEEEEEEEEECTTTCC---------EEEEEEETTCCCCCBSCCGGGSEECTT-SSEEEEEECSSSCEEEEEETTTTE
T ss_pred cCCCCCEEEEEECCCCc---------EEEEEECCCccccccCCCcceEEEcCC-CCEEEEEecCCCCeEEEEECCCCe
Confidence 36689999998765 11111111 1134567899999 888888774 5789999998764
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=98.24 E-value=0.0001 Score=45.23 Aligned_cols=105 Identities=9% Similarity=0.018 Sum_probs=69.0
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
.++|+++++...++.|..+|.. . . .. ...... ....+.++++.+++.++++...++.|..++..
T Consensus 70 ~~~g~l~v~~~~~~~v~~~d~~-g-~------------~~-~~~~~~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 133 (300)
T 2qc5_A 70 SSLGDIWFTENGANKIGKLSKK-G-G------------FT-EYPLPQ-PDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD 133 (300)
T ss_dssp CTTSCEEEEETTTTEEEEECTT-S-C------------EE-EEECSS-TTCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred CCCCCEEEEecCCCeEEEECCC-C-C------------eE-EecCCC-CCCCCccceECCCCCEEEEccCCCeEEEECCC
Confidence 4677777777667888888853 1 1 01 122222 24568899999999887777667889988876
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
+. ............+..+.+.++ ++++++...++.|..+|.
T Consensus 134 -g~---------~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~i~~~~~ 174 (300)
T 2qc5_A 134 -GT---------IYEYDLPNKGSYPAFITLGSD-NALWFTENQNNSIGRITN 174 (300)
T ss_dssp -SC---------EEEEECSSTTCCEEEEEECTT-SSEEEEETTTTEEEEECT
T ss_pred -CC---------EEEccCCCCCCCceeEEECCC-CCEEEEecCCCeEEEECC
Confidence 33 111111123456788999988 777666666778888876
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.24 E-value=4.4e-05 Score=47.55 Aligned_cols=94 Identities=12% Similarity=-0.038 Sum_probs=60.6
Q ss_pred CccCCC-eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~-~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|+|+ ++++...++.|..|+... . ...+.. +...+..+.++++|.++++...++.|..|+
T Consensus 52 ~~~~g~~l~~~d~~~~~i~~~~~~g--~---------------~~~~~~-~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 52 WWEAQRTLVWSDLVGRRVLGWREDG--T---------------VDVLLD-ATAFTNGNAVDAQQRLVHCEHGRRAITRSD 113 (305)
T ss_dssp EEGGGTEEEEEETTTTEEEEEETTS--C---------------EEEEEE-SCSCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred EeCCCCEEEEEECCCCEEEEEeCCC--C---------------EEEEeC-CCCccceeeECCCCCEEEEECCCCEEEEEC
Confidence 467887 677888889999998521 1 122223 455788999999999776665667899998
Q ss_pred ccCCCCCCceeeeeeeeeeec-ccccceeEEEEccCCCCEEEE
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHR-AHNQDVNCVAWNPVVPGMLAS 121 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~ 121 (138)
.. +. .. ....... .....++.+.+.++ +.++++
T Consensus 114 ~~-g~----~~---~~~~~~~~~~~~~~~~i~~d~d-G~l~~t 147 (305)
T 3dr2_A 114 AD-GQ----AH---LLVGRYAGKRLNSPNDLIVARD-GAIWFT 147 (305)
T ss_dssp TT-SC----EE---EEECEETTEECSCCCCEEECTT-SCEEEE
T ss_pred CC-CC----EE---EEEeccCCCccCCCCCEEECCC-CCEEEe
Confidence 75 32 00 0111111 11245778999998 888876
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.23 E-value=3.3e-05 Score=48.15 Aligned_cols=108 Identities=6% Similarity=-0.002 Sum_probs=64.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeE-EecCCCccCeEEEEEecCCCeEEE----eeC----
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC-TLSGHHGRTIYDISWCHLTDLIAT----ACG---- 71 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~v~~~~~~~~~~s----~~~---- 71 (138)
++++|+++++...++.|.+|+... . ...+. ...+.....+..+.+.++|.++++ |..
T Consensus 93 ~d~dG~l~v~~~~~~~v~~~~~~g--~------------~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~ 158 (305)
T 3dr2_A 93 VDAQQRLVHCEHGRRAITRSDADG--Q------------AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQ 158 (305)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTS--C------------EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGG
T ss_pred ECCCCCEEEEECCCCEEEEECCCC--C------------EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccc
Confidence 357888777666667888888521 1 11111 112211234678999999998776 332
Q ss_pred ---------CCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC------CcEEEEEcCC
Q psy14817 72 ---------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD------GDVKLWQIKL 135 (138)
Q Consensus 72 ---------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------~~v~~wd~~~ 135 (138)
.+.|..++...+. ..... .....+.++|+|+ +..|+.+... +.|..|++..
T Consensus 159 ~~~~~~~~~~~~v~~~d~~~g~----------~~~~~--~~~~p~gl~~spd-g~~lyv~~~~~~~~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 159 GCPADPELAHHSVYRLPPDGSP----------LQRMA--DLDHPNGLAFSPD-EQTLYVSQTPEQGHGSVEITAFAWRD 224 (305)
T ss_dssp SCCCCCSSSCEEEEEECSSSCC----------CEEEE--EESSEEEEEECTT-SSEEEEEECCC---CCCEEEEEEEET
T ss_pred ccccccccCCCeEEEEcCCCCc----------EEEEe--cCCCCcceEEcCC-CCEEEEEecCCcCCCCCEEEEEEecC
Confidence 2346666654443 11111 2235678999999 8877666554 6899998754
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=98.20 E-value=0.00012 Score=45.34 Aligned_cols=81 Identities=6% Similarity=0.012 Sum_probs=52.3
Q ss_pred cCeEEEEEe----cCCCe-EEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccc-cceeEEEEccCCCCEEEEEeCC
Q psy14817 52 RTIYDISWC----HLTDL-IATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHN-QDVNCVAWNPVVPGMLASCSDD 125 (138)
Q Consensus 52 ~~v~~v~~~----~~~~~-~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~d 125 (138)
.....++++ +++.. +++...++.|.+|++.... ...... .......+. ..+..+++.++ ++++++...+
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g---~~~~~~-~~~~~~~~~~~~p~~i~~d~~-G~l~v~~~~~ 246 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPA---KIENKK-VWGHIPGTHEGGADGMDFDED-NNLLVANWGS 246 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETT---EEEEEE-EEEECCCCSSCEEEEEEEBTT-CCEEEEEETT
T ss_pred CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCC---ccccce-EEEECCCCCCCCCCceEECCC-CCEEEEEcCC
Confidence 356789999 99864 4554567889999976211 000000 111111222 45778999998 8888888788
Q ss_pred CcEEEEEcCCCC
Q psy14817 126 GDVKLWQIKLEN 137 (138)
Q Consensus 126 ~~v~~wd~~~~~ 137 (138)
+.|.+||.++++
T Consensus 247 ~~i~~~d~~~g~ 258 (314)
T 1pjx_A 247 SHIEVFGPDGGQ 258 (314)
T ss_dssp TEEEEECTTCBS
T ss_pred CEEEEEcCCCCc
Confidence 899999987443
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=98.18 E-value=3.9e-05 Score=49.65 Aligned_cols=106 Identities=12% Similarity=0.050 Sum_probs=64.6
Q ss_pred CccCCCeEEEee----------CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCC------ccCeEEEEEecCCC
Q psy14817 1 MIQTGSRLATCS----------DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH------GRTIYDISWCHLTD 64 (138)
Q Consensus 1 ~s~~~~~l~t~s----------~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~v~~~~~~~ 64 (138)
+||+|+++..++ .++.|.+||.... +.+.++.... ......+.++|+|+
T Consensus 85 ~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~---------------~v~~~I~v~~g~r~~~g~~P~~~a~spDGk 149 (386)
T 3sjl_D 85 VADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL---------------LPTADIELPDAPRFLVGTYPWMTSLTPDGK 149 (386)
T ss_dssp ECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC---------------CEEEEEEETTCCCCCBSCCGGGEEECTTSS
T ss_pred ECCCCCEEEEEcccccccccCCCCCEEEEEECCCC---------------eEEEEEECCCccccccCCCCceEEEcCCCC
Confidence 589999877665 3678999997543 2244432100 12455789999999
Q ss_pred eEEEeeC--CCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 65 LIATACG--DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 65 ~~~s~~~--d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
+++.+.. ++.|.++|+...+ ....+.... . ....|...+.+++.+.||++.+.++..
T Consensus 150 ~lyVan~~~~~~VsVID~~t~~---------vv~tI~v~g---~--~~~~P~g~~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 150 TLLFYQFSPAPAVGVVDLEGKA---------FKRMLDVPD---C--YHIFPTAPDTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp EEEEEECSSSCEEEEEETTTTE---------EEEEEECCS---E--EEEEEEETTEEEEEETTSCEEEEECCS
T ss_pred EEEEEEcCCCCeEEEEECCCCc---------EEEEEECCC---c--ceeecCCCceeEEECCCCCEEEEECCC
Confidence 8777764 6789999998765 111111111 1 112233245566777777777777654
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=98.17 E-value=0.00011 Score=47.91 Aligned_cols=117 Identities=9% Similarity=-0.008 Sum_probs=67.6
Q ss_pred CccCCCeEEEeeCCC--cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~ 78 (138)
|+|+++.|+.+..++ .|.+++...... ...+..+.......+.+++++|+...|+.+..++.|+.|
T Consensus 178 ~~~~g~~l~~~d~~~~~~I~~~d~~~~~~------------~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~ 245 (409)
T 3hrp_A 178 VTKDKQRVYSIGWEGTHTVYVYMKASGWA------------PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRF 245 (409)
T ss_dssp ECTTSSEEEEEBSSTTCEEEEEEGGGTTC------------EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEE
T ss_pred EecCCCcEEEEecCCCceEEEEEcCCCce------------eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEE
Confidence 467888888887766 677777533211 011211111134567889999955544446667889999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccc--eeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQD--VNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
+..... ....... ........ ...++|+|+.+.++++-..++.|+.|+...
T Consensus 246 d~~~~~----~~~~~~~--~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g 298 (409)
T 3hrp_A 246 NVKTQE----VTLIKQL--ELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG 298 (409)
T ss_dssp ETTTCC----EEEEEEC--CCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTC
T ss_pred ECCCCC----EEEEecc--cccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCC
Confidence 987543 0000000 01111111 238999996366667767788899988653
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.11 E-value=5e-07 Score=58.02 Aligned_cols=63 Identities=8% Similarity=0.028 Sum_probs=37.0
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 83 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~ 83 (138)
++..+++++.|+.|..||..... .+..+.. ..+.+..+..++..+++++.|+.|+.||...+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~---------------~~W~~~~---~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG 69 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGS---------------IKWTLKE---DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNN 69 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCC---------------EEEEEEC---CCSCCCC-----CCEEECTTTCCEEEC-----
T ss_pred eCCEEEEEcCCCEEEEEECCCCC---------------EEEEecC---CCceecceEcCCCEEEEeCCCCEEEEEECCCC
Confidence 57789999999999999965432 2333332 23333334456777888889999999998765
Q ss_pred C
Q psy14817 84 A 84 (138)
Q Consensus 84 ~ 84 (138)
+
T Consensus 70 ~ 70 (369)
T 2hz6_A 70 E 70 (369)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=98.02 E-value=0.0007 Score=42.64 Aligned_cols=101 Identities=10% Similarity=0.039 Sum_probs=61.2
Q ss_pred CccCCCeE-EEeeCCCcEEEeeccC-CC-CCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEE
Q psy14817 1 MIQTGSRL-ATCSDDATVKIWKEYK-PG-NSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l-~t~s~d~~v~iw~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i 77 (138)
|+|+++.+ ++.+.++.|.+|++.. .. . ....+.+..+.. .......+.+.++|.++++...++.|..
T Consensus 186 ~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~---------~~~~~~~~~~~~-~~~~p~gi~~d~~G~lwva~~~~~~v~~ 255 (326)
T 2ghs_A 186 FSPDGTTGYFVDTKVNRLMRVPLDARTGLP---------TGKAEVFIDSTG-IKGGMDGSVCDAEGHIWNARWGEGAVDR 255 (326)
T ss_dssp ECTTSCEEEEEETTTCEEEEEEBCTTTCCB---------SSCCEEEEECTT-SSSEEEEEEECTTSCEEEEEETTTEEEE
T ss_pred EcCCCCEEEEEECCCCEEEEEEcccccCCc---------ccCceEEEECCC-CCCCCCeeEECCCCCEEEEEeCCCEEEE
Confidence 47888755 4555678999999741 11 1 001122333333 3445678999999987777666778999
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEEEc-cCCCCEEEEEe
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN-PVVPGMLASCS 123 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~ 123 (138)
|+.. +. ...........+++++|. ++ +..|+.++
T Consensus 256 ~d~~-g~----------~~~~i~~~~~~~~~~af~g~d-~~~L~vt~ 290 (326)
T 2ghs_A 256 YDTD-GN----------HIARYEVPGKQTTCPAFIGPD-ASRLLVTS 290 (326)
T ss_dssp ECTT-CC----------EEEEEECSCSBEEEEEEESTT-SCEEEEEE
T ss_pred ECCC-CC----------EEEEEECCCCCcEEEEEecCC-CCEEEEEe
Confidence 9873 33 112222334568999998 77 66554433
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=97.99 E-value=0.00016 Score=45.87 Aligned_cols=123 Identities=10% Similarity=-0.074 Sum_probs=68.9
Q ss_pred CccCCCeEEEee--CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC-----CC
Q psy14817 1 MIQTGSRLATCS--DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-----DD 73 (138)
Q Consensus 1 ~s~~~~~l~t~s--~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~-----d~ 73 (138)
++|+|+.+++.. .++.++||.+. ...... .+... ..... +...+.++++++++.++++-.. +.
T Consensus 24 ~~~~g~~~v~~~~~~~~~~~l~~~~-~g~~~~--~p~~~------~~~~~-~~~~p~gv~~d~~g~L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 24 LTPDGRLFLSLHQFYQPEMQVAELT-QDGLIP--FPPQS------GNAII-TFDTVLGIKSDGNGIVWMLDNGNQSKSVP 93 (343)
T ss_dssp ECTTSCEEEEECGGGCCSCSEEEEE-TTEEEE--SCCCC------SSCCC-CCSCEEEEEECSSSEEEEEECHHHHTSCC
T ss_pred ECCCCCEEEEeCCCCCCceEEEEEC-CCCeec--CCCcc------cCccc-ceeEeeEEEEcCCCcEEEEcCCCCcCCCC
Confidence 467899998864 23436666654 111100 00000 01112 4568899999999876665433 56
Q ss_pred cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe---CCCcEEEEEcCCCC
Q psy14817 74 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS---DDGDVKLWQIKLEN 137 (138)
Q Consensus 74 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---~d~~v~~wd~~~~~ 137 (138)
.|.+||+..+. ......... ....+...+..+++.++.+..+++-. .++.|.+||+.+++
T Consensus 94 ~i~~~d~~tg~---~~~~~~~~~-~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~ 156 (343)
T 2qe8_A 94 KLVAWDTLNNQ---LSRVIYLPP-PITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL 156 (343)
T ss_dssp EEEEEETTTTE---EEEEEECCT-TTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC
T ss_pred eEEEEECCCCe---EEEEEECCh-hhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC
Confidence 89999987654 000000000 00112345688999986244555555 67889999987653
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.95 E-value=4.7e-07 Score=58.16 Aligned_cols=104 Identities=6% Similarity=0.011 Sum_probs=47.1
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeE-EEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIY-DISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
.++..+++++.|+.|+.||...... +..+.......+. ...+. .+..+++++.++.+..||..
T Consensus 47 ~~g~~~v~~s~dg~l~a~d~~tG~~---------------~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~ 110 (369)
T 2hz6_A 47 VEEPAFLPDPNDGSLYTLGSKNNEG---------------LTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLL 110 (369)
T ss_dssp ---CCEEECTTTCCEEEC-----CC---------------SEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC
T ss_pred cCCCEEEEeCCCCEEEEEECCCCce---------------eeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECC
Confidence 4567888888999999999754322 1222210000000 00001 23456677788999999998
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.++ ..-....+. ...++|+ +..+++++.|+.|+.||.++++
T Consensus 111 tG~----------~~w~~~~~~----~~~~~p~-~~~v~~~~~dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 111 TGE----------KQQTLSSAF----ADSLSPS-TSLLYLGRTEYTITMYDTKTRE 151 (369)
T ss_dssp -------------------------------------EEEEEEEEEEECCCSSSSS
T ss_pred CCc----------EEEEecCCC----ccccccc-CCEEEEEecCCEEEEEECCCCC
Confidence 776 111111111 1334566 7888889999999999998876
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=97.91 E-value=0.00025 Score=46.55 Aligned_cols=69 Identities=6% Similarity=0.144 Sum_probs=49.9
Q ss_pred EEEecCCCeEEEeeC----------CCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCC-EEEEEe-C
Q psy14817 57 ISWCHLTDLIATACG----------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCS-D 124 (138)
Q Consensus 57 v~~~~~~~~~~s~~~----------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~-~ 124 (138)
+.+++++..++.... .+.|.+.|....+ ....+. -....+.+.|+|+ ++ .++++. .
T Consensus 324 va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k---------vv~~I~--vg~~P~gia~spD-g~~~lyv~n~~ 391 (426)
T 3c75_H 324 TAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE---------RINKIE--LGHEIDSINVSQD-AEPLLYALSAG 391 (426)
T ss_dssp EEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC---------EEEEEE--EEEEECEEEECCS-SSCEEEEEETT
T ss_pred eEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe---------EEEEEE--CCCCcCeEEEccC-CCEEEEEEcCC
Confidence 678999885555432 3469999998776 222222 1235889999999 77 888887 5
Q ss_pred CCcEEEEEcCCCC
Q psy14817 125 DGDVKLWQIKLEN 137 (138)
Q Consensus 125 d~~v~~wd~~~~~ 137 (138)
++.|.++|..+.+
T Consensus 392 s~~VsVID~~t~k 404 (426)
T 3c75_H 392 TQTLHIYDAATGE 404 (426)
T ss_dssp TTEEEEEETTTCC
T ss_pred CCeEEEEECCCCC
Confidence 9999999998765
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=97.90 E-value=0.00015 Score=46.74 Aligned_cols=101 Identities=10% Similarity=-0.146 Sum_probs=66.3
Q ss_pred CeEEEeeCCC----cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee----------C
Q psy14817 6 SRLATCSDDA----TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC----------G 71 (138)
Q Consensus 6 ~~l~t~s~d~----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~----------~ 71 (138)
+.+++-..++ .|.+.|.. ..+.+.++.. ...+ .+.++|+++.++.+. .
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~---------------t~~v~~~i~v-G~~P--~i~~spDg~~lyVan~~~~r~~~G~~ 94 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAG---------------CGVTLGHSLG-AFLS--LAVAGHSGSDFALASTSFARSAKGKR 94 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETT---------------TTEEEEEEEE-CTTC--EEEECTTSSCEEEEEEEETTTTSSSE
T ss_pred eEEEECCccCCccceEEEEECC---------------CCeEEEEEeC-CCCC--ceEECCCCCEEEEEcccccccccCCC
Confidence 3455555555 77788853 3355677765 3444 799999999766665 3
Q ss_pred CCcEEEEeccCCCCCCceeeeeeeeeeecc--c----ccceeEEEEccCCCCEEEEEeC--CCcEEE--EEcC
Q psy14817 72 DDAIRIFKENPEAGDSDMVSFDLVHTEHRA--H----NQDVNCVAWNPVVPGMLASCSD--DGDVKL--WQIK 134 (138)
Q Consensus 72 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~v~~~~~~~~~~~~l~~~~~--d~~v~~--wd~~ 134 (138)
++.|.+||+...+ ....+..+ . ......+.++|+ +++++.+.. +..+.+ +|..
T Consensus 95 ~~~VsviD~~T~~---------vv~~I~v~~~~~~~~g~~P~~ia~SpD-Gk~lyVan~~~~~~v~V~~iD~~ 157 (368)
T 1mda_H 95 TDYVEVFDPVTFL---------PIADIELPDAPRFSVGPRVHIIGNCAS-SACLLFFLFGSSAAAGLSVPGAS 157 (368)
T ss_dssp EEEEEEECTTTCC---------EEEEEEETTSCSCCBSCCTTSEEECTT-SSCEEEEECSSSCEEEEEETTTE
T ss_pred CCEEEEEECCCCC---------EEEEEECCCccccccCCCcceEEEcCC-CCEEEEEccCCCCeEEEEEEchh
Confidence 6789999999876 12221111 0 134568999999 888887764 356877 7764
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=97.89 E-value=0.00037 Score=48.37 Aligned_cols=53 Identities=8% Similarity=0.112 Sum_probs=34.3
Q ss_pred CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 73 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 73 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.|..||+..++ ..+. ..+...++...+... +..++.++.|+.+++||.++++
T Consensus 457 g~l~A~D~~tG~-----~~W~------~~~~~~~~~g~~~~~-g~~v~~g~~dg~l~a~D~~tG~ 509 (677)
T 1kb0_A 457 GRLLAWDPVAQK-----AAWS------VEHVSPWNGGTLTTA-GNVVFQGTADGRLVAYHAATGE 509 (677)
T ss_dssp EEEEEEETTTTE-----EEEE------EEESSSCCCCEEEET-TTEEEEECTTSEEEEEETTTCC
T ss_pred cEEEEEeCCCCc-----EEee------cCCCCCCcCcceEeC-CCEEEEECCCCcEEEEECCCCc
Confidence 567777776554 1111 122233444445556 7788888999999999999876
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00093 Score=42.09 Aligned_cols=77 Identities=5% Similarity=-0.007 Sum_probs=48.6
Q ss_pred cCeEEEEEecCCCeE-EEeeCCCcEEEEecc--CC-CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCc
Q psy14817 52 RTIYDISWCHLTDLI-ATACGDDAIRIFKEN--PE-AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGD 127 (138)
Q Consensus 52 ~~v~~v~~~~~~~~~-~s~~~d~~i~i~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 127 (138)
.....++|+|++..+ ++...++.|.+|++. .+ . ......+ .........+..+.+.++ +.+.++...++.
T Consensus 179 ~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~-~~~~~~~----~~~~~~~~~p~gi~~d~~-G~lwva~~~~~~ 252 (326)
T 2ghs_A 179 SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLP-TGKAEVF----IDSTGIKGGMDGSVCDAE-GHIWNARWGEGA 252 (326)
T ss_dssp SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCB-SSCCEEE----EECTTSSSEEEEEEECTT-SCEEEEEETTTE
T ss_pred cccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCc-ccCceEE----EECCCCCCCCCeeEECCC-CCEEEEEeCCCE
Confidence 356789999999855 444556789999986 32 1 0011111 111122345677888888 777777666778
Q ss_pred EEEEEcC
Q psy14817 128 VKLWQIK 134 (138)
Q Consensus 128 v~~wd~~ 134 (138)
|..||..
T Consensus 253 v~~~d~~ 259 (326)
T 2ghs_A 253 VDRYDTD 259 (326)
T ss_dssp EEEECTT
T ss_pred EEEECCC
Confidence 9999874
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=0.0014 Score=45.60 Aligned_cols=114 Identities=7% Similarity=-0.054 Sum_probs=62.6
Q ss_pred CccCCCeEEEeeCCCc-------------EEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEE
Q psy14817 1 MIQTGSRLATCSDDAT-------------VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA 67 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~-------------v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~ 67 (138)
|+ ||+.|+.++.+.. |++|++...... -..+......+...+..+.|+|++++++
T Consensus 182 Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~-----------~~~v~~~~~~~~~~~~~~~~SpDg~~l~ 249 (693)
T 3iuj_A 182 WL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQED-----------DRLVFGAIPAQHHRYVGATVTEDDRFLL 249 (693)
T ss_dssp EE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGG-----------CEEEESCSGGGCCSEEEEEECTTSCEEE
T ss_pred Ee-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCccc-----------ceEEEecCCCCCeEEEEEEEcCCCCEEE
Confidence 56 8888888887743 888887543221 0222221110233567899999999654
Q ss_pred E-eeC---CCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC---CcEEEEEcCCC
Q psy14817 68 T-ACG---DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD---GDVKLWQIKLE 136 (138)
Q Consensus 68 s-~~~---d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---~~v~~wd~~~~ 136 (138)
. ... ...|+++++...... ...+ ..+....... ++++...+++....+ +.|..+|+.++
T Consensus 250 ~~~~~~~~~~~i~~~d~~~~~~~--------~~~l-~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~ 315 (693)
T 3iuj_A 250 ISAANSTSGNRLYVKDLSQENAP--------LLTV-QGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANP 315 (693)
T ss_dssp EEEESSSSCCEEEEEETTSTTCC--------CEEE-ECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred EEEccCCCCcEEEEEECCCCCCc--------eEEE-eCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 3 332 247889988754300 1111 1233333333 555524444555443 56888887654
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.78 E-value=0.00057 Score=47.59 Aligned_cols=27 Identities=15% Similarity=0.196 Sum_probs=22.5
Q ss_pred EEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 110 AWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 110 ~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.+... +.+++.++.|+.|+.||.++++
T Consensus 481 ~~~ta-gglvf~gt~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 481 TLSTA-GNLVFEGSADGRVIAYAADTGE 507 (689)
T ss_dssp EEEET-TTEEEEECTTSEEEEEETTTCC
T ss_pred cceEC-CCEEEEECCCCcEEEEECCCCc
Confidence 44445 7888899999999999999886
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.75 E-value=0.0032 Score=41.75 Aligned_cols=116 Identities=10% Similarity=0.017 Sum_probs=70.1
Q ss_pred CccCCCeEEEee-------------------CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC-CccCeEEEEE-
Q psy14817 1 MIQTGSRLATCS-------------------DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGRTIYDISW- 59 (138)
Q Consensus 1 ~s~~~~~l~t~s-------------------~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~- 59 (138)
|+|+++.+++.. .+.+|.+||+... +.+.++... .......++|
T Consensus 195 ~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~---------------k~~~tI~vg~~g~~P~~i~f~ 259 (462)
T 2ece_A 195 WNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR---------------KRIHSLTLGEENRMALELRPL 259 (462)
T ss_dssp EETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT---------------EEEEEEESCTTEEEEEEEEEC
T ss_pred ECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC---------------cEeeEEecCCCCCccceeEee
Confidence 478888888874 4789999997432 334555441 1134456666
Q ss_pred -ecCCCeEEEee------CCCcEEEEeccCCCCCCce-eeeeeeeeeecc-----------cccceeEEEEccCCCCEEE
Q psy14817 60 -CHLTDLIATAC------GDDAIRIFKENPEAGDSDM-VSFDLVHTEHRA-----------HNQDVNCVAWNPVVPGMLA 120 (138)
Q Consensus 60 -~~~~~~~~s~~------~d~~i~i~~~~~~~~~~~~-~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~l~ 120 (138)
+|+++++..++ .+++|.+|....+. ... ............ .......+.++++ +++|.
T Consensus 260 ~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~--~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D-GrfLY 336 (462)
T 2ece_A 260 HDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK--WNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD-DKFLY 336 (462)
T ss_dssp SSTTCCEEEEEEEEETTTCCEEEEEEEEETTE--EEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT-SCEEE
T ss_pred ECCCCCEEEEEEeeeccCCCceEEEEEecCCc--eeEEEEEeCCCccccccccccccccccCCCceeEEEECCC-CCEEE
Confidence 99998665554 56688887765321 000 000000000000 0245788999999 88877
Q ss_pred EEeC-CCcEEEEEcC
Q psy14817 121 SCSD-DGDVKLWQIK 134 (138)
Q Consensus 121 ~~~~-d~~v~~wd~~ 134 (138)
.++. ++.|.++|+.
T Consensus 337 VSnrg~d~VavfdV~ 351 (462)
T 2ece_A 337 LSLWGIGEVRQYDIS 351 (462)
T ss_dssp EEETTTTEEEEEECS
T ss_pred EEeCCCCEEEEEEec
Confidence 6665 7889999985
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=0.002 Score=39.66 Aligned_cols=109 Identities=11% Similarity=0.050 Sum_probs=68.0
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC----CCccCeEEEEEecCCCeEEEeeCCCcEEE
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG----HHGRTIYDISWCHLTDLIATACGDDAIRI 77 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~v~~~~~~~~~~s~~~d~~i~i 77 (138)
+++|+.++.+..++.|.++|.... +.+..+.- ..-..++.+.|. ++..++....++.|.+
T Consensus 113 t~Dg~~l~vs~gs~~l~viD~~t~---------------~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~v 176 (266)
T 2iwa_A 113 ATDGKILYGSDGTSILYEIDPHTF---------------KLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIAR 176 (266)
T ss_dssp EECSSSEEEECSSSEEEEECTTTC---------------CEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEE
T ss_pred EECCCEEEEECCCCeEEEEECCCC---------------cEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEE
Confidence 467766666667888888886432 22333322 011246778887 6666666556788999
Q ss_pred EeccCCCCCCceeeeeeeeeeecc------------cccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRA------------HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
.|...++ ........ .....+.++++|+....++++....++.+.++..
T Consensus 177 ID~~tg~---------V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 177 ISAKDGT---------LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EETTTCC---------EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EECCCCc---------EEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 9998876 11111111 1136689999998445667777788888887754
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00033 Score=49.17 Aligned_cols=110 Identities=13% Similarity=0.043 Sum_probs=60.0
Q ss_pred Cc-cCCCeEEEeeC-C----CcEEEeeccCC-CCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCC-
Q psy14817 1 MI-QTGSRLATCSD-D----ATVKIWKEYKP-GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD- 72 (138)
Q Consensus 1 ~s-~~~~~l~t~s~-d----~~v~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d- 72 (138)
|| |||++||-+.. + ..|+++|+... ... . ..+.. ....+.|+|+++.|+-...+
T Consensus 181 ~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l---------~-----~~~~~----~~~~~~WspDg~~l~y~~~d~ 242 (751)
T 2xe4_A 181 PAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTI---------A-----DKVSG----TNGEIVWGPDHTSLFYVTKDE 242 (751)
T ss_dssp ECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCC---------C-----CCEEE----ECSCCEECSSTTEEEEEEECT
T ss_pred ecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeC---------C-----ccccC----ceeeEEEecCCCEEEEEEECC
Confidence 57 99998884432 2 25999997554 210 0 00111 12367899999865555444
Q ss_pred ----CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe---CCCcEEEEEcCCC
Q psy14817 73 ----DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS---DDGDVKLWQIKLE 136 (138)
Q Consensus 73 ----~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---~d~~v~~wd~~~~ 136 (138)
..|..+++.... .... .+. ..........+.|+|+ +++|+..+ ....|.++|+.++
T Consensus 243 ~~~~~~v~~~~lgt~~---~~~~--lv~--~~~~~~~~~~~~~SpD-g~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 243 TLRENKVWRHVMGKLQ---SEDV--CLY--EEHNPLFSAFMYKAAD-TNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp TCCEEEEEEEETTSCG---GGCE--EEE--ECCCTTCEEEEEECTT-SSEEEEEEECSSCEEEEEEESSSC
T ss_pred CCCCCEEEEEECCCCc---hhcE--EEE--ecCCCceEEEEEECCC-CCEEEEEecCCCCceEEEEECCCC
Confidence 246666665432 0000 010 0112234567889999 88776554 2345777787654
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.0023 Score=39.45 Aligned_cols=107 Identities=6% Similarity=-0.107 Sum_probs=60.8
Q ss_pred CccCCCeEEEeeC--CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEE
Q psy14817 1 MIQTGSRLATCSD--DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s~--d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i 77 (138)
|++++.++++.+. +..|++.|+... +.+..+..........+.+. +. .+++.-.++.+.+
T Consensus 28 ~~~dg~Lyvstg~~~~s~v~~iD~~tg---------------~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~v 90 (266)
T 2iwa_A 28 YAENDTLFESTGLYGRSSVRQVALQTG---------------KVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFI 90 (266)
T ss_dssp ECSTTEEEEEECSTTTCEEEEEETTTC---------------CEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEE
T ss_pred EeCCCeEEEECCCCCCCEEEEEECCCC---------------CEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEE
Confidence 4566766666553 679999997543 22444332112223345554 44 4455557789999
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+|....+ .......+ ...-+. +.++ +..++.+..++.|.++|..+.+
T Consensus 91 iD~~t~~---------v~~~i~~g-~~~g~g--lt~D-g~~l~vs~gs~~l~viD~~t~~ 137 (266)
T 2iwa_A 91 YDRRTLS---------NIKNFTHQ-MKDGWG--LATD-GKILYGSDGTSILYEIDPHTFK 137 (266)
T ss_dssp EETTTTE---------EEEEEECC-SSSCCE--EEEC-SSSEEEECSSSEEEEECTTTCC
T ss_pred EECCCCc---------EEEEEECC-CCCeEE--EEEC-CCEEEEECCCCeEEEEECCCCc
Confidence 9998654 12222112 111233 4456 6656556678899999987654
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0049 Score=40.86 Aligned_cols=113 Identities=9% Similarity=0.051 Sum_probs=70.8
Q ss_pred cCCC-eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEec------CCCccCeEEEEEecCCCeEEEeeCC---
Q psy14817 3 QTGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS------GHHGRTIYDISWCHLTDLIATACGD--- 72 (138)
Q Consensus 3 ~~~~-~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~~v~~~~~~~~~~s~~~d--- 72 (138)
++++ +++++..+..|.++|+...... -+...++. .........+...|+| +++++..+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~-----------p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g 160 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPRE-----------PKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEG 160 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTS-----------CEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTS
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCC-----------ceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCC
Confidence 5565 4566778899999997543221 13344442 0012245678888999 76666555
Q ss_pred ---CcEEEEeccCCCCCCceeeeeeeeeeecc-c-ccceeEEEEccCCCCEEEEEe-------------------CCCcE
Q psy14817 73 ---DAIRIFKENPEAGDSDMVSFDLVHTEHRA-H-NQDVNCVAWNPVVPGMLASCS-------------------DDGDV 128 (138)
Q Consensus 73 ---~~i~i~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~v~~~~~~~~~~~~l~~~~-------------------~d~~v 128 (138)
+.+.+.|....+ ...+.... . ...-..+.|+|+ ++.+++.. .+..|
T Consensus 161 ~~~g~v~vlD~~T~~---------v~~~~~~~~~~~~~~Yd~~~~p~-~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V 230 (462)
T 2ece_A 161 EGPGGILMLDHYSFE---------PLGKWEIDRGDQYLAYDFWWNLP-NEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRI 230 (462)
T ss_dssp CSCCEEEEECTTTCC---------EEEECCSBCTTCCCCCCEEEETT-TTEEEECBCCCHHHHTTCCCTTTHHHHSCCEE
T ss_pred CCCCeEEEEECCCCe---------EEEEEccCCCCccccceEEECCC-CCEEEEccCcCccccccccchhhhhhccCCEE
Confidence 679999988766 22222111 1 122345788999 88888875 36889
Q ss_pred EEEEcCCCC
Q psy14817 129 KLWQIKLEN 137 (138)
Q Consensus 129 ~~wd~~~~~ 137 (138)
.+||+.+++
T Consensus 231 ~v~D~~~~k 239 (462)
T 2ece_A 231 HFWDLRKRK 239 (462)
T ss_dssp EEEETTTTE
T ss_pred EEEECCCCc
Confidence 999998653
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0063 Score=38.54 Aligned_cols=114 Identities=6% Similarity=0.011 Sum_probs=61.4
Q ss_pred ccCCCeEEEeeC-----CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC-----CCccCeEEEEEecCCC-eEEEee
Q psy14817 2 IQTGSRLATCSD-----DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-----HHGRTIYDISWCHLTD-LIATAC 70 (138)
Q Consensus 2 s~~~~~l~t~s~-----d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~v~~~~~~~-~~~s~~ 70 (138)
.++|+++++-.. +..|.+||+... +.+..+.. .+...+..+++++++. .+++-.
T Consensus 75 d~~g~L~v~D~g~~~~~~~~i~~~d~~tg---------------~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~ 139 (343)
T 2qe8_A 75 DGNGIVWMLDNGNQSKSVPKLVAWDTLNN---------------QLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDP 139 (343)
T ss_dssp CSSSEEEEEECHHHHTSCCEEEEEETTTT---------------EEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEEC
T ss_pred cCCCcEEEEcCCCCcCCCCeEEEEECCCC---------------eEEEEEECChhhcccccccceEEEecCCCEEEEEcC
Confidence 466776665543 578888996432 22222221 1234568899998654 445544
Q ss_pred ---CCCcEEEEeccCCCCCC------c-ee---eeeeeeeee---cc------cccceeEEEEccCCCCEEEEEeCCCcE
Q psy14817 71 ---GDDAIRIFKENPEAGDS------D-MV---SFDLVHTEH---RA------HNQDVNCVAWNPVVPGMLASCSDDGDV 128 (138)
Q Consensus 71 ---~d~~i~i~~~~~~~~~~------~-~~---~~~~~~~~~---~~------~~~~v~~~~~~~~~~~~l~~~~~d~~v 128 (138)
.++.|.+||+..+.... . .+ .+..--..+ .. ....+..++++|+ ++.|+.+..++.
