Psyllid ID: psy14863

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
Protein Sequence
MESREPLLWHFKQLDGAVGLSFKANFHFALVGHLMKGYRHPNSTTITRTTRLLTSILGYFYVSLLVPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTGATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVIRMHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVITPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVINIIHSLL
Secondary Structure (PSIPRED)
ccccccHHHHHHcHHcHHcccccccHHHHHHHHHHHccccccccEEEcccccccHHHHHHccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHEEEccccHHHHccccccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHccccccccccHHHHHHHHcccccccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHcHHHHHHHHHHHHHHHHHcccHHHHHHHcccEEcccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
mesrepllwhfkqldgavglsfkANFHFALVGHLmkgyrhpnsttitRTTRLLTSILGYFYVSLLVPELIDMVLDSFLQrslesgvnsTVVEILADTAVALASANVQLVAKKIIVRLCRVLektgatpmpsleqhtlWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNtgplnmrcsshglVIRMHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNtgplnmrcsshglvitpmpsleqhtlWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNtgplnmrcsshGLVINIIHSLL
Flexible Loop (DISEMBL)
MESREPLLWHFKQLDGAVGLSFKANFHFALVGHLMKGYRHPNSTTITRTTRLLTSILGYFYVSLLVPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEktgatpmpsleqhtLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVIRMHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVITPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVINIIHSLL
Low Complexity Region (SEG)
MESREPLLWHFKQLDGAVGLSFKANFHFALVGHLMKGYRHPNsttitrttrlltsiLGYFYVSLLVPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTGATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVIRMHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVITPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVINIIHSLL
Disordered region (IsUnstruct)
******LLWHFKQLDGAVGLSFKANFHFALVGHLMKGYRHPNSTTITRTTRLLTSILGYFYVSLLVPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTGATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVIRMHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVITPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVINIIH***
Disordered Region (DISOPRED)
****EPL*WHFKQLDGAVGLSFKANFHFALVGHLMKGYRHPNSTTITRTTRLLTSILGYFYVSLLVPELIDMVLDSFLQRSL********VEILADTAVALASANVQLVAKKIIVRLCRVLEK*GA******EQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVIRMHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVITPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVINIIHSLL
Disordered Region (DISEMBL)
MESREPLLWHFKQLDGAVGLSFKANFHFALVGHLMKGYRHPNSTTITRTTRLLTSILGYFYVSLLVPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTGATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVIRMHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVITPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVINIIHSLL
Disordered Region (DISPRO)
**SREPLLWHFKQLDGAVGLSFKANFHFALVGHLMKGYRHPNSTTITRTTRLLTSILGYFYVSLLVPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTGATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVIRMHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVITPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVINIIHSLL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MESREPLLWHFKQLDGAVGLSFKANFHFALVGHLMKGYRHPNSTTITRTTRLLTSILGYFYVSLLVPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTGATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVIRMHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVITPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVINIIHSLL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	319	2.2.26 [Sep-21-2011]
P21359	2839	Neurofibromin OS=Homo sap	yes	N/A	0.454	0.051	0.551	1e-40
P97526	2820	Neurofibromin OS=Rattus n	yes	N/A	0.454	0.051	0.551	1e-40
Q04690	2841	Neurofibromin OS=Mus musc	yes	N/A	0.454	0.051	0.544	3e-40
P19158	3079	Inhibitory regulator prot	yes	N/A	0.213	0.022	0.338	3e-05
P35608	270	Neurofibromin (Fragment)	no	N/A	0.100	0.118	0.656	8e-05

>sp|P21359|NF1_HUMAN Neurofibromin OS=Homo sapiens GN=NF1 PE=1 SV=2

 Score =  167 bits (422), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 81/147 (55%), Positives = 113/147 (76%), Gaps = 2/147 (1%)

Query: 51   RLLTSILGYFYVSL-LVPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLV 109
            ++  SI    + SL  + +L+D+VLDSF++ S   G+ S   E++ADTAVALAS NV+LV
Sbjct: 1987 QMYPSIQAKIWGSLGQITDLLDVVLDSFIKTSATGGLGSIKAEVMADTAVALASGNVKLV 2046

Query: 110  AKKIIVRLCRVLEKTGATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHI 169
            + K+I R+C++++KT  +P P+LEQH +W+DIAI+ARY+LMLSFNN LDV  HLPYL H+
Sbjct: 2047 SSKVIGRMCKIIDKTCLSPTPTLEQHLMWDDIAILARYMLMLSFNNSLDVAAHLPYLFHV 2106

Query: 170  VTMLVNTGPLNMRCSSHGLVIR-MHTL 195
            VT LV TGPL++R S+HGLVI  +H+L
Sbjct: 2107 VTFLVATGPLSLRASTHGLVINIIHSL 2133

Stimulates the GTPase activity of Ras. NF1 shows greater affinity for Ras GAP, but lower specific activity. May be a regulator of Ras activity.
Homo sapiens (taxid: 9606)

>sp|P97526|NF1_RAT Neurofibromin OS=Rattus norvegicus GN=Nf1 PE=1 SV=1

 Score =  167 bits (422), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 81/147 (55%), Positives = 113/147 (76%), Gaps = 2/147 (1%)

Query: 51   RLLTSILGYFYVSL-LVPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLV 109
            ++  SI    + SL  + +L+D+VLDSF++ S   G+ S   E++ADTAVALAS NV+LV
Sbjct: 1968 QMYPSIQAKIWGSLGQITDLLDVVLDSFIKTSATGGLGSIKAEVMADTAVALASGNVKLV 2027

Query: 110  AKKIIVRLCRVLEKTGATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHI 169
            + K+I R+C++++KT  +P P+LEQH +W+DIAI+ARY+LMLSFNN LDV  HLPYL H+
Sbjct: 2028 SSKVIGRMCKIIDKTCLSPTPTLEQHLMWDDIAILARYMLMLSFNNSLDVAAHLPYLFHV 2087

Query: 170  VTMLVNTGPLNMRCSSHGLVIR-MHTL 195
            VT LV TGPL++R S+HGLVI  +H+L
Sbjct: 2088 VTFLVATGPLSLRASTHGLVINIIHSL 2114

Stimulates the GTPase activity of Ras. NF1 shows greater affinity for Ras GAP, but lower specific activity. May be a regulator of Ras activity.

Rattus norvegicus (taxid: 10116)

>sp|Q04690|NF1_MOUSE Neurofibromin OS=Mus musculus GN=Nf1 PE=1 SV=1

 Score =  165 bits (418), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 80/147 (54%), Positives = 113/147 (76%), Gaps = 2/147 (1%)

Query: 51   RLLTSILGYFYVSL-LVPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLV 109
            ++  SI    + SL  + +L+D+VLDSF++ S   G+ S   E++ADTAVALAS NV+LV
Sbjct: 1989 QMYPSIQAKIWGSLGQITDLLDVVLDSFIKTSATGGLGSIKAEVMADTAVALASGNVKLV 2048

Query: 110  AKKIIVRLCRVLEKTGATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHI 169
            + K+I R+C++++KT  +P P+LEQH +W+DIAI+ARY+LMLSFNN LDV  HLPYL H+
Sbjct: 2049 SSKVIGRMCKIIDKTCLSPTPTLEQHLMWDDIAILARYMLMLSFNNSLDVAAHLPYLFHV 2108

Query: 170  VTMLVNTGPLNMRCSSHGLVIR-MHTL 195
            VT LV TGPL++R S+HGL+I  +H+L
Sbjct: 2109 VTFLVATGPLSLRASTHGLLINIIHSL 2135

Stimulates the GTPase activity of Ras. NF1 shows greater affinity for Ras GAP, but lower specific activity. May be a regulator of Ras activity.

