Psyllid ID: psy14967

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------17
Protein Sequence
MSLVPLLFRDWWDDFDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRPWRSLARSNSGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRVSTRFYFFSLKLNFQF
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccEEEEcccccccccccEEEEEccEEEEEEEEcEEEccccEEEEEEEEEEcccccccccccEEEEccccEEEEEcccccccccccEEEEEEEEc
Secondary Structure Prediction (SSPRO)
cccHHHHHcccccccccccHHHHHHccccccHHHcccccccccccccccccccccccHHHccccccccEEEcccccEEEEEEEccccccEEEEEEEccEEEEEEcccccccccccEEHHHEEEEEccccccHHHEEEEEccccEEEEEccccccccccccEEEEEEEc
Coil and Loop (DISEMBL)
mslvpllfrdwwddfdrpsrlldqhfglglrrddLLSNWSSLAQsarpigagylrpwrslarsnsgvsnitneenKVQVILDVqqfspneisiktVDGFILvegkheekedehgfisrqfkrryllpkdveIEKVTSslssdgvltitapkrvstrFYFFSLKLNFQF
Flexible Loop (DISEMBL)
MSLVPLLFRDWWDDFDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRPWRSLARSNSGvsnitneenkVQVILDVQQFSPNEISIKTVDGFILVEGkheekedehgfisrqfkrryllpKDVEIEkvtsslssdgvltitapkrvstRFYFFSLKLNFQF
Low Complexity Region (SEG)
MSLVPLLFRDWWDDFDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRPWRSLARSNSGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVegkheekedehgFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRVSTRFYFFSLKLNFQF
Disordered region (IsUnstruct)
**LVPLLFRDWWDDFDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRPWRSLAR****VSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGK*******HGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRVSTRFYFFSLKLNF**
Disordered Region (DISOPRED)
MSLVPLLFRDWWDDFDRPSRLLDQHFGLGLRRDDLLSNWSSLA*****************************EENKVQVILDVQQFSPNEISIKTVDGFILVE***********FISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITA************LKLNFQ*
Disordered Region (DISEMBL)
MSLVPLLFRDWWDDFDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRPWRSLARSNSGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGK*********FISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRVSTRFYFFSLKLNFQF
Disordered Region (DISPRO)
*SLVPLLFRDWWDDFDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRPWRSLARSNSGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRVSTRFYFFSLKLNFQF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSLVPLLFRDWWDDFDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRPWRSLARSNSGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRVSTRFYFFSLKLNFQF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	168	2.2.26 [Sep-21-2011]
P82147	187	Protein lethal(2)essentia	yes	N/A	0.886	0.796	0.603	4e-47
Q9EPF3	175	Alpha-crystallin B chain	N/A	N/A	0.797	0.765	0.451	2e-27
P23928	175	Alpha-crystallin B chain	yes	N/A	0.797	0.765	0.451	5e-27
P05811	175	Alpha-crystallin B chain	N/A	N/A	0.797	0.765	0.444	8e-27
P23927	175	Alpha-crystallin B chain	yes	N/A	0.779	0.748	0.460	1e-26
P02504	173	Alpha-crystallin A chain	yes	N/A	0.744	0.722	0.463	1e-26
Q90497	149	Alpha-crystallin A chain	N/A	N/A	0.744	0.838	0.463	1e-26
P02505	173	Alpha-crystallin A chain	N/A	N/A	0.744	0.722	0.463	2e-26
O12984	149	Alpha-crystallin A chain	N/A	N/A	0.744	0.838	0.455	3e-26
Q5R9K0	175	Alpha-crystallin B chain	yes	N/A	0.779	0.748	0.453	3e-26

>sp|P82147|L2EFL_DROME Protein lethal(2)essential for life OS=Drosophila melanogaster GN=l(2)efl PE=1 SV=1

 Score =  187 bits (474), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 96/159 (60%), Positives = 119/159 (74%), Gaps = 10/159 (6%)

Query: 1   MSLVPLLFRDWWDDFDRP---SRLLDQHFGLGLRRDDLLSN-WSSLAQSARPIGAGYLRP 56
           MS+VPL+FRDWWD+ D P   SRLLDQHFG GL+RDDL+S+ W+S     R   +GYLRP
Sbjct: 1   MSVVPLMFRDWWDELDFPMRTSRLLDQHFGQGLKRDDLMSSVWNSRPTVLR---SGYLRP 57

Query: 57  WR--SLARSNSGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHG 114
           W   SL +  SG S +  +  K +VILDVQQFSP+EI++K  D F++VEGKHEEK+DEHG
Sbjct: 58  WHTNSLQKQESG-STLNIDSEKFEVILDVQQFSPSEITVKVADKFVIVEGKHEEKQDEHG 116

Query: 115 FISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRV 153
           ++SRQF RRY LP DV  + VTSSLSSDG+LTI AP + 
Sbjct: 117 YVSRQFSRRYQLPSDVNPDTVTSSLSSDGLLTIKAPMKA 155

Vital role in embryonic development.
Drosophila melanogaster (taxid: 7227)

>sp|Q9EPF3|CRYAB_SPAJD Alpha-crystallin B chain OS=Spalax judaei GN=CRYAB PE=2 SV=1

 Score =  121 bits (304), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/144 (45%), Positives = 94/144 (65%), Gaps = 10/144 (6%)

Query: 15  FDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRP---WRSLARSNSGVSNIT 71
           F  PSRL DQ FG  L   DL S  +SL+         YLRP   +R+ +  ++G+S + 
Sbjct: 17  FHSPSRLFDQFFGEHLLESDLFSTSTSLS-------PFYLRPPSFFRAPSWIDTGLSEMR 69

Query: 72  NEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVE 131
            E++++ V LDV+ FSP E+ +K +   I V GKHEE++DEHGFISR+F R+Y +P DV+
Sbjct: 70  MEKDRLSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVD 129

Query: 132 IEKVTSSLSSDGVLTITAPKRVST 155
              +TSSLSSDGVLT+  P++ ++
Sbjct: 130 PLTITSSLSSDGVLTVNGPRKQAS 153

May contribute to the transparency and refractive index of the lens.

Spalax judaei (taxid: 134510)

>sp|P23928|CRYAB_RAT Alpha-crystallin B chain OS=Rattus norvegicus GN=Cryab PE=1 SV=1

 Score =  120 bits (300), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 65/144 (45%), Positives = 92/144 (63%), Gaps = 10/144 (6%)

Query: 15  FDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRP---WRSLARSNSGVSNIT 71
           F  PSRL DQ FG  L   DL S  +SL+         YLRP    R+ +  ++G+S + 
Sbjct: 17  FHSPSRLFDQFFGEHLLESDLFSTATSLS-------PFYLRPPSFLRAPSWIDTGLSEMR 69

Query: 72  NEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVE 131
            E+++  V LDV+ FSP E+ +K +   I V GKHEE++DEHGFISR+F R+Y +P DV+
Sbjct: 70  MEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVD 129

Query: 132 IEKVTSSLSSDGVLTITAPKRVST 155
              +TSSLSSDGVLT+  P++ ++
Sbjct: 130 PLTITSSLSSDGVLTVNGPRKQAS 153

May contribute to the transparency and refractive index of the lens.

Rattus norvegicus (taxid: 10116)

>sp|P05811|CRYAB_MESAU Alpha-crystallin B chain OS=Mesocricetus auratus GN=CRYAB PE=2 SV=1

 Score =  119 bits (299), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 64/144 (44%), Positives = 92/144 (63%), Gaps = 10/144 (6%)

Query: 15  FDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRP---WRSLARSNSGVSNIT 71
           F  PSRL DQ FG  L   DL S  +SL+         YLRP    R+ +  ++G+S + 
Sbjct: 17  FHSPSRLFDQFFGEHLLESDLFSTATSLS-------PFYLRPPSFLRAPSWIDTGLSEMR 69

Query: 72  NEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVE 131
            E+++  V LDV+ FSP E+ +K +   + V GKHEE++DEHGFISR+F R+Y +P DV+
Sbjct: 70  MEKDRFSVNLDVKHFSPEELKVKVLGDVVEVHGKHEERQDEHGFISREFHRKYRIPADVD 129

Query: 132 IEKVTSSLSSDGVLTITAPKRVST 155
              +TSSLSSDGVLT+  P++ ++
Sbjct: 130 PLTITSSLSSDGVLTVNGPRKQAS 153

May contribute to the transparency and refractive index of the lens.

Mesocricetus auratus (taxid: 10036)

>sp|P23927|CRYAB_MOUSE Alpha-crystallin B chain OS=Mus musculus GN=Cryab PE=1 SV=2

 Score =  119 bits (298), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/141 (46%), Positives = 90/141 (63%), Gaps = 10/141 (7%)

Query: 15  FDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRP---WRSLARSNSGVSNIT 71
           F  PSRL DQ FG  L   DL S  +SL+         YLRP    R+ +  ++G+S + 
Sbjct: 17  FHSPSRLFDQFFGEHLLESDLFSTATSLS-------PFYLRPPSFLRAPSWIDTGLSEMR 69

Query: 72  NEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVE 131
            E+++  V LDV+ FSP E+ +K +   I V GKHEE++DEHGFISR+F R+Y +P DV+
Sbjct: 70  LEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVD 129

Query: 132 IEKVTSSLSSDGVLTITAPKR 152
              +TSSLSSDGVLT+  P++
Sbjct: 130 PLTITSSLSSDGVLTVNGPRK 150

May contribute to the transparency and refractive index of the lens.

Mus musculus (taxid: 10090)

>sp|P02504|CRYAA_CHICK Alpha-crystallin A chain OS=Gallus gallus GN=CRYAA PE=1 SV=2

 Score =  119 bits (298), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/136 (46%), Positives = 90/136 (66%), Gaps = 11/136 (8%)

Query: 18  PSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRPWRSLARS--NSGVSNITNEEN 75
           PSRL DQ FG GL   DLL  +SS         + Y R  +SL RS   SG+S + ++ +
Sbjct: 19  PSRLFDQFFGEGLLEYDLLPLFSSTI-------SPYYR--QSLFRSVLESGISEVRSDRD 69

Query: 76  KVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKV 135
           K  ++LDV+ FSP ++S+K +D F+ + GKH E++D+HG+ISR+F RRY LP +V+   +
Sbjct: 70  KFTIMLDVKHFSPEDLSVKIIDDFVEIHGKHSERQDDHGYISREFHRRYRLPANVDQSAI 129

Query: 136 TSSLSSDGVLTITAPK 151
           T SLSSDG+LT + PK
Sbjct: 130 TCSLSSDGMLTFSGPK 145

May contribute to the transparency and refractive index of the lens.

Gallus gallus (taxid: 9031)

>sp|Q90497|CRYAA_EUDEL Alpha-crystallin A chain (Fragment) OS=Eudromia elegans GN=CRYAA PE=2 SV=1

 Score =  118 bits (296), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/136 (46%), Positives = 89/136 (65%), Gaps = 11/136 (8%)

Query: 18  PSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRPWRSLARS--NSGVSNITNEEN 75
           PSRL DQ FG GL   DLL  +SS         + Y R  +SL RS   SG+S + ++  
Sbjct: 8   PSRLFDQFFGEGLLEYDLLPLFSSTI-------SPYYR--QSLFRSVLESGISEVRSDRE 58

Query: 76  KVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKV 135
           K  ++LDV+ FSP ++S+K +D F+ + GKH E++D+HG+ISR+F RRY LP +V+   +
Sbjct: 59  KFTIMLDVKHFSPEDLSVKIIDDFVEIHGKHSERQDDHGYISREFHRRYRLPSNVDQSAI 118

Query: 136 TSSLSSDGVLTITAPK 151
           T SLSSDG+LT + PK
Sbjct: 119 TCSLSSDGMLTFSGPK 134

May contribute to the transparency and refractive index of the lens.

Eudromia elegans (taxid: 8805)

>sp|P02505|CRYAA_RHEAM Alpha-crystallin A chain OS=Rhea americana GN=CRYAA PE=1 SV=1

 Score =  118 bits (296), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 63/136 (46%), Positives = 89/136 (65%), Gaps = 11/136 (8%)

Query: 18  PSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRPWRSLARS--NSGVSNITNEEN 75
           PSRL DQ FG GL   DLL  +SS         + Y R  +SL RS   SG+S + ++  
Sbjct: 19  PSRLFDQFFGEGLLEYDLLPLFSSTI-------SPYYR--QSLFRSVLESGISEVRSDRE 69

Query: 76  KVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKV 135
           K  ++LDV+ FSP ++S+K +D F+ + GKH E++D+HG+ISR+F RRY LP +V+   +
Sbjct: 70  KFTIMLDVKHFSPEDLSVKIIDDFVEIHGKHSERQDDHGYISREFHRRYRLPSNVDQSAI 129

Query: 136 TSSLSSDGVLTITAPK 151
           T SLSSDG+LT + PK
Sbjct: 130 TCSLSSDGMLTFSGPK 145

May contribute to the transparency and refractive index of the lens.

Rhea americana (taxid: 8797)

>sp|O12984|CRYAA_ANAPL Alpha-crystallin A chain (Fragment) OS=Anas platyrhynchos GN=CRYAA PE=2 SV=1

 Score =  117 bits (294), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/136 (45%), Positives = 89/136 (65%), Gaps = 11/136 (8%)

Query: 18  PSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRPWRSLARS--NSGVSNITNEEN 75
           PSRL DQ FG GL   DLL  +SS         + Y R  +SL RS   SG+S + ++ +
Sbjct: 8   PSRLFDQFFGEGLLEYDLLPLFSSTI-------SPYYR--QSLFRSVLESGISEVRSDRD 58

Query: 76  KVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKV 135
           K  ++LDV+ FSP ++S+K +D F+ + GKH E++D+HG+ISR+F RRY LP +V+   +
Sbjct: 59  KFTIMLDVKHFSPEDLSVKIIDDFVEIHGKHSERQDDHGYISREFHRRYRLPANVDQSAI 118

Query: 136 TSSLSSDGVLTITAPK 151
           T SLS DG+LT + PK
Sbjct: 119 TCSLSGDGMLTFSGPK 134

May contribute to the transparency and refractive index of the lens.

Anas platyrhynchos (taxid: 8839)

>sp|Q5R9K0|CRYAB_PONAB Alpha-crystallin B chain OS=Pongo abelii GN=CRYAB PE=2 SV=1

 Score =  117 bits (293), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 64/141 (45%), Positives = 89/141 (63%), Gaps = 10/141 (7%)

Query: 15  FDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRP---WRSLARSNSGVSNIT 71
           F  PSRL DQ FG  L   DL    +SL+         YLRP    R+ +  ++G+S + 
Sbjct: 17  FHSPSRLFDQFFGEHLLESDLFPTSTSLS-------PFYLRPPSFLRAPSWFDTGLSEMR 69

Query: 72  NEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVE 131
            E+++  V LDV+ FSP E+ +K +   I V GKHEE++DEHGFISR+F R+Y +P DV+
Sbjct: 70  LEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVD 129

Query: 132 IEKVTSSLSSDGVLTITAPKR 152
              +TSSLSSDGVLT+  P++
Sbjct: 130 PLTITSSLSSDGVLTVNGPRK 150

May contribute to the transparency and refractive index of the lens.

Pongo abelii (taxid: 9601)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	168
193688392	197	PREDICTED: protein lethal(2)essential fo	0.898	0.766	0.673	1e-52
242015113	189	protein lethal, putative [Pediculus huma	0.892	0.793	0.649	1e-52
239788368	174	ACYPI009959 [Acyrthosiphon pisum]	0.898	0.867	0.673	2e-52
156553185	169	PREDICTED: protein lethal(2)essential fo	0.857	0.852	0.633	2e-49
121543991	195	lethal(2)essential for life protein-like	0.892	0.769	0.645	3e-49
307178750	1004	High affinity cAMP-specific and IBMX-ins	0.922	0.154	0.598	1e-48
194755138	187	GF11829 [Drosophila ananassae] gi|190621	0.875	0.786	0.641	1e-47
157135561	192	lethal(2)essential for life protein, l2e	0.898	0.786	0.585	1e-47
157135559	214	lethal(2)essential for life protein, l2e	0.898	0.705	0.585	1e-47
332022897	197	Protein lethal(2)essential for life [Acr	0.898	0.766	0.611	2e-47

>gi|193688392|ref|XP_001951309.1| PREDICTED: protein lethal(2)essential for life-like [Acyrthosiphon pisum]

 Score =  211 bits (536), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 105/156 (67%), Positives = 124/156 (79%), Gaps = 5/156 (3%)

Query: 1   MSLVPLLFRDWWDDFDR---PSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRPW 57
           MSLVPL FRDWW+DF+R   P RLLDQHFGLGL RDDL SN +S   S     A Y RPW
Sbjct: 1   MSLVPLFFRDWWEDFERERLPRRLLDQHFGLGLHRDDL-SNLTSALSSPSLRSATYYRPW 59

Query: 58  RS-LARSNSGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFI 116
           +  L R NSG SN+  +E +VQVILDVQQF P EI++KT +G I+VEGKHEEK+DEHGFI
Sbjct: 60  QGVLNRQNSGTSNLKFDEKQVQVILDVQQFGPGEITVKTSEGAIIVEGKHEEKQDEHGFI 119

Query: 117 SRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKR 152
           SRQFKRRYLLPKDV+IE++ SSLSSDG+LT++ PK+
Sbjct: 120 SRQFKRRYLLPKDVDIEQIVSSLSSDGILTVSVPKK 155

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242015113|ref|XP_002428218.1| protein lethal, putative [Pediculus humanus corporis] gi|212512779|gb|EEB15480.1| protein lethal, putative [Pediculus humanus corporis]

 Score =  210 bits (535), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 100/154 (64%), Positives = 127/154 (82%), Gaps = 4/154 (2%)

Query: 1   MSLVPLLFRDWWDDFDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRPWRSL 60
           MSLVPLL+RDWWDDFDRP +L DQ+FGLGLRRDDL+S   SL  S   + +GYLRPWR L
Sbjct: 1   MSLVPLLYRDWWDDFDRPMKLFDQNFGLGLRRDDLVS---SLFNSPM-LRSGYLRPWREL 56

Query: 61  ARSNSGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQF 120
           +R +SG S + ++++K QVILDVQQF+P+EI +KT +  +LVEGKHEEK+DEHGFISR F
Sbjct: 57  SRQSSGSSTVQSDKDKFQVILDVQQFAPSEIVVKTQNNVVLVEGKHEEKQDEHGFISRHF 116

Query: 121 KRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRVS 154
            R+Y+LP D+E+  +TSSLSSDGVLTI+APK+ +
Sbjct: 117 VRKYVLPSDIEVSNITSSLSSDGVLTISAPKKTT 150

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|239788368|dbj|BAH70870.1| ACYPI009959 [Acyrthosiphon pisum]

 Score =  209 bits (533), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 105/156 (67%), Positives = 124/156 (79%), Gaps = 5/156 (3%)

Query: 1   MSLVPLLFRDWWDDFDR---PSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRPW 57
           MSLVPL FRDWW+DF+R   P RLLDQHFGLGL RDDL SN +S   S     A Y RPW
Sbjct: 1   MSLVPLFFRDWWEDFERERLPRRLLDQHFGLGLHRDDL-SNLTSALSSPSLRSATYYRPW 59

Query: 58  RS-LARSNSGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFI 116
           +  L R NSG SN+  +E +VQVILDVQQF P EI++KT +G I+VEGKHEEK+DEHGFI
Sbjct: 60  QGVLNRQNSGTSNLKFDEKQVQVILDVQQFGPGEITVKTSEGAIIVEGKHEEKQDEHGFI 119

Query: 117 SRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKR 152
           SRQFKRRYLLPKDV+IE++ SSLSSDG+LT++ PK+
Sbjct: 120 SRQFKRRYLLPKDVDIEQIVSSLSSDGILTVSVPKK 155

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156553185|ref|XP_001600020.1| PREDICTED: protein lethal(2)essential for life-like [Nasonia vitripennis]

 Score =  199 bits (507), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 95/150 (63%), Positives = 115/150 (76%), Gaps = 6/150 (4%)

Query: 1   MSLVPLLFRDWWDDFDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRPWRSL 60
           M+L+P +FRDWWDD DRPSRL+DQHFG+GL RD+LL   S       P   GY RPWR+L
Sbjct: 1   MALIPTMFRDWWDDLDRPSRLMDQHFGMGLTRDELLHTLSV------PSFRGYFRPWRNL 54

Query: 61  ARSNSGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQF 120
                GVS + ++++K QVI+DVQQF P EIS+KTVD  I+VE KHEEK+DEHGFISRQF
Sbjct: 55  LEQTGGVSRVQSDKDKFQVIIDVQQFGPQEISVKTVDNCIIVEAKHEEKKDEHGFISRQF 114

Query: 121 KRRYLLPKDVEIEKVTSSLSSDGVLTITAP 150
           +RRY+LP+  +I  V SSLSSDGVLTITAP
Sbjct: 115 QRRYVLPEGHDIGNVQSSLSSDGVLTITAP 144

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|121543991|gb|ABM55659.1| lethal(2)essential for life protein-like protein [Maconellicoccus hirsutus]

 Score =  199 bits (506), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 104/161 (64%), Positives = 123/161 (76%), Gaps = 11/161 (6%)

Query: 1   MSLVPLLFRDWWDDFD-----RPSRLLDQHFGLGLRRDDLLSNWSSLAQS-ARPIGAGYL 54
           MSLVPLLFRDWWDDFD     RPSRLLDQHFGLGL++DDLL+NWSSL+    RP    Y 
Sbjct: 1   MSLVPLLFRDWWDDFDGFERERPSRLLDQHFGLGLKKDDLLNNWSSLSSPLIRP--GRYF 58

Query: 55  RPWRSL-ARSNSGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEH 113
           RPW+ L  R  SG S I NE    ++ILDVQQF+P+EI++K VDG I VEGKHEEK+DEH
Sbjct: 59  RPWKELIPRQTSGSSLIKNEGKAFEIILDVQQFTPSEITVKVVDGSITVEGKHEEKQDEH 118

Query: 114 GFISRQFKRRYLLP--KDVEIEKVTSSLSSDGVLTITAPKR 152
           G+ISR F RRY+ P  +D++I  V SSLSSDGVLTI+ PK+
Sbjct: 119 GYISRHFVRRYVPPSSQDLDINNVVSSLSSDGVLTISVPKK 159

Source: Maconellicoccus hirsutus

Species: Maconellicoccus hirsutus

Genus: Maconellicoccus

Family: Pseudococcidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307178750|gb|EFN67364.1| High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B [Camponotus floridanus]

 Score =  197 bits (501), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 97/162 (59%), Positives = 124/162 (76%), Gaps = 7/162 (4%)

Query: 1   MSLVPLLFRDWWDDFDRP-SRLLDQHFGLGLRRDDLLSNWSS-LAQSARPI----GAGYL 54
           MS+VPL+FRDWWDD DRP SRL DQHFG GL RDDL+SN++S L  +  P+    G  Y 
Sbjct: 810 MSIVPLVFRDWWDDIDRPISRLADQHFGTGLHRDDLISNFTSGLGFNRAPLRSIFGNTYY 869

Query: 55  RPWRSLARSNS-GVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEH 113
           RPW+++ R NS G S I  + +  QVILDVQQFSP+EI++KTVD +++VE KHEE++DEH
Sbjct: 870 RPWKNVTRHNSSGSSTIQLDNDNFQVILDVQQFSPDEITVKTVDNYVIVEAKHEERQDEH 929

Query: 114 GFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRVST 155
           G+ISR F RRY+LP   ++  VTS+LSSDGVLT+TAPK+  T
Sbjct: 930 GYISRHFVRRYVLPPSHDLVNVTSTLSSDGVLTVTAPKKNVT 971

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194755138|ref|XP_001959849.1| GF11829 [Drosophila ananassae] gi|190621147|gb|EDV36671.1| GF11829 [Drosophila ananassae]

 Score =  194 bits (492), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 102/159 (64%), Positives = 123/159 (77%), Gaps = 12/159 (7%)

Query: 1   MSLVPLLFRDWWDDFDRP---SRLLDQHFGLGLRRDDLLSN-WSSLAQSARPIGAGYLRP 56
           MS+VPL+FRDWWD+ D P   SRLLDQHFG GL+RDDL+S+ W+S     R   +GYLRP
Sbjct: 1   MSVVPLMFRDWWDELDFPMRTSRLLDQHFGQGLKRDDLMSSVWNSRPTVLR---SGYLRP 57

Query: 57  WR--SLARSNSGVS-NITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEH 113
           W+  SL +  SG + NI NE  K +VILDVQQFSPNEI++K  D F++VEGKHEEK+DEH
Sbjct: 58  WQKNSLQKQESGSTLNIDNE--KFEVILDVQQFSPNEITVKVADKFVIVEGKHEEKQDEH 115

Query: 114 GFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKR 152
           GF+SRQF RRY LP DV  + VTSSLSSDG+LTITAP +
Sbjct: 116 GFVSRQFSRRYQLPSDVNPDTVTSSLSSDGLLTITAPMK 154

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157135561|ref|XP_001663499.1| lethal(2)essential for life protein, l2efl [Aedes aegypti] gi|108870193|gb|EAT34418.1| AAEL013341-PB [Aedes aegypti]

 Score =  194 bits (492), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 92/157 (58%), Positives = 121/157 (77%), Gaps = 6/157 (3%)

Query: 1   MSLVPLLFRDWWDDFDRP---SRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRPW 57
           MSLVP++FRDWWDDFD P   SRLLDQHFG GLR DDL S+ S+   ++  + +GY RPW
Sbjct: 1   MSLVPMMFRDWWDDFDSPLRSSRLLDQHFGTGLRADDLFSSLSTRTPTSTLLRSGYYRPW 60

Query: 58  R--SLARSNSGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGF 115
           R  +L R +SG S +  +++K Q+ILDVQQF+P EI++KT D +++VEGKHEEK+DEHGF
Sbjct: 61  RNTALTRQDSG-STLNLDKDKFQIILDVQQFTPEEITVKTTDKYVVVEGKHEEKQDEHGF 119

Query: 116 ISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKR 152
           +SR F RRY+LP   +   + S+LSSDGVLT+TAPK+
Sbjct: 120 VSRHFTRRYMLPSGHDPNDIVSTLSSDGVLTVTAPKK 156

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157135559|ref|XP_001663498.1| lethal(2)essential for life protein, l2efl [Aedes aegypti] gi|108870192|gb|EAT34417.1| AAEL013341-PA [Aedes aegypti]

 Score =  194 bits (492), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 92/157 (58%), Positives = 121/157 (77%), Gaps = 6/157 (3%)

Query: 1   MSLVPLLFRDWWDDFDRP---SRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRPW 57
           MSLVP++FRDWWDDFD P   SRLLDQHFG GLR DDL S+ S+   ++  + +GY RPW
Sbjct: 23  MSLVPMMFRDWWDDFDSPLRSSRLLDQHFGTGLRADDLFSSLSTRTPTSTLLRSGYYRPW 82

Query: 58  R--SLARSNSGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGF 115
           R  +L R +SG S +  +++K Q+ILDVQQF+P EI++KT D +++VEGKHEEK+DEHGF
Sbjct: 83  RNTALTRQDSG-STLNLDKDKFQIILDVQQFTPEEITVKTTDKYVVVEGKHEEKQDEHGF 141

Query: 116 ISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKR 152
           +SR F RRY+LP   +   + S+LSSDGVLT+TAPK+
Sbjct: 142 VSRHFTRRYMLPSGHDPNDIVSTLSSDGVLTVTAPKK 178

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332022897|gb|EGI63169.1| Protein lethal(2)essential for life [Acromyrmex echinatior]

 Score =  193 bits (490), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 96/157 (61%), Positives = 121/157 (77%), Gaps = 6/157 (3%)

Query: 1   MSLVPLLFRDWWDDFDRP-SRLLDQHFGLGLRRDDLLSNWSSLAQSARP---IGAGYLRP 56
           MS+VPL+FR+WWDDFDRP SRLLDQHFG+GL RDDL+S+ S L    RP    G  Y RP
Sbjct: 1   MSIVPLVFRNWWDDFDRPVSRLLDQHFGIGLHRDDLISSLSGLGLD-RPSVRFGNRYYRP 59

Query: 57  WRSLARSNS-GVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGF 115
           W ++ R NS G S I  + +  QVILDVQQFSP+EI++KT+D  ++VE KHEEK+DEHG+
Sbjct: 60  WGNVTRQNSSGTSTIQLDNDNFQVILDVQQFSPDEITVKTIDNHVVVEAKHEEKQDEHGY 119

Query: 116 ISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKR 152
           ISR F RRY+LP   ++  +TS+LSSDGVLT+TAPK+
Sbjct: 120 ISRHFVRRYVLPPSHDLVNITSTLSSDGVLTVTAPKK 156

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	168
FB|FBgn0011296	187	l(2)efl "lethal (2) essential	0.880	0.791	0.537	2.4e-37
UNIPROTKB|P02504	173	CRYAA "Alpha-crystallin A chai	0.744	0.722	0.419	4.4e-20
UNIPROTKB|Q9EPF3	175	CRYAB "Alpha-crystallin B chai	0.779	0.748	0.404	2.5e-19
ZFIN|ZDB-GENE-030326-4	199	hspb1 "heat shock protein, alp	0.553	0.467	0.404	6.4e-19
MGI|MGI:88516	175	Cryab "crystallin, alpha B" [M	0.791	0.76	0.416	8.3e-19
RGD|2414	175	Cryab "crystallin, alpha B" [R	0.779	0.748	0.404	8.3e-19
UNIPROTKB|P05811	175	CRYAB "Alpha-crystallin B chai	0.779	0.748	0.397	1.1e-18
UNIPROTKB|E9PR44	174	CRYAB "Alpha-crystallin B chai	0.791	0.764	0.409	2.8e-18
UNIPROTKB|P02511	175	CRYAB "Alpha-crystallin B chai	0.791	0.76	0.409	2.8e-18
UNIPROTKB|Q5R9K0	175	CRYAB "Alpha-crystallin B chai	0.791	0.76	0.409	2.8e-18

FB|FBgn0011296 l(2)efl "lethal (2) essential for life" [Drosophila melanogaster (taxid:7227)]

 Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
 Identities = 85/158 (53%), Positives = 107/158 (67%)

Query:     1 MSLVPLLFRDWWDDFDRP---SRLLDQHFGLGLRRDDLLSN-WSSLAQSARPIGAGYLRP 56
             MS+VPL+FRDWWD+ D P   SRLLDQHFG GL+RDDL+S+ W+S     R   +GYLRP
Sbjct:     1 MSVVPLMFRDWWDELDFPMRTSRLLDQHFGQGLKRDDLMSSVWNSRPTVLR---SGYLRP 57

Query:    57 WR--SLARSNSGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVXXXXXXXXXXXX 114
             W   SL +  SG S +  +  K +VILDVQQFSP+EI++K  D F++V            
Sbjct:    58 WHTNSLQKQESG-STLNIDSEKFEVILDVQQFSPSEITVKVADKFVIVEGKHEEKQDEHG 116

Query:   115 FISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKR 152
             ++SRQF RRY LP DV  + VTSSLSSDG+LTI AP +
Sbjct:   117 YVSRQFSRRYQLPSDVNPDTVTSSLSSDGLLTIKAPMK 154

GO:0009408 "response to heat" evidence=NAS

GO:0009790 "embryo development" evidence=NAS

GO:0010998 "regulation of translational initiation by eIF2 alpha phosphorylation" evidence=IMP

