Psyllid ID: psy14842

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------86
MEENRIHHLLKPLTSLLKIFSMLPLSSGRSNPRHFLSYLYSLGVFILLLANFTLSYITMETGSASSLSLLIRYLISGLSVIFVLVTLYKAHTNQSLFQEVIEEVIDLSQRNMRSNRNVVFYRPNYRHLNAKIQFCCFTYLLVMFISFEILHSFLPNLTLFAVLNFLIPNLYSLLLSVEFYLLLNFVQNRLEKMYQYFQNFNQDSLLITDNRYYLSKISRDNVKSELVFLLKTFYSIFNICAKINTMFSAQILLVIILTHVLLTCIAYVMTQAIITYLTDAAATLQYNVMYTNLYWFGFHWVMIVLIVVPCENINTLKRNIMKTVHQIIIEDKMPNLTLEKRNIMKTVHQIIIEDKMPNLTLELEMFLMDLEKYNIQFTAHGFFSLEYSLFRKALVMDNSKFLELPEKPIMLPPFVDSAHRLPYHLTRKGRSVTDRVVCVLGFACPDITYSPAIYPIAAMLLHFMSEEECYNSLTSLVSCKHRTFVTQTKLLYEVTWRTVMHISKKHVKSAAAHLTRHRQGSRVERIYMDWMWWILQGLPFNHLVRVLDCYLHEGIKVLYRVAMAILLLFHKFSSSHNSDWMREISDHGIEAALSKFCRQMPVSPRKVLKVAFGIRALGSTYIQRVFIKTEMTLKSKSVLSGSRQLVRSKSNENLPTSQSQHNIQMMSHTLTIREVRVLDCYLHEGIKVLYRVAMAILLLFHKFSSSHNSDWMREISDHGIEAALSKFCRQMPVSPRKVLKVAFGIRALGSTYIQRVFIKTEMTLKSKSVLSGSRQLVRSKSNENLPTSQSQHNIQMMSHTLTIRELFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQHEPTLLMIKTTNNE
ccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEccccccHHHHHHHHHHHcHHHHHHHHHHHHccccHHHHHHHHHHHHcHHHccccccccEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcHHHHcccHHHHHHHHHHHcccccccHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccHHHHHHHHccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccccHHHHHHcHHHHHHHHHHHHHcccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcHHHHHHHHHHHHHHccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccHHHHccccccccccccccccccccccccHHHHHHHHHcccccccccccEEEEEcccccccHHHHHHHHcccccEEEEEEccccc
cHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccEEHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcHccHEEEEEcccHHHcccccccEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccccccEEEEEHcHHHHHHHHHHHcHHHHHHHHHHcccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccccHHHHHHHHHHcccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccEccccEEEEEcccccccccHHHHHHHccccEEEHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccccccccHHHHHHHHHHcccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccEEEEEcccccccccccEHHHcccccEccHHHHHHHHHHccHHEEEcccEEEEEEccccccHHHHHHHccccccEEEEEEEcccc
meenrihhLLKPLTSLLKIFsmlplssgrsnprhFLSYLYSLGVFILLLANFTLSYITMETGSASSLSLLIRYLISGLSVIFVLVTLYKAHTNQSLFQEVIEEVIDLSQRnmrsnrnvvfyrpnyrhlnAKIQFCCFTYLLVMFISFEIlhsflpnltLFAVLNFLIPNLYSLLLSVEFYLLLNFVQNRLEKMYQYFQNFnqdsllitdnryylskisrDNVKSELVFLLKTFYSIFNICAKINTMFSAQILLVIILTHVLLTCIAYVMTQAIITYLTDAAATLQYNVMYTNLYWFGFHWVMIVLIVVPCENINTLKRNIMKTVHQIIIedkmpnltleKRNIMKTVHQIIIEDKMPNLTLELEMFLMDLEKYNIQFTAHGFFSLEYSLFRKALVMdnskflelpekpimlppfvdsahrlpyhltrkgrsvTDRVVCVLgfacpdityspaiYPIAAMLLHFMSEEECYNSltslvsckhrtfvtqTKLLYEVTWRTVMHISKKHVKSAAAHLTRHRQGSRVERIYMDWMWWIlqglpfnhlVRVLDCYLHEGIKVLYRVAMAILLLFHkfssshnsdWMREISDHGIEAALSKFCrqmpvsprkvLKVAFGIRALGSTYIQRVFIKTEMTLksksvlsgsrqlvrsksnenlptsqsqhNIQMMSHTLTIREVRVLDCYLHEGIKVLYRVAMAILLLFHkfssshnsdWMREISDHGIEAALSKFCrqmpvsprkvLKVAFGIRALGSTYIQRVFIKTEMTLksksvlsgsrqlvrsksnenlptsqsqhNIQMMSHTLTIRELFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQHEPTLLMIKTTNNE
MEENRIHHLLKPLTSLLKIFSMLPLSSGRSNPRHFLSYLYSLGVFILLLANFTLSYITMETGSASSLSLLIRYLISGLSVIFVLVTLYKAHTNQSLFQEVIEEVIDLSQRNMRSNRNVVFYRPNYRHLNAKIQFCCFTYLLVMFISFEILHSFLPNLTLFAVLNFLIPNLYSLLLSVEFYLLLNFVQNRLEKMYQYFQNFNQDSLLITDNRYYLSKISRDNVKSELVFLLKTFYSIFNICAKINTMFSAQILLVIILTHVLLTCIAYVMTQAIITYLTDAAATLQYNVMYTNLYWFGFHWVMIVLIVVPCENINTLKRNIMKTVHQIIIedkmpnltlekRNIMKTVHQIIIEDKMPNLTLELEMFLMDLEKYNIQFTAHGFFSLEYSLFRKALVMDNSKFLELPEKPIMLPPFVDSAHRLPYHLtrkgrsvtdRVVCVLGFACPDITYSPAIYPIAAMLLHFMSEEECYNSLTSLVSCKHRTFVTQTKLLYEVTWRTVMHISKKHVksaaahltrhrqgsrVERIYMDWMWWILQGLPFNHLVRVLDCYLHEGIKVLYRVAMAILLLFHKFSSSHNSDWMREISDHGIEAALSKFCRQMPVSPRKVLKVAFGIRALGSTYIQRVFIKTemtlksksvlsgsrqlvrsksnenlptsqsqhniQMMSHTLTIREVRVLDCYLHEGIKVLYRVAMAILLLFHKFSSSHNSDWMREISDHGIEAALSKFCRQMPVSPRKVLKVAFGIRALGSTYIQRVFIKTemtlksksvlsgsrqlvrsksnenlptsqsqhnIQMMSHTLTIRELFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQHeptllmikttnne
MEENRIHHLLKPLTSLLKIFSMLPLSSGRSNPRHFLSYLYSLGVFILLLANFTLSYITMETGsasslsllirylisglsVIFVLVTLYKAHTNQSLFQEVIEEVIDLSQRNMRSNRNVVFYRPNYRHLNAKIQFCCFTYLLVMFISFEILHSFLPNLTLFAVLNFLIPNlyslllsvefylllNFVQNRLEKMYQYFQNFNQDSLLITDNRYYLSKISRDNVKSELVFLLKTFYSIFNICAKINTMFSAQillviilthvlltciAYVMTQAIITYLTDAAATLQYNVMYTNLYWFGFHWVMIVLIVVPCENINTLKRNIMKTVHQIIIEDKMPNLTLEKRNIMKTVHQIIIEDKMPNLTLELEMFLMDLEKYNIQFTAHGFFSLEYSLFRKALVMDNSKFLELPEKPIMLPPFVDSAHRLPYHLTRKGRSVTDRVVCVLGFACPDITYSPAIYPIAAMLLHFMSEEECYNSLTSLVSCKHRTFVTQTKLLYEVTWRTVMHISKKHVKSAAAHLTRHRQGSRVERIYMDWMWWILQGLPFNHLVRVLDCYLHEGIKVLYRVAMAILLLFHKFSSSHNSDWMREISDHGIEAALSKFCRQMPVSPRKVLKVAFGIRALGSTYIQRVFIKTEMTLKSKSVLSGSRQLVRSKSNENLPTSQSQHNIQMMSHTLTIREVRVLDCYLHEGIKVLYRVAMAILLLFHKFSSSHNSDWMREISDHGIEAALSKFCRQMPVSPRKVLKVAFGIRALGSTYIQRVFIKTEMTLKSKSVLSGSRQLVRSKSNENLPTSQSQHNIQMMSHTLTIRELFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQHEPTLLMIKTTNNE
