Psyllid ID: psy1485

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250--
Protein Sequence
MTNGVAESALRDLKRNQQQQQLNNQNNNNNNNKSTLIIHSVQRVDLIRSACQVYLMVFVLNDHCSSVGPLREGSARSSLSEASGVSGASTRTYFNEASTLVLETLENGVKKHYLIPLSLAQKNRWSKKGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHSTIQHLELNKDRIELRQQNRWSKKGTKLHIFNDHTFIAKHLPGTLYTNSPFYFRRDSIRKRK
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccEEccccccHHHHHcccccccccccccccccccccccccccEEEcccEEEEEEcccccccccccccccccccccEEEccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEHEccHHHccccccccccccccccccEEEEEcccEEEEcccccEEEEEEEEEccccccccccccccccccccccccccccccccEEccccEEEEEEcccccEEEEEEcHHHHcccHHHHcccEEEEEcccEEEEEEcccccEHHHHHHHHHHHccccccEEEEEEEEEEccHcEEEcccccccccccccccHcccccccccEEEEccccccccccccEEHHcccccEccccccEEEHHHHHHcc
Coil and Loop (DISEMBL)
MTNGVAESALRDLKRNQQQQQLNnqnnnnnnnksTLIIHSVQRVDLIRSACQVYLMVFVLNdhcssvgplregsarsslseasgvsgastrtyFNEASTLVLETLENGVKKHYLIPLSLaqknrwskkgtklhiFNDHTFiakhlpggtvcqmcCKPLarrlgkqgyecrdchvkchkqchvrtettcphstiqHLELNKDRIELRQqnrwskkgtklhiFNDHTFiakhlpgtlytnspfyfrrdsirkrk
Flexible Loop (DISEMBL)
mtngvaesALRDLKRNQQQQQlnnqnnnnnnnkSTLIIHSVQRVDLIRSACQVYLMVFVLNDHCSSVGPLRegsarsslseasgvsgastrtYFNEASTLVLETLENGVKKHYLIPLSLAQKNRWSKKGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVrtettcphstiqhlELNKDRIELRQQNRWSKKGTKLHIFNDHTFIakhlpgtlytnspfyfrrdsirkrk
Low Complexity Region (SEG)
MTNGVAESALRDLKRnqqqqqlnnqnnnnnnnKSTLIIHSVQRVDLIRSACQVYLMVFVLNDHCSSVGPLREGSARSSLSEASGVSGASTRTYFNEASTLVLETLENGVKKHYLIPLSLAQKNRWSKKGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHSTIQHLELNKDRIELRQQNRWSKKGTKLHIFNDHTFIAKHLPGTLYTNSPFYFRRDSIRKRK
Disordered region (IsUnstruct)
***********************************LIIHSVQRVDLIRSACQVYLMVFVLNDHCSSV************************TYFNEASTLVLETLENGVKKHYLIPLSLAQKNRWSKKGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHSTIQHLELNKDRIELRQQNRWSKKGTKLHIFNDHTFIAKHLPGTLYTNSPFYFR********
Disordered Region (DISOPRED)
************************************************************************************************************************************HIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETT**************************KGTKLHIFNDHTFIAKHLPGTLY****************
Disordered Region (DISEMBL)
*********LRDLKRNQQQQQLNNQNNNNNNNKSTLIIHSVQRVDLIRSACQVYLMVFVLNDHCSSVG*******************ASTRTYFNEASTLVLETLENGVKKHYLIPLSLAQKNRWSKKGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHSTIQHLELNKDRIELRQQNRWSKKGTKLHIFNDHTFIAKHLPGTLYTNSPFYFRRDSIRKRK
Disordered Region (DISPRO)
****VAESALRDLKRNQQQQQLNNQNNNNNNNKSTLIIHSVQRVDLIRSACQVYLMVFVLNDHC**************************RTYFNEASTLVLETLENGVKKHYLIPLSLAQKNRWSKKGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHSTIQHLELNKDRIELRQQNRWSKKGTKLHIFNDHTFIAKHLPGTLYTNSPFYFRRDSIRKR*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MTNGVAESAxxxxxxxxxxxxxxxxxxxxxxxxxxLIIHSVQRVDLIRSACQVYLMVFVLNDHCSSVGPLREGSARSSLSEASGVSGASTRTYFNEASTLVLETLENGVKKHYLIPLSLAQKNRWSKKGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHSTIQHLELNKDRIELRQQNRWSKKGTKLHIFNDHTFIAKHLPGTLYTNSPFYFRRDSIRKRK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	252	2.2.26 [Sep-21-2011]
Q16975	743	Calcium-independent prote	N/A	N/A	0.365	0.123	0.319	1e-05
Q02111	707	Protein kinase C theta ty	yes	N/A	0.396	0.141	0.310	2e-05
P34885	707	Protein kinase C-like 1B	no	N/A	0.369	0.131	0.333	2e-05
P17252	672	Protein kinase C alpha ty	no	N/A	0.369	0.138	0.287	3e-05
Q04759	706	Protein kinase C theta ty	no	N/A	0.396	0.141	0.310	3e-05
P05696	672	Protein kinase C alpha ty	no	N/A	0.369	0.138	0.287	3e-05
P10102	672	Protein kinase C alpha ty	yes	N/A	0.369	0.138	0.287	3e-05
P20444	672	Protein kinase C alpha ty	no	N/A	0.369	0.138	0.287	3e-05
Q9WTQ0	707	Protein kinase C theta ty	yes	N/A	0.396	0.141	0.310	4e-05
P90980	682	Protein kinase C-like 2 O	no	N/A	0.345	0.127	0.301	5e-05

>sp|Q16975|KPC2_APLCA Calcium-independent protein kinase C OS=Aplysia californica GN=PRKC2 PE=1 SV=1

 Score = 50.4 bits (119), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 2/94 (2%)

Query: 132 LHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHS 191
           +H  N H F+A      T C +C +     LGKQGY+C+ C    HK+CH    T CP S
Sbjct: 171 VHQVNGHKFMAMFFRQPTFCSLC-RDFIWGLGKQGYQCQVCTCVVHKRCHQHIVTKCPGS 229

Query: 192 -TIQHLELNKDRIELRQQNRWSKKGTKLHIFNDH 224
             + + E+   R  +   +R++    +   F DH
Sbjct: 230 RDVANDEVTGKRFNINVPHRFNVHNYRRPTFCDH 263

PKC is activated by diacylglycerol which in turn phosphorylates a range of cellular proteins. PKC also serves as the receptor for phorbol esters, a class of tumor promoters.
Aplysia californica (taxid: 6500)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1EC: 3

>sp|Q02111|KPCT_MOUSE Protein kinase C theta type OS=Mus musculus GN=Prkcq PE=1 SV=1

 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 3/103 (2%)

Query: 124 RWSKKGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVR 183
           R + K  K+H    H F A   P  T C +C       L KQGY+CR C+   HK+C  +
Sbjct: 146 RGAIKQAKVHHVKCHEFTATFFPQPTFCSVC-HEFVWGLNKQGYQCRQCNAAIHKKCIDK 204

Query: 184 TETTCPHSTIQHLE--LNKDRIELRQQNRWSKKGTKLHIFNDH 224
               C  S I   E   +K+R ++   +R+     K   F +H
Sbjct: 205 VIAKCTGSAINSRETMFHKERFKIDMPHRFKVYNYKSPTFCEH 247

Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that mediates non-redundant functions in T-cell receptor (TCR) signaling, including T-cells activation, proliferation, differentiation and survival, by mediating activation of multiple transcription factors such as NF-kappa-B, JUN, NFATC1 and NFATC2. In TCR-CD3/CD28-co-stimulated T-cells, is required for the activation of NF-kappa-B and JUN, which in turn are essential for IL2 production, and participates to the calcium-dependent NFATC1 and NFATC2 transactivation. Mediates the activation of the canonical NF-kappa-B pathway (NFKB1) by direct phosphorylation of CARD11 on several serine residues, inducing CARD11 association with lipid rafts and recruitment of the BCL10-MALT1 complex, which then activates IKK complex, resulting in nuclear translocation and activation of NFKB1. May also play an indirect role in activation of the non-canonical NF-kappa-B (NFKB2) pathway. In the signaling pathway leading to JUN activation, acts by phosphorylating the mediator STK39/SPAK and may not act through MAP kinases signaling. Plays a critical role in TCR/CD28-induced NFATC1 and NFATC2 transactivation by participating in the regulation of reduced inositol 1,4,5-trisphosphate generation and intracellular calcium mobilization. After costimulation of T-cells through CD28 can phosphorylate CBLB and is required for the ubiquitination and subsequent degradation of CBLB, which is a prerequisite for the activation of TCR. During T-cells differentiation, plays an important role in the development of T-helper 2 (Th2) cells following immune and inflammatory responses, and, in the development of inflammatory autoimmune diseases, is necessary for the activation of IL17-producing Th17 cells. May play a minor role in Th1 response. Upon TCR stimulation, mediates T-cell protective survival signal by phosphorylating BAD, thus protecting T-cells from BAD-induced apoptosis, and by up-regulating BCL-X(L)/BCL2L1 levels through NF-kappa-B and JUN pathways. In platelets, regulates signal transduction downstream of the ITGA2B, CD36/GP4, F2R/PAR1 and F2RL3/PAR4 receptors, playing a positive role in 'outside-in' signaling and granule secretion signal transduction. May relay signals from the activated ITGA2B receptor by regulating the uncoupling of WASP and WIPF1, thereby permitting the regulation of actin filament nucleation and branching activity of the Arp2/3 complex. May mediate inhibitory effects of free fatty acids on insulin signaling by phosphorylating IRS1, which in turn blocks IRS1 tyrosine phosphorylation and downstream activation of the PI3K/AKT pathway. Phosphorylates MSN (moesin) in the presence of phosphatidylglycerol or phosphatidylinositol. Phosphorylates PDPK1 at 'Ser-504' and 'Ser-532' and negatively regulates its ability to phosphorylate PKB/AKT1.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P34885|KPC1B_CAEEL Protein kinase C-like 1B OS=Caenorhabditis elegans GN=pkc-1 PE=2 SV=2

 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 46/102 (45%), Gaps = 9/102 (8%)

Query: 131 KLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPH 190
           K+H    H F+A  L   T C  C K     +GKQGY+C+ C V  HK+CH      CP 
Sbjct: 164 KIHEVTGHKFMALFLRQPTFCAHC-KEFIWGIGKQGYQCQICTVVVHKRCHEDVVWKCPG 222

Query: 191 STIQHL-ELNKD-------RIELRQQNRWSKKGTKLHIFNDH 224
           +    + EL K+       R  +   +R+S    K   F DH
Sbjct: 223 NKADAVEELGKEIQETGAGRFNINMPHRFSVHSYKRPTFCDH 264

PKC is activated by diacylglycerol which in turn phosphorylates a range of cellular proteins. PKC also serves as the receptor for phorbol esters, a class of tumor promoters.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P17252|KPCA_HUMAN Protein kinase C alpha type OS=Homo sapiens GN=PRKCA PE=1 SV=4

 Score = 49.3 bits (116), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 15/108 (13%)

Query: 123 NRWSKKGT----KLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHK 178
           NR+++KG      +H   DH FIA+     T C  C        GKQG++C+ C    HK
Sbjct: 18  NRFARKGALRQKNVHEVKDHKFIARFFKQPTFCSHCTD-FIWGFGKQGFQCQVCCFVVHK 76

Query: 179 QCHVRTETTCPHSTIQHLELNKDRIELRQQNRWSKKGTKLHIFNDHTF 226
           +CH     +CP +     +   D  + R ++++     K+H +   TF
Sbjct: 77  RCHEFVTFSCPGA-----DKGPDTDDPRSKHKF-----KIHTYGSPTF 114

Calcium-activated, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that is involved in positive and negative regulation of cell proliferation, apoptosis, differentiation, migration and adhesion, tumorigenesis, cardiac hypertrophy, angiogenesis, platelet function and inflammation, by directly phosphorylating targets such as RAF1, BCL2, CSPG4, TNNT2/CTNT, or activating signaling cascade involving MAPK1/3 (ERK1/2) and RAP1GAP. Involved in cell proliferation and cell growth arrest by positive and negative regulation of the cell cycle. Can promote cell growth by phosphorylating and activating RAF1, which mediates the activation of the MAPK/ERK signaling cascade, and/or by up-regulating CDKN1A, which facilitates active cyclin-dependent kinase (CDK) complex formation in glioma cells. In intestinal cells stimulated by the phorbol ester PMA, can trigger a cell cycle arrest program which is associated with the accumulation of the hyper-phosphorylated growth-suppressive form of RB1 and induction of the CDK inhibitors CDKN1A and CDKN1B. Exhibits anti-apoptotic function in glioma cells and protects them from apoptosis by suppressing the p53/TP53-mediated activation of IGFBP3, and in leukemia cells mediates anti-apoptotic action by phosphorylating BCL2. During macrophage differentiation induced by macrophage colony-stimulating factor (CSF1), is translocated to the nucleus and is associated with macrophage development. After wounding, translocates from focal contacts to lamellipodia and participates in the modulation of desmosomal adhesion. Plays a role in cell motility by phosphorylating CSPG4, which induces association of CSPG4 with extensive lamellipodia at the cell periphery and polarization of the cell accompanied by increases in cell motility. Is highly expressed in a number of cancer cells where it can act as a tumor promoter and is implicated in malignant phenotypes of several tumors such as gliomas and breast cancers. Negatively regulates myocardial contractility and positively regulates angiogenesis, platelet aggregation and thrombus formation in arteries. Mediates hypertrophic growth of neonatal cardiomyocytes, in part through a MAPK1/3 (ERK1/2)-dependent signaling pathway, and upon PMA treatment, is required to induce cardiomyocyte hypertrophy up to heart failure and death, by increasing protein synthesis, protein-DNA ratio and cell surface area. Regulates cardiomyocyte function by phosphorylating cardiac troponin T (TNNT2/CTNT), which induces significant reduction in actomyosin ATPase activity, myofilament calcium sensitivity and myocardial contractility. In angiogenesis, is required for full endothelial cell migration, adhesion to vitronectin (VTN), and vascular endothelial growth factor A (VEGFA)-dependent regulation of kinase activation and vascular tube formation. Involved in the stabilization of VEGFA mRNA at post-transcriptional level and mediates VEGFA-induced cell proliferation. In the regulation of calcium-induced platelet aggregation, mediates signals from the CD36/GP4 receptor for granule release, and activates the integrin heterodimer ITGA2B-ITGB3 through the RAP1GAP pathway for adhesion. During response to lipopolysaccharides (LPS), may regulate selective LPS-induced macrophage functions involved in host defense and inflammation. But in some inflammatory responses, may negatively regulate NF-kappa-B-induced genes, through IL1A-dependent induction of NF-kappa-B inhibitor alpha (NFKBIA/IKBA). Upon stimulation with 12-O-tetradecanoylphorbol-13-acetate (TPA), phosphorylates EIF4G1, which modulates EIF4G1 binding to MKNK1 and may be involved in the regulation of EIF4E phosphorylation. Phosphorylates KIT, leading to inhibition of KIT activity.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q04759|KPCT_HUMAN Protein kinase C theta type OS=Homo sapiens GN=PRKCQ PE=1 SV=3

 Score = 49.3 bits (116), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 3/103 (2%)

Query: 124 RWSKKGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVR 183
           R + K  K+H    H F A   P  T C +C       L KQGY+CR C+   HK+C  +
Sbjct: 146 RGAIKQAKVHHVKCHEFTATFFPQPTFCSVC-HEFVWGLNKQGYQCRQCNAAIHKKCIDK 204

Query: 184 TETTCPHSTIQHLE--LNKDRIELRQQNRWSKKGTKLHIFNDH 224
               C  S I   E   +K+R ++   +R+     K   F +H
Sbjct: 205 VIAKCTGSAINSRETMFHKERFKIDMPHRFKVYNYKSPTFCEH 247

Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that mediates non-redundant functions in T-cell receptor (TCR) signaling, including T-cells activation, proliferation, differentiation and survival, by mediating activation of multiple transcription factors such as NF-kappa-B, JUN, NFATC1 and NFATC2. In TCR-CD3/CD28-co-stimulated T-cells, is required for the activation of NF-kappa-B and JUN, which in turn are essential for IL2 production, and participates to the calcium-dependent NFATC1 and NFATC2 transactivation. Mediates the activation of the canonical NF-kappa-B pathway (NFKB1) by direct phosphorylation of CARD11 on several serine residues, inducing CARD11 association with lipid rafts and recruitment of the BCL10-MALT1 complex, which then activates IKK complex, resulting in nuclear translocation and activation of NFKB1. May also play an indirect role in activation of the non-canonical NF-kappa-B (NFKB2) pathway. In the signaling pathway leading to JUN activation, acts by phosphorylating the mediator STK39/SPAK and may not act through MAP kinases signaling. Plays a critical role in TCR/CD28-induced NFATC1 and NFATC2 transactivation by participating in the regulation of reduced inositol 1,4,5-trisphosphate generation and intracellular calcium mobilization. After costimulation of T-cells through CD28 can phosphorylate CBLB and is required for the ubiquitination and subsequent degradation of CBLB, which is a prerequisite for the activation of TCR. During T-cells differentiation, plays an important role in the development of T-helper 2 (Th2) cells following immune and inflammatory responses, and, in the development of inflammatory autoimmune diseases, is necessary for the activation of IL17-producing Th17 cells. May play a minor role in Th1 response. Upon TCR stimulation, mediates T-cell protective survival signal by phosphorylating BAD, thus protecting T-cells from BAD-induced apoptosis, and by up-regulating BCL-X(L)/BCL2L1 levels through NF-kappa-B and JUN pathways. In platelets, regulates signal transduction downstream of the ITGA2B, CD36/GP4, F2R/PAR1 and F2RL3/PAR4 receptors, playing a positive role in 'outside-in' signaling and granule secretion signal transduction. May relay signals from the activated ITGA2B receptor by regulating the uncoupling of WASP and WIPF1, thereby permitting the regulation of actin filament nucleation and branching activity of the Arp2/3 complex. May mediate inhibitory effects of free fatty acids on insulin signaling by phosphorylating IRS1, which in turn blocks IRS1 tyrosine phosphorylation and downstream activation of the PI3K/AKT pathway. Phosphorylates MSN (moesin) in the presence of phosphatidylglycerol or phosphatidylinositol. Phosphorylates PDPK1 at 'Ser-504' and 'Ser-532' and negatively regulates its ability to phosphorylate PKB/AKT1.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P05696|KPCA_RAT Protein kinase C alpha type OS=Rattus norvegicus GN=Prkca PE=1 SV=3

 Score = 49.3 bits (116), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 15/108 (13%)

Query: 123 NRWSKKGT----KLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHK 178
           NR+++KG      +H   DH FIA+     T C  C        GKQG++C+ C    HK
Sbjct: 18  NRFARKGALRQKNVHEVKDHKFIARFFKQPTFCSHCTD-FIWGFGKQGFQCQVCCFVVHK 76

Query: 179 QCHVRTETTCPHSTIQHLELNKDRIELRQQNRWSKKGTKLHIFNDHTF 226
           +CH     +CP +     +   D  + R ++++     K+H +   TF
Sbjct: 77  RCHEFVTFSCPGA-----DKGPDTDDPRSKHKF-----KIHTYGSPTF 114

Calcium-activated, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that is involved in positive and negative regulation of cell proliferation, apoptosis, differentiation, migration and adhesion, cardiac hypertrophy, angiogenesis, platelet function and inflammation, by directly phosphorylating targets such as RAF1, BCL2, CSPG4, TNNT2/CTNT, or activating signaling cascade involving MAPK1/3 (ERK1/2) and RAP1GAP. Depending on the cell type, is involved in cell proliferation and cell growth arrest by positive and negative regulation of the cell cycle. Can promote cell growth by phosphorylating and activating RAF1, which mediates the activation of the MAPK/ERK signaling cascade, and/or by up-regulating CDKN1A, which facilitates active cyclin-dependent kinase (CDK) complex formation. In cells stimulated by the phorbol ester PMA, can trigger a cell cycle arrest program which is associated with the accumulation of the hyper-phosphorylated growth-suppressive form of RB1 and induction of the CDK inhibitors CDKN1A and CDKN1B. Depending on the cell type, exhibits anti-apoptotic function and protects cells from apoptosis by suppressing the p53/TP53-mediated activation of IGFBP3, or mediates anti-apoptotic action by phosphorylating BCL2. During macrophage differentiation induced by macrophage colony-stimulating factor (CSF1), is translocated to the nucleus and is associated with macrophage development. After wounding, translocates from focal contacts to lamellipodia and participates in the modulation of desmosomal adhesion. Plays a role in cell motility by phosphorylating CSPG4, which induces association of CSPG4 with extensive lamellipodia at the cell periphery and polarization of the cell accompanied by increases in cell motility. Negatively regulates myocardial contractility and positively regulates angiogenesis, platelet aggregation and thrombus formation in arteries. Mediates hypertrophic growth of neonatal cardiomyocytes, in part through a MAPK1/3 (ERK1/2)-dependent signaling pathway, and upon PMA treatment, is required to induce cardiomyocyte hypertrophy up to heart failure and death, by increasing protein synthesis, protein-DNA ratio and cell surface area. Regulates cardiomyocyte function by phosphorylating cardiac troponin T (TNNT2/CTNT), which induces significant reduction in actomyosin ATPase activity, myofilament calcium sensitivity and myocardial contractility. In angiogenesis, is required for full endothelial cell migration, adhesion to vitronectin (VTN), and vascular endothelial growth factor A (VEGFA)-dependent regulation of kinase activation and vascular tube formation. Involved in the stabilization of VEGFA mRNA at post-transcriptional level and mediates VEGFA-induced cell proliferation. In the regulation of calcium-induced platelet aggregation, mediates signals from the CD36/GP4 receptor for granule release, and activates the integrin heterodimer ITGA2B-ITGB3 through the RAP1GAP pathway for adhesion. During response to lipopolysaccharides (LPS), may regulate selective LPS-induced macrophage functions involved in host defense and inflammation. But in some inflammatory responses, may negatively regulate NF-kappa-B-induced genes, through IL1A-dependent induction of NF-kappa-B inhibitor alpha (NFKBIA/IKBA). Upon stimulation with 12-O-tetradecanoylphorbol-13-acetate (TPA), phosphorylates EIF4G1, which modulates EIF4G1 binding to MKNK1 and may be involved in the regulation of EIF4E phosphorylation. Phosphorylates KIT, leading to inhibition of KIT activity.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P10102|KPCA_RABIT Protein kinase C alpha type OS=Oryctolagus cuniculus GN=PRKCA PE=2 SV=3

 Score = 49.3 bits (116), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 15/108 (13%)

Query: 123 NRWSKKGT----KLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHK 178
           NR+++KG      +H   DH FIA+     T C  C        GKQG++C+ C    HK
Sbjct: 18  NRFARKGALRQKNVHEVKDHKFIARFFKQPTFCSHCTD-FIWGFGKQGFQCQVCCFVVHK 76

Query: 179 QCHVRTETTCPHSTIQHLELNKDRIELRQQNRWSKKGTKLHIFNDHTF 226
           +CH     +CP +     +   D  + R ++++     K+H +   TF
Sbjct: 77  RCHEFVTFSCPGA-----DKGPDTDDPRSKHKF-----KIHTYGSPTF 114

Calcium-activated, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that is involved in positive and negative regulation of cell proliferation, apoptosis, differentiation, migration and adhesion, cardiac hypertrophy, angiogenesis, platelet function and inflammation, by directly phosphorylating targets such as RAF1, BCL2, CSPG4, TNNT2/CTNT, or activating signaling cascade involving MAPK1/3 (ERK1/2) and RAP1GAP. Depending on the cell type, is involved in cell proliferation and cell growth arrest by positive and negative regulation of the cell cycle. Can promote cell growth by phosphorylating and activating RAF1, which mediates the activation of the MAPK/ERK signaling cascade, and/or by up-regulating CDKN1A, which facilitates active cyclin-dependent kinase (CDK) complex formation. In cells stimulated by the phorbol ester PMA, can trigger a cell cycle arrest program which is associated with the accumulation of the hyper-phosphorylated growth-suppressive form of RB1 and induction of the CDK inhibitors CDKN1A and CDKN1B. Depending on the cell type, exhibits anti-apoptotic function and protects cells from apoptosis by suppressing the p53/TP53-mediated activation of IGFBP3, or mediates anti-apoptotic action by phosphorylating BCL2. During macrophage differentiation induced by macrophage colony-stimulating factor (CSF1), is translocated to the nucleus and is associated with macrophage development. After wounding, translocates from focal contacts to lamellipodia and participates in the modulation of desmosomal adhesion. Plays a role in cell motility by phosphorylating CSPG4, which induces association of CSPG4 with extensive lamellipodia at the cell periphery and polarization of the cell accompanied by increases in cell motility. Negatively regulates myocardial contractility and positively regulates angiogenesis, platelet aggregation and thrombus formation in arteries. Mediates hypertrophic growth of neonatal cardiomyocytes, in part through a MAPK1/3 (ERK1/2)-dependent signaling pathway, and upon PMA treatment, is required to induce cardiomyocyte hypertrophy up to heart failure and death, by increasing protein synthesis, protein-DNA ratio and cell surface area. Regulates cardiomyocyte function by phosphorylating cardiac troponin T (TNNT2/CTNT), which induces significant reduction in actomyosin ATPase activity, myofilament calcium sensitivity and myocardial contractility. In angiogenesis, is required for full endothelial cell migration, adhesion to vitronectin (VTN), and vascular endothelial growth factor A (VEGFA)-dependent regulation of kinase activation and vascular tube formation. Involved in the stabilization of VEGFA mRNA at post-transcriptional level and mediates VEGFA-induced cell proliferation. In the regulation of calcium-induced platelet aggregation, mediates signals from the CD36/GP4 receptor for granule release, and activates the integrin heterodimer ITGA2B-ITGB3 through the RAP1GAP pathway for adhesion. During response to lipopolysaccharides (LPS), may regulate selective LPS-induced macrophage functions involved in host defense and inflammation. But in some inflammatory responses, may negatively regulate NF-kappa-B-induced genes, through IL1A-dependent induction of NF-kappa-B inhibitor alpha (NFKBIA/IKBA). Upon stimulation with 12-O-tetradecanoylphorbol-13-acetate (TPA), phosphorylates EIF4G1, which modulates EIF4G1 binding to MKNK1 and may be involved in the regulation of EIF4E phosphorylation. Phosphorylates KIT, leading to inhibition of KIT activity.