T Consensus 140 ~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~d-g~~ly~~~~~~~- 217 (343)
T 2qe8_A 140 APDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAE-NEWLYLSPMHST- 217 (343)
T ss_dssp CSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTT-SCEEEEEESSCS-
T ss_pred ccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccC-CCEEEEEeCCCC-
Confidence 57789999987553000 0 00 000000000 00 0124688999999 888887776653
Q ss_pred EEEE
Q psy14817 129 KLWQ 132 (138)
Q Consensus 129 ~~wd 132 (138)
++|.
T Consensus 218 ~l~~ 221 (343)
T 2qe8_A 218 SMYR 221 (343)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 4443
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0033 Score=43.47 Aligned_cols=110 Identities=8% Similarity=-0.000 Sum_probs=63.2
Q ss_pred CCCeEEEeeCCC-----------cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC-
Q psy14817 4 TGSRLATCSDDA-----------TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG- 71 (138)
Q Consensus 4 ~~~~l~t~s~d~-----------~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~- 71 (138)
+++.++.|+.+. .+.+||.... .|..+......+.....++++..++.+++.|+.
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~-------------~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~ 263 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTG-------------IVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGND 263 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTC-------------CBCCCEEEECSCCCSSCEEEECTTSCEEEECSSS
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCC-------------cEEeCcccCCCCCCccccccCCCCCCEEEeCCCC
Confidence 677777776543 4667776432 233333332212233345677788998888874
Q ss_pred CCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe-CC-----CcEEEEEcCCC
Q psy14817 72 DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS-DD-----GDVKLWQIKLE 136 (138)
Q Consensus 72 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d-----~~v~~wd~~~~ 136 (138)
+..+.+||..... +..... . .....-..+...++ +.+++.|+ .+ ..+.+||..++
T Consensus 264 ~~~v~~yd~~t~~-------W~~~~~-~-~~~R~~~s~~~~~d-g~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 264 AKKTSLYDSSSDS-------WIPGPD-M-QVARGYQSSATMSD-GRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp TTCEEEEEGGGTE-------EEECCC-C-SSCCSSCEEEECTT-SCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred CCceEEecCcCCc-------eeECCC-C-CccccccceEEecC-CeEEEEeCcccCCcccccceEeCCCCC
Confidence 4579999987543 111111 1 11111233455567 88888888 34 56889998764
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=97.44 E-value=0.0088 Score=38.61 Aligned_cols=69 Identities=7% Similarity=-0.040 Sum_probs=47.8
Q ss_pred EEEecCCCeEEEeeC---------CCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCC-EEEEEe-CC
Q psy14817 57 ISWCHLTDLIATACG---------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCS-DD 125 (138)
Q Consensus 57 v~~~~~~~~~~s~~~---------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~-~d 125 (138)
+.+++++..++.+.. +..+.++|+...+ ....+..+ .....+.++|+ +. .+++.. .+
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~---------vv~~i~vg--~~p~gi~~s~D-g~~l~va~~~~~ 336 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ---------TSGPISNG--HDSDAIIAAQD-GASDNYANSAGT 336 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC---------EEECCEEE--EEECEEEECCS-SSCEEEEEETTT
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCe---------EEEEEECC--CCcceEEECCC-CCEEEEEccCCC
Confidence 679999986654422 2346699998776 22222212 26889999999 66 566666 59
Q ss_pred CcEEEEEcCCCC
Q psy14817 126 GDVKLWQIKLEN 137 (138)
Q Consensus 126 ~~v~~wd~~~~~ 137 (138)
+.|.++|+.+.+
T Consensus 337 ~~VsVID~~t~k 348 (368)
T 1mda_H 337 EVLDIYDAASDQ 348 (368)
T ss_dssp TEEEEEESSSCE
T ss_pred CeEEEEECCCCc
Confidence 999999998765
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0032 Score=38.63 Aligned_cols=103 Identities=4% Similarity=-0.023 Sum_probs=58.8
Q ss_pred CCCeEEEeeCCC--cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEec
Q psy14817 4 TGSRLATCSDDA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKE 80 (138)
Q Consensus 4 ~~~~l~t~s~d~--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~ 80 (138)
++.++.+.+.+| .|+++|+.... .+..+.. ..........+++. .+...-.++.+.++|.
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~Tgk---------------v~~~~~l--~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~ 114 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIESGK---------------TLQQIEL--GKRYFGEGISDWKDKIVGLTWKNGLGFVWNI 114 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTTCC---------------EEEEEEC--CTTCCEEEEEEETTEEEEEESSSSEEEEEET
T ss_pred CCEEEEECCCCCCceEEEEECCCCc---------------EEEEEec--CCccceeEEEEeCCEEEEEEeeCCEEEEEEC
Confidence 566777777776 89999975442 2444433 12333332333455 3444446889999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
...+ ....... ...-+.++ ++ +..|+.+..++.|.++|..+.+
T Consensus 115 ~t~~----------~~~ti~~-~~eG~glt--~d-g~~L~~SdGs~~i~~iDp~T~~ 157 (262)
T 3nol_A 115 RNLR----------QVRSFNY-DGEGWGLT--HN-DQYLIMSDGTPVLRFLDPESLT 157 (262)
T ss_dssp TTCC----------EEEEEEC-SSCCCCEE--EC-SSCEEECCSSSEEEEECTTTCS
T ss_pred ccCc----------EEEEEEC-CCCceEEe--cC-CCEEEEECCCCeEEEEcCCCCe
Confidence 8766 2222211 11223444 45 5555555557789999887643
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0083 Score=39.55 Aligned_cols=123 Identities=12% Similarity=0.095 Sum_probs=70.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC-----CCccCeEEEEEecCC---CeEEEeeCC
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-----HHGRTIYDISWCHLT---DLIATACGD 72 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~v~~~~~~---~~~~s~~~d 72 (138)
+||+|++||..+ +..|.|-.+........ .... ....+ .+.+.- .....|..+.|+|-+ ..+++-..|
T Consensus 73 lSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~-~~~~-~~~~q-~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD 148 (452)
T 3pbp_A 73 SSTSGDLLCLFN-DNEIFVMEVPWGYSNVE-DVSI-QDAFQ-IFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKED 148 (452)
T ss_dssp ECTTSSEEEEEC-SSEEEEEECCTTCSCCC-CHHH-HHTTE-EEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETT
T ss_pred ECCCCCEEEEec-CCeEEEEEecCccccCc-cccc-ccccc-eeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecC
Confidence 379999999885 46888888753211100 0000 00011 111111 124679999999976 489999999
Q ss_pred CcEEEEeccCCCCCCceeeeeeeeeee--cccccceeEEEEccCCCCEEEEEe--CCCcEEE
Q psy14817 73 DAIRIFKENPEAGDSDMVSFDLVHTEH--RAHNQDVNCVAWNPVVPGMLASCS--DDGDVKL 130 (138)
Q Consensus 73 ~~i~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~--~d~~v~~ 130 (138)
+.|++||+......+. ........+ ......|.+++|..+ +-.|...+ .+|.|.-
T Consensus 149 ~~Ir~yDl~~s~~~P~--~L~k~~~~fg~d~~~~ev~S~~Fg~~-~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 149 DTITMFDILNSQEKPI--VLNKPNNSFGLDARVNDITDLEFSKD-GLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp SCEEEEETTCTTSCCE--EESCCCSEEESCSSCCCEEEEEECTT-SSCEEEEECTTSCEEEE
T ss_pred CEEEEEEcccCCCCCc--chhccccccCCCcccceEEEEEEcCC-CcEEEEEecCCCCCEEE
Confidence 9999999997442111 110000000 122257788899887 76666644 6676654
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0035 Score=42.86 Aligned_cols=79 Identities=11% Similarity=0.022 Sum_probs=51.5
Q ss_pred CeEEEEEecCCCeE-EEeeCCCcEEEEeccCCC----CCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCc
Q psy14817 53 TIYDISWCHLTDLI-ATACGDDAIRIFKENPEA----GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGD 127 (138)
Q Consensus 53 ~v~~v~~~~~~~~~-~s~~~d~~i~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 127 (138)
...++.++|||+++ +++..+.+|.++|+.... +... +... .... ..-....+.++|+|+ +...++.-.|++
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~-~~~~-v~~~-v~vG~gP~h~aF~~d-G~aY~t~~ldsq 353 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENAD-PRSA-VVAE-PELGLGPLHTAFDGR-GNAYTSLFLDSQ 353 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCC-GGGG-EEEC-CBCCSCEEEEEECTT-SEEEEEETTTTE
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccC-cccc-eEEE-cCCCCCcceEEECCC-CeEEEEEecCCc
Confidence 45689999999955 445567899999998531 0000 0000 1111 123356889999999 755556667999
Q ss_pred EEEEEcCC
Q psy14817 128 VKLWQIKL 135 (138)
Q Consensus 128 v~~wd~~~ 135 (138)
|.+||+..
T Consensus 354 V~kwdi~~ 361 (595)
T 1fwx_A 354 VVKWNIED 361 (595)
T ss_dssp EEEEEHHH
T ss_pred EEEEEhhH
Confidence 99999864
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0086 Score=36.87 Aligned_cols=101 Identities=9% Similarity=-0.002 Sum_probs=60.3
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEE-ecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEecc
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT-LSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKEN 81 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~ 81 (138)
++.++.+.+.+|.|+++|+..... +.. +.. ....-.+.. ++. ++...-.++.+.++|..
T Consensus 64 ~~~Ly~stG~~g~v~~iD~~Tgkv---------------~~~~l~~--~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~ 124 (268)
T 3nok_A 64 QGHFFESTGHQGTLRQLSLESAQP---------------VWMERLG--NIFAEGLAS--DGERLYQLTWTEGLLFTWSGM 124 (268)
T ss_dssp TTEEEEEETTTTEEEECCSSCSSC---------------SEEEECT--TCCEEEEEE--CSSCEEEEESSSCEEEEEETT
T ss_pred CCEEEEEcCCCCEEEEEECCCCcE---------------EeEECCC--CcceeEEEE--eCCEEEEEEccCCEEEEEECC
Confidence 356778888899999999865433 222 222 112223444 444 44445578899999998
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..+ ....... ...-+.++ ++ +..|+.+..++.|.++|..+.+
T Consensus 125 Tl~----------~~~ti~~-~~eGwGLt--~D-g~~L~vSdGs~~l~~iDp~T~~ 166 (268)
T 3nok_A 125 PPQ----------RERTTRY-SGEGWGLC--YW-NGKLVRSDGGTMLTFHEPDGFA 166 (268)
T ss_dssp TTE----------EEEEEEC-SSCCCCEE--EE-TTEEEEECSSSEEEEECTTTCC
T ss_pred cCc----------EEEEEeC-CCceeEEe--cC-CCEEEEECCCCEEEEEcCCCCe
Confidence 765 2222211 12224454 45 6666666678899999987654
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0033 Score=43.01 Aligned_cols=131 Identities=14% Similarity=0.046 Sum_probs=70.4
Q ss_pred CccCCCeEE-EeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLA-TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~-t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
++|||++++ ++..+.+|.++|+........ ..-......+..+.. ......++|+++|..+.+.-.|+.|.+|+
T Consensus 284 ~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~---~~l~~~~~v~~~v~v--G~gP~h~aF~~dG~aY~t~~ldsqV~kwd 358 (595)
T 1fwx_A 284 MAPDKKHLCVAGKLSPTVTVLDVTRFDAVFY---ENADPRSAVVAEPEL--GLGPLHTAFDGRGNAYTSLFLDSQVVKWN 358 (595)
T ss_dssp ECTTSSEEEEECTTSSBEEEEEGGGHHHHHH---SCCCGGGGEEECCBC--CSCEEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred EcCCCCEEEEeCCCCCeEEEEECcccccccc---cccCcccceEEEcCC--CCCcceEEECCCCeEEEEEecCCcEEEEE
Confidence 589998655 555788999999864310000 000111122333332 45678899999995455666789999999
Q ss_pred ccCCC----C-CCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC---CCcE----------EEEEcCCCC
Q psy14817 80 ENPEA----G-DSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD---DGDV----------KLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~----~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---d~~v----------~~wd~~~~~ 137 (138)
+.... + .......+.......+|...-..+..+|+ +++|++.+. |+.+ .++|+..++
T Consensus 359 i~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~D-Gk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 359 IEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDAT-NDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp HHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCC-SSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred hhHhhhhhcccccceeEEEeecccccccceeccceEeCCC-CCEEEEcCCCCccccccCCCCCCCcceEEEcCCCc
Confidence 98621 0 00111111111000122212223345788 999988864 4432 677776554
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.015 Score=41.03 Aligned_cols=70 Identities=9% Similarity=-0.085 Sum_probs=40.0
Q ss_pred CccCCCeEEEeeCCC-----cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC---C
Q psy14817 1 MIQTGSRLATCSDDA-----TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG---D 72 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~-----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~---d 72 (138)
|+|||+.|+..+.|. .|.++++..... .-..+..-. .......+.|+|++++|+..+. .
T Consensus 228 WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~-----------~~~lv~~~~--~~~~~~~~~~SpDg~~l~~~~~~~~~ 294 (751)
T 2xe4_A 228 WGPDHTSLFYVTKDETLRENKVWRHVMGKLQS-----------EDVCLYEEH--NPLFSAFMYKAADTNTLCIGSQSPET 294 (751)
T ss_dssp ECSSTTEEEEEEECTTCCEEEEEEEETTSCGG-----------GCEEEEECC--CTTCEEEEEECTTSSEEEEEEECSSC
T ss_pred EecCCCEEEEEEECCCCCCCEEEEEECCCCch-----------hcEEEEecC--CCceEEEEEECCCCCEEEEEecCCCC
Confidence 689998887776652 455566533211 001222211 2335678899999996655432 2
Q ss_pred CcEEEEeccCC
Q psy14817 73 DAIRIFKENPE 83 (138)
Q Consensus 73 ~~i~i~~~~~~ 83 (138)
..|.++|+...
T Consensus 295 ~~l~~~d~~~~ 305 (751)
T 2xe4_A 295 AEVHLLDLRKG 305 (751)
T ss_dssp EEEEEEESSSC
T ss_pred ceEEEEECCCC
Confidence 34777777654
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.021 Score=39.08 Aligned_cols=22 Identities=23% Similarity=0.169 Sum_probs=18.8
Q ss_pred CCEEEEEeCCCcEEEEEcCCCC
Q psy14817 116 PGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 116 ~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+..++.++.|+.|+.+|.++++
T Consensus 475 gg~v~~g~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 475 GGLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEEcCCCeEEEEECCCCC
Confidence 5677778999999999998876
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.03 Score=34.04 Aligned_cols=102 Identities=7% Similarity=0.003 Sum_probs=57.6
Q ss_pred CCeEEEeeCCC--cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEecc
Q psy14817 5 GSRLATCSDDA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKEN 81 (138)
Q Consensus 5 ~~~l~t~s~d~--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~ 81 (138)
+.++.+.+.+| .|+++|+... +.+..+.. ............+. .+...-.++.+.++|..
T Consensus 31 ~~LyestG~~g~S~v~~vD~~tg---------------kv~~~~~l--~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~ 93 (243)
T 3mbr_X 31 GHLYESTGETGRSSVRKVDLETG---------------RILQRAEV--PPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLA 93 (243)
T ss_dssp TEEEEEECCTTSCEEEEEETTTC---------------CEEEEEEC--CTTCCEEEEEEETTEEEEEESSSSEEEEEETT
T ss_pred CEEEEECCCCCCceEEEEECCCC---------------CEEEEEeC--CCCcceeEEEEeCCEEEEEEeeCCEEEEEECC
Confidence 55666666654 8999997544 22444433 12222222233344 44445578899999998
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..+ ....... ...-+.++ ++ +..|+.+..++.|.++|..+.+
T Consensus 94 tl~----------~~~ti~~-~~~Gwglt--~d-g~~L~vSdgs~~l~~iDp~t~~ 135 (243)
T 3mbr_X 94 TLT----------PRARFRY-PGEGWALT--SD-DSHLYMSDGTAVIRKLDPDTLQ 135 (243)
T ss_dssp TTE----------EEEEEEC-SSCCCEEE--EC-SSCEEEECSSSEEEEECTTTCC
T ss_pred cCc----------EEEEEeC-CCCceEEe--eC-CCEEEEECCCCeEEEEeCCCCe
Confidence 765 2222211 12234555 45 5555555568889999987653
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=96.81 E-value=0.033 Score=33.82 Aligned_cols=104 Identities=7% Similarity=-0.102 Sum_probs=58.6
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeE-EEeeC--CCcEEEEecc
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACG--DDAIRIFKEN 81 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~-~s~~~--d~~i~i~~~~ 81 (138)
+..+++-...+.|.++++..... +.+ ... .......++++|++..+ ++-.. .+.|..+++.
T Consensus 91 ~~lyv~d~~~~~I~~~~~~g~~~-------------~~~--~~~-~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d 154 (267)
T 1npe_A 91 RTIFWTDSQLDRIEVAKMDGTQR-------------RVL--FDT-GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD 154 (267)
T ss_dssp TEEEEEETTTTEEEEEETTSCSC-------------EEE--ECS-SCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETT
T ss_pred CeEEEEECCCCEEEEEEcCCCCE-------------EEE--EEC-CCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecC
Confidence 34555555667787777532111 111 111 12457899999976644 44332 3678888776
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCE-EEEEeCCCcEEEEEcCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGM-LASCSDDGDVKLWQIKL 135 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-l~~~~~d~~v~~wd~~~ 135 (138)
... ..............+++.++ +.. +++-...+.|..+|+..
T Consensus 155 g~~----------~~~~~~~~~~~P~gia~d~~-~~~lyv~d~~~~~I~~~~~~g 198 (267)
T 1npe_A 155 GTN----------RRILAQDNLGLPNGLTFDAF-SSQLCWVDAGTHRAECLNPAQ 198 (267)
T ss_dssp SCC----------CEEEECTTCSCEEEEEEETT-TTEEEEEETTTTEEEEEETTE
T ss_pred CCC----------cEEEEECCCCCCcEEEEcCC-CCEEEEEECCCCEEEEEecCC
Confidence 432 11111122345788999987 554 45555567888888754
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=96.63 E-value=0.072 Score=35.28 Aligned_cols=82 Identities=11% Similarity=0.178 Sum_probs=54.3
Q ss_pred CeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCc-------eeeeeeeeeee-cccccceeEEEEccCC--CCEEEEE
Q psy14817 53 TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSD-------MVSFDLVHTEH-RAHNQDVNCVAWNPVV--PGMLASC 122 (138)
Q Consensus 53 ~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~-------~~~~~~~~~~~-~~~~~~v~~~~~~~~~--~~~l~~~ 122 (138)
.+..+..+|+|.+++..+. ..|.|..+..+..... ........... .....+|..+.|||-. +..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 5778999999998888754 4788888884321111 01111111100 0125689999999962 4589999
Q ss_pred eCCCcEEEEEcCC
Q psy14817 123 SDDGDVKLWQIKL 135 (138)
Q Consensus 123 ~~d~~v~~wd~~~ 135 (138)
..|+.|++||+..
T Consensus 146 tsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 146 KEDDTITMFDILN 158 (452)
T ss_dssp ETTSCEEEEETTC
T ss_pred ecCCEEEEEEccc
Confidence 9999999999875
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=96.62 E-value=0.078 Score=36.41 Aligned_cols=22 Identities=18% Similarity=0.268 Sum_probs=19.3
Q ss_pred CCEEEEEeCCCcEEEEEcCCCC
Q psy14817 116 PGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 116 ~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.+++.++.|+.++.+|.++++
T Consensus 497 gglvf~g~~dg~l~A~D~~tG~ 518 (582)
T 1flg_A 497 GNLVFTGTGDGYFKAFDAKSGK 518 (582)
T ss_dssp TTEEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEECCCCcEEEEECCCCC
Confidence 6678889999999999999876
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=96.57 E-value=0.059 Score=33.51 Aligned_cols=105 Identities=13% Similarity=0.053 Sum_probs=56.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCC--cEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD--AIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~--~i~i~ 78 (138)
|+++|+++++-..++.|..|+.... ....+.. .....++++.+++.++++..... .|..+
T Consensus 39 ~~~~g~lyv~d~~~~~I~~~d~~g~----------------~~~~~~~--~~~p~gia~~~dG~l~vad~~~~~~~v~~~ 100 (306)
T 2p4o_A 39 SAPDGTIFVTNHEVGEIVSITPDGN----------------QQIHATV--EGKVSGLAFTSNGDLVATGWNADSIPVVSL 100 (306)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTCC----------------EEEEEEC--SSEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred ECCCCCEEEEeCCCCeEEEECCCCc----------------eEEEEeC--CCCceeEEEcCCCcEEEEeccCCcceEEEE
Confidence 3567887777777888888885321 1111221 24678999999998666554332 35555
Q ss_pred eccCCCCCCceeeeeeeeeee-cccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEH-RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
+...+. ..... .........++..+. +..+++-..++.|..+|..
T Consensus 101 d~~~g~----------~~~~~~~~~~~~~~g~~~~~~-~~~~v~d~~~g~i~~~d~~ 146 (306)
T 2p4o_A 101 VKSDGT----------VETLLTLPDAIFLNGITPLSD-TQYLTADSYRGAIWLIDVV 146 (306)
T ss_dssp ECTTSC----------EEEEEECTTCSCEEEEEESSS-SEEEEEETTTTEEEEEETT
T ss_pred cCCCCe----------EEEEEeCCCccccCcccccCC-CcEEEEECCCCeEEEEeCC
Confidence 655443 11110 011122233443343 4444444457778877765
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=96.53 E-value=0.027 Score=39.26 Aligned_cols=53 Identities=6% Similarity=0.107 Sum_probs=32.8
Q ss_pred CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 73 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 73 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.|.-||+..++ ..+.. ..........+... +.+++.++.|+.|+.||.++++
T Consensus 438 g~l~A~D~~tG~-----~~W~~------~~~~~~~~~~~~t~-gg~vf~g~~dg~l~a~d~~tG~ 490 (668)
T 1kv9_A 438 GALLAWDPVKQK-----AAWKV------PYPTHWNGGTLSTA-GNLVFQGTAAGQMHAYSADKGE 490 (668)
T ss_dssp EEEEEEETTTTE-----EEEEE------EESSSCCCCEEEET-TTEEEEECTTSEEEEEETTTCC
T ss_pred ceEEEEeCCCCc-----EEEEc------cCCCCCcCceeEeC-CCEEEEECCcccchhhhhhcCh
Confidence 667777776654 11111 11122222233344 7788889999999999998876
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=96.53 E-value=0.06 Score=33.13 Aligned_cols=66 Identities=14% Similarity=0.162 Sum_probs=36.5
Q ss_pred CeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeee-----ecccccceeEEEEccCCCCEEEEEe
Q psy14817 53 TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTE-----HRAHNQDVNCVAWNPVVPGMLASCS 123 (138)
Q Consensus 53 ~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~l~~~~ 123 (138)
.++.+.|. +|..++..-.+..|.+.|...+. ........... ........+.|++.|+ .+.|+..+
T Consensus 173 ~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~---V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~-~~~lfVTG 243 (262)
T 3nol_A 173 ELNELEWV-DGEIFANVWQTNKIVRIDPETGK---VTGIIDLNGILAEAGPLPSPIDVLNGIAWDKE-HHRLFVTG 243 (262)
T ss_dssp CEEEEEEE-TTEEEEEETTSSEEEEECTTTCB---EEEEEECTTGGGGSCSCCSSCCCEEEEEEETT-TTEEEEEE
T ss_pred ccceeEEE-CCEEEEEEccCCeEEEEECCCCc---EEEEEECCcCccccccccCcCCceEEEEEcCC-CCEEEEEC
Confidence 34556776 56666666567789998988765 11111000000 0011246789999998 55554444
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=96.52 E-value=0.043 Score=38.30 Aligned_cols=31 Identities=3% Similarity=0.049 Sum_probs=24.2
Q ss_pred eEEEEEecCCCeEEEeeCCCcEEEEeccCCC
Q psy14817 54 IYDISWCHLTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 54 v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
+....+...+.+++.++.|+.+++||...++
T Consensus 479 ~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~ 509 (677)
T 1kb0_A 479 WNGGTLTTAGNVVFQGTADGRLVAYHAATGE 509 (677)
T ss_dssp CCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred CcCcceEeCCCEEEEECCCCcEEEEECCCCc
Confidence 3344455677778888999999999999877
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=96.47 E-value=0.062 Score=32.59 Aligned_cols=104 Identities=12% Similarity=-0.027 Sum_probs=59.2
Q ss_pred CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEeccCC
Q psy14817 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPE 83 (138)
Q Consensus 5 ~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~ 83 (138)
+.++++-..++.|..++...... . ..+.. .......+++++++. .+++-...+.|.++++...
T Consensus 48 ~~ly~~d~~~~~I~~~~~~g~~~-------------~--~~~~~-~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~ 111 (267)
T 1npe_A 48 KVVYWTDISEPSIGRASLHGGEP-------------T--TIIRQ-DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT 111 (267)
T ss_dssp TEEEEEETTTTEEEEEESSSCCC-------------E--EEECT-TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CEEEEEECCCCEEEEEecCCCCc-------------E--EEEEC-CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCC
Confidence 34555656677888888643211 1 11222 234678999999765 4555555678999988643
Q ss_pred CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC---CCcEEEEEcCC
Q psy14817 84 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD---DGDVKLWQIKL 135 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---d~~v~~wd~~~ 135 (138)
. ..............+++.|+ +..|..+.. .+.|..+++..
T Consensus 112 ~----------~~~~~~~~~~~P~~i~vd~~-~g~lyv~~~~~~~~~I~~~~~dg 155 (267)
T 1npe_A 112 Q----------RRVLFDTGLVNPRGIVTDPV-RGNLYWTDWNRDNPKIETSHMDG 155 (267)
T ss_dssp S----------CEEEECSSCSSEEEEEEETT-TTEEEEEECCSSSCEEEEEETTS
T ss_pred C----------EEEEEECCCCCccEEEEeeC-CCEEEEEECCCCCcEEEEEecCC
Confidence 2 11111112245688999986 444444433 35777777653
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.44 E-value=0.031 Score=39.12 Aligned_cols=27 Identities=7% Similarity=0.207 Sum_probs=22.7
Q ss_pred EEecCCCeEEEeeCCCcEEEEeccCCC
Q psy14817 58 SWCHLTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 58 ~~~~~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
.+...+.+++.++.|+.++.||.+.++
T Consensus 481 ~~~tagglvf~gt~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 481 TLSTAGNLVFEGSADGRVIAYAADTGE 507 (689)
T ss_dssp EEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred cceECCCEEEEECCCCcEEEEECCCCc
Confidence 445567788889999999999999887
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.096 Score=31.86 Aligned_cols=102 Identities=9% Similarity=0.010 Sum_probs=59.1
Q ss_pred CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCC
Q psy14817 6 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAG 85 (138)
Q Consensus 6 ~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~ 85 (138)
+++...-.++.+.++|... .+.+.++.. . ..-..+ .+++..++.+..++.|.++|.....
T Consensus 76 ~ly~ltw~~~~v~v~D~~t---------------l~~~~ti~~-~-~~Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~~- 135 (243)
T 3mbr_X 76 RLIQLTWRNHEGFVYDLAT---------------LTPRARFRY-P-GEGWAL--TSDDSHLYMSDGTAVIRKLDPDTLQ- 135 (243)
T ss_dssp EEEEEESSSSEEEEEETTT---------------TEEEEEEEC-S-SCCCEE--EECSSCEEEECSSSEEEEECTTTCC-
T ss_pred EEEEEEeeCCEEEEEECCc---------------CcEEEEEeC-C-CCceEE--eeCCCEEEEECCCCeEEEEeCCCCe-
Confidence 3444555688899999533 355666654 2 222344 4567766666667889999988755
Q ss_pred CCceeeeeeeeeeec-ccc---cceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 86 DSDMVSFDLVHTEHR-AHN---QDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 86 ~~~~~~~~~~~~~~~-~~~---~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
....... .+. ..++-+.|. + +..++..-.+..|.+.|.++++
T Consensus 136 --------~~~~I~V~~~g~~~~~lNeLe~~-~-G~lyanvw~s~~I~vIDp~tG~ 181 (243)
T 3mbr_X 136 --------QVGSIKVTAGGRPLDNLNELEWV-N-GELLANVWLTSRIARIDPASGK 181 (243)
T ss_dssp --------EEEEEECEETTEECCCEEEEEEE-T-TEEEEEETTTTEEEEECTTTCB
T ss_pred --------EEEEEEEccCCcccccceeeEEe-C-CEEEEEECCCCeEEEEECCCCC
Confidence 1111111 111 234455554 3 5555555557788888888765
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.15 Score=33.64 Aligned_cols=72 Identities=3% Similarity=-0.107 Sum_probs=46.6
Q ss_pred CeEEEEEec-CCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCC-EEEEEeCCCcEEE
Q psy14817 53 TIYDISWCH-LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCSDDGDVKL 130 (138)
Q Consensus 53 ~v~~v~~~~-~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~d~~v~~ 130 (138)
....++++| ++.++++-..++.|..++..... ...............++++|+ ++ ++++-...+.|..
T Consensus 227 ~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~---------~~~~~~~~~~~~P~gia~~pd-G~~lyv~d~~~~~I~~ 296 (430)
T 3tc9_A 227 NCNGAETHPINGELYFNSWNAGQVFRYDFTTQE---------TTPLFTIQDSGWEFHIQFHPS-GNYAYIVVVNQHYILR 296 (430)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEEETTTTE---------EEEEEECSSSSCCEEEEECTT-SSEEEEEETTTTEEEE
T ss_pred CceEEEEeCCCCEEEEEECCCCEEEEEECCCCc---------EEEEEEcCCCCcceeEEEcCC-CCEEEEEECCCCEEEE
Confidence 356788999 66666666677889999887443 001111122245678999999 88 4555556778888
Q ss_pred EEcC
Q psy14817 131 WQIK 134 (138)
Q Consensus 131 wd~~ 134 (138)
++..
T Consensus 297 ~~~d 300 (430)
T 3tc9_A 297 SDYD 300 (430)
T ss_dssp EEEE
T ss_pred EeCC
Confidence 7765
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=96.14 E-value=0.11 Score=32.22 Aligned_cols=58 Identities=9% Similarity=-0.071 Sum_probs=31.3
Q ss_pred CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 6 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 6 ~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
..+..++.++.|..+|.. . +....... ....+.++...+++. +..++.++.|..++..
T Consensus 108 ~~l~v~t~~~~l~~~d~~-g---------------~~~~~~~~-~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~ 165 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINTD-G---------------TEKWRFKT-KKAIYATPIVSEDGT-IYVGSNDNYLYAINPD 165 (330)
T ss_dssp TEEEEECTTSEEEEECTT-S---------------CEEEEEEC-SSCCCSCCEECTTSC-EEEECTTSEEEEECTT
T ss_pred CEEEEEecCCEEEEEcCC-C---------------CEEEEEcC-CCceeeeeEEcCCCE-EEEEcCCCEEEEECCC
Confidence 345556667777777753 1 11222222 223344455555555 4445566778888876
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=96.13 E-value=0.13 Score=32.81 Aligned_cols=105 Identities=6% Similarity=0.016 Sum_probs=57.4
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCC--------ccCeEEEEEecCCCeEEEeeCCCcE
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH--------GRTIYDISWCHLTDLIATACGDDAI 75 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~v~~v~~~~~~~~~~s~~~d~~i 75 (138)
.+..+..++.++.|..+|...... +....... ...+.+. ...++..++.++.++.|
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~---------------~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l 115 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKE---------------IWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQV 115 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCE---------------EEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCce---------------eeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEE
Confidence 345677778888999999644321 22221100 1122221 22245667778888999
Q ss_pred EEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 76 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..+|...++ ..+... ........... . ...++.++.++.|..+|.++++
T Consensus 116 ~a~d~~tG~-----~~W~~~-----~~~~~~~~p~~--~-~~~v~v~~~~g~l~~~d~~tG~ 164 (376)
T 3q7m_A 116 YALNTSDGT-----VAWQTK-----VAGEALSRPVV--S-DGLVLIHTSNGQLQALNEADGA 164 (376)
T ss_dssp EEEETTTCC-----EEEEEE-----CSSCCCSCCEE--E-TTEEEEECTTSEEEEEETTTCC
T ss_pred EEEECCCCC-----EEEEEe-----CCCceEcCCEE--E-CCEEEEEcCCCeEEEEECCCCc
Confidence 999988765 111111 11111111111 1 4567777888899999987765
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=96.08 E-value=0.14 Score=32.70 Aligned_cols=57 Identities=9% Similarity=0.082 Sum_probs=34.7
Q ss_pred CCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeE-EEEccCCCCEEEEEeCCCcEEEEE
Q psy14817 63 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNC-VAWNPVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 63 ~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~~~~~d~~v~~wd 132 (138)
+..++.++.++.+..+|...++ ...........+.. ... . +..|+.++.+|.|..|+
T Consensus 318 ~~~l~v~~~~g~l~~~d~~tG~----------~~~~~~~~~~~~~~~~~~--~-~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 318 NGNLVVGDSEGYLHWINVEDGR----------FVAQQKVDSSGFQTEPVA--A-DGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCC----------EEEEEECCTTCBCSCCEE--E-TTEEEEEBTTSCEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCc----------EEEEEecCCCcceeCCEE--E-CCEEEEEeCCCEEEEEe
Confidence 4567777888999999988765 11111111122221 111 2 56778888999999886
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=95.92 E-value=0.19 Score=33.07 Aligned_cols=76 Identities=16% Similarity=0.260 Sum_probs=42.8
Q ss_pred ccCeEEEEEecCCCeEEEeeC-CC----cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC
Q psy14817 51 GRTIYDISWCHLTDLIATACG-DD----AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD 125 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~-d~----~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 125 (138)
......+++++++..++.+.. ++ .+.+.+..... ... ... ........+++.|+++.++++-..+
T Consensus 178 ~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~---~~~------~~l-~~~~~p~giavdp~~g~lyv~d~~~ 247 (430)
T 3tc9_A 178 LSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF---KVI------TEL-TKGQNCNGAETHPINGELYFNSWNA 247 (430)
T ss_dssp CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS---CSE------EEE-EECSSCCCEEECTTTCCEEEEETTT
T ss_pred CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce---eee------eee-ccCCCceEEEEeCCCCEEEEEECCC
Confidence 456789999999994444433 22 23333332211 000 000 1123457788888436666666667
Q ss_pred CcEEEEEcCCC
Q psy14817 126 GDVKLWQIKLE 136 (138)
Q Consensus 126 ~~v~~wd~~~~ 136 (138)
+.|..++...+
T Consensus 248 ~~V~~~~~~~~ 258 (430)
T 3tc9_A 248 GQVFRYDFTTQ 258 (430)
T ss_dssp TEEEEEETTTT
T ss_pred CEEEEEECCCC
Confidence 88888887643
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=95.89 E-value=0.16 Score=31.78 Aligned_cols=108 Identities=7% Similarity=-0.084 Sum_probs=59.4
Q ss_pred CccCCCeE-EEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC--------
Q psy14817 1 MIQTGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-------- 71 (138)
Q Consensus 1 ~s~~~~~l-~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~-------- 71 (138)
++|+|+.| ++-+..+.|.++++..... ...+.+.. . .+ ...+++.++|.++++...
T Consensus 192 ~~~dg~~lyv~d~~~~~I~~~~~~~~~~----------~~~~~~~~--~--~g-P~gi~~d~~G~l~va~~~~~~~~~~~ 256 (322)
T 2fp8_A 192 VSADSSFVLVAEFLSHQIVKYWLEGPKK----------GTAEVLVK--I--PN-PGNIKRNADGHFWVSSSEELDGNMHG 256 (322)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEESSSTTT----------TCEEEEEE--C--SS-EEEEEECTTSCEEEEEEEETTSSTTS
T ss_pred ECCCCCEEEEEeCCCCeEEEEECCCCcC----------CccceEEe--C--CC-CCCeEECCCCCEEEEecCcccccccC
Confidence 46778744 4546678898888753211 11122222 1 22 678999999986666543
Q ss_pred --CCcEEEEeccCCCCCCceeeeeeeeeeeccc---ccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 72 --DDAIRIFKENPEAGDSDMVSFDLVHTEHRAH---NQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 72 --d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
.+.|..++.. +. ......... -..+..+.+ .+ +.++++...++.|..+++..