******HHLLKPLTSLLKIFSMLPLSSGRSNPRHFLSYLYSLGVFILLLANFTLSYITMETGSASSLSLLIRYLISGLSVIFVLVTLYKAHTNQSLFQEVIEEVIDLSQRNMRSNRNVVFYRPNYRHLNAKIQFCCFTYLLVMFISFEILHSFLPNLTLFAVLNFLIPNLYSLLLSVEFYLLLNFVQNRLEKMYQYFQNFNQDSLLITDNRYYLSKISRDNVKSELVFLLKTFYSIFNICAKINTMFSAQILLVIILTHVLLTCIAYVMTQAIITYLTDAAATLQYNVMYTNLYWFGFHWVMIVLIVVPCENINTLKRNIMKTVHQIIIEDKMPNLTLEKRNIMKTVHQIIIEDKMPNLTLELEMFLMDLEKYNIQFTAHGFFSLEYSLFRKALVMDNSKFLELPEKPIMLPPFVDSAHRLPYHLTRKGRSVTDRVVCVLGFACPDITYSPAIYPIAAMLLHFMSEEECYNSLTSLVSCKHRTFVTQTKLLYEVTWRTVMHISKKHVKSAAAHLTRHRQGSRVERIYMDWMWWILQGLPFNHLVRVLDCYLHEGIKVLYRVAMAILLLFHKFSSSHNSDWMREISDHGIEAALSKFCRQMPVSPRKVLKVAFGIRALGSTYIQRVFIKTEMTL********************************MSHTLTIREVRVLDCYLHEGIKVLYRVAMAILLLFHKFSSSHNSDWMREISDHGIEAALSKFCRQMPVSPRKVLKVAFGIRALGSTYIQRVFIKTEMTL********************************MSHTLTIRELFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQHEPTLLMI******
****RIH*LLKPLTSLLKIFSMLPLSSGRSNPRHFLSYLYSLGVFILLLANFTLSYITMETGSASSLSLLIRYLISGLSVIFVLVTLYKAHTNQSLFQEVIEEVIDLSQRNMRSNRNVVFYRPNYRHLNAKIQFCCFTYLLVMFISFEILHSFLPNLTLFAVLNFLIPNLYSLLLSVEFYLLLNFVQNRLEKMYQYFQNFNQDSLLITDNRYYLSKISRDNVKSELVFLLKTFYSIFNICAKINTMFSAQILLVIILTHVLLTCIAYVMTQAIITYLTDAAATLQYNVMYTNLYWFGFHWVMIVLIVVPCENINT***N***TVHQIIIEDKM**********************MPNLTLELEMFLMDLEKYNIQFTAHGFFSLEYS****************PEKPIMLPPFVDSAHRLPYHLTRKGRSVTDRVVCVLGFACPDITYSPAIYPIAAMLLHFMSEEECYNSLTSLVSCKHRTFVTQTKLLYEVTWRTVMHISKKHVKSAAAHLTRHRQGSRVERIYMDWMWWILQGLPFNHLVRVLDCYLHEGIKVLYRVAMAILLLFHKFSS*********ISDHGIEAALSKFCRQMPVSPRKVLKVAFGIRALGSTYI***********************************QSQHNIQMMSHTLTIREVRVLDCYLHEGIKVLYRVAMAILLLFHKF***************GIEAALSKFCRQMPVSPRKVLKVAFGIRALGSTYIQ*V*************************************IQMMSHTLTIRELFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQHEPTLLMIKTT***
MEENRIHHLLKPLTSLLKIFSMLPLSSGRSNPRHFLSYLYSLGVFILLLANFTLSYITMETGSASSLSLLIRYLISGLSVIFVLVTLYKAHTNQSLFQEVIEEVIDLSQRNMRSNRNVVFYRPNYRHLNAKIQFCCFTYLLVMFISFEILHSFLPNLTLFAVLNFLIPNLYSLLLSVEFYLLLNFVQNRLEKMYQYFQNFNQDSLLITDNRYYLSKISRDNVKSELVFLLKTFYSIFNICAKINTMFSAQILLVIILTHVLLTCIAYVMTQAIITYLTDAAATLQYNVMYTNLYWFGFHWVMIVLIVVPCENINTLKRNIMKTVHQIIIEDKMPNLTLEKRNIMKTVHQIIIEDKMPNLTLELEMFLMDLEKYNIQFTAHGFFSLEYSLFRKALVMDNSKFLELPEKPIMLPPFVDSAHRLPYHLTRKGRSVTDRVVCVLGFACPDITYSPAIYPIAAMLLHFMSEEECYNSLTSLVSCKHRTFVTQTKLLYEVTWRTVMHISKK**************GSRVERIYMDWMWWILQGLPFNHLVRVLDCYLHEGIKVLYRVAMAILLLFHKFSSSHNSDWMREISDHGIEAALSKFCRQMPVSPRKVLKVAFGIRALGSTYIQRVFIKTEMTLKSKSVLSGSRQLVRSKSNENLPTSQSQHNIQMMSHTLTIREVRVLDCYLHEGIKVLYRVAMAILLLFHKFSSSHNSDWMREISDHGIEAALSKFCRQMPVSPRKVLKVAFGIRALGSTYIQRVFIKTEMTLKSKSVLSGSRQLVRSKSNENLPTSQSQHNIQMMSHTLTIRELFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQHEPTLLMIKTTNNE
*EENRIHHLLKPLTSLLKIFSMLPLSSGRSNPRHFLSYLYSLGVFILLLANFTLSYITMETGSASSLSLLIRYLISGLSVIFVLVTLYKAHTNQSLFQEVIEEVIDLSQRNMRSNRNVVFYRPNYRHLNAKIQFCCFTYLLVMFISFEILHSFLPNLTLFAVLNFLIPNLYSLLLSVEFYLLLNFVQNRLEKMYQYFQNFNQDSLLITDNRYYLSKISRDNVKSELVFLLKTFYSIFNICAKINTMFSAQILLVIILTHVLLTCIAYVMTQAIITYLTDAAATLQYNVMYTNLYWFGFHWVMIVLIVVPCENINTLKRNIMKTVHQIIIEDKMPNLTLEKRNIMKTVHQIIIEDKMPNLTLELEMFLMDLEKYNIQFTAHGFFSLEYSLFRKALVMDNSKFLELPEKPIMLPPFVDSAHRLPYHLTRKGRSVTDRVVCVLGFACPDITYSPAIYPIAAMLLHFMSEEECYNSLTSLVSCKHRTFVTQTKLLYEVTWRTVMHISKKHVKSAAAHLTRHRQGSRVERIYMDWMWWILQGLPFNHLVRVLDCYLHEGIKVLYRVAMAILLLFHKFSSSHNSDWMREISDHGIEAALSKFCRQMPVSPRKVLKVAFGIRALGSTYIQRVFIKTEMTLKSKSVLSGSRQLVRSKSNENLPTSQSQHNIQMMSHTLTIREVRVLDCYLHEGIKVLYRVAMAILLLFHKFSSSHNSDWMREISDHGIEAALSKFCRQMPVSPRKVLKVAFGIRALGSTYIQRVFIKTEMTLKSKSVLSGSRQLVRSKSNENLPTSQSQHNIQMMSHTLTIRELFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQHEPTLLMIKTT***
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEENRIHHLLKPLTSLLKIFSMLPLSSGRSNPRHFLSYLYSLGVFILLLANFTLSYITMETGSASSLSLLIRYLISGLSVIFVLVTLYKAHTNQSLFQEVIEEVIDLSQRNMRSNRNVVFYRPNYRHLNAKIQFCCFTYLLVMFISFEILHSFLPNLTLFAVLNFLIPNLYSLLLSVEFYLLLNFVQNRLEKMYQYFQNFNQDSLLITDNRYYLSKISRDNVKSELVFLLKTFYSIFNICAKINTMFSAQILLVIILTHVLLTCIAYVMTQAIITYLTDAAATLQYNVMYTNLYWFGFHWVMIVLIVVPCENINTLKRNIMKTVHQIIIEDKMPNLTLEKRNIMKTVHQIIIEDKMPNLTLELEMFLMDLEKYNIQFTAHGFFSLEYSLFRKALVMDNSKFLELPEKPIMLPPFVDSAHRLPYHLTRKGRSVTDRVVCVLGFACPDITYSPAIYPIAAMLLHFMSEEECYNSLTSLVSCKHRTFVTQTKLLYEVTWRTVMHISKKHVKSAAAHLTRHRQGSRVERIYMDWMWWILQGLPFNHLVRVLDCYLHEGIKVLYRVAMAILLLFHKFSSSHNSDWMREISDHGIEAALSKFCRQMPVSPRKVLKVAFGIRALGSTYIQRVFIKTEMTLKSKSVLSGSRQLVRSKSNENLPTSQSQHNIQMMSHTLTIREVRVLDCYLHEGIKVLYRVAMAILLLFHKFSSSHNSDWMREISDHGIEAALSKFCRQMPVSPRKVLKVAFGIRALGSTYIQRVFIKTEMTLKSKSVLSGSRQLVRSKSNENLPTSQSQHNIQMMSHTLTIRELFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQHEPTLLMIKTTNNE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query858 2.2.26 [Sep-21-2011]
Q29RJ2516 TBC1 domain family member yes N/A 0.269 0.447 0.311 2e-26
Q9ULP9559 TBC1 domain family member yes N/A 0.297 0.456 0.298 5e-26
Q3UUG6561 TBC1 domain family member yes N/A 0.265 0.406 0.318 7e-26
A1A5K6562 TBC1 domain family member N/A N/A 0.256 0.391 0.309 1e-25
Q08CX5562 TBC1 domain family member yes N/A 0.328 0.501 0.274 1e-25
>sp|Q29RJ2|TBC24_BOVIN TBC1 domain family member 24 OS=Bos taurus GN=TBC1D24 PE=2 SV=1 Back     alignment and function desciption
 Score =  121 bits (304), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 121/244 (49%), Gaps = 13/244 (5%)