Oryctolagus cuniculus (taxid: 9986)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P20444|KPCA_MOUSE Protein kinase C alpha type OS=Mus musculus GN=Prkca PE=1 SV=3

 Score = 49.3 bits (116), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 15/108 (13%)

Query: 123 NRWSKKGT----KLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHK 178
           NR+++KG      +H   DH FIA+     T C  C        GKQG++C+ C    HK
Sbjct: 18  NRFARKGALRQKNVHEVKDHKFIARFFKQPTFCSHCTD-FIWGFGKQGFQCQVCCFVVHK 76

Query: 179 QCHVRTETTCPHSTIQHLELNKDRIELRQQNRWSKKGTKLHIFNDHTF 226
           +CH     +CP +     +   D  + R ++++     K+H +   TF
Sbjct: 77  RCHEFVTFSCPGA-----DKGPDTDDPRSKHKF-----KIHTYGSPTF 114

Calcium-activated, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that is involved in positive and negative regulation of cell proliferation, apoptosis, differentiation, migration and adhesion, cardiac hypertrophy, angiogenesis, platelet function and inflammation, by directly phosphorylating targets such as RAF1, BCL2, CSPG4, TNNT2/CTNT, or activating signaling cascade involving MAPK1/3 (ERK1/2) and RAP1GAP. Depending on the cell type, is involved in cell proliferation and cell growth arrest by positive and negative regulation of the cell cycle. Can promote cell growth by phosphorylating and activating RAF1, which mediates the activation of the MAPK/ERK signaling cascade, and/or by up-regulating CDKN1A, which facilitates active cyclin-dependent kinase (CDK) complex formation. In cells stimulated by the phorbol ester PMA, can trigger a cell cycle arrest program which is associated with the accumulation of the hyper-phosphorylated growth-suppressive form of RB1 and induction of the CDK inhibitors CDKN1A and CDKN1B. Depending on the cell type, exhibits anti-apoptotic function and protects cells from apoptosis by suppressing the p53/TP53-mediated activation of IGFBP3, or mediates anti-apoptotic action by phosphorylating BCL2. During macrophage differentiation induced by macrophage colony-stimulating factor (CSF1), is translocated to the nucleus and is associated with macrophage development. After wounding, translocates from focal contacts to lamellipodia and participates in the modulation of desmosomal adhesion. Plays a role in cell motility by phosphorylating CSPG4, which induces association of CSPG4 with extensive lamellipodia at the cell periphery and polarization of the cell accompanied by increases in cell motility. Negatively regulates myocardial contractility and positively regulates angiogenesis, platelet aggregation and thrombus formation in arteries. Mediates hypertrophic growth of neonatal cardiomyocytes, in part through a MAPK1/3 (ERK1/2)-dependent signaling pathway, and upon PMA treatment, is required to induce cardiomyocyte hypertrophy up to heart failure and death, by increasing protein synthesis, protein-DNA ratio and cell surface area. Regulates cardiomyocyte function by phosphorylating cardiac troponin T (TNNT2/CTNT), which induces significant reduction in actomyosin ATPase activity, myofilament calcium sensitivity and myocardial contractility. In angiogenesis, is required for full endothelial cell migration, adhesion to vitronectin (VTN), and vascular endothelial growth factor A (VEGFA)-dependent regulation of kinase activation and vascular tube formation. Involved in the stabilization of VEGFA mRNA at post-transcriptional level and mediates VEGFA-induced cell proliferation. In the regulation of calcium-induced platelet aggregation, mediates signals from the CD36/GP4 receptor for granule release, and activates the integrin heterodimer ITGA2B-ITGB3 through the RAP1GAP pathway for adhesion. During response to lipopolysaccharides (LPS), may regulate selective LPS-induced macrophage functions involved in host defense and inflammation. But in some inflammatory responses, may negatively regulate NF-kappa-B-induced genes, through IL1A-dependent induction of NF-kappa-B inhibitor alpha (NFKBIA/IKBA). Upon stimulation with 12-O-tetradecanoylphorbol-13-acetate (TPA), phosphorylates EIF4G1, which modulates EIF4G1 binding to MKNK1 and may be involved in the regulation of EIF4E phosphorylation. Phosphorylates KIT, leading to inhibition of KIT activity.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q9WTQ0|KPCT_RAT Protein kinase C theta type OS=Rattus norvegicus GN=Prkcq PE=1 SV=2

 Score = 48.9 bits (115), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 3/103 (2%)

Query: 124 RWSKKGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVR 183
           R + K  K+H    H F A   P  T C +C       L KQGY+CR C+   HK+C  +
Sbjct: 146 RGAIKQAKVHHVKCHEFTATFFPQPTFCSVC-HEFVWGLNKQGYQCRRCNAAIHKKCIDK 204

Query: 184 TETTCPHSTIQHLE--LNKDRIELRQQNRWSKKGTKLHIFNDH 224
               C  S I   E   +K+R ++   +R+     K   F +H
Sbjct: 205 VIAKCTGSAINSRETMFHKERFKIDMPHRFKVYNYKSPTFCEH 247

Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that mediates non-redundant functions in T-cell receptor (TCR) signaling, including T-cells activation, proliferation, differentiation and survival, by mediating activation of multiple transcription factors such as NF-kappa-B, JUN, NFATC1 and NFATC2. In TCR-CD3/CD28-co-stimulated T-cells, is required for the activation of NF-kappa-B and JUN, which in turn are essential for IL2 production, and participates to the calcium-dependent NFATC1 and NFATC2 transactivation. Mediates the activation of the canonical NF-kappa-B pathway (NFKB1) by direct phosphorylation of CARD11 on several serine residues, inducing CARD11 association with lipid rafts and recruitment of the BCL10-MALT1 complex, which then activates IKK complex, resulting in nuclear translocation and activation of NFKB1. May also play an indirect role in activation of the non-canonical NF-kappa-B (NFKB2) pathway. In the signaling pathway leading to JUN activation, acts by phosphorylating the mediator STK39/SPAK and may not act through MAP kinases signaling. Plays a critical role in TCR/CD28-induced NFATC1 and NFATC2 transactivation by participating in the regulation of reduced inositol 1,4,5-trisphosphate generation and intracellular calcium mobilization. After costimulation of T-cells through CD28 can phosphorylate CBLB and is required for the ubiquitination and subsequent degradation of CBLB, which is a prerequisite for the activation of TCR. During T-cells differentiation, plays an important role in the development of T-helper 2 (Th2) cells following immune and inflammatory responses, and, in the development of inflammatory autoimmune diseases, is necessary for the activation of IL17-producing Th17 cells. May play a minor role in Th1 response. Upon TCR stimulation, mediates T-cell protective survival signal by phosphorylating BAD, thus protecting T-cells from BAD-induced apoptosis, and by up-regulating BCL-X(L)/BCL2L1 levels through NF-kappa-B and JUN pathways. In platelets, regulates signal transduction downstream of the ITGA2B, CD36/GP4, F2R/PAR1 and F2RL3/PAR4 receptors, playing a positive role in 'outside-in' signaling and granule secretion signal transduction. May relay signals from the activated ITGA2B receptor by regulating the uncoupling of WASP and WIPF1, thereby permitting the regulation of actin filament nucleation and branching activity of the Arp2/3 complex. May mediate inhibitory effects of free fatty acids on insulin signaling by phosphorylating IRS1, which in turn blocks IRS1 tyrosine phosphorylation and downstream activation of the PI3K/AKT pathway. Phosphorylates MSN (moesin) in the presence of phosphatidylglycerol or phosphatidylinositol (By similarity). Phosphorylates PDPK1 at 'Ser-504' and 'Ser-532' and negatively regulates its ability to phosphorylate PKB/AKT1.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P90980|KPC2_CAEEL Protein kinase C-like 2 OS=Caenorhabditis elegans GN=pkc-2 PE=2 SV=2

 Score = 48.5 bits (114), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 6/93 (6%)

Query: 132 LHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHS 191
           +H    H FIA+     T C  C K     + KQG++C+ C +  HK+CH      CP +
Sbjct: 33  VHEIKSHKFIARFFKQPTFCSHC-KDFLWGITKQGFQCQVCTLVVHKRCHEFVNFACPGA 91

Query: 192 TIQHLELNKDRIELRQQNRWSKKGTKLHIFNDH 224
                +   D  + RQQ++W  +      F DH
Sbjct: 92  -----DKGVDTDDPRQQHKWKVQTYSSPTFCDH 119

PKC is activated by diacylglycerol which in turn phosphorylates a range of cellular proteins. PKC also serves as the receptor for phorbol esters, a class of tumor promoters.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	252
328785973	895	PREDICTED: hypothetical protein LOC72723	0.507	0.143	0.796	2e-56
380022089	893	PREDICTED: uncharacterized protein LOC10	0.511	0.144	0.782	8e-56
350427848	872	PREDICTED: hypothetical protein LOC10074	0.511	0.147	0.782	8e-56
340724007	907	PREDICTED: hypothetical protein LOC10064	0.507	0.141	0.789	1e-55
307194687	906	Serine/threonine-protein kinase D3 [Harp	0.515	0.143	0.776	1e-55
332021874	930	C2 domain-containing protein 2 [Acromyrm	0.507	0.137	0.781	2e-55
383854494	902	PREDICTED: uncharacterized protein LOC10	0.511	0.143	0.767	4e-55
270003289	836	hypothetical protein TcasGA2_TC002505 [T	0.515	0.155	0.746	4e-53
91079830	828	PREDICTED: similar to GA10531-PA [Tribol	0.515	0.157	0.746	4e-53
307167947	893	Serine/threonine-protein kinase D3 [Camp	0.503	0.142	0.779	2e-49

>gi|328785973|ref|XP_001122942.2| PREDICTED: hypothetical protein LOC727232 [Apis mellifera]

 Score =  224 bits (572), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 102/128 (79%), Positives = 116/128 (90%)

Query: 72  EGSARSSLSEASGVSGASTRTYFNEASTLVLETLENGVKKHYLIPLSLAQKNRWSKKGTK 131
           E S RSSLSEASG+SGAST+TY NEASTLVLETLENG+KKHYL+PLSLAQK++W KKGTK
Sbjct: 761 EQSRRSSLSEASGISGASTKTYINEASTLVLETLENGIKKHYLVPLSLAQKSKWRKKGTK 820

Query: 132 LHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHS 191
           LHIFNDHTFIAKH+ GGTVC++C + LARRLGKQGYECRDC +KCHK CHV+ ETTCP S
Sbjct: 821 LHIFNDHTFIAKHMAGGTVCEVCKRTLARRLGKQGYECRDCQMKCHKHCHVKVETTCPTS 880

Query: 192 TIQHLELN 199
           TIQ +EL+
Sbjct: 881 TIQSIELS 888

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380022089|ref|XP_003694886.1| PREDICTED: uncharacterized protein LOC100866387 [Apis florea]

 Score =  223 bits (567), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 101/129 (78%), Positives = 115/129 (89%)

Query: 71  REGSARSSLSEASGVSGASTRTYFNEASTLVLETLENGVKKHYLIPLSLAQKNRWSKKGT 130
            E S RSSLSEASG+SGAST+TY NEASTLVLETLENG+KKHYL+PLSLAQK++W KKGT
Sbjct: 758 EEQSRRSSLSEASGISGASTKTYVNEASTLVLETLENGIKKHYLVPLSLAQKSKWRKKGT 817

Query: 131 KLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPH 190
           KLHIFNDHTFIAKH+ GGTVC++C + LARRLGKQGYECRDC +KCHK CHV+ E TCP 
Sbjct: 818 KLHIFNDHTFIAKHMAGGTVCEVCKRTLARRLGKQGYECRDCQMKCHKHCHVKVEITCPT 877

Query: 191 STIQHLELN 199
           STIQ +EL+
Sbjct: 878 STIQSIELS 886

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350427848|ref|XP_003494901.1| PREDICTED: hypothetical protein LOC100746676 [Bombus impatiens]

 Score =  223 bits (567), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 101/129 (78%), Positives = 115/129 (89%)

Query: 71  REGSARSSLSEASGVSGASTRTYFNEASTLVLETLENGVKKHYLIPLSLAQKNRWSKKGT 130
            E S RSSLSEASG+SGASTRTY NEASTLVLETLENG+KKHYL+PLSLAQK++W KKGT
Sbjct: 737 EEHSRRSSLSEASGISGASTRTYVNEASTLVLETLENGIKKHYLVPLSLAQKSKWRKKGT 796

Query: 131 KLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPH 190
           KLHIFNDHTFIAKH+ GGTVC++C + LARRLGKQGYECRDC +KCHK CHV+ + TCP 
Sbjct: 797 KLHIFNDHTFIAKHMAGGTVCEVCKRTLARRLGKQGYECRDCQMKCHKHCHVKVDITCPT 856

Query: 191 STIQHLELN 199
           STIQ +EL+
Sbjct: 857 STIQSIELS 865

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340724007|ref|XP_003400377.1| PREDICTED: hypothetical protein LOC100647671 [Bombus terrestris]

 Score =  222 bits (566), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 101/128 (78%), Positives = 115/128 (89%)

Query: 72  EGSARSSLSEASGVSGASTRTYFNEASTLVLETLENGVKKHYLIPLSLAQKNRWSKKGTK 131
           E S RSSLSEASG+SGASTRTY NEASTLVLETLENG+KKHYL+PLSLAQK++W KKGTK
Sbjct: 773 EHSRRSSLSEASGISGASTRTYVNEASTLVLETLENGIKKHYLVPLSLAQKSKWRKKGTK 832

Query: 132 LHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHS 191
           LHIFNDHTFIAKH+ GGTVC++C + LARRLGKQGYECRDC +KCHK CHV+ + TCP S
Sbjct: 833 LHIFNDHTFIAKHMAGGTVCEVCKRTLARRLGKQGYECRDCQMKCHKHCHVKVDITCPTS 892

Query: 192 TIQHLELN 199
           TIQ +EL+
Sbjct: 893 TIQSIELS 900

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307194687|gb|EFN76946.1| Serine/threonine-protein kinase D3 [Harpegnathos saltator]

 Score =  222 bits (566), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 101/130 (77%), Positives = 116/130 (89%)

Query: 70  LREGSARSSLSEASGVSGASTRTYFNEASTLVLETLENGVKKHYLIPLSLAQKNRWSKKG 129
           + E S RSSLSEASG+SG STRTY NEASTLVLETLENG+KKHYL+PLSLAQK++W KKG
Sbjct: 770 VPEQSRRSSLSEASGISGTSTRTYVNEASTLVLETLENGIKKHYLVPLSLAQKSKWRKKG 829

Query: 130 TKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCP 189
           TKLHIFNDHTFIAKH+ GGTVC++C + LARRLGKQGYECRDC +KCHK CHV+ +TTCP
Sbjct: 830 TKLHIFNDHTFIAKHMSGGTVCEVCKRTLARRLGKQGYECRDCQMKCHKHCHVKVDTTCP 889

Query: 190 HSTIQHLELN 199
            STIQ +EL+
Sbjct: 890 TSTIQSIELS 899

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332021874|gb|EGI62210.1| C2 domain-containing protein 2 [Acromyrmex echinatior]

 Score =  221 bits (563), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 100/128 (78%), Positives = 115/128 (89%)

Query: 72  EGSARSSLSEASGVSGASTRTYFNEASTLVLETLENGVKKHYLIPLSLAQKNRWSKKGTK 131
           E S RSSLSEASG+SG STRTY NEASTLVLETLENG+KKHYL+PLSLAQK++W KKGTK
Sbjct: 796 EQSRRSSLSEASGISGTSTRTYVNEASTLVLETLENGIKKHYLVPLSLAQKSKWRKKGTK 855

Query: 132 LHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHS 191
           LHIFNDHTFIAKH+ GGT+C++C + LARRLGKQGYECRDC +KCHK CHV+ +TTCP S
Sbjct: 856 LHIFNDHTFIAKHMVGGTICEVCKRTLARRLGKQGYECRDCQMKCHKHCHVKVDTTCPTS 915

Query: 192 TIQHLELN 199
           TIQ +EL+
Sbjct: 916 TIQSIELS 923

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383854494|ref|XP_003702756.1| PREDICTED: uncharacterized protein LOC100877431 [Megachile rotundata]

 Score =  220 bits (560), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 99/129 (76%), Positives = 115/129 (89%)

Query: 71  REGSARSSLSEASGVSGASTRTYFNEASTLVLETLENGVKKHYLIPLSLAQKNRWSKKGT 130
            E S RSSLSEASG+SGASTRTY NEASTLVLETLENG+KKHYL+PLSLAQK++W KKGT
Sbjct: 767 EEHSRRSSLSEASGISGASTRTYVNEASTLVLETLENGIKKHYLVPLSLAQKSKWRKKGT 826

Query: 131 KLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPH 190
           KLH+FNDHTFIAKH+ GGTVC++C + LARRLGKQGYECRDC +KCHK CHV+ ++ CP 
Sbjct: 827 KLHVFNDHTFIAKHMAGGTVCEVCKRTLARRLGKQGYECRDCQMKCHKHCHVKVDSMCPT 886

Query: 191 STIQHLELN 199
           STIQ +EL+
Sbjct: 887 STIQSIELS 895

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270003289|gb|EEZ99736.1| hypothetical protein TcasGA2_TC002505 [Tribolium castaneum]

 Score =  213 bits (543), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 97/130 (74%), Positives = 112/130 (86%)

Query: 70  LREGSARSSLSEASGVSGASTRTYFNEASTLVLETLENGVKKHYLIPLSLAQKNRWSKKG 129
           + E S RSSLSEASG+S ASTRTY NEASTLVLETLENG+KKHYL+PLSLAQK++W KKG
Sbjct: 693 IDETSRRSSLSEASGLSSASTRTYINEASTLVLETLENGIKKHYLVPLSLAQKSKWRKKG 752

Query: 130 TKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCP 189
            KLHIFNDHTFIA+HL GGTVCQ+C K +ARR+GKQGYECRDC +KCHK CHV+    CP
Sbjct: 753 IKLHIFNDHTFIARHLTGGTVCQVCGKSIARRIGKQGYECRDCLLKCHKHCHVKVNDNCP 812

Query: 190 HSTIQHLELN 199
            STI ++EL+
Sbjct: 813 TSTIHNIELS 822

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91079830|ref|XP_970174.1| PREDICTED: similar to GA10531-PA [Tribolium castaneum]

 Score =  213 bits (543), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 97/130 (74%), Positives = 112/130 (86%)

Query: 70  LREGSARSSLSEASGVSGASTRTYFNEASTLVLETLENGVKKHYLIPLSLAQKNRWSKKG 129
           + E S RSSLSEASG+S ASTRTY NEASTLVLETLENG+KKHYL+PLSLAQK++W KKG
Sbjct: 685 IDETSRRSSLSEASGLSSASTRTYINEASTLVLETLENGIKKHYLVPLSLAQKSKWRKKG 744

Query: 130 TKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCP 189
            KLHIFNDHTFIA+HL GGTVCQ+C K +ARR+GKQGYECRDC +KCHK CHV+    CP
Sbjct: 745 IKLHIFNDHTFIARHLTGGTVCQVCGKSIARRIGKQGYECRDCLLKCHKHCHVKVNDNCP 804

Query: 190 HSTIQHLELN 199
            STI ++EL+
Sbjct: 805 TSTIHNIELS 814

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307167947|gb|EFN61313.1| Serine/threonine-protein kinase D3 [Camponotus floridanus]

 Score =  201 bits (511), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 99/127 (77%), Positives = 112/127 (88%)

Query: 72  EGSARSSLSEASGVSGASTRTYFNEASTLVLETLENGVKKHYLIPLSLAQKNRWSKKGTK 131
           E S RSSLSEAS +SG STRTY NEASTLVLETLENG+KKHYL+PLSLAQK++W KKGTK
Sbjct: 767 EQSRRSSLSEASSISGTSTRTYINEASTLVLETLENGIKKHYLVPLSLAQKSKWRKKGTK 826

Query: 132 LHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHS 191
           LHIFNDHTFIAKH+ GGTVC++C + LARRLGKQGYECRDC +KCHK CHV+ + TCP S
Sbjct: 827 LHIFNDHTFIAKHMAGGTVCEVCKRTLARRLGKQGYECRDCQMKCHKHCHVKVDVTCPTS 886

Query: 192 TIQHLEL 198
           TIQ +EL
Sbjct: 887 TIQSIEL 893

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	252
FB|FBgn0034420	955	CG10737 [Drosophila melanogast	0.511	0.135	0.586	4.7e-43
WB|WBGene00020012	901	R11G1.6d [Caenorhabditis elega	0.464	0.129	0.398	7.1e-21
WB|WBGene00018621	168	F48G7.10 [Caenorhabditis elega	0.384	0.577	0.361	4.3e-09
WB|WBGene00011254	164	R12G8.1 [Caenorhabditis elegan	0.384	0.591	0.306	9.6e-09
UNIPROTKB|G3V4X4	130	PRKCH "Protein kinase C eta ty	0.373	0.723	0.298	4.8e-08
UNIPROTKB|G3V5U5	106	PRKCH "Protein kinase C eta ty	0.373	0.886	0.298	4.8e-08
WB|WBGene00018620	125	F48G7.9 [Caenorhabditis elegan	0.333	0.672	0.329	1.8e-07
UNIPROTKB|F1NJH1	683	PRKCH "Uncharacterized protein	0.420	0.155	0.3	3.1e-07
UNIPROTKB|G3V304	83	PRKCH "Protein kinase C eta ty	0.293	0.891	0.346	4e-07
UNIPROTKB|G3V4Q9	87	PRKCH "Protein kinase C eta ty	0.293	0.850	0.346	4e-07