T Consensus 257 ~~~~~v~~~d~~-G~---------~~~~~~~~~g~~~~~~~~~~~-~~-g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 257 RVDPKGIKFDEF-GN---------ILEVIPLPPPFAGEHFEQIQE-HD-GLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp CEEEEEEEECTT-SC---------EEEEEECCTTTTTSCCCEEEE-ET-TEEEEECSSCSEEEEEEC--
T ss_pred CCccEEEEECCC-CC---------EEEEEECCCCCccccceEEEE-eC-CEEEEeecCCCceEEEeccc
Confidence 3557777654 22 111111111 234566665 34 66666666778899888754
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=95.79 E-value=0.16 Score=31.48 Aligned_cols=55 Identities=9% Similarity=-0.006 Sum_probs=30.8
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
++. +..++.++.|..+|.. . +.+..+.. ....+.++...+++.+++.. +.|..++
T Consensus 147 ~g~-l~vgt~~~~l~~~d~~-g---------------~~~~~~~~-~~~~~~~~~~d~~g~l~v~t---~~l~~~d 201 (330)
T 3hxj_A 147 DGT-IYVGSNDNYLYAINPD-G---------------TEKWRFKT-NDAITSAASIGKDGTIYFGS---DKVYAIN 201 (330)
T ss_dssp TSC-EEEECTTSEEEEECTT-S---------------CEEEEEEC-SSCCCSCCEECTTCCEEEES---SSEEEEC
T ss_pred CCE-EEEEcCCCEEEEECCC-C---------------CEeEEEec-CCCceeeeEEcCCCEEEEEe---CEEEEEC
Confidence 344 5557777888888853 1 11222222 23345556666666655443 6677777
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=95.75 E-value=0.2 Score=32.00 Aligned_cols=77 Identities=6% Similarity=0.097 Sum_probs=50.8
Q ss_pred CeEEEEEecCCCeEEEeeCC-CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEE
Q psy14817 53 TIYDISWCHLTDLIATACGD-DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 131 (138)
Q Consensus 53 ~v~~v~~~~~~~~~~s~~~d-~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~w 131 (138)
....+...++|...++++.- +.|...+..... ...+.. ...........+.|.++|+ +..|+....++.|.-+
T Consensus 138 ~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~----~~~~~~-~~~~~~~~~G~nGIv~~pd-g~~Liv~~~~g~L~~f 211 (334)
T 2p9w_A 138 GVVQSAQDRDGNSYVAFALGMPAIARVSADGKT----VSTFAW-ESGNGGQRPGYSGITFDPH-SNKLIAFGGPRALTAF 211 (334)
T ss_dssp EEEEEEECTTSCEEEEEEESSCEEEEECTTSCC----EEEEEE-CCCCSSSCCSCSEEEEETT-TTEEEEESSSSSEEEE
T ss_pred CCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE----Eeeeee-cCCCcccccCcceEEEeCC-CCEEEEEcCCCeEEEE
Confidence 47889999999988888777 776666655322 111110 0000112335779999999 8877777669999999
Q ss_pred EcCC
Q psy14817 132 QIKL 135 (138)
Q Consensus 132 d~~~ 135 (138)
|++.
T Consensus 212 D~~~ 215 (334)
T 2p9w_A 212 DVSK 215 (334)
T ss_dssp ECSS
T ss_pred cCCC
Confidence 9763
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=95.74 E-value=0.21 Score=34.54 Aligned_cols=22 Identities=14% Similarity=0.075 Sum_probs=19.2
Q ss_pred CCEEEEEeCCCcEEEEEcCCCC
Q psy14817 116 PGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 116 ~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.+++.++.|+.|+.+|.++++
T Consensus 484 gg~vf~gt~dg~l~A~D~~tG~ 505 (599)
T 1w6s_A 484 GDLVFYGTLDGYLKARDSDTGD 505 (599)
T ss_dssp TTEEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEECCCCeEEEEECCCCC
Confidence 6677789999999999999876
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.74 E-value=0.17 Score=31.03 Aligned_cols=123 Identities=7% Similarity=0.027 Sum_probs=65.1
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEe---cCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL---SGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
+++.++++.-.++.+.++++...... .... ...+ ........-.++|+|.+..+..+.......+|.
T Consensus 79 ~~g~~~vs~E~~~~l~~~~v~~~~~i---------~~~~-~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~ 148 (255)
T 3qqz_A 79 GDNQFVISDERDYAIYVISLTPNSEV---------KILK-KIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYK 148 (255)
T ss_dssp STTEEEEEETTTTEEEEEEECTTCCE---------EEEE-EEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEE
T ss_pred CCCEEEEEECCCCcEEEEEcCCCCee---------eeee-eeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEE
Confidence 45666566556678888876433210 0001 1111 111345578999999997666666555556665
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
+.........................+..++++|..+.+++.......|.++|...
T Consensus 149 ~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g 204 (255)
T 3qqz_A 149 VNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVG 204 (255)
T ss_dssp EESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTC
T ss_pred EcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCC
Confidence 55211000111100000000112346789999998666677777777788887654
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=95.70 E-value=0.22 Score=32.21 Aligned_cols=75 Identities=9% Similarity=-0.084 Sum_probs=45.3
Q ss_pred ccCeEEEEEecCCC-eEEEeeCC-CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcE
Q psy14817 51 GRTIYDISWCHLTD-LIATACGD-DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 128 (138)
Q Consensus 51 ~~~v~~v~~~~~~~-~~~s~~~d-~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v 128 (138)
......++++|.+. ++++-... +.|..+++.... ........-...+.|++.|+.+.++++-...+.|
T Consensus 201 l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~----------~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I 270 (386)
T 3v65_B 201 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG----------RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVI 270 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS----------CEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEE
T ss_pred CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC----------cEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEE
Confidence 35678999998766 44444344 678887776433 1111112234578899998734444555556778
Q ss_pred EEEEcCC
Q psy14817 129 KLWQIKL 135 (138)
Q Consensus 129 ~~wd~~~ 135 (138)
..+|+..
T Consensus 271 ~~~d~dG 277 (386)
T 3v65_B 271 ERANLDG 277 (386)
T ss_dssp EEECTTS
T ss_pred EEEeCCC
Confidence 8877654
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=95.63 E-value=0.11 Score=36.47 Aligned_cols=74 Identities=11% Similarity=-0.083 Sum_probs=42.8
Q ss_pred cCeEEEEEecCCC-eEEEeeCC-CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEE
Q psy14817 52 RTIYDISWCHLTD-LIATACGD-DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 129 (138)
Q Consensus 52 ~~v~~v~~~~~~~-~~~s~~~d-~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~ 129 (138)
.....|+++|.+. ++++-... +.|..+++.... ...+....-...+.|++.|+.+.++++-...+.|.
T Consensus 496 ~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~----------~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~ 565 (699)
T 1n7d_A 496 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD----------IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSIS 565 (699)
T ss_dssp CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC----------CCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEE
T ss_pred CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC----------eeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEE
Confidence 3456788888655 44443222 567777665432 11111122345678999987455555555677788
Q ss_pred EEEcCC
Q psy14817 130 LWQIKL 135 (138)
Q Consensus 130 ~wd~~~ 135 (138)
.+++..
T Consensus 566 ~~d~dG 571 (699)
T 1n7d_A 566 SIDVNG 571 (699)
T ss_dssp EECSSS
T ss_pred EEccCC
Confidence 888754
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=95.54 E-value=0.25 Score=31.56 Aligned_cols=75 Identities=9% Similarity=-0.084 Sum_probs=46.1
Q ss_pred ccCeEEEEEecCCC-eEEEeeCC-CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcE
Q psy14817 51 GRTIYDISWCHLTD-LIATACGD-DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 128 (138)
Q Consensus 51 ~~~v~~v~~~~~~~-~~~s~~~d-~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v 128 (138)
......++++|.+. ++++-... +.|...++.... ........-...+.+++.|+++.++++-...+.|
T Consensus 158 l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~----------~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I 227 (349)
T 3v64_C 158 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG----------RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVI 227 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS----------CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC----------cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEE
Confidence 34678999998665 45554444 678888776433 1111112234578899998734444555556778
Q ss_pred EEEEcCC
Q psy14817 129 KLWQIKL 135 (138)
Q Consensus 129 ~~wd~~~ 135 (138)
..+|+..
T Consensus 228 ~~~~~dG 234 (349)
T 3v64_C 228 ERANLDG 234 (349)
T ss_dssp EEEETTS
T ss_pred EEEeCCC
Confidence 8888754
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=95.28 E-value=0.27 Score=30.40 Aligned_cols=102 Identities=10% Similarity=-0.013 Sum_probs=61.4
Q ss_pred CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCC
Q psy14817 6 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAG 85 (138)
Q Consensus 6 ~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~ 85 (138)
++++..-.++.+.++|... .+.+.++... ..-..++ +++..++.+..++.|.++|....+
T Consensus 107 ~Ly~ltw~~~~v~V~D~~T---------------l~~~~ti~~~--~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~- 166 (268)
T 3nok_A 107 RLYQLTWTEGLLFTWSGMP---------------PQRERTTRYS--GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFA- 166 (268)
T ss_dssp CEEEEESSSCEEEEEETTT---------------TEEEEEEECS--SCCCCEE--EETTEEEEECSSSEEEEECTTTCC-
T ss_pred EEEEEEccCCEEEEEECCc---------------CcEEEEEeCC--CceeEEe--cCCCEEEEECCCCEEEEEcCCCCe-
Confidence 4445555688999999533 3556666541 2223443 567777666668889999988755
Q ss_pred CCceeeeeeeeeeec-cc---ccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 86 DSDMVSFDLVHTEHR-AH---NQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 86 ~~~~~~~~~~~~~~~-~~---~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
....... .+ -..++-+.|. + +.+++..-.+..|.+.|.++++
T Consensus 167 --------v~~~I~V~~~g~~v~~lNeLe~~-d-G~lyanvw~s~~I~vIDp~TG~ 212 (268)
T 3nok_A 167 --------LVGAVQVKLRGQPVELINELECA-N-GVIYANIWHSSDVLEIDPATGT 212 (268)
T ss_dssp --------EEEEEECEETTEECCCEEEEEEE-T-TEEEEEETTCSEEEEECTTTCB
T ss_pred --------EEEEEEeCCCCcccccccccEEe-C-CEEEEEECCCCeEEEEeCCCCc
Confidence 1111111 11 1244566665 4 6666555567789999988775
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=95.15 E-value=0.3 Score=30.30 Aligned_cols=84 Identities=8% Similarity=-0.003 Sum_probs=53.0
Q ss_pred CceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCC
Q psy14817 38 SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG 117 (138)
Q Consensus 38 ~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 117 (138)
...+.+..+.. ......++|++++.++++-..++.|..++..... . ... .....+..+++.++ ++
T Consensus 20 ~~~~~~~~~p~--~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~----------~-~~~-~~~~~p~gia~~~d-G~ 84 (306)
T 2p4o_A 20 APAKIITSFPV--NTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ----------Q-IHA-TVEGKVSGLAFTSN-GD 84 (306)
T ss_dssp CCEEEEEEECT--TCCEEEEEECTTSCEEEEETTTTEEEEECTTCCE----------E-EEE-ECSSEEEEEEECTT-SC
T ss_pred CCceEeEeCCC--CCCcceEEECCCCCEEEEeCCCCeEEEECCCCce----------E-EEE-eCCCCceeEEEcCC-Cc
Confidence 44566666654 2567899999998877776678889888875321 1 111 12246788999988 77
Q ss_pred EEEEEeCC-C-cEEEEEcCCC
Q psy14817 118 MLASCSDD-G-DVKLWQIKLE 136 (138)
Q Consensus 118 ~l~~~~~d-~-~v~~wd~~~~ 136 (138)
++++.... + .|..+|..++
T Consensus 85 l~vad~~~~~~~v~~~d~~~g 105 (306)
T 2p4o_A 85 LVATGWNADSIPVVSLVKSDG 105 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTS
T ss_pred EEEEeccCCcceEEEEcCCCC
Confidence 65554332 2 3555665554
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=95.02 E-value=0.34 Score=30.21 Aligned_cols=114 Identities=12% Similarity=0.032 Sum_probs=61.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEec---------C-------CCccCeEEEEEec-CC
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS---------G-------HHGRTIYDISWCH-LT 63 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-------~~~~~v~~v~~~~-~~ 63 (138)
+.++|+++.++..++.|..|+..... ........ + .....+.++++.+ ++
T Consensus 26 ~d~~g~~l~v~~~~~~i~~~~~~~~~-------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g 92 (322)
T 2fp8_A 26 FDSTNKGFYTSVQDGRVIKYEGPNSG-------------FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN 92 (322)
T ss_dssp CCTTCSSEEEECTTSEEEEECCTTTC-------------EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT
T ss_pred EcCCCCEEEEEcCCCeEEEECCCCCc-------------eEEEecccccccccccccccchhccccCCCCceEEEcCCCC
Confidence 35678877888888999999853211 11111000 0 0113578899997 55
Q ss_pred CeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeec-ccccceeEEEEcc-CCCCEEEEEeC-----------------
Q psy14817 64 DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR-AHNQDVNCVAWNP-VVPGMLASCSD----------------- 124 (138)
Q Consensus 64 ~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~~l~~~~~----------------- 124 (138)
.++++ ...+.+..++...+. ......... ........+++.+ + +.+.++-..
T Consensus 93 ~l~v~-d~~~~i~~~d~~~g~-------~~~~~~~~~~~~~~~p~~i~~d~~~-G~l~v~d~~~~~~~~~~~~~~~~~~~ 163 (322)
T 2fp8_A 93 QLYIV-DCYYHLSVVGSEGGH-------ATQLATSVDGVPFKWLYAVTVDQRT-GIVYFTDVSTLYDDRGVQQIMDTSDK 163 (322)
T ss_dssp EEEEE-ETTTEEEEECTTCEE-------CEEEESEETTEECSCEEEEEECTTT-CCEEEEESCSSCCTTCHHHHHHHTCC
T ss_pred cEEEE-ECCCCEEEEeCCCCE-------EEEecccCCCCcccccceEEEecCC-CEEEEECCcccccccccceehcccCC
Confidence 54444 334447777755321 000111111 1123567889988 7 776665432
Q ss_pred CCcEEEEEcCCC
Q psy14817 125 DGDVKLWQIKLE 136 (138)
Q Consensus 125 d~~v~~wd~~~~ 136 (138)
++.|..+|..++
T Consensus 164 ~g~v~~~d~~~~ 175 (322)
T 2fp8_A 164 TGRLIKYDPSTK 175 (322)
T ss_dssp CEEEEEEETTTT
T ss_pred CceEEEEeCCCC
Confidence 356777776543
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=94.99 E-value=0.36 Score=30.27 Aligned_cols=74 Identities=11% Similarity=-0.087 Sum_probs=44.6
Q ss_pred cCeEEEEEecCCCe-EEEeeCC-CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEE
Q psy14817 52 RTIYDISWCHLTDL-IATACGD-DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 129 (138)
Q Consensus 52 ~~v~~v~~~~~~~~-~~s~~~d-~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~ 129 (138)
.....++++|.+.. +++-... +.|...++.... ........-...+.+++.++.+.++.+-...+.|.
T Consensus 120 ~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~----------~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~ 189 (316)
T 1ijq_A 120 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD----------IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSIS 189 (316)
T ss_dssp CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC----------EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC----------eEEEEECCCCCceEEEEeccCCEEEEEECCCCeEE
Confidence 46789999986664 4443333 678777776432 11111122346788999987344444445567888
Q ss_pred EEEcCC
Q psy14817 130 LWQIKL 135 (138)
Q Consensus 130 ~wd~~~ 135 (138)
.+|+..
T Consensus 190 ~~d~dg 195 (316)
T 1ijq_A 190 SIDVNG 195 (316)
T ss_dssp EEETTS
T ss_pred EEecCC
Confidence 888764
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=94.63 E-value=0.41 Score=29.31 Aligned_cols=115 Identities=10% Similarity=0.131 Sum_probs=64.8
Q ss_pred ccCCC-eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 2 IQTGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 2 s~~~~-~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
.|++. ++++...++.|...|.. . +.+..+........-.|++.+++.++++.-.++.+.++++
T Consensus 35 ~~~~~~L~aV~d~~~~I~~ld~~--g--------------~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 35 SAQSNTLFSTINKPAAIVEMTTN--G--------------DLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp ETTTTEEEEEEETTEEEEEEETT--C--------------CEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eCCCCEEEEEECCCCeEEEEeCC--C--------------CEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 45554 55556677777777753 1 2233332212357788999888876666556678888888
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
................. ........-.++|.|. ++.|.++.......+|.++
T Consensus 99 ~~~~~i~~~~~~~~~~~-~~~~N~g~EGLA~d~~-~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQ-ESPTNCGFEGLAYSRQ-DHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp CTTCCEEEEEEEECCCS-SCCCSSCCEEEEEETT-TTEEEEEEESSSEEEEEEE
T ss_pred CCCCeeeeeeeeccccc-cccccCCcceEEEeCC-CCEEEEEECcCCceEEEEc
Confidence 75441000001100000 1123456789999998 7666666655455555543
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=94.30 E-value=0.57 Score=29.53 Aligned_cols=75 Identities=4% Similarity=-0.224 Sum_probs=45.1
Q ss_pred ccCeEEEEEecCCCeEEEee--CCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcE
Q psy14817 51 GRTIYDISWCHLTDLIATAC--GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 128 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~--~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v 128 (138)
......+++.|.+..++-+. ..+.|...++.... ........-...+.++++++++.++.+-...+.|
T Consensus 121 ~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~----------~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I 190 (318)
T 3sov_A 121 LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS----------RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFI 190 (318)
T ss_dssp CSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS----------CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC----------eEEEEECCCCCccEEEEeccCCEEEEEECCCCEE
Confidence 45678999998766444333 35678877776432 1111112234568899998734444555556778
Q ss_pred EEEEcCC
Q psy14817 129 KLWQIKL 135 (138)
Q Consensus 129 ~~wd~~~ 135 (138)
..+|+..
T Consensus 191 ~~~d~dG 197 (318)
T 3sov_A 191 HKSNLDG 197 (318)
T ss_dssp EEEETTS
T ss_pred EEEcCCC
Confidence 8888754
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=94.19 E-value=0.7 Score=30.12 Aligned_cols=74 Identities=15% Similarity=-0.015 Sum_probs=44.5
Q ss_pred ccCeEEEEEecCCCe-EEEeeC-CCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEE-EEEeCCCc
Q psy14817 51 GRTIYDISWCHLTDL-IATACG-DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGML-ASCSDDGD 127 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~-~~s~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~d~~ 127 (138)
......|+++|.+.. +.+-.. .+.|...++.... ........-...+.|++.++ ...| .+-.....
T Consensus 201 ~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~----------~~~~~~~~l~~P~glavd~~-~~~lY~aD~~~~~ 269 (400)
T 3p5b_L 201 GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD----------IYSLVTENIQWPNGITLDLL-SGRLYWVDSKLHS 269 (400)
T ss_dssp SCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS----------CEEEECSSCSCEEEEEEETT-TTEEEEEETTTTE
T ss_pred CCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc----------cEEEEECCCCceEEEEEEeC-CCEEEEEECCCCE
Confidence 345789999986664 444322 3678888776543 11121222356788999987 4444 44445667
Q ss_pred EEEEEcCC
Q psy14817 128 VKLWQIKL 135 (138)
Q Consensus 128 v~~wd~~~ 135 (138)
|..+|+..
T Consensus 270 I~~~d~dG 277 (400)
T 3p5b_L 270 ISSIDVNG 277 (400)
T ss_dssp EEEEETTS
T ss_pred EEEEeCCC
Confidence 88887754
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=93.95 E-value=0.31 Score=29.41 Aligned_cols=68 Identities=9% Similarity=-0.051 Sum_probs=39.2
Q ss_pred eEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEE
Q psy14817 54 IYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 129 (138)
Q Consensus 54 v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~ 129 (138)
..++.|.++|.+.++ .||.|.-++....... . ..-. -..+-...-..+..+.+.|+ +.+.+.. |+.+.
T Consensus 90 F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~-~-Wl~~-a~~vg~~gw~~~~~lff~p~-G~Lyav~--dg~ly 157 (236)
T 1tl2_A 90 FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTD-N-WIAR-ATEVGSGGWSGFKFLFFHPN-GYLYAVH--GQQFY 157 (236)
T ss_dssp CSEEEECTTSCEEEE--ETTEEEEESCCCSTTC-C-HHHH-SEEEECSSGGGEEEEEECTT-SCEEEEE--TTEEE
T ss_pred ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCC-c-eecc-ccEeccCCCCceEEEEECCC-ceEEEEe--CCcEE
Confidence 578899999998777 5688877665432200 0 0000 00001112246788999998 7777666 77653
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=93.77 E-value=0.68 Score=32.19 Aligned_cols=88 Identities=5% Similarity=-0.029 Sum_probs=50.0
Q ss_pred CCceEEeEEecCCCccCeEEEEEec-CCCeEEEeeCCC-----------cEEEEeccCCCCCCceeeeeeeeeeeccccc
Q psy14817 37 DSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATACGDD-----------AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 104 (138)
Q Consensus 37 ~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~s~~~d~-----------~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (138)
...|..+..+.. .-.+.++.+ ++.+++.|+.+. .+.+||+.... +.........+..
T Consensus 175 ~~~W~~~~~~P~----~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~-------w~~~~~~~~~~~~ 243 (656)
T 1k3i_A 175 LGRWGPTIDLPI----VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI-------VSDRTVTVTKHDM 243 (656)
T ss_dssp SCEEEEEEECSS----CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC-------BCCCEEEECSCCC
T ss_pred CCeeeeeccCCC----CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCc-------EEeCcccCCCCCC
Confidence 345665554433 112556666 777777766432 47788887654 0001111112223
Q ss_pred ceeEEEEccCCCCEEEEEeC-CCcEEEEEcCCC
Q psy14817 105 DVNCVAWNPVVPGMLASCSD-DGDVKLWQIKLE 136 (138)
Q Consensus 105 ~v~~~~~~~~~~~~l~~~~~-d~~v~~wd~~~~ 136 (138)
....+++.++ +.+++.|+. +..+.+||..+.
T Consensus 244 ~~~~~~~~~~-g~lyv~GG~~~~~v~~yd~~t~ 275 (656)
T 1k3i_A 244 FCPGISMDGN-GQIVVTGGNDAKKTSLYDSSSD 275 (656)
T ss_dssp SSCEEEECTT-SCEEEECSSSTTCEEEEEGGGT
T ss_pred ccccccCCCC-CCEEEeCCCCCCceEEecCcCC
Confidence 3345666777 888888884 567999998654
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=93.47 E-value=0.96 Score=29.29 Aligned_cols=73 Identities=10% Similarity=0.019 Sum_probs=41.5
Q ss_pred CeEEEEEecCCC-eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC-CcEEE
Q psy14817 53 TIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD-GDVKL 130 (138)
Q Consensus 53 ~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-~~v~~ 130 (138)
....+++.+.+. ++++-...+.|.+.++.... ........-.....+++.|..+.++.+-... +.|..
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~----------~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r 229 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH----------RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEA 229 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTSCS----------CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc----------eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEE
Confidence 456788887655 55555556778888776432 1111222334567888888723344443334 56776
Q ss_pred EEcCC
Q psy14817 131 WQIKL 135 (138)
Q Consensus 131 wd~~~ 135 (138)
.++..
T Consensus 230 ~~~dG 234 (386)
T 3v65_B 230 SSMDG 234 (386)
T ss_dssp EETTS
T ss_pred EeCCC
Confidence 66553
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.43 E-value=1.5 Score=31.51 Aligned_cols=75 Identities=12% Similarity=-0.053 Sum_probs=43.7
Q ss_pred ccCeEEEEEecCCC-eEEEeeCC-CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcE
Q psy14817 51 GRTIYDISWCHLTD-LIATACGD-DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 128 (138)
Q Consensus 51 ~~~v~~v~~~~~~~-~~~s~~~d-~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v 128 (138)
......|+++|... ++++-... +.|...++.... ...+....-...+.|++.+..+.++++-.....|
T Consensus 513 l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~----------~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I 582 (791)
T 3m0c_C 513 GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD----------IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 582 (791)
T ss_dssp TCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC----------EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc----------eEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcE
Confidence 34578999999765 44443233 678888776543 2222222334677888887623344443445667
Q ss_pred EEEEcCC
Q psy14817 129 KLWQIKL 135 (138)
Q Consensus 129 ~~wd~~~ 135 (138)
...++..
T Consensus 583 ~~~d~dG 589 (791)
T 3m0c_C 583 SSIDVNG 589 (791)
T ss_dssp EEEETTS
T ss_pred EEEecCC
Confidence 7777654
|
| >4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B | Back alignment and structure |
|---|
Probab=93.41 E-value=1.7 Score=31.95 Aligned_cols=32 Identities=9% Similarity=0.189 Sum_probs=27.6
Q ss_pred CeEEEEEecCCCeEEEeeCCCcEEEEeccCCC
Q psy14817 53 TIYDISWCHLTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 53 ~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
.+.++...++..++++-+.|+++|+|++..+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~ 268 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 268 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCC
Confidence 56777778888899999999999999998765
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=93.14 E-value=1.2 Score=29.44 Aligned_cols=76 Identities=8% Similarity=0.053 Sum_probs=39.5
Q ss_pred ccCeEEEEEecCCCeEEEeeCC---Cc-EEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCC
Q psy14817 51 GRTIYDISWCHLTDLIATACGD---DA-IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG 126 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d---~~-i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 126 (138)
......+++++++.++++-... .. +...+..... ... ... ..-.....+++.|..+.++++-..++
T Consensus 181 ~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~---~~~------~~~-~~~~~P~giavd~~~G~lyv~d~~~~ 250 (433)
T 4hw6_A 181 IGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF---TER------LSL-CNARGAKTCAVHPQNGKIYYTRYHHA 250 (433)
T ss_dssp CSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT---CCE------EEE-EECSSBCCCEECTTTCCEEECBTTCS
T ss_pred CCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe---ecc------ccc-cccCCCCEEEEeCCCCeEEEEECCCC
Confidence 4568899999999955554321 12 3333322111 000 000 12234566777774256555555666
Q ss_pred cEEEEEcCCC
Q psy14817 127 DVKLWQIKLE 136 (138)
Q Consensus 127 ~v~~wd~~~~ 136 (138)
.|..+|..++
T Consensus 251 ~V~~~d~~~g 260 (433)
T 4hw6_A 251 MISSYDPATG 260 (433)
T ss_dssp EEEEECTTTC
T ss_pred EEEEEECCCC
Confidence 7777776543
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=92.92 E-value=1.1 Score=28.53 Aligned_cols=74 Identities=9% Similarity=0.020 Sum_probs=44.3
Q ss_pred cCeEEEEEecCCC-eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC-CcEE
Q psy14817 52 RTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD-GDVK 129 (138)
Q Consensus 52 ~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-~~v~ 129 (138)
.....+++.+.+. ++++-...+.|.+.++.... ........-.....+++.|..+.++.+-... +.|.
T Consensus 116 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~----------~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~ 185 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH----------RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIE 185 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS----------CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc----------eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEE
Confidence 3456788887655 55555566789988887543 1111222334568889988634444444444 6677
Q ss_pred EEEcCC
Q psy14817 130 LWQIKL 135 (138)
Q Consensus 130 ~wd~~~ 135 (138)
..++..
T Consensus 186 r~~~dG 191 (349)
T 3v64_C 186 ASSMDG 191 (349)
T ss_dssp EEETTS
T ss_pred EEeCCC
Confidence 777654
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=92.32 E-value=1.2 Score=30.67 Aligned_cols=23 Identities=13% Similarity=0.083 Sum_probs=18.8
Q ss_pred CCCeEEEeeCCCcEEEEeccCCC
Q psy14817 62 LTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 62 ~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
.+..++.++.|+.|+.+|...++
T Consensus 474 ~gg~v~~g~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 474 KGGLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp TTTEEEEECTTSEEEEEETTTCC
T ss_pred CCCEEEEEcCCCeEEEEECCCCC
Confidence 45666678899999999998876
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=92.10 E-value=2.2 Score=29.93 Aligned_cols=73 Identities=11% Similarity=0.161 Sum_probs=43.4
Q ss_pred EEEEecCCCeEEEeeCCC-------------------cEEEEeccCCCCCCceeeeeeeeeeecccc-------cceeEE
Q psy14817 56 DISWCHLTDLIATACGDD-------------------AIRIFKENPEAGDSDMVSFDLVHTEHRAHN-------QDVNCV 109 (138)
Q Consensus 56 ~v~~~~~~~~~~s~~~d~-------------------~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~v~~~ 109 (138)
.+.+.+....++.+..++ .|.-+|...++ ..+.... ..|. .+....
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~-----~~W~~~~---~~~~~wd~~~~~~~~~~ 305 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGK-----LAWHYQV---TPGDSWDFTATQQITLA 305 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCC-----EEEEEES---STTCCSCCCCCSCEEEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCc-----eeeEeec---CCCccccccCCCCcEEE
Confidence 467788777777776655 37777877665 1121111 0111 222222
Q ss_pred EEccCCCC---EEEEEeCCCcEEEEEcCCCC
Q psy14817 110 AWNPVVPG---MLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 110 ~~~~~~~~---~l~~~~~d~~v~~wd~~~~~ 137 (138)
.+..+ +. .++.++.+|.+.++|..+++
T Consensus 306 d~~~~-G~~~~~v~~~~~~G~l~~lD~~tG~ 335 (668)
T 1kv9_A 306 ELNID-GKPRKVLMQAPKNGFFYVLDRTNGK 335 (668)
T ss_dssp EEEET-TEEEEEEEECCTTSEEEEEETTTCC
T ss_pred EeccC-CcEEEEEEEECCCCEEEEEECCCCC
Confidence 22234 43 68889999999999998876
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=91.97 E-value=1.6 Score=28.14 Aligned_cols=98 Identities=13% Similarity=0.046 Sum_probs=56.7
Q ss_pred CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC---C------------CcEEEE
Q psy14817 14 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG---D------------DAIRIF 78 (138)
Q Consensus 14 d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~---d------------~~i~i~ 78 (138)
+.+|.+|++... ......+..+.+......+.+.+.++|.++++... | ..-.+|
T Consensus 138 ~s~ielf~~d~~-----------~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vy 206 (355)
T 3sre_A 138 SSTVEVFKFQEE-----------EKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVT 206 (355)
T ss_dssp CCEEEEEEEETT-----------TTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEE
T ss_pred CCeEEEEEEECC-----------CCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEE
Confidence 456666665432 12234455665533457899999999987776531 1 122333
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEE-EEeCCCcEEEEEcC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA-SCSDDGDVKLWQIK 134 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~d~~v~~wd~~ 134 (138)
.+..++ ..... ..-...+.++|+|+ ++.+. +-+..+.|..|++.
T Consensus 207 r~d~~~----------~~~~~-~~l~~pNGia~spD-g~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 207 YYSPND----------VRVVA-EGFDFANGINISPD-GKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp EECTTC----------CEEEE-EEESSEEEEEECTT-SSEEEEEEGGGTEEEEEEEC
T ss_pred EEECCe----------EEEee-cCCcccCcceECCC-CCEEEEEeCCCCeEEEEEEC
Confidence 333222 11111 22346789999999 76554 44567889999875
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=90.59 E-value=2.9 Score=28.42 Aligned_cols=77 Identities=17% Similarity=0.258 Sum_probs=42.8
Q ss_pred CeEEEEE-------ecCCCeEEEeeCCC-------cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCE
Q psy14817 53 TIYDISW-------CHLTDLIATACGDD-------AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGM 118 (138)
Q Consensus 53 ~v~~v~~-------~~~~~~~~s~~~d~-------~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 118 (138)
....++| ++++..++.+...+ .+.+.+................. .-.....++.+|+.+.+
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~-----~~~~p~giavdp~~g~L 261 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA-----AYKQCNGATIHPINGEL 261 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE-----EESCCCCEEECTTTCCE
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeec-----cCCCceEEEEcCCCCeE
Confidence 5789999 99998555544432 25555533211000000000111 11244678889963666
Q ss_pred EEEEeCCCcEEEEEcC
Q psy14817 119 LASCSDDGDVKLWQIK 134 (138)
Q Consensus 119 l~~~~~d~~v~~wd~~ 134 (138)
+++-..++.|..+|+.
T Consensus 262 Yvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 262 YFNSYEKGQVFRLDLV 277 (496)
T ss_dssp EEEETTTTEEEEECHH
T ss_pred EEEECCCCEEEEEecc
Confidence 6666678889999876
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=90.25 E-value=2.2 Score=26.67 Aligned_cols=72 Identities=10% Similarity=0.064 Sum_probs=42.2
Q ss_pred cCeEEEEEecCCC-eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-C-CcE
Q psy14817 52 RTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-D-GDV 128 (138)
Q Consensus 52 ~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d-~~v 128 (138)
.....+++.+.+. ++++-...+.|.+.++.... ..............+++.|. +..++.+.. . +.|
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~----------~~~~~~~~~~~P~~iavdp~-~g~ly~~d~~~~~~I 145 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK----------RKTLFRENGSKPRAIVVDPV-HGFMYWTDWGTPAKI 145 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS----------EEEEEECTTCCEEEEEEETT-TTEEEEEECSSSCEE
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCc----------eEEEEECCCCCcceEEeCCC-CCEEEEEccCCCCeE
Confidence 3457888887555 55555567789998876432 11111122346678888886 444433333 2 567
Q ss_pred EEEEcC
Q psy14817 129 KLWQIK 134 (138)
Q Consensus 129 ~~wd~~ 134 (138)
...++.
T Consensus 146 ~~~~~d 151 (316)
T 1ijq_A 146 KKGGLN 151 (316)
T ss_dssp EEEETT
T ss_pred EEEcCC
Confidence 666654
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=89.97 E-value=1.2 Score=31.53 Aligned_cols=70 Identities=10% Similarity=-0.006 Sum_probs=34.4
Q ss_pred eEEEEEecCCC-eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC-CcEEEE
Q psy14817 54 IYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD-GDVKLW 131 (138)
Q Consensus 54 v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-~~v~~w 131 (138)
...|++.+.+. ++++-...+.|.+.++.... ...+..........+++.|..+.++++-... +.|...
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~----------~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~ 524 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK----------RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 524 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC----------EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBC
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCc----------eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEE
Confidence 44577775444 55554456778888876433 1111111223456677776523333332222 455555
Q ss_pred Ec
Q psy14817 132 QI 133 (138)
Q Consensus 132 d~ 133 (138)
++
T Consensus 525 ~~ 526 (699)
T 1n7d_A 525 GL 526 (699)
T ss_dssp CS
T ss_pred eC
Confidence 44
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.46 E-value=4.6 Score=29.15 Aligned_cols=73 Identities=10% Similarity=0.043 Sum_probs=43.4
Q ss_pred cCeEEEEEecCCC-eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-C-CcE
Q psy14817 52 RTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-D-GDV 128 (138)
Q Consensus 52 ~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d-~~v 128 (138)
.....|++.+.+. ++++-...+.|.+.++.... ...+....-.....|++.|. ...|+.+.. . +.|
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~----------~~~l~~~~l~~P~gIaVDp~-~g~LYwtD~g~~~~I 539 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK----------RKTLFRENGSKPRAIVVDPV-HGFMYWTDWGTPAKI 539 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS----------EEEEEECTTCCEEEEEEETT-TTEEEEEECSSSCEE
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe----------EEEEEeCCCCCcceEEEecC-CCCEEEecCCCCCeE
Confidence 4566888888775 55555567789998887543 22222223345778888886 444444332 2 556
Q ss_pred EEEEcCC
Q psy14817 129 KLWQIKL 135 (138)
Q Consensus 129 ~~wd~~~ 135 (138)
...++..
T Consensus 540 ~~~~~dG 546 (791)
T 3m0c_C 540 KKGGLNG 546 (791)
T ss_dssp EEEETTS
T ss_pred EEEecCC
Confidence 6666543
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=89.41 E-value=3 Score=28.78 Aligned_cols=23 Identities=22% Similarity=0.390 Sum_probs=19.2
Q ss_pred CCCeEEEeeCCCcEEEEeccCCC
Q psy14817 62 LTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 62 ~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
.+.+++.++.|+.++.+|.+.++
T Consensus 496 agglvf~g~~dg~l~A~D~~tG~ 518 (582)
T 1flg_A 496 AGNLVFTGTGDGYFKAFDAKSGK 518 (582)
T ss_dssp TTTEEEEECTTSEEEEEETTTCC
T ss_pred CCCEEEEECCCCcEEEEECCCCC
Confidence 35677778999999999999876
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=89.16 E-value=3.6 Score=27.46 Aligned_cols=108 Identities=7% Similarity=-0.009 Sum_probs=53.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC-----CCccCeEEEEEecC---CC-eEEEeeC
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-----HHGRTIYDISWCHL---TD-LIATACG 71 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~v~~~~~---~~-~~~s~~~ 71 (138)
|.|+|+++++-...+.|++++..... ...+..+.. ........|+|+|+ +. ++++-+.