Mus musculus (taxid: 10090)

>sp|P19158|IRA2_YEAST Inhibitory regulator protein IRA2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IRA2 PE=1 SV=2

 Score = 49.7 bits (117), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 3/71 (4%)

Query: 251  MPSLEQHTL---WNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSS 307
            +PSL+   +   W+++ I+ +  + + F   L V  +LP +L IV++L++ GP  +R S 
Sbjct: 2530 LPSLKLEAMTQSWSELTILVKISIHVFFETSLLVQMYLPEILFIVSLLIDVGPRELRSSL 2589

Query: 308  HGLVINIIHSL 318
            H L++N+ HSL
Sbjct: 2590 HQLLMNVCHSL 2600

Inhibitory regulator of the Ras-cyclic AMP pathway. Stimulates the GTPase activity of Ras proteins.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|P35608|NF1_CHICK Neurofibromin (Fragment) OS=Gallus gallus GN=NF1 PE=2 SV=1

 Score = 48.1 bits (113), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 25/32 (78%)

Query: 1   MESREPLLWHFKQLDGAVGLSFKANFHFALVG 32
           ME R PL WH KQ+D  VGL+F +NF+FALVG
Sbjct: 236 MEIRRPLEWHCKQMDHFVGLNFNSNFNFALVG 267

Stimulates the GTPase activity of Ras. NF1 shows greater affinity for Ras GAP, but lower specific activity. May be a regulator of Ras activity.

Gallus gallus (taxid: 9031)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	319
270014705	1759	hypothetical protein TcasGA2_TC004757 [T	0.407	0.073	0.717	4e-46
157986235	224	neurofibromin 1 [Onthophagus hecate]	0.391	0.558	0.728	3e-45
157986249	224	neurofibromin 1 [Onthophagus taurus]	0.391	0.558	0.728	4e-45
157986217	224	neurofibromin 1 [Onthophagus acuminatus]	0.407	0.580	0.709	4e-45
157986241	224	neurofibromin 1 [Onthophagus nuchicornis	0.407	0.580	0.709	4e-45
242014915	2686	Neurofibromin, putative [Pediculus human	0.407	0.048	0.702	7e-45
157986227	224	neurofibromin 1 [Onthophagus ferox] gi|1	0.407	0.580	0.702	8e-45
347969334	2790	AGAP003140-PA [Anopheles gambiae str. PE	0.407	0.046	0.702	8e-45
321463713	2635	hypothetical protein DAPPUDRAFT_307021 [	0.410	0.049	0.689	9e-45
157118704	2762	neurofibromin [Aedes aegypti] gi|1088756	0.407	0.047	0.702	9e-45

>gi|270014705|gb|EFA11153.1| hypothetical protein TcasGA2_TC004757 [Tribolium castaneum]

 Score =  191 bits (485), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 94/131 (71%), Positives = 112/131 (85%), Gaps = 1/131 (0%)

Query: 66   VPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTG 125
            VPELIDMVLD+F+ RS+ SG+ S +VEI+ADTAVALASANVQLVAKK+I RLCRV++KT 
Sbjct: 943  VPELIDMVLDNFIHRSVNSGLGSPMVEIMADTAVALASANVQLVAKKVIGRLCRVVDKTC 1002

Query: 126  ATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSS 185
             +P P LEQH +W+DIAI+ARYLLMLSFNNCLDV RHLPYL H VT LV +G L+MR S+
Sbjct: 1003 QSPTPLLEQHMMWDDIAILARYLLMLSFNNCLDVARHLPYLFHTVTFLVCSGSLSMRAST 1062

Query: 186  HGLVIR-MHTL 195
            HGLVI  +H+L
Sbjct: 1063 HGLVINIIHSL 1073

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157986235|gb|ABW07349.1| neurofibromin 1 [Onthophagus hecate]

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 91/125 (72%), Positives = 106/125 (84%)

Query: 66  VPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTG 125
           VPELIDMVLD F+ +S+ SG+ S +VEI+ADTAVALASANVQLVAKK+I RLCRV++KT 
Sbjct: 7   VPELIDMVLDGFIHKSVTSGLGSPMVEIMADTAVALASANVQLVAKKVIGRLCRVVDKTC 66

Query: 126 ATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSS 185
            TP   LEQH +W+DIAI+ARYLLMLSFNNCLDV RHLPYL H VT LV +G L+MR S+
Sbjct: 67  QTPTQFLEQHMMWHDIAILARYLLMLSFNNCLDVARHLPYLFHTVTFLVCSGSLSMRAST 126

Query: 186 HGLVI 190
           HGLVI
Sbjct: 127 HGLVI 131

Source: Onthophagus hecate

Species: Onthophagus hecate

Genus: Onthophagus

Family: Scarabaeidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157986249|gb|ABW07356.1| neurofibromin 1 [Onthophagus taurus]

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 91/125 (72%), Positives = 106/125 (84%)

Query: 66  VPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTG 125
           VPELIDMVLD F+ +S+ SG+ S +VEI+ADTAVALASANVQLVAKK+I RLCRV++KT 
Sbjct: 7   VPELIDMVLDGFIHKSVTSGLGSPMVEIMADTAVALASANVQLVAKKVIGRLCRVVDKTC 66

Query: 126 ATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSS 185
            TP   LEQH +W+DIAI+ARYLLMLSFNNCLDV RHLPYL H VT LV +G L+MR S+
Sbjct: 67  QTPTQFLEQHMMWHDIAILARYLLMLSFNNCLDVARHLPYLFHTVTFLVCSGSLSMRAST 126

Query: 186 HGLVI 190
           HGLVI
Sbjct: 127 HGLVI 131

Source: Onthophagus taurus

Species: Onthophagus taurus

Genus: Onthophagus

Family: Scarabaeidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157986217|gb|ABW07340.1| neurofibromin 1 [Onthophagus acuminatus] gi|157986221|gb|ABW07342.1| neurofibromin 1 [Onthophagus asperulus] gi|157986223|gb|ABW07343.1| neurofibromin 1 [Onthophagus coscineus] gi|157986225|gb|ABW07344.1| neurofibromin 1 [Onthophagus cribripennis] gi|157986229|gb|ABW07346.1| neurofibromin 1 [Digitonthophagus gazella] gi|157986243|gb|ABW07353.1| neurofibromin 1 [Onthophagus pennsylvanicus] gi|157986245|gb|ABW07354.1| neurofibromin 1 [Onthophagus sagittarius] gi|157986247|gb|ABW07355.1| neurofibromin 1 [Onthophagus sugillatus]