Query: 411 LPPFVDSAHRLPYHLTRKGRSVTDRVVCVLGFACPDITYSPAIYPIAAMLLHFMSEE-EC 469
           LP FVD+     Y L  KG     +++  +    PD+++ PA+  + A+LLH+ ++E EC
Sbjct: 92  LPEFVDNTQVPSYCLNSKGEGAVRKILLCISNQFPDVSFCPALPAVVALLLHYSADEAEC 151

Query: 470 YNSLTSLVSCKH--RTFVTQTKLLYEVTWRTVMHISKKHVKSAAAHLTRHRQGSRVERIY 527
           +     +++C    R  V Q+ L +E +  T   +  K+ +  AAH         V ++Y
Sbjct: 152 FEKACRILACNDSSRKLVDQSFLAFESSCMTFGDLVNKYCQ--AAHKLMVAVSEDVLQVY 209

Query: 528 MDWMWWILQGLPFNHLVRVLDCYLHEGIKVLYRVAMAILLLFHKFSSSHNSDWMREISDH 587
            DW  W+   LP ++  RV D +L EG KVLYRVA+AIL  FHK  +       + +   
Sbjct: 210 ADWQRWLFGELPLSYFARVFDVFLVEGYKVLYRVALAILKFFHKVRAG------QPLESD 263

Query: 588 GIEAALSKFCRQMP--VSPRKVLKVAFGIRALGSTYIQRVFIKTEMTLKSKSVLSGSRQL 645
            ++  +  F R +   VSP K+L+ AF IR      IQ + +  E  LK K +    + +
Sbjct: 264 NVKQDIRAFVRDIAKTVSPEKLLEKAFAIRLFSRKEIQLLQMANEKALKQKGITVKQKSV 323

Query: 646 VRSK 649
             SK
Sbjct: 324 SLSK 327
May act as a GTPase-activating protein for Rab family protein(s).
Bos taurus (taxid: 9913)
>sp|Q9ULP9|TBC24_HUMAN TBC1 domain family member 24 OS=Homo sapiens GN=TBC1D24 PE=1 SV=2 Back     alignment and function description
>sp|Q3UUG6|TBC24_MOUSE TBC1 domain family member 24 OS=Mus musculus GN=Tbc1d24 PE=2 SV=2 Back     alignment and function description
>sp|A1A5K6|TBC24_XENLA TBC1 domain family member 24 OS=Xenopus laevis GN=tbc1d24 PE=2 SV=1 Back     alignment and function description
>sp|Q08CX5|TBC24_XENTR TBC1 domain family member 24 OS=Xenopus tropicalis GN=tbc1d24 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query858
340729106580 PREDICTED: TBC1 domain family member 24- 0.313 0.463 0.738 1e-121
350401387580 PREDICTED: TBC1 domain family member 24- 0.313 0.463 0.738 1e-121
383864506580 PREDICTED: TBC1 domain family member 24- 0.313 0.463 0.738 1e-121
350401384570 PREDICTED: TBC1 domain family member 24- 0.326 0.491 0.735 1e-120
328788626580 PREDICTED: TBC1 domain family member 24- 0.313 0.463 0.738 1e-120
383864504599 PREDICTED: TBC1 domain family member 24- 0.283 0.405 0.75 1e-120
380013699599 PREDICTED: TBC1 domain family member 24- 0.283 0.405 0.75 1e-119
332018338599 TBC1 domain family member 24 [Acromyrmex 0.283 0.405 0.735 1e-118
383864508577 PREDICTED: TBC1 domain family member 24- 0.326 0.485 0.717 1e-118
328788628577 PREDICTED: TBC1 domain family member 24- 0.326 0.485 0.717 1e-117
>gi|340729106|ref|XP_003402849.1| PREDICTED: TBC1 domain family member 24-like [Bombus terrestris] Back     alignment and taxonomy information
 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 206/279 (73%), Positives = 233/279 (83%)

Query: 403 ELPEKPIMLPPFVDSAHRLPYHLTRKGRSVTDRVVCVLGFACPDITYSPAIYPIAAMLLH 462
           ELPEK IMLPPFVDS H L YHLTRKGRSV DR+V VLG+ACPDITYSP++YPI A+LLH
Sbjct: 123 ELPEKSIMLPPFVDSTHCLSYHLTRKGRSVADRIVSVLGYACPDITYSPSLYPITALLLH 182