T Consensus 34 ~~pdG~l~V~e~~gg~I~~~~~~~g~-------------~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~ 100 (454)
T 1cru_A 34 WGPDNQIWLTERATGKILRVNPESGS-------------VKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTF 100 (454)
T ss_dssp ECTTSCEEEEETTTCEEEEECTTTCC-------------EEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred EcCCCcEEEEEcCCCEEEEEECCCCc-------------EeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEec
Confidence 45889888876554567777632111 122222221 02456789999995 44 4444332
Q ss_pred ------------CCcEEEEeccCCCCCCceeeeeeeee-eecccccceeEEEEccCCCCEEEEEeC
Q psy14817 72 ------------DDAIRIFKENPEAGDSDMVSFDLVHT-EHRAHNQDVNCVAWNPVVPGMLASCSD 124 (138)
Q Consensus 72 ------------d~~i~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~ 124 (138)
...|.-+++..... .......+.. ...........|.|.|+ +.++++.+.
T Consensus 101 ~~~~~~~~~~~~~~~v~r~~~~~~~~--~~~~~~~i~~~~p~~~~H~~~~l~f~pD-G~Lyv~~Gd 163 (454)
T 1cru_A 101 KNPKSTDKELPNQTIIRRYTYNKSTD--TLEKPVDLLAGLPSSKDHQSGRLVIGPD-QKIYYTIGD 163 (454)
T ss_dssp ECTTC--CCSCEEEEEEEEEEETTTT--EEEEEEEEEEEECCCSSCCEEEEEECTT-SCEEEEECC
T ss_pred cccCCCccccccccEEEEEEECCCCC--CcCCcEEEEEcCCCCCCCCCCeEeECCC-CeEEEEECC
Confidence 12455555443221 1111111111 11122235788999999 877766543
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.85 E-value=2.8 Score=25.78 Aligned_cols=21 Identities=19% Similarity=0.305 Sum_probs=14.7
Q ss_pred CCEEEEEeCCC-----cEEEEEcCCC
Q psy14817 116 PGMLASCSDDG-----DVKLWQIKLE 136 (138)
Q Consensus 116 ~~~l~~~~~d~-----~v~~wd~~~~ 136 (138)
+.+++.|+.++ .+.+||+.+.
T Consensus 252 ~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 252 GLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp TEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CEEEEECCcCCCcccccEEEEcCCCC
Confidence 67777777653 4788887654
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=88.01 E-value=3.7 Score=26.21 Aligned_cols=102 Identities=10% Similarity=0.076 Sum_probs=52.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEec--CCCccCeEEEEEecC---CC-eEEEeeCC--
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS--GHHGRTIYDISWCHL---TD-LIATACGD-- 72 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~v~~~~~---~~-~~~s~~~d-- 72 (138)
|.|+|+++++- .++.|.+++ .. . ...+..+. .........|+++|+ +. ++++-...
T Consensus 38 ~~pdG~l~V~e-~~g~I~~i~--~g-~------------~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~ 101 (352)
T 2ism_A 38 FLPDGGMLIAE-RPGRIRLFR--EG-R------------LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEG 101 (352)
T ss_dssp ECTTSCEEEEE-TTTEEEEEE--TT-E------------EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTT
T ss_pred EcCCCeEEEEe-CCCeEEEEE--CC-C------------ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCC
Confidence 46888866654 558888887 11 1 12222221 112456789999998 44 44443322
Q ss_pred ---CcEEEEeccCCCCCCceeeeeeeee-ee--cccccceeEEEEccCCCCEEEEEe
Q psy14817 73 ---DAIRIFKENPEAGDSDMVSFDLVHT-EH--RAHNQDVNCVAWNPVVPGMLASCS 123 (138)
Q Consensus 73 ---~~i~i~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~v~~~~~~~~~~~~l~~~~ 123 (138)
..|..++..... ......... .. .........+.|.|+ +.++++.+
T Consensus 102 ~~~~~v~r~~~~~~~----~~~~~~l~~~~p~~~~~~h~~~~l~~~pd-G~Lyv~~G 153 (352)
T 2ism_A 102 GLRNQVVRLRHLGER----GVLDRVVLDGIPARPHGLHSGGRIAFGPD-GMLYVTTG 153 (352)
T ss_dssp SSEEEEEEEEECSSC----EEEEEEEEEEECCCTTCCCCCCCEEECTT-SCEEEECC
T ss_pred CCccEEEEEEeCCCC----cCceEEEEEeCCCCCCCCcCCceEEECCC-CCEEEEEC
Confidence 567777765321 101111111 11 111123468999998 77666643
|
| >2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=87.65 E-value=2.8 Score=26.92 Aligned_cols=109 Identities=8% Similarity=0.017 Sum_probs=55.8
Q ss_pred CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEe---cCCCeEEEe-eCCCcEEEEecc
Q psy14817 6 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC---HLTDLIATA-CGDDAIRIFKEN 81 (138)
Q Consensus 6 ~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~---~~~~~~~s~-~~d~~i~i~~~~ 81 (138)
..++.++.||.|.-.|.... +.+..+......++....-. .++..++.. ..||.|..++..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG---------------~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~ 75 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNG---------------HIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAH 75 (339)
T ss_dssp EEEEEEETTSCEEEEETTTT---------------EEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETT
T ss_pred CEEEEEeCCCeEEEEECCCC---------------cEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECC
Confidence 46778899999999996433 33444433101122221100 122233333 578888888876
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEc---------cCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN---------PVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---------~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.+. ..+....... -...++.. .-. .. ...+++++.++.+.-.|+++++
T Consensus 76 ~G~-----~~~~~~~~~l-v~~SP~~~-~~~pvv~~~~~~~~-~g~Vy~Gs~~g~l~ald~~tG~ 132 (339)
T 2be1_A 76 QGL-----QKLPLSIRQL-VSTSPLHL-KTNIVVNDSGKIVE-DEKVYTGSMRTIMYTINMLNGE 132 (339)
T ss_dssp TEE-----EEEEEEHHHH-HTTCSEEE-ECC----------C-CEEEEECEEEEEEEEEETTTCC
T ss_pred CCc-----EEeeeccccc-eecccccc-CCCceeeccccccc-CCEEEEEecCCEEEEEECCCCc
Confidence 542 1111111100 01112221 100 02 5678889999999999988876
|
| >4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B | Back alignment and structure |
|---|
Probab=87.61 E-value=6.9 Score=28.91 Aligned_cols=32 Identities=13% Similarity=0.126 Sum_probs=27.0
Q ss_pred ceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 105 DVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 105 ~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.+.++...++ ..++++.+.|+++|+|++.+++
T Consensus 237 ~~~~~~~~~~-~~~lftl~~D~~LRiWsl~t~~ 268 (950)
T 4gq2_M 237 TIISMIFLST-YNVLVMLSLDYKLKVLDLSTNQ 268 (950)
T ss_dssp CEEEEEEETT-TTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEEeecCC-CcEEEEEECCCEEEEEECCCCC
Confidence 5666777777 8899999999999999998875
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=87.18 E-value=4.3 Score=26.02 Aligned_cols=104 Identities=8% Similarity=-0.012 Sum_probs=52.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEec--CCCccCeEEEEEecC---CC-eEEEeeC---
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS--GHHGRTIYDISWCHL---TD-LIATACG--- 71 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~v~~~~~---~~-~~~s~~~--- 71 (138)
|.|+|+++++- .++.|++++.. . . +.+..+. .........|+++|+ +. ++++-..
T Consensus 36 ~~pdG~l~V~e-~~g~I~~~d~~-G-------------~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~ 99 (354)
T 3a9g_A 36 PLGGGRYLVTE-RPGRLVLISPS-G-------------K-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAE 99 (354)
T ss_dssp EEETTEEEEEE-TTTEEEEECSS-C-------------E-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECG
T ss_pred EcCCCeEEEEe-CCCEEEEEeCC-C-------------c-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCC
Confidence 35788866654 45888888621 0 1 2222221 112346789999997 44 4444332
Q ss_pred C----CcEEEEeccCCCCCCceeeeeeeee-eecccccceeEEEEccCCCCEEEEEe
Q psy14817 72 D----DAIRIFKENPEAGDSDMVSFDLVHT-EHRAHNQDVNCVAWNPVVPGMLASCS 123 (138)
Q Consensus 72 d----~~i~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~ 123 (138)
+ ..|..++....... ......+.. ...........|.|.|+ +.++++.+
T Consensus 100 ~~~~~~~v~r~~~~~~~~~--~~~~~~l~~~~~~~~~h~~~~l~~~pD-G~Lyvt~G 153 (354)
T 3a9g_A 100 GGHIRNRVIRGRLDGSTFK--LKEVKTLIDGIPGAYIHNGGRIRFGPD-GMLYITTG 153 (354)
T ss_dssp GGCEEEEEEEEEECSSSCC--EEEEEEEEEEEECCSSCCCCCEEECTT-SCEEEECC
T ss_pred CCCcceEEEEEEECCCCcC--cCccEEEEEcCCCCCCcCCceEEECCC-CcEEEEEC
Confidence 2 45666666543101 111111111 11111223567999998 87666643
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.95 E-value=3.7 Score=25.14 Aligned_cols=64 Identities=8% Similarity=0.124 Sum_probs=32.1
Q ss_pred CCCeEEEeeCC-----CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC-----CcEEEE
Q psy14817 62 LTDLIATACGD-----DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD-----GDVKLW 131 (138)
Q Consensus 62 ~~~~~~s~~~d-----~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----~~v~~w 131 (138)
++.+++.|+.+ ..+.+||+.... +....... ........+.+ + +.+++.|+.+ ..+.+|
T Consensus 206 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~-------W~~~~~~p-~~r~~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~y 274 (301)
T 2vpj_A 206 NDHIYVVGGFDGTAHLSSVEAYNIRTDS-------WTTVTSMT-TPRCYVGATVL--R-GRLYAIAGYDGNSLLSSIECY 274 (301)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTE-------EEEECCCS-SCCBSCEEEEE--T-TEEEEECCBCSSSBEEEEEEE
T ss_pred CCEEEEEeCCCCCcccceEEEEeCCCCc-------EEECCCCC-CcccceeEEEE--C-CEEEEEcCcCCCcccccEEEE
Confidence 45666666553 358888887543 11111111 11111112222 4 6677777765 356778
Q ss_pred EcCCC
Q psy14817 132 QIKLE 136 (138)
Q Consensus 132 d~~~~ 136 (138)
|+.+.
T Consensus 275 d~~~~ 279 (301)
T 2vpj_A 275 DPIID 279 (301)
T ss_dssp ETTTT
T ss_pred cCCCC
Confidence 87654
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=86.77 E-value=2.6 Score=29.35 Aligned_cols=78 Identities=10% Similarity=-0.064 Sum_probs=46.7
Q ss_pred CccCCCeEEEee-CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
++|||++++.++ .+.++.++++........... .......+.... -.......+|.++|....+.-.|..|.-|+
T Consensus 330 vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~--~~~~~~~~ae~e--~GlGPlHt~Fd~~G~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 330 TSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKL--ADPRDVIVGEPE--LGLGPLHTTFDGRGNAYTTLFIDSQVVKWN 405 (638)
T ss_dssp ECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCC--SCGGGGEEECCB--CCSCEEEEEECSSSEEEEEETTTTEEEEEE
T ss_pred eCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccc--cCcccceEeecc--CCCcccEEEECCCCceEeeeeecceEEEEe
Confidence 479999777554 588999999864211000000 000111122222 234567889999996666666899999999
Q ss_pred ccC
Q psy14817 80 ENP 82 (138)
Q Consensus 80 ~~~ 82 (138)
+..
T Consensus 406 i~~ 408 (638)
T 3sbq_A 406 MEE 408 (638)
T ss_dssp HHH
T ss_pred ccH
Confidence 985
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=86.11 E-value=5.2 Score=25.94 Aligned_cols=113 Identities=12% Similarity=0.108 Sum_probs=68.1
Q ss_pred eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCC
Q psy14817 7 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 86 (138)
Q Consensus 7 ~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~ 86 (138)
+++....+|.+..|++..... .....+.+.++.. ...+-.+...+....++.+-.+.-|..++.+.....
T Consensus 145 yafV~~k~G~~~q~~l~~~~~--------g~~~~~lVR~f~l--gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~ 214 (355)
T 3amr_A 145 YAMVTGKEGEFEQYELKADKN--------GYISGKKVRAFKM--NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGS 214 (355)
T ss_dssp EEEEECSSSEEEEEEEEECTT--------SCEEEEEEEEEEC--SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCS
T ss_pred EEEEECCCCeEEEEEEEeCCC--------CcccceEEEEecC--CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCC
Confidence 577777889999999854221 0123466777765 457888888988888888888865555554432211
Q ss_pred Cceeeeeeeeeeecc-cccceeEEEE--ccCCCC-EEEEEe-CCCcEEEEEcC
Q psy14817 87 SDMVSFDLVHTEHRA-HNQDVNCVAW--NPVVPG-MLASCS-DDGDVKLWQIK 134 (138)
Q Consensus 87 ~~~~~~~~~~~~~~~-~~~~v~~~~~--~~~~~~-~l~~~~-~d~~v~~wd~~ 134 (138)
... .+.....+ -...+-.|++ .++ +. +|+.++ .+.++.+||..
T Consensus 215 ~~~----~v~~~~~g~l~aDvEGLai~~~~~-g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 215 NGT----VIDRADGRHLTRDIEGLTIYYAAD-GKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp CCE----EEEEBSSSSBCSCEEEEEEEECGG-GCEEEEEEEGGGTEEEEEESS
T ss_pred Cce----EEEEecCCccccCcceEEEEecCC-CCEEEEEEcCCCCEEEEEECC
Confidence 011 11111112 2236777777 444 44 555555 57799999986
|
| >4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-} | Back alignment and structure |
|---|
Probab=85.53 E-value=0.64 Score=34.74 Aligned_cols=32 Identities=13% Similarity=0.126 Sum_probs=25.8
Q ss_pred ceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 105 DVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 105 ~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.+.++...++ ..++++.+.|+++|+|++.+++
T Consensus 239 ~~vs~~~~~~-~~~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 239 TIISMIFLST-YNVLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp CBSCCEEETT-TTEEEEEBTTCEEEEEETTTTE
T ss_pred eeEEeeccCC-ccEEEEEeCCCEEEEEECCCCC
Confidence 4445555666 7899999999999999998875
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=84.08 E-value=7.1 Score=25.81 Aligned_cols=65 Identities=14% Similarity=0.110 Sum_probs=37.8
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEeccC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENP 82 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~ 82 (138)
+|.++++-..++.|+.++..... ....+..... ......++++|++. ++++-...+.|+.+++..
T Consensus 239 ~G~lyv~d~~~~~V~~~d~~~g~------------~~~~~~~~~~--~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~ 304 (433)
T 4hw6_A 239 NGKIYYTRYHHAMISSYDPATGT------------LTEEEVMMDT--KGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNR 304 (433)
T ss_dssp TCCEEECBTTCSEEEEECTTTCC------------EEEEEEECSC--CSSCEEEEECTTSSEEEEEETTTTEEEEEEBCT
T ss_pred CCeEEEEECCCCEEEEEECCCCe------------EEEEEeccCC--CCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCC
Confidence 56666666667777777753110 0011211111 22335799999998 555555667899988763
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=83.84 E-value=6.5 Score=27.54 Aligned_cols=81 Identities=5% Similarity=-0.067 Sum_probs=51.6
Q ss_pred cCeEEEEEecCCCeEE-EeeCCCcEEEEeccCCCC----CCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCC
Q psy14817 52 RTIYDISWCHLTDLIA-TACGDDAIRIFKENPEAG----DSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG 126 (138)
Q Consensus 52 ~~v~~v~~~~~~~~~~-s~~~d~~i~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 126 (138)
...+.+..+|+|++++ ++-.+.++.++++..... ....+.- ...... .-.......+|.++ +.-..+---|.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~-~~~ae~-e~GlGPlHt~Fd~~-G~aYTtlfidS 399 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRD-VIVGEP-ELGLGPLHTTFDGR-GNAYTTLFIDS 399 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGG-GEEECC-BCCSCEEEEEECSS-SEEEEEETTTT
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCccc-ceEeec-cCCCcccEEEECCC-CceEeeeeecc
Confidence 3556889999999655 455788999999984210 0000000 011111 23356778899998 76666667899
Q ss_pred cEEEEEcCC
Q psy14817 127 DVKLWQIKL 135 (138)
Q Consensus 127 ~v~~wd~~~ 135 (138)
.|.-|++..
T Consensus 400 qvvkWni~~ 408 (638)
T 3sbq_A 400 QVVKWNMEE 408 (638)
T ss_dssp EEEEEEHHH
T ss_pred eEEEEeccH
Confidence 999999753
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=83.54 E-value=7.2 Score=25.42 Aligned_cols=74 Identities=9% Similarity=0.043 Sum_probs=43.9
Q ss_pred ccCeEEEEEecCCC-eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe-C-CCc
Q psy14817 51 GRTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS-D-DGD 127 (138)
Q Consensus 51 ~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~-d~~ 127 (138)
......+++.+.+. ++++-...+.|.+.++.... ........-.....+++.|. ...|+.+. . .+.
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~----------~~~l~~~~~~~P~~iavdp~-~g~ly~td~~~~~~ 226 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK----------RKTLFRENGSKPRAIVVDPV-HGFMYWTDWGTPAK 226 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCS----------EEEEEECSSCCEEEEEEETT-TTEEEEEECSSSCC
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCc----------eEEEEeCCCCCcceEEEecc-cCeEEEEeCCCCCE
Confidence 34677899988554 55555566788888877543 22222223345678888886 44444333 2 356
Q ss_pred EEEEEcCC
Q psy14817 128 VKLWQIKL 135 (138)
Q Consensus 128 v~~wd~~~ 135 (138)
|...++..
T Consensus 227 I~~~~~dG 234 (400)
T 3p5b_L 227 IKKGGLNG 234 (400)
T ss_dssp EEEEETTS
T ss_pred EEEEeCCC
Confidence 77766653
|
| >4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-} | Back alignment and structure |
|---|
Probab=83.12 E-value=3.6 Score=30.94 Aligned_cols=32 Identities=9% Similarity=0.189 Sum_probs=25.8
Q ss_pred CeEEEEEecCCCeEEEeeCCCcEEEEeccCCC
Q psy14817 53 TIYDISWCHLTDLIATACGDDAIRIFKENPEA 84 (138)
Q Consensus 53 ~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~ 84 (138)
.+.++...++..++++-+.|+++|+|++..+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCC
Confidence 34455666777899999999999999998764
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=83.12 E-value=5.8 Score=24.08 Aligned_cols=74 Identities=8% Similarity=-0.094 Sum_probs=40.2
Q ss_pred cCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEE
Q psy14817 52 RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 131 (138)
Q Consensus 52 ~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~w 131 (138)
..+..++|+|++.+.+. .++.+.-.+..... .....- ....+-..--....++-|.|+ +.+.++ .||.|.-+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~--~~~W~~-s~t~IG~~Gw~~F~a~~fD~~-G~LYav--~dG~iyr~ 112 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHD--NDNWMG-RAKKIGNGGWNQFQFLFFDPN-GYLYAV--SKDKLYKA 112 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCST--TCCHHH-HCEEEECSCGGGCSEEEECTT-SCEEEE--ETTEEEEE
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCC--cccccc-cccEecccccccceEEEECCC-CCEEEe--CCCEEEEe
Confidence 36679999998886665 66765554443221 000000 000110001112477888888 777777 56888766
Q ss_pred Ec
Q psy14817 132 QI 133 (138)
Q Consensus 132 d~ 133 (138)
+.
T Consensus 113 ~p 114 (236)
T 1tl2_A 113 SP 114 (236)
T ss_dssp SC
T ss_pred CC
Confidence 54
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=82.85 E-value=7.4 Score=25.07 Aligned_cols=109 Identities=13% Similarity=0.065 Sum_probs=55.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEec---CCCccCeEEEEEecC----CCeEEEe--eC
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS---GHHGRTIYDISWCHL----TDLIATA--CG 71 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~v~~~~~----~~~~~s~--~~ 71 (138)
|.|+|+++++-...|.|++++..... ...+..+. .........|+++|+ +.++++- ..
T Consensus 39 ~~pdG~llVter~~G~I~~v~~~~g~-------------~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 39 PLPGGDLLVSSRDEATITRVDAKTGR-------------KTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp ECTTSCEEEEETTTCEEEEECTTTCC-------------EEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred EcCCCcEEEEEecCCEEEEEECCCCc-------------EeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 46889988877668888888742211 12222221 113456789999995 3343332 23
Q ss_pred CCcEEEEeccCCCCC-Cceeeeeeee-eeecccccceeEEEEccCCCCEEEEEe
Q psy14817 72 DDAIRIFKENPEAGD-SDMVSFDLVH-TEHRAHNQDVNCVAWNPVVPGMLASCS 123 (138)
Q Consensus 72 d~~i~i~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~ 123 (138)
+..|.-|.+...... ........+. ............|.|.|+ +.++++.+
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpD-G~Lyvt~G 158 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPD-KMLYAGTG 158 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTT-SCEEEECB
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCC-CCEEEEEC
Confidence 445555555432100 0000011111 111112224567999998 87777654
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=82.31 E-value=14 Score=28.04 Aligned_cols=72 Identities=14% Similarity=0.204 Sum_probs=43.6
Q ss_pred cCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCC-----CCEEEEEeC-C
Q psy14817 52 RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV-----PGMLASCSD-D 125 (138)
Q Consensus 52 ~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~~~l~~~~~-d 125 (138)
..|...+.+. .+++.+. .+.+.++++..+. .. .... ..-...|.++++.|.. ..+++.|.. |
T Consensus 514 ~~I~~As~n~--~~vvva~-g~~l~~fel~~~~----L~---~~~~--~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d 581 (1158)
T 3ei3_A 514 KNISVASCNS--SQVVVAV-GRALYYLQIHPQE----LR---QISH--TEMEHEVACLDITPLGDSNGLSPLCAIGLWTD 581 (1158)
T ss_dssp CCCCEEEECS--SEEEEEE-TTEEEEEEEETTE----EE---EEEE--EECSSCEEEEECCCCSSSTTCCSEEEEEETTT
T ss_pred CEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCc----ee---eecc--cCCCCceEEEEeecCCCCcccccEEEEEECCC
Confidence 3565555442 3444444 5667777776421 10 0111 1234579999987641 468899997 9
Q ss_pred CcEEEEEcCC
Q psy14817 126 GDVKLWQIKL 135 (138)
Q Consensus 126 ~~v~~wd~~~ 135 (138)
++++++++..
T Consensus 582 ~tv~I~sL~~ 591 (1158)
T 3ei3_A 582 ISARILKLPS 591 (1158)
T ss_dssp TEEEEEETTT
T ss_pred CEEEEEECCC
Confidence 9999999865
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=82.21 E-value=10 Score=26.37 Aligned_cols=19 Identities=11% Similarity=0.106 Sum_probs=15.8
Q ss_pred EEEeeCCCcEEEEeccCCC
Q psy14817 66 IATACGDDAIRIFKENPEA 84 (138)
Q Consensus 66 ~~s~~~d~~i~i~~~~~~~ 84 (138)
++.++.|+.|.-+|...++
T Consensus 124 V~v~t~dg~l~AlDa~TG~ 142 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGE 142 (599)
T ss_dssp EEEECTTSEEEEEETTTCC
T ss_pred EEEEcCCCEEEEEECCCCC
Confidence 7778888999999988776
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=81.81 E-value=12 Score=26.75 Aligned_cols=104 Identities=8% Similarity=0.018 Sum_probs=55.9
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEec-CCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccC
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 82 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~ 82 (138)
+|+.|..|+.++-|..++...... +...... ......|.++...+++.+.+.. .+ -+..|+...
T Consensus 416 ~g~~lWigt~~~Gl~~~d~~~~~~-------------~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~ 480 (795)
T 4a2l_A 416 KKSLVYIGTHAGGLSILHRNSGQV-------------ENFNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQ 480 (795)
T ss_dssp TTTEEEEEETTTEEEEEETTTCCE-------------EEECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTT
T ss_pred CCCEEEEEeCcCceeEEeCCCCcE-------------EEeecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCC
Confidence 444355567767788888533211 1111000 0124578899888877755544 34 488888765
Q ss_pred CCCCCceeeeeeeeeee------cccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 83 EAGDSDMVSFDLVHTEH------RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 83 ~~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
.. ..... .-....|.++...++ +.+.+... + -|..||..+
T Consensus 481 ~~----------~~~~~~~~~~~~~~~~~i~~i~~d~~-g~lWigt~-~-Gl~~~~~~~ 526 (795)
T 4a2l_A 481 RS----------FTTIEKEKDGTPVVSKQITTLFRDSH-KRLWIGGE-E-GLSVFKQEG 526 (795)
T ss_dssp TE----------EEECCBCTTCCBCCCCCEEEEEECTT-CCEEEEES-S-CEEEEEEET
T ss_pred Ce----------EEEccccccccccCCceEEEEEECCC-CCEEEEeC-C-ceEEEeCCC
Confidence 43 11111 012356788877776 66555443 4 477777654
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=81.27 E-value=19 Score=28.59 Aligned_cols=104 Identities=13% Similarity=0.124 Sum_probs=56.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~ 79 (138)
|+|..+.+|--. ..++.|||+....+ ++.+.- ..+|...+|-.... -++| +..|..|+
T Consensus 73 MnP~~~iiALra-g~~lQiFnl~~k~k---------------lks~~~--~e~VvfWkWis~~~l~lVT---~~aVyHW~ 131 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQIFNIEMKSK---------------MKAHTM--TDDVTFWKWISLNTVALVT---DNAVYHWS 131 (1630)
T ss_pred cCCCcceEEEec-CCeEEEeehHHhhh---------------hccccc--CCCceEEEecCCCeeEEEc---CCeEEEec
Confidence 456666666554 56777777654332 333322 35677788865444 2333 45799999
Q ss_pred ccCCCCCCceeeeeeeeeeeccc----ccceeEEEEccCCCCEEEEEe-------CCCcEEEEEcCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAH----NQDVNCVAWNPVVPGMLASCS-------DDGDVKLWQIKL 135 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~-------~d~~v~~wd~~~ 135 (138)
+..... +...+..| ...|..-+.+++ ..+++..+ ..|.+.+|....
T Consensus 132 ~~~~s~---------P~k~fdR~~~L~~~QIinY~~d~~-~kW~~l~gi~~~~~~v~G~mQLyS~er 188 (1630)
T 1xi4_A 132 MEGESQ---------PVKMFDRHSSLAGCQIINYRTDAK-QKWLLLTGISAQQNRVVGAMQLYSVDR 188 (1630)
T ss_pred cCCCCc---------cHHHHhcchhcccCeeEEeeeCCC-CCeEEEEeeccCCCcccceeeeeeccc
Confidence 975331 11111111 345656666676 66665333 346677776543
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=80.35 E-value=8 Score=23.85 Aligned_cols=21 Identities=19% Similarity=0.292 Sum_probs=14.4
Q ss_pred CCEEEEEeCC-----CcEEEEEcCCC
Q psy14817 116 PGMLASCSDD-----GDVKLWQIKLE 136 (138)
Q Consensus 116 ~~~l~~~~~d-----~~v~~wd~~~~ 136 (138)
+.+++.|+.+ ..+.+||+.+.
T Consensus 216 ~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 216 NCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp TEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CEEEEEeCCCCCCccceEEEEeCCCC
Confidence 6677777654 45888887654
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=80.26 E-value=14 Score=26.45 Aligned_cols=73 Identities=10% Similarity=0.067 Sum_probs=45.4
Q ss_pred ccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeec----ccccceeEEEEccCCCCEEEEEeCCC
Q psy14817 51 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR----AHNQDVNCVAWNPVVPGMLASCSDDG 126 (138)
Q Consensus 51 ~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~~~~~d~ 126 (138)
...|.++...+++..+..|+.++-|..++...+. ...... .....|.++...++ +.+.+.. .+
T Consensus 405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~----------~~~~~~~~~~l~~~~v~~i~~d~~-g~lwigt-~~- 471 (795)
T 4a2l_A 405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ----------VENFNQRNSQLVNENVYAILPDGE-GNLWLGT-LS- 471 (795)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC----------EEEECTTTSCCSCSCEEEEEECSS-SCEEEEE-SS-
T ss_pred CccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc----------EEEeecCCCCcCCCeeEEEEECCC-CCEEEEe-cC-
Confidence 3578899888888745556666668889877654 111110 12356788877666 6655444 34
Q ss_pred cEEEEEcCCC
Q psy14817 127 DVKLWQIKLE 136 (138)
Q Consensus 127 ~v~~wd~~~~ 136 (138)
-|..||..++
T Consensus 472 Gl~~~~~~~~ 481 (795)
T 4a2l_A 472 ALVRFNPEQR 481 (795)
T ss_dssp CEEEEETTTT
T ss_pred ceeEEeCCCC
Confidence 4777877654
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=80.12 E-value=12 Score=25.56 Aligned_cols=77 Identities=5% Similarity=-0.105 Sum_probs=44.9
Q ss_pred eEEEEEecCCC-eEEEeeCCCcEEEEecc-------CCCCCCc--ee---eeeeeeeeecccccceeEEEEccCCCCE-E
Q psy14817 54 IYDISWCHLTD-LIATACGDDAIRIFKEN-------PEAGDSD--MV---SFDLVHTEHRAHNQDVNCVAWNPVVPGM-L 119 (138)
Q Consensus 54 v~~v~~~~~~~-~~~s~~~d~~i~i~~~~-------~~~~~~~--~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~-l 119 (138)
...++.+|++. ++++-..++.|..+|+. .+..... .. ...... ..........++|+|+ ++. +
T Consensus 249 p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~--~~~~~~~p~~ia~~p~-G~~lY 325 (496)
T 3kya_A 249 CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLF--TIADPSWEFQIFIHPT-GKYAY 325 (496)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEE--ECSSSSCCEEEEECTT-SSEEE
T ss_pred ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeE--ecCCCCCceEEEEcCC-CCEEE
Confidence 35778899554 66666677889999987 3331000 00 000011 1122345678999999 885 4
Q ss_pred EEEeCCCcEEEEEc
Q psy14817 120 ASCSDDGDVKLWQI 133 (138)
Q Consensus 120 ~~~~~d~~v~~wd~ 133 (138)
++-.....|+.++.