GO:0010506 "regulation of autophagy" evidence=IMP

GO:0006497 "protein lipidation" evidence=IMP

UNIPROTKB|P02504 CRYAA "Alpha-crystallin A chain" [Gallus gallus (taxid:9031)]

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 57/136 (41%), Positives = 81/136 (59%)

Query:    18 PSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRPWRSLARS--NSGVSNITNEEN 75
             PSRL DQ FG GL   DLL  +SS   +  P    Y R  +SL RS   SG+S + ++ +
Sbjct:    19 PSRLFDQFFGEGLLEYDLLPLFSS---TISP----YYR--QSLFRSVLESGISEVRSDRD 69

Query:    76 KVQVILDVQQFSPNEISIKTVDGFILVXXXXXXXXXXXXFISRQFKRRYLLPKDVEIEKV 135
             K  ++LDV+ FSP ++S+K +D F+ +            +ISR+F RRY LP +V+   +
Sbjct:    70 KFTIMLDVKHFSPEDLSVKIIDDFVEIHGKHSERQDDHGYISREFHRRYRLPANVDQSAI 129

Query:   136 TSSLSSDGVLTITAPK 151
             T SLSSDG+LT + PK
Sbjct:   130 TCSLSSDGMLTFSGPK 145

GO:0005212 "structural constituent of eye lens" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0000072 "M phase specific microtubule process" evidence=IEA

GO:0001666 "response to hypoxia" evidence=IEA

GO:0001934 "positive regulation of protein phosphorylation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007005 "mitochondrion organization" evidence=IEA

GO:0007015 "actin filament organization" evidence=IEA

GO:0007021 "tubulin complex assembly" evidence=IEA

GO:0010629 "negative regulation of gene expression" evidence=IEA

GO:0030307 "positive regulation of cell growth" evidence=IEA

GO:0032387 "negative regulation of intracellular transport" evidence=IEA

GO:0042542 "response to hydrogen peroxide" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IEA

GO:0048596 "embryonic camera-type eye morphogenesis" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0051260 "protein homooligomerization" evidence=IEA

GO:0060561 "apoptotic process involved in morphogenesis" evidence=IEA

GO:0070141 "response to UV-A" evidence=IEA

GO:0070309 "lens fiber cell morphogenesis" evidence=IEA

GO:0007601 "visual perception" evidence=ISS

UNIPROTKB|Q9EPF3 CRYAB "Alpha-crystallin B chain" [Nannospalax judaei (taxid:134510)]

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 57/141 (40%), Positives = 82/141 (58%)

Query:    15 FDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRP---WRSLARSNSGVSNIT 71
             F  PSRL DQ FG  L   DL S  +SL+    P    YLRP   +R+ +  ++G+S + 
Sbjct:    17 FHSPSRLFDQFFGEHLLESDLFSTSTSLS----PF---YLRPPSFFRAPSWIDTGLSEMR 69

Query:    72 NEENKVQVILDVQQFSPNEISIKTVDGFILVXXXXXXXXXXXXFISRQFKRRYLLPKDVE 131
              E++++ V LDV+ FSP E+ +K +   I V            FISR+F R+Y +P DV+
Sbjct:    70 MEKDRLSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVD 129

Query:   132 IEKVTSSLSSDGVLTITAPKR 152
                +TSSLSSDGVLT+  P++
Sbjct:   130 PLTITSSLSSDGVLTVNGPRK 150

GO:0005634 "nucleus" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0042803 "protein homodimerization activity" evidence=ISS

ZFIN|ZDB-GENE-030326-4 hspb1 "heat shock protein, alpha-crystallin-related, 1" [Danio rerio (taxid:7955)]

 Score = 179 (68.1 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
 Identities = 38/94 (40%), Positives = 57/94 (60%)

Query:    58 RSLARS-NSGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVXXXXXXXXXXXXFI 116
             R+L+R  +SG+S +    +  ++ LDV  FSP E+++KT DG + +            FI
Sbjct:    82 RALSRQLSSGMSEVKQTGDSWKISLDVNHFSPEELNVKTKDGVLEITGKHEERKDEHGFI 141

Query:   117 SRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAP 150
             SR F R+Y LP  V+ EK++S LS +GVLT+ AP
Sbjct:   142 SRCFTRKYTLPPGVDSEKISSCLSPEGVLTVEAP 175

GO:0006950 "response to stress" evidence=IEA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0009408 "response to heat" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0046685 "response to arsenic-containing substance" evidence=IDA

MGI|MGI:88516 Cryab "crystallin, alpha B" [Mus musculus (taxid:10090)]

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 60/144 (41%), Positives = 82/144 (56%)

Query:    15 FDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRP---WRSLARSNSGVSNIT 71
             F  PSRL DQ FG  L   DL S  +SL+    P    YLRP    R+ +  ++G+S + 
Sbjct:    17 FHSPSRLFDQFFGEHLLESDLFSTATSLS----PF---YLRPPSFLRAPSWIDTGLSEMR 69

Query:    72 NEENKVQVILDVQQFSPNEISIKTVDGFILVXXXXXXXXXXXXFISRQFKRRYLLPKDVE 131
              E+++  V LDV+ FSP E+ +K +   I V            FISR+F R+Y +P DV+
Sbjct:    70 LEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVD 129

Query:   132 IEKVTSSLSSDGVLTITAP-KRVS 154
                +TSSLSSDGVLT+  P K+VS
Sbjct:   130 PLTITSSLSSDGVLTVNGPRKQVS 153

GO:0001666 "response to hypoxia" evidence=IMP

GO:0002088 "lens development in camera-type eye" evidence=IGI

GO:0005212 "structural constituent of eye lens" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006006 "glucose metabolic process" evidence=ISO

GO:0006457 "protein folding" evidence=ISO

GO:0007021 "tubulin complex assembly" evidence=IMP

GO:0007517 "muscle organ development" evidence=IGI

GO:0008017 "microtubule binding" evidence=ISO

GO:0008092 "cytoskeletal protein binding" evidence=ISO

GO:0009986 "cell surface" evidence=ISO

GO:0010629 "negative regulation of gene expression" evidence=IMP

GO:0015630 "microtubule cytoskeleton" evidence=ISO

GO:0030018 "Z disc" evidence=IDA

GO:0030308 "negative regulation of cell growth" evidence=ISO

GO:0031109 "microtubule polymerization or depolymerization" evidence=ISO

GO:0031674 "I band" evidence=ISO

GO:0032387 "negative regulation of intracellular transport" evidence=ISO

GO:0032432 "actin filament bundle" evidence=ISO

GO:0042542 "response to hydrogen peroxide" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=ISO

GO:0043010 "camera-type eye development" evidence=IGI

GO:0043066 "negative regulation of apoptotic process" evidence=ISO;IMP

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IGI

GO:0043292 "contractile fiber" evidence=IDA

GO:0046872 "metal ion binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=ISO

GO:0051260 "protein homooligomerization" evidence=ISO

GO:0051403 "stress-activated MAPK cascade" evidence=ISO

GO:0060561 "apoptotic process involved in morphogenesis" evidence=IGI

GO:2000378 "negative regulation of reactive oxygen species metabolic process" evidence=ISO

RGD|2414 Cryab "crystallin, alpha B" [Rattus norvegicus (taxid:10116)]

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 57/141 (40%), Positives = 80/141 (56%)

Query:    15 FDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRP---WRSLARSNSGVSNIT 71
             F  PSRL DQ FG  L   DL S  +SL+    P    YLRP    R+ +  ++G+S + 
Sbjct:    17 FHSPSRLFDQFFGEHLLESDLFSTATSLS----PF---YLRPPSFLRAPSWIDTGLSEMR 69

Query:    72 NEENKVQVILDVQQFSPNEISIKTVDGFILVXXXXXXXXXXXXFISRQFKRRYLLPKDVE 131
              E+++  V LDV+ FSP E+ +K +   I V            FISR+F R+Y +P DV+
Sbjct:    70 MEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVD 129

Query:   132 IEKVTSSLSSDGVLTITAPKR 152
                +TSSLSSDGVLT+  P++
Sbjct:   130 PLTITSSLSSDGVLTVNGPRK 150

GO:0001666 "response to hypoxia" evidence=IEA;ISO

GO:0002088 "lens development in camera-type eye" evidence=IEA;ISO

GO:0005212 "structural constituent of eye lens" evidence=TAS

GO:0005634 "nucleus" evidence=ISO;ISS

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005829 "cytosol" evidence=IEA;ISO

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0006006 "glucose metabolic process" evidence=IMP

GO:0006457 "protein folding" evidence=IDA

GO:0007021 "tubulin complex assembly" evidence=IEA;ISO

GO:0007517 "muscle organ development" evidence=IEA;ISO

GO:0007568 "aging" evidence=IEP

GO:0008017 "microtubule binding" evidence=IDA

GO:0008092 "cytoskeletal protein binding" evidence=IDA

GO:0009986 "cell surface" evidence=IDA

GO:0010629 "negative regulation of gene expression" evidence=IEA;ISO

GO:0015630 "microtubule cytoskeleton" evidence=IDA

GO:0030018 "Z disc" evidence=IEA;ISO

GO:0030308 "negative regulation of cell growth" evidence=IDA

GO:0031109 "microtubule polymerization or depolymerization" evidence=IMP

GO:0031674 "I band" evidence=IDA

GO:0032355 "response to estradiol stimulus" evidence=IEP

GO:0032387 "negative regulation of intracellular transport" evidence=IEA;ISO

GO:0032432 "actin filament bundle" evidence=IDA

GO:0042542 "response to hydrogen peroxide" evidence=IEP;ISO

GO:0042803 "protein homodimerization activity" evidence=ISO;ISS

GO:0043010 "camera-type eye development" evidence=ISO

GO:0043066 "negative regulation of apoptotic process" evidence=ISO;IDA

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IEA;ISO

GO:0043292 "contractile fiber" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA;ISO

GO:0051260 "protein homooligomerization" evidence=IEA;ISO

GO:0051403 "stress-activated MAPK cascade" evidence=IMP

GO:0060561 "apoptotic process involved in morphogenesis" evidence=IEA;ISO

GO:2000378 "negative regulation of reactive oxygen species metabolic process" evidence=IDA

UNIPROTKB|P05811 CRYAB "Alpha-crystallin B chain" [Mesocricetus auratus (taxid:10036)]

 Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 56/141 (39%), Positives = 80/141 (56%)

Query:    15 FDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRP---WRSLARSNSGVSNIT 71
             F  PSRL DQ FG  L   DL S  +SL+    P    YLRP    R+ +  ++G+S + 
Sbjct:    17 FHSPSRLFDQFFGEHLLESDLFSTATSLS----PF---YLRPPSFLRAPSWIDTGLSEMR 69

Query:    72 NEENKVQVILDVQQFSPNEISIKTVDGFILVXXXXXXXXXXXXFISRQFKRRYLLPKDVE 131
              E+++  V LDV+ FSP E+ +K +   + V            FISR+F R+Y +P DV+
Sbjct:    70 MEKDRFSVNLDVKHFSPEELKVKVLGDVVEVHGKHEERQDEHGFISREFHRKYRIPADVD 129

Query:   132 IEKVTSSLSSDGVLTITAPKR 152
                +TSSLSSDGVLT+  P++
Sbjct:   130 PLTITSSLSSDGVLTVNGPRK 150

GO:0005634 "nucleus" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0042803 "protein homodimerization activity" evidence=ISS

UNIPROTKB|E9PR44 CRYAB "Alpha-crystallin B chain" [Homo sapiens (taxid:9606)]

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 59/144 (40%), Positives = 81/144 (56%)

Query:    15 FDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRP---WRSLARSNSGVSNIT 71
             F  PSRL DQ FG  L   DL    +SL+    P    YLRP    R+ +  ++G+S + 
Sbjct:    17 FHSPSRLFDQFFGEHLLESDLFPTSTSLS----PF---YLRPPSFLRAPSWFDTGLSEMR 69

Query:    72 NEENKVQVILDVQQFSPNEISIKTVDGFILVXXXXXXXXXXXXFISRQFKRRYLLPKDVE 131
              E+++  V LDV+ FSP E+ +K +   I V            FISR+F R+Y +P DV+
Sbjct:    70 LEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVD 129

Query:   132 IEKVTSSLSSDGVLTITAP-KRVS 154
                +TSSLSSDGVLT+  P K+VS
Sbjct:   130 PLTITSSLSSDGVLTVNGPRKQVS 153

GO:0005212 "structural constituent of eye lens" evidence=IEA

GO:0001666 "response to hypoxia" evidence=IEA

GO:0002088 "lens development in camera-type eye" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006006 "glucose metabolic process" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0007021 "tubulin complex assembly" evidence=IEA

GO:0007517 "muscle organ development" evidence=IEA

GO:0007568 "aging" evidence=IEA

GO:0008017 "microtubule binding" evidence=IEA

GO:0009986 "cell surface" evidence=IEA

GO:0010629 "negative regulation of gene expression" evidence=IEA

GO:0015630 "microtubule cytoskeleton" evidence=IEA

GO:0030018 "Z disc" evidence=IEA

GO:0030308 "negative regulation of cell growth" evidence=IEA

GO:0031109 "microtubule polymerization or depolymerization" evidence=IEA

GO:0032355 "response to estradiol stimulus" evidence=IEA

GO:0032432 "actin filament bundle" evidence=IEA

GO:0042542 "response to hydrogen peroxide" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IEA

GO:0051403 "stress-activated MAPK cascade" evidence=IEA

GO:0060561 "apoptotic process involved in morphogenesis" evidence=IEA

GO:2000378 "negative regulation of reactive oxygen species metabolic process" evidence=IEA

UNIPROTKB|P02511 CRYAB "Alpha-crystallin B chain" [Homo sapiens (taxid:9606)]

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 59/144 (40%), Positives = 81/144 (56%)

Query:    15 FDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRP---WRSLARSNSGVSNIT 71
             F  PSRL DQ FG  L   DL    +SL+    P    YLRP    R+ +  ++G+S + 
Sbjct:    17 FHSPSRLFDQFFGEHLLESDLFPTSTSLS----PF---YLRPPSFLRAPSWFDTGLSEMR 69

Query:    72 NEENKVQVILDVQQFSPNEISIKTVDGFILVXXXXXXXXXXXXFISRQFKRRYLLPKDVE 131
              E+++  V LDV+ FSP E+ +K +   I V            FISR+F R+Y +P DV+
Sbjct:    70 LEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVD 129

Query:   132 IEKVTSSLSSDGVLTITAP-KRVS 154
                +TSSLSSDGVLT+  P K+VS
Sbjct:   130 PLTITSSLSSDGVLTVNGPRKQVS 153

GO:0005212 "structural constituent of eye lens" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0001666 "response to hypoxia" evidence=IEA

GO:0002088 "lens development in camera-type eye" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006006 "glucose metabolic process" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0007021 "tubulin complex assembly" evidence=IEA

GO:0007517 "muscle organ development" evidence=IEA

GO:0007568 "aging" evidence=IEA

GO:0008017 "microtubule binding" evidence=IEA

GO:0009986 "cell surface" evidence=IEA

GO:0010629 "negative regulation of gene expression" evidence=IEA

GO:0015630 "microtubule cytoskeleton" evidence=IEA

GO:0030018 "Z disc" evidence=IEA

GO:0030308 "negative regulation of cell growth" evidence=IEA

GO:0031109 "microtubule polymerization or depolymerization" evidence=IEA

GO:0032355 "response to estradiol stimulus" evidence=IEA

GO:0032432 "actin filament bundle" evidence=IEA

GO:0042542 "response to hydrogen peroxide" evidence=IEA

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IEA

GO:0051403 "stress-activated MAPK cascade" evidence=IEA

GO:0060561 "apoptotic process involved in morphogenesis" evidence=IEA

GO:2000378 "negative regulation of reactive oxygen species metabolic process" evidence=IEA

GO:0051260 "protein homooligomerization" evidence=IDA

GO:0051082 "unfolded protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0005515 "protein binding" evidence=IPI

GO:0006936 "muscle contraction" evidence=TAS

GO:0043066 "negative regulation of apoptotic process" evidence=IDA

GO:0032387 "negative regulation of intracellular transport" evidence=IDA

UNIPROTKB|Q5R9K0 CRYAB "Alpha-crystallin B chain" [Pongo abelii (taxid:9601)]

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 59/144 (40%), Positives = 81/144 (56%)

Query:    15 FDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRP---WRSLARSNSGVSNIT 71
             F  PSRL DQ FG  L   DL    +SL+    P    YLRP    R+ +  ++G+S + 
Sbjct:    17 FHSPSRLFDQFFGEHLLESDLFPTSTSLS----PF---YLRPPSFLRAPSWFDTGLSEMR 69

Query:    72 NEENKVQVILDVQQFSPNEISIKTVDGFILVXXXXXXXXXXXXFISRQFKRRYLLPKDVE 131
              E+++  V LDV+ FSP E+ +K +   I V            FISR+F R+Y +P DV+
Sbjct:    70 LEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVD 129

Query:   132 IEKVTSSLSSDGVLTITAP-KRVS 154
                +TSSLSSDGVLT+  P K+VS
Sbjct:   130 PLTITSSLSSDGVLTVNGPRKQVS 153

GO:0005634 "nucleus" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0042803 "protein homodimerization activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5R9K0	CRYAB_PONAB	No assigned EC number	0.4539	0.7797	0.7485	yes	N/A
Q7M2W6	CRYAB_PIG	No assigned EC number	0.4444	0.7976	0.7657	yes	N/A
P02511	CRYAB_HUMAN	No assigned EC number	0.4539	0.7797	0.7485	yes	N/A
P41316	CRYAB_RABIT	No assigned EC number	0.4539	0.7797	0.7485	yes	N/A
P02504	CRYAA_CHICK	No assigned EC number	0.4632	0.7440	0.7225	yes	N/A
P82147	L2EFL_DROME	No assigned EC number	0.6037	0.8869	0.7967	yes	N/A
P23927	CRYAB_MOUSE	No assigned EC number	0.4609	0.7797	0.7485	yes	N/A
P02510	CRYAB_BOVIN	No assigned EC number	0.4444	0.7976	0.7657	yes	N/A
P23928	CRYAB_RAT	No assigned EC number	0.4513	0.7976	0.7657	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	168
cd06526	83	cd06526, metazoan_ACD, Alpha-crystallin domain (AC	1e-41
cd06475	86	cd06475, ACD_HspB1_like, Alpha crystallin domain (	1e-35
cd06478	83	cd06478, ACD_HspB4-5-6, Alpha-crystallin domain fo	6e-31
pfam00011	101	pfam00011, HSP20, Hsp20/alpha crystallin family	5e-28
cd06498	84	cd06498, ACD_alphaB-crystallin_HspB5, Alpha-crysta	2e-27
cd06497	86	cd06497, ACD_alphaA-crystallin_HspB4, Alpha-crysta	4e-27
cd06476	83	cd06476, ACD_HspB2_like, Alpha crystallin domain (	2e-24
cd06464	88	cd06464, ACD_sHsps-like, Alpha-crystallin domain (	2e-23
cd06477	83	cd06477, ACD_HspB3_Like, Alpha crystallin domain (	2e-19
cd06480	91	cd06480, ACD_HspB8_like, Alpha-crystallin domain (	3e-19
cd00298	80	cd00298, ACD_sHsps_p23-like, This domain family in	3e-18
cd06481	87	cd06481, ACD_HspB9_like, Alpha crystallin domain (	5e-13
COG0071	146	COG0071, IbpA, Molecular chaperone (small heat sho	3e-12
cd06479	81	cd06479, ACD_HspB7_like, Alpha crystallin domain (	5e-10
cd06470	90	cd06470, ACD_IbpA-B_like, Alpha-crystallin domain	6e-08
cd06471	93	cd06471, ACD_LpsHSP_like, Group of bacterial prote	2e-06
cd06482	87	cd06482, ACD_HspB10, Alpha crystallin domain (ACD)	3e-05
cd06472	92	cd06472, ACD_ScHsp26_like, Alpha crystallin domain	9e-05

>gnl|CDD|107247 cd06526, metazoan_ACD, Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps)

 Score =  133 bits (338), Expect = 1e-41
 Identities = 48/82 (58%), Positives = 64/82 (78%)

Query: 70  ITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKD 129
           + +++ K QV LDV+ F P E+ +K  D  ++VEGKHEE+EDEHG++SR+F RRY LP+ 
Sbjct: 2   VNDDDEKFQVTLDVKGFKPEELKVKVSDNKLVVEGKHEEREDEHGYVSREFTRRYQLPEG 61

Query: 130 VEIEKVTSSLSSDGVLTITAPK 151
           V+ + VTSSLSSDGVLTI APK
Sbjct: 62  VDPDSVTSSLSSDGVLTIEAPK 83

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. Length = 83

>gnl|CDD|107230 cd06475, ACD_HspB1_like, Alpha crystallin domain (ACD) found in mammalian small (s)heat shock protein (Hsp)-27 (also denoted HspB1 in human) and similar proteins

 Score =  119 bits (299), Expect = 1e-35
 Identities = 45/85 (52%), Positives = 60/85 (70%)

Query: 66  GVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYL 125
           G+S I    ++ +V LDV  F+P E+ +KT DG + + GKHEEK+DEHGF+SR F R+Y 
Sbjct: 1   GMSEIRQTADRWKVSLDVNHFAPEELVVKTKDGVVEITGKHEEKQDEHGFVSRCFTRKYT 60

Query: 126 LPKDVEIEKVTSSLSSDGVLTITAP 150
           LP  V+   VTSSLS DG+LT+ AP
Sbjct: 61  LPPGVDPTAVTSSLSPDGILTVEAP 85

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Hsp27 shows enhanced synthesis in response to stress. It is a molecular chaperone which interacts with a large number of different proteins. It is found in many types of human cells including breast, uterus, cervix, platelets and cancer cells. Hsp27 has diverse cellular functions including, chaperoning, regulation of actin polymerization, keratinocyte differentiation, regulation of inflammatory pathways in keratinocytes, and protection from oxidative stress through modulating glutathione levels. It is also a subunit of AUF1-containing protein complexes. It has been linked to several transduction pathways regulating cellular functions including differentiation, cell growth, development, and apoptosis. Its activity can be regulated by phosphorylation. Its unphosphorylated state is a high molecular weight aggregated form (100-800kDa) composed of up to 24 subunits, which forms as a result of multiple interactions within the ACD, and is required for chaperone function and resistance to oxidative stress. Upon phosphorylation these large aggregates rapidly disassociate to smaller oligomers and chaperone activity is modified. High constitutive levels of Hsp27 have been detected in various cancer cells, in particular those of carcinoma origin. Over-expression of Hsp27 has a protective effect against various diseases-processes, including Huntington's disease. Mutations in Hsp27 have been associated with a form of distal hereditary motor neuropathy type II and Charcot-Marie-Tooth disease type 2. Length = 86

>gnl|CDD|107233 cd06478, ACD_HspB4-5-6, Alpha-crystallin domain found in alphaA-crystallin (HspB4), alphaB-crystallin (HspB5), and the small heat shock protein (sHsp) HspB6, also known as Hsp20

 Score =  106 bits (267), Expect = 6e-31
 Identities = 43/79 (54%), Positives = 61/79 (77%)

Query: 73  EENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEI 132
           ++++  V LDV+ FSP E+S+K +  F+ + GKHEE++DEHGFISR+F RRY LP  V+ 
Sbjct: 5   DKDRFSVNLDVKHFSPEELSVKVLGDFVEIHGKHEERQDEHGFISREFHRRYRLPPGVDP 64

Query: 133 EKVTSSLSSDGVLTITAPK 151
             +TSSLS+DGVLTI+ P+
Sbjct: 65  AAITSSLSADGVLTISGPR 83

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 on the other hand is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. HspB5's functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its oligomerization and anti-apoptotic activities. HspB5 is protective in demyelinating disease such as multiple sclerosis (MS), being a negative regulator of inflammation. In early active MS lesions it is the most abundant gene transcript and an autoantigen, the immune response against it would disrupt its function and worsen inflammation and demyelination. Given as therapy for ongoing demyelinating disease it may counteract this effect. It is an autoantigen in the pathogenesis of various other inflammatory disorders including Lens-associated uveitis (LAU), and Behcet's disease. Mutations in HspB5 have been associated with diseases including dominant cataract and desmin-related myopathy. Mutations in HspB4 have been associated with Autosomal Dominant Congenital Cataract (ADCC). HspB6 (Hsp20) is ubiquitous and is involved in diverse functions including regulation of glucose transport and contraction of smooth muscle, in platelet aggregation, in cardioprotection, and in the prevention of apoptosis. It interacts with the universal scaffolding and adaptor protein 14-3-3, and also with the proapoptotic protein Bax. Length = 83

>gnl|CDD|215655 pfam00011, HSP20, Hsp20/alpha crystallin family

 Score = 99.6 bits (249), Expect = 5e-28
 Identities = 39/89 (43%), Positives = 57/89 (64%), Gaps = 6/89 (6%)

Query: 70  ITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHE-EKEDEHGFIS----RQFKRRY 124
           I  +++   V LDV  F P E+ +K  D  +LV+GKHE E+ED+HG  S    R F R++
Sbjct: 2   IKEDKDAFVVKLDVPGFKPEELKVKVEDNRVLVKGKHEKEEEDDHGLRSERSYRSFSRKF 61

Query: 125 LLPKDVEIEKVTSSLSSDGVLTITAPKRV 153
           +LP++ + +KV +SL  DGVLT+T PK  
Sbjct: 62  VLPENADPDKVKASL-KDGVLTVTVPKLE 89

Length = 101

>gnl|CDD|107246 cd06498, ACD_alphaB-crystallin_HspB5, Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaB-crystallin (HspB5, 20kDa)

 Score = 97.8 bits (243), Expect = 2e-27
 Identities = 43/80 (53%), Positives = 61/80 (76%)

Query: 73  EENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEI 132
           E++K  V LDV+ FSP E+ +K +  FI + GKHEE++DEHGFISR+F+R+Y +P DV+ 
Sbjct: 5   EKDKFSVNLDVKHFSPEELKVKVLGDFIEIHGKHEERQDEHGFISREFQRKYRIPADVDP 64

Query: 133 EKVTSSLSSDGVLTITAPKR 152
             +TSSLS DGVLT+  P++
Sbjct: 65  LTITSSLSPDGVLTVCGPRK 84

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. HspB4 does not belong to this group. HspB5 shows increased synthesis in response to stress. HspB5 is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. Its functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its oligomerization and anti-apoptotic activities. HspB5 is protective in demyelinating disease such as multiple sclerosis (MS), being a negative regulator of inflammation. In early active MS lesions it is the most abundant gene transcript and an autoantigen, the immune response against it would disrupt its function and worsen inflammation and demyelination. Given as therapy for ongoing demyelinating disease it may counteract this effect. It is an autoantigen in the pathogenesis of various other inflammatory disorders including Lens-associated uveitis (LAU), and Behcet's disease. Mutations in HspB5 have been associated with diseases including dominant cataract and desmin-related myopathy. Length = 84

>gnl|CDD|107245 cd06497, ACD_alphaA-crystallin_HspB4, Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaA-crystallin (HspB4, 20kDa)

 Score = 97.4 bits (242), Expect = 4e-27
 Identities = 38/86 (44%), Positives = 64/86 (74%)

Query: 66  GVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYL 125
           G+S + ++ +K  + LDV+ FSP ++++K +D ++ + GKH E++D+HG+ISR+F RRY 
Sbjct: 1   GISEVRSDRDKFTIYLDVKHFSPEDLTVKVLDDYVEIHGKHSERQDDHGYISREFHRRYR 60

Query: 126 LPKDVEIEKVTSSLSSDGVLTITAPK 151
           LP +V+   +T SLS+DG+LT + PK
Sbjct: 61  LPSNVDQSAITCSLSADGMLTFSGPK 86

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 does not belong to this group. Mutations inHspB4 have been associated with Autosomal Dominant Congenital Cataract (ADCC). The chaperone-like functions of HspB4 are considered important for maintaining lens transparency and preventing cataract. Length = 86

>gnl|CDD|107231 cd06476, ACD_HspB2_like, Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB2/heat shock 27kDa protein 2 and similar proteins

 Score = 90.4 bits (224), Expect = 2e-24
 Identities = 39/80 (48%), Positives = 58/80 (72%)

Query: 72  NEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVE 131
           +E++K QV LDV  F+P+EI+++TVD  + V  +H ++ D HGF+SR+F R Y+LP DV+
Sbjct: 4   SEDDKYQVFLDVCHFTPDEITVRTVDNLLEVSARHPQRMDRHGFVSREFTRTYILPMDVD 63

Query: 132 IEKVTSSLSSDGVLTITAPK 151
              V +SLS DG+L I AP+
Sbjct: 64  PLLVRASLSHDGILCIQAPR 83

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB2 is preferentially and constitutively expressed in skeletal muscle and heart. HspB2 shows homooligomeric activity and forms aggregates in muscle cytosol. Although its expression is not induced by heat shock, it redistributes to the insoluble fraction in response to heat shock. In the mouse heart, HspB2 plays a role in maintaining energetic balance, by protecting cardiac energetics during ischemia/reperfusion, and allowing for increased work during acute inotropic challenge. hHspB2 [previously also known as myotonic dystrophy protein kinase (DMPK) binding protein (MKBP)] is selectively up-regulated in skeletal muscles from myotonic dystrophy patients. The ACD of hHspB2 binds the DMPK kinase domain. In vitro, hHspB2 enhances the kinase activity of DMPK and confers thermoresistance. The hHspB2 gene lies less than 1kb from the 5 prime end of the related alphaB (HspB4)-crystallin gene, with the opposite transcription direction. These two genes may share regulatory elements for their expression. Length = 83

>gnl|CDD|107221 cd06464, ACD_sHsps-like, Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps)

 Score = 87.6 bits (218), Expect = 2e-23
 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 7/89 (7%)

Query: 69  NITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDE------HGFISRQFKR 122
           ++   ++   V  D+  F   +I ++  DG + + G+ EE+E+E             F R
Sbjct: 1   DVYETDDAYVVEADLPGFKKEDIKVEVEDGVLTISGEREEEEEEEENYLRRERSYGSFSR 60

Query: 123 RYLLPKDVEIEKVTSSLSSDGVLTITAPK 151
            + LP+DV+ +K+ +SL  +GVLTIT PK
Sbjct: 61  SFRLPEDVDPDKIKASL-ENGVLTITLPK 88

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. Length = 88

>gnl|CDD|107232 cd06477, ACD_HspB3_Like, Alpha crystallin domain (ACD) found in mammalian HspB3, also known as heat-shock protein 27-like protein (HSPL27, 17-kDa) and similar proteins

 Score = 77.2 bits (190), Expect = 2e-19
 Identities = 32/75 (42%), Positives = 51/75 (68%)

Query: 73  EENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEI 132
            +   Q++LDV QF P +I I+  +G++L++G+H  + DEHGFISR F R+Y LP  VE 
Sbjct: 5   GKPMFQILLDVVQFRPEDIIIQVFEGWLLIKGQHGVRMDEHGFISRSFTRQYQLPDGVEH 64

Query: 133 EKVTSSLSSDGVLTI 147
           + +++ L  DG+L +
Sbjct: 65  KDLSAMLCHDGILVV 79

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB3 is expressed in adult skeletal muscle, smooth muscle, and heart, and in several other fetal tissues. In muscle cells HspB3 forms an oligomeric 150 kDa complex with myotonic dystrophy protein kinase-binding protein (MKBP/ HspB2), this complex may comprise one of two independent muscle-cell specific chaperone systems. The expression of HspB3 is induced during muscle differentiation controlled by the myogenic factor MyoD. HspB3 may also interact with Hsp22 (HspB8). Length = 83