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 93/131 (70%), Positives = 110/131 (83%), Gaps = 1/131 (0%)

Query: 66  VPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTG 125
           VPELIDMVLD F+ +S+ SG+ S +VEI+ADTAVALASANVQLVAKK+I RLCRV++KT 
Sbjct: 7   VPELIDMVLDGFIHKSVTSGLGSPMVEIMADTAVALASANVQLVAKKVIGRLCRVVDKTC 66

Query: 126 ATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSS 185
            TP   LEQH +W+DIAI+ARYLLMLSFNNCLDV RHLPYL H VT LV +G L+MR S+
Sbjct: 67  QTPTQFLEQHMMWHDIAILARYLLMLSFNNCLDVARHLPYLFHTVTFLVCSGSLSMRAST 126

Query: 186 HGLVIR-MHTL 195
           HGLVI  +H+L
Sbjct: 127 HGLVINIIHSL 137

Source: Onthophagus acuminatus

Species: Onthophagus acuminatus

Genus: Onthophagus

Family: Scarabaeidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157986241|gb|ABW07352.1| neurofibromin 1 [Onthophagus nuchicornis]

 Score =  187 bits (476), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 93/131 (70%), Positives = 110/131 (83%), Gaps = 1/131 (0%)

Query: 66  VPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTG 125
           VPELIDMVLD F+ +S+ SG+ S +VEI+ADTAVALASANVQLVAKK+I RLCRV++KT 
Sbjct: 7   VPELIDMVLDGFIHKSVTSGLGSPMVEIMADTAVALASANVQLVAKKVIGRLCRVVDKTC 66

Query: 126 ATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSS 185
            TP   LEQH +W+DIAI+ARYLLMLSFNNCLDV RHLPYL H VT LV +G L+MR S+
Sbjct: 67  QTPTQFLEQHMMWHDIAILARYLLMLSFNNCLDVARHLPYLFHTVTFLVCSGSLSMRAST 126

Query: 186 HGLVIR-MHTL 195
           HGLVI  +H+L
Sbjct: 127 HGLVINIIHSL 137

Source: Onthophagus nuchicornis

Species: Onthophagus nuchicornis

Genus: Onthophagus

Family: Scarabaeidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242014915|ref|XP_002428128.1| Neurofibromin, putative [Pediculus humanus corporis] gi|212512659|gb|EEB15390.1| Neurofibromin, putative [Pediculus humanus corporis]

 Score =  187 bits (474), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 92/131 (70%), Positives = 111/131 (84%), Gaps = 1/131 (0%)

Query: 66   VPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTG 125
            VP+LIDMVLDSF+ RS+ SG+ S +VEI+ADTAVALASANVQLVAKK+I RLCRV E+T 
Sbjct: 1945 VPDLIDMVLDSFIHRSVSSGLGSPMVEIMADTAVALASANVQLVAKKVIGRLCRVFERTC 2004

Query: 126  ATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSS 185
             +P P +E H LW+DIAI+ARYLLMLSFNNCLDVV+HLP+L H VT LV +G L+MR S+
Sbjct: 2005 KSPTPLVENHMLWDDIAILARYLLMLSFNNCLDVVKHLPFLFHSVTFLVCSGSLSMRAST 2064

Query: 186  HGLVIR-MHTL 195
            HGLVI  +H+L
Sbjct: 2065 HGLVINIIHSL 2075

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157986227|gb|ABW07345.1| neurofibromin 1 [Onthophagus ferox] gi|157986231|gb|ABW07347.1| neurofibromin 1 [Onthophagus granulatus] gi|157986233|gb|ABW07348.1| neurofibromin 1 [Onthophagus haagi] gi|157986239|gb|ABW07351.1| neurofibromin 1 [Onthophagus mjobergi] gi|157986251|gb|ABW07357.1| neurofibromin 1 [Onthophagus vermiculatus]

 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 92/131 (70%), Positives = 110/131 (83%), Gaps = 1/131 (0%)

Query: 66  VPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTG 125
           VPELIDMVLD F+ +S+ SG+ S +VEI+ADTAVALASANVQLVAKK+I RLCRV++KT 
Sbjct: 7   VPELIDMVLDGFIHKSVTSGLGSPMVEIMADTAVALASANVQLVAKKVIGRLCRVVDKTC 66

Query: 126 ATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSS 185
            TP   LEQH +W+DIAI+ARYLLMLSFNNCLDV +HLPYL H VT LV +G L+MR S+
Sbjct: 67  QTPTQFLEQHMMWHDIAILARYLLMLSFNNCLDVAKHLPYLFHTVTFLVCSGSLSMRAST 126

Query: 186 HGLVIR-MHTL 195
           HGLVI  +H+L
Sbjct: 127 HGLVINIIHSL 137

Source: Onthophagus ferox

Species: Onthophagus ferox

Genus: Onthophagus

Family: Scarabaeidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347969334|ref|XP_312829.4| AGAP003140-PA [Anopheles gambiae str. PEST] gi|333468475|gb|EAA08440.4| AGAP003140-PA [Anopheles gambiae str. PEST]

 Score =  186 bits (473), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 92/131 (70%), Positives = 110/131 (83%), Gaps = 1/131 (0%)

Query: 66   VPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTG 125
            +PELIDMVLD+F+ +S+ SG+ S  VEI+ADTAVALASANVQLVAKK+I RLCRV++KT 
Sbjct: 1996 IPELIDMVLDNFIHKSVSSGLGSPQVEIMADTAVALASANVQLVAKKVIGRLCRVMDKTC 2055

Query: 126  ATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSS 185
             +P   LEQH +W+DIAI+ARYLLMLSFNNCLDV RHLPYL H VT LV TG L+MR S+
Sbjct: 2056 HSPTQYLEQHMMWDDIAILARYLLMLSFNNCLDVARHLPYLFHTVTFLVCTGSLSMRAST 2115

Query: 186  HGLVIR-MHTL 195
            HGLVI  +H+L
Sbjct: 2116 HGLVINIIHSL 2126

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321463713|gb|EFX74727.1| hypothetical protein DAPPUDRAFT_307021 [Daphnia pulex]

 Score =  186 bits (473), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 91/132 (68%), Positives = 111/132 (84%), Gaps = 1/132 (0%)

Query: 65   LVPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKT 124
            +V ELIDM+LDSF++RS+  G+ S   EI+ADTAVALASANVQLVA+K+I RLCRVLEKT
Sbjct: 1951 IVSELIDMILDSFIKRSVTGGLGSAQAEIMADTAVALASANVQLVARKVIGRLCRVLEKT 2010

Query: 125  GATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCS 184
              +P  +LEQH +W+DIAI+ARYLLMLSFNNCLDV RHLPYL H +T+LV TGPL++R S
Sbjct: 2011 CTSPTANLEQHLMWDDIAILARYLLMLSFNNCLDVARHLPYLFHSITLLVCTGPLSLRAS 2070