T Consensus 326 vaD~~~h~I~kid~ 339 (496)
T 3kya_A 326 FGVINNHYFMRSDY 339 (496)
T ss_dssp EEETTTTEEEEEEE
T ss_pred EEeCCCCEEEEEec
Confidence 45456677888654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 138 | ||||
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 2e-09 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 5e-09 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 3e-04 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 2e-08 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 2e-05 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 2e-04 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 1e-07 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 3e-05 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 8e-05 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 0.002 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 2e-06 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 6e-06 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 1e-05 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 4e-05 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 1e-04 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 5e-04 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 8e-04 | |
| d2gu2a1 | 307 | c.56.5.7 (A:4-310) Aspartoacylase AspA {Rat (Rattu | 0.002 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 0.002 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 0.002 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 0.002 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 0.003 |
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 52.5 bits (124), Expect = 2e-09
Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 19/136 (13%)
Query: 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 63
G + + S D +VK+W N + TP++ + H + ++
Sbjct: 265 DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI----GHKDFVLSVATTQND 320
Query: 64 DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP-----GM 118
+ I + D + + D S + + + H V VA +
Sbjct: 321 EYILSGSKDRGVLFW---------DKKSGNPLLM-LQGHRNSVISVAVANGSSLGPEYNV 370
Query: 119 LASCSDDGDVKLWQIK 134
A+ S D ++W+ K
Sbjct: 371 FATGSGDCKARIWKYK 386
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 50.9 bits (120), Expect = 5e-09
Identities = 27/132 (20%), Positives = 49/132 (37%), Gaps = 27/132 (20%)
Query: 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 60
+ G L + S D T+K+W + S C+ TL GH + + +
Sbjct: 213 SGKPGPFLLSGSRDKTIKMW---------------DVSTGMCLMTLVGHDN-WVRGVLFH 256
Query: 61 HLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA 120
I + D +R++ D + + T AH V + ++ P +
Sbjct: 257 SGGKFILSCADDKTLRVW---------DYKNKRCMKT-LNAHEHFVTSLDFHKTAP-YVV 305
Query: 121 SCSDDGDVKLWQ 132
+ S D VK+W+
Sbjct: 306 TGSVDQTVKVWE 317
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 37.0 bits (84), Expect = 3e-04
Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 15/136 (11%)
Query: 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND----SVWKCVCTLSGHHGRTIYDIS 58
Q G+ +A+CS+D TV++W A + + S S
Sbjct: 153 QDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKK 212
Query: 59 WCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGM 118
+ + D I+++ D+ + + T H+ V V ++
Sbjct: 213 SGKPGPFLLSGSRDKTIKMW---------DVSTGMCLMT-LVGHDNWVRGVLFHSGGK-F 261
Query: 119 LASCSDDGDVKLWQIK 134
+ SC+DD +++W K
Sbjct: 262 ILSCADDKTLRVWDYK 277
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 49.3 bits (116), Expect = 2e-08
Identities = 22/128 (17%), Positives = 42/128 (32%), Gaps = 25/128 (19%)
Query: 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 63
G+ AT SDDAT +++ + + + I +S+
Sbjct: 237 NGNAFATGSDDATCRLFDLRAD--------------QELMTYSHDNIICGITSVSFSKSG 282
Query: 64 DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 123
L+ D ++ D + D H+ V+C+ +A+ S
Sbjct: 283 RLLLAGYDDFNCNVW---------DALKADRAGV-LAGHDNRVSCLGVTDD-GMAVATGS 331
Query: 124 DDGDVKLW 131
D +K+W
Sbjct: 332 WDSFLKIW 339
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 40.9 bits (94), Expect = 2e-05
Identities = 22/134 (16%), Positives = 42/134 (31%), Gaps = 25/134 (18%)
Query: 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 60
+ + + DA+ K+W + C T +GH I I +
Sbjct: 192 LAPDTRLFVSGACDASAKLW---------------DVREGMCRQTFTGHES-DINAICFF 235
Query: 61 HLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA 120
+ AT D R+F +L+ H + V+++ +L
Sbjct: 236 PNGNAFATGSDDATCRLFD--------LRADQELMTYSHDNIICGITSVSFSKSGR-LLL 286
Query: 121 SCSDDGDVKLWQIK 134
+ DD + +W
Sbjct: 287 AGYDDFNCNVWDAL 300
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 37.8 bits (86), Expect = 2e-04
Identities = 14/76 (18%), Positives = 24/76 (31%), Gaps = 16/76 (21%)
Query: 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL 62
++G L DD +W K L+GH R + +
Sbjct: 280 KSGRLLLAGYDDFNCNVWDALK---------------ADRAGVLAGHDNR-VSCLGVTDD 323
Query: 63 TDLIATACGDDAIRIF 78
+AT D ++I+
Sbjct: 324 GMAVATGSWDSFLKIW 339
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 46.8 bits (109), Expect = 1e-07
Identities = 21/135 (15%), Positives = 39/135 (28%), Gaps = 9/135 (6%)
Query: 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 63
S +CS D +K+W P + S V HH + I
Sbjct: 23 CNSFTVSCSGDGYLKVWD----NKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFE 78
Query: 64 D-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP----VVPGM 118
L+AT + ++ E ++ L + + W ++
Sbjct: 79 LCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHR 138
Query: 119 LASCSDDGDVKLWQI 133
L + G +W+
Sbjct: 139 LVATDVKGTTYIWKF 153
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 40.2 bits (92), Expect = 3e-05
Identities = 16/95 (16%), Positives = 33/95 (34%), Gaps = 5/95 (5%)
Query: 42 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIF--KENPEAGDSDMVSFDLVHTEH 99
H I+ +S C+ + GD ++++ K D VH
Sbjct: 6 TANAGKAHDA-DIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSG 62
Query: 100 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134
H + + + ++A+ S GD+ ++I
Sbjct: 63 LHHVDVLQAIERDAFELCLVATTSFSGDLLFYRIT 97
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.7 bits (88), Expect = 8e-05
Identities = 16/136 (11%), Positives = 43/136 (31%), Gaps = 11/136 (8%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
+AT S + ++ + + + + L+
Sbjct: 79 LCLVATTSFSGDLLFYR-ITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSH 137
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHT--------EHRAHNQDVNCVAWNPVVP 116
+ I+K +P A +S+ ++ + T +Q V +
Sbjct: 138 RLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE--R 195
Query: 117 GMLASCSDDGDVKLWQ 132
G++A+ ++G V++ +
Sbjct: 196 GLIATGFNNGTVQISE 211
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 34.8 bits (78), Expect = 0.002
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 100 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137
+AH+ D+ V+ SCS DG +K+W KL +
Sbjct: 11 KAHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLD 45
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 43.3 bits (100), Expect = 2e-06
Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 11/92 (11%)
Query: 40 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH 99
+H + I+ +++D I + ++ I+ ++ S LVH
Sbjct: 270 ANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIY---------NLRSGKLVHANI 320
Query: 100 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 131
+ V + ++A+ DG L
Sbjct: 321 LKDADQIWSVNFKG--KTLVAAVEKDGQSFLE 350
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.1 bits (97), Expect = 6e-06
Identities = 17/127 (13%), Positives = 35/127 (27%), Gaps = 22/127 (17%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
+ + S D T+++W +C L G
Sbjct: 188 DRLVVSGSSDNTIRLWD------------------IECGACLRVLEGHEELVRCIRFDNK 229
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
I + D I+++ + T H+ V + ++ + S S
Sbjct: 230 RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRT-LVEHSGRVFRLQFDE---FQIVSSSH 285
Query: 125 DGDVKLW 131
D + +W
Sbjct: 286 DDTILIW 292
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.9 bits (94), Expect = 1e-05
Identities = 7/95 (7%), Positives = 24/95 (25%), Gaps = 12/95 (12%)
Query: 39 VWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTE 98
V K H + + + + + D+ + + +
Sbjct: 253 VNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAW---------RTPYGASIFQS 303
Query: 99 HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133
+ V + + + S D ++++
Sbjct: 304 K--ESSSVLSCDISVD-DKYIVTGSGDKKATVYEV 335
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 39.8 bits (91), Expect = 4e-05
Identities = 16/79 (20%), Positives = 27/79 (34%), Gaps = 9/79 (11%)
Query: 54 IYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 113
I +W IA + + I+ + + VH + HN V V W P
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIY-------EKSGNKWVQVHE-LKEHNGQVTGVDWAP 61
Query: 114 VVPGMLASCSDDGDVKLWQ 132
+ +C D + +W
Sbjct: 62 -DSNRIVTCGTDRNAYVWT 79
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 38.3 bits (87), Expect = 1e-04
Identities = 14/114 (12%), Positives = 34/114 (29%), Gaps = 14/114 (12%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
+++A C ++ V I+++ + + W V L H+G + + W ++
Sbjct: 19 RTQIAICPNNHEVHIYEK-------------SGNKWVQVHELKEHNG-QVTGVDWAPDSN 64
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGM 118
I T D ++ +V + +
Sbjct: 65 RIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRV 118
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 36.4 bits (82), Expect = 5e-04
Identities = 15/111 (13%), Positives = 34/111 (30%), Gaps = 14/111 (12%)
Query: 4 TGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL 62
T + +A A V+ D DS V +GH + + + +
Sbjct: 28 TTNAIAYPCGKSAFVRCLD-------------DGDSKVPPVVQFTGHGSSVVTTVKFSPI 74
Query: 63 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 113
GD++ ++ V +E + ++ ++W+
Sbjct: 75 KGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDF 125
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 35.7 bits (80), Expect = 8e-04
Identities = 18/94 (19%), Positives = 25/94 (26%), Gaps = 11/94 (11%)
Query: 40 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH 99
DL+AT D I I+ + +
Sbjct: 204 RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIY---------SVKRPMKIIKAL 254
Query: 100 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133
AH VN + W P L S D +K W +
Sbjct: 255 NAHKDGVNNLLWET--PSTLVSSGADACIKRWNV 286
|
| >d2gu2a1 c.56.5.7 (A:4-310) Aspartoacylase AspA {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphorylase/hydrolase-like superfamily: Zn-dependent exopeptidases family: AstE/AspA-like domain: Aspartoacylase AspA species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 34.9 bits (80), Expect = 0.002
Identities = 21/136 (15%), Positives = 36/136 (26%), Gaps = 16/136 (11%)
Query: 8 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHGRTIYDISWCHLTDLI 66
+ TC ++ P S+ K + G + +
Sbjct: 139 IKTCMAPLPCSVYLIEHPSLKYA----TTRSIAKYPVGIEVGPQPHGVLRADILDQMRRM 194
Query: 67 ATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVA----------WNPVVP 116
D I+ F E E + + ++ N+ + A W P+ P
Sbjct: 195 LKHALD-FIQRFNEGKEFPPCAIDVYKIMEKVDYPRNESGDVAAVIHPNLQDQDWKPLHP 253
Query: 117 GMLASCSDDGDVKLWQ 132
G S DG V
Sbjct: 254 GDPVFVSLDGKVIPLG 269
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 34.8 bits (78), Expect = 0.002
Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 28/130 (21%)
Query: 5 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 64
G + + S D ++++W + C+ TL+GH T +
Sbjct: 187 GIHVVSGSLDTSIRVW---------------DVETGNCIHTLTGHQSLTS---GMELKDN 228
Query: 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 124
++ + D ++I+ + + N+ + V + + SD
Sbjct: 229 ILVSGNADSTVKIWD----------IKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSD 278
Query: 125 DGDVKLWQIK 134
DG VKLW +K
Sbjct: 279 DGTVKLWDLK 288
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 34.5 bits (77), Expect = 0.002
Identities = 12/78 (15%), Positives = 23/78 (29%), Gaps = 15/78 (19%)
Query: 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 60
G+++A+ S D T+KIW N + K T+ +
Sbjct: 246 WSPDGTKIASASADKTIKIW---------------NVATLKVEKTIPVGTRIEDQQLGII 290
Query: 61 HLTDLIATACGDDAIRIF 78
+ + + I
Sbjct: 291 WTKQALVSISANGFINFV 308
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 34.5 bits (77), Expect = 0.002
Identities = 14/101 (13%), Positives = 33/101 (32%), Gaps = 10/101 (9%)
Query: 31 IPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMV 90
V++ + H +++ ++W IA+A D I+I+ ++
Sbjct: 218 GVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIW---------NVA 268
Query: 91 SFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 131
+ + T + + L S S +G +
Sbjct: 269 TLKVEKTIPVGTRIEDQQLGIIWT-KQALVSISANGFINFV 308
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 34.1 bits (76), Expect = 0.003
Identities = 8/83 (9%), Positives = 25/83 (30%), Gaps = 7/83 (8%)
Query: 50 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV 109
I DI L+ D ++ ++ D+ + ++ + + + C
Sbjct: 10 PKDYISDIKIIPSKSLLLITSWDGSLTVY-------KFDIQAKNVDLLQSLRYKHPLLCC 62
Query: 110 AWNPVVPGMLASCSDDGDVKLWQ 132
+ + + G++
Sbjct: 63 NFIDNTDLQIYVGTVQGEILKVD 85
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 138 | |||
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.93 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.92 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.91 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.91 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.9 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.9 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.9 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.89 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 99.89 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 99.89 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.88 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.87 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.86 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.85 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.85 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.84 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.83 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.83 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.82 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.81 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.79 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.78 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.78 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.78 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.75 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.75 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.74 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.72 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.7 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.69 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.64 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.62 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.52 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.5 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.39 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.39 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.38 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.32 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.3 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.21 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.19 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.15 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.06 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.0 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 98.99 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.91 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 98.87 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 98.84 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.68 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.57 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.53 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.24 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 98.12 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 98.08 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.0 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 97.98 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 97.74 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 97.74 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 97.69 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 97.61 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 97.61 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 97.54 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 97.52 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 97.32 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 96.94 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 96.84 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 96.82 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 96.58 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 96.4 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 96.27 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 96.1 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 93.54 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 89.52 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 87.64 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 86.35 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 86.26 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 83.95 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 83.72 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 82.76 | |
| d1c8ua2 | 171 | Thioesterase II (TesB) {Escherichia coli [TaxId: 5 | 82.47 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 81.01 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 80.67 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 80.14 |
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.93 E-value=8.3e-26 Score=143.86 Aligned_cols=125 Identities=17% Similarity=0.237 Sum_probs=89.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCc---EEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDA---IRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~---i~i 77 (138)
|+|++ +||+|+.|++|+|||+..... ....+....+.+ |...|.+++|+|++.+|++|+.|++ |++
T Consensus 192 ~s~dg-~lasgs~Dg~i~iwd~~~~~~---------~~~~~~~~~l~~-h~~~V~~l~~spdg~~l~sgs~D~t~~~i~l 260 (393)
T d1sq9a_ 192 ISERG-LIATGFNNGTVQISELSTLRP---------LYNFESQHSMIN-NSNSIRSVKFSPQGSLLAIAHDSNSFGCITL 260 (393)
T ss_dssp ECTTS-EEEEECTTSEEEEEETTTTEE---------EEEEECCC---C-CCCCEEEEEECSSTTEEEEEEEETTEEEEEE
T ss_pred ECCCC-EEEEEeCCCcEEEEeeccccc---------cccccccccccc-ccceEEEcccccccceeeeecCCCCcceeee
Confidence 46766 899999999999999754321 011122234455 7899999999999999999999874 899
Q ss_pred EeccCCCCCCce---eeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 78 FKENPEAGDSDM---VSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 78 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
||+..+...... ...........+|...|++++|+|+ +++|++++.|++|++||+++++
T Consensus 261 wd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd-~~~l~S~s~D~~v~vWd~~~g~ 322 (393)
T d1sq9a_ 261 YETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDS-GETLCSAGWDGKLRFWDVKTKE 322 (393)
T ss_dssp EETTTCCEEEEECBC--------CCBSBSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTTE
T ss_pred cccccceeeeeeccccccccceeeeecccCceeeeccCCC-CCeeEEECCCCEEEEEECCCCC
Confidence 999876511000 0000112223479999999999999 9999999999999999998764
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.92 E-value=1e-23 Score=130.74 Aligned_cols=117 Identities=22% Similarity=0.343 Sum_probs=95.1
Q ss_pred CccCCCe-EEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSR-LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~-l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|++++ |++|+.|+.|++||++. .++...+.. |...|.++.|+|++.++++++.|+.+++|+
T Consensus 154 ~~~~~~~~l~sgs~d~~i~i~d~~~---------------~~~~~~~~~-~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d 217 (311)
T d1nr0a1 154 FKPSRPFRIISGSDDNTVAIFEGPP---------------FKFKSTFGE-HTKFVHSVRYNPDGSLFASTGGDGTIVLYN 217 (311)
T ss_dssp ECSSSSCEEEEEETTSCEEEEETTT---------------BEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ccccceeeecccccccccccccccc---------------ccccccccc-ccccccccccCccccccccccccccccccc
Confidence 5788875 88999999999999643 355677777 899999999999999999999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..... ....+........+|...|++++|+|+ +++|++++.|+.|++||+++++
T Consensus 218 ~~~~~---~~~~~~~~~~~~~~h~~~V~~~~~s~~-~~~l~tgs~Dg~v~iwd~~t~~ 271 (311)
T d1nr0a1 218 GVDGT---KTGVFEDDSLKNVAHSGSVFGLTWSPD-GTKIASASADKTIKIWNVATLK 271 (311)
T ss_dssp TTTCC---EEEECBCTTSSSCSSSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTTE
T ss_pred ccccc---ccccccccccccccccccccccccCCC-CCEEEEEeCCCeEEEEECCCCc
Confidence 98755 111111112223468889999999999 9999999999999999998765
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.91 E-value=1.2e-23 Score=130.25 Aligned_cols=105 Identities=20% Similarity=0.245 Sum_probs=90.0
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEe--cCCCccCeEEEEEecCCCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL--SGHHGRTIYDISWCHLTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~ 78 (138)
|+|++++|++|+.|+.|++|++... ..+..+ .. +...+.++.|+|++.++++|+.|+.|++|
T Consensus 234 ~~p~~~~l~s~s~d~~i~~~~~~~~---------------~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~g~~dg~i~iw 297 (340)
T d1tbga_ 234 FFPNGNAFATGSDDATCRLFDLRAD---------------QELMTYSHDN-IICGITSVSFSKSGRLLLAGYDDFNCNVW 297 (340)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTT---------------EEEEEECCTT-CCSCEEEEEECSSSCEEEEEETTSCEEEE
T ss_pred ECCCCCEEEEEeCCCeEEEEeeccc---------------cccccccccc-ccCceEEEEECCCCCEEEEEECCCEEEEE
Confidence 5799999999999999999997543 223332 33 56789999999999999999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEE
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd 132 (138)
|+..+. ....+.+|...|++++|+|+ +.+|++|+.||.|++||
T Consensus 298 d~~~~~----------~~~~~~~H~~~V~~l~~s~d-~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 298 DALKAD----------RAGVLAGHDNRVSCLGVTDD-GMAVATGSWDSFLKIWN 340 (340)
T ss_dssp ETTTCC----------EEEEECCCSSCEEEEEECTT-SSCEEEEETTSCEEEEC
T ss_pred ECCCCc----------EEEEEcCCCCCEEEEEEeCC-CCEEEEEccCCEEEEeC
Confidence 998776 44555689999999999999 99999999999999997
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.91 E-value=2e-23 Score=131.90 Aligned_cols=113 Identities=18% Similarity=0.325 Sum_probs=95.0
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|||+|++||+|+.|+.|+||+... ....++..+.+ |...|.+++|+|++.+|++++.|++|++|++
T Consensus 15 ~s~dg~~la~~~~~~~i~iw~~~~-------------~~~~~~~~l~g-H~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~ 80 (371)
T d1k8kc_ 15 WNKDRTQIAICPNNHEVHIYEKSG-------------NKWVQVHELKE-HNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL 80 (371)
T ss_dssp ECTTSSEEEEECSSSEEEEEEEET-------------TEEEEEEEEEC-CSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred ECCCCCEEEEEeCCCEEEEEECCC-------------CCEEEEEEecC-CCCCEEEEEECCCCCEEEEEECCCeEEEEee
Confidence 689999999999999999999743 23356778888 8999999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.... . ........|...|++++|+|+ ++.|++++.|+.+++|++...
T Consensus 81 ~~~~-------~-~~~~~~~~~~~~v~~i~~~p~-~~~l~~~s~d~~i~i~~~~~~ 127 (371)
T d1k8kc_ 81 KGRT-------W-KPTLVILRINRAARCVRWAPN-EKKFAVGSGSRVISICYFEQE 127 (371)
T ss_dssp ETTE-------E-EEEEECCCCSSCEEEEEECTT-SSEEEEEETTSSEEEEEEETT
T ss_pred cccc-------c-ccccccccccccccccccccc-cccceeecccCcceeeeeecc
Confidence 8643 0 011223467889999999999 999999999999999987654
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.90 E-value=4.7e-23 Score=130.10 Aligned_cols=119 Identities=20% Similarity=0.335 Sum_probs=90.6
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|+.|++||++.......... .....+...... |...|.+++|+|++.++++|+.|+.|++||+
T Consensus 262 ~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~ 337 (388)
T d1erja_ 262 FTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKT---PNSGTCEVTYIG-HKDFVLSVATTQNDEYILSGSKDRGVLFWDK 337 (388)
T ss_dssp ECTTSSEEEEEETTSEEEEEEC------------------CEEEEEEC-CSSCEEEEEECGGGCEEEEEETTSEEEEEET
T ss_pred ECCCCCEEEEEECCCcEEEEeccCCcccccccc---ccccceeeeccc-ccceEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 578999999999999999999876543322111 112234445555 7899999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEE------ccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW------NPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~------~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
..+. ....+.+|...|+++++ +|+ +.+|++|+.|++|++|+++
T Consensus 338 ~~~~----------~~~~l~~H~~~V~~~~~~~~~~~spd-~~~l~s~s~Dg~I~iW~~~ 386 (388)
T d1erja_ 338 KSGN----------PLLMLQGHRNSVISVAVANGSSLGPE-YNVFATGSGDCKARIWKYK 386 (388)
T ss_dssp TTCC----------EEEEEECCSSCEEEEEECSSCTTCTT-CEEEEEEETTSEEEEEEEE
T ss_pred CCCc----------EEEEEeCCCCCEEEEEEecCcccCCC-CCEEEEEeCCCEEEEEeee
Confidence 9876 44555689999999875 567 8899999999999999986
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.90 E-value=1.8e-22 Score=125.09 Aligned_cols=112 Identities=19% Similarity=0.236 Sum_probs=91.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC--CCcEEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG--DDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--d~~i~i~ 78 (138)
|+|+|++||+|+.|+.|++||+..... .....+.. |...|.+++|+|++.++++++. +..+++|
T Consensus 66 ~sp~g~~latg~~dg~i~iwd~~~~~~-------------~~~~~~~~-~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~ 131 (311)
T d1nr0a1 66 TSPSGYYCASGDVHGNVRIWDTTQTTH-------------ILKTTIPV-FSGPVKDISWDSESKRIAAVGEGRERFGHVF 131 (311)
T ss_dssp ECTTSSEEEEEETTSEEEEEESSSTTC-------------CEEEEEEC-SSSCEEEEEECTTSCEEEEEECCSSCSEEEE
T ss_pred EeCCCCeEeccccCceEeeeeeecccc-------------cccccccc-ccCcccccccccccccccccccccccccccc
Confidence 689999999999999999999865433 22344566 7889999999999999888875 4569999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCC-EEEEEeCCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~d~~v~~wd~~~~~ 137 (138)
++.... ....+..|...|++++|+|+ ++ .+++++.|+.|++||+++.+
T Consensus 132 ~~~~~~----------~~~~l~~h~~~v~~v~~~~~-~~~~l~sgs~d~~i~i~d~~~~~ 180 (311)
T d1nr0a1 132 LFDTGT----------SNGNLTGQARAMNSVDFKPS-RPFRIISGSDDNTVAIFEGPPFK 180 (311)
T ss_dssp ETTTCC----------BCBCCCCCSSCEEEEEECSS-SSCEEEEEETTSCEEEEETTTBE
T ss_pred cccccc----------cccccccccccccccccccc-ceeeecccccccccccccccccc
Confidence 998765 33445678899999999998 55 58899999999999998754
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.90 E-value=3.9e-22 Score=125.93 Aligned_cols=115 Identities=19% Similarity=0.329 Sum_probs=95.3
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|+.|++||+.. ..+++...+.. |...|.+++|+|+++.+++++.|+.+++|++
T Consensus 59 fsp~~~~l~s~s~D~~i~vWd~~~-------------~~~~~~~~~~~-~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~ 124 (371)
T d1k8kc_ 59 WAPDSNRIVTCGTDRNAYVWTLKG-------------RTWKPTLVILR-INRAARCVRWAPNEKKFAVGSGSRVISICYF 124 (371)
T ss_dssp EETTTTEEEEEETTSCEEEEEEET-------------TEEEEEEECCC-CSSCEEEEEECTTSSEEEEEETTSSEEEEEE
T ss_pred ECCCCCEEEEEECCCeEEEEeecc-------------ccccccccccc-ccccccccccccccccceeecccCcceeeee
Confidence 689999999999999999999853 23355666666 7889999999999999999999999999998
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.... ... ........|...|.+++|+|+ +.+|++++.|+.+++|++...
T Consensus 125 ~~~~---~~~---~~~~~~~~~~~~v~~v~~~p~-~~~l~s~s~D~~v~v~~~~~~ 173 (371)
T d1k8kc_ 125 EQEN---DWW---VCKHIKKPIRSTVLSLDWHPN-SVLLAAGSCDFKCRIFSAYIK 173 (371)
T ss_dssp ETTT---TEE---EEEEECTTCCSCEEEEEECTT-SSEEEEEETTSCEEEEECCCT
T ss_pred eccc---ccc---ccccccccccccccccccccc-ccceeccccCcEEEEEeeccC
Confidence 8654 111 122334578889999999999 999999999999999998654
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.89 E-value=2e-22 Score=123.32 Aligned_cols=103 Identities=22% Similarity=0.408 Sum_probs=90.1
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccC
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 82 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~ 82 (138)
..+.++++++.|+.|++|++... +++..+.+ |...|.+++|+|++.+|++++.|+.|++||+..
T Consensus 215 ~~~~~~~~~~~d~~i~~~~~~~~---------------~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 278 (317)
T d1vyhc1 215 KPGPFLLSGSRDKTIKMWDVSTG---------------MCLMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 278 (317)
T ss_dssp --CCEEEEEETTSEEEEEETTTT---------------EEEEEEEC-CSSCEEEEEECSSSSCEEEEETTTEEEEECCTT
T ss_pred cCCceeEeccCCCEEEEEECCCC---------------cEEEEEeC-CCCCEEEEEECCCCCEEEEEECCCeEEEEECCC
Confidence 35678999999999999996433 56788888 899999999999999999999999999999987
Q ss_pred CCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEE
Q psy14817 83 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd 132 (138)
++ ....+.+|...|++++|+|+ +++|++++.|++|++||
T Consensus 279 ~~----------~~~~~~~h~~~V~~~~~s~~-~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 279 KR----------CMKTLNAHEHFVTSLDFHKT-APYVVTGSVDQTVKVWE 317 (317)
T ss_dssp SC----------CCEEEECCSSCEEEEEECSS-SSCEEEEETTSEEEEEC
T ss_pred Cc----------EEEEEcCCCCCEEEEEEcCC-CCEEEEEeCCCeEEEeC
Confidence 76 44455689999999999999 99999999999999997
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=5.6e-22 Score=123.69 Aligned_cols=104 Identities=13% Similarity=0.189 Sum_probs=89.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|+.+++||+.... ...... |...|.+++|+|++.+|++++.|+.|++||+
T Consensus 232 ~~~~~~~l~~~~~d~~i~i~d~~~~~----------------~~~~~~-~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~ 294 (337)
T d1gxra_ 232 YCPTGEWLAVGMESSNVEVLHVNKPD----------------KYQLHL-HESCVLSLKFAYCGKWFVSTGKDNLLNAWRT 294 (337)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTSSC----------------EEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred Ecccccccceeccccccccccccccc----------------cccccc-cccccceEEECCCCCEEEEEeCCCeEEEEEC
Confidence 57899999999999999999975432 123445 7889999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
..+. .... ..|...|++++|+|+ +++|++++.|+.|++||+
T Consensus 295 ~~~~----------~~~~-~~~~~~v~~~~~s~d-~~~l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 295 PYGA----------SIFQ-SKESSSVLSCDISVD-DKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp TTCC----------EEEE-EECSSCEEEEEECTT-SCEEEEEETTSCEEEEEE
T ss_pred CCCC----------EEEE-ccCCCCEEEEEEeCC-CCEEEEEeCCCeEEEEEE
Confidence 8776 2222 357889999999999 999999999999999997
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=8.2e-22 Score=122.96 Aligned_cols=116 Identities=15% Similarity=0.248 Sum_probs=92.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|||+|++||||+ ||.|+|||+........ ........ |...|.+++|+|++.+|++++.|+.|++||+
T Consensus 59 fs~~g~~latg~-dg~V~iWd~~~~~~~~~----------~~~~~~~~-h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~ 126 (337)
T d1gxra_ 59 ISNPTRHVYTGG-KGCVKVWDISHPGNKSP----------VSQLDCLN-RDNYIRSCKLLPDGCTLIVGGEASTLSIWDL 126 (337)
T ss_dssp ECSSSSEEEEEC-BSEEEEEETTSTTCCSC----------SEEEECSC-TTSBEEEEEECTTSSEEEEEESSSEEEEEEC
T ss_pred ECCCCCEEEEEE-CCEEEEEEccCCcccce----------eEEeeecC-CCCcEEEEEEcCCCCEEEEeecccccccccc
Confidence 689999999998 79999999866543211 12233445 7889999999999999999999999999998
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.... . ........|...+..+.|+|+ +.++++++.|+.+++|++++++
T Consensus 127 ~~~~---~-----~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~i~~~~~~~~~ 174 (337)
T d1gxra_ 127 AAPT---P-----RIKAELTSSAPACYALAISPD-SKVCFSCCSDGNIAVWDLHNQT 174 (337)
T ss_dssp CCC----------EEEEEEECSSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTE
T ss_pred cccc---c-----ccccccccccccccccccccc-cccccccccccccccccccccc
Confidence 7543 0 122333467889999999999 9999999999999999998754
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.88 E-value=2.5e-21 Score=118.04 Aligned_cols=107 Identities=21% Similarity=0.285 Sum_probs=86.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCC----------CeEEEee
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT----------DLIATAC 70 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~----------~~~~s~~ 70 (138)
|+|++.+|++|+.||.|++||+.... .....+.. |...|.+++|+|.+ .++++|+
T Consensus 170 ~s~~~~~l~~g~~dg~i~i~d~~~~~--------------~~~~~~~~-h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs 234 (287)
T d1pgua2 170 ISPSETYIAAGDVMGKILLYDLQSRE--------------VKTSRWAF-RTSKINAISWKPAEKGANEEEIEEDLVATGS 234 (287)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTE--------------EEECCSCC-CSSCEEEEEECCCC------CCSCCEEEEEE
T ss_pred eccCccccccccccccccceeecccc--------------cccccccc-cccccceeeecccccccccccCCCCeeEeec
Confidence 68999999999999999999974331 11223445 88899999998753 5899999
Q ss_pred CCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEc
Q psy14817 71 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 133 (138)
Q Consensus 71 ~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~ 133 (138)
.|++|++|+++... .......+|...|+++.|+|+ + .|++++.|+.|++|++
T Consensus 235 ~D~~i~iw~~~~~~---------~~~~~~~~h~~~V~~v~~~~~-~-~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 235 LDTNIFIYSVKRPM---------KIIKALNAHKDGVNNLLWETP-S-TLVSSGADACIKRWNV 286 (287)
T ss_dssp TTSCEEEEESSCTT---------CCEEETTSSTTCEEEEEEEET-T-EEEEEETTSCEEEEEE
T ss_pred CCCeEEEEECCCCC---------eEEEEeCCCCCCeEEEEECCC-C-EEEEEECCCeEEEEEE
Confidence 99999999987643 134445689999999999997 5 5889999999999986
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.87 E-value=5.5e-21 Score=117.06 Aligned_cols=114 Identities=17% Similarity=0.239 Sum_probs=91.2
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++|+.|+.|++||+..... ..+. ... |...|.+++|+|++.++++++.|+.|++|++
T Consensus 144 ~s~~~~~l~~g~~dg~i~~~d~~~~~~-------------~~~~-~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~ 208 (299)
T d1nr0a2 144 LSNDKQFVAVGGQDSKVHVYKLSGASV-------------SEVK-TIV-HPAEITSVAFSNNGAFLVATDQSRKVIPYSV 208 (299)
T ss_dssp ECTTSCEEEEEETTSEEEEEEEETTEE-------------EEEE-EEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEEG
T ss_pred ccccccccccccccccccccccccccc-------------cccc-ccc-ccccccccccccccccccccccccccccccc
Confidence 578999999999999999999854311 1122 223 7889999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..... . ........|...|++++|+|+ +.+|++++.|+.|++||++++.
T Consensus 209 ~~~~~------~-~~~~~~~~h~~~v~~l~~s~~-~~~l~sgs~dg~i~iwd~~~~~ 257 (299)
T d1nr0a2 209 ANNFE------L-AHTNSWTFHTAKVACVSWSPD-NVRLATGSLDNSVIVWNMNKPS 257 (299)
T ss_dssp GGTTE------E-SCCCCCCCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTCTT
T ss_pred ccccc------c-ccccccccccccccccccccc-ccceEEEcCCCEEEEEECCCCC
Confidence 86540 0 011223468899999999999 9999999999999999998653
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.86 E-value=3.5e-20 Score=114.57 Aligned_cols=111 Identities=20% Similarity=0.336 Sum_probs=92.8
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
.+.+.++++|+.|+.|++||++.. +++..+.+ |...|.+++|+|++.++++++.|+.|++|++.
T Consensus 193 ~~~~~~~~~~~~d~~v~i~d~~~~---------------~~~~~~~~-h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~ 256 (340)
T d1tbga_ 193 APDTRLFVSGACDASAKLWDVREG---------------MCRQTFTG-HESDINAICFFPNGNAFATGSDDATCRLFDLR 256 (340)
T ss_dssp CTTSSEEEEEETTTEEEEEETTTT---------------EEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred ccccceeEEeecCceEEEEECCCC---------------cEEEEEeC-CCCCeEEEEECCCCCEEEEEeCCCeEEEEeec
Confidence 467889999999999999997543 56778888 89999999999999999999999999999998
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
... .........+...|..++|+|+ +.+|++++.|+.|++||+++++
T Consensus 257 ~~~--------~~~~~~~~~~~~~i~~~~~s~~-~~~l~~g~~dg~i~iwd~~~~~ 303 (340)
T d1tbga_ 257 ADQ--------ELMTYSHDNIICGITSVSFSKS-GRLLLAGYDDFNCNVWDALKAD 303 (340)
T ss_dssp TTE--------EEEEECCTTCCSCEEEEEECSS-SCEEEEEETTSCEEEEETTTCC
T ss_pred ccc--------cccccccccccCceEEEEECCC-CCEEEEEECCCEEEEEECCCCc
Confidence 654 0011122356678999999999 9999999999999999998764
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.85 E-value=9.5e-21 Score=115.99 Aligned_cols=112 Identities=16% Similarity=0.250 Sum_probs=84.4
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++|++++.|+.|++||+...... .....+.. |...|.+++|+|++.++++|+.|+.|++||+
T Consensus 187 ~~~~~~~l~~~~~d~~i~~~~~~~~~~~------------~~~~~~~~-h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~ 253 (299)
T d1nr0a2 187 FSNNGAFLVATDQSRKVIPYSVANNFEL------------AHTNSWTF-HTAKVACVSWSPDNVRLATGSLDNSVIVWNM 253 (299)
T ss_dssp ECTTSSEEEEEETTSCEEEEEGGGTTEE------------SCCCCCCC-CSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred cccccccccccccccccccccccccccc------------cccccccc-cccccccccccccccceEEEcCCCEEEEEEC
Confidence 5789999999999999999998654321 11234555 7889999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
...... . .......+...+..+.| ++ +.+|++++.|+.|++||+.
T Consensus 254 ~~~~~~---~----~~~~~~~~~~~v~~~~~-~~-~~~l~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 254 NKPSDH---P----IIIKGAHAMSSVNSVIW-LN-ETTIVSAGQDSNIKFWNVP 298 (299)
T ss_dssp TCTTSC---C----EEETTSSTTSCEEEEEE-EE-TTEEEEEETTSCEEEEECC
T ss_pred CCCCcc---e----EEEecCCCCCcEEEEEE-CC-CCEEEEEeCCCEEEEEecc
Confidence 865410 0 11111123456776665 44 6789999999999999974
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.85 E-value=2.5e-20 Score=117.48 Aligned_cols=123 Identities=20% Similarity=0.288 Sum_probs=90.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCC---CCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEE
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPD---NDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i 77 (138)
|||+|++||+|+ |+.|+|||+............. ............. |...|.+++|+|++.+|++|+.|+.|++
T Consensus 70 fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~V~~l~~s~~~~~l~s~~~dg~v~i 147 (388)
T d1erja_ 70 FSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPS-SDLYIRSVCFSPDGKFLATGAEDRLIRI 147 (388)
T ss_dssp ECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------C-CCCBEEEEEECTTSSEEEEEETTSCEEE
T ss_pred ECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccC-CCCCEEEEEECCCCCcceeccccccccc
Confidence 689999999997 8999999986543211110000 0000011122233 6778999999999999999999999999
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
|+..... ......+|...|.++.++++ +..+++++.++.+++||+++.
T Consensus 148 ~~~~~~~----------~~~~~~~h~~~v~~~~~~~~-~~~~~~~~~~~~i~~~d~~~~ 195 (388)
T d1erja_ 148 WDIENRK----------IVMILQGHEQDIYSLDYFPS-GDKLVSGSGDRTVRIWDLRTG 195 (388)
T ss_dssp EETTTTE----------EEEEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTT
T ss_pred ccccccc----------cccccccccccccccccccc-cccccccccceeeeeeecccc
Confidence 9998765 44445678999999999998 999999999999999998764
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.84 E-value=1.3e-19 Score=110.56 Aligned_cols=110 Identities=25% Similarity=0.408 Sum_probs=96.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|++++||||+.|++|+|||+... +++..+.+ |...|.+++|++++.+++++..++.+.+|+.
T Consensus 25 ~sp~~~~l~s~s~Dg~i~iWd~~~~---------------~~~~~~~~-h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (317)
T d1vyhc1 25 FHPVFSVMVSASEDATIKVWDYETG---------------DFERTLKG-HTDSVQDISFDHSGKLLASCSADMTIKLWDF 88 (317)
T ss_dssp ECSSSSEEEEEESSSCEEEEETTTC---------------CCCEEECC-CSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCC---------------CEEEEEeC-CCCcEEEEeeecccccccccccccccccccc
Confidence 6899999999999999999997543 33667787 8999999999999999999999999999998
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.... .......|...+..+.++|+ +..+++++.|+.+++||+++++
T Consensus 89 ~~~~----------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~ 134 (317)
T d1vyhc1 89 QGFE----------CIRTMHGHDHNVSSVSIMPN-GDHIVSASRDKTIKMWEVQTGY 134 (317)
T ss_dssp TSSC----------EEECCCCCSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTCC
T ss_pred cccc----------cccccccccccceeeeccCC-CceEEeeccCcceeEeecccce
Confidence 8765 44445578889999999999 9999999999999999998764
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.83 E-value=1.3e-19 Score=112.20 Aligned_cols=109 Identities=16% Similarity=0.299 Sum_probs=84.9
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
++++++||||+.|++|+|||+.. .+++..+.+ |.+.|.+++|+++ .++++++.|++|++|+..
T Consensus 20 ~~~~~~l~tgs~Dg~i~vWd~~~---------------~~~~~~l~~-H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~~~ 82 (355)
T d1nexb2 20 QFEDNYVITGADDKMIRVYDSIN---------------KKFLLQLSG-HDGGVWALKYAHG-GILVSGSTDRTVRVWDIK 82 (355)
T ss_dssp EEETTEEEEEETTTEEEEEETTT---------------TEEEEEEEC-CSSCEEEEEEETT-TEEEEEETTCCEEEEETT
T ss_pred EECCCEEEEEeCCCeEEEEECCC---------------CcEEEEEEC-CCCCEEEEEEcCC-CEEEEEeccccccccccc
Confidence 56889999999999999999643 266888888 8999999999985 589999999999999998
Q ss_pred CCCCCCceeeeeeee-eeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVH-TEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
... ... .....+........+.++ ...+++++.|+.|++||++...