>gnl|CDD|107235 cd06480, ACD_HspB8_like, Alpha-crystallin domain (ACD) found in mammalian 21

 Score = 77.3 bits (190), Expect = 3e-19
 Identities = 32/74 (43%), Positives = 51/74 (68%)

Query: 78  QVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTS 137
           +V ++V  F P E+++KT DGF+ V GKHEE++ E G +S+ F ++  LP +V+   V +
Sbjct: 18  KVCVNVHSFKPEELTVKTKDGFVEVSGKHEEQQKEGGIVSKNFTKKIQLPPEVDPVTVFA 77

Query: 138 SLSSDGVLTITAPK 151
           SLS +G+L I AP+
Sbjct: 78  SLSPEGLLIIEAPQ 91

6 KDa small heat shock protein (sHsp) HspB8, also denoted as Hsp22 in humans, and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. A chaperone complex formed of HspB8 and Bag3 stimulates degradation of protein complexes by macroautophagy. HspB8 also forms complexes with Hsp27 (HspB1), MKBP (HspB2), HspB3, alphaB-crystallin (HspB5), Hsp20 (HspB6), and cvHsp (HspB7). These latter interactions may depend on phosphorylation of the respective partner sHsp. HspB8 may participate in the regulation of cell proliferation, cardiac hypertrophy, apoptosis, and carcinogenesis. Point mutations in HspB8 have been correlated with the development of several congenital neurological diseases, including Charcot Marie tooth disease and distal motor neuropathy type II. Length = 91

>gnl|CDD|107219 cd00298, ACD_sHsps_p23-like, This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat shock proteins (sHsps) and a similar domain found in p23-like proteins

 Score = 74.2 bits (183), Expect = 3e-18
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 2/82 (2%)

Query: 70  ITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKD 129
               +++V V +D+      +I ++  D  + + GK EE E+E      +F+R + LP+D
Sbjct: 1   WYQTDDEVVVTVDLPGVKKEDIKVEVEDNVLTISGKREE-EEERERSYGEFERSFELPED 59

Query: 130 VEIEKVTSSLSSDGVLTITAPK 151
           V+ EK  +SL  +GVL IT PK
Sbjct: 60  VDPEKSKASL-ENGVLEITLPK 80

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is this ACD. sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. p23 is a cochaperone of the Hsp90 chaperoning pathway. It binds Hsp90 and participates in the folding of a number of Hsp90 clients including the progesterone receptor. p23 also has a passive chaperoning activity. p23 in addition may act as the cytosolic prostaglandin E2 synthase. Included in this family is the p23-like C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1) and the p23-like domains of human butyrate-induced transcript 1 (hB-ind1), NUD (nuclear distribution) C, Melusin, and NAD(P)H cytochrome b5 (NCB5) oxidoreductase (OR). Length = 80

>gnl|CDD|107236 cd06481, ACD_HspB9_like, Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB9 and similar proteins

 Score = 60.9 bits (148), Expect = 5e-13
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 73  EENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEK-EDEHGFIS---RQFKRRYLLPK 128
            +    + LDV+ FSP ++S++     ++V GK E+K EDE G  S   ++F R   LP+
Sbjct: 5   GKEGFSLKLDVRGFSPEDLSVRVDGRKLVVTGKREKKNEDEKGSFSYEYQEFVREAQLPE 64

Query: 129 DVEIEKVTSSLSSDGVLTITAP 150
            V+ E VT SLS  G L I AP
Sbjct: 65  HVDPEAVTCSLSPSGHLHIRAP 86

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB9 is expressed exclusively in the normal testis and in various tumor samples and is a cancer/testis antigen. hHspB9 interacts with TCTEL1 (T-complex testis expressed protein -1), a subunit of dynein. hHspB9 and TCTEL1 are co-expressed in similar cells within the testis and in tumor cells. Included in this group is Xenopus Hsp30, a developmentally-regulated heat-inducible molecular chaperone. Length = 87

>gnl|CDD|223149 COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]

 Score = 60.5 bits (147), Expect = 3e-12
 Identities = 23/113 (20%), Positives = 50/113 (44%), Gaps = 11/113 (9%)

Query: 54  LRPWRSLARSNSGVS---NITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKE 110
            R + +L  S    +   +I   +++ ++  ++      +I I      + + G+ EE+E
Sbjct: 26  FREFGNLPESRPTGTPPVDIEETDDEYRITAELPGVDKEDIEITVEGNTLTIRGEREEEE 85

Query: 111 DEH-------GFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRVSTR 156
           +E             +F+R + LP+ V+ E + +    +G+LT+T PK     
Sbjct: 86  EEEEEGYLRRERAYGEFERTFRLPEKVDPEVIKAKY-KNGLLTVTLPKAEPEE 137

Length = 146

>gnl|CDD|107234 cd06479, ACD_HspB7_like, Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB7, also known as cardiovascular small heat shock protein (cvHsp), and similar proteins

 Score = 53.0 bits (127), Expect = 5e-10
 Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 3/81 (3%)

Query: 69  NITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPK 128
           N+    +  Q  +DV  FSP +I + T +  I V   H EK    G +   F  +  LP+
Sbjct: 2   NVKTLGDTYQFAVDVSDFSPEDIIVTTSNNQIEV---HAEKLASDGTVMNTFTHKCQLPE 58

Query: 129 DVEIEKVTSSLSSDGVLTITA 149
           DV+   V+SSL  DG LTI A
Sbjct: 59  DVDPTSVSSSLGEDGTLTIKA 79

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB7 is a 25-kDa protein, preferentially expressed in heart and skeletal muscle. It binds the cytoskeleton protein alpha-filamin (also known as actin-binding protein 280). The expression of HspB7 is increased during rat muscle aging. Its expression is also modulated in obesity implicating this protein in this and related metabolic disorders. As the human gene encoding HspB7 is mapped to chromosome 1p36.23-p34.3 it is a positional candidate for several dystrophies and myopathies. Length = 81

>gnl|CDD|107227 cd06470, ACD_IbpA-B_like, Alpha-crystallin domain (ACD) found in Escherichia coli inclusion body-associated proteins IbpA and IbpB, and similar proteins

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 9/80 (11%)

Query: 74  ENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDE-----H-GFISRQFKRRYLLP 127
           EN  ++ L V  FS +++ I+  +  + V GK  ++E+E     H G   R F+R + L 
Sbjct: 10  ENNYRITLAVAGFSEDDLEIEVENNQLTVTGKKADEENEEREYLHRGIAKRAFERSFNLA 69

Query: 128 KDVEIEKVTSSLSSDGVLTI 147
             V+++        +G+LTI
Sbjct: 70  DHVKVKGAE---LENGLLTI 86

IbpA and IbpB are 16 kDa small heat shock proteins (sHsps). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. IbpA and IbpB are produced during high-level production of various heterologous proteins, specifically human prorenin, renin and bovine insulin-like growth factor 2 (bIGF-2), and are strongly associated with inclusion bodies containing these heterologous proteins. IbpA and IbpB work as an integrated system to stabilize thermally aggregated proteins in a disaggregation competent state. The chaperone activity of IbpB is also significantly elevated as the temperature increases from normal to heat shock. The high temperature results in the disassociation of 2-3-MDa IbpB oligomers into smaller approximately 600-kDa structures. This elevated activity seen under heat shock conditions is retained for an extended period of time after the temperature is returned to normal. IbpA also forms multimers. Length = 90

>gnl|CDD|107228 cd06471, ACD_LpsHSP_like, Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18

 Score = 43.6 bits (104), Expect = 2e-06
 Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 11/91 (12%)

Query: 70  ITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDE----HGFISR-----QF 120
           I   +++  V  D+  F   +I +   DG++ +  K +E +DE      +I R      F
Sbjct: 5   IKETDDEYIVEADLPGFKKEDIKLDYKDGYLTISAKRDESKDEKDKKGNYIRRERYYGSF 64

Query: 121 KRRYLLPKDVEIEKVTSSLSSDGVLTITAPK 151
            R + LP +V+ E++ +    +GVL IT PK
Sbjct: 65  SRSFYLP-NVDEEEIKAKY-ENGVLKITLPK 93

5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic membrane. Length = 93

>gnl|CDD|107237 cd06482, ACD_HspB10, Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB10, also known as sperm outer dense fiber protein (ODFP), and similar proteins

 Score = 40.6 bits (95), Expect = 3e-05
 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 3/79 (3%)

Query: 75  NKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFK---RRYLLPKDVE 131
           + V   +DV  F P+++ +K  DG + V  + E + D  G     +    + + LP  V+
Sbjct: 8   SNVLASVDVCGFEPDQVKVKVKDGKVQVSAERENRYDCLGSKKYSYMNICKEFSLPPGVD 67

Query: 132 IEKVTSSLSSDGVLTITAP 150
            + VT S     V+ I  P
Sbjct: 68  EKDVTYSYGLGSVVKIETP 86

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB10 occurs exclusively in the axoneme of sperm cells and may have a cytoskeletal role. Length = 87

>gnl|CDD|107229 cd06472, ACD_ScHsp26_like, Alpha crystallin domain (ACD) found in Saccharomyces cerevisiae (Sc) small heat shock protein (Hsp)26 and similar proteins

 Score = 39.2 bits (92), Expect = 9e-05
 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 19/83 (22%)

Query: 82  DVQQFSPNEISIKTVDGFILV---EGKHEEKED----------EHGFISRQFKRRYLLPK 128
           DV      ++ ++  DG +L    E K EE++              F+     RR+ LP+
Sbjct: 16  DVPGVKKEDVKVEVEDGRVLRISGERKKEEEKKGDDWHRVERSSGRFV-----RRFRLPE 70

Query: 129 DVEIEKVTSSLSSDGVLTITAPK 151
           + + ++V + L  +GVLT+T PK
Sbjct: 71  NADADEVKAFLE-NGVLTVTVPK 92

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. ScHsp26 is temperature-regulated, it switches from an inactive to a chaperone-active form upon elevation in temperature. It associates into large 24-mers storage forms which upon heat shock disassociate into dimers. These dimers initiate the interaction with non-native substrate proteins and re-assemble into large globular assemblies having one monomer of substrate bound per dimer. This group also contains Arabidopsis thaliana (Ath) Hsp15.7, a peroxisomal matrix protein which can complement the morphological phenotype of S. cerevisiae mutants deficient in Hsps26. AthHsp15.7 is minimally expressed under normal conditions and is strongly induced by heat and oxidative stress. Also belonging to this group is wheat HSP16.9 which differs in quaternary structure from the shell-type particles of ScHsp26, it assembles as a dodecameric double disc, with each disc organized as a trimer of dimers. Length = 92

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	168
PRK11597	142	heat shock chaperone IbpB; Provisional	99.94
PRK10743	137	heat shock protein IbpA; Provisional	99.94
cd06497	86	ACD_alphaA-crystallin_HspB4 Alpha-crystallin domai	99.94
cd06498	84	ACD_alphaB-crystallin_HspB5 Alpha-crystallin domai	99.93
cd06478	83	ACD_HspB4-5-6 Alpha-crystallin domain found in alp	99.93
COG0071	146	IbpA Molecular chaperone (small heat shock protein	99.93
cd06476	83	ACD_HspB2_like Alpha crystallin domain (ACD) found	99.93
cd06475	86	ACD_HspB1_like Alpha crystallin domain (ACD) found	99.92
KOG3591|consensus	173		99.92
cd06477	83	ACD_HspB3_Like Alpha crystallin domain (ACD) found	99.91
cd06479	81	ACD_HspB7_like Alpha crystallin domain (ACD) found	99.91
PF00011	102	HSP20: Hsp20/alpha crystallin family This prints e	99.91
cd06480	91	ACD_HspB8_like Alpha-crystallin domain (ACD) found	99.89
cd06472	92	ACD_ScHsp26_like Alpha crystallin domain (ACD) fou	99.89
cd06481	87	ACD_HspB9_like Alpha crystallin domain (ACD) found	99.88
cd06526	83	metazoan_ACD Alpha-crystallin domain (ACD) of meta	99.88
cd06471	93	ACD_LpsHSP_like Group of bacterial proteins contai	99.88
cd06482	87	ACD_HspB10 Alpha crystallin domain (ACD) found in	99.87
cd06470	90	ACD_IbpA-B_like Alpha-crystallin domain (ACD) foun	99.86
cd06464	88	ACD_sHsps-like Alpha-crystallin domain (ACD) of al	99.82
KOG0710|consensus	196		99.61
cd00298	80	ACD_sHsps_p23-like This domain family includes the	99.6
cd06469	78	p23_DYX1C1_like p23_like domain found in proteins	99.34
PF05455	177	GvpH: GvpH; InterPro: IPR008633 This family consis	99.08
cd06463	84	p23_like Proteins containing this p23_like domain	99.05
cd06466	84	p23_CS_SGT1_like p23_like domain similar to the C-	98.8
PF04969	79	CS: CS domain; InterPro: IPR017447 The function of	98.38
cd06465	108	p23_hB-ind1_like p23_like domain found in human (h	98.18
cd06489	84	p23_CS_hSgt1_like p23_like domain similar to the C	98.13
PF08190	328	PIH1: pre-RNA processing PIH1/Nop17	97.97
cd06488	87	p23_melusin_like p23_like domain similar to the C-	97.8
cd06467	85	p23_NUDC_like p23_like domain of NUD (nuclear dist	97.77
cd06468	92	p23_CacyBP p23_like domain found in proteins simil	97.76
cd00237	106	p23 p23 binds heat shock protein (Hsp)90 and parti	97.7
cd06493	85	p23_NUDCD1_like p23_NUDCD1: p23-like NUD (nuclear	97.6
cd06494	93	p23_NUDCD2_like p23-like NUD (nuclear distribution	96.91
PLN03088	356	SGT1, suppressor of G2 allele of SKP1; Provisional	96.66
PF00525	59	Crystallin: Alpha crystallin A chain, N terminal;	96.64
cd06490	87	p23_NCB5OR p23_like domain found in NAD(P)H cytoch	96.52
KOG1309|consensus	196		95.5
cd06492	87	p23_mNUDC_like p23-like NUD (nuclear distribution)	95.2
cd06495	102	p23_NUDCD3_like p23-like NUD (nuclear distribution	93.41
KOG3158|consensus	180		87.53
KOG1667|consensus	320		85.11
PF14913	194	DPCD: DPCD protein family	83.73
PF13349	166	DUF4097: Domain of unknown function (DUF4097)	82.64

>PRK11597 heat shock chaperone IbpB; Provisional

Probab=99.94  E-value=2.4e-26  Score=171.95  Aligned_cols=95  Identities=18%  Similarity=0.350  Sum_probs=81.8

Q ss_pred             cceeeEe-CCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEE-----EEEEEEEECCcCcccCCcEEEe
Q psy14967         66 GVSNITN-EENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFIS-----RQFKRRYLLPKDVEIEKVTSSL  139 (168)
Q Consensus        66 p~~di~e-~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~-----r~F~r~~~LP~~vd~~~i~A~~  139 (168)
                      |++||++ ++++|.|+++|||++++||+|++++|.|+|+|+++..+++..|++     ++|+|+|.||++||.+  +|+|
T Consensus        33 P~vdI~e~~~~~y~v~adlPGv~kedi~V~v~~~~LtI~ge~~~~~~~~~~~~~Er~~g~F~R~f~LP~~vd~~--~A~~  110 (142)
T PRK11597         33 PPYNIEKSDDNHYRITLALAGFRQEDLDIQLEGTRLTVKGTPEQPEKEVKWLHQGLVNQPFSLSFTLAENMEVS--GATF  110 (142)
T ss_pred             CcEEEEEcCCCEEEEEEEeCCCCHHHeEEEEECCEEEEEEEEccccCCCcEEEEEEeCcEEEEEEECCCCcccC--cCEE
Confidence            6799998 578999999999999999999999999999998765444444543     5799999999999998  7999


Q ss_pred             CCCCEEEEEEcCc--CCCCCeeeEEE
Q psy14967        140 SSDGVLTITAPKR--VSTRFYFFSLK  163 (168)
Q Consensus       140 ~~~GiL~I~~PK~--~~~~~~~i~i~  163 (168)
                       +||||+|++||.  +..++++|+|+
T Consensus       111 -~nGVL~I~lPK~~~~~~~~rkI~I~  135 (142)
T PRK11597        111 -VNGLLHIDLIRNEPEAIAPQRIAIS  135 (142)
T ss_pred             -cCCEEEEEEeccCccccCCcEEEEC
Confidence             699999999997  55678888875

>PRK10743 heat shock protein IbpA; Provisional

Probab=99.94  E-value=2.9e-26  Score=170.73  Aligned_cols=95  Identities=21%  Similarity=0.486  Sum_probs=81.5

Q ss_pred             cceeeE-eCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceE-----EEEEEEEEECCcCcccCCcEEEe
Q psy14967         66 GVSNIT-NEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFI-----SRQFKRRYLLPKDVEIEKVTSSL  139 (168)
Q Consensus        66 p~~di~-e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~-----~r~F~r~~~LP~~vd~~~i~A~~  139 (168)
                      |++||. +++++|.|+++|||++++||+|++++|.|+|+|+++...++.+|.     .++|+|+|.||++||.+  +|+|
T Consensus        35 p~~di~ee~~~~~~v~aelPGv~kedi~V~v~~~~LtI~ge~~~~~~~~~~~~~Er~~g~F~R~~~LP~~Vd~~--~A~~  112 (137)
T PRK10743         35 PPYNVELVDENHYRIAIAVAGFAESELEITAQDNLLVVKGAHADEQKERTYLYQGIAERNFERKFQLAENIHVR--GANL  112 (137)
T ss_pred             CcEEEEEcCCCEEEEEEECCCCCHHHeEEEEECCEEEEEEEECccccCCcEEEEEEECCEEEEEEECCCCcccC--cCEE
Confidence            568999 489999999999999999999999999999999976654444454     35899999999999999  4999


Q ss_pred             CCCCEEEEEEcCc--CCCCCeeeEEE
Q psy14967        140 SSDGVLTITAPKR--VSTRFYFFSLK  163 (168)
Q Consensus       140 ~~~GiL~I~~PK~--~~~~~~~i~i~  163 (168)
                       +||||+|++||.  +..++++|+|+
T Consensus       113 -~dGVL~I~lPK~~~~~~~~r~I~I~  137 (137)
T PRK10743        113 -VNGLLYIDLERVIPEAKKPRRIEIN  137 (137)
T ss_pred             -eCCEEEEEEeCCCccccCCeEEeeC
Confidence             699999999997  45677787774

>cd06497 ACD_alphaA-crystallin_HspB4 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaA-crystallin (HspB4, 20kDa)

Probab=99.94  E-value=3.1e-26  Score=158.02  Aligned_cols=84  Identities=44%  Similarity=0.911  Sum_probs=78.6

Q ss_pred             eeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEEE
Q psy14967         68 SNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTI  147 (168)
Q Consensus        68 ~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I  147 (168)
                      .+|++++++|.|.++||||+++||+|++.++.|+|+|++++.+++.+|..++|+|+|.||++||+++|+|+|++||+|+|
T Consensus         3 ~~v~e~~~~~~v~~dlpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~Vd~~~i~A~~~~dGvL~I   82 (86)
T cd06497           3 SEVRSDRDKFTIYLDVKHFSPEDLTVKVLDDYVEIHGKHSERQDDHGYISREFHRRYRLPSNVDQSAITCSLSADGMLTF   82 (86)
T ss_pred             ceEEEcCCEEEEEEECCCCCHHHeEEEEECCEEEEEEEEcceeCCCCEEEEEEEEEEECCCCCChHHeEEEeCCCCEEEE
Confidence            48999999999999999999999999999999999999876666678999999999999999999999999955999999


Q ss_pred             EEcC
Q psy14967        148 TAPK  151 (168)
Q Consensus       148 ~~PK  151 (168)
                      ++||
T Consensus        83 ~~PK   86 (86)
T cd06497          83 SGPK   86 (86)
T ss_pred             EecC
Confidence            9998

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 does not belong to this group. Mutations inHspB4 have been associated with Autosomal Dominant Congenital Cataract (ADCC). The chaperone-like functions of HspB4 are considered important for maintaining lens transparency and preventing cataract.

>cd06498 ACD_alphaB-crystallin_HspB5 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaB-crystallin (HspB5, 20kDa)

Probab=99.93  E-value=8.6e-26  Score=155.18  Aligned_cols=83  Identities=52%  Similarity=0.916  Sum_probs=77.2

Q ss_pred             eEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEEEEE
Q psy14967         70 ITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITA  149 (168)
Q Consensus        70 i~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~~  149 (168)
                      +.+++++|.|.++||||+|+||+|++.+|.|+|+|+++.+.++.+|.+++|+|+|.||.+||+++|+|+|++||+|+|++
T Consensus         2 ~~~~~~~~~v~~dlpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~~~dGvL~I~l   81 (84)
T cd06498           2 MRLEKDKFSVNLDVKHFSPEELKVKVLGDFIEIHGKHEERQDEHGFISREFQRKYRIPADVDPLTITSSLSPDGVLTVCG   81 (84)
T ss_pred             eEeCCceEEEEEECCCCCHHHeEEEEECCEEEEEEEEcceeCCCCEEEEEEEEEEECCCCCChHHcEEEeCCCCEEEEEE
Confidence            67889999999999999999999999999999999987666667899999999999999999999999994499999999


Q ss_pred             cCc
Q psy14967        150 PKR  152 (168)
Q Consensus       150 PK~  152 (168)
                      ||+
T Consensus        82 Pk~   84 (84)
T cd06498          82 PRK   84 (84)
T ss_pred             eCC
Confidence            985

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. HspB4 does not belong to this group. HspB5 shows increased synthesis in response to stress. HspB5 is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. Its functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its oligomerization and anti-apoptotic activ

>cd06478 ACD_HspB4-5-6 Alpha-crystallin domain found in alphaA-crystallin (HspB4), alphaB-crystallin (HspB5), and the small heat shock protein (sHsp) HspB6, also known as Hsp20

Probab=99.93  E-value=1.1e-25  Score=154.35  Aligned_cols=83  Identities=52%  Similarity=0.924  Sum_probs=77.0

Q ss_pred             eeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEEEE
Q psy14967         69 NITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTIT  148 (168)
Q Consensus        69 di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~  148 (168)
                      +|.+++++|.|.++||||+++||+|++.++.|+|+|+++...++.+|..++|+|+|.||.+||+++|+|+|++||+|+|+
T Consensus         1 ~~~~~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~dGvL~I~   80 (83)
T cd06478           1 EVRLDKDRFSVNLDVKHFSPEELSVKVLGDFVEIHGKHEERQDEHGFISREFHRRYRLPPGVDPAAITSSLSADGVLTIS   80 (83)
T ss_pred             CeeecCceEEEEEECCCCCHHHeEEEEECCEEEEEEEEceEcCCCCEEEEEEEEEEECCCCcChHHeEEEECCCCEEEEE
Confidence            47899999999999999999999999999999999998765566779999999999999999999999999559999999


Q ss_pred             EcC
Q psy14967        149 APK  151 (168)
Q Consensus       149 ~PK  151 (168)
                      +||
T Consensus        81 ~PK   83 (83)
T cd06478          81 GPR   83 (83)
T ss_pred             ecC
Confidence            997

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 on the other hand is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. HspB5's functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its ol

>COG0071 IbpA Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]

Probab=99.93  E-value=6.9e-25  Score=164.90  Aligned_cols=97  Identities=22%  Similarity=0.454  Sum_probs=85.0

Q ss_pred             CcceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecc--cCCCce-----EEEEEEEEEECCcCcccCCcEE
Q psy14967         65 SGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEK--EDEHGF-----ISRQFKRRYLLPKDVEIEKVTS  137 (168)
Q Consensus        65 ~p~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~--~~~~~~-----~~r~F~r~~~LP~~vd~~~i~A  137 (168)
                      .|++||++++++|.|.++||||+++||+|+++++.|+|+|+++..  .++.++     ..++|+|+|.||+.||++.++|
T Consensus        40 ~P~vdi~e~~~~~~I~~elPG~~kedI~I~~~~~~l~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~Lp~~v~~~~~~A  119 (146)
T COG0071          40 TPPVDIEETDDEYRITAELPGVDKEDIEITVEGNTLTIRGEREEEEEEEEEGYLRRERAYGEFERTFRLPEKVDPEVIKA  119 (146)
T ss_pred             CCcEEEEEcCCEEEEEEEcCCCChHHeEEEEECCEEEEEEEecccccccCCceEEEEEEeeeEEEEEECcccccccceee
Confidence            478999999999999999999999999999999999999998652  234444     3568999999999999999999


Q ss_pred             EeCCCCEEEEEEcCcCCC--CCeeeEE
Q psy14967        138 SLSSDGVLTITAPKRVST--RFYFFSL  162 (168)
Q Consensus       138 ~~~~~GiL~I~~PK~~~~--~~~~i~i  162 (168)
                      +| +||+|+|++||.+++  ++++|.|
T Consensus       120 ~~-~nGvL~I~lpk~~~~~~~~~~i~I  145 (146)
T COG0071         120 KY-KNGLLTVTLPKAEPEEKKPKRIEI  145 (146)
T ss_pred             Ee-eCcEEEEEEeccccccccCceeec
Confidence            99 699999999999988  4555554

>cd06476 ACD_HspB2_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB2/heat shock 27kDa protein 2 and similar proteins

Probab=99.93  E-value=4.9e-25  Score=151.09  Aligned_cols=82  Identities=48%  Similarity=0.864  Sum_probs=75.7

Q ss_pred             eEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEEEEE
Q psy14967         70 ITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITA  149 (168)
Q Consensus        70 i~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~~  149 (168)
                      +..++++|.|.++||||+|+||+|++.+|.|+|+|+++.+.++.++..++|+|+|.||.+||+++|+|+|+.||+|+|++
T Consensus         2 ~~~~~d~y~v~~dlpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~v~A~~~~dGvL~I~~   81 (83)
T cd06476           2 VESEDDKYQVFLDVCHFTPDEITVRTVDNLLEVSARHPQRMDRHGFVSREFTRTYILPMDVDPLLVRASLSHDGILCIQA   81 (83)
T ss_pred             eeccCCeEEEEEEcCCCCHHHeEEEEECCEEEEEEEEcceecCCCEEEEEEEEEEECCCCCChhhEEEEecCCCEEEEEe
Confidence            45678999999999999999999999999999999987666667799999999999999999999999994499999999


Q ss_pred             cC
Q psy14967        150 PK  151 (168)
Q Consensus       150 PK  151 (168)
                      ||
T Consensus        82 Pr   83 (83)
T cd06476          82 PR   83 (83)
T ss_pred             cC
Confidence            97

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB2 is preferentially and constitutively expressed in skeletal muscle and heart. HspB2 shows homooligomeric activity and forms aggregates in muscle cytosol. Although its expression is not induced by heat shock, it redistributes to the insoluble fraction in response to heat shock. In the mouse heart, HspB2 plays a role in maintaining energetic balance, by protecting cardiac energetics during ischemia/reperfusion, and allowing for increased work during acute inotropic challenge. hHspB2 [previously also known as myotonic dystrophy protein kinase (DMPK) binding protein (MKBP)] is selectively up-regulated in skeletal muscles from myotonic dystrophy patients.

>cd06475 ACD_HspB1_like Alpha crystallin domain (ACD) found in mammalian small (s)heat shock protein (Hsp)-27 (also denoted HspB1 in human) and similar proteins

Probab=99.92  E-value=1.8e-24  Score=149.18  Aligned_cols=83  Identities=53%  Similarity=0.883  Sum_probs=77.8

Q ss_pred             eeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEEE
Q psy14967         68 SNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTI  147 (168)
Q Consensus        68 ~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I  147 (168)
                      .+|+|++++|.|.++|||++++||+|++.++.|+|+|+++..+++.++..++|+|+|.||++||+++|+|+|++||+|+|
T Consensus         3 ~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~f~R~f~LP~~vd~~~v~A~~~~dGvL~I   82 (86)
T cd06475           3 SEIRQTADRWKVSLDVNHFAPEELVVKTKDGVVEITGKHEEKQDEHGFVSRCFTRKYTLPPGVDPTAVTSSLSPDGILTV   82 (86)
T ss_pred             ceEEEcCCeEEEEEECCCCCHHHEEEEEECCEEEEEEEECcCcCCCCEEEEEEEEEEECCCCCCHHHcEEEECCCCeEEE
Confidence            59999999999999999999999999999999999999876666677888999999999999999999999944999999


Q ss_pred             EEc
Q psy14967        148 TAP  150 (168)
Q Consensus       148 ~~P  150 (168)
                      ++|
T Consensus        83 ~lP   85 (86)
T cd06475          83 EAP   85 (86)
T ss_pred             Eec
Confidence            998

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Hsp27 shows enhanced synthesis in response to stress. It is a molecular chaperone which interacts with a large number of different proteins. It is found in many types of human cells including breast, uterus, cervix, platelets and cancer cells. Hsp27 has diverse cellular functions including, chaperoning, regulation of actin polymerization, keratinocyte differentiation, regulation of inflammatory pathways in keratinocytes, and protection from oxidative stress through modulating glutathione levels. It is also a subunit of AUF1-containing protein complexes. It has been linked to several transduction pathways regulating cellular functions including differentiat

>KOG3591|consensus

Probab=99.92  E-value=7.5e-24  Score=163.19  Aligned_cols=99  Identities=56%  Similarity=0.839  Sum_probs=92.2

Q ss_pred             CcceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCE
Q psy14967         65 SGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGV  144 (168)
Q Consensus        65 ~p~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~Gi  144 (168)
                      ....++..++++|.|.+|+..|+||+|+|++.|+.|.|+|+|+++++++|+++|+|.|+|.||++||+++|+++|+.||+
T Consensus        62 ~~~~~~~~~~~~F~V~lDV~~F~PeEl~Vk~~~~~l~V~gkHeer~d~~G~v~R~F~R~y~LP~~vdp~~V~S~LS~dGv  141 (173)
T KOG3591|consen   62 SGASEIVNDKDKFEVNLDVHQFKPEELKVKTDDNTLEVEGKHEEKEDEHGYVSRSFVRKYLLPEDVDPTSVTSTLSSDGV  141 (173)
T ss_pred             ccccccccCCCcEEEEEEcccCcccceEEEeCCCEEEEEeeeccccCCCCeEEEEEEEEecCCCCCChhheEEeeCCCce
Confidence            35688999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEcCcCCCC--CeeeEEE
Q psy14967        145 LTITAPKRVSTR--FYFFSLK  163 (168)
Q Consensus       145 L~I~~PK~~~~~--~~~i~i~  163 (168)
                      |+|++||.....  .+.|+|+
T Consensus       142 LtI~ap~~~~~~~~er~ipI~  162 (173)
T KOG3591|consen  142 LTIEAPKPPPKQDNERSIPIE  162 (173)
T ss_pred             EEEEccCCCCcCccceEEeEe
Confidence            999999998776  5555554

>cd06477 ACD_HspB3_Like Alpha crystallin domain (ACD) found in mammalian HspB3, also known as heat-shock protein 27-like protein (HSPL27, 17-kDa) and similar proteins

Probab=99.91  E-value=8e-24  Score=145.00  Aligned_cols=80  Identities=40%  Similarity=0.784  Sum_probs=73.5

Q ss_pred             EeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEEEEEc
Q psy14967         71 TNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAP  150 (168)
Q Consensus        71 ~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~~P  150 (168)
                      -+++++|.|+++||||+||||+|+++++.|+|+|+++.+.++.++..++|+|+|.||.+||.++|+|+|.+||+|+|++|
T Consensus         3 ~e~~~~~~v~~dlpG~~~edI~V~v~~~~L~I~ge~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~v~A~~~~dGvL~I~~~   82 (83)
T cd06477           3 EEGKPMFQILLDVVQFRPEDIIIQVFEGWLLIKGQHGVRMDEHGFISRSFTRQYQLPDGVEHKDLSAMLCHDGILVVETK   82 (83)
T ss_pred             ccCCceEEEEEEcCCCCHHHeEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcchheEEEEEcCCCEEEEEec
Confidence            36789999999999999999999999999999999876556677888999999999999999999999746999999986

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB3 is expressed in adult skeletal muscle, smooth muscle, and heart, and in several other fetal tissues. In muscle cells HspB3 forms an oligomeric 150 kDa complex with myotonic dystrophy protein kinase-binding protein (MKBP/ HspB2), this complex may comprise one of two independent muscle-cell specific chaperone systems. The expression of HspB3 is induced during muscle differentiation controlled by the myogenic factor MyoD. HspB3 may also interact with Hsp22 (HspB8).