Query: 463 FMSEEECYNSLTSLVSCKHRTFVTQTKLLYEVTWRTVMHISKKHVKSAAAHLTRHRQGSR 522
           FM EEECY+ + SLV+ K + F+TQTKLLYEVTW+TV  I+KKHVKSAA HL RH  GSR
Sbjct: 183 FMPEEECYHCMASLVAAKDKMFITQTKLLYEVTWKTVEQITKKHVKSAAVHLARHCSGSR 242

Query: 523 VERIYMDWMWWILQGLPFNHLVRVLDCYLHEGIKVLYRVAMAILLLFHKFSSSHNSDWMR 582
            ERIYMDWMWWILQ LPF HLVRV+DC+LHEGIKV YRVAMAI+LLF+K SS  NS+WM 
Sbjct: 243 AERIYMDWMWWILQLLPFQHLVRVMDCFLHEGIKVFYRVAMAIVLLFYKHSSLQNSEWMN 302

Query: 583 EISDHGIEAALSKFCRQMPVSPRKVLKVAFGIRALGSTYIQRVFIKTEMTLKSKSVLSGS 642
           EIS +GI+AALSKFCRQ PV+P K L+ AFGIR L S YI RVF++TEM LKSKSV+SGS
Sbjct: 303 EISKNGIDAALSKFCRQTPVTPAKFLRTAFGIRGLSSAYISRVFLRTEMALKSKSVISGS 362

Query: 643 RQLVRSKSNENLPTSQSQHNIQMMSHTLTIREVRVLDCY 681
           + L RS+S +NLPTSQSQ NIQMMSHTLTIRE    D Y
Sbjct: 363 KSLARSRSTDNLPTSQSQVNIQMMSHTLTIREKECEDTY 401

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|350401387|ref|XP_003486135.1| PREDICTED: TBC1 domain family member 24-like isoform 2 [Bombus impatiens] Back     alignment and taxonomy information
>gi|383864506|ref|XP_003707719.1| PREDICTED: TBC1 domain family member 24-like isoform 2 [Megachile rotundata] Back     alignment and taxonomy information
>gi|350401384|ref|XP_003486134.1| PREDICTED: TBC1 domain family member 24-like isoform 1 [Bombus impatiens] Back     alignment and taxonomy information
>gi|328788626|ref|XP_003251158.1| PREDICTED: TBC1 domain family member 24-like isoform 1 [Apis mellifera] Back     alignment and taxonomy information
>gi|383864504|ref|XP_003707718.1| PREDICTED: TBC1 domain family member 24-like isoform 1 [Megachile rotundata] Back     alignment and taxonomy information
>gi|380013699|ref|XP_003690887.1| PREDICTED: TBC1 domain family member 24-like [Apis florea] Back     alignment and taxonomy information
>gi|332018338|gb|EGI58943.1| TBC1 domain family member 24 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|383864508|ref|XP_003707720.1| PREDICTED: TBC1 domain family member 24-like isoform 3 [Megachile rotundata] Back     alignment and taxonomy information
>gi|328788628|ref|XP_397230.3| PREDICTED: TBC1 domain family member 24-like isoform 2 [Apis mellifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query858
FB|FBgn0032901592 sky "skywalker" [Drosophila me 0.315 0.457 0.641 1.5e-119
UNIPROTKB|H3BQ06376 H3BQ06 "Uncharacterized protei 0.256 0.585 0.326 1.5e-25
UNIPROTKB|F1N534516 TBC1D24 "TBC1 domain family me 0.269 0.447 0.319 9e-25
UNIPROTKB|Q29RJ2516 TBC1D24 "TBC1 domain family me 0.269 0.447 0.319 9e-25
MGI|MGI:2443456561 Tbc1d24 "TBC1 domain family, m 0.331 0.506 0.289 1.3e-24
UNIPROTKB|F1NEU9 564 TBC1D24 "Uncharacterized prote 0.203 0.310 0.383 1.4e-24
RGD|1306143562 Tbc1d24 "TBC1 domain family, m 0.331 0.505 0.285 2.2e-24
UNIPROTKB|Q9ULP9559 TBC1D24 "TBC1 domain family me 0.297 0.456 0.306 2.8e-24
UNIPROTKB|F1Q1S8542 TBC1D24 "Uncharacterized prote 0.265 0.420 0.318 4.2e-24
UNIPROTKB|F1Q1S9559 TBC1D24 "Uncharacterized prote 0.297 0.456 0.295 4.7e-24
FB|FBgn0032901 sky "skywalker" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 917 (327.9 bits), Expect = 1.5e-119, Sum P(2) = 1.5e-119
 Identities = 175/273 (64%), Positives = 212/273 (77%)

Query:   403 ELPEKPIMLPPFVDSAHRLPYHLTRKGRSVTDRVVCVLGFACPDITYSPAIYPIAAMLLH 462
             EL EKPIMLP FVD+ H LPYHLT  GR+V DR+V VLG+ CPDITYSP +YPI ++LLH
Sbjct:   129 ELSEKPIMLPAFVDATHCLPYHLTSTGRAVADRIVNVLGYDCPDITYSPVLYPITSILLH 188

Query:   463 FMSEEECYNSLTSLVSCKHRTFVTQTKLLYEVTWRTVMHISKKHVKSAAAHLTRHRQGSR 522
             FMSEEE Y  L  LV  K + F+ QTKL +EVTW+TVM I+KKH KSA ++  R   G +
Sbjct:   189 FMSEEEAYICLAGLVGSKEKVFINQTKLQHEVTWKTVMQIAKKHTKSATSYFQRICPGLK 248

Query:   523 VERIYMDWMWWILQGLPFNHLVRVLDCYLHEGIKVLYRVAMAILLLFHKFSSSHNSDWMR 582
             +ERI+MDW WWIL GLPF HLVR++DCY HEGIKVLYRVA+ IL LFHK   S+N +W  
Sbjct:   249 LERIFMDWCWWILAGLPFQHLVRIMDCYFHEGIKVLYRVALVILNLFHKECQSNN-EWSP 307

Query:   583 EISDHGIEAALSKFCRQMPVSPRKVLKVAFGIRALGSTYIQRVFIKTEMTLKSKSVL-SG 641
             +   + I  AL KFC+++PVSP K+L  AF IR L + YI R+FIKTEM LKS+SVL SG
Sbjct:   308 DNIKNDIGNALIKFCKKIPVSPAKLLHAAFSIRGLSTQYISRIFIKTEMLLKSRSVLTSG 367

Query:   642 SRQLVRSKSNENLPTSQSQHNIQMMSHTLTIRE 674
             S+QL++S+S++NLPTSQSQ NIQMMSHTLTIRE
Sbjct:   368 SKQLIKSRSSDNLPTSQSQVNIQMMSHTLTIRE 400
GO:0005097 "Rab GTPase activator activity" evidence=IEA
GO:0005622 "intracellular" evidence=IEA
GO:0032313 "regulation of Rab GTPase activity" evidence=IEA
GO:0031594 "neuromuscular junction" evidence=IDA
GO:0043195 "terminal bouton" evidence=IDA
UNIPROTKB|H3BQ06 H3BQ06 "Uncharacterized protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1N534 TBC1D24 "TBC1 domain family member 24" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q29RJ2 TBC1D24 "TBC1 domain family member 24" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:2443456 Tbc1d24 "TBC1 domain family, member 24" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1NEU9 TBC1D24 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|1306143 Tbc1d24 "TBC1 domain family, member 24" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q9ULP9 TBC1D24 "TBC1 domain family member 24" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q1S8 TBC1D24 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q1S9 TBC1D24 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query858
smart00584 165 smart00584, TLDc, domain in TBC and LysM domain co 2e-16
pfam08395370 pfam08395, 7tm_7, 7tm Chemosensory receptor 3e-15
pfam00566206 pfam00566, RabGAP-TBC, Rab-GTPase-TBC domain 3e-13
smart00164216 smart00164, TBC, Domain in Tre-2, BUB2p, and Cdc16 8e-11
pfam07534 136 pfam07534, TLD, TLD 0.001
>gnl|CDD|214733 smart00584, TLDc, domain in TBC and LysM domain containing proteins Back     alignment and domain information 
 Score = 77.4 bits (191), Expect = 2e-16
 Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 798 SHTLTIRELFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYYRVEQ-HEPTLLMIKTTN 856
           S  L+   L  + S LP R   Y   LLY++ +HG SL T Y +VE    PTLL+IK T+
Sbjct: 1   SSILSEEILALINSHLPTRAEGYPWTLLYSSSQHGYSLNTLYRKVEGYRPPTLLIIKDTD 60