Query: 185  SHGLVIR-MHTL 195
             HGLVI  +H+L
Sbjct: 2071 LHGLVINIIHSL 2082

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157118704|ref|XP_001653220.1| neurofibromin [Aedes aegypti] gi|108875642|gb|EAT39867.1| AAEL008371-PA [Aedes aegypti]

 Score =  186 bits (473), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 92/131 (70%), Positives = 110/131 (83%), Gaps = 1/131 (0%)

Query: 66   VPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTG 125
            +PELIDMVLD+F+ +S+ SG+ S  VEI+ADTAVALASANVQLVAKK+I RLCRV++KT 
Sbjct: 1992 IPELIDMVLDNFIHKSVSSGLGSPQVEIMADTAVALASANVQLVAKKVIGRLCRVMDKTC 2051

Query: 126  ATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSS 185
             +P   LEQH +W+DIAI+ARYLLMLSFNNCLDV RHLPYL H VT LV TG L+MR S+
Sbjct: 2052 HSPTQYLEQHMMWDDIAILARYLLMLSFNNCLDVARHLPYLFHTVTFLVCTGSLSMRAST 2111

Query: 186  HGLVIR-MHTL 195
            HGLVI  +H+L
Sbjct: 2112 HGLVINIIHSL 2122

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	319
FB|FBgn0015269	2802	Nf1 "Neurofibromin 1" [Drosoph	0.407	0.046	0.633	1.7e-38
ZFIN|ZDB-GENE-091111-4	2759	nf1b "neurofibromin 1b" [Danio	0.407	0.047	0.587	2.7e-38
UNIPROTKB|Q9YGV2	2763	NF1 "Neurofibromatosis type 1"	0.407	0.047	0.587	1.2e-37
UNIPROTKB|E1BTI4	2814	NF1 "Neurofibromin" [Gallus ga	0.407	0.046	0.587	1.2e-37
UNIPROTKB|E1C9F6	2835	NF1 "Neurofibromin" [Gallus ga	0.407	0.045	0.587	1.2e-37
UNIPROTKB|H0Y465	2502	NF1 "Neurofibromin truncated"	0.407	0.051	0.587	1.7e-37
UNIPROTKB|J9JHM1	2774	NF1 "Uncharacterized protein"	0.407	0.046	0.587	1.9e-37
UNIPROTKB|I3LV00	2795	NF1 "Uncharacterized protein"	0.407	0.046	0.587	2e-37
UNIPROTKB|F1PIZ0	2800	NF1 "Uncharacterized protein"	0.407	0.046	0.587	2e-37
UNIPROTKB|F1LM28	2801	Nf1 "Neurofibromin" [Rattus no	0.407	0.046	0.587	2e-37

FB|FBgn0015269 Nf1 "Neurofibromin 1" [Drosophila melanogaster (taxid:7227)]

 Score = 429 (156.1 bits), Expect = 1.7e-38, P = 1.7e-38
 Identities = 83/131 (63%), Positives = 105/131 (80%)

Query:    66 VPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTG 125
             +PELIDMVLD+FL +S+  G+ S  VEI+ADTAVALASANVQLV+KK+I R+CRV++K+ 
Sbjct:  2034 IPELIDMVLDNFLHKSITYGLGSPQVEIMADTAVALASANVQLVSKKVITRICRVMDKSC 2093

Query:   126 ATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSS 185
               P   LEQH +W+DIAI+ RYLLMLSFNNCLDV   +PYL H +T LV +G L+MR S+
Sbjct:  2094 TNPTQYLEQHMMWDDIAILGRYLLMLSFNNCLDVATSVPYLFHTITFLVCSGSLSMRAST 2153

Query:   186 HGLVIRM-HTL 195
             HGLVI + H+L
Sbjct:  2154 HGLVINIIHSL 2164

GO:0045762 "positive regulation of adenylate cyclase activity" evidence=IMP

GO:0005099 "Ras GTPase activator activity" evidence=ISS;IDA

GO:0040014 "regulation of multicellular organism growth" evidence=IMP

GO:0019933 "cAMP-mediated signaling" evidence=IMP

GO:0008355 "olfactory learning" evidence=IMP

GO:0007614 "short-term memory" evidence=IMP

GO:0042066 "perineurial glial growth" evidence=IGI

GO:0007265 "Ras protein signal transduction" evidence=IGI

GO:0045475 "locomotor rhythm" evidence=IMP

GO:0040018 "positive regulation of multicellular organism growth" evidence=IMP

GO:0046578 "regulation of Ras protein signal transduction" evidence=IMP

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0009408 "response to heat" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0007616 "long-term memory" evidence=IMP

GO:0005737 "cytoplasm" evidence=IBA

GO:0032320 "positive regulation of Ras GTPase activity" evidence=IBA

GO:0031235 "intrinsic to internal side of plasma membrane" evidence=IBA

GO:0046580 "negative regulation of Ras protein signal transduction" evidence=IBA

ZFIN|ZDB-GENE-091111-4 nf1b "neurofibromin 1b" [Danio rerio (taxid:7955)]

 Score = 427 (155.4 bits), Expect = 2.7e-38, P = 2.7e-38
 Identities = 77/131 (58%), Positives = 108/131 (82%)

Query:    66 VPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTG 125
             + +L+D+VLDSF++ S   G+ S   E++ADTAVALAS NV+LV+ K+I+R+C++++KT 
Sbjct:  1918 ITDLLDVVLDSFIKTSATGGLGSIKAEVMADTAVALASGNVKLVSSKVIIRMCKIIDKTC 1977

Query:   126 ATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSS 185
              +P P+LEQH +W+DIAI+ARY+LMLSFNN LDV  HLPYL H+VT+LV TGPL++R S+
Sbjct:  1978 LSPTPTLEQHLMWDDIAILARYMLMLSFNNSLDVAAHLPYLFHVVTLLVATGPLSLRAST 2037

Query:   186 HGLVIRM-HTL 195
             HGLVI + H+L
Sbjct:  2038 HGLVINIIHSL 2048

GO:0005622 "intracellular" evidence=IEA

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0070444 "oligodendrocyte progenitor proliferation" evidence=IMP

GO:0001568 "blood vessel development" evidence=IGI;IMP

GO:0007507 "heart development" evidence=IMP

UNIPROTKB|Q9YGV2 NF1 "Neurofibromatosis type 1" [Takifugu rubripes (taxid:31033)]

 Score = 421 (153.3 bits), Expect = 1.2e-37, P = 1.2e-37
 Identities = 77/131 (58%), Positives = 107/131 (81%)

Query:    66 VPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTG 125
             + +L+D+VLDSF++ S   G+ S   E++ADTAVALAS NV+LV+ K+I R+C++++KT 
Sbjct:  1932 ITDLLDVVLDSFIKTSATGGLGSIKAEVMADTAVALASGNVKLVSSKVIGRMCKIIDKTC 1991

Query:   126 ATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSS 185
              +P P+LEQH +W+DIAI+ARY+LMLSFNN LDV  HLPYL H+VT+LV TGPL++R S+
Sbjct:  1992 LSPTPTLEQHLMWDDIAILARYMLMLSFNNSLDVAAHLPYLFHVVTLLVATGPLSLRAST 2051