T Consensus 83 ~~~---------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~i~iw~~~~~~ 129 (355)
T d1nexb2 83 KGC---------CTHVFEGHNSTVRCLDIVEYKN-IKYIVTGSRDNTLHVWKLPKES 129 (355)
T ss_dssp TTE---------EEEEECCCSSCEEEEEEEEETT-EEEEEEEETTSEEEEEECCC--
T ss_pred ccc---------cccccccccccccccccccccc-cceeeeecCCCcEEEEEccCCc
Confidence 654 111 111123334455667777 8899999999999999987653
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.83 E-value=1.2e-19 Score=112.81 Aligned_cols=113 Identities=14% Similarity=0.190 Sum_probs=84.1
Q ss_pred CccCCCe-EEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCC-CeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSR-LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~-l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~-~~~~s~~~d~~i~i~ 78 (138)
|+|++++ +++++.|+.+++|+...... ......... |...|.+++|+|++ .++++++.|+.|++|
T Consensus 167 ~~~~~~~~~~~~~~d~~v~~~d~~~~~~------------~~~~~~~~~-~~~~v~~v~~~pd~~~~l~s~~~d~~i~iw 233 (325)
T d1pgua1 167 LKQSRPMRSMTVGDDGSVVFYQGPPFKF------------SASDRTHHK-QGSFVRDVEFSPDSGEFVITVGSDRKISCF 233 (325)
T ss_dssp ECSSSSCEEEEEETTTEEEEEETTTBEE------------EEEECSSSC-TTCCEEEEEECSTTCCEEEEEETTCCEEEE
T ss_pred ccccccceEEEeeccccccccccccccc------------ceecccccC-CCCccEEeeeccccceeccccccccceeee
Confidence 4677764 77899999999999633211 111222334 67789999999974 689999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEc---cCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN---PVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|++.+. ....+..|...+..+.|+ |+ +.+|++++.|+.|++||+++++
T Consensus 234 d~~~~~----------~~~~l~~~~~~v~~~~~s~~~~d-g~~l~s~s~D~~i~iwd~~~~~ 284 (325)
T d1pgua1 234 DGKSGE----------FLKYIEDDQEPVQGGIFALSWLD-SQKFATVGADATIRVWDVTTSK 284 (325)
T ss_dssp ETTTCC----------EEEECCBTTBCCCSCEEEEEESS-SSEEEEEETTSEEEEEETTTTE
T ss_pred eecccc----------ccccccccccccccceeeeeccC-CCEEEEEeCCCeEEEEECCCCC
Confidence 998776 344445666666555554 56 8899999999999999998764
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.82 E-value=1.6e-19 Score=111.08 Aligned_cols=113 Identities=13% Similarity=-0.008 Sum_probs=83.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~~ 79 (138)
|+|++++||+||.|++|+|||+..... . ..+....+ |...|.+++|+|++. ++++|+.|+.|++|+
T Consensus 19 fsp~~~~L~s~s~Dg~v~iwd~~~~~~-----------~-~~~~~~~~-h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~ 85 (342)
T d1yfqa_ 19 IIPSKSLLLITSWDGSLTVYKFDIQAK-----------N-VDLLQSLR-YKHPLLCCNFIDNTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp EEGGGTEEEEEETTSEEEEEEEETTTT-----------E-EEEEEEEE-CSSCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred EeCCCCEEEEEECCCeEEEEEccCCCc-----------c-eEEEEecC-CCCCEEEEEEeCCCCCEEEEcccccceeeee
Confidence 689999999999999999999865422 1 12233334 789999999998765 899999999999999
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
+.... ........+........+.++ ...+++++.|+.+++||++.+
T Consensus 86 ~~~~~---------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~wd~~~~ 132 (342)
T d1yfqa_ 86 LIGSP---------SFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNY 132 (342)
T ss_dssp SSSSS---------SEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHH
T ss_pred ccccc---------ccccccccccccccccccccc-cccccccccccccceeecccc
Confidence 98765 111111122333344455566 889999999999999998643
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.81 E-value=2.6e-18 Score=104.53 Aligned_cols=111 Identities=14% Similarity=0.199 Sum_probs=85.9
Q ss_pred ccCCCeEEEeeCCC-cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 2 IQTGSRLATCSDDA-TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 2 s~~~~~l~t~s~d~-~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
+++++.+++++.|+ .+++|++.. .+....+...|...+.+++|+|++.+|++++.|+.|++||+
T Consensus 127 ~~~~~~~~v~~~~~~~v~~~~~~~---------------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~ 191 (287)
T d1pgua2 127 SLSQNYVAVGLEEGNTIQVFKLSD---------------LEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDL 191 (287)
T ss_dssp EECSSEEEEEETTTSCEEEEETTE---------------EEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eccCcceeeeccccceeeeeeccc---------------cceeeeeeeccCCceeEEEeccCccccccccccccccceee
Confidence 46777777777664 789998632 23334444447788999999999999999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccC---------CCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV---------VPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.... ........|...|.+++|+|. +..++++|+.|++|++||++.+
T Consensus 192 ~~~~---------~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~ 247 (287)
T d1pgua2 192 QSRE---------VKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRP 247 (287)
T ss_dssp TTTE---------EEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCT
T ss_pred cccc---------cccccccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCC
Confidence 8654 223334578899999999874 2568999999999999998763
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=1.9e-18 Score=106.42 Aligned_cols=110 Identities=19% Similarity=0.295 Sum_probs=74.0
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecC--CCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG--HHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
+++++|++|+.|+.|++||+... +....+.. .|...+.++.+ ++.++++++.||.|++||+
T Consensus 225 ~~~~~l~s~s~d~~i~iwd~~~~---------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~s~Dg~i~iwd~ 287 (342)
T d2ovrb2 225 LKDNILVSGNADSTVKIWDIKTG---------------QCLQTLQGPNKHQSAVTCLQF--NKNFVITSSDDGTVKLWDL 287 (342)
T ss_dssp EETTEEEEEETTSCEEEEETTTC---------------CEEEEECSTTSCSSCEEEEEE--CSSEEEEEETTSEEEEEET
T ss_pred cCCCEEEEEcCCCEEEEEecccc---------------cccccccccceeeeceeeccc--CCCeeEEEcCCCEEEEEEC
Confidence 34556666666666666664322 12233332 14556666666 4569999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCc----EEEEEcCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGD----VKLWQIKL 135 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~----v~~wd~~~ 135 (138)
+.++ ...........+|...|++++|+|+ +.++++|+.||+ |++||+..
T Consensus 288 ~tg~-----~i~~~~~~~~~~~~~~v~~v~~s~~-~~~la~g~~dGt~~~~l~~~Df~~ 340 (342)
T d2ovrb2 288 KTGE-----FIRNLVTLESGGSGGVVWRIRASNT-KLVCAVGSRNGTEETKLLVLDFDV 340 (342)
T ss_dssp TTCC-----EEEEEEECTTGGGTCEEEEEEECSS-EEEEEEECSSSSSCCEEEEEECCC
T ss_pred CCCC-----EEEEEecccCCCCCCCEEEEEECCC-CCEEEEEeCCCCCeeEEEEEeCCC
Confidence 8765 1111111122357788999999999 999999999986 99999874
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.78 E-value=1.4e-17 Score=103.31 Aligned_cols=114 Identities=16% Similarity=0.168 Sum_probs=89.9
Q ss_pred CccCCCeEEEeeC--CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEE
Q psy14817 1 MIQTGSRLATCSD--DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s~--d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i 77 (138)
|+++++++++++. ++.+++|+.... +++..+.+ |...|.+++|+|+++ .+++++.|+.+++
T Consensus 123 ~s~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~~d~~v~~ 186 (325)
T d1pgua1 123 WDFEGRRLCVVGEGRDNFGVFISWDSG---------------NSLGEVSG-HSQRINACHLKQSRPMRSMTVGDDGSVVF 186 (325)
T ss_dssp ECTTSSEEEEEECCSSCSEEEEETTTC---------------CEEEECCS-CSSCEEEEEECSSSSCEEEEEETTTEEEE
T ss_pred ECCCCCccceeeccccceEEEEeeccc---------------ccceeeee-cccccccccccccccceEEEeeccccccc
Confidence 5789998887764 678999986432 45777887 899999999999987 5778999999999
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
|+..... ..........|...|++++|+|+.+.++++++.|+.|++||+++++
T Consensus 187 ~d~~~~~-------~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~ 239 (325)
T d1pgua1 187 YQGPPFK-------FSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE 239 (325)
T ss_dssp EETTTBE-------EEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC
T ss_pred ccccccc-------cceecccccCCCCccEEeeeccccceeccccccccceeeeeecccc
Confidence 9987543 1111222346778899999999867899999999999999998765
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=9.3e-18 Score=103.33 Aligned_cols=108 Identities=21% Similarity=0.452 Sum_probs=82.2
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
++++.++++|+.|+.|++||++.. +++..+.. |...+.++.++ +.++++++.|+.|++|++.
T Consensus 184 ~~~~~~l~s~~~dg~i~~~d~~~~---------------~~~~~~~~-~~~~v~~~~~~--~~~l~s~s~d~~i~iwd~~ 245 (342)
T d2ovrb2 184 QFDGIHVVSGSLDTSIRVWDVETG---------------NCIHTLTG-HQSLTSGMELK--DNILVSGNADSTVKIWDIK 245 (342)
T ss_dssp EECSSEEEEEETTSCEEEEETTTC---------------CEEEEECC-CCSCEEEEEEE--TTEEEEEETTSCEEEEETT
T ss_pred cCCCCEEEEEeCCCeEEEeecccc---------------eeeeEecc-cccceeEEecC--CCEEEEEcCCCEEEEEecc
Confidence 457889999999999999997543 44677777 78888888775 5699999999999999998
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
... . . ........|...+.++.+ + ++++++++.||.|++||+++++
T Consensus 246 ~~~---~--~--~~~~~~~~~~~~~~~~~~--~-~~~~~s~s~Dg~i~iwd~~tg~ 291 (342)
T d2ovrb2 246 TGQ---C--L--QTLQGPNKHQSAVTCLQF--N-KNFVITSSDDGTVKLWDLKTGE 291 (342)
T ss_dssp TCC---E--E--EEECSTTSCSSCEEEEEE--C-SSEEEEEETTSEEEEEETTTCC
T ss_pred ccc---c--c--ccccccceeeeceeeccc--C-CCeeEEEcCCCEEEEEECCCCC
Confidence 765 0 0 011112245566666666 4 6799999999999999998875
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.78 E-value=4.8e-18 Score=107.77 Aligned_cols=127 Identities=16% Similarity=0.220 Sum_probs=85.6
Q ss_pred CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEE---eEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 4 TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC---VCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 4 ~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
.++++++++.|+.+++|++.................... ...... +...+.+++|+|++ ++++|+.|++|++||+
T Consensus 135 ~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~ 212 (393)
T d1sq9a_ 135 LSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMT-PSQFATSVDISERG-LIATGFNNGTVQISEL 212 (393)
T ss_dssp -CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSS-SCCCCCEEEECTTS-EEEEECTTSEEEEEET
T ss_pred cccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccC-CCCcEEEEEECCCC-EEEEEeCCCcEEEEee
Confidence 357899999999999999864332211111111111111 112222 45678999999987 8899999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCc---EEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGD---VKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~---v~~wd~~~~~ 137 (138)
..+. ...... ......+|...|++++|+|+ +++|++++.|++ |++||+++++
T Consensus 213 ~~~~---~~~~~~-~~~~l~~h~~~V~~l~~spd-g~~l~sgs~D~t~~~i~lwd~~~g~ 267 (393)
T d1sq9a_ 213 STLR---PLYNFE-SQHSMINNSNSIRSVKFSPQ-GSLLAIAHDSNSFGCITLYETEFGE 267 (393)
T ss_dssp TTTE---EEEEEE-CCC---CCCCCEEEEEECSS-TTEEEEEEEETTEEEEEEEETTTCC
T ss_pred cccc---cccccc-cccccccccceEEEcccccc-cceeeeecCCCCcceeeecccccce
Confidence 8654 111111 12233478999999999999 999999999875 8999998654
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=6.7e-17 Score=97.52 Aligned_cols=106 Identities=20% Similarity=0.435 Sum_probs=81.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
++++|++||||+.||+|+|||+... +++..+.+ |...|.+++| ++.+|++|+.|+.|++|++
T Consensus 21 ~~~d~~~l~sgs~Dg~i~vWd~~~~---------------~~~~~l~~-H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~ 82 (293)
T d1p22a2 21 LQYDDQKIVSGLRDNTIKIWDKNTL---------------ECKRILTG-HTGSVLCLQY--DERVIITGSSDSTVRVWDV 82 (293)
T ss_dssp EECCSSEEEEEESSSCEEEEESSSC---------------CEEEEECC-CSSCEEEEEC--CSSEEEEEETTSCEEEEES
T ss_pred EEEcCCEEEEEeCCCeEEEEECCCC---------------cEEEEEec-CCCCEeeeec--ccceeeccccccccccccc
Confidence 3678999999999999999997433 56788888 8999999887 5779999999999999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
..+. .......+.. ....+.+. ...++++..++.+.+|+.....
T Consensus 83 ~~~~----------~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 126 (293)
T d1p22a2 83 NTGE----------MLNTLIHHCE--AVLHLRFN-NGMMVTCSKDRSIAVWDMASPT 126 (293)
T ss_dssp SSCC----------EEEEECCCCS--CEEEEECC-TTEEEEEETTSCEEEEECSSSS
T ss_pred cccc----------cccccccccc--cccccccc-ccceeecccccceeEeeccccc
Confidence 8765 2222212222 22334455 7789999999999999987653
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.75 E-value=3.1e-17 Score=102.04 Aligned_cols=106 Identities=8% Similarity=0.005 Sum_probs=85.8
Q ss_pred Ccc-CCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCC--cEEE
Q psy14817 1 MIQ-TGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD--AIRI 77 (138)
Q Consensus 1 ~s~-~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~--~i~i 77 (138)
||| ||+++|+++. +.|++|+.... ..+ .+ . |...|.+++|+|+|+.|++++.+. .|++
T Consensus 10 fSP~dG~~~a~~~~-g~v~v~d~~~~---------------~~~-~~-~-~~~~v~~~~~spDg~~l~~~~~~~g~~v~v 70 (360)
T d1k32a3 10 FSPLDGDLIAFVSR-GQAFIQDVSGT---------------YVL-KV-P-EPLRIRYVRRGGDTKVAFIHGTREGDFLGI 70 (360)
T ss_dssp EEECGGGCEEEEET-TEEEEECTTSS---------------BEE-EC-S-CCSCEEEEEECSSSEEEEEEEETTEEEEEE
T ss_pred ccCCCCCEEEEEEC-CeEEEEECCCC---------------cEE-Ec-c-CCCCEEEEEECCCCCEEEEEEcCCCCEEEE
Confidence 789 9999999875 79999997432 112 22 4 788999999999999877665443 7999
Q ss_pred EeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 78 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
||...+. .. ....|...+..++|+|+ +.+|++++.++.+++|++.+++
T Consensus 71 ~d~~~~~----------~~-~~~~~~~~v~~~~~spd-g~~l~~~~~~~~~~~~~~~~~~ 118 (360)
T d1k32a3 71 YDYRTGK----------AE-KFEENLGNVFAMGVDRN-GKFAVVANDRFEIMTVDLETGK 118 (360)
T ss_dssp EETTTCC----------EE-ECCCCCCSEEEEEECTT-SSEEEEEETTSEEEEEETTTCC
T ss_pred EECCCCc----------EE-EeeCCCceEEeeeeccc-ccccceeccccccccccccccc
Confidence 9998765 33 33478899999999999 9999999999999999998764
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=5.9e-18 Score=102.24 Aligned_cols=109 Identities=17% Similarity=0.236 Sum_probs=79.8
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
++++..+++++.|+.|++||++.. ..+..+.. +...+.. +.+++.++++++.|+.|++||+.
T Consensus 185 ~~~~~~l~~~~~dg~i~i~d~~~~---------------~~~~~~~~-~~~~v~~--~~~~~~~l~sg~~dg~i~iwd~~ 246 (293)
T d1p22a2 185 QYRDRLVVSGSSDNTIRLWDIECG---------------ACLRVLEG-HEELVRC--IRFDNKRIVSGAYDGKIKVWDLV 246 (293)
T ss_dssp EEETTEEEEEETTSCEEEEETTTC---------------CEEEEECC-CSSCEEE--EECCSSEEEEEETTSCEEEEEHH
T ss_pred cCCCCeEEEecCCCEEEEEecccc---------------eeeeeecc-cceeeee--ccccceEEEEEcCCCEEEEEECC
Confidence 346778999999999999997543 33566666 6666665 45677899999999999999987
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEE
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd 132 (138)
........... .....+.+|...|++++|+ +.+|++++.|++|++||
T Consensus 247 ~~~~~~~~~~~-~~~~~~~~H~~~V~~v~~d---~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 247 AALDPRAPAGT-LCLRTLVEHSGRVFRLQFD---EFQIVSSSHDDTILIWD 293 (293)
T ss_dssp HHTSTTSCTTT-TEEEEECCCSSCCCCEEEC---SSCEEECCSSSEEEEEC
T ss_pred CCccccccCCc-eeeEEecCCCCCEEEEEEc---CCEEEEEecCCEEEEeC
Confidence 54311111111 1233345899999999984 56899999999999997
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.72 E-value=8.4e-17 Score=98.80 Aligned_cols=88 Identities=13% Similarity=0.055 Sum_probs=70.2
Q ss_pred EeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEE
Q psy14817 42 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLAS 121 (138)
Q Consensus 42 ~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 121 (138)
.+...++ |...|++|+|+|++.+|++|+.|++|+|||+.... ... .......|...|.+++|+|+.+.+|++
T Consensus 3 ~v~~~~~-h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~---~~~----~~~~~~~h~~~V~~v~f~~~~~~~l~s 74 (342)
T d1yfqa_ 3 IVQIEQA-PKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQA---KNV----DLLQSLRYKHPLLCCNFIDNTDLQIYV 74 (342)
T ss_dssp EEECSSC-CSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTT---TEE----EEEEEEECSSCEEEEEEEESSSEEEEE
T ss_pred eEEcCCC-CCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCC---cce----EEEEecCCCCCEEEEEEeCCCCCEEEE
Confidence 3444455 89999999999999999999999999999998654 111 111223688999999999974668999
Q ss_pred EeCCCcEEEEEcCCCC
Q psy14817 122 CSDDGDVKLWQIKLEN 137 (138)
Q Consensus 122 ~~~d~~v~~wd~~~~~ 137 (138)
|+.|+.|++|++....
T Consensus 75 g~~d~~v~~w~~~~~~ 90 (342)
T d1yfqa_ 75 GTVQGEILKVDLIGSP 90 (342)
T ss_dssp EETTSCEEEECSSSSS
T ss_pred cccccceeeeeccccc
Confidence 9999999999987653
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.70 E-value=9.8e-16 Score=94.59 Aligned_cols=106 Identities=25% Similarity=0.380 Sum_probs=88.8
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccC
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 82 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~ 82 (138)
+++++++++..|+.|++||+... +.+....+ +...+.++.+++.+..+++++.|+.|++|++..
T Consensus 169 ~~~~~~~~~~~d~~i~~~d~~~~---------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~ 232 (355)
T d1nexb2 169 GHGNIVVSGSYDNTLIVWDVAQM---------------KCLYILSG-HTDRIYSTIYDHERKRCISASMDTTIRIWDLEN 232 (355)
T ss_dssp EETTEEEEEETTSCEEEEETTTT---------------EEEEEECC-CSSCEEEEEEETTTTEEEEEETTSCEEEEETTT
T ss_pred cccceeeeecccceeeeeecccc---------------cceeeeec-cccccccccccccceeeecccccceEEeeeccc
Confidence 56889999999999999997433 44666666 678899999999999999999999999999987
Q ss_pred CCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 83 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
.. ......+|...|.+++++ +++|++++.|+.|++||+++..
T Consensus 233 ~~----------~~~~~~~h~~~v~~~~~~---~~~l~~~~~dg~i~iwd~~~~~ 274 (355)
T d1nexb2 233 GE----------LMYTLQGHTALVGLLRLS---DKFLVSAAADGSIRGWDANDYS 274 (355)
T ss_dssp CC----------EEEEECCCSSCCCEEEEC---SSEEEEECTTSEEEEEETTTCC
T ss_pred cc----------cccccccccccccccccc---cceeeeeecccccccccccccc
Confidence 76 444556888999999885 4689999999999999987653
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.69 E-value=2.8e-16 Score=97.64 Aligned_cols=109 Identities=5% Similarity=-0.064 Sum_probs=87.5
Q ss_pred CccCCCeEEEeeCCC--cEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRLATCSDDA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~ 78 (138)
|||||++|++++.+. .|++||..... ...+.. |...+.+++|+|++.++++++.++.+++|
T Consensus 50 ~spDg~~l~~~~~~~g~~v~v~d~~~~~----------------~~~~~~-~~~~v~~~~~spdg~~l~~~~~~~~~~~~ 112 (360)
T d1k32a3 50 RGGDTKVAFIHGTREGDFLGIYDYRTGK----------------AEKFEE-NLGNVFAMGVDRNGKFAVVANDRFEIMTV 112 (360)
T ss_dssp ECSSSEEEEEEEETTEEEEEEEETTTCC----------------EEECCC-CCCSEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ECCCCCEEEEEEcCCCCEEEEEECCCCc----------------EEEeeC-CCceEEeeeecccccccceeccccccccc
Confidence 799999998777654 79999975432 344555 78899999999999999999999999999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe----------CCCcEEEEEcCCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS----------DDGDVKLWQIKLEN 137 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~----------~d~~v~~wd~~~~~ 137 (138)
++.... .......+...+.+++|+|+ +++|+.+. .++.+++||+.+++
T Consensus 113 ~~~~~~----------~~~~~~~~~~~~~~~~~spd-g~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~ 170 (360)
T d1k32a3 113 DLETGK----------PTVIERSREAMITDFTISDN-SRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 170 (360)
T ss_dssp ETTTCC----------EEEEEECSSSCCCCEEECTT-SCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred cccccc----------eeeeeecccccccchhhccc-eeeeeeeccccccceeeccccceeeeccccCc
Confidence 998776 44445577788999999999 88887543 45568999988753
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.64 E-value=1.6e-15 Score=97.06 Aligned_cols=108 Identities=6% Similarity=-0.148 Sum_probs=81.7
Q ss_pred eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCC
Q psy14817 7 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 86 (138)
Q Consensus 7 ~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~ 86 (138)
++++.+.|++|+|||+... +.+.++.. + ..+..++|+|+|+++++++.|+++++||+..+.
T Consensus 34 ~~V~~~~dg~v~vwD~~t~---------------~~~~~l~~-g-~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~-- 94 (426)
T d1hzua2 34 FSVTLRDAGQIALVDGDSK---------------KIVKVIDT-G-YAVHISRMSASGRYLLVIGRDARIDMIDLWAKE-- 94 (426)
T ss_dssp EEEEETTTTEEEEEETTTC---------------SEEEEEEC-C-SSEEEEEECTTSCEEEEEETTSEEEEEETTSSS--
T ss_pred EEEEEcCCCEEEEEECCCC---------------cEEEEEeC-C-CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCc--
Confidence 5688999999999997443 45777776 4 468999999999999999999999999998765
Q ss_pred CceeeeeeeeeeecccccceeEEEEccCCCCEE-EEEeCCCcEEEEEcCCCC
Q psy14817 87 SDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGML-ASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~d~~v~~wd~~~~~ 137 (138)
..... .......|...+.++.|+|+ ++++ +++..++.+++||..+++
T Consensus 95 -~~~~~--~i~~~~~~~~~~~s~~~spD-G~~l~v~~~~~~~v~i~d~~~~~ 142 (426)
T d1hzua2 95 -PTKVA--EIKIGIEARSVESSKFKGYE-DRYTIAGAYWPPQFAIMDGETLE 142 (426)
T ss_dssp -CEEEE--EEECCSEEEEEEECCSTTCT-TTEEEEEEEESSEEEEEETTTCC
T ss_pred -eeEEE--EEeCCCCCcceEEeeeecCC-CCEEEEeecCCCeEEEEcCCccc
Confidence 11111 11222356667778888999 8776 555579999999987754
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.62 E-value=4e-15 Score=95.57 Aligned_cols=107 Identities=5% Similarity=-0.167 Sum_probs=81.1
Q ss_pred EEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCC
Q psy14817 8 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS 87 (138)
Q Consensus 8 l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~ 87 (138)
+++.+.|+.|.|||.... +++..+.. + ..+..++|+|+|+++++++.|+.+++||+....
T Consensus 35 ~v~~~d~g~v~v~D~~t~---------------~v~~~~~~-g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~--- 94 (432)
T d1qksa2 35 SVTLRDAGQIALIDGSTY---------------EIKTVLDT-G-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKE--- 94 (432)
T ss_dssp EEEETTTTEEEEEETTTC---------------CEEEEEEC-S-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSS---
T ss_pred EEEEcCCCEEEEEECCCC---------------cEEEEEeC-C-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCC---
Confidence 589999999999996433 55777776 4 469999999999999999999999999998654
Q ss_pred ceeeeeeeeeeecccccceeEEEEccCCCCEE-EEEeCCCcEEEEEcCCCC
Q psy14817 88 DMVSFDLVHTEHRAHNQDVNCVAWNPVVPGML-ASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~d~~v~~wd~~~~~ 137 (138)
..... .......+...+.+..|+|+ +++| ++++.++.+++||..+++
T Consensus 95 ~~~~~--~i~~~~~~~~~~~s~~~SpD-G~~l~vs~~~~~~v~i~d~~t~~ 142 (432)
T d1qksa2 95 PTTVA--EIKIGSEARSIETSKMEGWE-DKYAIAGAYWPPQYVIMDGETLE 142 (432)
T ss_dssp CCEEE--EEECCSEEEEEEECCSTTCT-TTEEEEEEEETTEEEEEETTTCC
T ss_pred ceEEE--EEecCCCCCCeEEecccCCC-CCEEEEEcCCCCeEEEEeCcccc
Confidence 11111 11112345566677778899 8765 778889999999988765
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.52 E-value=4.1e-14 Score=90.83 Aligned_cols=121 Identities=10% Similarity=-0.039 Sum_probs=79.8
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCe-EEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDL-IATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~-~~s~~~d~~i~i~~ 79 (138)
|||||+++++++.|+.|++||+..... .....+..... |.+.+.+..|+|||++ ++++..++.+++||
T Consensus 69 fSpDG~~l~~~s~dg~v~~~d~~t~~~----------~~~~~i~~~~~-~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d 137 (432)
T d1qksa2 69 LSASGRYLFVIGRDGKVNMIDLWMKEP----------TTVAEIKIGSE-ARSIETSKMEGWEDKYAIAGAYWPPQYVIMD 137 (432)
T ss_dssp ECTTSCEEEEEETTSEEEEEETTSSSC----------CEEEEEECCSE-EEEEEECCSTTCTTTEEEEEEEETTEEEEEE
T ss_pred ECCCCCEEEEEcCCCCEEEEEeeCCCc----------eEEEEEecCCC-CCCeEEecccCCCCCEEEEEcCCCCeEEEEe
Confidence 799999999999999999999754432 11122232233 4556666778889996 57788899999999
Q ss_pred ccCCCCCCceeeeeee----eeeecccccceeEEEEccCCCCE-EEEEeCCCcEEEEEcCCC
Q psy14817 80 ENPEAGDSDMVSFDLV----HTEHRAHNQDVNCVAWNPVVPGM-LASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~-l~~~~~d~~v~~wd~~~~ 136 (138)
...++ ........ ......+......+.++|+ +.. +++...++.|.+||....
T Consensus 138 ~~t~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d-g~~~~vs~~~~~~i~~~d~~~~ 195 (432)
T d1qksa2 138 GETLE---PKKIQSTRGMTYDEQEYHPEPRVAAILASHY-RPEFIVNVKETGKILLVDYTDL 195 (432)
T ss_dssp TTTCC---EEEEEECCEECTTTCCEESCCCEEEEEECSS-SSEEEEEETTTTEEEEEETTCS
T ss_pred Ccccc---ceeeeccCCccccceeccCCCceeEEEECCC-CCEEEEEEccCCeEEEEEccCC
Confidence 98765 00000000 0001123456677888998 554 566777889999987654
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.50 E-value=2.8e-13 Score=83.46 Aligned_cols=115 Identities=3% Similarity=-0.136 Sum_probs=81.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeE-EEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~-~s~~~d~~i~i~~ 79 (138)
|++++++|++++.|++|.+||+... +.+.++...+...+.++.|+|+|+++ +++..++.|.+||
T Consensus 4 ~~~~~~~l~~~~~~~~v~v~D~~t~---------------~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d 68 (346)
T d1jmxb_ 4 LKAGHEYMIVTNYPNNLHVVDVASD---------------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGID 68 (346)
T ss_dssp CCTTCEEEEEEETTTEEEEEETTTT---------------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCCCcEEEEEcCCCEEEEEECCCC---------------CEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEe
Confidence 6899999999999999999997433 55777664356678899999999965 5666789999999
Q ss_pred ccCCCCCCceeeeeeee-eeecccccceeEEEEccCCCCEEEEEe------------CCCcEEEEEcCCC
Q psy14817 80 ENPEAGDSDMVSFDLVH-TEHRAHNQDVNCVAWNPVVPGMLASCS------------DDGDVKLWQIKLE 136 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~------------~d~~v~~wd~~~~ 136 (138)
+..+. ....... .....+...+..++++|+ +.+++.++ .+..+.+|+..++
T Consensus 69 ~~t~~-----~~~~~~~~~~~~~~~~~~~~v~~s~D-G~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~ 132 (346)
T d1jmxb_ 69 LDTCK-----NTFHANLSSVPGEVGRSMYSFAISPD-GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADG 132 (346)
T ss_dssp TTTTE-----EEEEEESCCSTTEEEECSSCEEECTT-SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGG
T ss_pred CccCe-----eeeeecccccccccCCceEEEEEecC-CCEEEEEecCCcceeeeeccCcceEEEEecccc
Confidence 98764 0000000 000112235678899999 88776664 4777888887654
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.39 E-value=8.2e-12 Score=76.59 Aligned_cols=107 Identities=7% Similarity=0.120 Sum_probs=74.1
Q ss_pred eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEE-eeCCCcEEEEeccCCCC
Q psy14817 7 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT-ACGDDAIRIFKENPEAG 85 (138)
Q Consensus 7 ~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s-~~~d~~i~i~~~~~~~~ 85 (138)
.++++++|++|++|++..... .+.+..+. |.+.+..++|+|+|++|++ +..|+.|++|++.....
T Consensus 6 v~v~~~~~~~I~v~~~~~~~~------------l~~~~~~~--~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~ 71 (333)
T d1ri6a_ 6 VYIASPESQQIHVWNLNHEGA------------LTLTQVVD--VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDG 71 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTSC------------EEEEEEEE--CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTC
T ss_pred EEEECCCCCcEEEEEEcCCCC------------eEEEEEEc--CCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCC
Confidence 468889999999999854322 13334333 5678999999999997754 45589999999986541
Q ss_pred CCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-CCcEEEEEcCC
Q psy14817 86 DSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-DGDVKLWQIKL 135 (138)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~v~~wd~~~ 135 (138)
.. ...........+..++|+|+ +++|++++. ++.+.+|+...
T Consensus 72 ---~~----~~~~~~~~~~~p~~l~~spD-g~~l~v~~~~~~~v~~~~~~~ 114 (333)
T d1ri6a_ 72 ---AL----TFAAESALPGSLTHISTDHQ-GQFVFVGSYNAGNVSVTRLED 114 (333)
T ss_dssp ---CE----EEEEEEECSSCCSEEEECTT-SSEEEEEETTTTEEEEEEEET
T ss_pred ---cE----EEeeecccCCCceEEEEcCC-CCEEeecccCCCceeeecccc
Confidence 10 01111133456778999999 998888875 67888887643
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.39 E-value=6.3e-13 Score=84.92 Aligned_cols=73 Identities=11% Similarity=-0.061 Sum_probs=52.9
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeE-EEeeCCCcEEEEe
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~-~s~~~d~~i~i~~ 79 (138)
|||||+++++++.|++|++||+...... ....+....+ |...+.++.|+|+|+++ +++..++.+++||
T Consensus 69 fSPDGk~l~~~~~d~~v~vwd~~t~~~~----------~~~~i~~~~~-~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d 137 (426)
T d1hzua2 69 MSASGRYLLVIGRDARIDMIDLWAKEPT----------KVAEIKIGIE-ARSVESSKFKGYEDRYTIAGAYWPPQFAIMD 137 (426)
T ss_dssp ECTTSCEEEEEETTSEEEEEETTSSSCE----------EEEEEECCSE-EEEEEECCSTTCTTTEEEEEEEESSEEEEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEccCCcee----------EEEEEeCCCC-CcceEEeeeecCCCCEEEEeecCCCeEEEEc
Confidence 7999999999999999999998654320 0011222223 55566777888999965 5556889999999
Q ss_pred ccCCC
Q psy14817 80 ENPEA 84 (138)
Q Consensus 80 ~~~~~ 84 (138)
.....
T Consensus 138 ~~~~~ 142 (426)
T d1hzua2 138 GETLE 142 (426)
T ss_dssp TTTCC
T ss_pred CCccc
Confidence 98765
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.38 E-value=8.7e-12 Score=76.38 Aligned_cols=110 Identities=10% Similarity=-0.040 Sum_probs=76.3
Q ss_pred CeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC-CccCeEEEEEecCCCeE-EEeeCCCcEEEEeccCC
Q psy14817 6 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGRTIYDISWCHLTDLI-ATACGDDAIRIFKENPE 83 (138)
Q Consensus 6 ~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~-~s~~~d~~i~i~~~~~~ 83 (138)
+++++++.|+.|.|||+... +.+..+... +...+.+++++|+|+++ ++++.++.|.+||+..+
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~---------------~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~ 66 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKM---------------AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTG 66 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT---------------EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTC
T ss_pred eEEEEEcCCCEEEEEECCCC---------------eEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 58999999999999997443 456666542 23467899999999965 56778999999999876
Q ss_pred CCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe------------CCCcEEEEEcCCC
Q psy14817 84 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS------------DDGDVKLWQIKLE 136 (138)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~------------~d~~v~~wd~~~~ 136 (138)
+ ............+...+..++++|+ +..++.++ .+..+.+||..++
T Consensus 67 ~-----~~~~~~~~~~~~~~~~~~~v~~s~d-g~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 125 (337)
T d1pbyb_ 67 E-----TLGRIDLSTPEERVKSLFGAALSPD-GKTLAIYESPVRLELTHFEVQPTRVALYDAETL 125 (337)
T ss_dssp C-----EEEEEECCBTTEEEECTTCEEECTT-SSEEEEEEEEEEECSSCEEECCCEEEEEETTTT
T ss_pred c-----EEEEEecCCCcccccceeeEEEcCC-CcEEEEeecCCcceeeeccccccceeeccccCC
Confidence 5 1010111111122345678899999 88877665 4567888887664
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.32 E-value=5.2e-11 Score=71.91 Aligned_cols=101 Identities=10% Similarity=0.075 Sum_probs=74.3
Q ss_pred EEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeE-EEeeCCCcEEEEeccCCCCC
Q psy14817 8 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACGDDAIRIFKENPEAGD 86 (138)
Q Consensus 8 l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~-~s~~~d~~i~i~~~~~~~~~ 86 (138)
+++++.|++|.+||+... +.+.++.. ...+..++|+|+|+++ +++..++.|++||+....
T Consensus 5 yV~~~~~~~v~v~D~~t~---------------~~~~~i~~--g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~-- 65 (301)
T d1l0qa2 5 YIANSESDNISVIDVTSN---------------KVTATIPV--GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNN-- 65 (301)
T ss_dssp EEEETTTTEEEEEETTTT---------------EEEEEEEC--SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE--
T ss_pred EEEECCCCEEEEEECCCC---------------eEEEEEEC--CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCc--
Confidence 567889999999996433 45666654 3567899999999965 567788999999998765
Q ss_pred CceeeeeeeeeeecccccceeEEEEccCCCC-EEEEEeCCCcEEEEEcCCCC
Q psy14817 87 SDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~d~~v~~wd~~~~~ 137 (138)
.......+ ..+..+.++++ +. .++++..+..+.+|+..+++
T Consensus 66 --------~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 107 (301)
T d1l0qa2 66 --------VIATVPAG-SSPQGVAVSPD-GKQVYVTNMASSTLSVIDTTSNT 107 (301)
T ss_dssp --------EEEEEECS-SSEEEEEECTT-SSEEEEEETTTTEEEEEETTTTE
T ss_pred --------eeeeeecc-ccccccccccc-cccccccccccceeeecccccce
Confidence 22222223 45688999998 65 55566678889999987653
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.30 E-value=8.8e-11 Score=70.89 Aligned_cols=107 Identities=10% Similarity=0.132 Sum_probs=78.8
Q ss_pred CccCCCeE-EEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC-eEEEeeCCCcEEEE
Q psy14817 1 MIQTGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l-~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~d~~i~i~ 78 (138)
|+|+|++| ++++.++.|++||+... +.+..+.. + ..+..+.+++++. .++++..++.+.+|
T Consensus 39 ~spdG~~l~v~~~~~~~i~v~d~~t~---------------~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (301)
T d1l0qa2 39 ISPDGTKVYVANAHSNDVSIIDTATN---------------NVIATVPA-G-SSPQGVAVSPDGKQVYVTNMASSTLSVI 101 (301)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEETTTT---------------EEEEEEEC-S-SSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EeCCCCEEEEEECCCCEEEEEECCCC---------------ceeeeeec-c-ccccccccccccccccccccccceeeec
Confidence 68999976 57788999999997433 45666665 3 3578899999998 45556677789999
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEE-EEEeCCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGML-ASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~d~~v~~wd~~~~ 136 (138)
+..... ..... .+...+..+.++|+ +..+ +++..+..+.+|+..+.