FB|FBgn0034420 CG10737 [Drosophila melanogaster (taxid:7227)]

 Score = 438 (159.2 bits), Expect = 4.7e-43, Sum P(2) = 4.7e-43
 Identities = 78/133 (58%), Positives = 103/133 (77%)

Query:    70 LREGSARSSLSEASGVSG---ASTRTYFNEASTLVLETLENGVKKHYLIPLSLAQKNRWS 126
             + + S RSS+SE+S +SG   AS +TY +EASTLVLET+ENG+K+H+++PL++AQ+ RW 
Sbjct:   808 ITDHSRRSSISESSAISGFSSASNKTYVHEASTLVLETIENGIKRHFIVPLAIAQRPRWR 867

Query:   127 KKGTKLHIFNDHTFIAKHLPG-GTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTE 185
             +KGTKLHI+NDHTFIAKHL G G  C +C K + RR GKQGYECRDC +  HKQCH+R  
Sbjct:   868 RKGTKLHIYNDHTFIAKHLSGSGLQCSICMKSIPRRPGKQGYECRDCQLISHKQCHIRAP 927

Query:   186 TTCPHSTIQHLEL 198
               CP+ T+  +EL
Sbjct:   928 QACPNPTVLSMEL 940

GO:0019992 "diacylglycerol binding" evidence=ISS

GO:0035556 "intracellular signal transduction" evidence=IEA

WB|WBGene00020012 R11G1.6d [Caenorhabditis elegans (taxid:6239)]

 Score = 257 (95.5 bits), Expect = 7.1e-21, P = 7.1e-21
 Identities = 49/123 (39%), Positives = 75/123 (60%)

Query:    84 GVSGASTRTYFNEASTLVLETLENGVKKHYLIPLSLAQK---NRWSKKGTKLHIFNDHTF 140
             G SG ST++ +   STL+LE  ++   K++LIP ++  +   +R  +KG KLHI+NDHTF
Sbjct:   759 GRSGESTKSLYQH-STLILELDQDKQAKYFLIPPAMLNEPAASRLMRKGKKLHIYNDHTF 817

Query:   141 IAKHLPG--GTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHSTIQHLEL 198
             +A  + G  G  C +C + +     KQ Y+CRDC + CHK CH +T+  C  S +  L++
Sbjct:   818 VAVKVKGCSGATCNVCQQRIRSSFSKQAYQCRDCKMVCHKTCHYKTDAFCTQSNVSKLQI 877

Query:   199 NKD 201
              KD
Sbjct:   878 AKD 880

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

WB|WBGene00018621 F48G7.10 [Caenorhabditis elegans (taxid:6239)]

 Score = 136 (52.9 bits), Expect = 4.3e-09, P = 4.3e-09
 Identities = 38/105 (36%), Positives = 49/105 (46%)

Query:   129 GTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTC 188
             G+K+H  + H F A  L   T C +C K L   LGKQGY C  C    HK+CH      C
Sbjct:    18 GSKIHEISGHRFKATALVQPTCCAICSK-LIYGLGKQGYRCLGCETVVHKRCHSLINDRC 76

Query:   189 ---PHSTIQH--LELNKDRIELRQQ--NRWSKKGTKLHIFNDHTF 226
                P S  Q    EL+ D  ELR +  +    + +  H FN H +
Sbjct:    77 NFGPSSPRQPPPQELSSDSGELRHRIPSPTEPQVSTNHHFNKHFY 121

GO:0004697 "protein kinase C activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

WB|WBGene00011254 R12G8.1 [Caenorhabditis elegans (taxid:6239)]

 Score = 133 (51.9 bits), Expect = 9.6e-09, P = 9.6e-09
 Identities = 31/101 (30%), Positives = 42/101 (41%)

Query:   129 GTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTC 188
             GTK+H  + H F A  L   T C  C K     +GKQGY+C  C    HK+CH      C
Sbjct:    18 GTKIHEISGHKFKAVGLAQPTFCSFCSK-FIYGVGKQGYKCLGCETVVHKRCHALITARC 76

Query:   189 PHSTIQHLELNKDRIEL---RQQNRWSKKGTKLHIFNDHTF 226
                      +  +   L   R ++   +  +  H FN H F
Sbjct:    77 TFGPSSRAPVPAETTNLKTRRSRSASEEPPSNTHHFNKHFF 117

GO:0004697 "protein kinase C activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

UNIPROTKB|G3V4X4 PRKCH "Protein kinase C eta type" [Homo sapiens (taxid:9606)]

 Score = 127 (49.8 bits), Expect = 4.8e-08, P = 4.8e-08
 Identities = 29/97 (29%), Positives = 50/97 (51%)

Query:   131 KLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCH--VRTETTC 188
             ++H  N H F+A +L   T C  C + +    GKQGY+C+ C    HK+CH  + T  TC
Sbjct:     4 RVHQINGHKFMATYLRQPTYCSHCREFIWGVFGKQGYQCQVCTCVVHKRCHHLIVTACTC 63

Query:   189 PHSTIQ-HLELNKDRIELRQQNRWSKKGTKLHIFNDH 224
              ++  +   ++ + R  +   +++S    K+  F DH
Sbjct:    64 QNNINKVDSKIAEQRFGINIPHKFSIHNYKVPTFCDH 100

GO:0046872 "metal ion binding" evidence=IEA

GO:0004699 "calcium-independent protein kinase C activity" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0010744 "positive regulation of macrophage derived foam cell differentiation" evidence=IEA

GO:0017160 "Ral GTPase binding" evidence=IEA

GO:0045618 "positive regulation of keratinocyte differentiation" evidence=IEA

GO:0070528 "protein kinase C signaling cascade" evidence=IEA

UNIPROTKB|G3V5U5 PRKCH "Protein kinase C eta type" [Homo sapiens (taxid:9606)]

 Score = 127 (49.8 bits), Expect = 4.8e-08, P = 4.8e-08
 Identities = 29/97 (29%), Positives = 50/97 (51%)

Query:   131 KLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCH--VRTETTC 188
             ++H  N H F+A +L   T C  C + +    GKQGY+C+ C    HK+CH  + T  TC
Sbjct:     4 RVHQINGHKFMATYLRQPTYCSHCREFIWGVFGKQGYQCQVCTCVVHKRCHHLIVTACTC 63

Query:   189 PHSTIQ-HLELNKDRIELRQQNRWSKKGTKLHIFNDH 224
              ++  +   ++ + R  +   +++S    K+  F DH
Sbjct:    64 QNNINKVDSKIAEQRFGINIPHKFSIHNYKVPTFCDH 100

GO:0046872 "metal ion binding" evidence=IEA

GO:0004699 "calcium-independent protein kinase C activity" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0010744 "positive regulation of macrophage derived foam cell differentiation" evidence=IEA

GO:0017160 "Ral GTPase binding" evidence=IEA

GO:0045618 "positive regulation of keratinocyte differentiation" evidence=IEA

GO:0070528 "protein kinase C signaling cascade" evidence=IEA

WB|WBGene00018620 F48G7.9 [Caenorhabditis elegans (taxid:6239)]

 Score = 122 (48.0 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 29/88 (32%), Positives = 39/88 (44%)

Query:   129 GTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTC 188
             G+K+H    H F A  L   T C  C K +   LGKQGY C  C    HK+CH    T C
Sbjct:    18 GSKVHEVAGHKFRAAALLQPTCCAFCSK-IIYGLGKQGYRCLGCETVVHKKCHASMITCC 76

Query:   189 PHSTIQHLELNKDRIELRQQNRWSKKGT 216
              + + +   L    +    +N W  K +
Sbjct:    77 VYDSSRRSSLAS--VSTSTKN-WPSKSS 101

GO:0004697 "protein kinase C activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

UNIPROTKB|F1NJH1 PRKCH "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 143 (55.4 bits), Expect = 3.1e-07, P = 3.1e-07
 Identities = 33/110 (30%), Positives = 60/110 (54%)

Query:   118 SLAQKNRWSKKGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCH 177
             +L +K + + +  ++H  N H F+A +L   T C  C + +    GKQGY+C+ C    H
Sbjct:   153 NLTRKRQRAMR-RRVHQVNGHKFMATYLRQPTYCSHCKEFIWGVFGKQGYQCQVCTCVVH 211

Query:   178 KQCH--VRTETTCPHSTIQH-LELNKDRIELRQQNRWSKKGTKLHIFNDH 224
             K+CH  + T  TC ++T ++ L++ + R  +   +++S    K+  F DH
Sbjct:   212 KRCHHLIVTACTCQNNTNKNDLKVTEQRFGINIPHKFSVHNYKVPTFCDH 261

GO:0004697 "protein kinase C activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0010744 "positive regulation of macrophage derived foam cell differentiation" evidence=IEA

GO:0017160 "Ral GTPase binding" evidence=IEA

GO:0034351 "negative regulation of glial cell apoptotic process" evidence=IEA

GO:0045618 "positive regulation of keratinocyte differentiation" evidence=IEA

GO:0050861 "positive regulation of B cell receptor signaling pathway" evidence=IEA

GO:0051092 "positive regulation of NF-kappaB transcription factor activity" evidence=IEA

GO:0060252 "positive regulation of glial cell proliferation" evidence=IEA

GO:2000810 "regulation of tight junction assembly" evidence=IEA

UNIPROTKB|G3V304 PRKCH "Protein kinase C eta type" [Homo sapiens (taxid:9606)]

 Score = 119 (46.9 bits), Expect = 4.0e-07, P = 4.0e-07
 Identities = 27/78 (34%), Positives = 41/78 (52%)

Query:   131 KLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPH 190
             ++H  N H F+A +L   T C  C + +    GKQGY+C+ C    HK+CH    T C  
Sbjct:     4 RVHQINGHKFMATYLRQPTYCSHCREFIWGVFGKQGYQCQVCTCVVHKRCHHLIVTAC-- 61

Query:   191 STIQHLELNKDRIELRQQ 208
              T Q+  +NK   ++ +Q
Sbjct:    62 -TCQN-NINKVDSKIAEQ 77

GO:0046872 "metal ion binding" evidence=IEA

GO:0004699 "calcium-independent protein kinase C activity" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0010744 "positive regulation of macrophage derived foam cell differentiation" evidence=IEA

GO:0017160 "Ral GTPase binding" evidence=IEA

GO:0045618 "positive regulation of keratinocyte differentiation" evidence=IEA

GO:0070528 "protein kinase C signaling cascade" evidence=IEA

UNIPROTKB|G3V4Q9 PRKCH "Protein kinase C eta type" [Homo sapiens (taxid:9606)]

 Score = 119 (46.9 bits), Expect = 4.0e-07, P = 4.0e-07
 Identities = 27/78 (34%), Positives = 41/78 (52%)

Query:   131 KLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPH 190
             ++H  N H F+A +L   T C  C + +    GKQGY+C+ C    HK+CH    T C  
Sbjct:     4 RVHQINGHKFMATYLRQPTYCSHCREFIWGVFGKQGYQCQVCTCVVHKRCHHLIVTAC-- 61

Query:   191 STIQHLELNKDRIELRQQ 208
              T Q+  +NK   ++ +Q
Sbjct:    62 -TCQN-NINKVDSKIAEQ 77

GO:0046872 "metal ion binding" evidence=IEA

GO:0004699 "calcium-independent protein kinase C activity" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0010744 "positive regulation of macrophage derived foam cell differentiation" evidence=IEA

GO:0017160 "Ral GTPase binding" evidence=IEA

GO:0045618 "positive regulation of keratinocyte differentiation" evidence=IEA

GO:0070528 "protein kinase C signaling cascade" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	252
cd00029	50	cd00029, C1, Protein kinase C conserved region 1 (	7e-10
smart00109	50	smart00109, C1, Protein kinase C conserved region	2e-08
pfam00130	53	pfam00130, C1_1, Phorbol esters/diacylglycerol bin	3e-07

>gnl|CDD|237996 cd00029, C1, Protein kinase C conserved region 1 (C1)

 Score = 53.3 bits (128), Expect = 7e-10
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 138 HTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTC 188
           H F+ K     T C +C K +   L KQG  C  C VKCHK+C  +   +C
Sbjct: 1   HRFVRKSFFKPTFCDVCRKSI-WGLFKQGLRCSWCKVKCHKKCADKVPPSC 50

Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second messenger, released by activation of Phospholipase D. Phorbol Esters (PE) can act as analogues of DAG and mimic its downstream effects in, for example, tumor promotion. Protein Kinases C are activated by DAG/PE, this activation is mediated by their N-terminal conserved region (C1). DAG/PE binding may be phospholipid dependent. C1 domains may also mediate DAG/PE signals in chimaerins (a family of Rac GTPase activating proteins), RasGRPs (exchange factors for Ras/Rap1), and Munc13 isoforms (scaffolding proteins involved in exocytosis). Length = 50

>gnl|CDD|197519 smart00109, C1, Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)

 Score = 49.0 bits (117), Expect = 2e-08
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 138 HTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTC 188
           H  + +     T C +C K +     KQG  C +C VKCHK+C  +    C
Sbjct: 1   HKHVFRTFTKPTFCCVCRKSI-WGSFKQGLRCSECKVKCHKKCADKVPKAC 50

Some bind phorbol esters and diacylglycerol. Some bind RasGTP. Zinc-binding domains. Length = 50

>gnl|CDD|215738 pfam00130, C1_1, Phorbol esters/diacylglycerol binding domain (C1 domain)

 Score = 45.9 bits (109), Expect = 3e-07
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 138 HTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHS 191
           H F+ +     T C  C + L   LGKQG +C  C +  HK+CH      C   
Sbjct: 1   HHFVHRTFKSPTFCDHCGEFL-WGLGKQGLKCSWCGLNVHKRCHSLVPPECGCG 53

This domain is also known as the Protein kinase C conserved region 1 (C1) domain. Length = 53

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	252
KOG0695|consensus	593		99.97
KOG0696|consensus	683		99.88
KOG0694|consensus	694		99.78
KOG4236|consensus	888		99.59
KOG4236|consensus	888		99.56
PF00130	53	C1_1: Phorbol esters/diacylglycerol binding domain	99.4
cd00029	50	C1 Protein kinase C conserved region 1 (C1) . Cyst	99.25
smart00109	49	C1 Protein kinase C conserved region 1 (C1) domain	99.13
cd06404	83	PB1_aPKC PB1 domain is an essential modular domain	99.13
KOG0696|consensus	683		98.71
KOG1011|consensus	1283		98.65
KOG4239|consensus	348		98.49
KOG0694|consensus	694		97.86
KOG2996|consensus	865		97.36
KOG3564|consensus	604		97.2
KOG0193|consensus	678		96.87
cd06402	87	PB1_p62 The PB1 domain is an essential part of p62	96.56
cd06396	81	PB1_NBR1 The PB1 domain is an essential part of NB	95.77
cd06408	86	PB1_NoxR The PB1 domain is present in the Epichloe	95.54
PF03107	30	C1_2: C1 domain; InterPro: IPR004146 This short do	94.85
KOG1453|consensus	918		94.39
PF07649	30	C1_3: C1-like domain; InterPro: IPR011424 This sho	92.96
KOG1169|consensus	634		92.69
cd06407	82	PB1_NLP A PB1 domain is present in NIN like protei	89.89
PF00130	53	C1_1: Phorbol esters/diacylglycerol binding domain	86.25
KOG3532|consensus	1051		84.88
KOG3532|consensus	1051		81.58

>KOG0695|consensus

Probab=99.97  E-value=2.9e-32  Score=256.29  Aligned_cols=138  Identities=25%  Similarity=0.420  Sum_probs=128.0

Q ss_pred             hHHHHHHHh-----HhhhhhhccCCCCCCCCCCCCCcccchhhhhccccCCccccccccccceeeeeccCCcccccccCC
Q psy1485          43 RVDLIRSAC-----QVYLMVFVLNDHCSSVGPLREGSARSSLSEASGVSGASTRTYFNEASTLVLETLENGVKKHYLIPL  117 (252)
Q Consensus        43 ~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~s~~~~Lseas~~s~~~~~~~~~~~s~L~le~~~~~~~~~~~vp~  117 (252)
                      -.+|+|+||     |++||+|||||     |+|.++|+++||+||.++..      +.++++|+||+++ +.|+.|.+||
T Consensus        40 ~~~~vrd~c~~h~~q~~t~kwidee-----gdp~tv~sqmeleea~r~~~------~~~d~el~ihvf~-~~pe~pglpc  107 (593)
T KOG0695|consen   40 LCEEVRDMCRLHQQQPLTLKWIDEE-----GDPCTVSSQMELEEAFRLAR------QCRDEELIIHVFP-STPEQPGLPC  107 (593)
T ss_pred             HHHHHHHHHHHhhcCCceeEeecCC-----CCcceechhhhHHHHHHHHH------hccccceEEEEcc-CCCCCCCCCC
Confidence            358999999     78999999955     55557999999999999998      8899999999997 5999999999


Q ss_pred             cccccc---cccccCcceeecCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCCCcc
Q psy1485         118 SLAQKN---RWSKKGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHSTI  193 (252)
Q Consensus       118 ~~~~r~---~~~~k~~klh~~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~s~  193 (252)
                      ++++|+   +++++|+|++.++||.|+++.|.+..+|..|.+.|| |+++|||+|.+|++.+|||||..|+..|+....
T Consensus       108 ~gedksiyrrgarrwrkly~~ngh~fqakr~nrr~~c~ic~d~iw-glgrqgyrcinckl~vhkkch~~v~~~cg~~~~  185 (593)
T KOG0695|consen  108 PGEDKSIYRRGARRWRKLYRANGHLFQAKRFNRRAYCGICSDRIW-GLGRQGYRCINCKLLVHKKCHGLVPLTCGKHMD  185 (593)
T ss_pred             CCCcchHHHhHHHHHHHHHhhcCcchhhhhhccceeeeechhhhh-hcccccceeecceeehhhhhcccccchhhhhcc
Confidence            999998   678899999999999999999999999999999997 999999999999999999999999999987654

>KOG0696|consensus

Probab=99.88  E-value=3.1e-24  Score=206.02  Aligned_cols=99  Identities=25%  Similarity=0.469  Sum_probs=89.7

Q ss_pred             ccccCcceeecCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCCCcccccccchhhhc
Q psy1485         125 WSKKGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHSTIQHLELNKDRIE  204 (252)
Q Consensus       125 ~~~k~~klh~~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~s~~~~el~~~r~~  204 (252)
                      ++-|.+.+|++++|.|.+.+|++||||++|.+||| |+++||+||+.|.+++||+||..|+..|++...     +.+...
T Consensus        33 GAlrqKnvhevk~HkF~aRFFKqPTfCsHCkDFiw-GfgKQGfQCqvC~fvvHkrChefVtF~CPGadk-----g~dtDd  106 (683)
T KOG0696|consen   33 GALRQKNVHEVKSHKFIARFFKQPTFCSHCKDFIW-GFGKQGFQCQVCCFVVHKRCHEFVTFSCPGADK-----GPDTDD  106 (683)
T ss_pred             hhhhhcchhhhccceeeehhccCCchhhhhhhhee-ccccCceeeeEEeehhhhhhcceEEEECCCCCC-----CCCCCC
Confidence            33355789999999999999999999999999998 999999999999999999999999999999765     456667


Q ss_pred             cccccccccCCcccccccccccccc
Q psy1485         205 LRQQNRWSKKGTKLHIFNDHTFIAK  229 (252)
Q Consensus       205 ir~PHrf~~~~y~sptFCdHCF~ak  229 (252)
                      ++..|.|++++|.+|||||||+...
T Consensus       107 pr~kHkf~~~tYssPTFCDhCGsLL  131 (683)
T KOG0696|consen  107 PRSKHKFKIHTYSSPTFCDHCGSLL  131 (683)
T ss_pred             cccccceeeeecCCCchhhhHHHHH
Confidence            8899999999999999999998643

>KOG0694|consensus

Probab=99.78  E-value=3.5e-20  Score=185.02  Aligned_cols=115  Identities=28%  Similarity=0.388  Sum_probs=100.6

Q ss_pred             ccccCcceeecCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCCCcccc-cc--cchh
Q psy1485         125 WSKKGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHSTIQH-LE--LNKD  201 (252)
Q Consensus       125 ~~~k~~klh~~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~s~~~-~e--l~~~  201 (252)
                      ++.+..|+|++.||.|.++.+++|++|++|.+||| ||++|||||++|...|||+|+.++.+.|.....++ .+  ....
T Consensus       146 ga~~~~kVhei~gH~F~aT~l~Qpt~Cs~C~kFi~-gL~kqGyQCqvC~~vvHKkCh~kvv~~C~~~~~~n~e~q~~~~~  224 (694)
T KOG0694|consen  146 GAISQSKVHEIDGHKFGATSLRQPTFCSWCQKFIW-GLRKQGYQCQVCWRVVHKKCHVKVVTLCDFLDNLNSEPQGFLFE  224 (694)
T ss_pred             cccccceeEEeeCcEEEEeeccCcchhhhhhhhee-ccCCCceEEeeeeehHhhhhHHHHHHhccCcCccCcCCcccccc
Confidence            44466789999999999999999999999999997 99999999999999999999999999999877632 22  3455


Q ss_pred             hhccccccccccCCcccccccccccc-ccccCCcccccCCc
Q psy1485         202 RIELRQQNRWSKKGTKLHIFNDHTFI-AKHLPGTLYTNSPF  241 (252)
Q Consensus       202 r~~ir~PHrf~~~~y~sptFCdHCF~-ak~L~g~~~~~~~~  241 (252)
                       +++++||+|..++|.+||||+||+- ...++.++++++..
T Consensus       225 -~~~~~Phrf~~~~~q~ptFc~hCGs~L~r~~qqGlkCs~C  264 (694)
T KOG0694|consen  225 -FTFRNPHRFVKLNRQRPTFCDHCGSVLYRLRQQGLKCSTC  264 (694)
T ss_pred             -ccccCCCcchhhhccCccHHHhcchhhhhhcccCeeehhh
Confidence             8999999999999999999999954 77778888887753

>KOG4236|consensus

Probab=99.59  E-value=2.1e-16  Score=155.67  Aligned_cols=125  Identities=29%  Similarity=0.446  Sum_probs=91.3

Q ss_pred             CCCCcccchhhhhccccCCcccccccccccee-----eeeccCCccc-ccccCCcccccccccccCcceeecCCCeEEEE
Q psy1485          70 LREGSARSSLSEASGVSGASTRTYFNEASTLV-----LETLENGVKK-HYLIPLSLAQKNRWSKKGTKLHIFNDHTFIAK  143 (252)
Q Consensus        70 ~~~~s~~~~Lseas~~s~~~~~~~~~~~s~L~-----le~~~~~~~~-~~~vp~~~~~r~~~~~k~~klh~~~gH~F~a~  143 (252)
                      -+.++|+++|+.++-....|.|.-+...+.+-     +.+.+-+.++ .+.....+.+|+.|..|..-.....+|+|+.+
T Consensus       194 NCsG~r~rr~sa~~l~~~~s~~l~~s~~~p~~p~~~~~pst~~~~~~~p~~~~~S~sgrpi~~ek~~~~rvkvPHTf~vH  273 (888)
T KOG4236|consen  194 NCSGVRKRRLSAVSLQPSRSNRLNLSPSSPLEPLLPARPSTELGGPREPSSAILSWSGRPIWMEKMLMSRVKVPHTFIVH  273 (888)
T ss_pred             CCCcccccCCCCCCCCCCCccccccCCCCCCCccccCCCcccccCCCCCCcccccccCCCchhhhhhhhcccCCeeEEEe
Confidence            34599999999988433444443222222211     1111112232 24445668899999877654445589999999