>cd06479 ACD_HspB7_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB7, also known as cardiovascular small heat shock protein (cvHsp), and similar proteins

Probab=99.91  E-value=6.2e-24  Score=144.94  Aligned_cols=80  Identities=34%  Similarity=0.536  Sum_probs=73.0

Q ss_pred             eeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEEEE
Q psy14967         69 NITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTIT  148 (168)
Q Consensus        69 di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~  148 (168)
                      ||.|++++|.|.++||||+||||+|++++|.|+|+|+++...   +...++|+|+|.||.+||+++|+|+|++||+|+|+
T Consensus         2 ~v~e~~~~~~v~~dlpG~~pedi~V~v~~~~L~I~ger~~~~---~~~~g~F~R~~~LP~~vd~e~v~A~l~~~GvL~I~   78 (81)
T cd06479           2 NVKTLGDTYQFAVDVSDFSPEDIIVTTSNNQIEVHAEKLASD---GTVMNTFTHKCQLPEDVDPTSVSSSLGEDGTLTIK   78 (81)
T ss_pred             CccCcCCeEEEEEECCCCCHHHeEEEEECCEEEEEEEEeccC---CCEEEEEEEEEECCCCcCHHHeEEEecCCCEEEEE
Confidence            789999999999999999999999999999999999986432   34678999999999999999999997469999999


Q ss_pred             EcC
Q psy14967        149 APK  151 (168)
Q Consensus       149 ~PK  151 (168)
                      +++
T Consensus        79 ~~~   81 (81)
T cd06479          79 ARR   81 (81)
T ss_pred             ecC
Confidence            985

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB7 is a 25-kDa protein, preferentially expressed in heart and skeletal muscle. It binds the cytoskeleton protein alpha-filamin (also known as actin-binding protein 280). The expression of HspB7 is increased during rat muscle aging. Its expression is also modulated in obesity implicating this protein in this and related metabolic disorders. As the human gene encoding HspB7 is mapped to chromosome 1p36.23-p34.3 it is a positional candidate for several dystrophies and myopathies.

>PF00011 HSP20: Hsp20/alpha crystallin family This prints entry is a subset of the Pfam entry

Probab=99.91  E-value=2.9e-23  Score=146.47  Aligned_cols=94  Identities=32%  Similarity=0.564  Sum_probs=76.0

Q ss_pred             eeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCce-EE----EEEEEEEECCcCcccCCcEEEeCCCC
Q psy14967         69 NITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGF-IS----RQFKRRYLLPKDVEIEKVTSSLSSDG  143 (168)
Q Consensus        69 di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~-~~----r~F~r~~~LP~~vd~~~i~A~~~~~G  143 (168)
                      ||.+++++|.|.++||||+++||+|+++++.|+|+|++.....+..+ .+    ++|.|+|.||+++|.++|+|.| +||
T Consensus         1 di~e~~~~~~i~~~lpG~~~edi~I~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~f~r~~~lP~~vd~~~i~a~~-~~G   79 (102)
T PF00011_consen    1 DIKEDEDEYIIKVDLPGFDKEDIKIKVDDNKLVISGKRKEEEEDDRYYRSERRYGSFERSIRLPEDVDPDKIKASY-ENG   79 (102)
T ss_dssp             EEEESSSEEEEEEE-TTS-GGGEEEEEETTEEEEEEEEEGEECTTCEEEE-S-SEEEEEEEE-STTB-GGG-EEEE-TTS
T ss_pred             CeEECCCEEEEEEECCCCChHHEEEEEecCccceeceeeeeeeeeeeeecccccceEEEEEcCCCcCCcceEEEEe-cCC
Confidence            78999999999999999999999999999999999998833333333 33    6999999999999999999999 699


Q ss_pred             EEEEEEcCcCCC---CCeeeEEE
Q psy14967        144 VLTITAPKRVST---RFYFFSLK  163 (168)
Q Consensus       144 iL~I~~PK~~~~---~~~~i~i~  163 (168)
                      +|+|++||..+.   .+++|+|+
T Consensus        80 vL~I~~pk~~~~~~~~~~~I~I~  102 (102)
T PF00011_consen   80 VLTITIPKKEEEEDSQPKRIPIK  102 (102)
T ss_dssp             EEEEEEEBSSSCTTSSSCEE-ET
T ss_pred             EEEEEEEccccccCCCCeEEEeC
Confidence            999999999877   45776663

; InterPro: IPR002068 Prokaryotic and eukaryotic organisms respond to heat shock or other environmental stress by inducing the synthesis of proteins collectively known as heat-shock proteins (hsp) []. Amongst them is a family of proteins with an average molecular weight of 20 Kd, known as the hsp20 proteins []. These seem to act as chaperones that can protect other proteins against heat-induced denaturation and aggregation. Hsp20 proteins seem to form large heterooligomeric aggregates. Structurally, this family is characterised by the presence of a conserved C-terminal domain of about 100 residues.; PDB: 2BOL_B 3N3E_B 2H50_P 2H53_F 2BYU_L 1GME_D 3VQM_J 3VQK_E 3VQL_A 3AAC_A ....

>cd06480 ACD_HspB8_like Alpha-crystallin domain (ACD) found in mammalian 21

Probab=99.89  E-value=5.9e-23  Score=142.82  Aligned_cols=83  Identities=40%  Similarity=0.706  Sum_probs=77.6

Q ss_pred             eeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEEEE
Q psy14967         69 NITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTIT  148 (168)
Q Consensus        69 di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~  148 (168)
                      .+..++++|.|.+|+.||+||||+|++.++.|+|+|+++.+++++++++++|+|+|.||++||+++|+|+|++||+|+|+
T Consensus         9 ~~~~~~~~f~v~ldv~gF~pEDL~Vkv~~~~L~V~Gkh~~~~~e~g~~~r~F~R~~~LP~~Vd~~~v~s~l~~dGvL~Ie   88 (91)
T cd06480           9 PPPNSSEPWKVCVNVHSFKPEELTVKTKDGFVEVSGKHEEQQKEGGIVSKNFTKKIQLPPEVDPVTVFASLSPEGLLIIE   88 (91)
T ss_pred             CCCCCCCcEEEEEEeCCCCHHHcEEEEECCEEEEEEEECcccCCCCEEEEEEEEEEECCCCCCchhEEEEeCCCCeEEEE
Confidence            46678899999999999999999999999999999999887667789999999999999999999999999779999999


Q ss_pred             EcC
Q psy14967        149 APK  151 (168)
Q Consensus       149 ~PK  151 (168)
                      +|.
T Consensus        89 aP~   91 (91)
T cd06480          89 APQ   91 (91)
T ss_pred             cCC
Confidence            984

6 KDa small heat shock protein (sHsp) HspB8, also denoted as Hsp22 in humans, and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. A chaperone complex formed of HspB8 and Bag3 stimulates degradation of protein complexes by macroautophagy. HspB8 also forms complexes with Hsp27 (HspB1), MKBP (HspB2), HspB3, alphaB-crystallin (HspB5), Hsp20 (HspB6), and cvHsp (HspB7). These latter interactions may depend on phosphorylation of the respective partner sHsp. HspB8 may participate in the regulation of cell proliferation, cardiac hypertrophy, apoptosis, and carcinogenesis. Point mutations in HspB8 have been correlated with the development of several congenital neurological diseases, including Charcot Marie tooth disease and distal motor neuropathy type II.

>cd06472 ACD_ScHsp26_like Alpha crystallin domain (ACD) found in Saccharomyces cerevisiae (Sc) small heat shock protein (Hsp)26 and similar proteins

Probab=99.89  E-value=7.1e-23  Score=142.59  Aligned_cols=83  Identities=24%  Similarity=0.469  Sum_probs=72.6

Q ss_pred             eeeEeCCCeEEEEEeCCCCCCCceEEEEEC-CEEEEEEEEeccc--CCCceE-----EEEEEEEEECCcCcccCCcEEEe
Q psy14967         68 SNITNEENKVQVILDVQQFSPNEISIKTVD-GFILVEGKHEEKE--DEHGFI-----SRQFKRRYLLPKDVEIEKVTSSL  139 (168)
Q Consensus        68 ~di~e~~~~~~v~~~lpG~~~edi~V~v~~-~~L~I~g~~~~~~--~~~~~~-----~r~F~r~~~LP~~vd~~~i~A~~  139 (168)
                      +||+|++++|.|.++|||++++||+|++++ +.|+|+|++....  +...+.     .++|.|+|.||.+||.++|+|+|
T Consensus         2 ~dv~E~~~~~~i~~~lPGv~~edi~i~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~v~~~~i~A~~   81 (92)
T cd06472           2 VDWKETPEAHVFKADVPGVKKEDVKVEVEDGRVLRISGERKKEEEKKGDDWHRVERSSGRFVRRFRLPENADADEVKAFL   81 (92)
T ss_pred             ccEEEcCCeEEEEEECCCCChHhEEEEEeCCCEEEEEEEecccccccCCCEEEEEEeccEEEEEEECCCCCCHHHCEEEE
Confidence            799999999999999999999999999996 5899999875432  223333     45899999999999999999999


Q ss_pred             CCCCEEEEEEcC
Q psy14967        140 SSDGVLTITAPK  151 (168)
Q Consensus       140 ~~~GiL~I~~PK  151 (168)
                       +||+|+|++||
T Consensus        82 -~nGvL~I~lPK   92 (92)
T cd06472          82 -ENGVLTVTVPK   92 (92)
T ss_pred             -ECCEEEEEecC
Confidence             69999999997

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. ScHsp26 is temperature-regulated, it switches from an inactive to a chaperone-active form upon elevation in temperature. It associates into large 24-mers storage forms which upon heat shock disassociate into dimers. These dimers initiate the interaction with non-native substrate proteins and re-assemble into large globular assemblies having one monomer of substrate bound per dimer. This group also contains Arabidopsis thaliana (Ath) Hsp15.7, a peroxisomal matrix protein which can complement the morphological phenotype of S. cerevisiae mutants deficient in Hsps26. AthHsp15.7 is minimally expressed under normal conditions and is strongly induced by heat and oxidative st

>cd06481 ACD_HspB9_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB9 and similar proteins

Probab=99.88  E-value=2.9e-22  Score=138.50  Aligned_cols=80  Identities=36%  Similarity=0.592  Sum_probs=70.0

Q ss_pred             eCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccC-C-Cc--eEEEEEEEEEECCcCcccCCcEEEeCCCCEEEE
Q psy14967         72 NEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKED-E-HG--FISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTI  147 (168)
Q Consensus        72 e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~-~-~~--~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I  147 (168)
                      +.+++|.|.++||||+++||+|++++|.|+|+|+++.... + ..  +..++|+|+|.||++||.++|+|+|++||+|+|
T Consensus         4 ~~~d~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~F~R~~~LP~~Vd~~~i~A~~~~dGvL~I   83 (87)
T cd06481           4 DGKEGFSLKLDVRGFSPEDLSVRVDGRKLVVTGKREKKNEDEKGSFSYEYQEFVREAQLPEHVDPEAVTCSLSPSGHLHI   83 (87)
T ss_pred             CccceEEEEEECCCCChHHeEEEEECCEEEEEEEEeeecccCCCcEEEEeeEEEEEEECCCCcChHHeEEEeCCCceEEE
Confidence            5678999999999999999999999999999998765432 2 23  345899999999999999999999955999999


Q ss_pred             EEcC
Q psy14967        148 TAPK  151 (168)
Q Consensus       148 ~~PK  151 (168)
                      ++|+
T Consensus        84 ~~P~   87 (87)
T cd06481          84 RAPR   87 (87)
T ss_pred             EcCC
Confidence            9995

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB9 is expressed exclusively in the normal testis and in various tumor samples and is a cancer/testis antigen. hHspB9 interacts with TCTEL1 (T-complex testis expressed protein -1), a subunit of dynein. hHspB9 and TCTEL1 are co-expressed in similar cells within the testis and in tumor cells. Included in this group is Xenopus Hsp30, a developmentally-regulated heat-inducible molecular chaperone.

>cd06526 metazoan_ACD Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps)

Probab=99.88  E-value=3.1e-22  Score=136.92  Aligned_cols=77  Identities=60%  Similarity=0.975  Sum_probs=70.9

Q ss_pred             CCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCC-CEEEEEEcC
Q psy14967         74 ENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSD-GVLTITAPK  151 (168)
Q Consensus        74 ~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~-GiL~I~~PK  151 (168)
                      +++|.|.++||||+++||+|+++++.|+|+|+++...+..++..++|.|+|.||.+||+++++|+|+ | |+|+|++||
T Consensus         6 ~~~~~v~~dlpG~~~edI~v~v~~~~L~I~g~~~~~~~~~~~~~~~f~r~~~LP~~vd~~~i~A~~~-~~GvL~I~~Pk   83 (83)
T cd06526           6 DEKFQVTLDVKGFKPEELKVKVSDNKLVVEGKHEEREDEHGYVSREFTRRYQLPEGVDPDSVTSSLS-SDGVLTIEAPK   83 (83)
T ss_pred             CeeEEEEEECCCCCHHHcEEEEECCEEEEEEEEeeeccCCCEEEEEEEEEEECCCCCChHHeEEEeC-CCcEEEEEecC
Confidence            3699999999999999999999999999999987765446688899999999999999999999995 6 999999997

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.

>cd06471 ACD_LpsHSP_like Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18

Probab=99.88  E-value=3.7e-22  Score=139.04  Aligned_cols=83  Identities=29%  Similarity=0.598  Sum_probs=72.7

Q ss_pred             ceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEeccc---C-CCceE-----EEEEEEEEECCcCcccCCcEE
Q psy14967         67 VSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKE---D-EHGFI-----SRQFKRRYLLPKDVEIEKVTS  137 (168)
Q Consensus        67 ~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~---~-~~~~~-----~r~F~r~~~LP~~vd~~~i~A  137 (168)
                      .+||++++++|.|.++|||++++||+|+++++.|+|+|+++...   + +..+.     .++|.|+|.|| ++|.++|+|
T Consensus         2 ~~di~e~~~~~~i~~~lPGv~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lp-~v~~~~i~A   80 (93)
T cd06471           2 KTDIKETDDEYIVEADLPGFKKEDIKLDYKDGYLTISAKRDESKDEKDKKGNYIRRERYYGSFSRSFYLP-NVDEEEIKA   80 (93)
T ss_pred             ceeEEEcCCEEEEEEECCCCCHHHeEEEEECCEEEEEEEEccccccccccCCEEEEeeeccEEEEEEECC-CCCHHHCEE
Confidence            58999999999999999999999999999999999999986532   1 12243     35799999999 799999999


Q ss_pred             EeCCCCEEEEEEcC
Q psy14967        138 SLSSDGVLTITAPK  151 (168)
Q Consensus       138 ~~~~~GiL~I~~PK  151 (168)
                      +| +||+|+|++||
T Consensus        81 ~~-~dGvL~I~lPK   93 (93)
T cd06471          81 KY-ENGVLKITLPK   93 (93)
T ss_pred             EE-ECCEEEEEEcC
Confidence            99 69999999998

5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic me

>cd06482 ACD_HspB10 Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB10, also known as sperm outer dense fiber protein (ODFP), and similar proteins

Probab=99.87  E-value=1.8e-21  Score=134.38  Aligned_cols=79  Identities=25%  Similarity=0.438  Sum_probs=70.2

Q ss_pred             eCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccC---CCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEEEE
Q psy14967         72 NEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKED---EHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTIT  148 (168)
Q Consensus        72 e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~---~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~  148 (168)
                      .++++|+|.++|||++++||+|++++|.|+|+|+++..+.   ...+..++|.|+|.||.+||.++|+|+|+++|+|+|.
T Consensus         5 ~~~~~~~v~adlPG~~kedI~V~v~~~~L~I~ger~~~~e~~~~~er~~g~F~R~f~LP~~Vd~d~i~A~~~~~~~l~i~   84 (87)
T cd06482           5 CDSSNVLASVDVCGFEPDQVKVKVKDGKVQVSAERENRYDCLGSKKYSYMNICKEFSLPPGVDEKDVTYSYGLGSVVKIE   84 (87)
T ss_pred             ccCCEEEEEEECCCCCHHHeEEEEECCEEEEEEEEecccccCCccEEEEEEEEEEEECCCCcChHHcEEEEcCCCEEEEe
Confidence            5789999999999999999999999999999999865432   2346778999999999999999999999766799999


Q ss_pred             Ec
Q psy14967        149 AP  150 (168)
Q Consensus       149 ~P  150 (168)
                      .|
T Consensus        85 ~~   86 (87)
T cd06482          85 TP   86 (87)
T ss_pred             eC
Confidence            87

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB10 occurs exclusively in the axoneme of sperm cells and may have a cytoskeletal role.

>cd06470 ACD_IbpA-B_like Alpha-crystallin domain (ACD) found in Escherichia coli inclusion body-associated proteins IbpA and IbpB, and similar proteins

Probab=99.86  E-value=4.6e-21  Score=133.10  Aligned_cols=83  Identities=28%  Similarity=0.530  Sum_probs=71.8

Q ss_pred             cceeeEeCC-CeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccC-CCceE-----EEEEEEEEECCcCcccCCcEEE
Q psy14967         66 GVSNITNEE-NKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKED-EHGFI-----SRQFKRRYLLPKDVEIEKVTSS  138 (168)
Q Consensus        66 p~~di~e~~-~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~-~~~~~-----~r~F~r~~~LP~~vd~~~i~A~  138 (168)
                      |++||++++ ++|+|.++|||++++||+|+++++.|+|+|+++.... +..|.     .++|.|+|.||.+||.+  +|+
T Consensus         1 p~~di~e~~~~~~~v~~~lPG~~kedi~v~~~~~~L~I~g~~~~~~~~~~~~~~~e~~~g~f~R~~~LP~~vd~~--~A~   78 (90)
T cd06470           1 PPYNIEKTGENNYRITLAVAGFSEDDLEIEVENNQLTVTGKKADEENEEREYLHRGIAKRAFERSFNLADHVKVK--GAE   78 (90)
T ss_pred             CCeeeEEcCCCeEEEEEECCCCCHHHeEEEEECCEEEEEEEEcccccCCCcEEEEEEeceEEEEEEECCCCceEC--eeE
Confidence            468999975 9999999999999999999999999999999876542 33343     46899999999999975  999


Q ss_pred             eCCCCEEEEEEcC
Q psy14967        139 LSSDGVLTITAPK  151 (168)
Q Consensus       139 ~~~~GiL~I~~PK  151 (168)
                      | +||+|+|++|+
T Consensus        79 ~-~~GvL~I~l~~   90 (90)
T cd06470          79 L-ENGLLTIDLER   90 (90)
T ss_pred             E-eCCEEEEEEEC
Confidence            9 69999999985

IbpA and IbpB are 16 kDa small heat shock proteins (sHsps). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. IbpA and IbpB are produced during high-level production of various heterologous proteins, specifically human prorenin, renin and bovine insulin-like growth factor 2 (bIGF-2), and are strongly associated with inclusion bodies containing these heterologous proteins. IbpA and IbpB work as an integrated system to stabilize thermally aggregated proteins in a disaggregation competent state. The chaperone activity of IbpB is also significantly elevated as the temperature increases from normal to heat shock. The high temperature results in the disassociation of 2-3-MDa IbpB oligomers into smaller approximately 6

>cd06464 ACD_sHsps-like Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps)

Probab=99.82  E-value=7.7e-20  Score=124.55  Aligned_cols=82  Identities=34%  Similarity=0.608  Sum_probs=72.8

Q ss_pred             eeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCC------CceEEEEEEEEEECCcCcccCCcEEEeCCC
Q psy14967         69 NITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDE------HGFISRQFKRRYLLPKDVEIEKVTSSLSSD  142 (168)
Q Consensus        69 di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~------~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~  142 (168)
                      ++.+++++|.+.++|||+++++|+|++.++.|.|+|++......      .+...+.|.|+|.||..+|.++++|.| .|
T Consensus         1 ~i~e~~~~~~i~~~lpg~~~~~i~V~v~~~~l~I~g~~~~~~~~~~~~~~~~~~~~~f~r~~~LP~~vd~~~i~a~~-~~   79 (88)
T cd06464           1 DVYETDDAYVVEADLPGFKKEDIKVEVEDGVLTISGEREEEEEEEENYLRRERSYGSFSRSFRLPEDVDPDKIKASL-EN   79 (88)
T ss_pred             CcEEcCCEEEEEEECCCCCHHHeEEEEECCEEEEEEEEecccccCCcEEEEEEeCcEEEEEEECCCCcCHHHcEEEE-eC
Confidence            47889999999999999999999999999999999998765332      223457899999999999999999999 59


Q ss_pred             CEEEEEEcC
Q psy14967        143 GVLTITAPK  151 (168)
Q Consensus       143 GiL~I~~PK  151 (168)
                      |+|+|++||
T Consensus        80 G~L~I~~pk   88 (88)
T cd06464          80 GVLTITLPK   88 (88)
T ss_pred             CEEEEEEcC
Confidence            999999997

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.

>KOG0710|consensus

Probab=99.61  E-value=9.6e-16  Score=120.54  Aligned_cols=99  Identities=19%  Similarity=0.439  Sum_probs=82.5

Q ss_pred             CcceeeEeCCCeEEEEEeCCCCCCCceEEEEECC-EEEEEEEEecccCC----Cce-----EEEEEEEEEECCcCcccCC
Q psy14967         65 SGVSNITNEENKVQVILDVQQFSPNEISIKTVDG-FILVEGKHEEKEDE----HGF-----ISRQFKRRYLLPKDVEIEK  134 (168)
Q Consensus        65 ~p~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~-~L~I~g~~~~~~~~----~~~-----~~r~F~r~~~LP~~vd~~~  134 (168)
                      .+..+|.+..+.|.+.+++||+..++++|+++++ +|+|+|+++...++    ..+     ..+.|.|++.||++++.++
T Consensus        84 ~~~~~v~e~~~~~~~~~~~Pgl~ke~iKv~~~~~~~l~isGe~~~e~e~~~~~~~~~~~E~~~g~F~r~~~lPenv~~d~  163 (196)
T KOG0710|consen   84 RVPWDVKESPDAHEFKVDLPGLKKEDIKVEVEDEKVLTISGERKKEEEESGSGKKWKRVERKLGKFKRRFELPENVDVDE  163 (196)
T ss_pred             cCCcccccCCCceEEEeeCCCCCchhceEEeccCcEEEEecccccccccccCCccceeehhcccceEeeecCCccccHHH
Confidence            4677899999999999999999999999999987 79999987654322    122     2358999999999999999


Q ss_pred             cEEEeCCCCEEEEEEcCcCCC--CCeeeEEEe
Q psy14967        135 VTSSLSSDGVLTITAPKRVST--RFYFFSLKL  164 (168)
Q Consensus       135 i~A~~~~~GiL~I~~PK~~~~--~~~~i~i~~  164 (168)
                      |+|.| +||+|+|++||..+.  +++...|.+
T Consensus       164 ikA~~-~nGVL~VvvpK~~~~~~~~~v~~i~i  194 (196)
T KOG0710|consen  164 IKAEM-ENGVLTVVVPKLEPLLKKPKVRQIAI  194 (196)
T ss_pred             HHHHh-hCCeEEEEEecccccccCCccceeec
Confidence            99999 699999999999984  555555443

>cd00298 ACD_sHsps_p23-like This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat shock proteins (sHsps) and a similar domain found in p23-like proteins

Probab=99.60  E-value=1.2e-14  Score=95.50  Aligned_cols=80  Identities=34%  Similarity=0.562  Sum_probs=71.4

Q ss_pred             eEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEEEEE
Q psy14967         70 ITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITA  149 (168)
Q Consensus        70 i~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~~  149 (168)
                      ++++++.|.|++++||+.+++++|++.++.|.|+|++..... .+...+.|.+.+.||..+|+++++|.+ .+|+|+|++
T Consensus         1 ~~q~~~~v~i~i~~~~~~~~~i~v~~~~~~l~v~~~~~~~~~-~~~~~~~~~~~~~L~~~i~~~~~~~~~-~~~~l~i~l   78 (80)
T cd00298           1 WYQTDDEVVVTVDLPGVKKEDIKVEVEDNVLTISGKREEEEE-RERSYGEFERSFELPEDVDPEKSKASL-ENGVLEITL   78 (80)
T ss_pred             CEEcCCEEEEEEECCCCCHHHeEEEEECCEEEEEEEEcCCCc-ceEeeeeEEEEEECCCCcCHHHCEEEE-ECCEEEEEE
Confidence            357789999999999999999999999999999998765433 445568999999999999999999999 599999999


Q ss_pred             cC
Q psy14967        150 PK  151 (168)
Q Consensus       150 PK  151 (168)
                      ||
T Consensus        79 ~K   80 (80)
T cd00298          79 PK   80 (80)
T ss_pred             cC
Confidence            97

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is this ACD. sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. p23 is a cochaperone of the Hsp90 chaperoning pathway. It binds Hsp90 and participates in the folding of a number of Hsp90 clients including the progesterone receptor. p23 also has a passive chaperoning activity. p23 in addition may act as the cytosolic prostaglandin E2 synthase. Included in this family is the p23-like C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1) and the p23-like domains of human butyrate-induced transcript 1 (hB-ind

>cd06469 p23_DYX1C1_like p23_like domain found in proteins similar to dyslexia susceptibility 1 (DYX1) candidate 1 (C1) protein, DYX1C1

Probab=99.34  E-value=6.8e-12  Score=84.01  Aligned_cols=70  Identities=17%  Similarity=0.284  Sum_probs=64.6

Q ss_pred             EeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEEEEEc
Q psy14967         71 TNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAP  150 (168)
Q Consensus        71 ~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~~P  150 (168)
                      +++++.+.|++++||+++++++|+++++.|.|+|             ..|.+.+.||..||+++.++++ .+|.|.|+++
T Consensus         2 ~Qt~~~v~i~i~~p~v~~~~v~v~~~~~~l~i~~-------------~~~~~~~~l~~~I~~e~~~~~~-~~~~l~i~L~   67 (78)
T cd06469           2 SQTDEDVKISVPLKGVKTSKVDIFCSDLYLKVNF-------------PPYLFELDLAAPIDDEKSSAKI-GNGVLVFTLV   67 (78)
T ss_pred             cccCCEEEEEEEeCCCccccceEEEecCEEEEcC-------------CCEEEEEeCcccccccccEEEE-eCCEEEEEEE
Confidence            5788999999999999999999999999999988             1488999999999999999999 5999999999


Q ss_pred             CcCC
Q psy14967        151 KRVS  154 (168)
Q Consensus       151 K~~~  154 (168)
                      |.++
T Consensus        68 K~~~   71 (78)
T cd06469          68 KKEP   71 (78)
T ss_pred             eCCC
Confidence            9765

The human gene encoding this protein is a positional candidate gene for developmental dyslexia (DD), it is located on 15q21.3 by the DYX1 DD susceptibility locus (15q15-21). Independent association studies have reported conflicting results. However, association of short-term memory, which plays a role in DD, with a variant within the DYX1C1 gene has been reported. Most proteins belonging to this group contain a C-terminal tetratricopeptide repeat (TPR) protein binding region.