T Consensus 102 ~~~~~~----------~~~~~-~~~~~~~~~~~~~d-g~~~~~~~~~~~~~~~~~~~~~ 148 (301)
T d1l0qa2 102 DTTSNT----------VAGTV-KTGKSPLGLALSPD-GKKLYVTNNGDKTVSVINTVTK 148 (301)
T ss_dssp ETTTTE----------EEEEE-ECSSSEEEEEECTT-SSEEEEEETTTTEEEEEETTTT
T ss_pred ccccce----------eeeec-cccccceEEEeecC-CCeeeeeeccccceeeeecccc
Confidence 988664 22222 34456788999999 6655 56667888999998765
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.21 E-value=7.9e-10 Score=67.47 Aligned_cols=74 Identities=8% Similarity=-0.036 Sum_probs=57.5
Q ss_pred CccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEE
Q psy14817 50 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 129 (138)
Q Consensus 50 ~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~ 129 (138)
+...+..+.+++++.+++.+ ++.+++||+.... ..... .+...+.+++|+|+ +.+|++++.|++|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~----------~~~~~-~~~~~~~~~~~s~d-G~~l~v~~~~~~i~ 304 (337)
T d1pbyb_ 239 MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNA----------SIKRV-PLPHSYYSVNVSTD-GSTVWLGGALGDLA 304 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTE----------EEEEE-ECSSCCCEEEECTT-SCEEEEESBSSEEE
T ss_pred CCcceEEEEecccceEEEEc--cccEEEEECCCCc----------EEEEE-cCCCCEEEEEECCC-CCEEEEEeCCCcEE
Confidence 34556677788888777655 4789999998765 22222 34567899999999 99999999999999
Q ss_pred EEEcCCCC
Q psy14817 130 LWQIKLEN 137 (138)
Q Consensus 130 ~wd~~~~~ 137 (138)
+||..+.+
T Consensus 305 v~D~~t~~ 312 (337)
T d1pbyb_ 305 AYDAETLE 312 (337)
T ss_dssp EEETTTCC
T ss_pred EEECCCCc
Confidence 99998765
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.19 E-value=3e-10 Score=69.49 Aligned_cols=114 Identities=7% Similarity=0.005 Sum_probs=75.5
Q ss_pred CccCCCeEE-EeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC-CCcEEEE
Q psy14817 1 MIQTGSRLA-TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-DDAIRIF 78 (138)
Q Consensus 1 ~s~~~~~l~-t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~-d~~i~i~ 78 (138)
|||||++|+ ++..|+.|++|++...... .+...... +...+..++|+|+|+++++++. ++.+.+|
T Consensus 44 ~spDG~~L~v~~~~d~~i~~~~i~~~~~~-----------~~~~~~~~--~~~~p~~l~~spDg~~l~v~~~~~~~v~~~ 110 (333)
T d1ri6a_ 44 VSPDKRYLYVGVRPEFRVLAYRIAPDDGA-----------LTFAAESA--LPGSLTHISTDHQGQFVFVGSYNAGNVSVT 110 (333)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTTCC-----------EEEEEEEE--CSSCCSEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EeCCCCEEEEEECCCCeEEEEEEeCCCCc-----------EEEeeecc--cCCCceEEEEcCCCCEEeecccCCCceeee
Confidence 689999884 5556899999998543221 11222221 3445678999999998887775 6689998
Q ss_pred eccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe-CCCcEEEEEcCCC
Q psy14817 79 KENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS-DDGDVKLWQIKLE 136 (138)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~v~~wd~~~~ 136 (138)
+..... . ........+...+.++.++|+ ++.++.++ .+..+.+|+....
T Consensus 111 ~~~~~~-----~---~~~~~~~~~~~~~~~v~~s~d-~~~~~~~~~~~~~i~~~~~~~~ 160 (333)
T d1ri6a_ 111 RLEDGL-----P---VGVVDVVEGLDGCHSANISPD-NRTLWVPALKQDRICLFTVSDD 160 (333)
T ss_dssp EEETTE-----E---EEEEEEECCCTTBCCCEECTT-SSEEEEEEGGGTEEEEEEECTT
T ss_pred cccccc-----c---eecccccCCCccceEEEeeec-ceeeeccccccceeeEEEeccC
Confidence 877543 0 011112245567888999999 77776666 4566888887543
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.15 E-value=2.2e-10 Score=70.21 Aligned_cols=75 Identities=7% Similarity=-0.004 Sum_probs=59.4
Q ss_pred CccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEE
Q psy14817 50 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 129 (138)
Q Consensus 50 ~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~ 129 (138)
+...+..+.+++++..++.... +.+.+||....+ ..... .+...+.+++|+|+ +.++++++.|+.|+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~-~~v~v~d~~~~~----------~~~~~-~~~~~~~~va~s~D-G~~l~v~~~d~~v~ 316 (346)
T d1jmxb_ 250 LTELYFTGLRSPKDPNQIYGVL-NRLAKYDLKQRK----------LIKAA-NLDHTYYCVAFDKK-GDKLYLGGTFNDLA 316 (346)
T ss_dssp CSSCEEEEEECSSCTTEEEEEE-SEEEEEETTTTE----------EEEEE-ECSSCCCEEEECSS-SSCEEEESBSSEEE
T ss_pred ccceeEEEEEeCCCCEEEEecC-CeEEEEECCCCc----------EEEEE-cCCCCEEEEEEcCC-CCEEEEEeCCCcEE
Confidence 5677888999998887776654 479999998765 22222 34457899999999 99999999999999
Q ss_pred EEEcCCCC
Q psy14817 130 LWQIKLEN 137 (138)
Q Consensus 130 ~wd~~~~~ 137 (138)
+||.++.+
T Consensus 317 v~D~~t~~ 324 (346)
T d1jmxb_ 317 VFNPDTLE 324 (346)
T ss_dssp EEETTTTE
T ss_pred EEECccCC
Confidence 99998765
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.06 E-value=3e-10 Score=70.17 Aligned_cols=111 Identities=7% Similarity=0.057 Sum_probs=71.5
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC---------CccCeEEEEEecCCCeEEEeeCC
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH---------HGRTIYDISWCHLTDLIATACGD 72 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~v~~v~~~~~~~~~~s~~~d 72 (138)
++++..++.++.++.+.+|++..... ..+.....+ .......+.+++++..++....+
T Consensus 203 ~~~~~~~~~~~~~~~~~v~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~ 269 (355)
T d2bbkh_ 203 SQKAGRLVWPTYTGKIHQIDLSSGDA-------------KFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQ 269 (355)
T ss_dssp ETTTTEEEEEBTTSEEEEEECTTSSC-------------EECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEE
T ss_pred cCCCCeEEEecCCCeEEEEecCCCcE-------------EEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEecc
Confidence 34667788889999999999754322 111111110 01122347788888865554332
Q ss_pred ----------CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCC--EEEEEeCCCcEEEEEcCCCC
Q psy14817 73 ----------DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG--MLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 73 ----------~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~l~~~~~d~~v~~wd~~~~~ 137 (138)
..|.+||...++ ..... .+...+.+++|+|+ ++ ++++++.|++|.+||+++++
T Consensus 270 ~~~~~~~~~~~~v~v~d~~t~~----------~~~~~-~~~~~~~~~a~spD-G~~~l~v~~~~d~~i~v~D~~tg~ 334 (355)
T d2bbkh_ 270 RDEWRHKTASRFVVVLDAKTGE----------RLAKF-EMGHEIDSINVSQD-EKPLLYALSTGDKTLYIHDAESGE 334 (355)
T ss_dssp CCTTCTTSCEEEEEEEETTTCC----------EEEEE-EEEEEECEEEECCS-SSCEEEEEETTTTEEEEEETTTCC
T ss_pred CCceeecCCCCeEEEEeCCCCc----------EEEEe-cCCCCEEEEEEcCC-CCeEEEEEECCCCEEEEEECCCCC
Confidence 368999988765 22222 23456889999999 76 45667789999999998876
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.00 E-value=2.4e-09 Score=68.85 Aligned_cols=108 Identities=16% Similarity=0.182 Sum_probs=77.7
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEe---EEecCCCccCeEEEEEecCCCeEEEeeC------
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV---CTLSGHHGRTIYDISWCHLTDLIATACG------ 71 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~v~~~~~~~~~~s~~~------ 71 (138)
|.++++++.. .|+.+.+||...... ..+ ..+.. |...|.++.|+||+++|+.++.
T Consensus 24 W~~d~~~~~~--~~~~~~~~~~~t~~~-------------~~~~~~~~~~~-~~~~i~~~~~SpDg~~i~~~~~~~~~~r 87 (470)
T d2bgra1 24 WISDHEYLYK--QENNILVFNAEYGNS-------------SVFLENSTFDE-FGHSINDYSISPDGQFILLEYNYVKQWR 87 (470)
T ss_dssp ECSSSEEEEE--SSSCEEEEETTTCCE-------------EEEECTTTTTT-SSSCCCEEEECTTSSEEEEEEEEEECSS
T ss_pred eCCCCEEEEE--cCCcEEEEECCCCCE-------------EEEEchhhhhh-ccCccceeEECCCCCEEEEEECCcceee
Confidence 4567776653 578899999765432 111 12333 5578999999999998877643
Q ss_pred ---CCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 72 ---DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 72 ---d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
++.+.+||+..+. .. ....+...+....|+|+ +..++... ++.+.+|+..+++
T Consensus 88 ~s~~~~~~l~d~~~~~----------~~-~l~~~~~~~~~~~~SPD-G~~ia~~~-~~~l~~~~~~~g~ 143 (470)
T d2bgra1 88 HSYTASYDIYDLNKRQ----------LI-TEERIPNNTQWVTWSPV-GHKLAYVW-NNDIYVKIEPNLP 143 (470)
T ss_dssp SCEEEEEEEEETTTTE----------EC-CSSCCCTTEEEEEECSS-TTCEEEEE-TTEEEEESSTTSC
T ss_pred eccCceEEEEECCCCc----------cc-ccccCCccccccccccC-cceeeEee-cccceEEECCCCc
Confidence 4578899998765 22 23467778999999999 99988864 6789999887664
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=98.99 E-value=2.4e-08 Score=61.99 Aligned_cols=119 Identities=13% Similarity=0.006 Sum_probs=72.7
Q ss_pred CccCCCeEEEe-----eCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee-----
Q psy14817 1 MIQTGSRLATC-----SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC----- 70 (138)
Q Consensus 1 ~s~~~~~l~t~-----s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~----- 70 (138)
++|+|+.++.. +.++.|.+||... .+.+.++.. +. ...+.|+|+|++++.+.
T Consensus 28 ~spdg~~~~~~~~~~~~~~~~v~v~D~~t---------------g~~~~~~~~-~~--~~~~a~SpDG~~l~va~~~~~~ 89 (373)
T d2madh_ 28 PGADGRRSYINLPAHHSAIIQQWVLDAGS---------------GSILGHVNG-GF--LPNPVAAHSGSEFALASTSFSR 89 (373)
T ss_pred cCCCCCEEEEEcccccCCCceEEEEECCC---------------CCEEEEEeC-CC--CccEEEcCCCCEEEEEeecCCc
Confidence 58999987654 2345688888533 244666655 33 33799999999887764
Q ss_pred -----CCCcEEEEeccCCCCCCc----------------eeeeee------ee---------------eeecccccceeE
Q psy14817 71 -----GDDAIRIFKENPEAGDSD----------------MVSFDL------VH---------------TEHRAHNQDVNC 108 (138)
Q Consensus 71 -----~d~~i~i~~~~~~~~~~~----------------~~~~~~------~~---------------~~~~~~~~~v~~ 108 (138)
.++.|.+||...++.... ...+.. .. .....+.....+
T Consensus 90 ~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (373)
T d2madh_ 90 IAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLSSPTC 169 (373)
T ss_pred ccccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEecccee
Confidence 457799999987651100 000000 00 000122234456
Q ss_pred EEEccCCCCEEEEEeCCCcEEEEEcCCCC
Q psy14817 109 VAWNPVVPGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 109 ~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.++|+....+++.+.|+.+.+|+...++
T Consensus 170 ~~~s~~g~~~~v~~~~dg~~~~~~~~~~~ 198 (373)
T d2madh_ 170 YHIHPGAPSTFYLLCAQGGLAKTDHAGGA 198 (373)
T ss_pred EEEecCCCcEEEEEcCCCeEEEEEcCCce
Confidence 77888834466788899999999976543
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.91 E-value=1.7e-08 Score=62.17 Aligned_cols=114 Identities=10% Similarity=0.003 Sum_probs=71.6
Q ss_pred ccCCCeEEEe-----eCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEe-------
Q psy14817 2 IQTGSRLATC-----SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA------- 69 (138)
Q Consensus 2 s~~~~~l~t~-----s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~------- 69 (138)
+|+|+.++.. +.+..|.+||.... +.+.++.. +. ...++|+|+|+.++..
T Consensus 10 spdg~~~~v~~~~~~~~~~~v~v~D~~tg---------------~~~~~~~~-g~--~~~~a~SpDg~~l~v~~~~~~~~ 71 (355)
T d2bbkh_ 10 APDARRVYVNDPAHFAAVTQQFVIDGEAG---------------RVIGMIDG-GF--LPNPVVADDGSFIAHASTVFSRI 71 (355)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTTT---------------EEEEEEEE-CS--SCEEEECTTSSCEEEEEEEEEET
T ss_pred CCCCCEEEEEecccCCCcCeEEEEECCCC---------------cEEEEEEC-CC--CCceEEcCCCCEEEEEeCCCccc
Confidence 6899987654 34567999996432 45666654 33 3379999999966653
Q ss_pred ---eCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe--CCCcEEEEEcCCCC
Q psy14817 70 ---CGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS--DDGDVKLWQIKLEN 137 (138)
Q Consensus 70 ---~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d~~v~~wd~~~~~ 137 (138)
..++.|++||...+. .....................+.|+|+ +..++.++ .+..+.+|+..+++
T Consensus 72 ~~g~~d~~v~v~D~~t~~---~~~~~~~~~~~~~~~~~~~~~~~~s~d-g~~~~v~~~~~~~~~~~~~~~~~~ 140 (355)
T d2bbkh_ 72 ARGERTDYVEVFDPVTLL---PTADIELPDAPRFLVGTYPWMTSLTPD-GKTLLFYQFSPAPAVGVVDLEGKA 140 (355)
T ss_dssp TEEEEEEEEEEECTTTCC---EEEEEEETTCCCCCBSCCGGGEEECTT-SSEEEEEECSSSCEEEEEETTTTE
T ss_pred cccCCCCEEEEEECCCCC---EEEEEecCCcceeecCCCCceEEEecC-CCeeEEecCCCCceeeeeecCCCc
Confidence 347889999998765 000000000000111234466899999 88776654 46778999987653
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.87 E-value=6.6e-09 Score=66.78 Aligned_cols=113 Identities=13% Similarity=0.120 Sum_probs=71.5
Q ss_pred CccCCCeEEEeeC---------CCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC
Q psy14817 1 MIQTGSRLATCSD---------DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 71 (138)
Q Consensus 1 ~s~~~~~l~t~s~---------d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~ 71 (138)
|||||++|+.++. ++.+.+||+.... +..+.. +...+..+.|+|+|..++.. .
T Consensus 69 ~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~----------------~~~l~~-~~~~~~~~~~SPDG~~ia~~-~ 130 (470)
T d2bgra1 69 ISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ----------------LITEER-IPNNTQWVTWSPVGHKLAYV-W 130 (470)
T ss_dssp ECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE----------------ECCSSC-CCTTEEEEEECSSTTCEEEE-E
T ss_pred ECCCCCEEEEEECCcceeeeccCceEEEEECCCCc----------------cccccc-CCccccccccccCcceeeEe-e
Confidence 6999999998854 5677899975431 334555 67789999999999988886 4
Q ss_pred CCcEEEEeccCCCCCCce------eeeeeeee--eecccccceeEEEEccCCCCEEEEEeCCCc-EEEEE
Q psy14817 72 DDAIRIFKENPEAGDSDM------VSFDLVHT--EHRAHNQDVNCVAWNPVVPGMLASCSDDGD-VKLWQ 132 (138)
Q Consensus 72 d~~i~i~~~~~~~~~~~~------~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~-v~~wd 132 (138)
++.+.+|+...+...... ....-... ...........+.|+|+ ++.|+....|.. +..++
T Consensus 131 ~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPD-Gk~ia~~~~d~~~v~~~~ 199 (470)
T d2bgra1 131 NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPN-GTFLAYAQFNDTEVPLIE 199 (470)
T ss_dssp TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTT-SSEEEEEEEECTTCCEEE
T ss_pred cccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCC-CCccceeEecCCcCceEE
Confidence 668999988866510000 00000000 00012234566889999 999988876544 55444
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=98.84 E-value=1.5e-07 Score=58.28 Aligned_cols=61 Identities=7% Similarity=0.085 Sum_probs=45.8
Q ss_pred eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCC--EEEEEeCCCcEEEEEcCCCC
Q psy14817 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG--MLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 65 ~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~l~~~~~d~~v~~wd~~~~~ 137 (138)
.++....++.+.+||...+. ..... .+...+..+.|+|+ ++ ++++++.|+.|++||+.+++
T Consensus 290 ~~~~~~~~~~v~~~d~~t~~----------~~~~~-~~~~~~~~~a~spD-G~~~l~vt~~~d~~v~v~D~~tg~ 352 (373)
T d2madh_ 290 AWKLHAAAKEVTSVTGLVGQ----------TSSQI-SLGHDVDAISVAQD-GGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred eEEeecCCCeEEEEECCCCc----------EEEEe-cCCCCeeEEEECCC-CCEEEEEEeCCCCeEEEEECCCCC
Confidence 34455666788999988765 22222 45677899999999 77 34678899999999999876
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.68 E-value=3.4e-07 Score=56.89 Aligned_cols=52 Identities=4% Similarity=0.033 Sum_probs=35.6
Q ss_pred cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCC--EEEEEeCCCcEEEEEcCCCC
Q psy14817 74 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG--MLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 74 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~l~~~~~d~~v~~wd~~~~~ 137 (138)
.|.+||...++ ..... .....+..+.|+|+ ++ .++++..|+.|++||..+++
T Consensus 295 ~v~v~D~~t~~----------~~~~~-~~~~~~~~~a~spD-G~~~ly~s~~~~~~v~v~D~~tgk 348 (368)
T d1mdah_ 295 NTSSVTASVGQ----------TSGPI-SNGHDSDAIIAAQD-GASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp EEEEEESSSCC----------EEECC-EEEEEECEEEECCS-SSCEEEEEETTTTEEEEEESSSCE
T ss_pred eEEEEECCCCc----------EeEEe-cCCCceeEEEECCC-CCEEEEEEeCCCCeEEEEECCCCC
Confidence 36666666554 22211 23457888999999 75 34666779999999998765
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.57 E-value=6.2e-07 Score=55.70 Aligned_cols=90 Identities=10% Similarity=-0.042 Sum_probs=55.8
Q ss_pred EEeEEecCCCccCeEEEEEecCCCeEEEee----------CCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEE
Q psy14817 41 KCVCTLSGHHGRTIYDISWCHLTDLIATAC----------GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVA 110 (138)
Q Consensus 41 ~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~----------~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 110 (138)
+.+..+.. +.. ..+.|+|+++.++..+ .|+.|.+||..... .....................+.
T Consensus 57 ~~~~~~~~-~~~--~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~---~~~~i~~p~~~~~~~g~~p~~~a 130 (368)
T d1mdah_ 57 VTLGHSLG-AFL--SLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL---PIADIELPDAPRFSVGPRVHIIG 130 (368)
T ss_dssp EEEEEEEE-CTT--CEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC---EEEEEEETTSCSCCBSCCTTSEE
T ss_pred cEEEEEeC-CCC--CcceECCCCCEEEEEcccCccccccccCCeEEEEECCCCc---EeeeecCCccceecccCCccceE
Confidence 45666555 333 3588999999776643 46789999998765 00000000000001122345789
Q ss_pred EccCCCCEEEEEe-CCCcEEEEEcCCCC
Q psy14817 111 WNPVVPGMLASCS-DDGDVKLWQIKLEN 137 (138)
Q Consensus 111 ~~~~~~~~l~~~~-~d~~v~~wd~~~~~ 137 (138)
|+|+ +++++.++ .++.+.+||+.+++
T Consensus 131 ~SpD-Gk~l~va~~~~~~v~~~d~~~~~ 157 (368)
T d1mdah_ 131 NCAS-SACLLFFLFGSSAAAGLSVPGAS 157 (368)
T ss_dssp ECTT-SSCEEEEECSSSCEEEEEETTTE
T ss_pred ECCC-CCEEEEEeCCCCeEEEEECCCCc
Confidence 9999 88777665 57999999987764
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.53 E-value=4.1e-06 Score=50.76 Aligned_cols=110 Identities=14% Similarity=0.058 Sum_probs=76.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
++|||+++++...+++|..|+.... .... .. ....+.++++.++|.++++...++.+..++.
T Consensus 35 v~pdG~l~vt~~~~~~I~~i~p~g~--------------~~~~---~~-~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~ 96 (302)
T d2p4oa1 35 SAPDGTIFVTNHEVGEIVSITPDGN--------------QQIH---AT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSL 96 (302)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTCC--------------EEEE---EE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred ECCCCCEEEEeCCCCEEEEEeCCCC--------------EEEE---Ec-CCCCcceEEEcCCCCeEEEecCCceEEEEEe
Confidence 4789999999999998888874211 1112 22 3457899999999998888888888888876
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
...... . ............+.+.+.++ ++++++.+.++.+..++...+
T Consensus 97 ~~~~~~---~----~~~~~~~~~~~~n~i~~~~~-g~~~v~~~~~~~i~~~~~~~~ 144 (302)
T d2p4oa1 97 VKSDGT---V----ETLLTLPDAIFLNGITPLSD-TQYLTADSYRGAIWLIDVVQP 144 (302)
T ss_dssp ECTTSC---E----EEEEECTTCSCEEEEEESSS-SEEEEEETTTTEEEEEETTTT
T ss_pred cccccc---e----eeccccCCccccceeEEccC-CCEEeeccccccceeeeccCC
Confidence 643310 0 01111133456788999998 888888888888887776654
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=98.24 E-value=3.8e-05 Score=46.83 Aligned_cols=108 Identities=10% Similarity=0.148 Sum_probs=67.5
Q ss_pred eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCC
Q psy14817 7 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 86 (138)
Q Consensus 7 ~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~ 86 (138)
++++-+..+.|..|++..... ....+....+........-.+++..+|.++++....+.|.+|+...+.
T Consensus 190 lyv~d~~~~~i~~~d~~~~g~---------~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~-- 258 (314)
T d1pjxa_ 190 LIVAETPTKKLWSYDIKGPAK---------IENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ-- 258 (314)
T ss_dssp EEEEETTTTEEEEEEEEETTE---------EEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBS--
T ss_pred EEEEeecccceEEeeccCccc---------cceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeCCCCE--
Confidence 455556677777777643221 111122233333223345689999999988887778899999887554
Q ss_pred CceeeeeeeeeeecccccceeEEEEccCCCC-EEEEEeCCCcEEEEEcC
Q psy14817 87 SDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCSDDGDVKLWQIK 134 (138)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~d~~v~~wd~~ 134 (138)
...........+++++|.|+ ++ ++++.+.++.|.-.++.
T Consensus 259 --------~~~~i~~p~~~~t~~afg~d-~~~lyVt~~~~g~i~~~~~~ 298 (314)
T d1pjxa_ 259 --------PKMRIRCPFEKPSNLHFKPQ-TKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp --------CSEEEECSSSCEEEEEECTT-SSEEEEEETTTTEEEEEECS
T ss_pred --------EEEEEECCCCCEEEEEEeCC-CCEEEEEECCCCcEEEEECC
Confidence 22211223456788999998 65 55677778888877764
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=98.12 E-value=5.7e-07 Score=57.43 Aligned_cols=122 Identities=12% Similarity=0.009 Sum_probs=72.9
Q ss_pred CccCCCeE-EEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~l-~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
++|||+++ +++..+++|.|||+........- ......++..... ..-......|.++|..+.+...|..|..|+
T Consensus 265 vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~----~~~~~~~~~~~~~-~glgplh~~fd~~g~~yts~~~ds~v~kw~ 339 (441)
T d1qnia2 265 TSPDGKYFIANGKLSPTVSVIAIDKLDDLFED----KIELRDTIVAEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVCKWN 339 (441)
T ss_dssp ECTTSCEEEEECTTSSBEEEEEGGGHHHHTTT----SSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEEEE
T ss_pred ECCCCCEEEEeCCcCCcEEEEEeehhhhHhhc----cCCcceEEEeecc-cccCcccceecCCceEEEcccccceEEEec
Confidence 48999975 57789999999998653211000 0010111111111 223346678999988888888999999999
Q ss_pred ccCCC----C-CCceeeeeeeeeeecccccceeEEEEccCCCCEEEEE---eCCCcE
Q psy14817 80 ENPEA----G-DSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC---SDDGDV 128 (138)
Q Consensus 80 ~~~~~----~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~---~~d~~v 128 (138)
+.... + ......-+...+-..+|...+.+..++|+ +++|+++ +.|..+
T Consensus 340 ~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pd-Gk~l~s~~k~s~dr~~ 395 (441)
T d1qnia2 340 IADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDAD-GKWLVVLSKFSKDRFL 395 (441)
T ss_dssp HHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCC-CCEEEEEESCCGGGSC
T ss_pred cchhhhhhccCCCceeEeccccccCCCCCccccccccCCC-CcEEEecCccccccCc
Confidence 86221 0 11111111111112377777788889999 9999999 455443
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=98.08 E-value=0.0002 Score=44.43 Aligned_cols=122 Identities=13% Similarity=0.043 Sum_probs=68.9
Q ss_pred CccCCCeE-EEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEec-------------CCCccCeEEEEEecCCCeE
Q psy14817 1 MIQTGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-------------GHHGRTIYDISWCHLTDLI 66 (138)
Q Consensus 1 ~s~~~~~l-~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~v~~v~~~~~~~~~ 66 (138)
|+|+++++ ++.-.+++|.+|++...... ......... ..+......+.++|+|+++
T Consensus 200 f~pdg~~~yv~~e~~~~V~v~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l 269 (365)
T d1jofa_ 200 MHPTGNYLYALMEAGNRICEYVIDPATHM----------PVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYM 269 (365)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTTCC----------EEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEE
T ss_pred ECCCCceEEEeccCCCEEEEEEecCCCce----------EEEEeeeeccccccccccccccccccCCccceEECCCCCEE
Confidence 57899876 45556889999997543221 011111111 0022345678999999977
Q ss_pred EEeeC-CC-----cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEE-eCCCcEEEEEcCCC
Q psy14817 67 ATACG-DD-----AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC-SDDGDVKLWQIKLE 136 (138)
Q Consensus 67 ~s~~~-d~-----~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~d~~v~~wd~~~~ 136 (138)
+++.+ +. .|..|++.... .......... ..........++++|..+++|+.+ ..++.|.+|+++..
T Consensus 270 yvsnr~~~~~~~~~i~~~~~~~~g---~~~~~~~~~~-~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~ 342 (365)
T d1jofa_ 270 FASSRANKFELQGYIAGFKLRDCG---SIEKQLFLSP-TPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEEEESSTTSCCEEEEEEECTTS---CEEEEEEEEE-CSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred EEEcccCCCccceEEEEEEecCCC---ceeeEeEeeE-EEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCC
Confidence 66542 22 37777666432 1111111111 112334567899998437877665 46789999987643
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.00 E-value=0.00019 Score=42.29 Aligned_cols=106 Identities=9% Similarity=-0.037 Sum_probs=69.6
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
.++|+++++...++.|..++..... ...+..........|++.+++.++++-...+.|..++..
T Consensus 148 ~~~g~~~v~~~~~~~i~~~d~~~~~----------------~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~ 211 (260)
T d1rwia_ 148 DNSGNVYVTDTDNNRVVKLEAESNN----------------QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAG 211 (260)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTTCC----------------EEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTT
T ss_pred cCCCCEeeeccccccccccccccce----------------eeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCC
Confidence 4678888888888888888853321 112221134567889999999888888778888887765
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 134 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~ 134 (138)
... ........-.....|++.++ +.++++-..++.|+.++..
T Consensus 212 ~~~----------~~~~~~~~~~~P~~i~~d~~-g~l~vad~~~~rI~~i~~~ 253 (260)
T d1rwia_ 212 STT----------STVLPFTGLNTPLAVAVDSD-RTVYVADRGNDRVVKLTSL 253 (260)
T ss_dssp CSC----------CEECCCCSCCCEEEEEECTT-CCEEEEEGGGTEEEEECCC
T ss_pred CCe----------EEEEccCCCCCeEEEEEeCC-CCEEEEECCCCEEEEEeCC
Confidence 432 11111122245688999998 8888776777777766543
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=97.98 E-value=0.00044 Score=42.85 Aligned_cols=110 Identities=9% Similarity=-0.000 Sum_probs=62.5
Q ss_pred CccCCCeEEEeeC-CCcEEEeeccCCCCCCCccCCCCCCceEEeEEec-CCCccCeEEEEEecCCCeEE-EeeCCCcEEE
Q psy14817 1 MIQTGSRLATCSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHGRTIYDISWCHLTDLIA-TACGDDAIRI 77 (138)
Q Consensus 1 ~s~~~~~l~t~s~-d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~v~~~~~~~~~~-s~~~d~~i~i 77 (138)
|+|+|++++++.. ...|.+|+...... ........ .........+.|+|+++++. +.-.+++|.+
T Consensus 152 ~sPdG~~l~v~d~g~d~v~~~~~~~~g~------------~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v 219 (365)
T d1jofa_ 152 FDPTETYLYSADLTANKLWTHRKLASGE------------VELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICE 219 (365)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTSC------------EEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred ECCCCCEEEEeeCCCCEEEEEEccCCCc------------eeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEE
Confidence 6899998777754 45778887543221 01111111 11345678999999999664 4456788999
Q ss_pred EeccCCCCCCceeeeeeeee---------eecccccceeEEEEccCCCCEEEEEe
Q psy14817 78 FKENPEAGDSDMVSFDLVHT---------EHRAHNQDVNCVAWNPVVPGMLASCS 123 (138)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~v~~~~~~~~~~~~l~~~~ 123 (138)
|++................. ...........+.++|+ +++|+++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spd-G~~lyvsn 273 (365)
T d1jofa_ 220 YVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFS-GKYMFASS 273 (365)
T ss_dssp EEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTT-SSEEEEEE
T ss_pred EEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCC-CCEEEEEc
Confidence 99876541111111110000 00112234567889999 88887664
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.74 E-value=0.00049 Score=40.48 Aligned_cols=106 Identities=9% Similarity=0.013 Sum_probs=63.4
Q ss_pred ccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEecc
Q psy14817 2 IQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 81 (138)
Q Consensus 2 s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~ 81 (138)
+++|+++++....+.+++++.... ..+.... ......++++.+++.++++-..+..+..++..
T Consensus 65 ~~~g~i~v~d~~~~~i~~~~~~~~---------------~~~~~~~--~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~ 127 (260)
T d1rwia_ 65 DGAGTVYVTDFNNRVVTLAAGSNN---------------QTVLPFD--GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAG 127 (260)
T ss_dssp CTTCCEEEEETTTEEEEECTTCSC---------------CEECCCC--SCCSEEEEEECTTCCEEEEEGGGTEEEEECTT
T ss_pred cCCCCEEEeeeeeceeeeeeeccc---------------eeeeeee--eeeecccccccccceeEeeccccccccccccc
Confidence 467777777776666666553211 1122222 23457889999998877766556667766654
Q ss_pred CCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCC
Q psy14817 82 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 135 (138)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 135 (138)
... ..............+++.++ ++++++...++.|..++...
T Consensus 128 ~~~----------~~~~~~~~~~~p~~i~~~~~-g~~~v~~~~~~~i~~~d~~~ 170 (260)
T d1rwia_ 128 SKT----------QTVLPFTGLNDPDGVAVDNS-GNVYVTDTDNNRVVKLEAES 170 (260)
T ss_dssp CSS----------CEECCCCSCCSCCEEEECTT-CCEEEEEGGGTEEEEECTTT
T ss_pred cce----------eeeeeecccCCcceeeecCC-CCEeeecccccccccccccc
Confidence 432 11111112234567888887 77777777777788887654
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.74 E-value=0.0011 Score=39.44 Aligned_cols=106 Identities=9% Similarity=0.103 Sum_probs=66.9
Q ss_pred cCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCC-CccCeEEEEEecCCCeEEEee-CCCcEEEEec
Q psy14817 3 QTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGRTIYDISWCHLTDLIATAC-GDDAIRIFKE 80 (138)
Q Consensus 3 ~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~s~~-~d~~i~i~~~ 80 (138)
++++.+++....+.|.+|+... +.+..+... .......|++.++|..+++-. .++.|.+|+.
T Consensus 166 ~~g~i~v~d~~~~~V~~~d~~G----------------~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~ 229 (279)
T d1q7fa_ 166 DKQEIFISDNRAHCVKVFNYEG----------------QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ 229 (279)
T ss_dssp SSSEEEEEEGGGTEEEEEETTC----------------CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT
T ss_pred cceeEEeeeccccceeeeecCC----------------ceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECC
Confidence 5667777777778888887421 223333210 334578999999999777644 3456999875
Q ss_pred cCCCCCCceeeeeeeeeee-cccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 81 NPEAGDSDMVSFDLVHTEH-RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
. ++ ....+. .......+.+++.|+ +.+++ ++.+..|++|...+.
T Consensus 230 ~-G~---------~~~~~~~~~~~~~p~~vav~~d-G~l~V-~~~n~~v~~fr~~~~ 274 (279)
T d1q7fa_ 230 D-GQ---------LISALESKVKHAQCFDVALMDD-GSVVL-ASKDYRLYIYRYVQL 274 (279)
T ss_dssp T-SC---------EEEEEEESSCCSCEEEEEEETT-TEEEE-EETTTEEEEEECSCC
T ss_pred C-CC---------EEEEEeCCCCCCCEeEEEEeCC-CcEEE-EeCCCeEEEEEeeee
Confidence 4 22 111111 122235788999998 76554 567899999987654
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=97.69 E-value=0.001 Score=39.90 Aligned_cols=80 Identities=9% Similarity=0.077 Sum_probs=58.9
Q ss_pred eEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEE
Q psy14817 40 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGML 119 (138)
Q Consensus 40 ~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 119 (138)
.+.+..+.. ...+..+++.|+|.++++...+++|..++..... .........+..+++.++ ++++
T Consensus 18 ~~v~~~~p~--~~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~~------------~~~~~~~~~~~gla~~~d-G~l~ 82 (302)
T d2p4oa1 18 AKIITSFPV--NTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ------------QIHATVEGKVSGLAFTSN-GDLV 82 (302)
T ss_dssp EEEEEEECT--TCCEEEEEECTTSCEEEEETTTTEEEEECTTCCE------------EEEEECSSEEEEEEECTT-SCEE
T ss_pred ccEEEECCC--CCCcCCEEECCCCCEEEEeCCCCEEEEEeCCCCE------------EEEEcCCCCcceEEEcCC-CCeE
Confidence 355566654 3368899999999999998889988888755321 111234567899999999 9988
Q ss_pred EEEeCCCcEEEEEcC
Q psy14817 120 ASCSDDGDVKLWQIK 134 (138)
Q Consensus 120 ~~~~~d~~v~~wd~~ 134 (138)
++...++.+..++..
T Consensus 83 v~~~~~~~~~~~~~~ 97 (302)
T d2p4oa1 83 ATGWNADSIPVVSLV 97 (302)
T ss_dssp EEEECTTSCEEEEEE
T ss_pred EEecCCceEEEEEec
Confidence 888888888877654
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=97.61 E-value=0.00088 Score=42.68 Aligned_cols=97 Identities=7% Similarity=-0.059 Sum_probs=59.2
Q ss_pred ccCCCeE-EEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCC--eEEEeeCCCcEE--
Q psy14817 2 IQTGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD--LIATACGDDAIR-- 76 (138)
Q Consensus 2 s~~~~~l-~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~--~~~s~~~d~~i~-- 76 (138)
+|||+++ ++...+..|.++|+... ++...+.-.....+..++++|+++ +++..+.+ .+.
T Consensus 80 tpDGr~lfV~d~~~~rVavIDl~t~---------------k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~-~v~~~ 143 (441)
T d1qnia2 80 RYDGKYLFINDKANTRVARIRLDIM---------------KTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEF-VIPQP 143 (441)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTT---------------EEEEEEECTTCCCEEEEEECCSSBCCEEEEEECS-CEESS
T ss_pred cCCCCEEEEEcCCCCEEEEEECCCC---------------cEeeEEecCCCCCccceEEeccCCEEEEEeccCC-ccccc
Confidence 5789877 45567889999997544 333433322456789999999997 44444433 332
Q ss_pred ----------------EEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCC
Q psy14817 77 ----------------IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG 126 (138)
Q Consensus 77 ----------------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 126 (138)
.+|..... ..... .-......+.++|+ +.++++.+.+.