Q ss_pred             ecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCCCcccc
Q psy1485         144 HLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHSTIQH  195 (252)
Q Consensus       144 ~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~s~~~  195 (252)
                      +|.+||.|.+|.+++ .||.+||+||+||+++|||||+.+|+.+|.+.....
T Consensus       274 SY~rpTVCq~CkkLL-kGL~rQGlqCkDCk~NcHkrCa~~v~~dClge~~~n  324 (888)
T KOG4236|consen  274 SYTRPTVCQYCKKLL-KGLFRQGLQCKDCKFNCHKRCAMKVPNDCLGEVTAN  324 (888)
T ss_pred             eccCchHHHHHHHHH-HHHHhcCcccccCCcchhhhhhhhcccccccceeec
Confidence            999999999999998 599999999999999999999999999999876654

>KOG4236|consensus

Probab=99.56  E-value=1.6e-16  Score=156.54  Aligned_cols=109  Identities=18%  Similarity=0.313  Sum_probs=84.8

Q ss_pred             ecCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCCCccc--------c----------
Q psy1485         134 IFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHSTIQ--------H----------  195 (252)
Q Consensus       134 ~~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~s~~--------~----------  195 (252)
                      .+.+|....++|+.||||++|++++| ||.+||++|..|+.+.||+|+.++++.|.+....        +          
T Consensus       142 ~i~PH~l~vhSY~~PtFCD~CGEmL~-GLvrQGlKC~gCglNyHKRCa~kipNNCsG~r~rr~sa~~l~~~~s~~l~~s~  220 (888)
T KOG4236|consen  142 QIRPHTLFVHSYKAPTFCDFCGEMLF-GLVRQGLKCEGCGLNYHKRCAFKIPNNCSGVRKRRLSAVSLQPSRSNRLNLSP  220 (888)
T ss_pred             eeecceeeeecccCchHHHHHHHHHH-HHHHccccccCCCCcHhhhhhhcCCCCCCcccccCCCCCCCCCCCccccccCC
Confidence            56899999999999999999999997 9999999999999999999999999999652110        0          


Q ss_pred             -------------ccc------------------chhh---hccccccccccCCccccccccccc-cccccCCcccccCC
Q psy1485         196 -------------LEL------------------NKDR---IELRQQNRWSKKGTKLHIFNDHTF-IAKHLPGTLYTNSP  240 (252)
Q Consensus       196 -------------~el------------------~~~r---~~ir~PHrf~~~~y~sptFCdHCF-~ak~L~g~~~~~~~  240 (252)
                                   .++                  ..+.   ..+.+||.|.+|+|..||+|.+|- ..+.|..++++|-|
T Consensus       221 ~~p~~p~~~~~pst~~~~~~~p~~~~~S~sgrpi~~ek~~~~rvkvPHTf~vHSY~rpTVCq~CkkLLkGL~rQGlqCkD  300 (888)
T KOG4236|consen  221 SSPLEPLLPARPSTELGGPREPSSAILSWSGRPIWMEKMLMSRVKVPHTFIVHSYTRPTVCQYCKKLLKGLFRQGLQCKD  300 (888)
T ss_pred             CCCCCccccCCCcccccCCCCCCcccccccCCCchhhhhhhhcccCCeeEEEeeccCchHHHHHHHHHHHHHhcCccccc
Confidence                         000                  0011   144589999999999999999994 24555556666666


Q ss_pred             cee
Q psy1485         241 FYF  243 (252)
Q Consensus       241 ~~~  243 (252)
                      --|
T Consensus       301 Ck~  303 (888)
T KOG4236|consen  301 CKF  303 (888)
T ss_pred             CCc
Confidence            444

>PF00130 C1_1: Phorbol esters/diacylglycerol binding domain (C1 domain); InterPro: IPR002219 Diacylglycerol (DAG) is an important second messenger

Probab=99.40  E-value=2e-13  Score=95.12  Aligned_cols=52  Identities=37%  Similarity=0.826  Sum_probs=47.1

Q ss_pred             CeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCC
Q psy1485         138 HTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPH  190 (252)
Q Consensus       138 H~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~  190 (252)
                      |.|+...|..|++|++|+++|| |+++|||+|.+|++.+|++|..+++..|+.
T Consensus         1 H~f~~~~~~~~~~C~~C~~~i~-g~~~~g~~C~~C~~~~H~~C~~~~~~~C~~   52 (53)
T PF00130_consen    1 HHFVPTTFSKPTYCDVCGKFIW-GLGKQGYRCSWCGLVCHKKCLSKVPPSCGC   52 (53)
T ss_dssp             -EEEEEESSSTEB-TTSSSBEC-SSSSCEEEETTTT-EEETTGGCTSSSBSST
T ss_pred             CeEEEccCCCCCCCcccCcccC-CCCCCeEEECCCCChHhhhhhhhcCCCCCC
Confidence            8999999999999999999997 899999999999999999999999999874

Phorbol esters (PE) are analogues of DAG and potent tumour promoters that cause a variety of physiological changes when administered to both cells and tissues. DAG activates a family of serine/threonine protein kinases, collectively known as protein kinase C (PKC) []. Phorbol esters can directly stimulate PKC. The N-terminal region of PKC, known as C1, has been shown [] to bind PE and DAG in a phospholipid and zinc-dependent fashion. The C1 region contains one or two copies (depending on the isozyme of PKC) of a cysteine-rich domain, which is about 50 amino-acid residues long, and which is essential for DAG/PE-binding. The DAG/PE-binding domain binds two zinc ions; the ligands of these metal ions are probably the six cysteines and two histidines that are conserved in this domain.; GO: 0035556 intracellular signal transduction; PDB: 1RFH_A 2FNF_X 3PFQ_A 1PTQ_A 1PTR_A 2VRW_B 1XA6_A 2ENN_A 1TBN_A 1TBO_A ....

>cd00029 C1 Protein kinase C conserved region 1 (C1)

Probab=99.25  E-value=2.7e-12  Score=87.40  Aligned_cols=50  Identities=40%  Similarity=0.822  Sum_probs=47.5

Q ss_pred             CeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccC
Q psy1485         138 HTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTC  188 (252)
Q Consensus       138 H~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C  188 (252)
                      |.|....+.++++|++|.+.|| |+.++||+|.+|++++|++|..+|+.+|
T Consensus         1 H~f~~~~~~~~~~C~~C~~~i~-~~~~~~~~C~~C~~~~H~~C~~~v~~~C   50 (50)
T cd00029           1 HRFVRKSFFKPTFCDVCRKSIW-GLFKQGLRCSWCKVKCHKKCADKVPPSC   50 (50)
T ss_pred             CccEEeeCCCCCChhhcchhhh-ccccceeEcCCCCCchhhhhhccCCCCC
Confidence            8899999999999999999997 7789999999999999999999999877

Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second messenger, released by activation of Phospholipase D. Phorbol Esters (PE) can act as analogues of DAG and mimic its downstream effects in, for example, tumor promotion. Protein Kinases C are activated by DAG/PE, this activation is mediated by their N-terminal conserved region (C1). DAG/PE binding may be phospholipid dependent. C1 domains may also mediate DAG/PE signals in chimaerins (a family of Rac GTPase activating proteins), RasGRPs (exchange factors for Ras/Rap1), and Munc13 isoforms (scaffolding proteins involved in exocytosis).

>smart00109 C1 Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)

Probab=99.13  E-value=2.2e-11  Score=82.11  Aligned_cols=49  Identities=35%  Similarity=0.758  Sum_probs=45.5

Q ss_pred             CeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccC
Q psy1485         138 HTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTC  188 (252)
Q Consensus       138 H~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C  188 (252)
                      |.|....+.++++|++|++.|| ++. +||+|.+|++.+|++|..+|+.+|
T Consensus         1 H~~~~~~~~~~~~C~~C~~~i~-~~~-~~~~C~~C~~~~H~~C~~~v~~~C   49 (49)
T smart00109        1 HHFVERTFKKPTKCCVCRKSIW-GSF-QGLRCSWCKVKCHKKCAEKVPQPC   49 (49)
T ss_pred             CceEEeccCCCCCccccccccC-cCC-CCcCCCCCCchHHHHHHhhcCCCC
Confidence            7899999999999999999997 655 899999999999999999999877

Some bind phorbol esters and diacylglycerol. Some bind RasGTP. Zinc-binding domains.

>cd06404 PB1_aPKC PB1 domain is an essential modular domain of the atypical protein kinase C (aPKC) which in complex with Par6 and Par3 proteins is crucial for establishment of apical-basal polarity of animal cells

Probab=99.13  E-value=1.2e-11  Score=95.36  Aligned_cols=52  Identities=21%  Similarity=0.333  Sum_probs=46.6

Q ss_pred             HHHHHHHh-----HhhhhhhccCCCCCCCCCCCCCcccchhhhhccccCCccccccccccceeeeecc
Q psy1485          44 VDLIRSAC-----QVYLMVFVLNDHCSSVGPLREGSARSSLSEASGVSGASTRTYFNEASTLVLETLE  106 (252)
Q Consensus        44 ~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~s~~~~Lseas~~s~~~~~~~~~~~s~L~le~~~  106 (252)
                      .++||++|     |+|||+|+|||     |+|.++|+++||.||+++++      ++++|+|+||.++
T Consensus        26 ~~~v~~~c~~~~~q~ft~kw~DEE-----GDp~tiSS~~EL~EA~rl~~------~n~~~~l~ihvfp   82 (83)
T cd06404          26 CNEVRDMCRFHNDQPFTLKWIDEE-----GDPCTISSQMELEEAFRLYE------LNKDSELNIHVFP   82 (83)
T ss_pred             HHHHHHHhCCCCCCcEEEEEECCC-----CCceeecCHHHHHHHHHHHH------hcCcccEEEEecC
Confidence            57899999     79999999954     44448999999999999999      9999999999986

PB1 domain is a modular domain mediating specific protein-protein interaction which play roles in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi,

>KOG0696|consensus

Probab=98.71  E-value=2.1e-09  Score=104.58  Aligned_cols=72  Identities=22%  Similarity=0.399  Sum_probs=59.9

Q ss_pred             CCcccccccccccCcceeecCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCCCcc
Q psy1485         116 PLSLAQKNRWSKKGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHSTI  193 (252)
Q Consensus       116 p~~~~~r~~~~~k~~klh~~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~s~  193 (252)
                      .|++.++-....     -....|.|..++|..||||++|+.+++ |+..||++|..|.+++|++|...||.-|+....
T Consensus        94 ~CPGadkg~dtD-----dpr~kHkf~~~tYssPTFCDhCGsLLy-Gl~HQGmKC~~C~mNVH~rCv~nVPslCG~Dht  165 (683)
T KOG0696|consen   94 SCPGADKGPDTD-----DPRSKHKFKIHTYSSPTFCDHCGSLLY-GLIHQGMKCDTCDMNVHHRCVENVPSLCGTDHT  165 (683)
T ss_pred             ECCCCCCCCCCC-----CcccccceeeeecCCCchhhhHHHHHH-HHHhcccccccccchHHHHHhhcCCcccCCcch
Confidence            566555543321     234579999999999999999999998 999999999999999999999999999986543

>KOG1011|consensus

Probab=98.65  E-value=1.1e-09  Score=110.21  Aligned_cols=87  Identities=24%  Similarity=0.468  Sum_probs=72.6

Q ss_pred             ecCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCCCcccccc-------------cch
Q psy1485         134 IFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHSTIQHLE-------------LNK  200 (252)
Q Consensus       134 ~~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~s~~~~e-------------l~~  200 (252)
                      ...+|.|..++|..||||.-|.+++| |+.+||++|..|++.||.+|..++.++|...++....             ...
T Consensus       169 ~ttphnf~~~t~~tpt~cyecegllw-glarqglrctqc~vk~hdkc~ell~adclqraaeks~khg~~drtq~lv~~ir  247 (1283)
T KOG1011|consen  169 ATTPHNFATTTFQTPTFCYECEGLLW-GLARQGLRCTQCQVKVHDKCRELLSADCLQRAAEKSTKHGEADRTQSLVNVIR  247 (1283)
T ss_pred             cCCCCceeeeeccCCchhhhhhhHHH-HHhhcccchhhccccHHHHHHHHhhhHHHHHHHHhhccccchhhHHHHHHHHH
Confidence            46899999999999999999999997 9999999999999999999999999999887765421             136


Q ss_pred             hhhccccccccccCCcccccc
Q psy1485         201 DRIELRQQNRWSKKGTKLHIF  221 (252)
Q Consensus       201 ~r~~ir~PHrf~~~~y~sptF  221 (252)
                      +|++++...+.+++...+..|
T Consensus       248 drmki~e~nkpevfq~ir~vf  268 (1283)
T KOG1011|consen  248 DRMKIQEQNKPEVFQMIRTVF  268 (1283)
T ss_pred             HHHHHHhhcChHHHHHHHHHh
Confidence            777887777776666555433

>KOG4239|consensus

Probab=98.49  E-value=4.1e-08  Score=91.65  Aligned_cols=112  Identities=16%  Similarity=0.255  Sum_probs=80.6

Q ss_pred             ceeecCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCCCccccc--ccc-hhhhcccc
Q psy1485         131 KLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHSTIQHL--ELN-KDRIELRQ  207 (252)
Q Consensus       131 klh~~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~s~~~~--el~-~~r~~ir~  207 (252)
                      .+...++|.|......-|++|+-|++++| |+.++|++|..|++.||.+|..++..+|.....++.  +.. .--.+.+.
T Consensus        45 ~lv~~r~~~~~~~g~~~~~~~~~c~~~~~-~vl~egL~c~~c~~tch~rcr~lv~ldc~~p~~sS~~w~s~v~~~~~~~~  123 (348)
T KOG4239|consen   45 LLVPLRGHNFYTAGLLLPTWCDKCGDFIW-GVLREGLLCIHCKFTCHIRCRMLVDLDCRSPPSSSTSWDSIVERYVNVDT  123 (348)
T ss_pred             ceeeccccccccccccccccchhhhHHHH-HHHHHHHhhhhcCCccCHHHHhhhhhhhcCCCCCccCCCCccccccccCC
Confidence            34556899999999999999999999997 999999999999999999999999999987664432  211 11123333


Q ss_pred             cccc------------ccCCccccccccccccccccCCcccccCCceeecc
Q psy1485         208 QNRW------------SKKGTKLHIFNDHTFIAKHLPGTLYTNSPFYFRRD  246 (252)
Q Consensus       208 PHrf------------~~~~y~sptFCdHCF~ak~L~g~~~~~~~~~~~~~  246 (252)
                      |-.|            ++++|....-++  +|-.+ ..|.|+-+.--.+.+
T Consensus       124 p~e~t~p~~~~~ei~~ki~syn~~~s~~--s~~L~-edg~~tg~i~v~~~l  171 (348)
T KOG4239|consen  124 PVEWTDPEPQEMEIEQKIHSYNSESSTL--SMGLH-EDGEYTGFIKVTLKL  171 (348)
T ss_pred             CccccCCCchhhhhhcCcchhhchhccc--ccccC-cccccCCceEEEeec
Confidence            3333            456666554344  55454 778887766555443

>KOG0694|consensus

Probab=97.86  E-value=2.9e-06  Score=86.18  Aligned_cols=63  Identities=27%  Similarity=0.519  Sum_probs=57.8

Q ss_pred             eeecCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCCCcccc
Q psy1485         132 LHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHSTIQH  195 (252)
Q Consensus       132 lh~~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~s~~~  195 (252)
                      +...++|.|..+.+.+|+||.+|+.++| |..+||.+|..|+.+||.+|..++...|+.+....
T Consensus       225 ~~~~~Phrf~~~~~q~ptFc~hCGs~L~-r~~qqGlkCs~Cg~n~H~~c~~~va~~CG~s~t~~  287 (694)
T KOG0694|consen  225 FTFRNPHRFVKLNRQRPTFCDHCGSVLY-RLRQQGLKCSTCGRNVHNRCVENLAPNCGGSRTFS  287 (694)
T ss_pred             ccccCCCcchhhhccCccHHHhcchhhh-hhcccCeeehhhhccccHHHHHhcccCCCCchhhh
Confidence            5566789999999999999999999997 89999999999999999999999999999876654

>KOG2996|consensus

Probab=97.36  E-value=3.9e-05  Score=77.22  Aligned_cols=54  Identities=33%  Similarity=0.658  Sum_probs=49.7

Q ss_pred             ecCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCC
Q psy1485         134 IFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCP  189 (252)
Q Consensus       134 ~~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~  189 (252)
                      ..++|.|+.++|..+|.|.+|..++ +|...|||+|.-|+...||.|...||. |+
T Consensus       520 ~an~H~fqmhtF~~~tsCkvC~mll-rGtfYQGY~C~~c~~~ahkecl~~vp~-cg  573 (865)
T KOG2996|consen  520 RANNHDFQMHTFKNTTSCKVCQMLL-RGTFYQGYKCEKCGADAHKECLGRVPP-CG  573 (865)
T ss_pred             cccCcceEEEeccCCcchHHHHHHh-hhhhhcceeeeeccccHHHHhccCCCC-cc
Confidence            4688999999999999999999988 699999999999999999999998874 53

>KOG3564|consensus

Probab=97.20  E-value=5.8e-05  Score=74.47  Aligned_cols=99  Identities=23%  Similarity=0.407  Sum_probs=69.5

Q ss_pred             cCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCCCcccccc-cchhhhcccccccccc
Q psy1485         135 FNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHSTIQHLE-LNKDRIELRQQNRWSK  213 (252)
Q Consensus       135 ~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~s~~~~e-l~~~r~~ir~PHrf~~  213 (252)
                      ...|.|+.+.|..+-.|..|++.|  .|++-+++|++|...||..|..+++.+|.+......- ....     +-.-|.+
T Consensus       284 mr~htfi~kt~~~~~~Cv~C~krI--kfg~~sLkCRdC~v~~H~~Cr~~l~lpCIP~l~g~~~k~geg-----~L~DF~~  356 (604)
T KOG3564|consen  284 MRLHTFISKTVIKPENCVPCGKRI--KFGKLSLKCRDCPVVCHIECRDKLTLPCIPTLIGPPVKTGEG-----MLADFAP  356 (604)
T ss_pred             cccchhhHhhccCcccchhhhhhh--hhhhcccccccCCeeechhHHhcCCCCCcCccCCCCCccCce-----ehhhhcc
Confidence            466999999999999999999999  5889999999999999999999999999875433210 0000     0111111


Q ss_pred             CC-ccccccccccccccccCCcccccCCce
Q psy1485         214 KG-TKLHIFNDHTFIAKHLPGTLYTNSPFY  242 (252)
Q Consensus       214 ~~-y~sptFCdHCF~ak~L~g~~~~~~~~~  242 (252)
                      .. -+.|..--||-..++..  +||+--.|
T Consensus       357 s~aPMIPalVVHCVneIEaR--GLteeGLY  384 (604)
T KOG3564|consen  357 STAPMIPALVVHCVNEIEAR--GLTEEGLY  384 (604)
T ss_pred             cccccchHHHHHHHHHHHHc--ccccccee
Confidence            11 03455566888777744  35665555

>KOG0193|consensus

Probab=96.87  E-value=0.0005  Score=69.75  Aligned_cols=54  Identities=28%  Similarity=0.736  Sum_probs=46.5

Q ss_pred             cCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCCCc
Q psy1485         135 FNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHST  192 (252)
Q Consensus       135 ~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~s  192 (252)
                      ...|.|.-+.|....||+.|+.-+|    -.|++|+.|++.+|..|...|+..|....
T Consensus       176 l~~H~~~rktf~~~~fC~~~~~~~l----~~gfrC~~C~~KfHq~Cs~~vp~~C~~~~  229 (678)
T KOG0193|consen  176 LTTHNFVRKTFFPLAFCDSCCNKFL----FTGFRCQTCGYKFHQSCSPRVPTSCVNPD  229 (678)
T ss_pred             ccceeeeeccccchhhhhhhcchhh----hcccccCCCCCccccccCCCCCCCCCCcc
Confidence            5679999999999999996665443    58999999999999999999999999443

>cd06402 PB1_p62 The PB1 domain is an essential part of p62 scaffold protein (alias sequestosome 1,SQSTM) involved in cell signaling, receptor internalization, and protein turnover

Probab=96.56  E-value=0.00063  Score=53.14  Aligned_cols=39  Identities=18%  Similarity=0.197  Sum_probs=31.7

Q ss_pred             hHHHHHHHh-----HhhhhhhccCCCCCCCCCCCCCcccchhhhhcccc
Q psy1485          43 RVDLIRSAC-----QVYLMVFVLNDHCSSVGPLREGSARSSLSEASGVS   86 (252)
Q Consensus        43 ~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~s~~~~Lseas~~s   86 (252)
                      =.+.||++|     |.|||+|.|+|     |++.++|+++||++|...+
T Consensus        32 L~~~V~~~f~~l~~~~ftlky~Dee-----GDlvtIssdeEL~~A~~~~   75 (87)
T cd06402          32 LVEKVAAVFPSLRGKNFQLFWKDEE-----GDLVAFSSDEELVMALGSL   75 (87)
T ss_pred             HHHHHHHHccccCCCcEEEEEECCC-----CCEEeecCHHHHHHHHHcC
Confidence            357889999     58999999955     5555899999999999554

The PB1 domain is a modular domain mediating specific protein-protein interaction which play roles in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants.

>cd06396 PB1_NBR1 The PB1 domain is an essential part of NBR1 protein, next to BRCA1, a scaffold protein mediating specific protein-protein interaction with both titin protein kinase and with another scaffold protein p62

Probab=95.77  E-value=0.0018  Score=49.96  Aligned_cols=41  Identities=10%  Similarity=0.094  Sum_probs=33.4

Q ss_pred             HHHHHHHhH--hhhhhhcc--CCCCCCCCCCCCCcccchhhhhccccCCccc
Q psy1485          44 VDLIRSACQ--VYLMVFVL--NDHCSSVGPLREGSARSSLSEASGVSGASTR   91 (252)
Q Consensus        44 ~~~~~~~~~--~~~~~~~~--~d~~~~~~~~~~~s~~~~Lseas~~s~~~~~   91 (252)
                      -.||+..|.  .|++||||  +|||       .++++.+|+|+++++.-+++
T Consensus        28 ~~ev~~rf~l~~f~lKYlDde~e~v-------~lssd~eLeE~~rl~~~~~~   72 (81)
T cd06396          28 EAMVKVSFGLNDIQIKYVDEENEEV-------SVNSQGEYEEALKSAVRQGN   72 (81)
T ss_pred             HHHHHHHhCCCcceeEEEcCCCCEE-------EEEchhhHHHHHHHHHhCCC
Confidence            357888884  69999998  6677       69999999999988874443

A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. The NBR1 protein contains a type I PB1 domain.