Query:   186 HGLVIRM-HTL 195
             HGLVI + H+L
Sbjct:  2052 HGLVINIIHSL 2062

GO:0005099 "Ras GTPase activator activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0031235 "intrinsic to internal side of plasma membrane" evidence=ISS

GO:0032320 "positive regulation of Ras GTPase activity" evidence=ISS

GO:0046580 "negative regulation of Ras protein signal transduction" evidence=ISS

UNIPROTKB|E1BTI4 NF1 "Neurofibromin" [Gallus gallus (taxid:9031)]

 Score = 421 (153.3 bits), Expect = 1.2e-37, P = 1.2e-37
 Identities = 77/131 (58%), Positives = 107/131 (81%)

Query:    66 VPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTG 125
             + +L+D+VLDSF++ S   G+ S   E++ADTAVALAS NV+LV+ K+I R+C++++KT 
Sbjct:  1977 ITDLLDVVLDSFIKTSATGGLGSIKAEVMADTAVALASGNVKLVSSKVIGRMCKIIDKTC 2036

Query:   126 ATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSS 185
              +P P+LEQH +W+DIAI+ARY+LMLSFNN LDV  HLPYL H+VT+LV TGPL++R S+
Sbjct:  2037 LSPTPTLEQHLMWDDIAILARYMLMLSFNNSLDVAAHLPYLFHVVTLLVATGPLSLRAST 2096

Query:   186 HGLVIRM-HTL 195
             HGLVI + H+L
Sbjct:  2097 HGLVINIIHSL 2107

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

UNIPROTKB|E1C9F6 NF1 "Neurofibromin" [Gallus gallus (taxid:9031)]

 Score = 421 (153.3 bits), Expect = 1.2e-37, P = 1.2e-37
 Identities = 77/131 (58%), Positives = 107/131 (81%)

Query:    66 VPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTG 125
             + +L+D+VLDSF++ S   G+ S   E++ADTAVALAS NV+LV+ K+I R+C++++KT 
Sbjct:  1998 ITDLLDVVLDSFIKTSATGGLGSIKAEVMADTAVALASGNVKLVSSKVIGRMCKIIDKTC 2057

Query:   126 ATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSS 185
              +P P+LEQH +W+DIAI+ARY+LMLSFNN LDV  HLPYL H+VT+LV TGPL++R S+
Sbjct:  2058 LSPTPTLEQHLMWDDIAILARYMLMLSFNNSLDVAAHLPYLFHVVTLLVATGPLSLRAST 2117

Query:   186 HGLVIRM-HTL 195
             HGLVI + H+L
Sbjct:  2118 HGLVINIIHSL 2128

GO:0000165 "MAPK cascade" evidence=IEA

GO:0001649 "osteoblast differentiation" evidence=IEA

GO:0001656 "metanephros development" evidence=IEA

GO:0001666 "response to hypoxia" evidence=IEA

GO:0001889 "liver development" evidence=IEA

GO:0001937 "negative regulation of endothelial cell proliferation" evidence=IEA

GO:0001938 "positive regulation of endothelial cell proliferation" evidence=IEA

GO:0001953 "negative regulation of cell-matrix adhesion" evidence=IEA

GO:0005099 "Ras GTPase activator activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007265 "Ras protein signal transduction" evidence=IEA

GO:0007406 "negative regulation of neuroblast proliferation" evidence=IEA

GO:0007507 "heart development" evidence=IEA

GO:0007519 "skeletal muscle tissue development" evidence=IEA

GO:0008542 "visual learning" evidence=IEA

GO:0014065 "phosphatidylinositol 3-kinase cascade" evidence=IEA

GO:0016525 "negative regulation of angiogenesis" evidence=IEA

GO:0021510 "spinal cord development" evidence=IEA

GO:0021897 "forebrain astrocyte development" evidence=IEA

GO:0021915 "neural tube development" evidence=IEA

GO:0021987 "cerebral cortex development" evidence=IEA

GO:0022011 "myelination in peripheral nervous system" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0030199 "collagen fibril organization" evidence=IEA

GO:0030325 "adrenal gland development" evidence=IEA

GO:0030336 "negative regulation of cell migration" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0030425 "dendrite" evidence=IEA

GO:0032228 "regulation of synaptic transmission, GABAergic" evidence=IEA

GO:0035021 "negative regulation of Rac protein signal transduction" evidence=IEA

GO:0042060 "wound healing" evidence=IEA

GO:0042992 "negative regulation of transcription factor import into nucleus" evidence=IEA

GO:0043407 "negative regulation of MAP kinase activity" evidence=IEA

GO:0043473 "pigmentation" evidence=IEA

GO:0043525 "positive regulation of neuron apoptotic process" evidence=IEA

GO:0043535 "regulation of blood vessel endothelial cell migration" evidence=IEA

GO:0045124 "regulation of bone resorption" evidence=IEA

GO:0045671 "negative regulation of osteoclast differentiation" evidence=IEA

GO:0045762 "positive regulation of adenylate cyclase activity" evidence=IEA

GO:0046929 "negative regulation of neurotransmitter secretion" evidence=IEA

GO:0048147 "negative regulation of fibroblast proliferation" evidence=IEA

GO:0048169 "regulation of long-term neuronal synaptic plasticity" evidence=IEA

GO:0048485 "sympathetic nervous system development" evidence=IEA

GO:0048593 "camera-type eye morphogenesis" evidence=IEA

GO:0048712 "negative regulation of astrocyte differentiation" evidence=IEA

GO:0048715 "negative regulation of oligodendrocyte differentiation" evidence=IEA

GO:0048745 "smooth muscle tissue development" evidence=IEA

GO:0048844 "artery morphogenesis" evidence=IEA

GO:0048853 "forebrain morphogenesis" evidence=IEA

UNIPROTKB|H0Y465 NF1 "Neurofibromin truncated" [Homo sapiens (taxid:9606)]

 Score = 419 (152.6 bits), Expect = 1.7e-37, P = 1.7e-37
 Identities = 77/131 (58%), Positives = 106/131 (80%)

Query:    66 VPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTG 125
             + +L+D+VLDSF++ S   G+ S   E++ADTAVALAS NV+LV+ K+I R+C++++KT 
Sbjct:  1648 ITDLLDVVLDSFIKTSATGGLGSIKAEVMADTAVALASGNVKLVSSKVIGRMCKIIDKTC 1707

Query:   126 ATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSS 185
              +P P+LEQH +W+DIAI+ARY+LMLSFNN LDV  HLPYL H+VT LV TGPL++R S+
Sbjct:  1708 LSPTPTLEQHLMWDDIAILARYMLMLSFNNSLDVAAHLPYLFHVVTFLVATGPLSLRAST 1767

Query:   186 HGLVIRM-HTL 195
             HGLVI + H+L
Sbjct:  1768 HGLVINIIHSL 1778

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

UNIPROTKB|J9JHM1 NF1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 419 (152.6 bits), Expect = 1.9e-37, P = 1.9e-37
 Identities = 77/131 (58%), Positives = 106/131 (80%)