T Consensus 144 ~dg~~~~~~~~~~~~~~iD~~t~~---------v~~qI--~v~~~p~~v~~spd-Gk~a~vt~~ns 197 (441)
T d1qnia2 144 NDGTDFSLDNSYTMFTAIDAETMD---------VAWQV--IVDGNLDNTDADYT-GKYATSTCYNS 197 (441)
T ss_dssp CSSSCCCGGGEEEEEEEEETTTCS---------EEEEE--EESSCCCCEEECSS-SSEEEEEESCT
T ss_pred CcccccccccccceEEeecCccce---------eeEEE--ecCCCccceEECCC-CCEEEEEecCC
Confidence 23333322 11111 11235678999999 88888777553
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.61 E-value=0.00036 Score=44.78 Aligned_cols=114 Identities=9% Similarity=-0.060 Sum_probs=60.2
Q ss_pred CccCCCeEEEee---------CCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeC
Q psy14817 1 MIQTGSRLATCS---------DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 71 (138)
Q Consensus 1 ~s~~~~~l~t~s---------~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~ 71 (138)
||||+++++... ..+.+.++|+..... +.+..... ....+....|+|+|..++=..
T Consensus 68 ~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~-------------~~l~~~~~-~~~~l~~~~wSPDG~~iafv~- 132 (465)
T d1xfda1 68 ISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-------------QSLDPPEV-SNAKLQYAGWGPKGQQLIFIF- 132 (465)
T ss_dssp ECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-------------EECCCTTC-CSCCCSBCCBCSSTTCEEEEE-
T ss_pred ECCCCCeEEEEEcccceeEeeccccEEEEEccCCce-------------eeccCccC-CccccceeeeccCCceEEEEe-
Confidence 589999877653 345667777654322 22222222 234555688999999766554
Q ss_pred CCcEEEEeccCCCCCCceeeeeee-eeeeccc---------ccceeEEEEccCCCCEEEEEeC-CCcEEEEE
Q psy14817 72 DDAIRIFKENPEAGDSDMVSFDLV-HTEHRAH---------NQDVNCVAWNPVVPGMLASCSD-DGDVKLWQ 132 (138)
Q Consensus 72 d~~i~i~~~~~~~~~~~~~~~~~~-~~~~~~~---------~~~v~~~~~~~~~~~~l~~~~~-d~~v~~wd 132 (138)
++.|.+.+...+... +....-. .....+. ...-..+-|+|+ +..|+.... +..+..+.
T Consensus 133 ~~nl~~~~~~~~~~~--~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPD-gk~iaf~~~D~s~V~~~~ 201 (465)
T d1xfda1 133 ENNIYYCAHVGKQAI--RVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPD-GTRLAYAAINDSRVPIME 201 (465)
T ss_dssp TTEEEEESSSSSCCE--EEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTT-SSEEEEEEEECTTSCEEE
T ss_pred cceEEEEecCCCceE--EEecccCcceeeccccchhhhhhhccccceEEECCC-CCeEEEEEecccccceee
Confidence 456777776654300 0000000 0000000 011246789999 888877653 34454443
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.54 E-value=0.001 Score=38.87 Aligned_cols=87 Identities=13% Similarity=0.105 Sum_probs=50.4
Q ss_pred CccCCCeEEEeeCC-CcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEE-eeCC--CcEE
Q psy14817 1 MIQTGSRLATCSDD-ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT-ACGD--DAIR 76 (138)
Q Consensus 1 ~s~~~~~l~t~s~d-~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s-~~~d--~~i~ 76 (138)
++|+++.++..+.+ +...+|....... . . .... .........|+|+|+.|+- .... ..|.
T Consensus 178 ~spdg~~~~~~~~~~~~~~i~~~~~~~~-------------~-~-~~~~-~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~ 241 (269)
T d2hqsa1 178 VSSDGKFMVMVSSNGGQQHIAKQDLATG-------------G-V-QVLS-STFLDETPSLAPNGTMVIYSSSQGMGSVLN 241 (269)
T ss_dssp ECTTSSEEEEEEECSSCEEEEEEETTTC-------------C-E-EECC-CSSSCEEEEECTTSSEEEEEEEETTEEEEE
T ss_pred cccccceeEEEeecCCceeeeEeecccc-------------c-c-eEee-cCccccceEECCCCCEEEEEEcCCCCcEEE
Confidence 47888877766544 4555555432221 0 1 1222 3445677899999996543 3322 3578
Q ss_pred EEeccCCCCCCceeeeeeeeeeecccccceeEEEEccC
Q psy14817 77 IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV 114 (138)
Q Consensus 77 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 114 (138)
++++..+. ...+ ......+...+|+|-
T Consensus 242 ~~~~dg~~----------~~~l-t~~~g~~~~p~WSP~ 268 (269)
T d2hqsa1 242 LVSTDGRF----------KARL-PATDGQVKFPAWSPY 268 (269)
T ss_dssp EEETTSCC----------EEEC-CCSSSEEEEEEECCC
T ss_pred EEECCCCC----------EEEE-eCCCCcEEeEEeCCC
Confidence 88887654 2222 244556778889883
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.52 E-value=0.00057 Score=43.82 Aligned_cols=110 Identities=8% Similarity=0.024 Sum_probs=66.1
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEee---------C
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC---------G 71 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~---------~ 71 (138)
|.+++.++. -..+|.|.+|++..... +.+.....-....+....++||+++++... .
T Consensus 24 W~~~~~~~~-~~~~g~i~~~~~~~~~~-------------~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~ 89 (465)
T d1xfda1 24 WISDTEFIY-REQKGTVRLWNVETNTS-------------TVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSY 89 (465)
T ss_dssp BSSSSCBCC-CCSSSCEEEBCGGGCCC-------------EEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCC
T ss_pred EeCCCcEEE-EeCCCcEEEEECCCCCE-------------EEEEcCccccccccceeEECCCCCeEEEEEcccceeEeec
Confidence 345555544 34678899999865433 222222111223566788999999766543 3
Q ss_pred CCcEEEEeccCCCCCCceeeeeeeeeee--cccccceeEEEEccCCCCEEEEEeCCCcEEEEEcCCC
Q psy14817 72 DDAIRIFKENPEAGDSDMVSFDLVHTEH--RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 72 d~~i~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.+.+.++|+..+. ...+. ......+....|+|+ +..++... ++.|.+.+..++
T Consensus 90 ~~~~~i~d~~~~~----------~~~l~~~~~~~~~l~~~~wSPD-G~~iafv~-~~nl~~~~~~~~ 144 (465)
T d1xfda1 90 TGYYVLSKIPHGD----------PQSLDPPEVSNAKLQYAGWGPK-GQQLIFIF-ENNIYYCAHVGK 144 (465)
T ss_dssp CSEEEEEESSSCC----------CEECCCTTCCSCCCSBCCBCSS-TTCEEEEE-TTEEEEESSSSS
T ss_pred cccEEEEEccCCc----------eeeccCccCCccccceeeeccC-CceEEEEe-cceEEEEecCCC
Confidence 4568888988765 21111 122345667889999 88887765 556777665443
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.32 E-value=0.0034 Score=36.62 Aligned_cols=98 Identities=7% Similarity=0.050 Sum_probs=53.4
Q ss_pred ccC--CCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEe-eCCC-----
Q psy14817 2 IQT--GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA-CGDD----- 73 (138)
Q Consensus 2 s~~--~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~-~~d~----- 73 (138)
||+ |+.+|-.+. +.|.+.|+.... ...+.. +.+.+...+|+|||+.|+-. ..++
T Consensus 7 sPdi~G~~v~f~~~-~dl~~~d~~~g~----------------~~~Lt~-~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~ 68 (281)
T d1k32a2 7 NPDIHGDRIIFVCC-DDLWEHDLKSGS----------------TRKIVS-NLGVINNARFFPDGRKIAIRVMRGSSLNTA 68 (281)
T ss_dssp EEEEETTEEEEEET-TEEEEEETTTCC----------------EEEEEC-SSSEEEEEEECTTSSEEEEEEEESTTCCEE
T ss_pred CCCCCCCEEEEEeC-CcEEEEECCCCC----------------EEEEec-CCCcccCEEECCCCCEEEEEEeeCCCCCce
Confidence 788 988875543 556666764321 223444 45678889999999966543 2222
Q ss_pred cEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEE
Q psy14817 74 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC 122 (138)
Q Consensus 74 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 122 (138)
.|.+++...+. ......................|+|+ ++.++..
T Consensus 69 ~i~~~~~~~g~----~~~lt~~~~~~~~~~~~~~~~~~spd-g~~l~~~ 112 (281)
T d1k32a2 69 DLYFYNGENGE----IKRITYFSGKSTGRRMFTDVAGFDPD-GNLIIST 112 (281)
T ss_dssp EEEEEETTTTE----EEECCCCCEEEETTEECSEEEEECTT-CCEEEEE
T ss_pred EEEEEEecCCc----eEEeeecCCCccCccccccccccCCC-CCEEEEE
Confidence 25555554443 00000000000112234567789998 8877654
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=96.94 E-value=0.011 Score=34.19 Aligned_cols=77 Identities=12% Similarity=0.007 Sum_probs=46.3
Q ss_pred CccCeEEEEEecCCCeEEEeeC-CCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC---C
Q psy14817 50 HGRTIYDISWCHLTDLIATACG-DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD---D 125 (138)
Q Consensus 50 ~~~~v~~v~~~~~~~~~~s~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---d 125 (138)
.........|+|++..++..+. .+...+|....... .... ...........|+|+ ++.|+..+. .
T Consensus 169 ~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~---------~~~~-~~~~~~~~~p~~SPD-G~~i~f~s~~~~~ 237 (269)
T d2hqsa1 169 EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG---------GVQV-LSSTFLDETPSLAPN-GTMVIYSSSQGMG 237 (269)
T ss_dssp SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTC---------CEEE-CCCSSSCEEEEECTT-SSEEEEEEEETTE
T ss_pred ccccccccccccccceeEEEeecCCceeeeEeecccc---------cceE-eecCccccceEECCC-CCEEEEEEcCCCC
Confidence 3456677889999996665544 44455554443320 1111 133445667889999 887765443 3
Q ss_pred CcEEEEEcCCCC
Q psy14817 126 GDVKLWQIKLEN 137 (138)
Q Consensus 126 ~~v~~wd~~~~~ 137 (138)
..|.++++..+.
T Consensus 238 ~~l~~~~~dg~~ 249 (269)
T d2hqsa1 238 SVLNLVSTDGRF 249 (269)
T ss_dssp EEEEEEETTSCC
T ss_pred cEEEEEECCCCC
Confidence 457788887653
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=96.84 E-value=0.017 Score=34.79 Aligned_cols=79 Identities=5% Similarity=-0.016 Sum_probs=50.8
Q ss_pred CeEEEEEecCCCe-EEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEE
Q psy14817 53 TIYDISWCHLTDL-IATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 131 (138)
Q Consensus 53 ~v~~v~~~~~~~~-~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~w 131 (138)
..+.++|+|++.. +++-+..+.|..|++...... .......... ........-.|++..+ +++.++....+.|.++
T Consensus 178 ~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~-~~~~~~~~~~-~~~~~~~PdGl~vD~~-G~l~Va~~~~g~V~~~ 254 (319)
T d2dg1a1 178 VANGIALSTDEKVLWVTETTANRLHRIALEDDGVT-IQPFGATIPY-YFTGHEGPDSCCIDSD-DNLYVAMYGQGRVLVF 254 (319)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSS-EEEEEEEEEE-ECCSSSEEEEEEEBTT-CCEEEEEETTTEEEEE
T ss_pred eeeeeeeccccceEEEecccCCceEEEEEcCCCce-eccccceeee-ccCCccceeeeeEcCC-CCEEEEEcCCCEEEEE
Confidence 4578999999984 455566788999988754311 1111111111 1122233567888888 8888888888999999
Q ss_pred EcC
Q psy14817 132 QIK 134 (138)
Q Consensus 132 d~~ 134 (138)
|..
T Consensus 255 ~p~ 257 (319)
T d2dg1a1 255 NKR 257 (319)
T ss_dssp CTT
T ss_pred CCC
Confidence 864
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.82 E-value=0.016 Score=34.14 Aligned_cols=73 Identities=7% Similarity=0.050 Sum_probs=49.8
Q ss_pred CccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeee-cccccceeEEEEccCCCCEEEEEeC-CCc
Q psy14817 50 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH-RAHNQDVNCVAWNPVVPGMLASCSD-DGD 127 (138)
Q Consensus 50 ~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~-d~~ 127 (138)
+......+++.+++..+++....+.|++|+..... ..... .+.......+++.++ ++++++-.. +..
T Consensus 155 ~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~G~~----------~~~~g~~g~~~~P~giavD~~-G~i~Vad~~~~~~ 223 (279)
T d1q7fa_ 155 HLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQY----------LRQIGGEGITNYPIGVGINSN-GEILIADNHNNFN 223 (279)
T ss_dssp TCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCE----------EEEESCTTTSCSEEEEEECTT-CCEEEEECSSSCE
T ss_pred cccccceeeeccceeEEeeeccccceeeeecCCce----------eeeecccccccCCcccccccC-CeEEEEECCCCcE
Confidence 45677889999998888888888899999875321 11111 133446788899888 887766544 345
Q ss_pred EEEEEc
Q psy14817 128 VKLWQI 133 (138)
Q Consensus 128 v~~wd~ 133 (138)
|.+++.
T Consensus 224 v~~f~~ 229 (279)
T d1q7fa_ 224 LTIFTQ 229 (279)
T ss_dssp EEEECT
T ss_pred EEEECC
Confidence 887764
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=96.58 E-value=0.031 Score=34.18 Aligned_cols=73 Identities=7% Similarity=0.009 Sum_probs=44.8
Q ss_pred eEEEEEecCCCeEEEeeCC-CcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCC------C
Q psy14817 54 IYDISWCHLTDLIATACGD-DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD------G 126 (138)
Q Consensus 54 v~~v~~~~~~~~~~s~~~d-~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------~ 126 (138)
.....+.+++.+++.|+.+ ..+.+||..... +... ... .....-......++ +.+++.++.+ .
T Consensus 78 ~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~-------w~~~-~~~-~~~r~~~~~~~~~d-G~v~v~GG~~~~~~~~~ 147 (387)
T d1k3ia3 78 CPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS-------WIPG-PDM-QVARGYQSSATMSD-GRVFTIGGSWSGGVFEK 147 (387)
T ss_dssp SCEEEECTTSCEEEECSSSTTCEEEEEGGGTE-------EEEC-CCC-SSCCSSCEEEECTT-SCEEEECCCCCSSSCCC
T ss_pred eeEEEEecCCcEEEeecCCCcceeEecCccCc-------cccc-ccc-cccccccceeeecC-Cceeeeccccccccccc
Confidence 3456778899988888655 479999988654 1111 111 11122234555667 8888887643 3
Q ss_pred cEEEEEcCCC
Q psy14817 127 DVKLWQIKLE 136 (138)
Q Consensus 127 ~v~~wd~~~~ 136 (138)
.+.+||..+.
T Consensus 148 ~v~~yd~~~~ 157 (387)
T d1k3ia3 148 NGEVYSPSSK 157 (387)
T ss_dssp CEEEEETTTT
T ss_pred eeeeecCCCC
Confidence 5888887664
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=96.40 E-value=0.038 Score=33.25 Aligned_cols=109 Identities=9% Similarity=0.008 Sum_probs=61.4
Q ss_pred CccCCCe-EEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGSR-LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~~-l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+|+++. +++-+..+.|..|++........ ........... .......+++.++|.+.++....+.|.+++
T Consensus 184 ~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~-------~~~~~~~~~~~-~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~ 255 (319)
T d2dg1a1 184 LSTDEKVLWVTETTANRLHRIALEDDGVTIQ-------PFGATIPYYFT-GHEGPDSCCIDSDDNLYVAMYGQGRVLVFN 255 (319)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEEECTTSSSEE-------EEEEEEEEECC-SSSEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred eccccceEEEecccCCceEEEEEcCCCceec-------cccceeeeccC-CccceeeeeEcCCCCEEEEEcCCCEEEEEC
Confidence 5788874 46667788999998754322100 00011111111 123356899999999888888889999998
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 123 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 123 (138)
.. ++ .......... ...+...+++++|.+. ...++...
T Consensus 256 p~-G~---~l~~i~~P~~-~~~~~~~~~~~~~~~~-~~~~~~t~ 293 (319)
T d2dg1a1 256 KR-GY---PIGQILIPGR-DEGHMLRSTHPQFIPG-TNQLIICS 293 (319)
T ss_dssp TT-SC---EEEEEECTTG-GGTCSCBCCEEEECTT-SCEEEEEE
T ss_pred CC-Cc---EEEEEeCCCc-CCCcCceeeeEEEeCC-CCEEEEEc
Confidence 64 33 0001111100 0123346788999887 55554443
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=96.27 E-value=0.046 Score=32.85 Aligned_cols=81 Identities=10% Similarity=0.112 Sum_probs=49.4
Q ss_pred CeEEEEEecCCC-----eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCc
Q psy14817 53 TIYDISWCHLTD-----LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGD 127 (138)
Q Consensus 53 ~v~~v~~~~~~~-----~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 127 (138)
..+.++|++++. ++++-+..+.|..|++.... ...................-.+++..+ ++++++....+.
T Consensus 173 ~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g---~~~~~~~~~~~~~~~~~~pdGiavD~~-GnlyVa~~~~g~ 248 (314)
T d1pjxa_ 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPA---KIENKKVWGHIPGTHEGGADGMDFDED-NNLLVANWGSSH 248 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETT---EEEEEEEEEECCCCSSCEEEEEEEBTT-CCEEEEEETTTE
T ss_pred eeeeeEECCCCCcceeEEEEEeecccceEEeeccCcc---ccceeeEEEEccccccccceeeEEecC-CcEEEEEcCCCE
Confidence 346788988764 44555667788888876432 111111111111112234567888888 888888777888
Q ss_pred EEEEEcCCCC
Q psy14817 128 VKLWQIKLEN 137 (138)
Q Consensus 128 v~~wd~~~~~ 137 (138)
|.+||...++
T Consensus 249 I~~~dp~~g~ 258 (314)
T d1pjxa_ 249 IEVFGPDGGQ 258 (314)
T ss_dssp EEEECTTCBS
T ss_pred EEEEeCCCCE
Confidence 9999877654
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.10 E-value=0.029 Score=32.43 Aligned_cols=66 Identities=12% Similarity=0.013 Sum_probs=41.3
Q ss_pred EEecC--CCeEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeC-CC-----cEE
Q psy14817 58 SWCHL--TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD-DG-----DVK 129 (138)
Q Consensus 58 ~~~~~--~~~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~-----~v~ 129 (138)
..+|+ |..++-.+ ++.|.+.++..+. ...+ ..+.......+|+|+ ++.|+.... ++ .|.
T Consensus 5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~----------~~~L-t~~~~~~~~p~~SPD-G~~iaf~~~~~~~~~~~~i~ 71 (281)
T d1k32a2 5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGS----------TRKI-VSNLGVINNARFFPD-GRKIAIRVMRGSSLNTADLY 71 (281)
T ss_dssp CEEEEEETTEEEEEE-TTEEEEEETTTCC----------EEEE-ECSSSEEEEEEECTT-SSEEEEEEEESTTCCEEEEE
T ss_pred ccCCCCCCCEEEEEe-CCcEEEEECCCCC----------EEEE-ecCCCcccCEEECCC-CCEEEEEEeeCCCCCceEEE
Confidence 35677 87555443 4568888888765 3322 345567788999999 888875532 22 355
Q ss_pred EEEcCCC
Q psy14817 130 LWQIKLE 136 (138)
Q Consensus 130 ~wd~~~~ 136 (138)
+.+..++
T Consensus 72 ~~~~~~g 78 (281)
T d1k32a2 72 FYNGENG 78 (281)
T ss_dssp EEETTTT
T ss_pred EEEecCC
Confidence 5555443
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.54 E-value=0.37 Score=28.49 Aligned_cols=103 Identities=8% Similarity=0.040 Sum_probs=59.6
Q ss_pred CccCCC-eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEe
Q psy14817 1 MIQTGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 79 (138)
Q Consensus 1 ~s~~~~-~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~ 79 (138)
|+++++ ++++-+..+.|..+++....... ...........+ .......+++..+|.+.++.-..+.|..|+
T Consensus 155 ~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~-------~~~~~~~~~~~~-~~g~pdG~~vD~~GnlWva~~~~g~V~~~d 226 (295)
T d2ghsa1 155 FSPDGTTGYFVDTKVNRLMRVPLDARTGLP-------TGKAEVFIDSTG-IKGGMDGSVCDAEGHIWNARWGEGAVDRYD 226 (295)
T ss_dssp ECTTSCEEEEEETTTCEEEEEEBCTTTCCB-------SSCCEEEEECTT-SSSEEEEEEECTTSCEEEEEETTTEEEEEC
T ss_pred ecCCCceEEEeecccceeeEeeeccccccc-------ccceEEEeccCc-ccccccceEEcCCCCEEeeeeCCCceEEec
Confidence 466776 45566677888888764322110 011122233333 345678899999999888777778899998
Q ss_pred ccCCCCCCceeeeeeeeeeecccccceeEEEEc-cCCCCEE-EEEe
Q psy14817 80 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN-PVVPGML-ASCS 123 (138)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l-~~~~ 123 (138)
.. ++ ...... -....+++++|- ++ .+.| ++..
T Consensus 227 p~-G~---------~~~~i~-lP~~~~T~~~FGG~d-~~~LyvTta 260 (295)
T d2ghsa1 227 TD-GN---------HIARYE-VPGKQTTCPAFIGPD-ASRLLVTSA 260 (295)
T ss_dssp TT-CC---------EEEEEE-CSCSBEEEEEEESTT-SCEEEEEEB
T ss_pred CC-Cc---------EeeEec-CCCCceEEEEEeCCC-CCEEEEEEC
Confidence 65 33 122221 223468889995 45 4544 4433
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=89.52 E-value=1.6 Score=27.70 Aligned_cols=80 Identities=10% Similarity=-0.013 Sum_probs=48.4
Q ss_pred CeEEEEEecCCCeE-EEeeCCCcEEEEeccCCCCCC--ceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEE
Q psy14817 53 TIYDISWCHLTDLI-ATACGDDAIRIFKENPEAGDS--DMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 129 (138)
Q Consensus 53 ~v~~v~~~~~~~~~-~s~~~d~~i~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~ 129 (138)
..+.+..+|||+++ +++..+.++.|+|++...... ........... .........-+|... ++-..+---|.+|.
T Consensus 276 sPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e-~elglgPLht~fd~~-g~aytslfids~v~ 353 (459)
T d1fwxa2 276 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAE-PELGLGPLHTAFDGR-GNAYTSLFLDSQVV 353 (459)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEEC-CBCCSCEEEEEECTT-SEEEEEETTTTEEE
T ss_pred CCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEee-cccCcCccccccCCC-ceEEEEeeccceEE
Confidence 45678999999955 555578899999997432000 00000011111 122345566778776 76666666899999
Q ss_pred EEEcC
Q psy14817 130 LWQIK 134 (138)
Q Consensus 130 ~wd~~ 134 (138)
-|++.
T Consensus 354 kw~~~ 358 (459)
T d1fwxa2 354 KWNIE 358 (459)
T ss_dssp EEEHH
T ss_pred EEecc
Confidence 99974
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=87.64 E-value=1.6 Score=25.55 Aligned_cols=79 Identities=6% Similarity=-0.021 Sum_probs=48.8
Q ss_pred CeEEEEEecCCC-eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEE
Q psy14817 53 TIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 131 (138)
Q Consensus 53 ~v~~v~~~~~~~-~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~w 131 (138)
..+.+.|++++. ++++-+..+.|..+++............ ..............+++..+ +++.++.-..+.|..|
T Consensus 149 ~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~--~~~~~~~~~g~pdG~~vD~~-GnlWva~~~~g~V~~~ 225 (295)
T d2ghsa1 149 IPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAE--VFIDSTGIKGGMDGSVCDAE-GHIWNARWGEGAVDRY 225 (295)
T ss_dssp SEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCE--EEEECTTSSSEEEEEEECTT-SCEEEEEETTTEEEEE
T ss_pred CcceeeecCCCceEEEeecccceeeEeeecccccccccceE--EEeccCcccccccceEEcCC-CCEEeeeeCCCceEEe
Confidence 457899999998 4556666778998888644311111111 11111233445677788777 7777776667778888
Q ss_pred EcC
Q psy14817 132 QIK 134 (138)
Q Consensus 132 d~~ 134 (138)
|..
T Consensus 226 dp~ 228 (295)
T d2ghsa1 226 DTD 228 (295)
T ss_dssp CTT
T ss_pred cCC
Confidence 854
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=86.35 E-value=2.2 Score=25.70 Aligned_cols=108 Identities=12% Similarity=0.098 Sum_probs=61.5
Q ss_pred CccCCCeEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEec
Q psy14817 1 MIQTGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 80 (138)
Q Consensus 1 ~s~~~~~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~ 80 (138)
|+|..+.||--+ ..++.|||++.. +.++.+.- ..+|....|-.+.. |+-. .+..|+-|++
T Consensus 70 MhP~~~IiALra-g~~LQiFnletK---------------~klks~~~--~e~VvfWkWis~~~-L~lV-T~taVYHW~~ 129 (327)
T d1utca2 70 MNPASKVIALKA-GKTLQIFNIEMK---------------SKMKAHTM--TDDVTFWKWISLNT-VALV-TDNAVYHWSM 129 (327)
T ss_dssp ECSSSSEEEEEE-TTEEEEEETTTT---------------EEEEEEEC--SSCCCEEEESSSSE-EEEE-CSSEEEEEES
T ss_pred cCCCCcEEEEec-CCeEEEEehhHh---------------hhhceEEc--CCCcEEEEecCCCE-EEEE-cCCceEEEcc
Confidence 478888888766 568999997544 33555554 45787888875444 2222 2457999999
Q ss_pred cCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEe-------CCCcEEEEEcC
Q psy14817 81 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS-------DDGDVKLWQIK 134 (138)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-------~d~~v~~wd~~ 134 (138)
+... .+.. ...+...-....|..-+.+++ .++++..+ -.|.+.+|...
T Consensus 130 ~g~s----~P~k-~fdR~~~L~~~QIInY~~d~~-~kW~~l~GI~~~~~~i~G~mQLYS~e 184 (327)
T d1utca2 130 EGES----QPVK-MFDRHSSLAGCQIINYRTDAK-QKWLLLTGISAQQNRVVGAMQLYSVD 184 (327)
T ss_dssp SSSC----CCEE-EEECCGGGTTCEEEEEEECTT-SCEEEEEEEEEETTEEEEEEEEEETT
T ss_pred cCCC----Cchh-hhhhcccccCceEEEEEECCC-CCEEEEEeEecCCCceeEEEEEEEec
Confidence 6433 1111 111111112346666666777 77665433 13455565544
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=86.26 E-value=2.2 Score=25.58 Aligned_cols=88 Identities=8% Similarity=0.007 Sum_probs=48.3
Q ss_pred CceEEeEEecCCCccCeEEEEEecCCCeEEEeeCC-----C------cEEEEeccCCCCCCceeeeeeeeeeecccccce
Q psy14817 38 SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD-----D------AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDV 106 (138)
Q Consensus 38 ~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d-----~------~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (138)
..|.....+.. ..+.......+++.++-|+.+ + .+.+||..... ... .......+....
T Consensus 9 g~W~~~~~~p~---~~~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~-w~~------~~~~~~~~~~~~ 78 (387)
T d1k3ia3 9 GRWGPTIDLPI---VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI-VSD------RTVTVTKHDMFC 78 (387)
T ss_dssp CEEEEEEECSS---CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC-BCC------CEEEECSCCCSS
T ss_pred CccCCcCCCCc---cccEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCc-Eee------cCCCCCCcccce
Confidence 34555444322 234444445677766666532 1 36789888654 000 111111222333
Q ss_pred eEEEEccCCCCEEEEEeCC-CcEEEEEcCCC
Q psy14817 107 NCVAWNPVVPGMLASCSDD-GDVKLWQIKLE 136 (138)
Q Consensus 107 ~~~~~~~~~~~~l~~~~~d-~~v~~wd~~~~ 136 (138)
....+.++ +.+++.|+.+ ..+.+||..+.
T Consensus 79 ~~~~~~~~-g~i~v~Gg~~~~~~~~yd~~~~ 108 (387)
T d1k3ia3 79 PGISMDGN-GQIVVTGGNDAKKTSLYDSSSD 108 (387)
T ss_dssp CEEEECTT-SCEEEECSSSTTCEEEEEGGGT
T ss_pred eEEEEecC-CcEEEeecCCCcceeEecCccC
Confidence 45667788 8888888765 57899987654
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=83.95 E-value=3.1 Score=25.38 Aligned_cols=116 Identities=14% Similarity=0.117 Sum_probs=65.9
Q ss_pred eEEEeeCCCcEEEeeccCCCCCCCccCCCCCCceEEeEEecCCCccCeEEEEEecCCCeEEEeeCCCcEEEEeccCCCCC
Q psy14817 7 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 86 (138)
Q Consensus 7 ~l~t~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~d~~i~i~~~~~~~~~ 86 (138)
+++....+|.+..|.+...... ....+.+..+.. ...+-.+.+......|+.+-.+.-++.++.......
T Consensus 145 ~afv~~k~G~v~q~~l~~~~~g--------~v~~~lvr~f~~--~~q~EGCVvDde~~~LyisEE~~Giw~~~a~~~~~~ 214 (353)
T d1h6la_ 145 YAMVTGKEGEFEQYELNADKNG--------YISGKKVRAFKM--NSQTEGMAADDEYGSLYIAEEDEAIWKFSAEPDGGS 214 (353)
T ss_dssp EEEEECSSSEEEEEEEEECTTS--------SEEEEEEEEEEC--SSCEEEEEEETTTTEEEEEETTTEEEEEESSTTSCS
T ss_pred EEEEEcCCceEEEEEEEcCCCC--------ceeeEeeeccCC--CCccceEEEeCCCCcEEEecCccceEEEEeccCCCc
Confidence 4566677888888887433210 122345566654 457888999998888888877766666655433211
Q ss_pred Cceeeeeeeeeee-cccccceeEEEEc--cC-CCCEEEEEeCCCcEEEEEcCCC
Q psy14817 87 SDMVSFDLVHTEH-RAHNQDVNCVAWN--PV-VPGMLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 87 ~~~~~~~~~~~~~-~~~~~~v~~~~~~--~~-~~~~l~~~~~d~~v~~wd~~~~ 136 (138)
.... ..... ......+-.|+.- .+ ++-+++|.-.+.+..+||....
T Consensus 215 ~~~~----i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~~ 264 (353)
T d1h6la_ 215 NGTV----IDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQGQ 264 (353)
T ss_dssp CCEE----EEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTT
T ss_pred ccee----eecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCCC
Confidence 1111 11111 1123455666542 22 1334555556888999998653
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=83.72 E-value=3.1 Score=25.11 Aligned_cols=85 Identities=12% Similarity=-0.015 Sum_probs=49.9
Q ss_pred eEEeEEecCCCccCeEEEEEecCCCeEEEee---CC------------CcEEEEeccCCCCCCceeeeeeeeeeeccccc
Q psy14817 40 WKCVCTLSGHHGRTIYDISWCHLTDLIATAC---GD------------DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 104 (138)
Q Consensus 40 ~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~---~d------------~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (138)
...+.++........+.|....++.+++|=. .+ +...+|...... .... ...-.
T Consensus 138 l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~~----------~~~~-~~~l~ 206 (340)
T d1v04a_ 138 LLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPND----------VRVV-AEGFD 206 (340)
T ss_dssp EEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSSC----------EEEE-EEEES
T ss_pred EEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCCc----------eEEE-cCCCC
Confidence 3445555543445678898888888777721 11 122333333222 1111 12235
Q ss_pred ceeEEEEccCCCC-EEEEEeCCCcEEEEEcCCC
Q psy14817 105 DVNCVAWNPVVPG-MLASCSDDGDVKLWQIKLE 136 (138)
Q Consensus 105 ~v~~~~~~~~~~~-~l~~~~~d~~v~~wd~~~~ 136 (138)
..+.++++|+ ++ ++++-+..+.|+.|++...
T Consensus 207 ~pNGI~~s~d-~~~lyVa~t~~~~i~~y~~~~~ 238 (340)
T d1v04a_ 207 FANGINISPD-GKYVYIAELLAHKIHVYEKHAN 238 (340)
T ss_dssp SEEEEEECTT-SSEEEEEEGGGTEEEEEEECTT
T ss_pred ccceeEECCC-CCEEEEEeCCCCeEEEEEeCCC
Confidence 6789999999 65 4566667888999988643
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=82.76 E-value=4.4 Score=26.22 Aligned_cols=22 Identities=5% Similarity=0.164 Sum_probs=19.5
Q ss_pred CCEEEEEeCCCcEEEEEcCCCC
Q psy14817 116 PGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 116 ~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.+++.++.|+.++-+|.++++
T Consensus 469 gglVF~G~~dg~l~A~Da~tGe 490 (560)
T d1kv9a2 469 GNLVFQGTAAGQMHAYSADKGE 490 (560)
T ss_dssp TTEEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEECCCCcEEEEECCCCc
Confidence 5678889999999999999886
|
| >d1c8ua2 d.38.1.3 (A:116-286) Thioesterase II (TesB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Thioesterase/thiol ester dehydrase-isomerase superfamily: Thioesterase/thiol ester dehydrase-isomerase family: Acyl-CoA thioesterase domain: Thioesterase II (TesB) species: Escherichia coli [TaxId: 562]
Probab=82.47 E-value=2.2 Score=22.78 Aligned_cols=64 Identities=13% Similarity=0.071 Sum_probs=37.2
Q ss_pred eEEEeeCCCcEEEEeccCCCCCCceeeeeeeeeeecccccceeEEEEccCCCCEEEEEeCCCcEEEEE
Q psy14817 65 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 132 (138)
Q Consensus 65 ~~~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~~wd 132 (138)
.+.+++.|.++.+...-... .-..+...........+-+..--|..+ |.+++++...|.+|+-|
T Consensus 108 ~~~~aSLDH~~wFH~~~~~~---~WlL~~~~s~~a~~gRgl~~g~i~~~d-G~LvAs~~QEgl~R~~~ 171 (171)
T d1c8ua2 108 GIQIATIDHSMWFHRPFNLN---EWLLYSVESTSASSARGFVRGEFYTQD-GVLVASTVQEGVMRNHN 171 (171)
T ss_dssp TEEEEEEEEEEEECSCCCTT---SCEEEEEEEEEEETTEEEEEEEEEETT-CCEEEEEEEEEEEEECC
T ss_pred ceeeEeeeeEEEEecCcccc---eeEEEEEECccccCCeeEEEEEEECCC-CCEEEEEEEEEEEEecC
Confidence 46667788777777432111 111111111122233345556668888 99999999999988743
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=81.01 E-value=4.9 Score=25.51 Aligned_cols=30 Identities=10% Similarity=0.096 Sum_probs=23.4
Q ss_pred cceeEEEEccCCCCEEEEEe-CCCcEEEEEcC
Q psy14817 104 QDVNCVAWNPVVPGMLASCS-DDGDVKLWQIK 134 (138)
Q Consensus 104 ~~v~~~~~~~~~~~~l~~~~-~d~~v~~wd~~ 134 (138)
.....+..+|+ +.+++.++ .+.++.++|++
T Consensus 275 KsPHGV~vSPD-GKyi~VaGKLs~tVSViD~~ 305 (459)
T d1fwxa2 275 NNPHGCNMAPD-KKHLCVAGKLSPTVTVLDVT 305 (459)
T ss_dssp SSCCCEEECTT-SSEEEEECTTSSBEEEEEGG
T ss_pred CCCCceEECCC-CCEEEEeCCcCCcEEEEEeh
Confidence 44677889999 88766555 59999999985
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=80.67 E-value=3 Score=27.15 Aligned_cols=22 Identities=18% Similarity=0.268 Sum_probs=19.7
Q ss_pred CCEEEEEeCCCcEEEEEcCCCC
Q psy14817 116 PGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 116 ~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.++++++.|+.++-+|.++++
T Consensus 497 gglVF~Gt~dg~l~A~Da~TGe 518 (582)
T d1flga_ 497 GNLVFTGTGDGYFKAFDAKSGK 518 (582)
T ss_dssp TTEEEEECTTSEEEEEETTTCC
T ss_pred CCeEEEeCCCCeEEEEECCCCc
Confidence 6788889999999999999987
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=80.14 E-value=4.7 Score=26.19 Aligned_cols=22 Identities=23% Similarity=0.169 Sum_probs=19.4
Q ss_pred CCEEEEEeCCCcEEEEEcCCCC
Q psy14817 116 PGMLASCSDDGDVKLWQIKLEN 137 (138)
Q Consensus 116 ~~~l~~~~~d~~v~~wd~~~~~ 137 (138)
+.+++.++.|+.++-+|.++++
T Consensus 475 gglVf~G~~dg~l~A~Da~tGe 496 (571)
T d2ad6a1 475 GGLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEECCCCeEEEEECCCCc
Confidence 5678889999999999999886
|