Query: 857 NE 858
            E
Sbjct: 61  GE 62

Length = 165
>gnl|CDD|219819 pfam08395, 7tm_7, 7tm Chemosensory receptor Back     alignment and domain information
>gnl|CDD|215997 pfam00566, RabGAP-TBC, Rab-GTPase-TBC domain Back     alignment and domain information
>gnl|CDD|214540 smart00164, TBC, Domain in Tre-2, BUB2p, and Cdc16p Back     alignment and domain information
>gnl|CDD|219457 pfam07534, TLD, TLD Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 858
KOG2801|consensus 559 100.0
KOG2058|consensus436 100.0
KOG4347|consensus671 99.97
smart00164199 TBC Domain in Tre-2, BUB2p, and Cdc16p. Probable R 99.95
KOG2222|consensus 848 99.94
COG5210496 GTPase-activating protein [General function predic 99.94
PF00566214 RabGAP-TBC: Rab-GTPase-TBC domain; InterPro: IPR00 99.94
KOG2223|consensus586 99.91
KOG4436|consensus948 99.84
KOG1092|consensus484 99.84
KOG1102|consensus397 99.82
KOG4567|consensus370 99.81
KOG1093|consensus725 99.64
KOG2221|consensus267 99.64
KOG2224|consensus781 99.47
KOG4436|consensus 948 99.38
KOG2197|consensus488 99.3
KOG2595|consensus395 99.08
smart00584 165 TLDc domain in TBC and LysM domain containing prot 99.04
KOG1091|consensus625 99.04
PF08395372 7tm_7: 7tm Chemosensory receptor; InterPro: IPR013 99.0
KOG2801|consensus559 98.54
KOG2372|consensus 241 98.2
KOG3636|consensus 669 97.74
COG5142 212 OXR1 Oxidation resistance protein [DNA replication 97.67
KOG2058|consensus436 97.45
KOG1102|consensus397 97.34
KOG2223|consensus586 96.87
KOG4347|consensus 671 95.83
PF00566214 RabGAP-TBC: Rab-GTPase-TBC domain; InterPro: IPR00 95.08
COG5210496 GTPase-activating protein [General function predic 92.26
PF149611296 BROMI: Broad-minded protein 91.69
KOG2222|consensus 848 88.78
KOG4636|consensus 483 88.15
>KOG2801|consensus Back     alignment and domain information 
Probab=100.00  E-value=5.4e-61  Score=502.42  Aligned_cols=336  Identities=33%  Similarity=0.605  Sum_probs=297.4

Q ss_pred             cccccccchhhHhHHHHH------------hccCccccccccCC--------cCCCCCcccCCCCCCCCCCchhHHHHHH
Q psy14842        376 QFTAHGFFSLEYSLFRKA------------LVMDNSKFLELPEK--------PIMLPPFVDSAHRLPYHLTRKGRSVTDR  435 (858)
Q Consensus       376 ~~~~~gY~~ie~sLrgq~------------l~~~pg~Y~eLl~k--------s~~lPefiD~~rt~~y~ln~~Gq~sLrR  435 (858)
                      ++.++|||.-+..++|+.            ..++.+.|+++.-+        ..|+|+++|....+.||++..|..+.|+
T Consensus        37 qlarqgywaqshalrgkvyqrlirdipcrtvtpdasvysdivgkivgkhsssclplpefvdntqvpsyclnargegavrk  116 (559)
T KOG2801|consen   37 QLARQGYWAQSHALRGKVYQRLIRDIPCRTVTPDASVYSDIVGKIVGKHSSSCLPLPEFVDNTQVPSYCLNARGEGAVRK  116 (559)
T ss_pred             HHHhcchHHhhhhhhhHHHHHHHhcCCccccCCchhHHHHHHHHHhccCCcccccchhhcccCcCchhhhcCcCchhHHH
Confidence            466789998888888873            55678899987654        2358999999999999999999999999


Q ss_pred             HHhHHhhcCCCCcccCChhHHHHHHHhhc-ChhHHHHHHHHhhhcc--ccCcccccHHHHHHHHHHHHHHHHHHhHHHHH
Q psy14842        436 VVCVLGFACPDITYSPAIYPIAAMLLHFM-SEEECYNSLTSLVSCK--HRTFVTQTKLLYEVTWRTVMHISKKHVKSAAA  512 (858)
Q Consensus       436 IL~AYS~~nPdIGYCQGMN~IAAlLLlym-dEEdAFW~Lv~LLe~~--~~~Yf~qs~~~l~~~~~tfe~LLkk~lPkL~~  512 (858)
                      ||.+.++..|||.+||.++.++|+||+|. ||.+||---++++...  .+...++++..++..|++|.+++++++...++
T Consensus       117 ilKOGanqfpdisfcpalpavvalllhysideaecfekacrilacndpgrrlidqsflafesscmtfgdlvnkycqaahk  196 (559)
T KOG2801|consen  117 ILLCLANQFPDISFCPALPAVVALLLHYSIDEAECFEKACRILACNDPGRRLIDQSFLAFESSCMTFGDLVNKYCQAAHK  196 (559)
T ss_pred             HHHHHhccCCCcccCcchHHHHHHHHHhcccHHHHHHHhheeeeecCcchhhhhhHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence            99999999999999999999999999996 9999999999999887  57789999999999999999999999988766


Q ss_pred             HHHhhcCCCChhHhhHHHHHHccCCCCchhhHHHHHHHHhcCchHHHHHHHHHHHHhhhhccCCCchhhhhcchhHHHHH
Q psy14842        513 HLTRHRQGSRVERIYMDWMWWILQGLPFNHLVRVLDCYLHEGIKVLYRVAMAILLLFHKFSSSHNSDWMREISDHGIEAA  592 (858)
Q Consensus       513 HL~kl~~Gidi~~~~s~WFLTLFs~LPfe~vLRIWD~FLlEG~KVLfRVALAILKl~ek~Lls~~sewLl~l~~edv~~~  592 (858)
                      -+-..  +.|+...|.+|-.|+|+++|+-                                                   
T Consensus       197 lmvav--sedvlqvyadwqrwlfgelplc---------------------------------------------------  223 (559)
T KOG2801|consen  197 LMVAV--SEDVLQVYADWQRWLFGELPLC---------------------------------------------------  223 (559)
T ss_pred             Hhhhh--hHHHHHHHHHHHHHHhccchHH---------------------------------------------------
Confidence            55543  3456666777777777666631                                                   


Q ss_pred             HHHhhhhCCCCHHHHHHHHHccCCCChhHHHHHHHHHHhhhhcccccccccccccccCCCCCCCCccchhhhhccccccc
Q psy14842        593 LSKFCRQMPVSPRKVLKVAFGIRALGSTYIQRVFIKTEMTLKSKSVLSGSRQLVRSKSNENLPTSQSQHNIQMMSHTLTI  672 (858)
Q Consensus       593 L~~F~KnIpiDpDkLLk~AFsIr~LSrtyIqRvRlK~EmaLKsesvksgsrqL~RSrSSdnLP~SqsQ~~I~~~s~~lp~  672 (858)
                                                                                                      