>cd06408 PB1_NoxR The PB1 domain is present in the Epichloe festucae NoxR protein (NADPH oxidase regulator), a key regulator of NADPH oxidase isoform, NoxA

Probab=95.54  E-value=0.004  Score=48.63  Aligned_cols=37  Identities=16%  Similarity=0.053  Sum_probs=31.0

Q ss_pred             hHHHHHHHh---Hhhhhhhcc-CCCCCCCCCCCCCcccchhhhhcccc
Q psy1485          43 RVDLIRSAC---QVYLMVFVL-NDHCSSVGPLREGSARSSLSEASGVS   86 (252)
Q Consensus        43 ~~~~~~~~~---~~~~~~~~~-~d~~~~~~~~~~~s~~~~Lseas~~s   86 (252)
                      =.+.||+.|   |.|+++|.| +|+|       +++++.+|++|+..+
T Consensus        27 L~~kIrdkf~~~~~~~iKykDEGD~i-------ti~sq~DLd~Ai~~a   67 (86)
T cd06408          27 FEDKIRDKFGFKRRLKIKMKDDGDMI-------TMGDQDDLDMAIDTA   67 (86)
T ss_pred             HHHHHHHHhCCCCceEEEEEcCCCCc-------cccCHHHHHHHHHHH
Confidence            468899999   789999999 5555       899999999999443

NoxA is essential for growth control of the fungal endophyte in plant tissue in the process of symbiotic interaction between a fungi and its plant host. The Epichloe festucae p67(phox)-like regulator, NoxR, dispensable in culture but essential in plants for the symbiotic interaction. Plants infected with a noxR deletion mutant show severe stunting and premature senescence, whereas hyphae in the meristematic tissues show increased branching leading to increased fungal colonization of pseudostem and leaf blade tissue. The PB1 domain is a modular domain mediating specific protein-protein interactions which a play role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is

>PF03107 C1_2: C1 domain; InterPro: IPR004146 This short domain is rich in cysteines and histidines

Probab=94.85  E-value=0.018  Score=36.06  Aligned_cols=29  Identities=24%  Similarity=0.744  Sum_probs=25.0

Q ss_pred             cCCCCCCcccccccccccccCCcccccccccc
Q psy1485         150 VCQMCCKPLARRLGKQGYECRDCHVKCHKQCH  181 (252)
Q Consensus       150 ~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~  181 (252)
                      .|++|.+.+ .|+.  +|.|..|.+..|.+|+
T Consensus         2 ~C~~C~~~~-~~~~--~Y~C~~c~f~lh~~Ca   30 (30)
T PF03107_consen    2 WCDVCRRKI-DGFY--FYHCSECCFTLHVRCA   30 (30)
T ss_pred             CCCCCCCCc-CCCE--eEEeCCCCCeEcCccC
Confidence            599999987 3654  9999999999999985

The pattern of conservation is similar to that found in DAG_PE-bind (IPR002219 from INTERPRO), therefore we have termed this domain DC1 for divergent C1 domain. This domain probably also binds to two zinc ions. The function of proteins with this domain is uncertain, however this domain may bind to molecules such as diacylglycerol. This family are found in plant proteins.

>KOG1453|consensus

Probab=94.39  E-value=0.0082  Score=63.82  Aligned_cols=58  Identities=19%  Similarity=0.416  Sum_probs=46.8

Q ss_pred             eeecCCCeEEEEecCC--CCcCCCCCCcccccccccccccCCccccccccccccccccCCCCccc
Q psy1485         132 LHIFNDHTFIAKHLPG--GTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHSTIQ  194 (252)
Q Consensus       132 lh~~~gH~F~a~~f~~--pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~s~~  194 (252)
                      +-.++| .|..+.+..  |+.|..|...+| .   +++.|..|.++||++|...+...|+.....
T Consensus       539 ~~~~sg-~~~~~~r~~~~P~~c~~c~~~~~-~---~~~~c~~c~~~chkkc~~~~~~~~~~~~l~  598 (918)
T KOG1453|consen  539 VNLHSG-ALKHYLRSLRKPAPCRTCETYSW-F---MELECELCRLVCHKKCLEALKSLCGHERLP  598 (918)
T ss_pred             chhccC-cchhhhhcccCCcccccccccch-h---hhcccceeeeeccccchhhccccCcccccc
Confidence            334444 565565555  999999999998 3   449999999999999999999999987764

>PF07649 C1_3: C1-like domain; InterPro: IPR011424 This short domain is rich in cysteines and histidines

Probab=92.96  E-value=0.031  Score=34.82  Aligned_cols=29  Identities=31%  Similarity=0.865  Sum_probs=13.1

Q ss_pred             cCCCCCCcccccccccccccCCcccccccccc
Q psy1485         150 VCQMCCKPLARRLGKQGYECRDCHVKCHKQCH  181 (252)
Q Consensus       150 ~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~  181 (252)
                      .|+.|+..+. |  ...|.|..|.+..|..|+
T Consensus         2 ~C~~C~~~~~-~--~~~Y~C~~Cdf~lH~~Ca   30 (30)
T PF07649_consen    2 RCDACGKPID-G--GWFYRCSECDFDLHEECA   30 (30)
T ss_dssp             --TTTS-----S----EEE-TTT-----HHHH
T ss_pred             cCCcCCCcCC-C--CceEECccCCCccChhcC
Confidence            5899999773 3  578999999999999985

The pattern of conservation is similar to that found in IPR002219 from INTERPRO. C1 domains are protein kinase C-like zinc finger structures. Diacylglycerol (DAG) kinases (DGKs) have a two or three commonly conserved cysteine-rich C1 domains []. DGKs modulate the balance between the two signaling lipids, DAG and phosphatidic acid (PA), by phosphorylating DAG to yield PA []. The PKD (protein kinase D) family are novel DAG receptors. They have twin C1 domains, designated C1a and C1b, which bind DAG or phorbol esters. Individual C1 domains differ in ligand-binding activity and selectivity []. ; GO: 0047134 protein-disulfide reductase activity, 0055114 oxidation-reduction process; PDB: 1V5N_A.

>KOG1169|consensus

Probab=92.69  E-value=0.054  Score=55.52  Aligned_cols=60  Identities=28%  Similarity=0.472  Sum_probs=48.6

Q ss_pred             eeecCCCeEEEEecCCCCcCCCCCCccc-ccc-cccccccCCccccccccccccccccCCCC
Q psy1485         132 LHIFNDHTFIAKHLPGGTVCQMCCKPLA-RRL-GKQGYECRDCHVKCHKQCHVRTETTCPHS  191 (252)
Q Consensus       132 lh~~~gH~F~a~~f~~pt~C~vC~~~Iw-~Gl-~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~  191 (252)
                      .+....|.+....+..|++|.+|.+..- -|+ .+||+.|..|++.+|..|+..+...|...
T Consensus        93 ~k~~~~~~~~~~~~~~~~~c~~c~~~c~~~~~~~~~g~~C~~C~~~vh~~C~~~~~~~~~~~  154 (634)
T KOG1169|consen   93 HKTDGDHVWRPKHLWKPAYCFVCPKSCGSCGVGIKQGLCCDWCGRTVHERCVRRADPECQCK  154 (634)
T ss_pred             hhccCceeccCCCCCCCceEEeccccccchhhcccCceeeccccchHHHHHHhhcCcccccc
Confidence            3456788999999999999999998741 033 48999999999999999999888876543

>cd06407 PB1_NLP A PB1 domain is present in NIN like proteins (NLP), a key enzyme in a process of establishment of symbiosis betweeen legumes and nitrogen fixing bacteria (Rhizobium)

Probab=89.89  E-value=0.086  Score=40.51  Aligned_cols=37  Identities=11%  Similarity=0.091  Sum_probs=30.8

Q ss_pred             HHHHHHHh-----Hhhhhhhcc--CCCCCCCCCCCCCcccchhhhhccccC
Q psy1485          44 VDLIRSAC-----QVYLMVFVL--NDHCSSVGPLREGSARSSLSEASGVSG   87 (252)
Q Consensus        44 ~~~~~~~~-----~~~~~~~~~--~d~~~~~~~~~~~s~~~~Lseas~~s~   87 (252)
                      .++|++.|     +.|+++|+|  +|+|       .++.+..|+||++++.
T Consensus        26 ~~~i~~r~~~~~~~~f~LkY~Ddegd~v-------~ltsd~DL~eai~i~~   69 (82)
T cd06407          26 KQEIAKRFKLDDMSAFDLKYLDDDEEWV-------LLTCDADLEECIDVYR   69 (82)
T ss_pred             HHHHHHHhCCCCCCeeEEEEECCCCCeE-------EeecHHHHHHHHHHHH
Confidence            56778888     469999999  6666       6999999999997766

The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes like osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-inte

>PF00130 C1_1: Phorbol esters/diacylglycerol binding domain (C1 domain); InterPro: IPR002219 Diacylglycerol (DAG) is an important second messenger

Probab=86.25  E-value=0.38  Score=32.92  Aligned_cols=31  Identities=13%  Similarity=-0.053  Sum_probs=22.0

Q ss_pred             cccccCCccccccccccccccc-cCCcccccC
Q psy1485         209 NRWSKKGTKLHIFNDHTFIAKH-LPGTLYTNS  239 (252)
Q Consensus       209 Hrf~~~~y~sptFCdHCF~ak~-L~g~~~~~~  239 (252)
                      |.|...++..|++|++|...++ +...+|+++
T Consensus         1 H~f~~~~~~~~~~C~~C~~~i~g~~~~g~~C~   32 (53)
T PF00130_consen    1 HHFVPTTFSKPTYCDVCGKFIWGLGKQGYRCS   32 (53)
T ss_dssp             -EEEEEESSSTEB-TTSSSBECSSSSCEEEET
T ss_pred             CeEEEccCCCCCCCcccCcccCCCCCCeEEEC
Confidence            8899999999999999986663 244455554

Phorbol esters (PE) are analogues of DAG and potent tumour promoters that cause a variety of physiological changes when administered to both cells and tissues. DAG activates a family of serine/threonine protein kinases, collectively known as protein kinase C (PKC) []. Phorbol esters can directly stimulate PKC. The N-terminal region of PKC, known as C1, has been shown [] to bind PE and DAG in a phospholipid and zinc-dependent fashion. The C1 region contains one or two copies (depending on the isozyme of PKC) of a cysteine-rich domain, which is about 50 amino-acid residues long, and which is essential for DAG/PE-binding. The DAG/PE-binding domain binds two zinc ions; the ligands of these metal ions are probably the six cysteines and two histidines that are conserved in this domain.; GO: 0035556 intracellular signal transduction; PDB: 1RFH_A 2FNF_X 3PFQ_A 1PTQ_A 1PTR_A 2VRW_B 1XA6_A 2ENN_A 1TBN_A 1TBO_A ....

>KOG3532|consensus

Probab=84.88  E-value=0.19  Score=52.37  Aligned_cols=48  Identities=4%  Similarity=-0.149  Sum_probs=42.7

Q ss_pred             cCCCeEEEEecCCCCcCCCCCCcccccccccccccCCcccccccccccccc
Q psy1485         135 FNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTE  185 (252)
Q Consensus       135 ~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~  185 (252)
                      -.+|.|...+|.+.+-|+.|+.-||   .+-..+|+.|.+.||+||.....
T Consensus       744 ~~~~d~~~~h~~r~~~~~~~~~ki~---~~~a~~~~~~~~~~~~k~~~~~~  791 (1051)
T KOG3532|consen  744 EDGGDDEEAHLDRKRSASTRKAKIQ---ATFAAGKKKVLDLMPQKRKNTDA  791 (1051)
T ss_pred             CCCCchHHhhhhhhcccchhcccee---ehhhhcccHHHHhcchhhhcchh
Confidence            4679999999999999999999998   57788999999999999976553

>KOG3532|consensus

Probab=81.58  E-value=0.22  Score=51.84  Aligned_cols=50  Identities=10%  Similarity=-0.044  Sum_probs=44.0

Q ss_pred             ecCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccc
Q psy1485         134 IFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTET  186 (252)
Q Consensus       134 ~~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~  186 (252)
                      ..+-|+|....+..+|||..|.+-.|   .+..-+|.-|.|+||++|+++..+
T Consensus        69 ~~N~~r~~~t~~~~~t~~~~~~~~~~---~~~AS~c~s~~~V~h~lfqE~k~a  118 (1051)
T KOG3532|consen   69 PINQFRPAQIPEELRTFLKSGEDGQG---ISKASSCNSISLVLHMLFQEHKDT  118 (1051)
T ss_pred             chhhcChhcCcccccccccccccchh---hHHHHHHHHHHHHHHHHHHHhhhh
Confidence            46779999999999999999999987   578889999999999999876543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	252
2yuu_A	83	Solution Structure Of The First Phorbol EstersDIACY		4e-05
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		1e-04

>pdb|2YUU|A Chain A, Solution Structure Of The First Phorbol EstersDIACYLGLYCEROL BINDING DOMAIN OF HUMAN PROTEIN Kinase C, Delta Length = 83

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 126 SKKGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQC 180
           S K  K+H   +H FIA      T C +C K     L KQGY+CR C+   HK+C
Sbjct: 6   SGKQAKIHYIKNHEFIATFFGQPTFCSVC-KDFVWGLNKQGYKCRQCNAAIHKKC 59

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 15/107 (14%)
Query: 124 RWSKKGT----KLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQ 179
           R+++KG      +H   +H F A+     T C  C        GKQG++C+ C    HK+
Sbjct: 20  RFARKGALRQKNVHEVKNHKFTARFFKQPTFCSHCTD-FIWGFGKQGFQCQVCSFVVHKR 78
Query: 180 CHVRTETTCPHSTIQHLELNKDRIELRQQNRWSKKGTKLHIFNDHTF 226
           CH     +CP +         D+       R SK   K+H ++  TF
Sbjct: 79  CHEFVTFSCPGA---------DKGPASDDPR-SKHKFKIHTYSSPTF 115

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	252
2yuu_A	83	NPKC-delta, protein kinase C delta type; metal bin	1e-16
2enn_A	77	NPKC-theta, protein kinase C theta type; zinc bind	5e-16
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	3e-12
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-06
2row_A	84	RHO-associated protein kinase 2; ATP-binding, coil	3e-10
2db6_A	74	SH3 and cysteine rich domain 3; STAC3, C1 domain,	2e-08
1y8f_A	66	UNC-13 homolog A, MUNC13-1; cysteine-rich domain,	2e-08
1faq_A	52	RAF-1; transferase, serine/threonine-protein kinas	3e-08
2fnf_X	72	Putative RAS effector NORE1; zinc, signal transduc	8e-08
2eli_A	85	Protein kinase C alpha type; PKC-alpha, PKC-A, str	8e-08
2enz_A	65	NPKC-theta, protein kinase C theta type; zinc bind	1e-07
1ptq_A	50	Protein kinase C delta type; phosphotransferase; 1	1e-07
1rfh_A	59	RAS association (ralgds/AF-6) domain family 5; zin	3e-07
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	7e-07
3ky9_A	587	Proto-oncogene VAV; calponin homology domain, DBL	3e-05
1r79_A	84	Diacylglycerol kinase, delta; C1 domain, cystein-r	4e-05
2vrw_B	406	P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP	5e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05
1kbe_A	49	Kinase suppressor of RAS; KSR, cysteine-rich domai	6e-04

>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 83

 Score = 71.8 bits (176), Expect = 1e-16
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 126 SKKGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTE 185
           S K  K+H   +H FIA      T C +C       L KQGY+CR C+   HK+C  +  
Sbjct: 6   SGKQAKIHYIKNHEFIATFFGQPTFCSVCKD-FVWGLNKQGYKCRQCNAAIHKKCIDKII 64

Query: 186 TTCPHSTIQ 194
             C  +   
Sbjct: 65  GRCTGTAAN 73

>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens} Length = 77

 Score = 69.8 bits (171), Expect = 5e-16
 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 120 AQKNRWSKKGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQ 179
           + + R + K  K+H    H F A   P  T C +C +     L KQGY+CR C+   HK+
Sbjct: 6   SGQRRGAIKQAKVHHVKCHEFTATFFPQPTFCSVCHE-FVWGLNKQGYQCRQCNAAIHKK 64

Query: 180 CHVRTETTCPHS 191
           C  +    C  S
Sbjct: 65  CIDKVIAKCTGS 76

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 65.0 bits (158), Expect = 3e-12
 Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 6/97 (6%)

Query: 128 KGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETT 187
           +   +H   +H F A+     T C  C        GKQG++C+ C    HK+CH     +
Sbjct: 28  RQKNVHEVKNHKFTARFFKQPTFCSHC-TDFIWGFGKQGFQCQVCSFVVHKRCHEFVTFS 86

Query: 188 CPHSTIQHLELNKDRIELRQQNRWSKKGTKLHIFNDH 224
           CP +     +      + R ++++         F DH
Sbjct: 87  CPGA-----DKGPASDDPRSKHKFKIHTYSSPTFCDH 118

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 48.5 bits (115), Expect = 1e-06
 Identities = 16/85 (18%), Positives = 27/85 (31%), Gaps = 1/85 (1%)

Query: 126 SKKGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTE 185
            K        + H F        T C  C   L   L  QG +C  C +  HK+C +   
Sbjct: 91  DKGPASDDPRSKHKFKIHTYSSPTFCDHC-GSLLYGLIHQGMKCDTCMMNVHKRCVMNVP 149

Query: 186 TTCPHSTIQHLELNKDRIELRQQNR 210
           + C     +       +  + ++  
Sbjct: 150 SLCGTDHTERRGRIYIQAHIDREVL 174

>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus} Length = 84

 Score = 54.8 bits (131), Expect = 3e-10
 Identities = 21/65 (32%), Positives = 24/65 (36%), Gaps = 3/65 (4%)

Query: 126 SKKGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRL-GKQGYECRDCHVKCHKQCHVRT 184
            K     H    H FI       T C+ C KPL          ECR CH+KCHK    + 
Sbjct: 15  EKSNYICH--KGHEFIPTLYHFPTNCEACMKPLWHMFKPPPALECRRCHIKCHKDHMDKK 72

Query: 185 ETTCP 189
           E    
Sbjct: 73  EEIIA 77

>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 74

 Score = 49.5 bits (118), Expect = 2e-08
 Identities = 14/66 (21%), Positives = 22/66 (33%), Gaps = 1/66 (1%)

Query: 123 NRWSKKGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHV 182
           +  S +  KL     H F          C +C + +     K G  C++C    H+ C  
Sbjct: 3   SGSSGEPPKLVNDKPHKFKDHFFKKPKFCDVCARMI-VLNNKFGLRCKNCKTNIHEHCQS 61

Query: 183 RTETTC 188
             E   
Sbjct: 62  YVEMQR 67

>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus} Length = 66

 Score = 49.0 bits (117), Expect = 2e-08
 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%)

Query: 138 HTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCP 189
           H F        T C  C   L   + +QG  C +C VKCH++C       C 
Sbjct: 14  HNFEVWTATTPTYCYECEGLL-WGIARQGMRCTECGVKCHEKCQDLLNADCK 64

>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A Length = 52

 Score = 48.2 bits (115), Expect = 3e-08
 Identities = 15/53 (28%), Positives = 20/53 (37%), Gaps = 5/53 (9%)

Query: 136 NDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTC 188
             H F  K       C +C K L       G+ C+ C  K H+ C  +  T C
Sbjct: 2   TTHNFARKTFLKLAFCDICQKFL-----LNGFRCQTCGYKFHEHCSTKVPTMC 49

>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus} Length = 72

 Score = 47.6 bits (113), Expect = 8e-08
 Identities = 13/65 (20%), Positives = 22/65 (33%), Gaps = 8/65 (12%)

Query: 124 RWSKKGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVR 183
           R   +  + H F +             C +C     R + +Q   C +C   CH +C   
Sbjct: 15  RVLAERGEGHRFVELALRGGP----GWCDLC----GREVLRQALRCANCKFTCHSECRSL 66

Query: 184 TETTC 188
            +  C
Sbjct: 67  IQLDC 71

>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 85

 Score = 47.9 bits (114), Expect = 8e-08
 Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 5/71 (7%)

Query: 138 HTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHSTIQHLE 197
           H F        T C  C   L   L  QG +C  C +  HKQC +   + C     +   
Sbjct: 18  HKFKIHTYGSPTFCDHCGSLL-YGLIHQGMKCDTCDMNVHKQCVINVPSLCGMDHTE--- 73

Query: 198 LNKDRIELRQQ 208
             + RI L+ +
Sbjct: 74  -KRGRIYLKAE 83

>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens} Length = 65

 Score = 46.7 bits (111), Expect = 1e-07
 Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 1/52 (1%)

Query: 138 HTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCP 189
           H F   +    T C+ C   L   L +QG +C  C +  H +C  +    C 
Sbjct: 13  HRFKVYNYKSPTFCEHCGTLL-WGLARQGLKCDACGMNVHHRCQTKVANLCG 63

>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A* Length = 50

 Score = 46.3 bits (110), Expect = 1e-07
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 138 HTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTC 188
           H F   +    T C  C   L   L KQG +C DC +  H +C  +    C
Sbjct: 1   HRFKVYNYMSPTFCDHCGSLL-WGLVKQGLKCEDCGMNVHHKCREKVANLC 50

>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus} Length = 59

 Score = 45.6 bits (108), Expect = 3e-07
 Identities = 12/65 (18%), Positives = 22/65 (33%), Gaps = 8/65 (12%)

Query: 124 RWSKKGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVR 183
           R   +  + H F +             C +C +     + +Q   C +C   CH +C   
Sbjct: 2   RVLAERGEGHRFVELALRGGP----GWCDLCGR----EVLRQALRCANCKFTCHSECRSL 53

Query: 184 TETTC 188
            +  C
Sbjct: 54  IQLDC 58

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A Length = 463

 Score = 48.7 bits (116), Expect = 7e-07
 Identities = 16/53 (30%), Positives = 19/53 (35%), Gaps = 1/53 (1%)

Query: 136 NDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTC 188
             H F      G   C+ C       L  QG +C DC +  HKQC       C
Sbjct: 208 KIHNFKVHTFRGPHWCEYCAN-FMWGLIAQGVKCADCGLNVHKQCSKMVPNDC 259

>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A Length = 587

 Score = 43.9 bits (103), Expect = 3e-05
 Identities = 38/199 (19%), Positives = 64/199 (32%), Gaps = 13/199 (6%)

Query: 19  QQQLNNQNNNNNNNKSTLIIHSVQRVDLIRSACQVYLMVFVLND---HCSSVGPLREGSA 75
           Q  + N + +  +     I   ++   + R +       F+L+     C   G   +   
Sbjct: 390 QLSIENLDQSLAHYGRPKIDGELKITSVERRSKMDR-YAFLLDKALLICKRRGDSYDLKD 448

Query: 76  RSSLSEASGVSGASTRTYFNEASTLVLETLENGVKKHYLIPLSLAQKNRW--------SK 127
             +L        +S      + S + L   + G + + L   +   K +W        S 
Sbjct: 449 FVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISN 508

Query: 128 KGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETT 187
              +    N H F        T C   C+ L R    QGY C  C    HK+C  R    
Sbjct: 509 IYPENATANGHDFQMFSFEETTSC-KACQMLLRGTFYQGYRCHRCRASAHKECLGRVPPC 567

Query: 188 CPHSTIQHLELNKDRIELR 206
             H       + KD++  R
Sbjct: 568 GRHGQDFPGTMKKDKLHRR 586

>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1 Length = 84

 Score = 40.4 bits (94), Expect = 4e-05
 Identities = 14/52 (26%), Positives = 19/52 (36%)

Query: 138 HTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCP 189
           H ++  +LP    C +C K     L  Q + C  C    H  C     T C 
Sbjct: 28  HQWLEGNLPVSAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKESLLTKCS 79

>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A Length = 406

 Score = 42.9 bits (101), Expect = 5e-05
 Identities = 35/173 (20%), Positives = 57/173 (32%), Gaps = 13/173 (7%)

Query: 19  QQQLNNQNNNNNNNKSTLIIHSVQRVDLIRSACQVYLMVFVLND---HCSSVGPLREGSA 75
           Q  + N + +  N     I   ++   + R +       F+L+     C   G   +  A
Sbjct: 218 QLSIENLDQSLANYGRPKIDGELKITSVERRSKT-DRYAFLLDKALLICKRRGDSYDLKA 276

Query: 76  RSSLSEASGVSGASTRTYFNEASTLVLETLENGVKKHYLIPLSLAQKNRW--------SK 127
             +L        +S      + S + L   + G + + L   +   K +W        S 
Sbjct: 277 SVNLHSFQVRDDSSGERDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISN 336

Query: 128 KGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQC 180
              +    N H F        T C+ C   L R    QGY C  C    HK+C
Sbjct: 337 IYPENATANGHDFQMFSFEETTSCKACQMLL-RGTFYQGYRCYRCRAPAHKEC 388