Query:    66 VPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTG 125
             + +L+D+VLDSF++ S   G+ S   E++ADTAVALAS NV+LV+ K+I R+C++++KT 
Sbjct:  1938 ITDLLDVVLDSFIKTSATGGLGSIKAEVMADTAVALASGNVKLVSSKVIGRMCKIIDKTC 1997

Query:   126 ATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSS 185
              +P P+LEQH +W+DIAI+ARY+LMLSFNN LDV  HLPYL H+VT LV TGPL++R S+
Sbjct:  1998 LSPTPTLEQHLMWDDIAILARYMLMLSFNNSLDVAAHLPYLFHVVTFLVATGPLSLRAST 2057

Query:   186 HGLVIRM-HTL 195
             HGLVI + H+L
Sbjct:  2058 HGLVINIIHSL 2068

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IEA

UNIPROTKB|I3LV00 NF1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 419 (152.6 bits), Expect = 2.0e-37, P = 2.0e-37
 Identities = 77/131 (58%), Positives = 106/131 (80%)

Query:    66 VPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTG 125
             + +L+D+VLDSF++ S   G+ S   E++ADTAVALAS NV+LV+ K+I R+C++++KT 
Sbjct:  1959 ITDLLDVVLDSFIKTSATGGLGSIKAEVMADTAVALASGNVKLVSSKVIGRMCKIIDKTC 2018

Query:   126 ATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSS 185
              +P P+LEQH +W+DIAI+ARY+LMLSFNN LDV  HLPYL H+VT LV TGPL++R S+
Sbjct:  2019 LSPTPTLEQHLMWDDIAILARYMLMLSFNNSLDVAAHLPYLFHVVTFLVATGPLSLRAST 2078

Query:   186 HGLVIRM-HTL 195
             HGLVI + H+L
Sbjct:  2079 HGLVINIIHSL 2089

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IEA

UNIPROTKB|F1PIZ0 NF1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 419 (152.6 bits), Expect = 2.0e-37, P = 2.0e-37
 Identities = 77/131 (58%), Positives = 106/131 (80%)

Query:    66 VPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTG 125
             + +L+D+VLDSF++ S   G+ S   E++ADTAVALAS NV+LV+ K+I R+C++++KT 
Sbjct:  1964 ITDLLDVVLDSFIKTSATGGLGSIKAEVMADTAVALASGNVKLVSSKVIGRMCKIIDKTC 2023

Query:   126 ATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSS 185
              +P P+LEQH +W+DIAI+ARY+LMLSFNN LDV  HLPYL H+VT LV TGPL++R S+
Sbjct:  2024 LSPTPTLEQHLMWDDIAILARYMLMLSFNNSLDVAAHLPYLFHVVTFLVATGPLSLRAST 2083

Query:   186 HGLVIRM-HTL 195
             HGLVI + H+L
Sbjct:  2084 HGLVINIIHSL 2094

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IEA

UNIPROTKB|F1LM28 Nf1 "Neurofibromin" [Rattus norvegicus (taxid:10116)]

 Score = 419 (152.6 bits), Expect = 2.0e-37, P = 2.0e-37
 Identities = 77/131 (58%), Positives = 106/131 (80%)

Query:    66 VPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTG 125
             + +L+D+VLDSF++ S   G+ S   E++ADTAVALAS NV+LV+ K+I R+C++++KT 
Sbjct:  1964 ITDLLDVVLDSFIKTSATGGLGSIKAEVMADTAVALASGNVKLVSSKVIGRMCKIIDKTC 2023

Query:   126 ATPMPSLEQHTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSS 185
              +P P+LEQH +W+DIAI+ARY+LMLSFNN LDV  HLPYL H+VT LV TGPL++R S+
Sbjct:  2024 LSPTPTLEQHLMWDDIAILARYMLMLSFNNSLDVAAHLPYLFHVVTFLVATGPLSLRAST 2083

Query:   186 HGLVIRM-HTL 195
             HGLVI + H+L
Sbjct:  2084 HGLVINIIHSL 2094

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q04690	NF1_MOUSE	No assigned EC number	0.5442	0.4545	0.0510	yes	N/A
P21359	NF1_HUMAN	No assigned EC number	0.5510	0.4545	0.0510	yes	N/A
P97526	NF1_RAT	No assigned EC number	0.5510	0.4545	0.0514	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	319
KOG1826|consensus	2724		100.0
KOG1826|consensus	2724		99.84
PF03378	435	CAS_CSE1: CAS/CSE protein, C-terminus; InterPro: I	85.48

>KOG1826|consensus

Probab=100.00  E-value=5e-39  Score=348.76  Aligned_cols=247  Identities=30%  Similarity=0.429  Sum_probs=235.3

Q ss_pred             hhHHHHHHHHHHHhhhcCCCCcchHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhhhcCCCCCCccccCChHHHHHHHHH
Q psy14863         68 ELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQLVAKKIIVRLCRVLEKTGATPMPSLEQHTLWNDIAIMARY  147 (319)
Q Consensus        68 ~Li~ivldE~I~~Ald~g~gs~~~Eiia~i~vsLsS~~v~lV~gkIIsRLrk~i~~Ts~~Ps~~L~~h~~W~EI~IL~R~  147 (319)
                      ++.+.++|.+++...++|.|+.+.|+||++.++++|.||++|+.++|.|.|+++++++.+|++++|+|..|+.+++|.|+
T Consensus      1971 ~~~~~vlnnf~~~s~~~glgs~~lelva~t~l~l~s~nvk~vS~nlI~~~c~~~d~~~t~p~~s~Eq~v~wD~~t~L~r~ 2050 (2724)
T KOG1826|consen 1971 STSSPVLNNFVKQSKERGLGSCHLELVALTGLFLESKNVKNVSYNLIAATCASFDLNFTHPHRSPEQYVPWDTTTFLGRI 2050 (2724)
T ss_pred             chhhHHHHHHHHhhhhccccchhhHHHHHHHHhhcccchhhhHHHHHHHHHHHhccccCCCCCCHhHhCCcccHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhccchhhHhhhhhHHHHHHHHhhccCCchhHHhHhHhHHHH-hhhcccccHH----HHHHHHHHhhhhhhhccccc
Q psy14863        148 LLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVIRM-HTLWNDIAIM----ARYLLMLSFNNCLDVVRHLP  222 (319)
Q Consensus       148 ~l~LsF~n~l~aq~yLPEifhIVTLLi~~Gp~~vR~svhgLliNt-hSL~t~~~L~----~~~~l~~~~~~~~d~~~~~~  222 (319)
                      ..||||+|++++.-.+|++||.+|.+|.+||..+|.++|||++|+ ||+|++.+..    .++++++++++|     ++|
T Consensus      2051 ~~mlS~sn~~~~a~~~pYl~h~ltfli~tg~~sl~~~t~~L~i~v~~al~~~~~~~~Se~~~~liRLSv~Ef-----s~p 2125 (2724)
T KOG1826|consen 2051 GKMLSESNPELTAYMFPYLLHALTFLIPTGICSLSYWTPNLYIHVYLALDEEGPENISEIFRILIRLSVREF-----SFP 2125 (2724)
T ss_pred             HHHHcccChhhHHHHHHHHHhheeeeecccceeeeeccCcceeeeeecccccCchhHHHHHHHHHhhccccc-----cch
Confidence            999999999999999999999999999999999999999999999 9999999887    899999999999     999