>PF05455 GvpH: GvpH; InterPro: IPR008633 This family consists of archaeal GvpH proteins which are thought to be involved in gas vesicle synthesis []

Probab=99.08  E-value=1e-09  Score=84.34  Aligned_cols=80  Identities=18%  Similarity=0.317  Sum_probs=64.3

Q ss_pred             CCcceeeEeCCC-eEEEEEeCCCCCCCc-eEEEEEC--CEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEe
Q psy14967         64 NSGVSNITNEEN-KVQVILDVQQFSPNE-ISIKTVD--GFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSL  139 (168)
Q Consensus        64 ~~p~~di~e~~~-~~~v~~~lpG~~~ed-i~V~v~~--~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~  139 (168)
                      ..+.+++.+.++ +++|.++|||+++++ |+|.++.  +.|+|+..            ..+.+++.||.. +++.++++|
T Consensus        90 ~~~~vdtre~dDge~~VvAdLPGVs~dd~idV~l~~d~~~L~i~~~------------~~~~krv~L~~~-~~e~~~~t~  156 (177)
T PF05455_consen   90 ESIHVDTRERDDGELVVVADLPGVSDDDAIDVTLDDDEGALTIRVG------------EKYLKRVALPWP-DPEITSATF  156 (177)
T ss_pred             ceeeeeeEecCCCcEEEEEeCCCCCcccceeeEeecCCceEEEecC------------CceEeeEecCCC-ccceeeEEE
Confidence            457789998888 699999999999888 9999985  55555432            236789999977 789999999


Q ss_pred             CCCCEEEEEEcCcCCCCC
Q psy14967        140 SSDGVLTITAPKRVSTRF  157 (168)
Q Consensus       140 ~~~GiL~I~~PK~~~~~~  157 (168)
                       +||||+|++-+.++...
T Consensus       157 -nNgILEIri~~~~~~~~  173 (177)
T PF05455_consen  157 -NNGILEIRIRRTEESSG  173 (177)
T ss_pred             -eCceEEEEEeecCCCCC
Confidence             69999999988776543

>cd06463 p23_like Proteins containing this p23_like domain include p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1

Probab=99.05  E-value=2e-09  Score=71.89  Aligned_cols=75  Identities=12%  Similarity=0.168  Sum_probs=66.6

Q ss_pred             EeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEEEEEc
Q psy14967         71 TNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAP  150 (168)
Q Consensus        71 ~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~~P  150 (168)
                      +++++.+.|.+.+||..++++.|.+.++.|.|++....        ...|...+.|+..|++++.++++ .+|.|.|+++
T Consensus         2 ~Q~~~~v~i~v~~~~~~~~~~~v~~~~~~l~i~~~~~~--------~~~~~~~~~L~~~I~~~~s~~~~-~~~~l~i~L~   72 (84)
T cd06463           2 YQTLDEVTITIPLKDVTKKDVKVEFTPKSLTVSVKGGG--------GKEYLLEGELFGPIDPEESKWTV-EDRKIEITLK   72 (84)
T ss_pred             cccccEEEEEEEcCCCCccceEEEEecCEEEEEeeCCC--------CCceEEeeEccCccchhhcEEEE-eCCEEEEEEE
Confidence            46789999999999999999999999999999997431        13678889999999999999999 5999999999


Q ss_pred             CcCC
Q psy14967        151 KRVS  154 (168)
Q Consensus       151 K~~~  154 (168)
                      |+.+
T Consensus        73 K~~~   76 (84)
T cd06463          73 KKEP   76 (84)
T ss_pred             ECCC
Confidence            9876

Both are co-chaperones for the heat shock protein (Hsp) 90. p23 binds Hsp90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis. Both p23 and Sba1p can regulate telomerase activity. This group includes domains similar to the C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1). Sgt1 interacts with multiple protein complexes and has the features of a co-chaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. This group also includes the p23_like domains of

>cd06466 p23_CS_SGT1_like p23_like domain similar to the C-terminal CHORD-SGT1 (CS) domain of Sgt1 (suppressor of G2 allele of Skp1)

Probab=98.80  E-value=3.2e-08  Score=66.81  Aligned_cols=77  Identities=12%  Similarity=0.108  Sum_probs=67.6

Q ss_pred             eeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEEEE
Q psy14967         69 NITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTIT  148 (168)
Q Consensus        69 di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~  148 (168)
                      |++++++.+.|.+.+||+.++++.|.+.++.|.|++...    .    .+.|...+.|+..|++++.++.+ .+|.|.|+
T Consensus         1 dW~Qt~~~v~i~v~~~~~~~~~v~v~~~~~~l~i~~~~~----~----~~~~~~~~~L~~~I~~~~s~~~~-~~~~vei~   71 (84)
T cd06466           1 DWYQTDTSVTVTIYAKNVDKEDVKVEFNEQSLSVSIILP----G----GSEYQLELDLFGPIDPEQSKVSV-LPTKVEIT   71 (84)
T ss_pred             CccccCCEEEEEEEECCCCHHHCEEEEecCEEEEEEECC----C----CCeEEEecccccccCchhcEEEE-eCeEEEEE
Confidence            467889999999999999999999999999999998643    0    13678889999999999999999 59999999


Q ss_pred             EcCcCC
Q psy14967        149 APKRVS  154 (168)
Q Consensus       149 ~PK~~~  154 (168)
                      +.|..+
T Consensus        72 L~K~~~   77 (84)
T cd06466          72 LKKAEP   77 (84)
T ss_pred             EEcCCC
Confidence            999875

Sgt1 interacts with multiple protein complexes and has the features of a cochaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. ScSgt1 is needed for the G1/S and G2/M cell-cycle transitions, and for assembly of the core kinetochore complex (CBF3) via activation of Ctf13, the F-box protein. Binding of Hsp82 (a yeast Hsp90 homologue) to ScSgt1, promotes the binding of Sgt1 to Skp1 and of Skp1 to Ctf13. Some proteins in this group have an SGT1-specific (SGS) domain at the extreme C-terminus. The ScSgt1-SGS domain binds adenylate cyclase. The hSgt1-SGS domain interacts with some S100 family proteins, and studies sug

>PF04969 CS: CS domain; InterPro: IPR017447 The function of the CS domain is unknown

Probab=98.38  E-value=1e-05  Score=53.21  Aligned_cols=77  Identities=17%  Similarity=0.214  Sum_probs=63.9

Q ss_pred             cceeeEeCCCeEEEEEeCCCC--CCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCC
Q psy14967         66 GVSNITNEENKVQVILDVQQF--SPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDG  143 (168)
Q Consensus        66 p~~di~e~~~~~~v~~~lpG~--~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~G  143 (168)
                      |..+++++++.+.|.+.+++.  ++++++|.+.++.|.|+......        ..|.-...|...|+++..+..+ .++
T Consensus         1 ~~y~W~Qt~~~V~v~i~~~~~~~~~~dv~v~~~~~~l~v~~~~~~~--------~~~~~~~~L~~~I~~~~s~~~~-~~~   71 (79)
T PF04969_consen    1 PRYDWYQTDDEVTVTIPVKPVDISKEDVKVDFTDTSLSVSIKSGDG--------KEYLLEGELFGEIDPDESTWKV-KDN   71 (79)
T ss_dssp             SSEEEEEESSEEEEEEE-TTTTSSGGGEEEEEETTEEEEEEEETTS--------CEEEEEEEBSS-BECCCEEEEE-ETT
T ss_pred             CCeEEEECCCEEEEEEEEcCCCCChHHeEEEEEeeEEEEEEEccCC--------ceEEEEEEEeeeEcchhcEEEE-ECC
Confidence            346889999999999999665  59999999999999999753321        3677788899999999999999 499


Q ss_pred             EEEEEEcC
Q psy14967        144 VLTITAPK  151 (168)
Q Consensus       144 iL~I~~PK  151 (168)
                      .|.|+|.|
T Consensus        72 ~i~i~L~K   79 (79)
T PF04969_consen   72 KIEITLKK   79 (79)
T ss_dssp             EEEEEEEB
T ss_pred             EEEEEEEC
Confidence            99999986

The CS domain is sometimes found C-terminal to the CHORD domain (IPR007051 from INTERPRO) in metazoan proteins, but occurs separately from the CHORD domain in plants. This association is thought to be indicative of an functional interaction between CS and CHORD domains [].; PDB: 1WGV_A 2KMW_A 2O30_B 1WH0_A 1EJF_A 2RH0_B 1RL1_A 2CR0_A 1WFI_A 2XCM_D ....

>cd06465 p23_hB-ind1_like p23_like domain found in human (h) butyrate-induced transcript 1 (B-ind1) and similar proteins

Probab=98.18  E-value=3.9e-05  Score=54.52  Aligned_cols=78  Identities=9%  Similarity=0.109  Sum_probs=67.0

Q ss_pred             cceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEE
Q psy14967         66 GVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVL  145 (168)
Q Consensus        66 p~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL  145 (168)
                      |..+.+.+.+.+.|.+.+||.  ++++|.+..+.|.|++....  ++     +.|.-.+.|...|++++.+.++ .++.|
T Consensus         1 p~~~W~Qt~~~V~i~i~~~~~--~~~~V~~~~~~l~v~~~~~~--~~-----~~y~~~~~L~~~I~pe~s~~~v-~~~kv   70 (108)
T cd06465           1 PPVLWAQRSDVVYLTIELPDA--KDPKIKLEPTSLSFKAKGGG--GG-----KKYEFDLEFYKEIDPEESKYKV-TGRQI   70 (108)
T ss_pred             CceeeeECCCEEEEEEEeCCC--CCcEEEEECCEEEEEEEcCC--CC-----eeEEEEeEhhhhccccccEEEe-cCCeE
Confidence            357889999999999999998  89999999999999985321  11     3577788999999999999999 58999


Q ss_pred             EEEEcCcC
Q psy14967        146 TITAPKRV  153 (168)
Q Consensus       146 ~I~~PK~~  153 (168)
                      .|+|.|..
T Consensus        71 eI~L~K~~   78 (108)
T cd06465          71 EFVLRKKE   78 (108)
T ss_pred             EEEEEECC
Confidence            99999987

hB-ind1 participates in signaling by the small GTPase Rac1. It binds to Rac1 and enhances different Rac1 effects including activation of nuclear factor (NF) kappaB and activation of c-Jun N-terminal kinase (JNK). hB-ind1 also plays a part in the RNA replication and particle production of Hepatitis C virus (HCV) through its interaction with heat shock protein Hsp90, HCV nonstructural protein 5A (NS5A), and the immunophilin FKBP8. hB-ind1 is upregulated in the outer layer of Chinese hamster V79 cells grown as multicell spheroids, versus in the same cells grown as monolayers. This group includes the Saccharomyces cerevisiae Sba1, a co-chaperone of the Hsp90. Sba1 has been shown to be is required for telomere length maintenance, and may modulate telomerase DNA-binding activity.

>cd06489 p23_CS_hSgt1_like p23_like domain similar to the C-terminal CS (CHORD-SGT1) domain of human (h) Sgt1 and related proteins

Probab=98.13  E-value=2.5e-05  Score=52.88  Aligned_cols=77  Identities=12%  Similarity=0.169  Sum_probs=65.1

Q ss_pred             eeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEEEE
Q psy14967         69 NITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTIT  148 (168)
Q Consensus        69 di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~  148 (168)
                      |.+++++.+.|++.++|+.++++.|++.++.|.+++...   ++     ..|.-.+.|...|++++.+...+ .+.+.|.
T Consensus         1 dW~Q~~~~V~iti~~k~~~~~~~~v~~~~~~l~~~~~~~---~~-----~~y~~~~~L~~~I~p~~s~~~v~-~~kiei~   71 (84)
T cd06489           1 DWYQTESQVVITILIKNVKPEDVSVEFEKRELSATVKLP---SG-----NDYSLKLHLLHPIVPEQSSYKIL-STKIEIK   71 (84)
T ss_pred             CccccCCEEEEEEEECCCCHHHCEEEEeCCEEEEEEECC---CC-----CcEEEeeecCceecchhcEEEEe-CcEEEEE
Confidence            457788999999999999999999999999999998642   11     24667789999999999999985 8889999


Q ss_pred             EcCcCC
Q psy14967        149 APKRVS  154 (168)
Q Consensus       149 ~PK~~~  154 (168)
                      |.|++.
T Consensus        72 L~K~~~   77 (84)
T cd06489          72 LKKTEA   77 (84)
T ss_pred             EEcCCC
Confidence            999753

hSgt1 is a co-chaperone which has been shown to be elevated in HEp-2 cells as a result of stress conditions such as heat shock. It interacts with the heat shock proteins (HSPs) Hsp70 and Hsp90, and it expression pattern is synchronized with these two Hsps. The interaction with HSP90 has been shown to involve the hSgt1_CS domain, and appears to be required for correct kinetochore assembly and efficient cell division. Some proteins in this subgroup contain a tetratricopeptide repeat (TPR) HSP-binding domain N-terminal to this CS domain, and most proteins in this subgroup contain a Sgt1-specific (SGS) domain C-terminal to the CS domain. The SGS domain interacts with some S100 family proteins. Studies suggest that S100A6 modulates in a Ca2+ dependent manner the interactions of hSgt1 with Hsp90 and Hsp70. The yeast Sgt1 CS domain is not found in this subgroup.

>PF08190 PIH1: pre-RNA processing PIH1/Nop17

Probab=97.97  E-value=5e-05  Score=63.44  Aligned_cols=66  Identities=15%  Similarity=0.315  Sum_probs=58.3

Q ss_pred             CCeEEEEEeCCCC-CCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeC-CCCEEEEEEc
Q psy14967         74 ENKVQVILDVQQF-SPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLS-SDGVLTITAP  150 (168)
Q Consensus        74 ~~~~~v~~~lpG~-~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~-~~GiL~I~~P  150 (168)
                      .+.++|+++|||+ +..+|+|.|.++.|.|.....           .|.=.+.||..||.+..+|.|. +.++|+|++|
T Consensus       260 p~~lvv~i~LP~~~s~~~i~LdV~~~~l~l~~~~~-----------~y~L~l~LP~~V~~~~~~Akf~~~~~~L~vtlp  327 (328)
T PF08190_consen  260 PEELVVEIELPGVESASDIDLDVSEDRLSLSSPKP-----------KYRLDLPLPYPVDEDNGKAKFDKKTKTLTVTLP  327 (328)
T ss_pred             CceEEEEEECCCcCccceeEEEEeCCEEEEEeCCC-----------ceEEEccCCCcccCCCceEEEccCCCEEEEEEE
Confidence            5889999999999 899999999999999987522           4667799999999999999985 3499999998

>cd06488 p23_melusin_like p23_like domain similar to the C-terminal (tail) domain of vertebrate Melusin and related proteins

Probab=97.80  E-value=0.00042  Score=47.39  Aligned_cols=78  Identities=13%  Similarity=0.137  Sum_probs=67.0

Q ss_pred             eeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEEE
Q psy14967         68 SNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTI  147 (168)
Q Consensus        68 ~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I  147 (168)
                      -|.+.+++.+.|.+.+.|..+++++|.++++.|.|+.....   +     ..|.-.+.|-..|++++.+... ..+.+.|
T Consensus         3 ~dW~Qs~~~V~ItI~~k~~~~~~~~v~~~~~~l~v~~~~~~---~-----~~y~~~l~L~~~I~~~~s~~~v-~~~kvei   73 (87)
T cd06488           3 HDWHQTGSHVVVSVYAKNSNPELSVVEANSTVLTIHIVFEG---N-----KEFQLDIELWGVIDVEKSSVNM-LPTKVEI   73 (87)
T ss_pred             ccEeeCCCEEEEEEEECcCCccceEEEecCCEEEEEEECCC---C-----ceEEEEeeccceEChhHcEEEe-cCcEEEE
Confidence            47899999999999999999999999999999998765331   1     2577788999999999988888 4999999


Q ss_pred             EEcCcCC
Q psy14967        148 TAPKRVS  154 (168)
Q Consensus       148 ~~PK~~~  154 (168)
                      ++.|+++
T Consensus        74 ~L~K~~~   80 (87)
T cd06488          74 KLRKAEP   80 (87)
T ss_pred             EEEeCCC
Confidence            9999875

Melusin's tail domain interacts with the cytoplasmic domain of beta1-A and beta1-D isoforms of beta1 integrin, it does not bind other integrin beta subunits. Melusin is a muscle-specific protein expressed in skeletal and cardiac muscles but not in smooth muscle or other tissues. It is needed for heart hypertrophy following mechanical overload. The integrin-binding portion of this domain appears to be sequestered in the full length melusin protein, Ca2+ may modulate the protein's conformation exposing this binding site. This group includes Chordc1, also known as Chp-1, which is conserved from vertebrates to humans. Mammalian Chordc1 interacts with the heat shock protein (HSP) Hsp90 and is implicated in circadian and/or homeostatic mechanisms in the brain. The N-terminal portions of proteins belonging to this group contain two cysteine and histidine rich domain (C

>cd06467 p23_NUDC_like p23_like domain of NUD (nuclear distribution) C and similar proteins

Probab=97.77  E-value=0.00024  Score=47.79  Aligned_cols=74  Identities=20%  Similarity=0.193  Sum_probs=60.4

Q ss_pred             eeEeCCCeEEEEEeCC-CCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCC-CEEE
Q psy14967         69 NITNEENKVQVILDVQ-QFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSD-GVLT  146 (168)
Q Consensus        69 di~e~~~~~~v~~~lp-G~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~-GiL~  146 (168)
                      ..+++++.+.|.+.+| |+.++|++|++.++.|.|+.+..           ...-.-.|...||++...-.+ .+ ..|.
T Consensus         2 ~W~Qt~~~V~i~i~~~~~~~~~dv~v~~~~~~l~v~~~~~-----------~~~l~~~L~~~I~~~~s~w~~-~~~~~v~   69 (85)
T cd06467           2 SWTQTLDEVTVTIPLPEGTKSKDVKVEITPKHLKVGVKGG-----------EPLLDGELYAKVKVDESTWTL-EDGKLLE   69 (85)
T ss_pred             EEEeeCCEEEEEEECCCCCcceeEEEEEEcCEEEEEECCC-----------CceEcCcccCceeEcCCEEEE-eCCCEEE
Confidence            3567889999999997 78999999999999999987421           111223689999999998888 48 9999


Q ss_pred             EEEcCcCC
Q psy14967        147 ITAPKRVS  154 (168)
Q Consensus       147 I~~PK~~~  154 (168)
                      |+++|+++
T Consensus        70 i~L~K~~~   77 (85)
T cd06467          70 ITLEKRNE   77 (85)
T ss_pred             EEEEECCC
Confidence            99999876

Aspergillus nidulas (An) NUDC is needed for nuclear movement. AnNUDC is localized at the hyphal cortex, and binds NUDF at spindle pole bodies (SPBs) and in the cytoplasm at different stages in the cell cycle. At the SPBs it is part of the dynein molecular motor/NUDF complex that regulates microtubule dynamics. Mammalian(m) NUDC associates both with the dynein complex and also with an anti-inflammatory enzyme, platelet activating factor acetylhydrolase I, PAF-AH(I) complex, through binding mNUDF, the regulatory beta subunit of PAF-AH(I). mNUDC is important for cell proliferation both in normal and tumor tissues. Its expression is elevated in various cell types undergoing mitosis or stimulated to proliferate, with high expression levels observed in leukemic cells and tumors. For a leukemic cell line, human NUDC was shown to activate the thrombopoietin (TPO) receptor (Mpl) by binding to its ext

>cd06468 p23_CacyBP p23_like domain found in proteins similar to Calcyclin-Binding Protein(CacyBP)/Siah-1-interacting protein (SIP)

Probab=97.76  E-value=0.0005  Score=47.09  Aligned_cols=78  Identities=12%  Similarity=0.184  Sum_probs=64.2

Q ss_pred             eeeEeCCCeEEEEEeCCCCCC---CceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEE-CCcCcccCCcEEEeCCCC
Q psy14967         68 SNITNEENKVQVILDVQQFSP---NEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYL-LPKDVEIEKVTSSLSSDG  143 (168)
Q Consensus        68 ~di~e~~~~~~v~~~lpG~~~---edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~-LP~~vd~~~i~A~~~~~G  143 (168)
                      -+.+++++.+.|.+.+|+..+   ++++|++..+.|.|++....   +     ..|.-.+. |-..|++++.+..++ .+
T Consensus         4 y~W~Qt~~~V~i~i~~~~~~~~~~~~v~v~~~~~~l~v~~~~~~---~-----~~~~~~~~~L~~~I~~e~s~~~~~-~~   74 (92)
T cd06468           4 YAWDQSDKFVKIYITLKGVHQLPKENIQVEFTERSFELKVHDLN---G-----KNYRFTINRLLKKIDPEKSSFKVK-TD   74 (92)
T ss_pred             eeeecCCCEEEEEEEccCCCcCCcccEEEEecCCEEEEEEECCC---C-----cEEEEEehHhhCccCccccEEEEe-CC
Confidence            367889999999999999887   99999999999999985311   1     23444554 899999999999994 89


Q ss_pred             EEEEEEcCcCC
Q psy14967        144 VLTITAPKRVS  154 (168)
Q Consensus       144 iL~I~~PK~~~  154 (168)
                      -+.|+|.|+++
T Consensus        75 ki~i~L~K~~~   85 (92)
T cd06468          75 RIVITLAKKKE   85 (92)
T ss_pred             EEEEEEEeCCC
Confidence            99999999875

CacyBP/SIP interacts with S100A6 (calcyclin), with some other members of the S100 family, with tubulin, and with Siah-1 and Skp-1. The latter two are components of the ubiquitin ligase that regulates beta-catenin degradation. The beta-catenin gene is an oncogene participating in tumorigenesis in many different cancers. Overexpression of CacyBP/SIP, in part through its effect on the expression of beta-catenin, inhibits the proliferation, tumorigenicity, and invasion of gastric cancer cells. CacyBP/SIP is abundant in neurons and neuroblastoma NB2a cells. An extensive re-organization of microtubules accompanies the differentiation of NB2a cells. CacyBP/SIP may contribute to NB2a cell differentiation through binding to and increasing the oligomerization of tubulin. CacyBP/SIP is also implicated in differentiation of erythroid cells, rat neonatal cardiomyocytes

>cd00237 p23 p23 binds heat shock protein (Hsp)90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor

Probab=97.70  E-value=0.0011  Score=47.22  Aligned_cols=79  Identities=9%  Similarity=0.047  Sum_probs=64.3

Q ss_pred             cceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEE
Q psy14967         66 GVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVL  145 (168)
Q Consensus        66 p~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL  145 (168)
                      |.++.++..+.+.|++++|+  .+|++|+++++.|.++|...   ++.     .|.-.+.|=..|++++-+...+ .-.+
T Consensus         2 p~v~WaQr~~~V~ltI~v~d--~~d~~v~l~~~~l~f~~~~~---~g~-----~y~~~l~l~~~I~pe~Sk~~v~-~r~v   70 (106)
T cd00237           2 AKTLWYDRRDYVFIEFCVED--SKDVKVDFEKSKLTFSCLNG---DNV-----KIYNEIELYDRVDPNDSKHKRT-DRSI   70 (106)
T ss_pred             CcceeeECCCEEEEEEEeCC--CCCcEEEEecCEEEEEEECC---CCc-----EEEEEEEeecccCcccCeEEeC-CceE
Confidence            56889999999999999999  68999999999999998431   111     3556778889999998888874 7778


Q ss_pred             EEEEcCcCCC
Q psy14967        146 TITAPKRVST  155 (168)
Q Consensus       146 ~I~~PK~~~~  155 (168)
                      .|.+.|+++.
T Consensus        71 e~~L~K~~~~   80 (106)
T cd00237          71 LCCLRKGKEG   80 (106)
T ss_pred             EEEEEeCCCC
Confidence            8899988643

p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis.

>cd06493 p23_NUDCD1_like p23_NUDCD1: p23-like NUD (nuclear distribution) C-like domain found in human NUD (nuclear distribution) C domain-containing protein 1, NUDCD1 (also known as CML66), and similar proteins

Probab=97.60  E-value=0.00089  Score=45.48  Aligned_cols=75  Identities=15%  Similarity=0.174  Sum_probs=59.3

Q ss_pred             eeEeCCCeEEEEEeCC-CCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCC-EEE
Q psy14967         69 NITNEENKVQVILDVQ-QFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDG-VLT  146 (168)
Q Consensus        69 di~e~~~~~~v~~~lp-G~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~G-iL~  146 (168)
                      +.+.+.+.+.|.+.+| |..++|++|++..+.|.|..+..     .     .+ -.-.|...|+++.-.=++ .+| .|.
T Consensus         2 ~W~Qt~~~V~v~i~~p~~~~~~dv~v~~~~~~l~v~~~~~-----~-----~~-~~g~L~~~I~~d~Stw~i-~~~~~l~   69 (85)
T cd06493           2 YWQQTEEDLTLTIRLPEDTTKEDIRIKFLPDHISIALKDQ-----A-----PL-LEGKLYSSIDHESSTWII-KENKSLE   69 (85)
T ss_pred             ccEEeCCEEEEEEECCCCCChhhEEEEEecCEEEEEeCCC-----C-----eE-EeCcccCcccccCcEEEE-eCCCEEE
Confidence            4578899999999996 99999999999999999976311     1     11 233789999999888777 466 699


Q ss_pred             EEEcCcCCC
Q psy14967        147 ITAPKRVST  155 (168)
Q Consensus       147 I~~PK~~~~  155 (168)
                      |.+.|+++.
T Consensus        70 i~L~K~~~~   78 (85)
T cd06493          70 VSLIKKDEG   78 (85)
T ss_pred             EEEEECCCC
Confidence            999998754

NUDCD1/CML66 is a broadly immunogenic tumor associated antigen, which is highly expressed in a variety of solid tumors and in leukemias. In normal tissues high expression of NUDCD1/CML66 is limited to testis and heart.

>cd06494 p23_NUDCD2_like p23-like NUD (nuclear distribution) C-like found in human NUDC domain-containing protein 2 (NUDCD2) and similar proteins

Probab=96.91  E-value=0.014  Score=40.64  Aligned_cols=77  Identities=16%  Similarity=0.085  Sum_probs=60.9

Q ss_pred             cceeeEeCCCeEEEEEeCC-CCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCE
Q psy14967         66 GVSNITNEENKVQVILDVQ-QFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGV  144 (168)
Q Consensus        66 p~~di~e~~~~~~v~~~lp-G~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~Gi  144 (168)
                      +....+.+.+.+.|++.+| |.++.|+.|++..+.|.|.-+.+      .+..+      .|...|+++.-.=++ ++|-
T Consensus         6 ~~y~W~QT~~eV~v~i~lp~~~~~kdv~V~i~~~~l~V~~~g~------~~l~G------~L~~~I~~destWtl-ed~k   72 (93)
T cd06494           6 PWGCWYQTMDEVFIEVNVPPGTRAKDVKCKLGSRDISLAVKGQ------EVLKG------KLFDSVVADECTWTL-EDRK   72 (93)
T ss_pred             CCcEEEeEcCEEEEEEECCCCCceeeEEEEEEcCEEEEEECCE------EEEcC------cccCccCcccCEEEE-ECCc
Confidence            3457899999999999987 89999999999999999986211      02222      678899999888888 4665


Q ss_pred             -EEEEEcCcCCC
Q psy14967        145 -LTITAPKRVST  155 (168)
Q Consensus       145 -L~I~~PK~~~~  155 (168)
                       |.|.|.|....
T Consensus        73 ~l~I~L~K~~~~   84 (93)
T cd06494          73 LIRIVLTKSNRD   84 (93)
T ss_pred             EEEEEEEeCCCC
Confidence             89999997643

Little is known about the function of the proteins in this subgroup.

>PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional

Probab=96.66  E-value=0.013  Score=49.90  Aligned_cols=80  Identities=10%  Similarity=0.050  Sum_probs=67.0

Q ss_pred             cceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEE
Q psy14967         66 GVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVL  145 (168)
Q Consensus        66 p~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL  145 (168)
                      +..+++.+++.+.|.+.+.|+.++++.|++.++.|.|+.....   +     ..|.-.+.|-..|++++.+...+ .-.+
T Consensus       157 ~r~dWyQs~~~V~i~i~~k~~~~~~~~v~~~~~~l~v~~~~~~---~-----~~y~~~~~L~~~I~p~~s~~~v~-~~Ki  227 (356)
T PLN03088        157 YRHEFYQKPEEVVVTVFAKGVPAENVNVDFGEQILSVVIEVPG---E-----DAYHLQPRLFGKIIPDKCKYEVL-STKI  227 (356)
T ss_pred             cccceeecCCEEEEEEEecCCChHHcEEEeecCEEEEEEecCC---C-----cceeecccccccccccccEEEEe-cceE
Confidence            4578999999999999999999999999999999999875321   1     23555679999999999999985 6699


Q ss_pred             EEEEcCcCC
Q psy14967        146 TITAPKRVS  154 (168)
Q Consensus       146 ~I~~PK~~~  154 (168)
                      .|+|.|.++
T Consensus       228 ei~l~K~~~  236 (356)
T PLN03088        228 EIRLAKAEP  236 (356)
T ss_pred             EEEEecCCC
Confidence            999988763

>PF00525 Crystallin: Alpha crystallin A chain, N terminal; InterPro: IPR003090 The crystallins are water-soluble structural proteins that occur in high concentration in the cytoplasm of eye lens fibre cells

Probab=96.64  E-value=0.00045  Score=43.86  Aligned_cols=34  Identities=44%  Similarity=0.753  Sum_probs=26.1

Q ss_pred             cCCCcCcCccCCCCChhhhhhcCCCCCccccccch
Q psy14967          5 PLLFRDWWDDFDRPSRLLDQHFGLGLRRDDLLSNW   39 (168)
Q Consensus         5 P~~~~~~~~~~~~~~r~~d~~f~~~~~~~d~~~~~   39 (168)
                      ||+.|++|. +..+.|.+|+.||+++...|++...
T Consensus         8 Pw~rR~~~~-~~~PsRiFDQ~FGEgL~d~DLf~~~   41 (59)
T PF00525_consen    8 PWFRRPLWP-FFFPSRIFDQNFGEGLFDSDLFPSS   41 (59)
T ss_dssp             HHHHGGGSS-SS-SCHHHCTTSEESSTTTT---BT
T ss_pred             ccccccccc-ccCchhhHHHhhccccCHhhhcccc
Confidence            677777777 8899999999999999999998765

Four major groups of crystallin have been distinguished on the basis of size, charge and immunological properties: alpha-, beta- and gamma-crystallins occur in all vertebrate classes (though gamma-crystallins are low or absent in avian lenses); and delta-crystallin is found exclusively in reptiles and birds [, ]. Alpha-crystallin occurs as large aggregates, comprising two types of related subunits (A and B) that are highly similar to the small (15-30kDa) heat shock proteins (HSPs), particularly in their C-terminal halves. The relationship between these families is one of classic gene duplication and divergence, from the small HSP family, allowing adaptation to novel functions. Divergence probably occurred prior to evolution of the eye lens, alpha-crystallin being found in small amounts in tissues outside the lens []. Alpha-crystallin has chaperone-like properties including the ability to prevent the precipitation of denatured proteins and to increase cellular tolerance to stress []. It has been suggested that these functions are important for the maintenance of lens transparency and the prevention of cataracts. This is supported by the observation that alpha-crystallin mutations show an association with cataract formation. This entry represents the N-terminal domain of alpha-crystallin. It is not necessary for dimerisation or chaperone activity, but appears to be required for the formation of higher order aggregates [, ].; GO: 0005212 structural constituent of eye lens; PDB: 2YGD_P.

>cd06490 p23_NCB5OR p23_like domain found in NAD(P)H cytochrome b5 (NCB5) oxidoreductase (OR) and similar proteins

Probab=96.52  E-value=0.069  Score=36.44  Aligned_cols=77  Identities=10%  Similarity=0.160  Sum_probs=56.7

Q ss_pred             eeEeCCCeEEEEEeCCC--CCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeC-CCCEE
Q psy14967         69 NITNEENKVQVILDVQQ--FSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLS-SDGVL  145 (168)
Q Consensus        69 di~e~~~~~~v~~~lpG--~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~-~~GiL  145 (168)
                      |++.+++.+.|.+...+  ...+++.+....+.|.|+-...    +     ..|...+.|=..|+++. +..+. .-|.+
T Consensus         2 DWyQt~~~Vtitiy~K~~~~~~~~v~v~~~~~~l~v~~~~~----~-----~~~~~~~~L~~~I~~~~-~~~~~~~~~KV   71 (87)
T cd06490           2 DWFQTDSEVTIVVYTKSKGNPADIVIVDDQQRELRVEIILG----D-----KSYLLHLDLSNEVQWPC-EVRISTETGKI   71 (87)
T ss_pred             CceECCCEEEEEEEEcccCCCCccEEEECCCCEEEEEEECC----C-----ceEEEeeeccccCCCCc-EEEEcccCceE
Confidence            67899999999999885  4555566666677898876432    1     24677778988998775 55542 26899


Q ss_pred             EEEEcCcCCC
Q psy14967        146 TITAPKRVST  155 (168)
Q Consensus       146 ~I~~PK~~~~  155 (168)
                      .|++.|+++.
T Consensus        72 EI~L~K~e~~   81 (87)
T cd06490          72 ELVLKKKEPE   81 (87)
T ss_pred             EEEEEcCCCC
Confidence            9999998754

NCB5OR is widely expressed in human organs and tissues and is localized in the ER (endoplasmic reticulum). It appears to play a critical role in maintaining viable pancreatic beta cells. Mice homozygous for a targeted knockout (KO) of the gene encoding NCB5OR develop an early-onset nonautoimmune diabetes phenotype with a non-inflammatory beta-cell deficiency. The role of NCB5OR in beta cells may be in maintaining or regulating their redox status. Proteins in this group in addition contain an N-terminal cytochrome b5 domain and a C-terminal cytochrome b5 oxidoreductase domain. The gene encoding NCB5OR has been considered as a positional candidate for type II diabetes and other diabetes subtypes related to B-cell dysfunction, however variation in its coding region does not appear not to be a major contributor to the pathogenesis of these diseases.