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 6e-05
 Identities = 30/218 (13%), Positives = 57/218 (26%), Gaps = 56/218 (25%)

Query: 45  DLIRSACQVYLMVFVLNDHCSSVGP-LREGSARSSLSEASGVSGASTRTYFNEASTLVLE 103
           DL R                S +   +R+G A     +       +T     E+S  VLE
Sbjct: 317 DLPREVLTTNPR------RLSIIAESIRDGLATWDNWKHVNCDKLTT---IIESSLNVLE 367

Query: 104 TLENGVKKHYLIPLSLAQKNRWSKKGTKLHIFNDHTFIAKHL------------PGGTVC 151
             E   +K +                 +L +F     I   L                V 
Sbjct: 368 PAE--YRKMF----------------DRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVN 409

Query: 152 QMCCKPLARRLGKQG-YECRDCHVKCHKQCHVRTETTCPHSTIQHLELNKDRIELRQQNR 210
           ++    L  +  K+        +++   +          H +I         ++     +
Sbjct: 410 KLHKYSLVEKQPKESTISIPSIYLELKVKLENEYAL---HRSI---------VDHYNIPK 457

Query: 211 WSKKGTKLHIFND---HTFIAKHLPGTLYTNSPFYFRR 245
                  +  + D   ++ I  HL    +      FR 
Sbjct: 458 TFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRM 495

>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A Length = 49

 Score = 36.1 bits (83), Expect = 6e-04
 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 11/53 (20%)

Query: 129 GTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCH 181
           G+  H F+  ++++       VC +C K +       G +C+ C +KCH +C 
Sbjct: 1   GSVTHRFSTKSWLS------QVCNVCQKSMI-----FGVKCKHCRLKCHNKCT 42

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	252
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.8
2enn_A	77	NPKC-theta, protein kinase C theta type; zinc bind	99.77
2yuu_A	83	NPKC-delta, protein kinase C delta type; metal bin	99.76
3uej_A	65	NPKC-delta, protein kinase C delta type; proteine	99.7
2enz_A	65	NPKC-theta, protein kinase C theta type; zinc bind	99.69
2db6_A	74	SH3 and cysteine rich domain 3; STAC3, C1 domain,	99.66
1y8f_A	66	UNC-13 homolog A, MUNC13-1; cysteine-rich domain,	99.64
1ptq_A	50	Protein kinase C delta type; phosphotransferase; 1	99.64
2eli_A	85	Protein kinase C alpha type; PKC-alpha, PKC-A, str	99.63
2row_A	84	RHO-associated protein kinase 2; ATP-binding, coil	99.63
1faq_A	52	RAF-1; transferase, serine/threonine-protein kinas	99.51
4b6d_A	61	RAC GTPase-activating protein 1; signaling protein	99.48
1rfh_A	59	RAS association (ralgds/AF-6) domain family 5; zin	99.46
2fnf_X	72	Putative RAS effector NORE1; zinc, signal transduc	99.45
1kbe_A	49	Kinase suppressor of RAS; KSR, cysteine-rich domai	99.15
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	99.13
3ky9_A	587	Proto-oncogene VAV; calponin homology domain, DBL	99.12
2vrw_B	406	P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP	99.08
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	98.72
1vd2_A	89	Protein kinase C, IOTA type; PB1 domain, OPCA moti	98.36
1r79_A	84	Diacylglycerol kinase, delta; C1 domain, cystein-r	97.87
2enz_A	65	NPKC-theta, protein kinase C theta type; zinc bind	97.12
2eli_A	85	Protein kinase C alpha type; PKC-alpha, PKC-A, str	96.47
1rfh_A	59	RAS association (ralgds/AF-6) domain family 5; zin	96.31
2fnf_X	72	Putative RAS effector NORE1; zinc, signal transduc	96.27
1y8f_A	66	UNC-13 homolog A, MUNC13-1; cysteine-rich domain,	95.71
1ptq_A	50	Protein kinase C delta type; phosphotransferase; 1	95.52
1faq_A	52	RAF-1; transferase, serine/threonine-protein kinas	95.25
3uej_A	65	NPKC-delta, protein kinase C delta type; proteine	95.17
2yuu_A	83	NPKC-delta, protein kinase C delta type; metal bin	95.15
2db6_A	74	SH3 and cysteine rich domain 3; STAC3, C1 domain,	94.7
1kbe_A	49	Kinase suppressor of RAS; KSR, cysteine-rich domai	94.66
2enn_A	77	NPKC-theta, protein kinase C theta type; zinc bind	94.51
2row_A	84	RHO-associated protein kinase 2; ATP-binding, coil	93.91
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	93.1
4b6d_A	61	RAC GTPase-activating protein 1; signaling protein	91.4
1v5n_A	89	PDI-like hypothetical protein AT1G60420; DC1 domai	90.6
1r79_A	84	Diacylglycerol kinase, delta; C1 domain, cystein-r	88.47

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.80  E-value=5.6e-21  Score=189.29  Aligned_cols=106  Identities=23%  Similarity=0.406  Sum_probs=23.7

Q ss_pred             cCcceeecCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCCCcccccccchhhhcccc
Q psy1485         128 KGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHSTIQHLELNKDRIELRQ  207 (252)
Q Consensus       128 k~~klh~~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~s~~~~el~~~r~~ir~  207 (252)
                      +.+++|.+++|.|.+++|.+||||++|+++|| |+++|||+|.+|+++||++|+.+|+..|++......     ....++
T Consensus        28 ~~~~~~~~~~H~f~~~~~~~p~~C~~C~~~i~-g~~~qg~~C~~C~~~~H~~C~~~v~~~c~~~~~~~~-----~~~~~~  101 (674)
T 3pfq_A           28 RQKNVHEVKNHKFTARFFKQPTFCSHCTDFIW-GFGKQGFQCQVCSFVVHKRCHEFVTFSCPGADKGPA-----SDDPRS  101 (674)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccCCcccCCceEEeeeCCCCCcccccccccc-ccCCceeECCCCCCCcChhhcCcCcccCCCcccccc-----cccccC
Confidence            34578999999999999999999999999997 999999999999999999999999999988765332     234568


Q ss_pred             ccccccCCccccccccccccccc-cCCcccccC
Q psy1485         208 QNRWSKKGTKLHIFNDHTFIAKH-LPGTLYTNS  239 (252)
Q Consensus       208 PHrf~~~~y~sptFCdHCF~ak~-L~g~~~~~~  239 (252)
                      +|+|..++|..|+||+||...+. +...+|+|.
T Consensus       102 ~h~~~~~~~~~~~~C~~C~~~l~g~~~qg~~C~  134 (674)
T 3pfq_A          102 KHKFKIHTYSSPTFCDHCGSLLYGLIHQGMKCD  134 (674)
T ss_dssp             CCCCCEECCSSCCCCSSSCSCCBBSSSCEECCS
T ss_pred             CcceeecCCCCCCCCCccccccchhhcCccccc
Confidence            99999999999999999964322 222455554

>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}

Probab=99.77  E-value=2.6e-19  Score=134.06  Aligned_cols=68  Identities=35%  Similarity=0.670  Sum_probs=62.9

Q ss_pred             ccccccCcceeecCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCCC
Q psy1485         123 NRWSKKGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHS  191 (252)
Q Consensus       123 ~~~~~k~~klh~~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~  191 (252)
                      .+++.|+++++..++|.|.+++|..||+|++|.++|| |+++|||+|++|+++||++|+.+|+.+|.+.
T Consensus         9 r~ga~r~~~~~~~~~H~F~~~~f~~pt~C~~C~~~lw-Gl~kqG~~C~~C~~~~Hk~C~~~v~~~C~~~   76 (77)
T 2enn_A            9 RRGAIKQAKVHHVKCHEFTATFFPQPTFCSVCHEFVW-GLNKQGYQCRQCNAAIHKKCIDKVIAKCTGS   76 (77)
T ss_dssp             CCCCCCCCCCEESSSCEEEEECCSSCEECSSSCCEEC-CTTCCEEECSSSCCEEESGGGSSCCSCCCCC
T ss_pred             cCccccccccccCCCCccEEEcCCCCcCccccChhhc-cccccccCcCCCCCcCCHhHHhhCcCCCCCC
Confidence            3455567799999999999999999999999999997 9999999999999999999999999999875

>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.76  E-value=5.2e-19  Score=133.94  Aligned_cols=71  Identities=32%  Similarity=0.614  Sum_probs=65.3

Q ss_pred             ccccCcceeecCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCCCccccc
Q psy1485         125 WSKKGTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHSTIQHL  196 (252)
Q Consensus       125 ~~~k~~klh~~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~s~~~~  196 (252)
                      .+.++.++|.+++|.|.+++|.+|++|++|+++|| |+++|||+|.+|+++||++|+.+|+..|......+.
T Consensus         5 ~a~r~~k~~~~~~H~F~~~~~~~pt~C~~C~~~lw-Gl~kqg~~C~~C~~~~Hk~C~~~v~~~C~~~~~~~~   75 (83)
T 2yuu_A            5 SSGKQAKIHYIKNHEFIATFFGQPTFCSVCKDFVW-GLNKQGYKCRQCNAAIHKKCIDKIIGRCTGTAANSR   75 (83)
T ss_dssp             CCCCCCCEECGGGCCEEEECCSSCCCCSSSCCCCC-SSSCCEEEETTTCCEECTTGGGTCCSCCSSCCCCCS
T ss_pred             cccchhhCcccCCCceEeEeCCCCcChhhcChhhc-cccccccccCCcCCeeChhhhhhCCCcCCCccccCc
Confidence            34567889999999999999999999999999997 999999999999999999999999999998877553

>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*

Probab=99.70  E-value=2.6e-18  Score=124.28  Aligned_cols=61  Identities=26%  Similarity=0.547  Sum_probs=57.7

Q ss_pred             cceeecCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCCC
Q psy1485         130 TKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHS  191 (252)
Q Consensus       130 ~klh~~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~  191 (252)
                      .+++.+++|.|.+++|.+|++|++|+++|| |+++|||+|.+|+++||++|+.+|+.+|+..
T Consensus         2 ~~~~~~~~H~F~~~~~~~pt~C~~C~~~l~-Gl~~qg~~C~~C~~~~Hk~C~~~v~~~C~~~   62 (65)
T 3uej_A            2 SRRASVGSHRFKVYNYMSPTFCDHCGSLLW-GLVKQGLKCEDCGMNVHHKCREKVANLCEFI   62 (65)
T ss_dssp             CCCEEEEECCEEEECCSSCCBCTTTCCBCC-SSSSCEEEETTTCCEECHHHHTTSCSEEEEE
T ss_pred             ccceEeCCceEEeEeCCCCCcccccChhhh-ccCceeeECCCCCCeEchhHhhhCCCcCCCc
Confidence            467899999999999999999999999997 9999999999999999999999999999754

>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}

Probab=99.69  E-value=1.3e-17  Score=120.71  Aligned_cols=60  Identities=25%  Similarity=0.530  Sum_probs=56.0

Q ss_pred             cceeecCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCC
Q psy1485         130 TKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPH  190 (252)
Q Consensus       130 ~klh~~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~  190 (252)
                      .+++...+|.|.+++|.+||+|++|+++|| |+++|||+|++|+++||++|+.+|+..|+.
T Consensus         5 ~~~~~~~~H~F~~~~~~~pt~C~~C~~~l~-Gl~~qg~~C~~C~~~~Hk~C~~~v~~~C~~   64 (65)
T 2enz_A            5 SSGKIDMPHRFKVYNYKSPTFCEHCGTLLW-GLARQGLKCDACGMNVHHRCQTKVANLCGI   64 (65)
T ss_dssp             CCCCCCCCCCEEECCCCSCCBCSSSCCBCC-CSSSCSEEESSSCCEECTTTTTTSCSCTTT
T ss_pred             ccCCCCCCCccEeEcCCCCcCchhcChhhe-ecCCcccccCCCCCccCHhHHhhCcCcCCC
Confidence            356677899999999999999999999997 999999999999999999999999999974

>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.66  E-value=2.1e-17  Score=122.77  Aligned_cols=62  Identities=23%  Similarity=0.548  Sum_probs=57.5

Q ss_pred             cceeecCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccc-cCCCCc
Q psy1485         130 TKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTET-TCPHST  192 (252)
Q Consensus       130 ~klh~~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~-~C~~~s  192 (252)
                      .+++...+|.|++++|.+||+|++|+++|| |+++|||+|++|+++||++|+.+|+. +|.+..
T Consensus        10 ~k~~~~~~H~F~~~~f~~pt~C~~C~~~lw-Gl~kqG~~C~~C~~~~Hk~C~~~v~~~~C~~~~   72 (74)
T 2db6_A           10 PKLVNDKPHKFKDHFFKKPKFCDVCARMIV-LNNKFGLRCKNCKTNIHEHCQSYVEMQRCSGPS   72 (74)
T ss_dssp             CCCSCSSBCCEEEEECSSCEECSSSCCEEC-HHHHEEEEESSSCCEECTTTTGGGSSSBCCCCC
T ss_pred             cccccCCCCceEEeeCCCCcCchhcChhhc-cccCCccccCCCCCccChhHHhhCCCCcCCCCC
Confidence            467788999999999999999999999997 99999999999999999999999996 698754

>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}

Probab=99.64  E-value=6.4e-17  Score=117.53  Aligned_cols=58  Identities=28%  Similarity=0.477  Sum_probs=50.2

Q ss_pred             eeecCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCC
Q psy1485         132 LHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPH  190 (252)
Q Consensus       132 lh~~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~  190 (252)
                      +....+|.|.+++|.+||+|++|+++|| |+.+|||+|++|+++||++|+.+|+.+|.+
T Consensus         8 ~~~~~~H~F~~~~~~~pt~C~~C~~~l~-Gl~~qg~~C~~C~~~~Hk~C~~~v~~~C~~   65 (66)
T 1y8f_A            8 GGGGIQHNFEVWTATTPTYCYECEGLLW-GIARQGMRCTECGVKCHEKCQDLLNADCKL   65 (66)
T ss_dssp             -----CCCEEEEECSSCCCCTTTCCCCC-SSCCEEEEETTTCCEECTTHHHHSCCCC--
T ss_pred             CCCCCCcccEeeeCCCCcChhhcChhhc-ccCcceeEcCCCCCeeCHHHHhhCcCcCCC
Confidence            3456799999999999999999999997 999999999999999999999999999975

>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*

Probab=99.64  E-value=6.9e-17  Score=110.52  Aligned_cols=50  Identities=32%  Similarity=0.679  Sum_probs=48.5

Q ss_pred             CeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccC
Q psy1485         138 HTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTC  188 (252)
Q Consensus       138 H~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C  188 (252)
                      |.|.+++|.+|++|++|+++|| |+++|||+|++|++++|++|+.+|+..|
T Consensus         1 H~F~~~~~~~pt~C~~C~~~l~-g~~~qg~~C~~C~~~~H~~C~~~v~~~C   50 (50)
T 1ptq_A            1 HRFKVYNYMSPTFCDHCGSLLW-GLVKQGLKCEDCGMNVHHKCREKVANLC   50 (50)
T ss_dssp             CCEEEECCSSCCBCTTTCCBCC-SSSSCEEEETTTCCEECHHHHTTSCSCC
T ss_pred             CCCEeecCCCCCCcCCCCceee-ccCCccCEeCCCCCeECHHHhhhcCCCC
Confidence            8999999999999999999997 9999999999999999999999999887

>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.63  E-value=1.6e-16  Score=120.86  Aligned_cols=61  Identities=26%  Similarity=0.524  Sum_probs=56.4

Q ss_pred             eecCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCCCccc
Q psy1485         133 HIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHSTIQ  194 (252)
Q Consensus       133 h~~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~s~~  194 (252)
                      ....+|.|.+++|.+|++|++|+++|| |+.+|||+|.+|+++||++|+.+|+..|......
T Consensus        13 ~~~~~H~F~~~~~~~pt~C~~C~~~l~-Gl~kqG~~C~~C~~~~Hk~C~~~v~~~C~~~~~e   73 (85)
T 2eli_A           13 DPRSKHKFKIHTYGSPTFCDHCGSLLY-GLIHQGMKCDTCDMNVHKQCVINVPSLCGMDHTE   73 (85)
T ss_dssp             CTTTSCCCEEECCSSCCBCSSSCCBCC-CSSSCEEECSSSCCEEETTTTTTSCSCCCCCCCC
T ss_pred             CCCCCcccEeeeCCCCcCCcccCcccc-ccccCCCcCCCcCCccCHhHHhhcCCcCCcchhh
Confidence            456799999999999999999999997 9999999999999999999999999999876553

>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}

Probab=99.63  E-value=8.7e-17  Score=123.05  Aligned_cols=61  Identities=33%  Similarity=0.589  Sum_probs=56.4

Q ss_pred             cceeecCCCeEEEEecCCCCcCCCCCCccccccccc--ccccCCccccccccccc---cccccCCCC
Q psy1485         130 TKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQ--GYECRDCHVKCHKQCHV---RTETTCPHS  191 (252)
Q Consensus       130 ~klh~~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQ--GyqC~~Ck~~cHKKC~~---~V~~~C~~~  191 (252)
                      ..+....+|.|.+++|.+||+|++|+++|| |+++|  ||+|++|+++|||+|+.   .|+..|...
T Consensus        17 ~~~~~~~~H~F~~~~~~~PT~Cd~C~~~lW-Gl~kqp~G~~C~~C~~~~HkrC~~k~~~v~~~C~~~   82 (84)
T 2row_A           17 SNYICHKGHEFIPTLYHFPTNCEACMKPLW-HMFKPPPALECRRCHIKCHKDHMDKKEEIIAPCKVY   82 (84)
T ss_dssp             CCCEEETTEEEEEECCSSCEECSSSSSEEC-CSSSCCCEEEESSSCCEEEHHHHHHTCTTCCCCSTT
T ss_pred             cceEEcCCcceEeEcCCCCcchhhcCHhhh-ccccCCCCCEecCCCCccchhHhCCccccccccCcC
Confidence            456788999999999999999999999997 99998  99999999999999999   799999753

>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A

Probab=99.51  E-value=6.9e-15  Score=101.40  Aligned_cols=51  Identities=29%  Similarity=0.717  Sum_probs=48.5

Q ss_pred             cCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCC
Q psy1485         135 FNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPH  190 (252)
Q Consensus       135 ~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~  190 (252)
                      +++|.|.+++|.+|++|++|+++||     |||+|++|++++|++|..+|+.+|.+
T Consensus         1 ~~~H~F~~~~~~~pt~C~~C~~~l~-----qG~~C~~C~~~~H~~C~~~v~~~C~~   51 (52)
T 1faq_A            1 LTTHNFARKTFLKLAFCDICQKFLL-----NGFRCQTCGYKFHEHCSTKVPTMCVD   51 (52)
T ss_dssp             CCCCCCEEECCSSCEECTTSSSEEC-----SEEECTTTTCCBCSTTSSSSSSCCCC
T ss_pred             CCCceeEeEeCCCCcCCCCcccccc-----cCCEeCCCCCeEChhHHhhCcCcCCC
Confidence            4689999999999999999999996     99999999999999999999999975

>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}

Probab=99.48  E-value=2.5e-14  Score=103.16  Aligned_cols=58  Identities=31%  Similarity=0.654  Sum_probs=52.6

Q ss_pred             eeecCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCCC
Q psy1485         132 LHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHS  191 (252)
Q Consensus       132 lh~~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~  191 (252)
                      +-...+|+|++++|.+|++|++|++.|  ++++|||+|.+|++.||++|+..++.+|...
T Consensus         3 ~~~~~~H~F~~kt~~~~~~C~~Cg~~i--~~gkq~~kC~dC~~~cH~~C~~~~~~~C~p~   60 (61)
T 4b6d_A            3 LGSMRLHDFVSKTVIKPESCVPCGKRI--KFGKLSLKCRDCRVVSHPECRDRCPLPCIPT   60 (61)
T ss_dssp             EECBCCCCEEEEECCSCEECTTTCCEE--CTTCEEEEESSSSCEECGGGGGGSCSSCCCC
T ss_pred             CCcccceeEEeeeccCCcccccccCEE--EEeeEeeECCCCCCeEchhHhhcCCCCCCCC
Confidence            345679999999999999999999977  4899999999999999999999999999763

>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}

Probab=99.46  E-value=1.4e-14  Score=103.27  Aligned_cols=53  Identities=23%  Similarity=0.626  Sum_probs=49.2

Q ss_pred             eecCCCeEEE-EecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCC
Q psy1485         133 HIFNDHTFIA-KHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCP  189 (252)
Q Consensus       133 h~~~gH~F~a-~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~  189 (252)
                      ....+|.|.+ ++|.+||+|++|+++|    ++|||+|++|+++||++|+.+|+..|.
T Consensus         6 ~~~~~H~F~~~~~~~~pt~C~~C~~~i----~kqg~kC~~C~~~cH~kC~~~v~~~C~   59 (59)
T 1rfh_A            6 ERGEGHRFVELALRGGPGWCDLCGREV----LRQALRCANCKFTCHSECRSLIQLDCR   59 (59)
T ss_dssp             CCCSSCCCEECCCSSCCEECTTTCSEE----CSCCEECTTTSCEECHHHHTTCCCCCC
T ss_pred             cCCCCCcCeeeeccCCCeEchhcchhh----hhCccEeCCCCCeEehhhhhhCcCCCC
Confidence            4567999999 9999999999999988    389999999999999999999999984

>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}

Probab=99.45  E-value=3.8e-14  Score=105.07  Aligned_cols=52  Identities=23%  Similarity=0.636  Sum_probs=48.5

Q ss_pred             ecCCCeEEE-EecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCC
Q psy1485         134 IFNDHTFIA-KHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCP  189 (252)
Q Consensus       134 ~~~gH~F~a-~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~  189 (252)
                      ...+|.|.+ ++|.+||+|++|+++|    ++|||+|.+|+++||++|+.+|+..|.
T Consensus        20 ~~~~H~F~~~~~~~~pt~C~~C~~~l----~~qG~kC~~C~~~cHkkC~~~V~~~C~   72 (72)
T 2fnf_X           20 RGEGHRFVELALRGGPGWCDLCGREV----LRQALRCANCKFTCHSECRSLIQLDCR   72 (72)
T ss_dssp             GCSSCCCEECCCCSSCCBCTTTSSBC----SSCCEECTTSSCEECTGGGGGCCSCCC
T ss_pred             cCCCCccceeecCCCCcchhhhhHHH----HhCcCccCCCCCeechhhhccCcCCCC
Confidence            457999999 9999999999999988    489999999999999999999999984

>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A

Probab=99.15  E-value=2e-11  Score=84.47  Aligned_cols=45  Identities=31%  Similarity=0.799  Sum_probs=41.0

Q ss_pred             CCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccc
Q psy1485         136 NDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTET  186 (252)
Q Consensus       136 ~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~  186 (252)
                      .+|+|..++|. +++|++|+++||     |||+|++|+++||++|..+||.
T Consensus         3 i~HrF~~~t~~-~t~C~~C~k~i~-----~G~kC~~Ck~~cH~kC~~~vp~   47 (49)
T 1kbe_A            3 VTHRFSTKSWL-SQVCNVCQKSMI-----FGVKCKHCRLKCHNKCTKEAPA   47 (49)
T ss_dssp             CCCCEEEECCS-SCCCSSSCCSSC-----CEEEETTTTEEESSSCTTTSCC
T ss_pred             CCcccCccCCC-CcCccccCceeE-----CcCCCCCCCCccchhhcCcCCC
Confidence            58999999998 599999999997     6899999999999999997764

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=99.13  E-value=6.7e-12  Score=120.02  Aligned_cols=92  Identities=22%  Similarity=0.312  Sum_probs=67.2