Q ss_pred             --chhheeeeeecccchhhhhhccCCCCC---------------------------------------CCCccccc-CCc
Q psy14863        223 --YLLHIVTMLVNTGPLNMRCSSHGLVIT---------------------------------------PMPSLEQH-TLW  260 (319)
Q Consensus       223 --~~l~~~~~~~~~~lsrlRkai~~ts~~---------------------------------------p~~~L~~h-~~W  260 (319)
                        ||+||.+..+++|....|.+.+-.+..                                       |.-.++.. ++|
T Consensus      2126 kfYL~fg~s~lks~~~ltfr~~~~~~s~a~~~~s~~~~~l~al~tv~pt~ev~~~ai~kii~~~k~~lp~~el~~~~~s~ 2205 (2724)
T KOG1826|consen 2126 KFYLQFGWSLLKSDGRLTFRIVDEVISHALERDSENRDWLKALLTVLPTTEVANNAIQKIIAKIKSFLPSLELEAMTQSW 2205 (2724)
T ss_pred             HHHHHHHHHHHHhcceeeeeeehhcccccccccchhhhhHHHHHhhcchHHHHHHHHHHHHHHHHhhCchhHHHHHHHHh
Confidence              999999999999999999888744433                                       34344444 899


Q ss_pred             hHHHHHHHHHHHHhcccchhhhhhhhHHHHHHHHHhccCchhHHHHHHHHHHHHHhhcC
Q psy14863        261 NDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVINIIHSLL  319 (319)
Q Consensus       261 ~Ei~iL~r~~l~lsF~~~~~~q~~lPel~hivtlL~~~Gp~~~R~svh~l~iN~~hsL~  319 (319)
                      +|..++.|..+..+|.+.+.+|+|+||++|||++|+++||.++|.+.|.++||+|||+.
T Consensus      2206 s~~ti~~k~~v~~~~~s~lls~m~l~eil~~vs~lidv~~k~l~s~~~qlLm~~~~~~l 2264 (2724)
T KOG1826|consen 2206 SELTILVKISVHVFFESSLLSQMYLPEILFIVSLLIDVGPKELRSSLHQLLMNVCHSLL 2264 (2724)
T ss_pred             hcchhhhcchhhhhhhhhhhhhchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999973

>KOG1826|consensus

Probab=99.84  E-value=1.2e-21  Score=214.87  Aligned_cols=176  Identities=22%  Similarity=0.325  Sum_probs=163.4

Q ss_pred             CCCchhHHHHHHHHHHH-----------HHHHHHhh-chhhhHHHHHHHHHHHhhhcCCCCcchHHHHHHHHHhhcchhH
Q psy14863         40 HPNSTTITRTTRLLTSI-----------LGYFYVSL-LVPELIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANVQ  107 (319)
Q Consensus        40 ~~~~~tISRi~RlL~~L-----------l~~~w~l~-~~~~Li~ivldE~I~~Ald~g~gs~~~Eiia~i~vsLsS~~v~  107 (319)
                      -.+|+.+|++.|.+.+|           +.+.|... .++++.+.++||.+.+|.+++.++++|-..  +.+++  ++.+
T Consensus      2101 ~~~~~~~Se~~~~liRLSv~Efs~pkfYL~fg~s~lks~~~ltfr~~~~~~s~a~~~~s~~~~~l~a--l~tv~--pt~e 2176 (2724)
T KOG1826|consen 2101 EEGPENISEIFRILIRLSVREFSFPKFYLQFGWSLLKSDGRLTFRIVDEVISHALERDSENRDWLKA--LLTVL--PTTE 2176 (2724)
T ss_pred             ccCchhHHHHHHHHHhhccccccchHHHHHHHHHHHHhcceeeeeeehhcccccccccchhhhhHHH--HHhhc--chHH
Confidence            46899999999999998           66667655 899999999999999999999999999875  66666  4556


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCCCccc-cCChHHHHHHHHHHHHhhccchhhHhhhhhHHHHHHHHhhccCCchhHHhHh
Q psy14863        108 LVAKKIIVRLCRVLEKTGATPMPSLEQ-HTLWNDIAIMARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSH  186 (319)
Q Consensus       108 lV~gkIIsRLrk~i~~Ts~~Ps~~L~~-h~~W~EI~IL~R~~l~LsF~n~l~aq~yLPEifhIVTLLi~~Gp~~vR~svh  186 (319)
                       |+..+|-|++..+.  ++.|+..+++ .++|+|..+++|+.+..+|.+.+..|+|+|||+|||++|+++||.++|++.|
T Consensus      2177 -v~~~ai~kii~~~k--~~lp~~el~~~~~s~s~~ti~~k~~v~~~~~s~lls~m~l~eil~~vs~lidv~~k~l~s~~~ 2253 (2724)
T KOG1826|consen 2177 -VANNAIQKIIAKIK--SFLPSLELEAMTQSWSELTILVKISVHVFFESSLLSQMYLPEILFIVSLLIDVGPKELRSSLH 2253 (2724)
T ss_pred             -HHHHHHHHHHHHHH--hhCchhHHHHHHHHhhcchhhhcchhhhhhhhhhhhhchHHHHHHHHHHHHHhhhhhhhhHHH
Confidence             88899999999998  7999999998 7799999999999999999999999999999999999999999999999999


Q ss_pred             HhHHHH-hhhcccccHH--------------HHHHHHHHhhhhhhhccccc
Q psy14863        187 GLVIRM-HTLWNDIAIM--------------ARYLLMLSFNNCLDVVRHLP  222 (319)
Q Consensus       187 gLliNt-hSL~t~~~L~--------------~~~~l~~~~~~~~d~~~~~~  222 (319)
                      .++||+ ||+.|+.+++              ++||+++..+|.+||||.||
T Consensus      2254 qlLm~~~~~~lt~~q~~lr~~s~l~~alfw~A~q~lq~de~~~y~~G~aLl 2304 (2724)
T KOG1826|consen 2254 QLLMNVCHSLLTNSQLPLRHRSNLDEALFWFAHQKLQFDEGFSYDKGRALL 2304 (2724)
T ss_pred             HHHHHHHHHHHhccCcccCCCCcHHHHHHHHHHHHHhhhhhccccchhHHH
Confidence            999999 9999999988              99999999999999999999

>PF03378 CAS_CSE1: CAS/CSE protein, C-terminus; InterPro: IPR005043 Mammalian cellular apoptosis susceptibility (CAS) proteins and the yeast chromosome-segregation protein, CSE1 are homologous []