>KOG1309|consensus

Probab=95.50  E-value=0.055  Score=42.08  Aligned_cols=78  Identities=10%  Similarity=0.114  Sum_probs=57.1

Q ss_pred             cceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEE
Q psy14967         66 GVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVL  145 (168)
Q Consensus        66 p~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL  145 (168)
                      .+.|.+++...++|.+..+|+..+|+.|.+.++.|.|..+-...        ..|.-...|-..|.+++.+-... ---+
T Consensus         4 ~r~DwyQt~~~vvIti~~k~v~~~~v~v~~s~~~l~~~~~~~~g--------~~~~l~~~L~~~I~pe~~s~k~~-stKV   74 (196)
T KOG1309|consen    4 IRHDWYQTETSVVITIFAKNVPKEDVNVEISENTLSIVIQLPSG--------SEYNLQLKLYHEIIPEKSSFKVF-STKV   74 (196)
T ss_pred             ccceeecCCceEEEEEEecCCCccceeEEeecceEEEEEecCCc--------hhhhhhHHhcccccccceeeEee-eeeE
Confidence            45699999999999999999999999999999999888764421        12333334556666666655552 5567


Q ss_pred             EEEEcCc
Q psy14967        146 TITAPKR  152 (168)
Q Consensus       146 ~I~~PK~  152 (168)
                      .|+|+|.
T Consensus        75 EI~L~K~   81 (196)
T KOG1309|consen   75 EITLAKA   81 (196)
T ss_pred             EEEeccc
Confidence            7777764

>cd06492 p23_mNUDC_like p23-like NUD (nuclear distribution) C-like domain of mammalian(m) NUDC and similar proteins

Probab=95.20  E-value=0.23  Score=33.85  Aligned_cols=72  Identities=18%  Similarity=0.246  Sum_probs=54.1

Q ss_pred             EeCCCeEEEEEeCC-C--CCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCC-EEE
Q psy14967         71 TNEENKVQVILDVQ-Q--FSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDG-VLT  146 (168)
Q Consensus        71 ~e~~~~~~v~~~lp-G--~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~G-iL~  146 (168)
                      ..+.+++.|++.+| |  .++.|++|++..+.|.|.-+.+.     -+..+      .|...|+++.-.=++ ++| .|.
T Consensus         4 ~QT~~ev~v~v~l~~~~~~~~kdv~v~i~~~~l~v~~~g~~-----~~i~G------~L~~~V~~des~Wtl-ed~~~l~   71 (87)
T cd06492           4 TQTLSEVELKVPFKVSFRLKGKDVVVDIQRKHLKVGLKGQP-----PIIDG------ELYNEVKVEESSWLI-EDGKVVT   71 (87)
T ss_pred             EeecCEEEEEEECCCCCCccceEEEEEEecCEEEEEECCCc-----eEEeC------cccCcccccccEEEE-eCCCEEE
Confidence            45677889999986 3  89999999999999999653211     12222      567888988777778 676 899


Q ss_pred             EEEcCcCC
Q psy14967        147 ITAPKRVS  154 (168)
Q Consensus       147 I~~PK~~~  154 (168)
                      |+|-|...
T Consensus        72 i~L~K~~~   79 (87)
T cd06492          72 VNLEKINK   79 (87)
T ss_pred             EEEEECCC
Confidence            99998753

Mammalian(m) NUDC associates both with the dynein complex and also with an anti-inflammatory enzyme, platelet activating factor acetylhydrolase I, PAF-AH(I) complex, through binding mNUDF, the regulatory beta subunit of PAF-AH(I). mNUDC is important for cell proliferation both in normal and tumor tissues. Its expression is elevated in various cell types undergoing mitosis or stimulated to proliferate, with high expression levels observed in leukemic cells and tumors. For a leukemic cell line, human NUDC was shown to activate the thrombopoietin (TPO) receptor (Mpl) by binding to its extracellular domain, and promoting cell proliferation and differentiation.

>cd06495 p23_NUDCD3_like p23-like NUD (nuclear distribution) C-like domain found in human NUDC domain-containing protein 3 (NUDCD3) and similar proteins

Probab=93.41  E-value=1.3  Score=31.17  Aligned_cols=77  Identities=16%  Similarity=0.177  Sum_probs=57.6

Q ss_pred             eeeEeCCCeEEEEEeCC-C-CCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCE-
Q psy14967         68 SNITNEENKVQVILDVQ-Q-FSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGV-  144 (168)
Q Consensus        68 ~di~e~~~~~~v~~~lp-G-~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~Gi-  144 (168)
                      -....+.+.+.|++.+| | .+..|+.|++..+.|.|.-+....  +.-+..+      .|...|+.+.-.=++ ++|- 
T Consensus         7 Y~WtQTl~eV~V~i~lp~~~~~~kdv~v~i~~~~l~v~~~~~~~--~~~~i~G------~L~~~V~~des~Wtl-ed~~~   77 (102)
T cd06495           7 YTWSQDYTDVEVRVPVPKDVVKGRQVSVDLQSSSIRVSVRDGGG--EKVLMEG------EFTHKINTENSLWSL-EPGKC   77 (102)
T ss_pred             eEEEeECCeEEEEEECCCCCccceEEEEEEEcCEEEEEEecCCC--CceEEeC------cccCcccCccceEEE-eCCCE
Confidence            46788999999999999 5 468999999999999998752100  0112333      577888888777778 6765 


Q ss_pred             EEEEEcCcC
Q psy14967        145 LTITAPKRV  153 (168)
Q Consensus       145 L~I~~PK~~  153 (168)
                      |.|+|-|..
T Consensus        78 l~I~L~K~~   86 (102)
T cd06495          78 VLLSLSKCS   86 (102)
T ss_pred             EEEEEEECC
Confidence            899999874

Little is known about the function of the proteins in this subgroup.

>KOG3158|consensus

Probab=87.53  E-value=3.1  Score=32.27  Aligned_cols=79  Identities=8%  Similarity=0.114  Sum_probs=59.7

Q ss_pred             cceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEE
Q psy14967         66 GVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVL  145 (168)
Q Consensus        66 p~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL  145 (168)
                      |.+-+.+..+-+.+++.|+.  ..+..|.++..+|+++|+-..  +.     ..+.-.|.|=..||+++.+-+-+  +.+
T Consensus         8 p~v~Waqr~~~vyltv~Ved--~~d~~v~~e~~~l~fs~k~~~--d~-----~~~~~~ief~~eIdpe~sk~k~~--~r~   76 (180)
T KOG3158|consen    8 PEVKWAQRRDLVYLTVCVED--AKDVHVNLEPSKLTFSCKSGA--DN-----HKYENEIEFFDEIDPEKSKHKRT--SRS   76 (180)
T ss_pred             CcchhhhhcCeEEEEEEecc--CccceeeccccEEEEEeccCC--Cc-----eeeEEeeehhhhcCHhhcccccc--ceE
Confidence            55777888899999999985  567778888889999997431  11     25677789999999999888763  666


Q ss_pred             EEEEcCcCCC
Q psy14967        146 TITAPKRVST  155 (168)
Q Consensus       146 ~I~~PK~~~~  155 (168)
                      ...++++...
T Consensus        77 if~i~~K~e~   86 (180)
T KOG3158|consen   77 IFCILRKKEL   86 (180)
T ss_pred             EEEEEEcccc
Confidence            6666665544

>KOG1667|consensus

Probab=85.11  E-value=5.2  Score=32.98  Aligned_cols=84  Identities=13%  Similarity=0.095  Sum_probs=71.2

Q ss_pred             ceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEE
Q psy14967         67 VSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLT  146 (168)
Q Consensus        67 ~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~  146 (168)
                      +-|+..++..+.|.+...|.-|+.-.|+..+-.|.|+-....  +     .++|.-.+.|=.-|+.++.++.+. .--..
T Consensus       216 R~Dwhqt~~~Vti~VY~k~~lpe~s~iean~~~l~V~ivf~~--g-----na~fd~d~kLwgvvnve~s~v~m~-~tkVE  287 (320)
T KOG1667|consen  216 RHDWHQTNGFVTINVYAKGALPETSNIEANGTTLHVSIVFGF--G-----NASFDLDYKLWGVVNVEESSVVMG-ETKVE  287 (320)
T ss_pred             hhhhhhcCCeEEEEEEeccCCcccceeeeCCeEEEEEEEecC--C-----CceeeccceeeeeechhhceEEee-cceEE
Confidence            357899999999999999999999999999999888866531  1     258888899999999999999995 89999


Q ss_pred             EEEcCcCCCCCe
Q psy14967        147 ITAPKRVSTRFY  158 (168)
Q Consensus       147 I~~PK~~~~~~~  158 (168)
                      |+|+|+++..=.
T Consensus       288 Isl~k~ep~sWa  299 (320)
T KOG1667|consen  288 ISLKKAEPGSWA  299 (320)
T ss_pred             EEEeccCCCCcc
Confidence            999999876543

>PF14913 DPCD: DPCD protein family

Probab=83.73  E-value=10  Score=29.84  Aligned_cols=76  Identities=12%  Similarity=0.227  Sum_probs=58.3

Q ss_pred             CCcceeeEeCCCeEEEEE-eCCCCCCCceEEEEEC--CEEEEEEEEecccCCCceEEEEEEEEEECCcC------cccCC
Q psy14967         64 NSGVSNITNEENKVQVIL-DVQQFSPNEISIKTVD--GFILVEGKHEEKEDEHGFISRQFKRRYLLPKD------VEIEK  134 (168)
Q Consensus        64 ~~p~~di~e~~~~~~v~~-~lpG~~~edi~V~v~~--~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~------vd~~~  134 (168)
                      .+|..--.++...|+.++ +||. ..+--+|++++  +.++|+-.           ...|.++|.+|+-      .+.+.
T Consensus        85 ~nP~~~r~dTk~~fqWRIRNLPY-P~dvYsVtvd~~~r~ivvRTt-----------NKKYyKk~~IPDl~R~~l~l~~~~  152 (194)
T PF14913_consen   85 SNPIFVRRDTKTSFQWRIRNLPY-PKDVYSVTVDEDERCIVVRTT-----------NKKYYKKFSIPDLDRCGLPLEQSA  152 (194)
T ss_pred             CCCEEEEEcCccceEEEEccCCC-CccceEEEEcCCCcEEEEECc-----------CccceeEecCCcHHhhCCCcchhh
Confidence            356666788888999988 8886 77878888874  56888743           1478888999963      36778


Q ss_pred             cEEEeCCCCEEEEEEcCc
Q psy14967        135 VTSSLSSDGVLTITAPKR  152 (168)
Q Consensus       135 i~A~~~~~GiL~I~~PK~  152 (168)
                      ++... .|..|.|+-.|.
T Consensus       153 ls~~h-~nNTLIIsYkKP  169 (194)
T PF14913_consen  153 LSFAH-QNNTLIISYKKP  169 (194)
T ss_pred             ceeee-ecCeEEEEecCc
Confidence            88888 699999998764

>PF13349 DUF4097: Domain of unknown function (DUF4097)

Probab=82.64  E-value=17  Score=26.72  Aligned_cols=79  Identities=23%  Similarity=0.325  Sum_probs=50.4

Q ss_pred             cceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCce--E--EEEEEEEEECCcCcccCCcEEEeCC
Q psy14967         66 GVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGF--I--SRQFKRRYLLPKDVEIEKVTSSLSS  141 (168)
Q Consensus        66 p~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~--~--~r~F~r~~~LP~~vd~~~i~A~~~~  141 (168)
                      ..+.|...++ ..+++..   ..+.++++.+++.|.|+.+....--..++  .  ...-.-.+.||++...++++... .
T Consensus        66 ~~V~I~~~~~-~~i~v~~---~~k~~~~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~i~I~lP~~~~l~~i~i~~-~  140 (166)
T PF13349_consen   66 GDVEIKPSDD-DKIKVEY---NGKKPEISVEGGTLTIKSKDRESFFFKGFNFNNSDNKSKITIYLPKDYKLDKIDIKT-S  140 (166)
T ss_pred             eeEEEEEcCC-ccEEEEE---cCcEEEEEEcCCEEEEEEecccccccceEEEcccCCCcEEEEEECCCCceeEEEEEe-c
Confidence            4456665444 3344444   21268999999999999872211001122  1  12356678999999888999998 5


Q ss_pred             CCEEEEEE
Q psy14967        142 DGVLTITA  149 (168)
Q Consensus       142 ~GiL~I~~  149 (168)
                      +|-++|.=
T Consensus       141 ~G~i~i~~  148 (166)
T PF13349_consen  141 SGDITIED  148 (166)
T ss_pred             cccEEEEc
Confidence            99998764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	168
2klr_A	175	Solid-State Nmr Structure Of The Alpha-Crystallin D		3e-19
3n3e_A	106	Zebrafish Alphaa Crystallin Length = 106		5e-15
3l1e_A	106	Bovine Alphaa Crystallin Zinc Bound Length = 106		3e-13
2wj7_A	94	Human Alphab Crystallin Length = 94		5e-13
3l1g_A	96	Human Alphab Crystallin Length = 96		1e-12
2y1y_A	90	Human Alphab Crystallin Acd(Residues 71-157) Length		3e-12
2y22_A	94	Human Alphab-Crystallin Domain (Residues 67-157) Le		3e-12
2wj5_A	101	Rat Alpha Crystallin Domain Length = 101		5e-12
2y1z_A	94	Human Alphab Crystallin Acd R120g Length = 94		6e-12
3l1f_A	103	Bovine Alphaa Crystallin Length = 103		8e-12
3q9p_A	85	Hspb1 Fragment Length = 85		1e-11

>pdb|2KLR|A Chain A, Solid-State Nmr Structure Of The Alpha-Crystallin Domain In Alphab- Crystallin Oligomers Length = 175

Iteration: 1
 Score = 91.3 bits (225), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 78/141 (55%), Gaps = 10/141 (7%)
Query: 15  FDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRP---WRSLARSNSGVSNIT 71
           F  PSRL DQ FG  L   DL    +SL+         YLRP    R+ +  ++G+S + 
Sbjct: 17  FHSPSRLFDQFFGEHLLESDLFPTSTSLS-------PFYLRPPSFLRAPSWFDTGLSEMR 69
Query: 72  NEENKVQVILDVQQFSPNEISIKTVDGFILVXXXXXXXXXXXXFISRQFKRRYLLPKDVE 131
            E+++  V LDV+ FSP E+ +K +   I V            FISR+F R+Y +P DV+
Sbjct: 70  LEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVD 129
Query: 132 IEKVTSSLSSDGVLTITAPKR 152
              +TSSLSSDGVLT+  P++
Sbjct: 130 PLTITSSLSSDGVLTVNGPRK 150

>pdb|3N3E|A Chain A, Zebrafish Alphaa Crystallin Length = 106

Iteration: 1
 Score = 77.0 bits (188), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 53/86 (61%)
Query: 66  GVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVXXXXXXXXXXXXFISRQFKRRYL 125
           GVS + ++  K  V LDV+ FSP+E+S+K  D ++ +            +ISR+F RRY 
Sbjct: 1   GVSEVRSDREKFTVYLDVKHFSPDELSVKVTDDYVEIQGKHGERQDDHGYISREFHRRYR 60
Query: 126 LPKDVEIEKVTSSLSSDGVLTITAPK 151
           LP +V+   +T +LS+DG+LT+  PK
Sbjct: 61  LPSNVDQSAITCTLSADGLLTLCGPK 86

>pdb|3L1E|A Chain A, Bovine Alphaa Crystallin Zinc Bound Length = 106

Iteration: 1
 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 54/88 (61%)
Query: 64  NSGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVXXXXXXXXXXXXFISRQFKRR 123
            SG+S + ++ +K  + LDV+ FSP ++++K  + F+ +            +ISR+F RR
Sbjct: 1   GSGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRR 60
Query: 124 YLLPKDVEIEKVTSSLSSDGVLTITAPK 151
           Y LP +V+   ++ SLS+DG+LT + PK
Sbjct: 61  YRLPSNVDQSALSCSLSADGMLTFSGPK 88

>pdb|2WJ7|A Chain A, Human Alphab Crystallin Length = 94

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 51/87 (58%)
Query: 66  GVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVXXXXXXXXXXXXFISRQFKRRYL 125
           G   +  E+++  V LDV+ FSP E+ +K +   I V            FISR+F R+Y 
Sbjct: 1   GAMEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYR 60
Query: 126 LPKDVEIEKVTSSLSSDGVLTITAPKR 152
           +P DV+   +TSSLSSDGVLT+  P++
Sbjct: 61  IPADVDPLTITSSLSSDGVLTVNGPRK 87

>pdb|3L1G|A Chain A, Human Alphab Crystallin Length = 96

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 73  EENKVQVILDVQQFSPNEISIKTVDGFILVXXXXXXXXXXXXFISRQFKRRYLLPKDVEI 132
           E+++  V LDV+ FSP E+ +K +   I V            FISR+F R+Y +P DV+ 
Sbjct: 5   EKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDP 64
Query: 133 EKVTSSLSSDGVLTITAPKR 152
             +TSSLSSDGVLT+  P++
Sbjct: 65  LTITSSLSSDGVLTVNGPRK 84

>pdb|2Y1Y|A Chain A, Human Alphab Crystallin Acd(Residues 71-157) Length = 90

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 48/80 (60%)
Query: 73  EENKVQVILDVQQFSPNEISIKTVDGFILVXXXXXXXXXXXXFISRQFKRRYLLPKDVEI 132
           E+++  V LDV+ FSP E+ +K +   I V            FISR+F R+Y +P DV+ 
Sbjct: 4   EKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDP 63
Query: 133 EKVTSSLSSDGVLTITAPKR 152
             +TSS SSDGVLT+  P++
Sbjct: 64  LTITSSXSSDGVLTVNGPRK 83

>pdb|2Y22|A Chain A, Human Alphab-Crystallin Domain (Residues 67-157) Length = 94

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 48/80 (60%)
Query: 73  EENKVQVILDVQQFSPNEISIKTVDGFILVXXXXXXXXXXXXFISRQFKRRYLLPKDVEI 132
           E+++  V LDV+ FSP E+ +K +   I V            FISR+F R+Y +P DV+ 
Sbjct: 8   EKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDP 67
Query: 133 EKVTSSLSSDGVLTITAPKR 152
             +TSS SSDGVLT+  P++
Sbjct: 68  LTITSSXSSDGVLTVNGPRK 87

>pdb|2WJ5|A Chain A, Rat Alpha Crystallin Domain Length = 101

Iteration: 1
 Score = 67.0 bits (162), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 47/84 (55%)
Query: 66  GVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVXXXXXXXXXXXXFISRQFKRRYL 125
            ++ +  +     V+LDV+ FSP EIS+K V   + V            FI+R+F RRY 
Sbjct: 2   AMAQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYR 61
Query: 126 LPKDVEIEKVTSSLSSDGVLTITA 149
           LP  V+   VTS+LS +GVL+I A
Sbjct: 62  LPPGVDPAAVTSALSPEGVLSIQA 85

>pdb|2Y1Z|A Chain A, Human Alphab Crystallin Acd R120g Length = 94

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 50/87 (57%)
Query: 66  GVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVXXXXXXXXXXXXFISRQFKRRYL 125
           G   +  E+++  V LDV+ FSP E+ +K +   I V            FISR+F  +Y 
Sbjct: 1   GAMEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHGKYR 60
Query: 126 LPKDVEIEKVTSSLSSDGVLTITAPKR 152
           +P DV+   +TSS+SSDGVLT+  P++
Sbjct: 61  IPADVDPLTITSSMSSDGVLTVNGPRK 87

>pdb|3L1F|A Chain A, Bovine Alphaa Crystallin Length = 103

Iteration: 1
 Score = 66.2 bits (160), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 51/84 (60%)
Query: 68  SNITNEENKVQVILDVQQFSPNEISIKTVDGFILVXXXXXXXXXXXXFISRQFKRRYLLP 127
           S + ++ +K  + LDV+ FSP ++++K  + F+ +            +ISR+F RRY LP
Sbjct: 2   SEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLP 61
Query: 128 KDVEIEKVTSSLSSDGVLTITAPK 151
            +V+   ++ SLS+DG+LT + PK
Sbjct: 62  SNVDQSALSCSLSADGMLTFSGPK 85

>pdb|3Q9P|A Chain A, Hspb1 Fragment Length = 85

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 78  QVILDVQQFSPNEISIKTVDGFILVXXXXXXXXXXXXFISRQFKRRYLLPKDVEIEKVTS 137
           +V LDV  F+P+E+++KT DG + +            +ISR F R+Y LP  V+  +V+S
Sbjct: 10  RVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSS 69
Query: 138 SLSSDGVLTITAP 150
           SLS +G LT+ AP
Sbjct: 70  SLSPEGTLTVEAP 82

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	168
2klr_A	175	Alpha-crystallin B chain; protein, dimer, oligomer	4e-56
2wj5_A	101	Heat shock protein beta-6; chaperone, disulfide bo	1e-40
3l1e_A	106	Alpha-crystallin A chain; lens transparency, polyd	3e-39
3q9p_A	85	Heat shock protein beta-1; alpha-crystallin domain	5e-39
2y1y_A	90	Alpha-crystallin B chain,; small heat shock protei	4e-37
2bol_A	314	TSP36, small heat shock protein; A-crystallin, mol	1e-31
2bol_A	314	TSP36, small heat shock protein; A-crystallin, mol	8e-22
1gme_A	151	Heat shock protein 16.9B; small heat shock protein	1e-13
4eld_A	161	MJ16.5-P1, small heat shock protein HSP16.5; chape	4e-13
3gla_A	100	Low molecular weight heat shock protein; HSPA, SHP	8e-12
3aab_A	123	Putative uncharacterized protein ST1653; alpha-cry	2e-08

>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A Length = 175

 Score =  173 bits (439), Expect = 4e-56
 Identities = 65/155 (41%), Positives = 94/155 (60%), Gaps = 10/155 (6%)

Query: 1   MSLVPLLFRDWWDDFDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRPW--- 57
           +++     R  +  F  PSRL DQ FG  L   DL    +SL+         YLRP    
Sbjct: 3   IAIHHPWIRRPFFPFHSPSRLFDQFFGEHLLESDLFPTSTSLS-------PFYLRPPSFL 55

Query: 58  RSLARSNSGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFIS 117
           R+ +  ++G+S +  E+++  V LDV+ FSP E+ +K +   I V GKHEE++DEHGFIS
Sbjct: 56  RAPSWFDTGLSEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFIS 115

Query: 118 RQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKR 152
           R+F R+Y +P DV+   +TSSLSSDGVLT+  P++
Sbjct: 116 REFHRKYRIPADVDPLTITSSLSSDGVLTVNGPRK 150

>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus} Length = 101

 Score =  131 bits (331), Expect = 1e-40
 Identities = 40/91 (43%), Positives = 57/91 (62%)

Query: 66  GVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYL 125
            ++ +  +     V+LDV+ FSP EIS+K V   + V  +HEE+ DEHGFI+R+F RRY 
Sbjct: 2   AMAQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYR 61

Query: 126 LPKDVEIEKVTSSLSSDGVLTITAPKRVSTR 156
           LP  V+   VTS+LS +GVL+I A    +  
Sbjct: 62  LPPGVDPAAVTSALSPEGVLSIQATPASAQA 92

>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A Length = 106

 Score =  128 bits (322), Expect = 3e-39
 Identities = 38/87 (43%), Positives = 64/87 (73%)

Query: 65  SGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRY 124
           SG+S + ++ +K  + LDV+ FSP ++++K  + F+ + GKH E++D+HG+ISR+F RRY
Sbjct: 2   SGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRY 61

Query: 125 LLPKDVEIEKVTSSLSSDGVLTITAPK 151
            LP +V+   ++ SLS+DG+LT + PK
Sbjct: 62  RLPSNVDQSALSCSLSADGMLTFSGPK 88

>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A Length = 85

 Score =  126 bits (319), Expect = 5e-39
 Identities = 37/81 (45%), Positives = 58/81 (71%)

Query: 71  TNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDV 130
           ++  ++ +V LDV  F+P+E+++KT DG + + GKH  ++DEHG+ISR F R+Y LP  V
Sbjct: 3   SHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGV 62

Query: 131 EIEKVTSSLSSDGVLTITAPK 151
           +  +V+SSLS +G LT+ AP 
Sbjct: 63  DPTQVSSSLSPEGTLTVEAPM 83

>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A Length = 90

 Score =  122 bits (307), Expect = 4e-37
 Identities = 42/82 (51%), Positives = 60/82 (73%)

Query: 71  TNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDV 130
             E+++  V LDV+ FSP E+ +K +   I V GKHEE++DEHGFISR+F R+Y +P DV
Sbjct: 2   AMEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADV 61

Query: 131 EIEKVTSSLSSDGVLTITAPKR 152
           +   +TSS+SSDGVLT+  P++
Sbjct: 62  DPLTITSSMSSDGVLTVNGPRK 83

>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata} Length = 314

 Score =  114 bits (286), Expect = 1e-31
 Identities = 31/171 (18%), Positives = 52/171 (30%), Gaps = 12/171 (7%)

Query: 1   MSLVPLL---------FRDWWDDFDRPSRLLDQHFGLGLRRD--DLLSNWSSLAQSARPI 49
           M+LVPL           +   DD     R L          +  + +    S  Q     
Sbjct: 27  MALVPLDQVFDWAERSRQSLHDDIVNMHRNLFSLEPFTAMDNAFESVMKEMSAIQPREFH 86

Query: 50  GAGYLRPWRSLARSNSGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEK 109
                     L           +     +V  +V+ F   EI+IK     ++V  +    
Sbjct: 87  PELEYTQPGELDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVA 146

Query: 110 EDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRVSTRFYFF 160
                 +S    R   LP  V+   + +++++D VL I AP          
Sbjct: 147 -CGDAAMSESVGRSIPLPPSVDRNHIQATITTDDVLVIEAPVNEPNYKAIK 196

>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata} Length = 314

 Score = 88.7 bits (219), Expect = 8e-22
 Identities = 17/100 (17%), Positives = 39/100 (39%), Gaps = 4/100 (4%)

Query: 55  RPWRSLARSNSGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEG---KHEEKED 111
           +           V+     +     +     F+P ++ +      + V G   K E+ E+
Sbjct: 214 QLAVKNKEGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTEN 273

Query: 112 EHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPK 151
                 R+F + ++ P+ V+  K  + +  DG++ + AP 
Sbjct: 274 ASHSEHREFYKAFVTPEVVDASKTQAEI-VDGLMVVEAPL 312

>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A Length = 151

 Score = 63.5 bits (155), Expect = 1e-13
 Identities = 31/160 (19%), Positives = 58/160 (36%), Gaps = 31/160 (19%)

Query: 1   MSLVPLLFRDWWDDFDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRPWRSL 60
           MS+V     + +D F          F   +       + ++   +AR             
Sbjct: 1   MSIVR--RSNVFDPFADLWADPFDTFRSIVPAISGGGSETAAFANAR------------- 45

Query: 61  ARSNSGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILV---EGKHEEKEDEHGFIS 117
                   +            D+      E+ ++  DG +LV   E   E+++    +  
Sbjct: 46  -------MDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHR 98

Query: 118 R-----QFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKR 152
                 +F RR+ L +D ++E+V + L  +GVLT+T PK 
Sbjct: 99  VERSSGKFVRRFRLLEDAKVEEVKAGLE-NGVLTVTVPKA 137

>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A Length = 161

 Score = 62.4 bits (152), Expect = 4e-13
 Identities = 24/150 (16%), Positives = 53/150 (35%), Gaps = 12/150 (8%)

Query: 12  WDDFDRP-SRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRPWRSLARSNSGVSNI 70
            D FD    R+  + F   +    ++ + + L  +A    A  +     ++       +I
Sbjct: 4   RDPFDSLFERMFKEFFATPMTGTTMIQSSTPLPPAAIESPA--VAAGIQISGKGFMPISI 61

Query: 71  TNEENKVQVILDVQQFSPNEISIKTVDGFILVEG--KHEEKEDEHGFISR------QFKR 122
              +  ++VI  +   +  +I +  V   + +          +    I        +  R
Sbjct: 62  IEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYR 121

Query: 123 RYLLPKDVEIEKVTSSLSSDGVLTITAPKR 152
              LP  V+ E  ++    +GVL++  PK 
Sbjct: 122 TIKLPATVKEENASAKFE-NGVLSVILPKA 150

>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A Length = 100

 Score = 57.5 bits (140), Expect = 8e-12
 Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 8/91 (8%)

Query: 69  NITNEENKVQVILDVQQFSPNEISIKTVDGFILVEG--KHEEKEDEHGFISR-----QFK 121
           +I  E N   +  D+    P++I ++   G + + G  K E   +   F         F 
Sbjct: 8   DIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFH 67

Query: 122 RRYLLPKDVEIEKVTSSLSSDGVLTITAPKR 152
           RR+ LP   + + +T++   +GVL I  PKR
Sbjct: 68  RRFALPDSADADGITAAGR-NGVLEIRIPKR 97

>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A Length = 123

 Score = 49.5 bits (119), Expect = 2e-08
 Identities = 19/107 (17%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 55  RPWRSLARSNSGVS----NITNEENKVQVILDVQQFSPNEISIK-TVDGFILVEGKHEEK 109
           +    L+R    +     ++  E   + V+ D+  F+  +I  + +    +++E + E  
Sbjct: 10  KRSEELSRGFYELVYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREIT 69

Query: 110 EDEHGFISR---QFKRRYLLPKDVEIE-KVTSSLSSDGVLTITAPKR 152
           E    ++++     ++   LP +V  + +++     +GVLTI  P  
Sbjct: 70  EPGVKYLTQRPKYVRKVIRLPYNVAKDAEISGKYE-NGVLTIRIPIA 115

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	168
2klr_A	175	Alpha-crystallin B chain; protein, dimer, oligomer	99.97
3l1e_A	106	Alpha-crystallin A chain; lens transparency, polyd	99.96
4eld_A	161	MJ16.5-P1, small heat shock protein HSP16.5; chape	99.95
2wj5_A	101	Heat shock protein beta-6; chaperone, disulfide bo	99.95
3q9p_A	85	Heat shock protein beta-1; alpha-crystallin domain	99.93
1gme_A	151	Heat shock protein 16.9B; small heat shock protein	99.93
2y1y_A	90	Alpha-crystallin B chain,; small heat shock protei	99.92
3aab_A	123	Putative uncharacterized protein ST1653; alpha-cry	99.92
3gla_A	100	Low molecular weight heat shock protein; HSPA, SHP	99.92
4fei_A	102	Heat shock protein-related protein; stress respons	99.92
2bol_A	314	TSP36, small heat shock protein; A-crystallin, mol	99.86
2bol_A	314	TSP36, small heat shock protein; A-crystallin, mol	99.79
1rl1_A	114	Suppressor of G2 allele of SKP1 homolog; beta sand	99.07
2xcm_C	92	SGT1-like protein, cytosolic heat shock protein 90	99.02
3eud_A	115	Protein SHQ1; CS domain HSP20-like domain SHQ1 H/A	98.14
2k8q_A	134	Protein SHQ1; beta-sandwich, CS domain, nucleus, s	98.06
1x5m_A	127	Calcyclin-binding protein; CS domain, structural g	97.77
1wh0_A	134	Ubiquitin carboxyl-terminal hydrolase 19; USP, CS	97.66
1wgv_A	124	KIAA1068 protein; CS domain, HSP20-like fold, stru	97.64
1ejf_A	125	Progesterone receptor P23; chaperone, CO-chaperone	97.51
3igf_A	374	ALL4481 protein; two-domained protein consisting o	97.4
1wfi_A	131	Nuclear distribution gene C homolog; NUDC, riken s	97.36
2o30_A	131	Nuclear movement protein; MCSG, structural genomic	97.25
3qor_A	121	Nuclear migration protein NUDC; beta-sandwich, cha	97.15
2kmw_A	150	Uncharacterized protein AT3G03773; protein structu	97.14
2rh0_A	157	NUDC domain-containing protein 2; 13542905, nuclea	97.12
2cg9_X	134	CO-chaperone protein SBA1; chaperone complex, HSP9	97.08