Q ss_pred             ecCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCCCcccccccchhhhcccccccccc
Q psy1485         134 IFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHSTIQHLELNKDRIELRQQNRWSK  213 (252)
Q Consensus       134 ~~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~s~~~~el~~~r~~ir~PHrf~~  213 (252)
                      ...+|.|..++|.+|++|++|+++|| |+.+||++|.+|+++||++|...++..|+......    ...|...+-...+.
T Consensus       206 iv~~h~f~~~~~~~pt~C~~C~~~l~-g~~~qg~~C~~C~~~~Hk~C~~~vp~~C~~~~~~~----~~vFG~~L~~~~~~  280 (463)
T 3cxl_A          206 YEKIHNFKVHTFRGPHWCEYCANFMW-GLIAQGVKCADCGLNVHKQCSKMVPNDCKPDLKHV----KKVYSCDLTTLVKA  280 (463)
T ss_dssp             -CBCCCEEEECCSSCCBCTTTCCBCC-SSSCCEEEETTTCCEECHHHHTTSCSBCCGGGGGC----CCCTTSCHHHHHHH
T ss_pred             cCCCcceEEeecCCCCcchhhhhhhh-hHHhcCeeccccCcccccccccccccccccccccc----ccccccccchhhhc
Confidence            57899999999999999999999997 99999999999999999999999999998654321    11222222222222


Q ss_pred             CCccccccccccccccc
Q psy1485         214 KGTKLHIFNDHTFIAKH  230 (252)
Q Consensus       214 ~~y~sptFCdHCF~ak~  230 (252)
                      .....|.+-..|.-.++
T Consensus       281 ~~~~vP~iv~~~i~~le  297 (463)
T 3cxl_A          281 HTTKRPMVVDMCIREIE  297 (463)
T ss_dssp             HTCSSCHHHHHHHHHHH
T ss_pred             cCCCCCeeHHHHHHHHH
Confidence            23456666666654443

>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A

Probab=99.12  E-value=2.1e-11  Score=119.17  Aligned_cols=60  Identities=28%  Similarity=0.512  Sum_probs=51.0

Q ss_pred             eecCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCCCccc
Q psy1485         133 HIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHSTIQ  194 (252)
Q Consensus       133 h~~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~s~~  194 (252)
                      ...++|.|..+.|.+||+|++|+++|| |+++|||+|..|+++||++|+..| ..|++.+..
T Consensus       514 ~~~~~H~F~~~~~~~~t~C~~C~~~l~-gl~~qg~~C~~C~~~vHk~C~~~v-~~C~~~~~~  573 (587)
T 3ky9_A          514 ATANGHDFQMFSFEETTSCKACQMLLR-GTFYQGYRCHRCRASAHKECLGRV-PPCGRHGQD  573 (587)
T ss_dssp             TTGGGCCEEEECCSSCCBCTTTCSBCC-SSSCCEEEETTTCCEECSGGGGGS-CCC------
T ss_pred             ccccCCceeEEeCCCCccccccccccc-ccccCCcCCCCCCCccchhhhhcC-CCCCCCCcc
Confidence            356899999999999999999999997 999999999999999999999999 489877653

>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A

Probab=99.08  E-value=4.5e-11  Score=111.26  Aligned_cols=58  Identities=29%  Similarity=0.508  Sum_probs=50.7

Q ss_pred             ecCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCCCcc
Q psy1485         134 IFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHSTI  193 (252)
Q Consensus       134 ~~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~s~  193 (252)
                      ...+|.|..+.+..||+|.+|+.++| |+.+||++|+.|+++||++|+.+|+. |++...
T Consensus       343 ~~~~h~f~~~~~~~~t~C~~C~~~~~-g~~~qg~~C~~C~~~~h~~C~~~~~~-C~~~~~  400 (406)
T 2vrw_B          343 TANGHDFQMFSFEETTSCKACQMLLR-GTFYQGYRCYRCRAPAHKECLGRVPP-CGRHGQ  400 (406)
T ss_dssp             TGGGCCEEEECCSSCCBCTTTCCBCC-SSSSCEEEETTTCCEECGGGGGGSCC-C-----
T ss_pred             cCCCCCCccccCCCCCCCccccchhc-eeCCCCCCCCCCcCccchhhhhhCCC-CCCCch
Confidence            46789999999999999999999997 99999999999999999999999995 987643

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=98.72  E-value=5.7e-09  Score=103.35  Aligned_cols=56  Identities=27%  Similarity=0.571  Sum_probs=51.7

Q ss_pred             cCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCCC
Q psy1485         135 FNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHS  191 (252)
Q Consensus       135 ~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~  191 (252)
                      ...|.|..+.|..+++|++|+.+|| |+.+|||+|..|++++|++|...|+..|...
T Consensus       100 ~~~h~~~~~~~~~~~~C~~C~~~l~-g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~d  155 (674)
T 3pfq_A          100 RSKHKFKIHTYSSPTFCDHCGSLLY-GLIHQGMKCDTCMMNVHKRCVMNVPSLCGTD  155 (674)
T ss_dssp             --CCCCCEECCSSCCCCSSSCSCCB-BSSSCEECCSSSCCCBCSSTTSSSCCCSSSC
T ss_pred             cCCcceeecCCCCCCCCCccccccc-hhhcCccccccCCcchhhhhhhccCcccccc
Confidence            4689999999999999999999997 9999999999999999999999999999754

>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A

Probab=98.36  E-value=5e-08  Score=75.15  Aligned_cols=53  Identities=21%  Similarity=0.358  Sum_probs=46.5

Q ss_pred             hHHHHHHHhH-----hhhhhhccCCCCCCCCCCCCCcccchhhhhccccCCccccccccccceeeeecc
Q psy1485          43 RVDLIRSACQ-----VYLMVFVLNDHCSSVGPLREGSARSSLSEASGVSGASTRTYFNEASTLVLETLE  106 (252)
Q Consensus        43 ~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~s~~~~Lseas~~s~~~~~~~~~~~s~L~le~~~  106 (252)
                      =.++||++|.     +|||+|+|||     |+|.++|++++|+||+++++      ++.+++|.||.++
T Consensus        31 L~~kv~~~~~~~~~~~f~lky~DEe-----GD~itisSd~EL~eAl~l~~------~n~~~~l~ihvf~   88 (89)
T 1vd2_A           31 LCNEVRDMCSFDNEQLFTMKWIDEE-----GDPCTVSSQLELEEAFRLYE------LNKDSELLIHVFP   88 (89)
T ss_dssp             HHHHHHHHTTCCSSCCEEEEECCSS-----SCCEECCSHHHHHHHHHHHH------HTSCCCEEEEEEE
T ss_pred             HHHHHHHHhCCCCCCeEEEEEECCC-----CCcccccCHHHHHHHHHHHH------ccCCCCEEEEEcc
Confidence            3578999994     5999999965     55668999999999999999      8999999999986

>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1

Probab=97.87  E-value=7.1e-06  Score=62.43  Aligned_cols=58  Identities=24%  Similarity=0.499  Sum_probs=50.9

Q ss_pred             cCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCCCc
Q psy1485         135 FNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHST  192 (252)
Q Consensus       135 ~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~s  192 (252)
                      ...|.|+.-.+...++|++|.+.++..++-+|++|.-|++.+|.+|+..++..|....
T Consensus        25 ~~~H~WveGNl~~~s~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~~~~~~eC~lG~   82 (84)
T 1r79_A           25 AMPHQWLEGNLPVSAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKESLLTKCSGPS   82 (84)
T ss_dssp             CBCCCEEESCCCTTCBCSSSCCBCCCTTTCCCEEESSSCCEECHHHHHHCCSCBCCSC
T ss_pred             cceeeEEccCCCCCCEeCCCCCEeCCccCCCCCCCcccChhHHHHHHHhccCcCCCCC
Confidence            4579999998888999999999997446669999999999999999999999997543

>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}

Probab=97.12  E-value=0.0002  Score=51.05  Aligned_cols=41  Identities=12%  Similarity=0.022  Sum_probs=32.5

Q ss_pred             hhhhccccccccccCCccccccccccccccc-cCCcccccCC
Q psy1485         200 KDRIELRQQNRWSKKGTKLHIFNDHTFIAKH-LPGTLYTNSP  240 (252)
Q Consensus       200 ~~r~~ir~PHrf~~~~y~sptFCdHCF~ak~-L~g~~~~~~~  240 (252)
                      ..++++..+|+|.+++|..||||+||...+| +...+|++++
T Consensus         4 ~~~~~~~~~H~F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~   45 (65)
T 2enz_A            4 GSSGKIDMPHRFKVYNYKSPTFCEHCGTLLWGLARQGLKCDA   45 (65)
T ss_dssp             SCCCCCCCCCCEEECCCCSCCBCSSSCCBCCCSSSCSEEESS
T ss_pred             cccCCCCCCCccEeEcCCCCcCchhcChhheecCCcccccCC
Confidence            4567788999999999999999999987766 3345666654

>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.47  E-value=0.0015  Score=49.06  Aligned_cols=38  Identities=13%  Similarity=-0.011  Sum_probs=29.4

Q ss_pred             hccccccccccCCccccccccccccccc-cCCcccccCC
Q psy1485         203 IELRQQNRWSKKGTKLHIFNDHTFIAKH-LPGTLYTNSP  240 (252)
Q Consensus       203 ~~ir~PHrf~~~~y~sptFCdHCF~ak~-L~g~~~~~~~  240 (252)
                      .....+|+|..++|..||||+||...+| +...+|++++
T Consensus        12 ~~~~~~H~F~~~~~~~pt~C~~C~~~l~Gl~kqG~~C~~   50 (85)
T 2eli_A           12 DDPRSKHKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCDT   50 (85)
T ss_dssp             CCTTTSCCCEEECCSSCCBCSSSCCBCCCSSSCEEECSS
T ss_pred             CCCCCCcccEeeeCCCCcCCcccCccccccccCCCcCCC
Confidence            3567899999999999999999976665 2335666654

>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}

Probab=96.31  E-value=0.0016  Score=45.75  Aligned_cols=34  Identities=6%  Similarity=-0.197  Sum_probs=27.1

Q ss_pred             ccccccccc-CCccccccccccccccccCCcccccCC
Q psy1485         205 LRQQNRWSK-KGTKLHIFNDHTFIAKHLPGTLYTNSP  240 (252)
Q Consensus       205 ir~PHrf~~-~~y~sptFCdHCF~ak~L~g~~~~~~~  240 (252)
                      ...+|+|.+ ++|..||||+||.-.+  ...+|++.+
T Consensus         7 ~~~~H~F~~~~~~~~pt~C~~C~~~i--~kqg~kC~~   41 (59)
T 1rfh_A            7 RGEGHRFVELALRGGPGWCDLCGREV--LRQALRCAN   41 (59)
T ss_dssp             CCSSCCCEECCCSSCCEECTTTCSEE--CSCCEECTT
T ss_pred             CCCCCcCeeeeccCCCeEchhcchhh--hhCccEeCC
Confidence            357999999 9999999999997666  345567665

>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}

Probab=96.27  E-value=0.002  Score=47.17  Aligned_cols=34  Identities=6%  Similarity=-0.197  Sum_probs=27.6

Q ss_pred             ccccccccc-CCccccccccccccccccCCcccccCC
Q psy1485         205 LRQQNRWSK-KGTKLHIFNDHTFIAKHLPGTLYTNSP  240 (252)
Q Consensus       205 ir~PHrf~~-~~y~sptFCdHCF~ak~L~g~~~~~~~  240 (252)
                      ...+|+|.+ ++|..||||+||.-.+  ...+|++.+
T Consensus        20 ~~~~H~F~~~~~~~~pt~C~~C~~~l--~~qG~kC~~   54 (72)
T 2fnf_X           20 RGEGHRFVELALRGGPGWCDLCGREV--LRQALRCAN   54 (72)
T ss_dssp             GCSSCCCEECCCCSSCCBCTTTSSBC--SSCCEECTT
T ss_pred             cCCCCccceeecCCCCcchhhhhHHH--HhCcCccCC
Confidence            568999999 9999999999997666  345567764

>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}

Probab=95.71  E-value=0.0031  Score=44.94  Aligned_cols=38  Identities=3%  Similarity=-0.249  Sum_probs=25.9

Q ss_pred             hccccccccccCCccccccccccccccc-cCCcccccCC
Q psy1485         203 IELRQQNRWSKKGTKLHIFNDHTFIAKH-LPGTLYTNSP  240 (252)
Q Consensus       203 ~~ir~PHrf~~~~y~sptFCdHCF~ak~-L~g~~~~~~~  240 (252)
                      .....+|+|..++|..||||+||...+| +...+|++.+
T Consensus         8 ~~~~~~H~F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~   46 (66)
T 1y8f_A            8 GGGGIQHNFEVWTATTPTYCYECEGLLWGIARQGMRCTE   46 (66)
T ss_dssp             -----CCCEEEEECSSCCCCTTTCCCCCSSCCEEEEETT
T ss_pred             CCCCCCcccEeeeCCCCcChhhcChhhcccCcceeEcCC
Confidence            3456899999999999999999976665 2235566654

>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*

Probab=95.52  E-value=0.0053  Score=40.91  Aligned_cols=32  Identities=16%  Similarity=-0.019  Sum_probs=25.1

Q ss_pred             cccccCCccccccccccccccc-cCCcccccCC
Q psy1485         209 NRWSKKGTKLHIFNDHTFIAKH-LPGTLYTNSP  240 (252)
Q Consensus       209 Hrf~~~~y~sptFCdHCF~ak~-L~g~~~~~~~  240 (252)
                      |+|.+++|..||||+||...++ +...+|++++
T Consensus         1 H~F~~~~~~~pt~C~~C~~~l~g~~~qg~~C~~   33 (50)
T 1ptq_A            1 HRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCED   33 (50)
T ss_dssp             CCEEEECCSSCCBCTTTCCBCCSSSSCEEEETT
T ss_pred             CCCEeecCCCCCCcCCCCceeeccCCccCEeCC
Confidence            8899999999999999987666 3345566654

>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A

Probab=95.25  E-value=0.0059  Score=41.07  Aligned_cols=30  Identities=10%  Similarity=-0.024  Sum_probs=25.5

Q ss_pred             ccccccCCccccccccccccccccCCcccccCC
Q psy1485         208 QNRWSKKGTKLHIFNDHTFIAKHLPGTLYTNSP  240 (252)
Q Consensus       208 PHrf~~~~y~sptFCdHCF~ak~L~g~~~~~~~  240 (252)
                      +|+|..++|..||||++|...++   .+|.+.+
T Consensus         3 ~H~F~~~~~~~pt~C~~C~~~l~---qG~~C~~   32 (52)
T 1faq_A            3 THNFARKTFLKLAFCDICQKFLL---NGFRCQT   32 (52)
T ss_dssp             CCCCEEECCSSCEECTTSSSEEC---SEEECTT
T ss_pred             CceeEeEeCCCCcCCCCcccccc---cCCEeCC
Confidence            79999999999999999987666   5667654

>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*

Probab=95.17  E-value=0.0075  Score=42.66  Aligned_cols=34  Identities=15%  Similarity=-0.026  Sum_probs=26.7

Q ss_pred             cccccccCCccccccccccccccc-cCCcccccCC
Q psy1485         207 QQNRWSKKGTKLHIFNDHTFIAKH-LPGTLYTNSP  240 (252)
Q Consensus       207 ~PHrf~~~~y~sptFCdHCF~ak~-L~g~~~~~~~  240 (252)
                      .+|+|.+++|..|+||+||...++ +...+|++++
T Consensus         8 ~~H~F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~   42 (65)
T 3uej_A            8 GSHRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCED   42 (65)
T ss_dssp             EECCEEEECCSSCCBCTTTCCBCCSSSSCEEEETT
T ss_pred             CCceEEeEeCCCCCcccccChhhhccCceeeECCC
Confidence            599999999999999999976665 3335666654

>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.15  E-value=0.0076  Score=44.77  Aligned_cols=39  Identities=10%  Similarity=-0.059  Sum_probs=30.1

Q ss_pred             hhccccccccccCCccccccccccccccc-cCCcccccCC
Q psy1485         202 RIELRQQNRWSKKGTKLHIFNDHTFIAKH-LPGTLYTNSP  240 (252)
Q Consensus       202 r~~ir~PHrf~~~~y~sptFCdHCF~ak~-L~g~~~~~~~  240 (252)
                      ......+|+|..++|..||||+||.-.+| +...+|++.+
T Consensus        11 k~~~~~~H~F~~~~~~~pt~C~~C~~~lwGl~kqg~~C~~   50 (83)
T 2yuu_A           11 KIHYIKNHEFIATFFGQPTFCSVCKDFVWGLNKQGYKCRQ   50 (83)
T ss_dssp             CEECGGGCCEEEECCSSCCCCSSSCCCCCSSSCCEEEETT
T ss_pred             hCcccCCCceEeEeCCCCcChhhcChhhccccccccccCC
Confidence            34445799999999999999999987666 3445677665

>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.70  E-value=0.0091  Score=43.53  Aligned_cols=39  Identities=8%  Similarity=-0.131  Sum_probs=29.0

Q ss_pred             hhccccccccccCCccccccccccccccc-cCCcccccCC
Q psy1485         202 RIELRQQNRWSKKGTKLHIFNDHTFIAKH-LPGTLYTNSP  240 (252)
Q Consensus       202 r~~ir~PHrf~~~~y~sptFCdHCF~ak~-L~g~~~~~~~  240 (252)
                      +.....+|+|..++|..||||+||...+| +...+|++.+
T Consensus        11 k~~~~~~H~F~~~~f~~pt~C~~C~~~lwGl~kqG~~C~~   50 (74)
T 2db6_A           11 KLVNDKPHKFKDHFFKKPKFCDVCARMIVLNNKFGLRCKN   50 (74)
T ss_dssp             CCSCSSBCCEEEEECSSCEECSSSCCEECHHHHEEEEESS
T ss_pred             ccccCCCCceEEeeCCCCcCchhcChhhccccCCccccCC
Confidence            34556899999999999999999976665 1224555544

>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A

Probab=94.66  E-value=0.012  Score=40.19  Aligned_cols=35  Identities=9%  Similarity=-0.122  Sum_probs=27.6

Q ss_pred             ccccccccCCccccccccccccccccCCcccccCCceee
Q psy1485         206 RQQNRWSKKGTKLHIFNDHTFIAKHLPGTLYTNSPFYFR  244 (252)
Q Consensus       206 r~PHrf~~~~y~sptFCdHCF~ak~L~g~~~~~~~~~~~  244 (252)
                      .+||+|..+++++ ++|++|.-.++  .| |++.+=-|+
T Consensus         2 ~i~HrF~~~t~~~-t~C~~C~k~i~--~G-~kC~~Ck~~   36 (49)
T 1kbe_A            2 SVTHRFSTKSWLS-QVCNVCQKSMI--FG-VKCKHCRLK   36 (49)
T ss_dssp             CCCCCEEEECCSS-CCCSSSCCSSC--CE-EEETTTTEE
T ss_pred             CCCcccCccCCCC-cCccccCceeE--Cc-CCCCCCCCc
Confidence            4799999999995 99999987776  44 788775443

>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}

Probab=94.51  E-value=0.013  Score=42.97  Aligned_cols=36  Identities=8%  Similarity=-0.098  Sum_probs=28.2

Q ss_pred             cccccccccCCccccccccccccccc-cCCcccccCC
Q psy1485         205 LRQQNRWSKKGTKLHIFNDHTFIAKH-LPGTLYTNSP  240 (252)
Q Consensus       205 ir~PHrf~~~~y~sptFCdHCF~ak~-L~g~~~~~~~  240 (252)
                      ...+|.|.+++|..||||+||...+| |...+|.+.+
T Consensus        20 ~~~~H~F~~~~f~~pt~C~~C~~~lwGl~kqG~~C~~   56 (77)
T 2enn_A           20 HVKCHEFTATFFPQPTFCSVCHEFVWGLNKQGYQCRQ   56 (77)
T ss_dssp             ESSSCEEEEECCSSCEECSSSCCEECCTTCCEEECSS
T ss_pred             cCCCCccEEEcCCCCcCccccChhhccccccccCcCC
Confidence            34699999999999999999987776 3345566654

>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}

Probab=93.91  E-value=0.019  Score=43.46  Aligned_cols=27  Identities=0%  Similarity=-0.148  Sum_probs=24.1

Q ss_pred             ccccccccccCCccccccccccccccc
Q psy1485         204 ELRQQNRWSKKGTKLHIFNDHTFIAKH  230 (252)
Q Consensus       204 ~ir~PHrf~~~~y~sptFCdHCF~ak~  230 (252)
                      -...+|+|.+.+|..||||+||.-.+|
T Consensus        20 ~~~~~H~F~~~~~~~PT~Cd~C~~~lW   46 (84)
T 2row_A           20 ICHKGHEFIPTLYHFPTNCEACMKPLW   46 (84)
T ss_dssp             EEETTEEEEEECCSSCEECSSSSSEEC
T ss_pred             EEcCCcceEeEcCCCCcchhhcCHhhh
Confidence            346899999999999999999987777

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=93.10  E-value=0.048  Score=51.80  Aligned_cols=39  Identities=3%  Similarity=-0.174  Sum_probs=27.9

Q ss_pred             hhccccccccccCCccccccccccccccc-cCCcccccCC
Q psy1485         202 RIELRQQNRWSKKGTKLHIFNDHTFIAKH-LPGTLYTNSP  240 (252)
Q Consensus       202 r~~ir~PHrf~~~~y~sptFCdHCF~ak~-L~g~~~~~~~  240 (252)
                      ..++..+|.|.++++..||||+||...++ +...+|+|++
T Consensus       203 H~niv~~h~f~~~~~~~pt~C~~C~~~l~g~~~qg~~C~~  242 (463)
T 3cxl_A          203 IPKYEKIHNFKVHTFRGPHWCEYCANFMWGLIAQGVKCAD  242 (463)
T ss_dssp             ----CBCCCEEEECCSSCCBCTTTCCBCCSSSCCEEEETT
T ss_pred             ccccCCCcceEEeecCCCCcchhhhhhhhhHHhcCeeccc
Confidence            44567899999999999999999976655 2235666664

>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}

Probab=91.40  E-value=0.058  Score=38.16  Aligned_cols=36  Identities=3%  Similarity=-0.287  Sum_probs=28.9

Q ss_pred             cccccccccCCccccccccccccccccCCcccccCC
Q psy1485         205 LRQQNRWSKKGTKLHIFNDHTFIAKHLPGTLYTNSP  240 (252)
Q Consensus       205 ir~PHrf~~~~y~sptFCdHCF~ak~L~g~~~~~~~  240 (252)
                      ...+|.|...+++.|++|++|.-.+++-..+|.+.|
T Consensus         5 ~~~~H~F~~kt~~~~~~C~~Cg~~i~~gkq~~kC~d   40 (61)
T 4b6d_A            5 SMRLHDFVSKTVIKPESCVPCGKRIKFGKLSLKCRD   40 (61)
T ss_dssp             CBCCCCEEEEECCSCEECTTTCCEECTTCEEEEESS
T ss_pred             cccceeEEeeeccCCcccccccCEEEEeeEeeECCC
Confidence            345999999999999999999877764446777765

>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3

Probab=90.60  E-value=0.18  Score=38.01  Aligned_cols=44  Identities=20%  Similarity=0.521  Sum_probs=32.0

Q ss_pred             CeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccc
Q psy1485         138 HTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTET  186 (252)
Q Consensus       138 H~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~  186 (252)
                      |.+..... .+..|+.|...+    ....|.|..|++..|..|+..-+.
T Consensus        38 H~L~L~~~-~~~~C~~C~~~~----~~~~Y~C~~C~f~lH~~Ca~~p~~   81 (89)
T 1v5n_A           38 HELELTRV-QVYTCDKCEEEG----TIWSYHCDECDFDLHAKCALNEDT   81 (89)
T ss_dssp             SCEEEECC-SSCCCTTTSCCC----CSCEEECTTTCCCCCHHHHHCSSC
T ss_pred             CccEEeeC-CCeEeCCCCCcC----CCcEEEcCCCCCeEcHHhcCCCCc
Confidence            55554432 256899999865    235699999999999999975443