Probab=85.48  E-value=2.1  Score=43.71  Aligned_cols=70  Identities=26%  Similarity=0.524  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHHHHhhhcCCCCCCccccCChHHHHHHHHHHHH------hhccchh----------hHhhhhhHHHHHHHH
Q psy14863        109 VAKKIIVRLCRVLEKTGATPMPSLEQHTLWNDIAIMARYLLM------LSFNNCL----------DVVRHLPYLLHIVTM  172 (319)
Q Consensus       109 V~gkIIsRLrk~i~~Ts~~Ps~~L~~h~~W~EI~IL~R~~l~------LsF~n~l----------~aq~yLPEifhIVTL  172 (319)
                      .+..++.+|..+++..+.+|++.-..|-.|.-|++|+|++..      -.|++.+          +++-|.|++|-|.+.
T Consensus        64 ~~~~il~~L~~il~~v~kNPsnP~FnHylFEsi~~lir~~~~~~~~~v~~~E~~L~P~f~~ILq~dV~EF~PYvfQIla~  143 (435)
T PF03378_consen   64 IAVEILQHLTAILKEVSKNPSNPRFNHYLFESIGALIRFVCEADPEAVSQFEEALFPPFQEILQQDVQEFIPYVFQILAQ  143 (435)
T ss_dssp             GHHHHHHHHHHHHHHHHTS---HHHHHHHHHHHHHHHHHS-GGGHH---HHHHHHHHHHHHHHHTT-TTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCcchhhhHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999553      2455433          245699999999999


Q ss_pred             hhccCC
Q psy14863        173 LVNTGP  178 (319)
Q Consensus       173 Li~~Gp  178 (319)
                      |...+|
T Consensus       144 Lle~~~  149 (435)
T PF03378_consen  144 LLELRP  149 (435)
T ss_dssp             HHHHSS
T ss_pred             HHHcCC
Confidence            999998

CAS is involved in both cellular apoptosis and proliferation [, ]. Apoptosis is inhibited in CAS-depleted cells, while the expression of CAS correlates to the degree of cellular proliferation. Like CSE1, it is essential for the mitotic checkpoint in the cell cycle (CAS depletion blocks the cell in the G2 phase), and has been shown to be associated with the microtubule network and the mitotic spindle [], as is the protein MEK, which is thought to regulate the intracellular localization (predominantly nuclear vs. predominantly cytosolic) of CAS. In the nucleus, CAS acts as a nuclear transport factor in the importin pathway []. The importin pathway mediates the nuclear transport of several proteins that are necessary for mitosis and further progression. CAS is therefore thought to affect the cell cycle through its effect on the nuclear transport of these proteins []. Since apoptosis also requires the nuclear import of several proteins (such as P53 and transcription factors), it has been suggested that CAS also enables apoptosis by facilitating the nuclear import of at least a subset of these essential proteins []. This entry represents the C-terminal portion of these proteins. Structural studies of the yeast CSE1 protein indicate that this domain binds to both the transport-orchestrating protein RanGTP and the cargo molecule that is being exported [].; GO: 0005515 protein binding; PDB: 1Z3H_B 1WA5_C.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	319
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.4 bits (109), Expect = 1e-05
 Identities = 52/359 (14%), Positives = 106/359 (29%), Gaps = 88/359 (24%)

Query: 7   LLWHFKQLDGAVGLSFKANFHFALVGHLMKG----------YRHPNSTTITRTTRLLTSI 56
           +L  F+        +F  NF    V  + K               +   ++ T RL  ++
Sbjct: 21  ILSVFED-------AFVDNFDCKDVQDMPKSILSKEEIDHIIMSKD--AVSGTLRLFWTL 71

Query: 57  LGY-------FYVSLLVPE---LIDMVLDSFLQRSLESGVNSTVVEILADTAVALASANV 106
           L         F   +L      L+  +     Q S+ + +     + L +     A  NV
Sbjct: 72  LSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNV 131

Query: 107 QLVAKKIIVRLCRVLEKTGATPMPSLEQH--------TLWNDIAIMARYLLM-------L 151
                +  ++L + L +    P  ++            +  D+ +  +           L
Sbjct: 132 S--RLQPYLKLRQALLE--LRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWL 187

Query: 152 SFNNCL---DVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVIRMHTLWNDIAIMARYLLM 208
           +  NC     V+  L  LL+ +           R   H   I++    + I    R LL 
Sbjct: 188 NLKNCNSPETVLEMLQKLLYQID-----PNWTSRSD-HSSNIKLRI--HSIQAELRRLLK 239

Query: 209 L-SFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVITPMPSLEQHTLWNDIAIM- 266
              + NCL V+ ++                N+ C    L+ T               +  
Sbjct: 240 SKPYENCLLVLLNVQNAKAWNAF-------NLSCKI--LLTT-----------RFKQVTD 279

Query: 267 ------ARYLLMLSFNNCLDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGLVINIIHSLL 319
                   ++ +   +  L        LL  +       P  +  +++   ++II   +
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREV-LTTNPRRLSIIAESI 337

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 8e-04
 Identities = 55/392 (14%), Positives = 111/392 (28%), Gaps = 115/392 (29%)

Query: 7   LLWHFKQ-----LDGAVGLSFKANFHFALVGHLMKGYRHPNSTT---ITRTTRLLTSILG 58
           L W         +   V    + N+ F L+  +    R P+  T   I +  RL      
Sbjct: 67  LFWTLLSKQEEMVQKFVEEVLRINYKF-LMSPIKTEQRQPSMMTRMYIEQRDRLYND--N 123

Query: 59  YFYVSLLVP--ELIDMVLDSFLQRSLESGVNSTVVE--------ILADTAVALASANVQL 108
             +    V   +    +  + L+      V   +++         +A       S  VQ 
Sbjct: 124 QVFAKYNVSRLQPYLKLRQALLELRPAKNV---LIDGVLGSGKTWVA--LDVCLSYKVQC 178

Query: 109 ----------VAK--------KIIVRLCRVLEK---TGATPMPSLEQHTLWNDIAIMARY 147
                     +          +++ +L   ++    + +    +++     + I    R 
Sbjct: 179 KMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI--HSIQAELRR 236

Query: 148 LLML-SFNNCLDVVRHLPYLLHI------VTMLVNT---GPLNMRCSSHGLVIRM-HTLW 196
           LL    + NCL V+ ++              +L+ T      +   ++    I + H   
Sbjct: 237 LLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSM 296

Query: 197 -----NDIAIMARYL----------------LMLS--------FNNCLDVVRHLPY--LL 225
                   +++ +YL                  LS             D  +H+    L 
Sbjct: 297 TLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLT 356

Query: 226 HIVTMLVNT-GPLNMRCSSHGLVI----TPMPS--LEQHTLWNDIAIMARYLLMLSFNNC 278
            I+   +N   P   R     L +      +P+  L    +W D          +  ++ 
Sbjct: 357 TIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLS--LIWFD----------VIKSDV 404

Query: 279 LDVVRHLPYLLHIVTMLVNTGPLNMRCSSHGL 310
           + VV  L         LV   P     S   +
Sbjct: 405 MVVVNKL-----HKYSLVEKQPKESTISIPSI 431

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00