>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A

Probab=99.97  E-value=7.1e-32  Score=207.46  Aligned_cols=151  Identities=41%  Similarity=0.646  Sum_probs=78.1

Q ss_pred             cCCCcCcCccCCCCChhhhhhcCCCCCccccccchhccccCCCCCCCCCCCchhhhh----ccCCcceeeEeCCCeEEEE
Q psy14967          5 PLLFRDWWDDFDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRPWRSLA----RSNSGVSNITNEENKVQVI   80 (168)
Q Consensus         5 P~~~~~~~~~~~~~~r~~d~~f~~~~~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~----~~~~p~~di~e~~~~~~v~   80 (168)
                      ||++| +|.++.++.|.||++|+.++...|++..++..        +++++++.++.    ......+||++++++|+|+
T Consensus         8 ~~~~~-~~~~~~~~~rl~d~~fg~~~~~~~l~~~~~~~--------~~~~~~~~~~~r~~~~~~~~~~dv~e~~d~~~v~   78 (175)
T 2klr_A            8 PWIRR-PFFPFHSPSRLFDQFFGEHLLESDLFPTSTSL--------SPFYLRPPSFLRAPSWFDTGLSEMRLEKDRFSVN   78 (175)
T ss_dssp             ----------------------------------------------------------------------CCCCSEEEEE
T ss_pred             CcccC-ccccccCCcchhhhhcCCCCChhhhccccccc--------CccccCchhhccccccccCCceEEEEcCCeEEEE
Confidence            56665 55555568999999999987777665433211        11222211000    1123458999999999999


Q ss_pred             EeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEEEEEcCcCCCC-Cee
Q psy14967         81 LDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRVSTR-FYF  159 (168)
Q Consensus        81 ~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~~PK~~~~~-~~~  159 (168)
                      ++||||++|||+|+++++.|+|+|+++.++++.+|.+++|+|+|.||++||.++|+|+|++||||+|++||+++.+ .++
T Consensus        79 ~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL~I~lPK~~~~~~~r~  158 (175)
T 2klr_A           79 LDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTVNGPRKQVSGPERT  158 (175)
T ss_dssp             ECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSCEEEEEECC--------
T ss_pred             EECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCEEEEEEECCCCCCCCeE
Confidence            9999999999999999999999999887666778999999999999999999999999944999999999987655 478


Q ss_pred             eEEEe
Q psy14967        160 FSLKL  164 (168)
Q Consensus       160 i~i~~  164 (168)
                      |+|+.
T Consensus       159 I~I~~  163 (175)
T 2klr_A          159 IPITR  163 (175)
T ss_dssp             -----
T ss_pred             EEEec
Confidence            88764

>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A

Probab=99.96  E-value=3.3e-28  Score=172.86  Aligned_cols=98  Identities=39%  Similarity=0.771  Sum_probs=89.6

Q ss_pred             cceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEE
Q psy14967         66 GVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVL  145 (168)
Q Consensus        66 p~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL  145 (168)
                      +.++|++++++|.|.++||||+++||+|+++++.|+|+|+++...++.+|.+++|.|+|.||.+||.++|+|+|++||+|
T Consensus         3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~GvL   82 (106)
T 3l1e_A            3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGML   82 (106)
T ss_dssp             CSEEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTSEE
T ss_pred             CceEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEE
Confidence            45899999999999999999999999999999999999998776667789999999999999999999999999449999


Q ss_pred             EEEEcCcCCC-----CCeeeEEE
Q psy14967        146 TITAPKRVST-----RFYFFSLK  163 (168)
Q Consensus       146 ~I~~PK~~~~-----~~~~i~i~  163 (168)
                      +|++||.++.     ++++|+|+
T Consensus        83 ~I~~PK~~~~~~~~~~~r~I~I~  105 (106)
T 3l1e_A           83 TFSGPKIPSGVDAGHSERAIPVS  105 (106)
T ss_dssp             EEEEEBCCCCTTTTSSSCCCCCC
T ss_pred             EEEEEccCcccccCCCCeEeeec
Confidence            9999999876     67777763

>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A

Probab=99.95  E-value=7e-29  Score=188.18  Aligned_cols=149  Identities=17%  Similarity=0.250  Sum_probs=87.0

Q ss_pred             CCCcCcCccCCCCChhhhhhcCCCCCccccccchhccccCCCCCCCCCCCch----hhhhccCCcceeeEeCCCeEEEEE
Q psy14967          6 LLFRDWWDDFDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRPW----RSLARSNSGVSNITNEENKVQVIL   81 (168)
Q Consensus         6 ~~~~~~~~~~~~~~r~~d~~f~~~~~~~d~~~~~~~~~~~~~~~~~~~~~p~----~~~~~~~~p~~di~e~~~~~~v~~   81 (168)
                      ++.||||+++.  .|.|+++|+..++..-.......   .+   .+....|.    ........+++||++++++|+|++
T Consensus         1 ~~~~dPF~~~~--~r~~~~~f~~~~~~~~~~~~~~~---~p---~~~~~~p~~a~~~~~~~~~~~pvdi~e~~~~~~v~~   72 (161)
T 4eld_A            1 MFGRDPFDSLF--ERMFKEFFATPMTGTTMIQSSTP---LP---PAAIESPAVAAGIQISGKGFMPISIIEGDQHIKVIA   72 (161)
T ss_dssp             ----------------------------------------------------CCCCCEEEEESCCCEEEEECSSEEEEEE
T ss_pred             CCCcccchHHH--HHHHHHHhCCCCccccccCCccc---CC---cccccCccccccccccCCcccceeEEEeCCEEEEEE
Confidence            36789999874  57788888765433211110000   00   00000000    000112234499999999999999


Q ss_pred             eCCCCCCCceEEEEECCEEEEEEEEeccc--CCCceE------EEEEEEEEECCcCcccCCcEEEeCCCCEEEEEEcCcC
Q psy14967         82 DVQQFSPNEISIKTVDGFILVEGKHEEKE--DEHGFI------SRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRV  153 (168)
Q Consensus        82 ~lpG~~~edi~V~v~~~~L~I~g~~~~~~--~~~~~~------~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~~PK~~  153 (168)
                      +|||+++|||+|+++++.|+|+|+++...  ++.+|.      .++|+|+|.||.+||.++|+|+| +||+|+|++||++
T Consensus        73 dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A~~-~nGvL~I~lpK~~  151 (161)
T 4eld_A           73 WLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAKF-ENGVLSVILPKAE  151 (161)
T ss_dssp             ECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEEEE-ETTEEEEEEEBCG
T ss_pred             ECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEEEE-ECCEEEEEEEcCC
Confidence            99999999999999999999999987632  223343      24899999999999999999999 5999999999999


Q ss_pred             CCCCeeeEEE
Q psy14967        154 STRFYFFSLK  163 (168)
Q Consensus       154 ~~~~~~i~i~  163 (168)
                      +.++++|+|+
T Consensus       152 ~~~~r~I~Ie  161 (161)
T 4eld_A          152 SSIKKGINIE  161 (161)
T ss_dssp             GGSCCCCCCC
T ss_pred             CCCCcEeecC
Confidence            9999998874

>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}

Probab=99.95  E-value=6.4e-28  Score=169.99  Aligned_cols=98  Identities=41%  Similarity=0.650  Sum_probs=88.5

Q ss_pred             ceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEE
Q psy14967         67 VSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLT  146 (168)
Q Consensus        67 ~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~  146 (168)
                      .+||++++++|.|.++||||+++||+|+++++.|+|+|+++...++.+|.+++|+|+|.||.+||.++|+|+|++||+|+
T Consensus         3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL~   82 (101)
T 2wj5_A            3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVLS   82 (101)
T ss_dssp             CCCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTSEEE
T ss_pred             cEEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCCEEE
Confidence            57999999999999999999999999999999999999987766667788999999999999999999999994499999


Q ss_pred             EEEcCcCCCCCeeeEEEe
Q psy14967        147 ITAPKRVSTRFYFFSLKL  164 (168)
Q Consensus       147 I~~PK~~~~~~~~i~i~~  164 (168)
                      |++||.++.++++++|+.
T Consensus        83 I~lPK~~~~~~~~~~i~~  100 (101)
T 2wj5_A           83 IQATPASAQASLPSPPAA  100 (101)
T ss_dssp             EEECBCCCCCSSCC----
T ss_pred             EEEECCCcCCCCCCcccc
Confidence            999999999999998864

>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A

Probab=99.93  E-value=9.8e-26  Score=154.11  Aligned_cols=84  Identities=44%  Similarity=0.784  Sum_probs=71.8

Q ss_pred             eEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEEEEE
Q psy14967         70 ITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITA  149 (168)
Q Consensus        70 i~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~~  149 (168)
                      +.|++++|.|.++||||+++||+|+++++.|+|+|+++...++.++.+++|.|+|.||++||+++|+|+|++||+|+|++
T Consensus         2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~l   81 (85)
T 3q9p_A            2 GSHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEA   81 (85)
T ss_dssp             -CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEEE
T ss_pred             ccCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEEE
Confidence            46899999999999999999999999999999999988765556778899999999999999999999994499999999


Q ss_pred             cCcC
Q psy14967        150 PKRV  153 (168)
Q Consensus       150 PK~~  153 (168)
                      ||.+
T Consensus        82 PK~k   85 (85)
T 3q9p_A           82 PMPK   85 (85)
T ss_dssp             ECCC
T ss_pred             EcCC
Confidence            9953

>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A

Probab=99.93  E-value=2.2e-25  Score=167.50  Aligned_cols=99  Identities=19%  Similarity=0.363  Sum_probs=84.4

Q ss_pred             CcceeeEeCCCeEEEEEeCCCCCCCceEEEEE-CCEEEEEEEEeccc--CCCceEE-----EEEEEEEECCcCcccCCcE
Q psy14967         65 SGVSNITNEENKVQVILDVQQFSPNEISIKTV-DGFILVEGKHEEKE--DEHGFIS-----RQFKRRYLLPKDVEIEKVT  136 (168)
Q Consensus        65 ~p~~di~e~~~~~~v~~~lpG~~~edi~V~v~-~~~L~I~g~~~~~~--~~~~~~~-----r~F~r~~~LP~~vd~~~i~  136 (168)
                      .|.+||++++++|+|+++|||++++||+|+++ ++.|+|+|+++...  ++..|++     ++|+|+|.||.+||.++|+
T Consensus        43 ~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~  122 (151)
T 1gme_A           43 NARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVK  122 (151)
T ss_dssp             GGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCE
T ss_pred             CCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceE
Confidence            48899999999999999999999999999995 78999999876543  2334543     5799999999999999999


Q ss_pred             EEeCCCCEEEEEEcCcCCCCCeeeEEEe
Q psy14967        137 SSLSSDGVLTITAPKRVSTRFYFFSLKL  164 (168)
Q Consensus       137 A~~~~~GiL~I~~PK~~~~~~~~i~i~~  164 (168)
                      |+| +||+|+|++||.++.+++.+.|+|
T Consensus       123 A~~-~nGvL~I~lPK~~~~~~~~~~I~I  149 (151)
T 1gme_A          123 AGL-ENGVLTVTVPKAEVKKPEVKAIQI  149 (151)
T ss_dssp             EEE-ETTEEEEEEECCCCCTTCCCCCCC
T ss_pred             EEE-ECCEEEEEEEccCcCCCCCeEeee
Confidence            999 699999999999887765544443

>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A

Probab=99.92  E-value=6.4e-25  Score=151.47  Aligned_cols=88  Identities=48%  Similarity=0.804  Sum_probs=73.5

Q ss_pred             EeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEEEEEc
Q psy14967         71 TNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAP  150 (168)
Q Consensus        71 ~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~~P  150 (168)
                      .+++++|.|.++|||++++||+|+++++.|+|+|+++...++.+|.+++|+|+|.||.+||.++|+|+|++||+|+|++|
T Consensus         2 k~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~p   81 (90)
T 2y1y_A            2 AMEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNGP   81 (90)
T ss_dssp             ----CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEEC
T ss_pred             CcCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEEE
Confidence            36789999999999999999999999999999999877666678999999999999999999999999944999999999


Q ss_pred             CcCCCCCe
Q psy14967        151 KRVSTRFY  158 (168)
Q Consensus       151 K~~~~~~~  158 (168)
                      |.++++++
T Consensus        82 K~~~~~p~   89 (90)
T 2y1y_A           82 RKQVSGPE   89 (90)
T ss_dssp             BC------
T ss_pred             cCCCCCCC
Confidence            99888775

>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A

Probab=99.92  E-value=3e-25  Score=161.20  Aligned_cols=89  Identities=19%  Similarity=0.259  Sum_probs=80.7

Q ss_pred             cceeeEeCCCeEEEEEeCCCCCCCceEEEEEC-CEEEEEEEEecccCCCceEEE----EEEEEEECCcCcccCCc-EEEe
Q psy14967         66 GVSNITNEENKVQVILDVQQFSPNEISIKTVD-GFILVEGKHEEKEDEHGFISR----QFKRRYLLPKDVEIEKV-TSSL  139 (168)
Q Consensus        66 p~~di~e~~~~~~v~~~lpG~~~edi~V~v~~-~~L~I~g~~~~~~~~~~~~~r----~F~r~~~LP~~vd~~~i-~A~~  139 (168)
                      |++||++++++|.|.++|||++++||+|++++ +.|+|+|+++... +.+|..+    +|.|+|.||.+||.++| +|+|
T Consensus        25 P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~-~~~~~~~Er~~~f~R~~~LP~~vd~~~i~~A~~  103 (123)
T 3aab_A           25 PPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITE-PGVKYLTQRPKYVRKVIRLPYNVAKDAEISGKY  103 (123)
T ss_dssp             SCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCC-CSCEEEECSCSEEEEEEECSSEECTTCCCEEEE
T ss_pred             CcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccC-CCeEEEEEEeEEEEEEEECCCCcCcchhCeeEE
Confidence            67999999999999999999999999999999 9999999987654 4456554    89999999999999999 9999


Q ss_pred             CCCCEEEEEEcCcCCCC
Q psy14967        140 SSDGVLTITAPKRVSTR  156 (168)
Q Consensus       140 ~~~GiL~I~~PK~~~~~  156 (168)
                       +||+|+|++||.++.+
T Consensus       104 -~~GvL~I~lPK~~~~~  119 (123)
T 3aab_A          104 -ENGVLTIRIPIAGTSV  119 (123)
T ss_dssp             -ETTEEEEEEEGGGEEC
T ss_pred             -cCCEEEEEEEcCCCCc
Confidence             5999999999987664

>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A

Probab=99.92  E-value=1.4e-24  Score=152.13  Aligned_cols=90  Identities=24%  Similarity=0.493  Sum_probs=77.8

Q ss_pred             CcceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEeccc--CCCceEE-----EEEEEEEECCcCcccCCcEE
Q psy14967         65 SGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKE--DEHGFIS-----RQFKRRYLLPKDVEIEKVTS  137 (168)
Q Consensus        65 ~p~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~--~~~~~~~-----r~F~r~~~LP~~vd~~~i~A  137 (168)
                      .|++||++++++|.|.++|||++++||+|+++++.|+|+|+++...  .+..|.+     ++|+|+|.||.+||.++|+|
T Consensus         4 ~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i~A   83 (100)
T 3gla_A            4 VPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGITA   83 (100)
T ss_dssp             CCCEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSCEE
T ss_pred             cCcEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHHeEE
Confidence            4789999999999999999999999999999999999999987643  2233443     58999999999999999999


Q ss_pred             EeCCCCEEEEEEcCcCCC
Q psy14967        138 SLSSDGVLTITAPKRVST  155 (168)
Q Consensus       138 ~~~~~GiL~I~~PK~~~~  155 (168)
                      +| +||+|+|++||.+++
T Consensus        84 ~~-~~GvL~I~~pK~~~a  100 (100)
T 3gla_A           84 AG-RNGVLEIRIPKRPAA  100 (100)
T ss_dssp             EE-ETTEEEEEEEBC---
T ss_pred             EE-eCCEEEEEEecCCCC
Confidence            99 599999999998753

>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}

Probab=99.92  E-value=2.3e-24  Score=151.79  Aligned_cols=92  Identities=22%  Similarity=0.294  Sum_probs=80.6

Q ss_pred             CcceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccC--CCceEEEEEEEEEECCcCcccCCcEEEeCCC
Q psy14967         65 SGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKED--EHGFISRQFKRRYLLPKDVEIEKVTSSLSSD  142 (168)
Q Consensus        65 ~p~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~--~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~  142 (168)
                      .|++||++++++|.|.++|||++++||+|+++++.|+|+|+++....  ..+...++|.|+|.||.+||.++|+|+| +|
T Consensus         6 ~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~-~~   84 (102)
T 4fei_A            6 TPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVASL-AG   84 (102)
T ss_dssp             CCCEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEE-ET
T ss_pred             cCcEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEEE-EC
Confidence            47899999999999999999999999999999999999999864311  1123567999999999999999999999 59


Q ss_pred             CEEEEEEcCcCCCCC
Q psy14967        143 GVLTITAPKRVSTRF  157 (168)
Q Consensus       143 GiL~I~~PK~~~~~~  157 (168)
                      |+|+|++||++++..
T Consensus        85 GvL~I~lpK~~~~~d   99 (102)
T 4fei_A           85 GVLTVRFEKLRPTID   99 (102)
T ss_dssp             TEEEEEEEBSSCCCC
T ss_pred             CEEEEEEEccCcccc
Confidence            999999999887643

>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}

Probab=99.86  E-value=6.4e-22  Score=164.18  Aligned_cols=96  Identities=21%  Similarity=0.316  Sum_probs=84.4

Q ss_pred             CcceeeEeCCC----eEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeC
Q psy14967         65 SGVSNITNEEN----KVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLS  140 (168)
Q Consensus        65 ~p~~di~e~~~----~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~  140 (168)
                      .|++||+|+++    +|.|+++||||++|||+|+++++.|+|+|+++.+. +.+..+++|.|+|.||++||.++|+|+|+
T Consensus        98 ~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~-e~~r~~g~F~R~~~LP~~Vd~e~i~A~~~  176 (314)
T 2bol_A           98 DFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVAC-GDAAMSESVGRSIPLPPSVDRNHIQATIT  176 (314)
T ss_dssp             GGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSST-TCCCBCCCEEEEEECCTTBCGGGCEEEEC
T ss_pred             CCccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccC-CCCEEEEEEEEEEECCCCccccccEEEEe
Confidence            48899999999    99999999999999999999999999999987543 34577789999999999999999999993


Q ss_pred             CCCEEEEEEcCcCCCCCeeeEE
Q psy14967        141 SDGVLTITAPKRVSTRFYFFSL  162 (168)
Q Consensus       141 ~~GiL~I~~PK~~~~~~~~i~i  162 (168)
                      .||||+|++||.++.. ++|+|
T Consensus       177 ~nGVL~I~lPK~~~~~-~~I~i  197 (314)
T 2bol_A          177 TDDVLVIEAPVNEPNY-KAIKL  197 (314)
T ss_dssp             SSSEEEEEEEBSSCCT-TTEEE
T ss_pred             CCCEEEEEEeccCccc-ceeec
Confidence            3999999999987664 44544

>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}

Probab=99.79  E-value=1.3e-19  Score=150.35  Aligned_cols=87  Identities=22%  Similarity=0.406  Sum_probs=70.3

Q ss_pred             cceeeEeCC---CeEEEEEeC-CCCCCCceEEEEECCEEEEEEEEecccCC---CceEEEEEEEEEECCcCcccCCcEEE
Q psy14967         66 GVSNITNEE---NKVQVILDV-QQFSPNEISIKTVDGFILVEGKHEEKEDE---HGFISRQFKRRYLLPKDVEIEKVTSS  138 (168)
Q Consensus        66 p~~di~e~~---~~~~v~~~l-pG~~~edi~V~v~~~~L~I~g~~~~~~~~---~~~~~r~F~r~~~LP~~vd~~~i~A~  138 (168)
                      ...+|.+++   +.|.|.++| ||++||||+|++++|.|+|+|+++.++++   .++.+++|+|+|.||++||+++|+|+
T Consensus       221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~  300 (314)
T 2bol_A          221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAE  300 (314)
T ss_dssp             CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEEECSSEECGGGCEEE
T ss_pred             CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEE
Confidence            446676655   579999999 99999999999999999999998765432   23456799999999999999999999


Q ss_pred             eCCCCEEEEEEcCcC
Q psy14967        139 LSSDGVLTITAPKRV  153 (168)
Q Consensus       139 ~~~~GiL~I~~PK~~  153 (168)
                      | +||||+|++||.+
T Consensus       301 ~-~dGvL~i~~Pk~~  314 (314)
T 2bol_A          301 I-VDGLMVVEAPLFK  314 (314)
T ss_dssp             E-ETTEEEEEEEEEC
T ss_pred             E-eCCEEEEEEecCC
Confidence            9 5999999999863

>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3

Probab=99.07  E-value=4.4e-10  Score=79.66  Aligned_cols=81  Identities=12%  Similarity=0.101  Sum_probs=72.2

Q ss_pred             CcceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCE
Q psy14967         65 SGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGV  144 (168)
Q Consensus        65 ~p~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~Gi  144 (168)
                      .+..+++++++.+.|++++||+++++++|.+.++.|.|+++..   ++     ..|...+.|+..|++++.++++ .+|.
T Consensus         9 ~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~---~~-----~~y~~~~~L~~~I~~e~s~~~~-~~~~   79 (114)
T 1rl1_A            9 KIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLP---SG-----EDYNLKLELLHPIIPEQSTFKV-LSTK   79 (114)
T ss_dssp             CCCEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECT---TS-----SEEEEEECBSSCCCGGGEEEEE-CSSS
T ss_pred             CCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeC---CC-----cEEEEEeeCCCcCCccccEEEE-ECCE
Confidence            3668999999999999999999999999999999999998743   11     3688899999999999999999 5999


Q ss_pred             EEEEEcCcCC
Q psy14967        145 LTITAPKRVS  154 (168)
Q Consensus       145 L~I~~PK~~~  154 (168)
                      |+|+|+|+++
T Consensus        80 l~i~L~K~~~   89 (114)
T 1rl1_A           80 IEIKLKKPEA   89 (114)
T ss_dssp             EEEEEECSSC
T ss_pred             EEEEEEcCCC
Confidence            9999999864

>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*

Probab=99.02  E-value=6.3e-10  Score=75.66  Aligned_cols=81  Identities=11%  Similarity=0.021  Sum_probs=71.9

Q ss_pred             cceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEE
Q psy14967         66 GVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVL  145 (168)
Q Consensus        66 p~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL  145 (168)
                      +..+++++++.+.|++.+||+.++++.|.+.++.|.|++...   ++     ..|...+.|+..|++++.++++ .+|.|
T Consensus         3 ~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~---~~-----~~y~~~~~L~~~I~~~~s~~~~-~~~~l   73 (92)
T 2xcm_C            3 YRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVP---GE-----DAYYLQPRLFGKIIPDKCKYEV-LSTKI   73 (92)
T ss_dssp             SEEEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCT---TS-----CCEEECCBBSSCBCGGGCEEEE-CSSCE
T ss_pred             ccccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcC---CC-----cEEEEeeEcCCccCchhEEEEE-ECCEE
Confidence            568999999999999999999999999999999999998642   11     3688889999999999999999 59999


Q ss_pred             EEEEcCcCCC
Q psy14967        146 TITAPKRVST  155 (168)
Q Consensus       146 ~I~~PK~~~~  155 (168)
                      .|+|.|+++.
T Consensus        74 ~i~L~K~~~~   83 (92)
T 2xcm_C           74 EICLAKADII   83 (92)
T ss_dssp             EEEEEBSSSC
T ss_pred             EEEEEcCCCC
Confidence            9999998653

>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}

Probab=98.14  E-value=3.2e-05  Score=54.69  Aligned_cols=79  Identities=14%  Similarity=0.235  Sum_probs=67.9

Q ss_pred             CcceeeEeCCCeEEEEEeCCCCC--CCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCc-ccCCcEEEeC-
Q psy14967         65 SGVSNITNEENKVQVILDVQQFS--PNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDV-EIEKVTSSLS-  140 (168)
Q Consensus        65 ~p~~di~e~~~~~~v~~~lpG~~--~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~v-d~~~i~A~~~-  140 (168)
                      .|.-.|..+++.+.|.+.+|.++  ..++++.++++......+             -|.=++.||..+ |.+.-+|+|. 
T Consensus        17 TP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~~-------------PYyLRL~lP~~vved~~~~A~YD~   83 (115)
T 3eud_A           17 TPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS-------------PYYLRLRFPHELIDDERSTAQYDS   83 (115)
T ss_dssp             CCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEET-------------TEEEEEECSSCEECSTTCEEEEET
T ss_pred             CCcEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEecC-------------CeEEEEecCcceecCCCcceEEeC
Confidence            36789999999999999999977  889999999999988763             466679999997 7788899986 


Q ss_pred             CCCEEEEEEcCcCCCC
Q psy14967        141 SDGVLTITAPKRVSTR  156 (168)
Q Consensus       141 ~~GiL~I~~PK~~~~~  156 (168)
                      ++|.++|++||..+.+
T Consensus        84 d~g~~~v~lpK~~~GE   99 (115)
T 3eud_A           84 KDECINVKVAKLNKNE   99 (115)
T ss_dssp             TTTEEEEEEEESSTTC
T ss_pred             CCcEEEEEEcCCcCCC
Confidence            5799999999987653

>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}

Probab=98.06  E-value=4.5e-06  Score=60.80  Aligned_cols=77  Identities=14%  Similarity=0.232  Sum_probs=67.3

Q ss_pred             cceeeEeCCCeEEEEEeCCCCC--CCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCc-ccCCcEEEeC-C
Q psy14967         66 GVSNITNEENKVQVILDVQQFS--PNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDV-EIEKVTSSLS-S  141 (168)
Q Consensus        66 p~~di~e~~~~~~v~~~lpG~~--~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~v-d~~~i~A~~~-~  141 (168)
                      |.-.+..+++.+.|.+.+|..+  ..++++.+++..+.....             .|.=++.||..| |.+.-+|+|. +
T Consensus         4 P~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~~-------------PYyLRL~LP~~V~e~~~~kA~YD~d   70 (134)
T 2k8q_A            4 PRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS-------------PYYLRLRFPHELIDDERSTAQYDSK   70 (134)
T ss_dssp             SEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEECSS-------------SSCEEECCSSCEECCSSCEEEEETT
T ss_pred             ceEEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEecC-------------CeEEEecCCCeeecCCCcceeEecc
Confidence            6679999999999999999999  899999999998887753             455669999999 9999999996 4


Q ss_pred             CCEEEEEEcCcCCC
Q psy14967        142 DGVLTITAPKRVST  155 (168)
Q Consensus       142 ~GiL~I~~PK~~~~  155 (168)
                      .|.|+|++||..+.
T Consensus        71 ~~~~~VtLpK~~~G   84 (134)
T 2k8q_A           71 DECINVKVAKLNKN   84 (134)
T ss_dssp             TTEEEEEEEESSTT
T ss_pred             CCEEEEEEeCCCCC
Confidence            79999999997654

>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.77  E-value=0.00027  Score=50.66  Aligned_cols=81  Identities=10%  Similarity=0.150  Sum_probs=68.5

Q ss_pred             cceeeEeCCCeEEEEEeCCCC---CCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEE-CCcCcccCCcEEEeCC
Q psy14967         66 GVSNITNEENKVQVILDVQQF---SPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYL-LPKDVEIEKVTSSLSS  141 (168)
Q Consensus        66 p~~di~e~~~~~~v~~~lpG~---~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~-LP~~vd~~~i~A~~~~  141 (168)
                      +..+++.+.+.+.|.+.++|+   .++++.|++..+.|.|++....   +     ..|.-.+. |-..|++++-+..+. 
T Consensus        21 ~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~---~-----~~y~~~~~~L~~~I~~e~S~~~v~-   91 (127)
T 1x5m_A           21 SNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLN---G-----KSYSMIVNNLLKPISVEGSSKKVK-   91 (127)
T ss_dssp             CSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCS---S-----SCEEEEEECBSSCCCTTTCEEEEE-
T ss_pred             cEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcCC---C-----CcEEEEhHHhcCccCcccCEEEEe-
Confidence            467999999999999999999   8999999999999999884221   1     25667785 999999999999984 


Q ss_pred             CCEEEEEEcCcCCC
Q psy14967        142 DGVLTITAPKRVST  155 (168)
Q Consensus       142 ~GiL~I~~PK~~~~  155 (168)
                      .+.+.|+|-|+++.
T Consensus        92 ~~kVei~L~K~~~~  105 (127)
T 1x5m_A           92 TDTVLILCRKKVEN  105 (127)
T ss_dssp             TTEEEEEEECSSSS
T ss_pred             CCEEEEEEEECCCC
Confidence            89999999998653

>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3

Probab=97.66  E-value=0.00023  Score=51.77  Aligned_cols=88  Identities=15%  Similarity=0.099  Sum_probs=69.7

Q ss_pred             CcceeeEeC-CCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEeccc-----CCCceEEEEEEEEEECCcCcccCCcEEE
Q psy14967         65 SGVSNITNE-ENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKE-----DEHGFISRQFKRRYLLPKDVEIEKVTSS  138 (168)
Q Consensus        65 ~p~~di~e~-~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~-----~~~~~~~r~F~r~~~LP~~vd~~~i~A~  138 (168)
                      .+..+++++ .+.+.|++.++|+.+++++|++..+.|.|+.+.....     ...+- ...|.-.+.|-..|++++-+.+
T Consensus        19 ~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~-~~~y~~~~~L~~~I~pe~S~~~   97 (134)
T 1wh0_A           19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGP-HTTFRWQVKLRNLIEPEQCTFC   97 (134)
T ss_dssp             CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCT-TSCEEEEEEBSSCEEEEEEEEE
T ss_pred             CCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcccccccccCc-ceeEEEeccccccCCchhCEEE
Confidence            467899999 9999999999999999999999999999997532210     00000 0156677889999999998989


Q ss_pred             eCCCCEEEEEEcCcCC
Q psy14967        139 LSSDGVLTITAPKRVS  154 (168)
Q Consensus       139 ~~~~GiL~I~~PK~~~  154 (168)
                      +. .+.+.|+|.|++.
T Consensus        98 v~-~~kIeI~L~K~e~  112 (134)
T 1wh0_A           98 FT-ASRIDICLRKRQS  112 (134)
T ss_dssp             EC-SSEEEEEEEESSS
T ss_pred             Ee-CCEEEEEEEECCC
Confidence            84 8999999998754

>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4

Probab=97.64  E-value=0.0012  Score=47.04  Aligned_cols=80  Identities=15%  Similarity=0.114  Sum_probs=65.8