T Consensus       224 --------------------------------------------------------------------------------  223 (559)
T KOG2801|consen  224 --------------------------------------------------------------------------------  223 (559)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ceeecchhccccchhhHHHHHHHHHHHHHhhcCCCCChhhhhhhhhhHHHHHhhhhhcCCCChhHHHHHhhhccccchhH
Q psy14842        673 REVRVLDCYLHEGIKVLYRVAMAILLLFHKFSSSHNSDWMREISDHGIEAALSKFCRQMPVSPRKVLKVAFGIRALGSTY  752 (858)
Q Consensus       673 ~~~r~~DvfL~EG~KVlyRvaLALLk~~~k~~~~~~~~~~~~~~k~~i~~~l~~~~~~~~~sp~kLl~~Af~ir~~sr~e  752 (858)
                      +..||+||||+|||||+|||||||||||||.+++++.|+  |.+|+||+.|+|++++  +++|+|||+|||+||++||+|
T Consensus       224 yfarvfdvflvegykvlyrvalailkffhkvragqples--dsvkqdirtfvrdiak--tvspekllekafairlfsrke  299 (559)
T KOG2801|consen  224 YFARVFDVFLVEGYKVLYRVALAILKFFHKVRAGQPLES--DSVKQDIRTFVRDIAK--TVSPEKLLEKAFAIRLFSRKE  299 (559)
T ss_pred             HHHHHhhheeecchHHHHHHHHHHHHHHHHhhcCCCCcc--chHHHHHHHHHHHHHh--hCCHHHHHHHHHHHHHhhHHH
Confidence            223578999999999999999999999999999999998  7899999999999999  999999999999999999999


Q ss_pred             HHHHHHHHHhhhhccccc-------cccccceecccCCCCCCcccccccccCCcccchhHHHHHHhccccccccccccee
Q psy14842        753 IQRVFIKTEMTLKSKSVL-------SGSRQLVRSKSNENLPTSQSQHNIQMMSHTLTIRELFTLWSWLPVRITMYQPVLL  825 (858)
Q Consensus       753 i~~~~~~~~~~~~~k~v~-------~~~~q~~r~~~~~~~p~~~~qini~~~S~ILt~~e~~~IwsWLP~r~~l~~P~Ll  825 (858)
                      |+.+|++||+++|+|||.       -..||+++..+..          .++.|+|++.+||++||+|+|+||++|||.|+
T Consensus       300 iqllqmanekalkqkgitvkqksvslskrqfvhlavha----------enfrseivsvremrdiwswvperfalcqplll  369 (559)
T KOG2801|consen  300 IQLLQMANEKALKQKGITVKQKSVSLSKRQFVHLAVHA----------ENFRSEIVSVREMRDIWSWVPERFALCQPLLL  369 (559)
T ss_pred             HHHHHHhhHHHHHhcCceeeeeeechhhhhhhhhhhhH----------hhhhhhhhhHHHHhhHHHhhhHHHhhhhHHHH
Confidence            999999999999998876       2356777777654          48999999999999999999999999999999


Q ss_pred             eecccccchHHHHHHhhcCCCcEEEEEEcCCCC
Q psy14842        826 YTTEEHGCSLTTFYYRVEQHEPTLLMIKTTNNE  858 (858)
Q Consensus       826 fsT~~hG~SL~~fy~~~e~~ePtlLlIKT~~~e  858 (858)
                      ||+.+|||||.+||-+||+||||+|+|||..+|
T Consensus       370 fsslqhgyslarfyfqcegheptllliktmqke  402 (559)
T KOG2801|consen  370 FSSLQHGYSLARFYFQCEGHEPTLLLIKTMQKE  402 (559)
T ss_pred             HHHhhcchhhhhheeeccCCCCeeehHHHHHHH
Confidence            999999999999999999999999999998754

>KOG2058|consensus Back     alignment and domain information
>KOG4347|consensus Back     alignment and domain information
>smart00164 TBC Domain in Tre-2, BUB2p, and Cdc16p Back     alignment and domain information
>KOG2222|consensus Back     alignment and domain information
>COG5210 GTPase-activating protein [General function prediction only] Back     alignment and domain information
>PF00566 RabGAP-TBC: Rab-GTPase-TBC domain; InterPro: IPR000195 Identification of a TBC domain in GYP6_YEAST and GYP7_YEAST, which are GTPase activator proteins of yeast Ypt6 and Ypt7, imply that these domains are GTPase activator proteins of Rab-like small GTPases [] Back     alignment and domain information
>KOG2223|consensus Back     alignment and domain information
>KOG4436|consensus Back     alignment and domain information
>KOG1092|consensus Back     alignment and domain information
>KOG1102|consensus Back     alignment and domain information
>KOG4567|consensus Back     alignment and domain information
>KOG1093|consensus Back     alignment and domain information
>KOG2221|consensus Back     alignment and domain information
>KOG2224|consensus Back     alignment and domain information
>KOG4436|consensus Back     alignment and domain information
>KOG2197|consensus Back     alignment and domain information
>KOG2595|consensus Back     alignment and domain information
>smart00584 TLDc domain in TBC and LysM domain containing proteins Back     alignment and domain information
>KOG1091|consensus Back     alignment and domain information
>PF08395 7tm_7: 7tm Chemosensory receptor; InterPro: IPR013604 This family includes a number of gustatory and odorant receptors mainly from insect species such as Anopheles gambiae (African malaria mosquito) and Drosophila melanogaster (Fruit fly) Back     alignment and domain information
>KOG2801|consensus Back     alignment and domain information
>KOG2372|consensus Back     alignment and domain information
>KOG3636|consensus Back     alignment and domain information
>COG5142 OXR1 Oxidation resistance protein [DNA replication, recombination, and repair] Back     alignment and domain information
>KOG2058|consensus Back     alignment and domain information
>KOG1102|consensus Back     alignment and domain information
>KOG2223|consensus Back     alignment and domain information
>KOG4347|consensus Back     alignment and domain information
>PF00566 RabGAP-TBC: Rab-GTPase-TBC domain; InterPro: IPR000195 Identification of a TBC domain in GYP6_YEAST and GYP7_YEAST, which are GTPase activator proteins of yeast Ypt6 and Ypt7, imply that these domains are GTPase activator proteins of Rab-like small GTPases [] Back     alignment and domain information
>COG5210 GTPase-activating protein [General function prediction only] Back     alignment and domain information
>PF14961 BROMI: Broad-minded protein Back     alignment and domain information
>KOG2222|consensus Back     alignment and domain information
>KOG4636|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query858
2qq8_A334 TBC1 domain family member 14; structural genomics 9e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
4acj_A 167 WU\:FB25H12 protein,; immune system; 0.97A {Danio 2e-09
3qye_A331 TBC1 domain family member 1; rabgap, RAB, myocytes 5e-09
3hzj_A310 Rabgap1L, RAB GTPase-activating protein 1-like; st 6e-09
3qwl_A294 TBC1 domain family member 7; RAB GTPase activation 6e-06
>2qq8_A TBC1 domain family member 14; structural genomics consortium, RAB-GAP, SGC, GTPase activation, hydrolase activator; 2.00A {Homo sapiens} Length = 334 Back     alignment and structure
 Score = 66.4 bits (162), Expect = 9e-12
 Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 14/134 (10%)