>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1

Probab=88.47  E-value=0.39  Score=36.10  Aligned_cols=48  Identities=8%  Similarity=0.150  Sum_probs=34.1

Q ss_pred             ccCCCCccccc--ccchhhhccccccccccCCccccccccccccccccCCccc
Q psy1485         186 TTCPHSTIQHL--ELNKDRIELRQQNRWSKKGTKLHIFNDHTFIAKHLPGTLY  236 (252)
Q Consensus       186 ~~C~~~s~~~~--el~~~r~~ir~PHrf~~~~y~sptFCdHCF~ak~L~g~~~  236 (252)
                      ..|.+.+.+++  ++..+.....++|.|.+++.....+|+.|.   +..++.+
T Consensus         3 ~~~~w~~~~~~~~~~~~~~~~~~~~H~WveGNl~~~s~C~vC~---k~c~s~~   52 (84)
T 1r79_A            3 SGSSGTTLASIGKDIIEDADGIAMPHQWLEGNLPVSAKCTVCD---KTCGSVL   52 (84)
T ss_dssp             CCCCCCCCCCCCCCCCCCSSCCCBCCCEEESCCCTTCBCSSSC---CBCCCTT
T ss_pred             CCccceecccccccccccCCCccceeeEEccCCCCCCEeCCCC---CEeCCcc
Confidence            46777777665  344444456799999999999988999884   4344444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	252
d1r79a_	84	g.49.1.1 (A:) Diacylglycerol kinase delta {Human (	5e-12
d1ptqa_	50	g.49.1.1 (A:) Protein kinase C-delta (PKCdelta) {M	9e-10
d1xa6a3	62	g.49.1.1 (A:209-270) Beta-chimaerin, middle domain	1e-09
d1tbna_	66	g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus	4e-09
d1faqa_	52	g.49.1.1 (A:) RAF-1 {Human (Homo sapiens) [TaxId:	5e-09
d1kbea_	49	g.49.1.1 (A:) Kinase suppressor of Ras, Ksr {Mouse	3e-07

>d1r79a_ g.49.1.1 (A:) Diacylglycerol kinase delta {Human (Homo sapiens) [TaxId: 9606]} Length = 84

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Diacylglycerol kinase delta
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (140), Expect = 5e-12
 Identities = 14/52 (26%), Positives = 19/52 (36%)

Query: 138 HTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCP 189
           H ++  +LP    C +C K     L  Q + C  C    H  C     T C 
Sbjct: 28  HQWLEGNLPVSAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKESLLTKCS 79

>d1ptqa_ g.49.1.1 (A:) Protein kinase C-delta (PKCdelta) {Mouse (Mus musculus) [TaxId: 10090]} Length = 50

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase C-delta (PKCdelta)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.2 bits (122), Expect = 9e-10
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 138 HTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTC 188
           H F   +    T C  C   L   L KQG +C DC +  H +C  +    C
Sbjct: 1   HRFKVYNYMSPTFCDHCGSLL-WGLVKQGLKCEDCGMNVHHKCREKVANLC 50

>d1xa6a3 g.49.1.1 (A:209-270) Beta-chimaerin, middle domain {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Beta-chimaerin, middle domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.2 bits (122), Expect = 1e-09
 Identities = 16/52 (30%), Positives = 19/52 (36%), Gaps = 1/52 (1%)

Query: 138 HTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCP 189
           H F      G   C+ C   +   L  QG  C DC +  HKQC       C 
Sbjct: 5   HNFKVHTFRGPHWCEYCANFM-WGLIAQGVRCSDCGLNVHKQCSKHVPNDCQ 55

>d1tbna_ g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus rattus) [TaxId: 10117]} Length = 66

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase c-gamma
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 49.7 bits (118), Expect = 4e-09
 Identities = 15/54 (27%), Positives = 20/54 (37%), Gaps = 1/54 (1%)

Query: 136 NDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCP 189
           N H F        T C  C   L   L  QG +C  C +  H++C     + C 
Sbjct: 7   NKHKFRLHSYSSPTFCDHCGSLL-YGLVHQGMKCSCCEMNVHRRCVRSVPSLCG 59

>d1faqa_ g.49.1.1 (A:) RAF-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 52

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: RAF-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.8 bits (116), Expect = 5e-09
 Identities = 15/53 (28%), Positives = 20/53 (37%), Gaps = 5/53 (9%)

Query: 136 NDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTC 188
             H F  K       C +C K L       G+ C+ C  K H+ C  +  T C
Sbjct: 2   TTHNFARKTFLKLAFCDICQKFL-----LNGFRCQTCGYKFHEHCSTKVPTMC 49

>d1kbea_ g.49.1.1 (A:) Kinase suppressor of Ras, Ksr {Mouse (Mus musculus) [TaxId: 10090]} Length = 49

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Kinase suppressor of Ras, Ksr
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.0 bits (104), Expect = 3e-07
 Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 11/55 (20%)

Query: 129 GTKLHIFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVR 183
           G+  H F+  +++++       C +C K +       G +C+ C +KCH +C   
Sbjct: 1   GSVTHRFSTKSWLSQV------CNVCQKSM-----IFGVKCKHCRLKCHNKCTKE 44

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	252
d1xa6a3	62	Beta-chimaerin, middle domain {Human (Homo sapiens	99.57
d1tbna_	66	Protein kinase c-gamma {Rat (Rattus rattus) [TaxId	99.56
d1ptqa_	50	Protein kinase C-delta (PKCdelta) {Mouse (Mus musc	99.54
d1wmha_	83	Protein kinase C, iota type {Human (Homo sapiens)	99.42
d1faqa_	52	RAF-1 {Human (Homo sapiens) [TaxId: 9606]}	99.36
d1kbea_	49	Kinase suppressor of Ras, Ksr {Mouse (Mus musculus	99.24
d1r79a_	84	Diacylglycerol kinase delta {Human (Homo sapiens)	99.22
d1r79a_	84	Diacylglycerol kinase delta {Human (Homo sapiens)	95.65
d1tbna_	66	Protein kinase c-gamma {Rat (Rattus rattus) [TaxId	95.3
d1xa6a3	62	Beta-chimaerin, middle domain {Human (Homo sapiens	92.02
d1ptqa_	50	Protein kinase C-delta (PKCdelta) {Mouse (Mus musc	91.25
d1kbea_	49	Kinase suppressor of Ras, Ksr {Mouse (Mus musculus	89.83
d1v5na_	89	Pdi-like hypothetical protein At1g60420 {Thale cre	88.97
d1faqa_	52	RAF-1 {Human (Homo sapiens) [TaxId: 9606]}	88.05

>d1xa6a3 g.49.1.1 (A:209-270) Beta-chimaerin, middle domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Beta-chimaerin, middle domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=6.9e-16  Score=109.15  Aligned_cols=57  Identities=28%  Similarity=0.585  Sum_probs=53.7

Q ss_pred             cCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCCCc
Q psy1485         135 FNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHST  192 (252)
Q Consensus       135 ~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~s  192 (252)
                      ..+|.|...+|..|++|++|.++|| |+++|||+|++|++.+|++|...|+..|....
T Consensus         2 ~k~H~F~~~~~~~pt~C~~C~~~i~-g~~~~g~~C~~C~~~~H~~C~~~v~~~C~~~~   58 (62)
T d1xa6a3           2 EKTHNFKVHTFRGPHWCEYCANFMW-GLIAQGVRCSDCGLNVHKQCSKHVPNDCQPDL   58 (62)
T ss_dssp             CCCCCCCEECCSSCCBCTTTCCBCC-TTTTCEECCSSSCCCBCTGGGTTSCSCCCTTT
T ss_pred             CCCCEEEEeeCCCCCCCcccCcccc-ccccCeEEcCCCCchhhHHHHhhCCCcCCCCh
Confidence            4699999999999999999999997 99999999999999999999999999998643

>d1tbna_ g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus rattus) [TaxId: 10117]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase c-gamma
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.56  E-value=1.1e-15  Score=109.35  Aligned_cols=58  Identities=26%  Similarity=0.511  Sum_probs=54.0

Q ss_pred             ecCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCCCc
Q psy1485         134 IFNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPHST  192 (252)
Q Consensus       134 ~~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~s  192 (252)
                      ..++|.|..++|..|++|++|+++|| |+++|||+|.+|+++||++|...|+..|+...
T Consensus         5 p~~~H~F~~~~~~~~~~C~~C~~~i~-g~~~~g~~C~~C~~~~H~~C~~~v~~~C~~~~   62 (66)
T d1tbna_           5 PRNKHKFRLHSYSSPTFCDHCGSLLY-GLVHQGMKCSCCEMNVHRRCVRSVPSLCGVDH   62 (66)
T ss_dssp             CCCSCCEEECCSSSCCBCSSSCCBCC-TTSSSCEEETTTCCEECTTTTTTSCCCSSCCC
T ss_pred             CCCCCceEEEeCCCCcCCcCCCCccc-CcccCccccCcccCeEChHHhccccccCCCCc
Confidence            34689999999999999999999997 99999999999999999999999999997544

>d1ptqa_ g.49.1.1 (A:) Protein kinase C-delta (PKCdelta) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase C-delta (PKCdelta)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.54  E-value=1e-15  Score=103.99  Aligned_cols=50  Identities=32%  Similarity=0.679  Sum_probs=48.4

Q ss_pred             CeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccC
Q psy1485         138 HTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTC  188 (252)
Q Consensus       138 H~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C  188 (252)
                      |.|..++|.+|++|++|.++|| |+++|||+|++|++++|++|...|+.+|
T Consensus         1 H~F~~~~~~~~~~C~~C~~~i~-g~~~qg~~C~~C~~~~H~~C~~~v~~~C   50 (50)
T d1ptqa_           1 HRFKVYNYMSPTFCDHCGSLLW-GLVKQGLKCEDCGMNVHHKCREKVANLC   50 (50)
T ss_dssp             CCEEEECCSSCCBCTTTCCBCC-SSSSCEEEETTTCCEECHHHHTTSCSCC
T ss_pred             CceEEecCCCCcCCcccCCccc-CcccCcEECCCCCCeeChhHcccccCCC
Confidence            8999999999999999999997 9999999999999999999999999887

>d1wmha_ d.15.2.2 (A:) Protein kinase C, iota type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: CAD & PB1 domains
family: PB1 domain
domain: Protein kinase C, iota type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=4.5e-15  Score=110.57  Aligned_cols=50  Identities=26%  Similarity=0.480  Sum_probs=45.9

Q ss_pred             HHHHHHHh-----Hhhhhhhcc--CCCCCCCCCCCCCcccchhhhhccccCCccccccccccceeeeecc
Q psy1485          44 VDLIRSAC-----QVYLMVFVL--NDHCSSVGPLREGSARSSLSEASGVSGASTRTYFNEASTLVLETLE  106 (252)
Q Consensus        44 ~~~~~~~~-----~~~~~~~~~--~d~~~~~~~~~~~s~~~~Lseas~~s~~~~~~~~~~~s~L~le~~~  106 (252)
                      -+|||+||     |+|||||||  +|||       ++|+|+||+||+||++      ++++|+|+||.+|
T Consensus        27 ~~evr~~C~f~~~q~fT~KWiDeEGDPC-------TISSQmEL~EA~RLye------~n~dseL~iHVFP   83 (83)
T d1wmha_          27 CNEVRDMCSFDNEQLFTMKWIDEEGDPC-------TVSSQLELEEAFRLYE------LNKDSELLIHVFP   83 (83)
T ss_dssp             HHHHHHHTTCCTTCCCEEEEECTTSCEE-------ECCSHHHHHHHHHHHH------HTTCSCEEEEEEC
T ss_pred             HHHHHHHhCCCcCCcEEEEEEcCCCCce-------eeecHHHHHHHHHHHH------ccCCcceEEEecC
Confidence            47999999     899999999  5666       8999999999999999      9999999999875

>d1faqa_ g.49.1.1 (A:) RAF-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: RAF-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=1.4e-13  Score=94.14  Aligned_cols=51  Identities=29%  Similarity=0.717  Sum_probs=47.9

Q ss_pred             cCCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCCC
Q psy1485         135 FNDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCPH  190 (252)
Q Consensus       135 ~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~~  190 (252)
                      +++|.|..++|..|++|++|+++||     |||+|++|++++|++|..+|+..|..
T Consensus         1 ~~~H~F~~~~f~~~~~C~~C~~~i~-----~g~~C~~C~~~~H~~C~~~v~~~C~~   51 (52)
T d1faqa_           1 LTTHNFARKTFLKLAFCDICQKFLL-----NGFRCQTCGYKFHEHCSTKVPTMCVD   51 (52)
T ss_dssp             CCCCCCEEECCSSCEECTTSSSEEC-----SEEECTTTTCCBCSTTSSSSSSCCCC
T ss_pred             CCceEEEEeeCCCCcCCccCCCccc-----cCCCcCCCCChhhhhhhccccccccC
Confidence            3689999999999999999999997     78999999999999999999999974

>d1kbea_ g.49.1.1 (A:) Kinase suppressor of Ras, Ksr {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Kinase suppressor of Ras, Ksr
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.24  E-value=2.1e-12  Score=87.76  Aligned_cols=47  Identities=30%  Similarity=0.809  Sum_probs=42.6

Q ss_pred             CCCeEEEEecCCCCcCCCCCCcccccccccccccCCccccccccccccccccCC
Q psy1485         136 NDHTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVRTETTCP  189 (252)
Q Consensus       136 ~gH~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~V~~~C~  189 (252)
                      .+|.|..++|..++ |++|+++||     |||+|++|+++||++|..+|| +|.
T Consensus         3 i~H~F~~~~~~~~t-C~~C~~~l~-----qg~~C~~C~~~~Hk~C~~~~P-~C~   49 (49)
T d1kbea_           3 VTHRFSTKSWLSQV-CNVCQKSMI-----FGVKCKHCRLKCHNKCTKEAP-ACR   49 (49)
T ss_dssp             CCCCEEEECCSSCC-CSSSCCSSC-----CEEEETTTTEEESSSCTTTSC-CCC
T ss_pred             CccEEeecCcCCCC-chhhchhhh-----CcCCcCCCCChHhHhhcccCC-CCC
Confidence            48999999998777 999999997     899999999999999999988 673

>d1r79a_ g.49.1.1 (A:) Diacylglycerol kinase delta {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Diacylglycerol kinase delta
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=1.9e-12  Score=96.63  Aligned_cols=57  Identities=23%  Similarity=0.507  Sum_probs=52.0

Q ss_pred             cCCCeEEEEecCCCCcCCCCCCcccccc-cccccccCCccccccccccccccccCCCCc
Q psy1485         135 FNDHTFIAKHLPGGTVCQMCCKPLARRL-GKQGYECRDCHVKCHKQCHVRTETTCPHST  192 (252)
Q Consensus       135 ~~gH~F~a~~f~~pt~C~vC~~~Iw~Gl-~kQGyqC~~Ck~~cHKKC~~~V~~~C~~~s  192 (252)
                      ..+|.|+...|..+++|++|.+.|| |+ ++|||+|..|++.||++|..+++..|.+++
T Consensus        25 ~~~H~w~~~n~~~~~~C~~C~~~i~-~~~~~qg~~C~~C~~~~H~~C~~~v~~~C~~P~   82 (84)
T d1r79a_          25 AMPHQWLEGNLPVSAKCTVCDKTCG-SVLRLQDWRCLWCKAMVHTSCKESLLTKCSGPS   82 (84)
T ss_dssp             CBCCCEEESCCCTTCBCSSSCCBCC-CTTTCCCEEESSSCCEECHHHHHHCCSCBCCSC
T ss_pred             CCCceEEeCCCCCCCCCcccCcccC-CccccCcEecCcCCchhhhhhcCCCCCcCcCCC
Confidence            3579999999999999999999998 64 689999999999999999999999998654

>d1r79a_ g.49.1.1 (A:) Diacylglycerol kinase delta {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Diacylglycerol kinase delta
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.65  E-value=0.0025  Score=46.01  Aligned_cols=34  Identities=6%  Similarity=0.010  Sum_probs=28.3

Q ss_pred             ccchhhhccccccccccCCccccccccccccccc
Q psy1485         197 ELNKDRIELRQQNRWSKKGTKLHIFNDHTFIAKH  230 (252)
Q Consensus       197 el~~~r~~ir~PHrf~~~~y~sptFCdHCF~ak~  230 (252)
                      ++..+...+.+||.|..+++..+++|++|...++
T Consensus        16 d~~~~~~~~~~~H~w~~~n~~~~~~C~~C~~~i~   49 (84)
T d1r79a_          16 DIIEDADGIAMPHQWLEGNLPVSAKCTVCDKTCG   49 (84)
T ss_dssp             CCCCCSSCCCBCCCEEESCCCTTCBCSSSCCBCC
T ss_pred             ccccccCCCCCCceEEeCCCCCCCCCcccCcccC
Confidence            3455667888999999999999999999976554

>d1tbna_ g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus rattus) [TaxId: 10117]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase c-gamma
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=95.30  E-value=0.0038  Score=42.78  Aligned_cols=37  Identities=16%  Similarity=0.042  Sum_probs=29.0

Q ss_pred             ccccccccccCCccccccccccccccc-cCCcccccCC
Q psy1485         204 ELRQQNRWSKKGTKLHIFNDHTFIAKH-LPGTLYTNSP  240 (252)
Q Consensus       204 ~ir~PHrf~~~~y~sptFCdHCF~ak~-L~g~~~~~~~  240 (252)
                      .++.||.|...++..|++|++|...++ +...+|.+++
T Consensus         4 ~p~~~H~F~~~~~~~~~~C~~C~~~i~g~~~~g~~C~~   41 (66)
T d1tbna_           4 DPRNKHKFRLHSYSSPTFCDHCGSLLYGLVHQGMKCSC   41 (66)
T ss_dssp             CCCCSCCEEECCSSSCCBCSSSCCBCCTTSSSCEEETT
T ss_pred             CCCCCCceEEEeCCCCcCCcCCCCcccCcccCccccCc
Confidence            356799999999999999999987776 2334576654

>d1xa6a3 g.49.1.1 (A:209-270) Beta-chimaerin, middle domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Beta-chimaerin, middle domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.02  E-value=0.036  Score=37.17  Aligned_cols=35  Identities=6%  Similarity=-0.132  Sum_probs=27.1

Q ss_pred             ccccccccCCccccccccccccccc-cCCcccccCC
Q psy1485         206 RQQNRWSKKGTKLHIFNDHTFIAKH-LPGTLYTNSP  240 (252)
Q Consensus       206 r~PHrf~~~~y~sptFCdHCF~ak~-L~g~~~~~~~  240 (252)
                      ..||+|+..++..|++|++|...++ +...+|.+++
T Consensus         2 ~k~H~F~~~~~~~pt~C~~C~~~i~g~~~~g~~C~~   37 (62)
T d1xa6a3           2 EKTHNFKVHTFRGPHWCEYCANFMWGLIAQGVRCSD   37 (62)
T ss_dssp             CCCCCCCEECCSSCCBCTTTCCBCCTTTTCEECCSS
T ss_pred             CCCCEEEEeeCCCCCCCcccCccccccccCeEEcCC
Confidence            3599999999999999999977665 3334566654

>d1ptqa_ g.49.1.1 (A:) Protein kinase C-delta (PKCdelta) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase C-delta (PKCdelta)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.25  E-value=0.042  Score=35.26  Aligned_cols=32  Identities=13%  Similarity=-0.106  Sum_probs=24.7

Q ss_pred             cccccCCcccccccccccccccc-CCcccccCC
Q psy1485         209 NRWSKKGTKLHIFNDHTFIAKHL-PGTLYTNSP  240 (252)
Q Consensus       209 Hrf~~~~y~sptFCdHCF~ak~L-~g~~~~~~~  240 (252)
                      |+|..+++..|++|++|.-.++- ..++|++++
T Consensus         1 H~F~~~~~~~~~~C~~C~~~i~g~~~qg~~C~~   33 (50)
T d1ptqa_           1 HRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCED   33 (50)
T ss_dssp             CCEEEECCSSCCBCTTTCCBCCSSSSCEEEETT
T ss_pred             CceEEecCCCCcCCcccCCcccCcccCcEECCC
Confidence            89999999999999999866652 234666654

>d1kbea_ g.49.1.1 (A:) Kinase suppressor of Ras, Ksr {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Kinase suppressor of Ras, Ksr
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.83  E-value=0.055  Score=35.15  Aligned_cols=31  Identities=10%  Similarity=-0.098  Sum_probs=24.1

Q ss_pred             ccccccccCCccccccccccccccccCCcccccCC
Q psy1485         206 RQQNRWSKKGTKLHIFNDHTFIAKHLPGTLYTNSP  240 (252)
Q Consensus       206 r~PHrf~~~~y~sptFCdHCF~ak~L~g~~~~~~~  240 (252)
                      .++|+|..+++..+| |++|...++   .+|.+.+
T Consensus         2 ~i~H~F~~~~~~~~t-C~~C~~~l~---qg~~C~~   32 (49)
T d1kbea_           2 SVTHRFSTKSWLSQV-CNVCQKSMI---FGVKCKH   32 (49)
T ss_dssp             CCCCCEEEECCSSCC-CSSSCCSSC---CEEEETT
T ss_pred             CCccEEeecCcCCCC-chhhchhhh---CcCCcCC
Confidence            379999999999888 999986665   3465554

>d1v5na_ g.49.1.3 (A:) Pdi-like hypothetical protein At1g60420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: C1-like domain
domain: Pdi-like hypothetical protein At1g60420
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.97  E-value=0.12  Score=37.36  Aligned_cols=41  Identities=20%  Similarity=0.500  Sum_probs=31.1

Q ss_pred             CeEEEEecCCCCcCCCCCCcccccccccccccCCcccccccccccc
Q psy1485         138 HTFIAKHLPGGTVCQMCCKPLARRLGKQGYECRDCHVKCHKQCHVR  183 (252)
Q Consensus       138 H~F~a~~f~~pt~C~vC~~~Iw~Gl~kQGyqC~~Ck~~cHKKC~~~  183 (252)
                      |.+.... ..+..|+.|++.+. |   ..|.|..|+|..|..|+..
T Consensus        38 H~L~L~~-~~~~~C~~C~~~~~-g---~~Y~C~~C~f~LH~~CA~~   78 (89)
T d1v5na_          38 HELELTR-VQVYTCDKCEEEGT-I---WSYHCDECDFDLHAKCALN   78 (89)
T ss_dssp             SCEEEEC-CSSCCCTTTSCCCC-S---CEEECTTTCCCCCHHHHHC
T ss_pred             CCeEEec-CCCCEeCCCCCCcC-C---cEeEeccCCCEecHHHcCC
Confidence            5554432 34567999999774 4   4699999999999999964

>d1faqa_ g.49.1.1 (A:) RAF-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: RAF-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.05  E-value=0.084  Score=34.17  Aligned_cols=31  Identities=10%  Similarity=-0.023  Sum_probs=24.7

Q ss_pred             cccccccCCccccccccccccccccCCcccccCC
Q psy1485         207 QQNRWSKKGTKLHIFNDHTFIAKHLPGTLYTNSP  240 (252)
Q Consensus       207 ~PHrf~~~~y~sptFCdHCF~ak~L~g~~~~~~~  240 (252)
                      .+|+|...++..|++|++|.-.++   ++|++++
T Consensus         2 ~~H~F~~~~f~~~~~C~~C~~~i~---~g~~C~~   32 (52)
T d1faqa_           2 TTHNFARKTFLKLAFCDICQKFLL---NGFRCQT   32 (52)
T ss_dssp             CCCCCEEECCSSCEECTTSSSEEC---SEEECTT
T ss_pred             CceEEEEeeCCCCcCCccCCCccc---cCCCcCC
Confidence            379999999999999999986665   3466653