Q ss_pred             cceeeEeCCCeEEEEEeCC-CC-CCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCC
Q psy14967         66 GVSNITNEENKVQVILDVQ-QF-SPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDG  143 (168)
Q Consensus        66 p~~di~e~~~~~~v~~~lp-G~-~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~G  143 (168)
                      |...++.+.+.+.|++.|| |. +++|+.|.+..+.|.|..+...   +     ..+.-...|...|+++.-.-++ .+|
T Consensus        20 ~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~---~-----~~~~~~~~L~~~I~~e~S~w~i-~~~   90 (124)
T 1wgv_A           20 ENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEEN---G-----ERVLMEGKLTHKINTESSLWSL-EPG   90 (124)
T ss_dssp             SSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSS---S-----EEEEEEEEBSSCBCTTTCEEEE-CTT
T ss_pred             CcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEccC---C-----CceEEcccccCcCCCcCCEEEE-eCC
Confidence            5689999999999999998 88 8999999999999999875311   1     1233557899999999999999 477


Q ss_pred             E-EEEEEcCcCC
Q psy14967        144 V-LTITAPKRVS  154 (168)
Q Consensus       144 i-L~I~~PK~~~  154 (168)
                      . |.|+|-|+.+
T Consensus        91 k~v~i~L~K~~~  102 (124)
T 1wgv_A           91 KCVLVNLSKVGE  102 (124)
T ss_dssp             SEEEEEECBSSS
T ss_pred             CEEEEEEEECCC
Confidence            5 9999998753

>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2

Probab=97.51  E-value=0.00077  Score=48.11  Aligned_cols=78  Identities=9%  Similarity=0.026  Sum_probs=66.6

Q ss_pred             ceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEE
Q psy14967         67 VSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLT  146 (168)
Q Consensus        67 ~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~  146 (168)
                      .++.+.+.+.+.|++.+|+.  ++++|.+..+.|.+++....  + +    ..|.-.+.|-..|++++-+.++. ++.+.
T Consensus         5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~--~-~----~~y~~~l~L~~~I~~e~S~~~v~-~~kie   74 (125)
T 1ejf_A            5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGS--D-N----FKHLNEIDLFHCIDPNDSKHKRT-DRSIL   74 (125)
T ss_dssp             CEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETT--T-T----EEEEEEEEBSSCEEEEEEEEEEC-SSCEE
T ss_pred             ceeEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCC--C-C----ceEEEEEEccceeccccCEEEEC-CCEEE
Confidence            68999999999999999995  79999999999999986411  1 1    35788889999999999999994 88899


Q ss_pred             EEEcCcCC
Q psy14967        147 ITAPKRVS  154 (168)
Q Consensus       147 I~~PK~~~  154 (168)
                      |+|.|+++
T Consensus        75 i~L~K~~~   82 (125)
T 1ejf_A           75 CCLRKGES   82 (125)
T ss_dssp             EEEEESST
T ss_pred             EEEEECCC
Confidence            99999864

>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}

Probab=97.40  E-value=0.00037  Score=58.70  Aligned_cols=70  Identities=17%  Similarity=0.225  Sum_probs=58.2

Q ss_pred             ceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCC-cEEEeCCCCEE
Q psy14967         67 VSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEK-VTSSLSSDGVL  145 (168)
Q Consensus        67 ~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~-i~A~~~~~GiL  145 (168)
                      ++.|...  .|.+++.|||+++++|++.-.++.|+|+.             +.|+|.+.||.....-. ..|.| +||.|
T Consensus       299 ~~~i~~~--~~~~~l~lP~~~~~~~~l~~~gdeL~v~~-------------g~~rR~i~LP~~L~~~~v~~A~~-~~~~L  362 (374)
T 3igf_A          299 PITIDTH--NRQVRLFLPGFDKKQVKLTQYGPEVTVEA-------------GDQRRNIFLPPALSGRPITGAKF-QNNYL  362 (374)
T ss_dssp             SEEEETT--TTEEEEECTTCCGGGCEEEEETTEEEEEE-------------TTEEEEEECCTTTTTCCEEEEEE-ETTEE
T ss_pred             CEEEEec--cEEEEEECCCCCHHHeEEEEECCeEEEEE-------------CCEeecccCCHHHcCCCccccEE-ECCEE
Confidence            3444333  89999999999999999999999999997             47899999999976664 46778 69999


Q ss_pred             EEEEcCc
Q psy14967        146 TITAPKR  152 (168)
Q Consensus       146 ~I~~PK~  152 (168)
                      +|++-..
T Consensus       363 ~i~~~~~  369 (374)
T 3igf_A          363 IISFLEH  369 (374)
T ss_dssp             EEEECCC
T ss_pred             EEEEehh
Confidence            9998543

>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4

Probab=97.36  E-value=0.0015  Score=46.81  Aligned_cols=77  Identities=14%  Similarity=0.122  Sum_probs=63.3

Q ss_pred             cceeeEeCCCeEEEEEeCC-C--CCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCC
Q psy14967         66 GVSNITNEENKVQVILDVQ-Q--FSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSD  142 (168)
Q Consensus        66 p~~di~e~~~~~~v~~~lp-G--~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~  142 (168)
                      |...++.+.+.+.|++.|| |  ++++++.|.+..+.|.|+.+...           ..-...|...|+++.-.-++ .+
T Consensus         8 ~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~kg~~-----------~~~~~~L~~~I~~e~s~w~i-~~   75 (131)
T 1wfi_A            8 PNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQP-----------PVVDGELYNEVKVEESSWLI-ED   75 (131)
T ss_dssp             CSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEETTSC-----------CSBCSCBSSCBCSTTCEEEE-ET
T ss_pred             CcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEECCce-----------EEEecccccccccccCEEEE-cC
Confidence            4578999999999999999 6  89999999999999999874110           11234688899999999999 58


Q ss_pred             C-EEEEEEcCcCC
Q psy14967        143 G-VLTITAPKRVS  154 (168)
Q Consensus       143 G-iL~I~~PK~~~  154 (168)
                      | .|.|+|-|+.+
T Consensus        76 ~k~v~i~L~K~~~   88 (131)
T 1wfi_A           76 GKVVTVHLEKINK   88 (131)
T ss_dssp             TTEEEEEEEBSSS
T ss_pred             CCEEEEEEEECCC
Confidence            7 89999999865

>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}

Probab=97.25  E-value=0.0015  Score=46.98  Aligned_cols=75  Identities=16%  Similarity=0.190  Sum_probs=61.6

Q ss_pred             cceeeEeCCCeEEEEEeCC-CCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCE
Q psy14967         66 GVSNITNEENKVQVILDVQ-QFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGV  144 (168)
Q Consensus        66 p~~di~e~~~~~~v~~~lp-G~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~Gi  144 (168)
                      |...++.+.+.+.|++.|| |++++++.|.+..+.|.|.++      +.     . .-...|...|+++.-.-++ .+|.
T Consensus         5 ~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~------g~-----~-~~~~~L~~~I~~e~S~w~i-~~~k   71 (131)
T 2o30_A            5 AKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQ------GE-----I-VIDGELLHEVDVSSLWWVI-NGDV   71 (131)
T ss_dssp             CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEET------TE-----E-EEEEEBSSCEEEEEEEEEE-ETTE
T ss_pred             CcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEEC------CE-----e-eEccccccccccccCEEEE-eCCE
Confidence            5678999999999999996 999999999999999999873      11     1 3456799999999888888 5888


Q ss_pred             EEEEEcCcC
Q psy14967        145 LTITAPKRV  153 (168)
Q Consensus       145 L~I~~PK~~  153 (168)
                      |.|+|-|+.
T Consensus        72 v~i~L~K~~   80 (131)
T 2o30_A           72 VDVNVTKKR   80 (131)
T ss_dssp             EEEEEEESS
T ss_pred             EEEEEEECC
Confidence            999999873

>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A

Probab=97.15  E-value=0.002  Score=45.76  Aligned_cols=77  Identities=14%  Similarity=0.119  Sum_probs=63.3

Q ss_pred             cceeeEeCCCeEEEEEeCC-C--CCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCC
Q psy14967         66 GVSNITNEENKVQVILDVQ-Q--FSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSD  142 (168)
Q Consensus        66 p~~di~e~~~~~~v~~~lp-G--~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~  142 (168)
                      |...+..+.+.+.|++.|| |  ++.+|+.|.+..+.|.|..+..           .+.-...|...|+++.-.-.+ .+
T Consensus        17 ~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~kg~-----------~~~~~g~L~~~I~~deS~w~i-~~   84 (121)
T 3qor_A           17 PNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQ-----------PAIIDGELYNEVKVEESSWLI-AD   84 (121)
T ss_dssp             SSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEETTS-----------CCSEEEEBSSCBCGGGCEEEE-ET
T ss_pred             CCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEcCc-----------ceEEeccccccccccccEEEE-cC
Confidence            5578999999999999999 4  7899999999999999876421           112345789999999989999 58


Q ss_pred             C-EEEEEEcCcCC
Q psy14967        143 G-VLTITAPKRVS  154 (168)
Q Consensus       143 G-iL~I~~PK~~~  154 (168)
                      | .|.|+|-|...
T Consensus        85 ~~~i~i~L~K~~~   97 (121)
T 3qor_A           85 GAVVTVHLEKINK   97 (121)
T ss_dssp             TTEEEEEEEBSSS
T ss_pred             CCEEEEEEEECCC
Confidence            7 99999998754

>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}

Probab=97.14  E-value=0.0011  Score=49.03  Aligned_cols=77  Identities=13%  Similarity=0.135  Sum_probs=64.5

Q ss_pred             cceeeEeCCCeEEEEEeCCCCCCCceEEEEE-CCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCE
Q psy14967         66 GVSNITNEENKVQVILDVQQFSPNEISIKTV-DGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGV  144 (168)
Q Consensus        66 p~~di~e~~~~~~v~~~lpG~~~edi~V~v~-~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~Gi  144 (168)
                      |.++++.+.+.+.|++.+++.  ++++|++. .+.|.+++. .  .++     ..|.-.+.|=..|+++ -+.+.+ ...
T Consensus         5 P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~-~--~~~-----~~y~~~l~L~~~Idpe-S~~~v~-~~k   72 (150)
T 2kmw_A            5 PEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSAL-G--AQG-----ERFEFSLELYGKIMTE-YRKNVG-LRN   72 (150)
T ss_dssp             CCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEE-T--TTT-----EEEEEEEEBSSCEEEE-EEEEEE-SSS
T ss_pred             CcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEE-c--CCC-----ceEEEEeEhhhccccc-ceEEec-CCE
Confidence            678999999999999999997  58999999 789999986 1  111     4678888999999999 777774 788


Q ss_pred             EEEEEcCcCC
Q psy14967        145 LTITAPKRVS  154 (168)
Q Consensus       145 L~I~~PK~~~  154 (168)
                      +.|+|.|+++
T Consensus        73 Iei~L~K~e~   82 (150)
T 2kmw_A           73 IIFSIQKEER   82 (150)
T ss_dssp             EEEEEEECCS
T ss_pred             EEEEEEECCC
Confidence            9999998764

>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}

Probab=97.12  E-value=0.0026  Score=47.27  Aligned_cols=76  Identities=12%  Similarity=-0.004  Sum_probs=64.1

Q ss_pred             cceeeEeCCCeEEEEEeCC-CCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCE
Q psy14967         66 GVSNITNEENKVQVILDVQ-QFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGV  144 (168)
Q Consensus        66 p~~di~e~~~~~~v~~~lp-G~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~Gi  144 (168)
                      |...++.+.+.+.|++.|| |+++++|.|.+..+.|.|+.+.        .   . .-...|...|+++.-.-++ .+|.
T Consensus        14 ~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~kg--------~---~-~l~g~L~~~I~~eeS~w~i-~~~k   80 (157)
T 2rh0_A           14 PWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGG--------R---E-ILKGKLFDSTIADEGTWTL-EDRK   80 (157)
T ss_dssp             SSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEETT--------E---E-EEEEEBSSCBCGGGCEEEE-ECCC
T ss_pred             CcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEECC--------E---E-EEeeccccccCccccEEEE-cCCc
Confidence            5689999999999999998 8999999999999999998731        1   1 2456799999999999999 4774


Q ss_pred             -EEEEEcCcCC
Q psy14967        145 -LTITAPKRVS  154 (168)
Q Consensus       145 -L~I~~PK~~~  154 (168)
                       |.|+|-|+.+
T Consensus        81 ~v~I~L~K~~~   91 (157)
T 2rh0_A           81 MVRIVLTKTKR   91 (157)
T ss_dssp             EEEEEEEBSSC
T ss_pred             EEEEEEEEcCC
Confidence             9999999865

>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}

Probab=97.08  E-value=0.0004  Score=50.32  Aligned_cols=84  Identities=10%  Similarity=0.107  Sum_probs=60.5

Q ss_pred             cceeeEeCCCe-------EEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEE
Q psy14967         66 GVSNITNEENK-------VQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSS  138 (168)
Q Consensus        66 p~~di~e~~~~-------~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~  138 (168)
                      |.+..+.+.+.       +.|++.+|+.+  +++|.+..+.|.+++......  ++.....|.-.+.|...|++++-+.+
T Consensus         7 p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~~~l~~~~~~~~~~--g~~~~~~y~~~l~L~~~Idpe~S~~~   82 (134)
T 2cg9_X            7 PQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKPSYIELKAQSKPHV--GDENVHHYQLHIDLYKEIIPEKTMHK   82 (134)
T ss_dssp             ----CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCSSEEEECCEEC---------CEEBCEEEECSSCCCSSSEEEE
T ss_pred             CCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEECCEEEEEEeccccc--CCccCceEEEEEEChhhccccccEEE
Confidence            45666666655       99999999974  899999999999997643200  00001467888999999999999999


Q ss_pred             eCCCCE-EEEEEcCcCC
Q psy14967        139 LSSDGV-LTITAPKRVS  154 (168)
Q Consensus       139 ~~~~Gi-L~I~~PK~~~  154 (168)
                      +. ++. +.|+|.|+++
T Consensus        83 v~-~~~~vei~L~K~~~   98 (134)
T 2cg9_X           83 VA-NGQHYFLKLYKKDL   98 (134)
T ss_dssp             EC-CC--CEEEEEECSS
T ss_pred             EC-CCEEEEEEEEECCC
Confidence            95 888 9999999873

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	168
d1shsa_	115	b.15.1.1 (A:) Small heat shock protein {Archaeon M	2e-11
d1gmea_	150	b.15.1.1 (A:) Small heat shock protein {Wheat (Tri	6e-10

>d1shsa_ b.15.1.1 (A:) Small heat shock protein {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 115

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 55.8 bits (134), Expect = 2e-11
 Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 9/92 (9%)

Query: 69  NITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDE--------HGFISRQF 120
           +I   +  ++VI  +   +  +I +  V   + +  K                     + 
Sbjct: 14  SIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEI 73

Query: 121 KRRYLLPKDVEIEKVTSSLSSDGVLTITAPKR 152
            R   LP  V+ E  ++    +GVL++  PK 
Sbjct: 74  YRTIKLPATVKEENASAKFE-NGVLSVILPKA 104

>d1gmea_ b.15.1.1 (A:) Small heat shock protein {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 150

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score = 52.8 bits (126), Expect = 6e-10
 Identities = 29/136 (21%), Positives = 51/136 (37%), Gaps = 13/136 (9%)

Query: 30  LRRDDLLSNWSSLAQSARPIGAGYLRPWRSLARSNSGVSN----ITNEENKVQVILDVQQ 85
           +RR ++   ++ L           +          +  +N                D+  
Sbjct: 3   VRRSNVFDPFADLWADPFDTFRSIVPAISGGGSETAAFANARMDWKETPEAHVFKADLPG 62

Query: 86  FSPNEISIKTVDGFILVEGKHEEKEDEH--------GFISRQFKRRYLLPKDVEIEKVTS 137
               E+ ++  DG +LV      KE E            S +F RR+ L +D ++E+V +
Sbjct: 63  VKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKA 122

Query: 138 SLSSDGVLTITAPKRV 153
            L  +GVLT+T PK  
Sbjct: 123 GLE-NGVLTVTVPKAE 137

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	168
d1gmea_	150	Small heat shock protein {Wheat (Triticum aestivum	99.91
d1shsa_	115	Small heat shock protein {Archaeon Methanococcus j	99.91
d1rl1a_	92	Suppressor of G2 allele of skp1 homolog, gst1 {Hum	98.3
d1ejfa_	110	Co-chaperone p23 {Human (Homo sapiens) [TaxId: 960	97.51
d1wh0a_	134	Ubiquitin carboxyl-terminal hydrolase 19, USP19 {H	97.22
d1wgva_	124	NudC domain containing protein 3, NUDCD3 (KIAA1068	96.82
d1wfia_	131	Nuclear migration protein nudC {Mouse (Mus musculu	96.46
d1rl6a1	75	Ribosomal protein L6 {Bacillus stearothermophilus	83.11

>d1gmea_ b.15.1.1 (A:) Small heat shock protein {Wheat (Triticum aestivum) [TaxId: 4565]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Wheat (Triticum aestivum) [TaxId: 4565]

Probab=99.91  E-value=4.4e-25  Score=163.66  Aligned_cols=100  Identities=20%  Similarity=0.385  Sum_probs=86.3

Q ss_pred             CcceeeEeCCCeEEEEEeCCCCCCCceEEEEEC-CEEEEEEEEecccC--CCceEE-----EEEEEEEECCcCcccCCcE
Q psy14967         65 SGVSNITNEENKVQVILDVQQFSPNEISIKTVD-GFILVEGKHEEKED--EHGFIS-----RQFKRRYLLPKDVEIEKVT  136 (168)
Q Consensus        65 ~p~~di~e~~~~~~v~~~lpG~~~edi~V~v~~-~~L~I~g~~~~~~~--~~~~~~-----r~F~r~~~LP~~vd~~~i~  136 (168)
                      .|.+||.+++++|+|+++|||++++||+|++++ +.|+|+|++.....  +..++.     ++|+|+|.||.+||.++|+
T Consensus        42 ~p~~dv~e~~~~~~i~~~lPG~~~edi~v~v~~~~~l~i~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~  121 (150)
T d1gmea_          42 NARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVK  121 (150)
T ss_dssp             GGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCE
T ss_pred             CCceeEEECCCEEEEEEEeCCCccCCEEEEEEEccceeEEEEEecccccccceeeeeeeccceEEEEEECCCCeeeceeE
Confidence            478999999999999999999999999999986 57899998655432  233443     4799999999999999999


Q ss_pred             EEeCCCCEEEEEEcCcCCCCCeeeEEEee
Q psy14967        137 SSLSSDGVLTITAPKRVSTRFYFFSLKLN  165 (168)
Q Consensus       137 A~~~~~GiL~I~~PK~~~~~~~~i~i~~~  165 (168)
                      |.| +||+|+|++||.++.+++.+.|+|.
T Consensus       122 A~~-~nGvL~I~lpK~~~~~~~~~~I~I~  149 (150)
T d1gmea_         122 AGL-ENGVLTVTVPKAEVKKPEVKAIQIS  149 (150)
T ss_dssp             EEE-ETTEEEEEEECCCCCTTCCCCCCCC
T ss_pred             EEE-ECCEEEEEEEcCCcCCCCceEEecc
Confidence            999 5999999999999988888888763

>d1shsa_ b.15.1.1 (A:) Small heat shock protein {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.91  E-value=1.8e-24  Score=153.46  Aligned_cols=97  Identities=19%  Similarity=0.274  Sum_probs=85.0

Q ss_pred             cceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEeccc--CCCceE------EEEEEEEEECCcCcccCCcEE
Q psy14967         66 GVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKE--DEHGFI------SRQFKRRYLLPKDVEIEKVTS  137 (168)
Q Consensus        66 p~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~--~~~~~~------~r~F~r~~~LP~~vd~~~i~A  137 (168)
                      +++||++++++|.|.++|||++++||+|+++++.|+|+|++....  +...+.      .+.|+|+|.||.++|.++++|
T Consensus        11 ~pvdi~e~~~~~~i~~~lPG~~~edi~v~v~~~~l~I~~~~~~~~~~~~~~~~~~~~~~~~~f~r~~~lP~~vd~~~i~A   90 (115)
T d1shsa_          11 MPISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASA   90 (115)
T ss_dssp             CCEEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCTTCEEEEECSCCCCEEEEEEECSSCBCGGGCEE
T ss_pred             CceEEEEcCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEeccccccccccEEEEeeecccceEEEEecCCceeecceEE
Confidence            459999999999999999999999999999999999999875542  222222      358999999999999999999


Q ss_pred             EeCCCCEEEEEEcCcCCCCCeeeEEE
Q psy14967        138 SLSSDGVLTITAPKRVSTRFYFFSLK  163 (168)
Q Consensus       138 ~~~~~GiL~I~~PK~~~~~~~~i~i~  163 (168)
                      .| +||+|+|++||.++.++++|+|+
T Consensus        91 ~~-~nGvL~I~lpK~~~~~~~~I~Ie  115 (115)
T d1shsa_          91 KF-ENGVLSVILPKAESSIKKGINIE  115 (115)
T ss_dssp             EE-ETTEEEEEEEBCGGGCCEECCCC
T ss_pred             EE-ECCEEEEEEEeCCCCCCceeeeC
Confidence            99 59999999999999999888774

>d1rl1a_ b.15.1.3 (A:) Suppressor of G2 allele of skp1 homolog, gst1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: GS domain
domain: Suppressor of G2 allele of skp1 homolog, gst1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=1.6e-06  Score=57.03  Aligned_cols=79  Identities=13%  Similarity=0.121  Sum_probs=68.4

Q ss_pred             ceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEE
Q psy14967         67 VSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLT  146 (168)
Q Consensus        67 ~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~  146 (168)
                      .-+.+++++.+.|++.+||+.++++.|.+.++.|.++.....   +     ..|.-.+.|...|+++..+.++ .++.+.
T Consensus         4 ry~W~Qt~~~V~i~i~~~~~~~~~v~v~~~~~~l~v~~~~~~---~-----~~y~~~~~L~~~I~p~~s~~~~-~~~kie   74 (92)
T d1rl1a_           4 KYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPS---G-----EDYNLKLELLHPIIPEQSTFKV-LSTKIE   74 (92)
T ss_dssp             CEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECTT---S-----SEEEEEECBSSCCCGGGEEEEE-CSSSEE
T ss_pred             ceeEEeCCCEEEEEEEeCCCChHheEEEEecCEEEEEEEcCC---C-----cEEEEEEEcCcccCchhcEEEE-eCCEEE
Confidence            468999999999999999999999999999999999875321   1     2577788999999999999999 489999


Q ss_pred             EEEcCcCC
Q psy14967        147 ITAPKRVS  154 (168)
Q Consensus       147 I~~PK~~~  154 (168)
                      |+|-|+++
T Consensus        75 i~L~K~~~   82 (92)
T d1rl1a_          75 IKLKKPEA   82 (92)
T ss_dssp             EEEECSSC
T ss_pred             EEEEECCC
Confidence            99999764

>d1ejfa_ b.15.1.2 (A:) Co-chaperone p23 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: Co-chaperone p23-like
domain: Co-chaperone p23
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=0.00048  Score=46.23  Aligned_cols=80  Identities=8%  Similarity=0.006  Sum_probs=66.4

Q ss_pred             cceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEE
Q psy14967         66 GVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVL  145 (168)
Q Consensus        66 p~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL  145 (168)
                      |.+..+.+.+.+.|++.+||.  .+++|+++.+.+.+++.....   +    ..|.-.+.|...|+++.-+.++ .++.+
T Consensus         4 ~~~~W~Qt~~~V~i~I~v~~~--~~~~v~i~~~~l~~~~~~~~~---~----~~y~l~~~L~~~I~~~~s~~~v-~~~ki   73 (110)
T d1ejfa_           4 ASAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGSD---N----FKHLNEIDLFHCIDPNDSKHKR-TDRSI   73 (110)
T ss_dssp             CCEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETTT---T----EEEEEEEEBSSCEEEEEEEEEE-CSSCE
T ss_pred             CCcEEEECCCEEEEEEEeCCC--CCceEEEEeceEEEEEEecCC---C----ceEEEEEEcccCcccCccEEEE-eCCEE
Confidence            457899999999999999984  688999999999999864321   1    2567778999999999999999 58899


Q ss_pred             EEEEcCcCCC
Q psy14967        146 TITAPKRVST  155 (168)
Q Consensus       146 ~I~~PK~~~~  155 (168)
                      .|+|-|+++.
T Consensus        74 ei~L~K~~~~   83 (110)
T d1ejfa_          74 LCCLRKGESG   83 (110)
T ss_dssp             EEEEEESSTT
T ss_pred             EEEEEEcCCC
Confidence            9999997653

>d1wh0a_ b.15.1.3 (A:) Ubiquitin carboxyl-terminal hydrolase 19, USP19 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: GS domain
domain: Ubiquitin carboxyl-terminal hydrolase 19, USP19
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=0.0012  Score=46.23  Aligned_cols=89  Identities=13%  Similarity=0.065  Sum_probs=70.2

Q ss_pred             cceeeEeCC-CeEEEEEeCCCCCCCceEEEEECCEEEEEEEEeccc----CCCceEEEEEEEEEECCcCcccCCcEEEeC
Q psy14967         66 GVSNITNEE-NKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKE----DEHGFISRQFKRRYLLPKDVEIEKVTSSLS  140 (168)
Q Consensus        66 p~~di~e~~-~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~----~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~  140 (168)
                      ..-+.+++. +.+.|.+.+.|+.+++++|.+.++.|.|+-......    ....-..+.|.-.+.|-..|++++-+...+
T Consensus        20 ir~dwyq~~~~~V~VtI~~K~v~ke~~~V~f~~~sl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~I~pe~S~~~v~   99 (134)
T d1wh0a_          20 VKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCTFCFT   99 (134)
T ss_dssp             CCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCEEEEEEEEEEC
T ss_pred             cccceeecCCCEEEEEEEeCCCchhheEEEEeCCEEEEEEECCCCcceeeccccCcCeeEEEeeecccccChhHcEEEeC
Confidence            346888884 789999999999999999999999999997532210    000001147889999999999999999995


Q ss_pred             CCCEEEEEEcCcCCC
Q psy14967        141 SDGVLTITAPKRVST  155 (168)
Q Consensus       141 ~~GiL~I~~PK~~~~  155 (168)
                       .+.+.|+|-|+++.
T Consensus       100 -~~kiei~L~K~~~~  113 (134)
T d1wh0a_         100 -ASRIDICLRKRQSQ  113 (134)
T ss_dssp             -SSEEEEEEEESSSC
T ss_pred             -CCEEEEEEEeCCCC
Confidence             99999999987653

>d1wgva_ b.15.1.4 (A:) NudC domain containing protein 3, NUDCD3 (KIAA1068) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: Nuclear movement domain
domain: NudC domain containing protein 3, NUDCD3 (KIAA1068)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.02  Score=38.63  Aligned_cols=79  Identities=15%  Similarity=0.122  Sum_probs=60.0

Q ss_pred             cceeeEeCCCeEEEEEeCCC--CCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCC
Q psy14967         66 GVSNITNEENKVQVILDVQQ--FSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDG  143 (168)
Q Consensus        66 p~~di~e~~~~~~v~~~lpG--~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~G  143 (168)
                      +.-.+.++.+.+.|.+.||.  .+++||.|++..+.|.|+-+....        ..+.-...|...|+++.-.-.+. ++
T Consensus        20 ~~Y~W~Qt~~~V~i~i~lp~~~~k~kdv~v~~~~~~l~v~v~~~~~--------~~~~l~g~L~~~I~~deS~w~i~-~~   90 (124)
T d1wgva_          20 ENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEENG--------ERVLMEGKLTHKINTESSLWSLE-PG   90 (124)
T ss_dssp             SSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSSS--------EEEEEEEEBSSCBCTTTCEEEEC-TT
T ss_pred             CCeEEEeECCEEEEEEEeCCCCcchhhEEEEEEeCEEEEEEeccCC--------cceEEeCcccCcccccccEEEEe-CC
Confidence            45689999999999999984  456899999999999988653211        13344567999999999999994 66


Q ss_pred             -EEEEEEcCcC
Q psy14967        144 -VLTITAPKRV  153 (168)
Q Consensus       144 -iL~I~~PK~~  153 (168)
                       +|.+.+.|..
T Consensus        91 ~~~i~~lkK~~  101 (124)
T d1wgva_          91 KCVLVNLSKVG  101 (124)
T ss_dssp             SEEEEEECBSS
T ss_pred             CEEEEEEEecC
Confidence             5555665544

>d1wfia_ b.15.1.4 (A:) Nuclear migration protein nudC {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: Nuclear movement domain
domain: Nuclear migration protein nudC
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.46  E-value=0.016  Score=39.79  Aligned_cols=79  Identities=11%  Similarity=0.131  Sum_probs=59.6

Q ss_pred             cceeeEeCCCeEEEEEeCC---CCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCC
Q psy14967         66 GVSNITNEENKVQVILDVQ---QFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSD  142 (168)
Q Consensus        66 p~~di~e~~~~~~v~~~lp---G~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~  142 (168)
                      |.-.+..+.+.+.|.+.+|   |++++||.|++..+.|.|..+....     +..+      .|...|+++.-.-.+..+
T Consensus         8 ~~Y~W~Qt~~eV~I~V~~~~~~~~~~~di~v~i~~~~l~v~v~~~~~-----ll~g------~L~~~I~~des~W~ied~   76 (131)
T d1wfia_           8 PNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQPP-----VVDG------ELYNEVKVEESSWLIEDG   76 (131)
T ss_dssp             CSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEETTSCC-----SBCS------CBSSCBCSTTCEEEEETT
T ss_pred             CCeEEEeeCCEEEEEEEcCCCCCcchhhEEEEeeCCEEEEEEcCCce-----eecc------cccCcccccccEEEEeCC
Confidence            5568889999988888664   7899999999999999998642211     1111      477889998888888423


Q ss_pred             CEEEEEEcCcCCC
Q psy14967        143 GVLTITAPKRVST  155 (168)
Q Consensus       143 GiL~I~~PK~~~~  155 (168)
                      ++|.|+|-|+.+.
T Consensus        77 ~~l~i~L~K~~~~   89 (131)
T d1wfia_          77 KVVTVHLEKINKM   89 (131)
T ss_dssp             TEEEEEEEBSSSC
T ss_pred             CEEEEEEEECCCC
Confidence            5899999987653

>d1rl6a1 d.141.1.1 (A:7-81) Ribosomal protein L6 {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein L6
superfamily: Ribosomal protein L6
family: Ribosomal protein L6
domain: Ribosomal protein L6
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=83.11  E-value=1.8  Score=26.14  Aligned_cols=43  Identities=19%  Similarity=0.341  Sum_probs=31.2

Q ss_pred             CCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEEEEE
Q psy14967         88 PNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITA  149 (168)
Q Consensus        88 ~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~~  149 (168)
                      |+.++|+++++.|+|+|.+-           +  -++.+|..     |.... +|+.|.|..
T Consensus         5 P~gV~v~i~~~~i~vkGpkG-----------~--L~~~~~~~-----v~i~~-~~~~i~v~~   47 (75)
T d1rl6a1           5 PAGVTVTVNGNTVTVKGPKG-----------E--LTRTFHPD-----MTITV-EGNVITVTR   47 (75)
T ss_dssp             CTTCEEEEETTEEEEEETTE-----------E--EEEECCTT-----CEEEE-ETTEEEEEC
T ss_pred             CCCcEEEEECCEEEEEeCCE-----------E--EEEeccCc-----EEEEE-eCceEEEcc
Confidence            68999999999999999532           2  23345654     45567 589988874