Query: 445 PDITYSPAIYPIAAMLLHFMSEEECYNSLTSLV-SCKHRTFVTQTKLLYEVTWRTVMHIS 503
           PD+ Y   +  IAA+L+  +   + + + ++L+       F      L    +       
Sbjct: 149 PDVGYVQGMSFIAAVLILNLDTADAFIAFSNLLNKPCQMAFFRVDHGLMLTYFAAFEVFF 208

Query: 504 KKHVKSAAAHLTRHRQGSRVERIYMDWMW--WILQ----GLPFNHLVRVLDCYLHEGIKV 557
           ++++    AH  ++        +  D     WI       LP +   R+ D +  +G + 
Sbjct: 209 EENLPKLFAHFKKNN-------LTPDIYLIDWIFTLYSKSLPLDLACRIWDVFCRDGEEF 261

Query: 558 LYRVAMAILLLFHK 571
           L+R A+ IL LF  
Sbjct: 262 LFRTALGILKLFED 275
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>4acj_A WU\:FB25H12 protein,; immune system; 0.97A {Danio rerio} Length = 167 Back     alignment and structure
>3qye_A TBC1 domain family member 1; rabgap, RAB, myocytes, hydrolase activator; 2.20A {Homo sapiens} PDB: 3qyb_A Length = 331 Back     alignment and structure
>3hzj_A Rabgap1L, RAB GTPase-activating protein 1-like; structural genomics consortium, SGC, alternative splicing, GTPase activation, phosphoprotein; 2.30A {Homo sapiens} Length = 310 Back     alignment and structure
>3qwl_A TBC1 domain family member 7; RAB GTPase activation, structural genomics consortium, TBC D SGC, hydrolase activator; 1.90A {Homo sapiens} Length = 294 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query858
3hzj_A310 Rabgap1L, RAB GTPase-activating protein 1-like; st 100.0
3qye_A331 TBC1 domain family member 1; rabgap, RAB, myocytes 100.0
2qq8_A334 TBC1 domain family member 14; structural genomics 100.0
4hl4_A292 TBC1 domain family member 20; rabgap, RAB1B, hydro 99.98
2qfz_A345 TBC1 domain family member 22A; RAB-GAP, GTPase act 99.97
1fkm_A396 Protein (GYP1P), ORF YOR070C; GAP, YPT/RAB protein 99.97
3qwl_A294 TBC1 domain family member 7; RAB GTPase activation 99.9
4acj_A 167 WU\:FB25H12 protein,; immune system; 0.97A {Danio 99.15
2qq8_A334 TBC1 domain family member 14; structural genomics 98.37
3hzj_A310 Rabgap1L, RAB GTPase-activating protein 1-like; st 98.19
3qye_A331 TBC1 domain family member 1; rabgap, RAB, myocytes 98.09
3qwl_A294 TBC1 domain family member 7; RAB GTPase activation 97.56
4hl4_A292 TBC1 domain family member 20; rabgap, RAB1B, hydro 97.48
2qfz_A345 TBC1 domain family member 22A; RAB-GAP, GTPase act 97.2
1fkm_A396 Protein (GYP1P), ORF YOR070C; GAP, YPT/RAB protein 96.92
>3hzj_A Rabgap1L, RAB GTPase-activating protein 1-like; structural genomics consortium, SGC, alternative splicing, GTPase activation, phosphoprotein; 2.30A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=1.6e-37  Score=328.60  Aligned_cols=254  Identities=14%  Similarity=0.202  Sum_probs=201.8

Q ss_pred             HHhHhhhCccccccccchhhHhHHHHHh--ccCccccccccCCcCCCCCcc--cCCCCCCC---CC--CchhHHHHHHHH
Q psy14842        367 LMDLEKYNIQFTAHGFFSLEYSLFRKAL--VMDNSKFLELPEKPIMLPPFV--DSAHRLPY---HL--TRKGRSVTDRVV  437 (858)
Q Consensus       367 l~~l~k~gi~~~~~gY~~ie~sLrgq~l--~~~pg~Y~eLl~ks~~lPefi--D~~rt~~y---~l--n~~Gq~sLrRIL  437 (858)
                      ++++.+.|||   ..+|+..|.......  ...++.|.++.++..+..+.+  |..|+.+.   +.  ++.|+++|+|||
T Consensus        26 l~~l~~~GIP---~~lR~~vW~~llg~~~~~~~~~~Y~~l~~~~~~~~~~I~~Dv~Rt~p~~~~f~~~~~~~~~~L~~IL  102 (310)
T 3hzj_A           26 LSTLVKSGVP---EALRAEVWQLLAGCHDNQAMLDRYRILITKDSAQESVITRDIHRTFPAHDYFKDTGGDGQESLYKIC  102 (310)
T ss_dssp             HHHHHHHCCC---GGGHHHHHHHHTTCCCCHHHHHHHHHHTTSCCTTHHHHHHHHTTSSTTSTTTSSTTSHHHHHHHHHH
T ss_pred             HHHHHHCCCC---HHHHHHHHHHHHCCCcchhHHHHHHHHHhccCCcHHHHHHHHHhhCCCchhhcCCCchhHHHHHHHH
Confidence            4556667773   334444444332211  123567988887765544444  56676443   33  347899999999


Q ss_pred             hHHhhcCCCCcccCChhHHHHHHHhhcChhHHHHHHHHhhhcc-ccCcccccHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q psy14842        438 CVLGFACPDITYSPAIYPIAAMLLHFMSEEECYNSLTSLVSCK-HRTFVTQTKLLYEVTWRTVMHISKKHVKSAAAHLTR  516 (858)
Q Consensus       438 ~AYS~~nPdIGYCQGMN~IAAlLLlymdEEdAFW~Lv~LLe~~-~~~Yf~qs~~~l~~~~~tfe~LLkk~lPkL~~HL~k  516 (858)
                      .||+.+||++|||||||+|||+||++++|++||||++++|++. .+++|.+++.++...+.+++.++++++|++++|+++
T Consensus       103 ~ay~~~~p~igY~QGm~~iaa~lL~~~~e~~aF~~l~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~p~L~~hL~~  182 (310)
T 3hzj_A          103 KAYSVYDEDIGYCQGQSFLAAVLLLHMPEEQAFCVLVKIMYDYGLRDLYRNNFEDLHCKFYQLERLMQEQLPDLHSHFSD  182 (310)
T ss_dssp             HHHHHHCTTTCSCTTHHHHHHHHHHHSCHHHHHHHHHHHHHTSCGGGGTHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             HHHHHHCCCCCccCCHHHHHHHHHHhCCHHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHHHHHHhChHHHHHHHH
Confidence            9999999999999999999999999999999999999999987 688899999999999999999999999999999999


Q ss_pred             hcCCCChhHhhHHHHHHccC-CCCchhhHHHHHHHHhcCchHHHHHHHHHHHHhhhhccCCCchhhhhcchhHHHHHHH-
Q psy14842        517 HRQGSRVERIYMDWMWWILQ-GLPFNHLVRVLDCYLHEGIKVLYRVAMAILLLFHKFSSSHNSDWMREISDHGIEAALS-  594 (858)
Q Consensus       517 l~~Gidi~~~~s~WFLTLFs-~LPfe~vLRIWD~FLlEG~KVLfRVALAILKl~ek~Lls~~sewLl~l~~edv~~~L~-  594 (858)
                      .  |+++..++.+||+|+|+ ++|++.++||||+|+.||.++++++|+|+++.+++++        .+.+.+++...++ 
T Consensus       183 ~--~i~~~~~~~~W~ltlF~~~lp~~~~~riwD~~l~~g~~~l~~v~lail~~~~~~L--------l~~d~~~~l~~l~~  252 (310)
T 3hzj_A          183 L--NLEAHMYASQWFLTLFTAKFPLCMVFHIIDLLLCEGLNIIFHVALALLKTSKEDL--------LQADFEGALKFFRV  252 (310)
T ss_dssp             H--TCCGGGTSHHHHHHTTTTTSCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTHHHH--------HTCCHHHHHHHHHT
T ss_pred             c--CCChHHHHHHHHHHHHhccCCHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHH--------HcCCHHHHHHHHHH
Confidence            7  57777788999999997 9999999999999999999999999999999999985        3334444444443 


Q ss_pred             HhhhhCC--CCHHHHHHHHHccCCCChhHHHHHHHHHHhhhh
Q psy14842        595 KFCRQMP--VSPRKVLKVAFGIRALGSTYIQRVFIKTEMTLK  634 (858)
Q Consensus       595 ~F~KnIp--iDpDkLLk~AFsIr~LSrtyIqRvRlK~EmaLK  634 (858)
                      .+++...  .|++.+++.|++++ ++++.|++.+.+++..-+
T Consensus       253 ~lp~~~~~~~d~~~ll~~A~~l~-~~~~~l~~~~~ey~~~~~  293 (310)
T 3hzj_A          253 QLPKRYRAEENARRLMEQACNIK-VPTKKLKKYEKEYQTMRE  293 (310)
T ss_dssp             HHHHTTCSHHHHHHHHHHHHHSC-CCHHHHHHHHHHHHHHC-
T ss_pred             hCcccccccccHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHH
Confidence            2333222  57899999999998 788999999999986333
>3qye_A TBC1 domain family member 1; rabgap, RAB, myocytes, hydrolase activator; 2.20A {Homo sapiens} PDB: 3qyb_A Back     alignment and structure
>2qq8_A TBC1 domain family member 14; structural genomics consortium, RAB-GAP, SGC, GTPase activation, hydrolase activator; 2.00A {Homo sapiens} Back     alignment and structure
>4hl4_A TBC1 domain family member 20; rabgap, RAB1B, hydrolase activator, catalytic domain, F GTPase-activating proteins, RAB GTP-binding protein, GTP HY; 2.20A {Homo sapiens} PDB: 4hlq_A* Back     alignment and structure
>2qfz_A TBC1 domain family member 22A; RAB-GAP, GTPase activator, structural genomics, structural genomics consortium, SGC, hydrolase activator; 2.10A {Homo sapiens} PDB: 3dzx_A Back     alignment and structure
>1fkm_A Protein (GYP1P), ORF YOR070C; GAP, YPT/RAB protein, vesicular trafficking, endocytosis, hydrolase, GTPase activation; 1.90A {Saccharomyces cerevisiae} SCOP: a.69.2.1 a.69.2.1 PDB: 2g77_A* Back     alignment and structure
>3qwl_A TBC1 domain family member 7; RAB GTPase activation, structural genomics consortium, TBC D SGC, hydrolase activator; 1.90A {Homo sapiens} Back     alignment and structure
>4acj_A WU\:FB25H12 protein,; immune system; 0.97A {Danio rerio} Back     alignment and structure
>2qq8_A TBC1 domain family member 14; structural genomics consortium, RAB-GAP, SGC, GTPase activation, hydrolase activator; 2.00A {Homo sapiens} Back     alignment and structure
>3hzj_A Rabgap1L, RAB GTPase-activating protein 1-like; structural genomics consortium, SGC, alternative splicing, GTPase activation, phosphoprotein; 2.30A {Homo sapiens} Back     alignment and structure
>3qye_A TBC1 domain family member 1; rabgap, RAB, myocytes, hydrolase activator; 2.20A {Homo sapiens} PDB: 3qyb_A Back     alignment and structure
>3qwl_A TBC1 domain family member 7; RAB GTPase activation, structural genomics consortium, TBC D SGC, hydrolase activator; 1.90A {Homo sapiens} Back     alignment and structure
>4hl4_A TBC1 domain family member 20; rabgap, RAB1B, hydrolase activator, catalytic domain, F GTPase-activating proteins, RAB GTP-binding protein, GTP HY; 2.20A {Homo sapiens} PDB: 4hlq_A* Back     alignment and structure
>2qfz_A TBC1 domain family member 22A; RAB-GAP, GTPase activator, structural genomics, structural genomics consortium, SGC, hydrolase activator; 2.10A {Homo sapiens} PDB: 3dzx_A Back     alignment and structure
>1fkm_A Protein (GYP1P), ORF YOR070C; GAP, YPT/RAB protein, vesicular trafficking, endocytosis, hydrolase, GTPase activation; 1.90A {Saccharomyces cerevisiae} SCOP: a.69.2.1 a.69.2.1 PDB: 2g77_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query858
d1fkma1194 Ypt/Rab-GAP domain of gyp1p {Baker's yeast (Saccha 99.6
d1fkma2188 Ypt/Rab-GAP domain of gyp1p {Baker's yeast (Saccha 99.29
d1fkma2188 Ypt/Rab-GAP domain of gyp1p {Baker's yeast (Saccha 82.54
>d1fkma1 a.69.2.1 (A:249-442) Ypt/Rab-GAP domain of gyp1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: All alpha proteins
fold: Left-handed superhelix
superfamily: Ypt/Rab-GAP domain of gyp1p
family: Ypt/Rab-GAP domain of gyp1p
domain: Ypt/Rab-GAP domain of gyp1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.60  E-value=4.3e-16  Score=152.61  Aligned_cols=69  Identities=14%  Similarity=0.239  Sum_probs=59.2

Q ss_pred             cCCCCCC---CCCCchhHHHHHHHHhHHhhcCCCCcccCChhHHHHHHHhhc----------------------------
Q psy14842        416 DSAHRLP---YHLTRKGRSVTDRVVCVLGFACPDITYSPAIYPIAAMLLHFM----------------------------  464 (858)
Q Consensus       416 D~~rt~~---y~ln~~Gq~sLrRIL~AYS~~nPdIGYCQGMN~IAAlLLlym----------------------------  464 (858)
                      |..||.+   ++.++.+++.|+|||.|||.+||++|||||||+|||++|.++                            
T Consensus        92 Dv~RT~~~~~~f~~~~~~~~L~rIL~~ya~~np~~gY~QGmn~i~a~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (194)
T d1fkma1          92 DIPRTNPHIPLYQFKSVQNSLQRILYLWAIRHPASGYVQGINDLVTPFFETFLTEYLPPSQIDDVEIKDPSTYMVDEQIT  171 (194)
T ss_dssp             HGGGSSTTSGGGGSHHHHHHHHHHHHHHHHHCTTTCSCTTHHHHHHHHHHHHHGGGSCGGGGGGTTTSCGGGTCCHHHHH
T ss_pred             HHHhcCCcccccccchhHHHHHHHHHHHHHHCCCCCeeecchHHHHHHHHHHhhhhhhhhhhhhhhhcchhhhhhhhhhh
Confidence            5667744   345789999999999999999999999999999999999754                            


Q ss_pred             -ChhHHHHHHHHhhhccccCc
Q psy14842        465 -SEEECYNSLTSLVSCKHRTF  484 (858)
Q Consensus       465 -dEEdAFW~Lv~LLe~~~~~Y  484 (858)
                       .|+||||||+++|++..++|
T Consensus       172 ~~Ead~F~~f~~lm~~i~d~y  192 (194)
T d1fkma1         172 DLEADTFWCLTKLLEQITDNY  192 (194)
T ss_dssp             HHHHHHHHHHHHHHGGGGGGS
T ss_pred             hHHHHHHHHHHHHHHhhhccC
Confidence             28899999999999876554
>d1fkma2 a.69.2.1 (A:443-630) Ypt/Rab-GAP domain of gyp1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1fkma2 a.69.2.1 (A:443-630) Ypt/Rab-GAP domain of gyp1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure