Psyllid ID: psy15048

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------
Protein Sequence
MASPGTDQHRVTFYASETPQAEGSMNIPGINQNKATGHPEYNTLDEPIRTTIMRDLSAVGDLWGPLLLCTFMAIVLQGSSDESINDGGPQFAEVFVIVWIGSGVVTLNSKLLGGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVSFLGDSQPVGRKGLAVYPIFLFYFVIAWLILSHTVE
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccccccEEEEEHHHHHHHHHHHHHHccccccccHHEEHHHHHcHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
maspgtdqhrvtfyasetpqaegsmnipginqnkatghpeyntldepiRTTIMRDLSavgdlwgpLLLCTFMAIVLqgssdesindggpqFAEVFVIVWIGSGVVtlnskllggnisFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVsflgdsqpvgrkglavyPIFLFYFVIAWLILSHTVE
Flexible Loop (DISEMBL)
maspgtdqhrvTFYASetpqaegsmnIPGINQNKATGHPEYNTLDEPIRTTIMRDLSAVGDLWGPLLLCTFMAIVLQGSSDESINDGGPQFAEVFVIVWIGSGVVTLNSKLLGGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVSFLGDSQPVGRKGLAVYPIFLFYFVIAWLILSHTVE
Low Complexity Region (SEG)
MASPGTDQHRVTFYASETPQAEGSMNIPGINQNKATGHPEYNTLDEPIRTTIMRDLSAVGDLWGPLLLCTFMAIVLQGSSDESINDGGPQFAEVFVIVWIGSGVVTLNSKLLGGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVSFLGDSQPVGRKGLAVYPIFLFYFVIAWLILSHTVE
Disordered region (IsUnstruct)
******************************************TLDEPIRTTIMRDLSAVGDLWGPLLLCTFMAIVLQGSSDESINDGGPQFAEVFVIVWIGSGVVTLNSKLLGGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVSFLGDSQPVGRKGLAVYPIFLFYFVIAWLILSH***
Disordered Region (DISOPRED)
******************************************TLDEPIRTTIMRDLSAVGDLWGPLLLCTFMAIVLQGSSDES*NDGGPQFAEVFVIVWIGSGVVTLNSKLLGGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVSFLGDSQPVGRKGLAVYPIFLFYFVIAWLILSHTV*
Disordered Region (DISEMBL)
********HRVTFYASETPQAEGSMNIPGINQNKATGHPEYNTLDEPIRTTIMRDLSAVGDLWGPLLLCTFMAIVLQGSSDESINDGGPQFAEVFVIVWIGSGVVTLNSKLLGGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVSFLGDSQPVGRKGLAVYPIFLFYFVIAWLILSHTVE
Disordered Region (DISPRO)
***************S*TPQAEGSMNIPGIN********EYNTLDEPIRTTIMRDLSAVGDLWGPLLLCTFMAIVLQGSSDESINDGGPQFAEVFVIVWIGSGVVTLNSKLLGGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVSFLGDSQPVGRKGLAVYPIFLFYFVIAWLILSHTV*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASPGTDQHRVTFYASETPQAEGSMNIPGINQNKATGHPEYNTLDEPIRTTIMRDLSAVGDLWGPLLLCTFMAIVLQGSSDESINDGGPQFAEVFVIVWIGSGVVTLNSKLLGGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVSFLGDSQPVGRKGLAVYPIFLFYFVIAWLILSHTVE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	207	2.2.26 [Sep-21-2011]
Q28CH8	233	Protein YIPF6 OS=Xenopus	yes	N/A	0.864	0.768	0.512	2e-56
Q6IQ85	240	Protein YIPF6 OS=Danio re	yes	N/A	0.893	0.770	0.512	2e-56
Q8BR70	236	Protein YIPF6 OS=Mus musc	yes	N/A	0.874	0.766	0.529	2e-54
Q96EC8	236	Protein YIPF6 OS=Homo sap	yes	N/A	0.966	0.847	0.478	7e-54
A6QLC6	236	Protein YIPF6 OS=Bos taur	yes	N/A	0.966	0.847	0.482	9e-54
Q4QQU5	236	Protein YIPF6 OS=Rattus n	yes	N/A	0.874	0.766	0.509	2e-52
Q54RZ2	182	Protein YIPF6 homolog OS=	yes	N/A	0.748	0.851	0.437	8e-34
Q9P6P8	225	Protein YIP4 OS=Schizosac	yes	N/A	0.792	0.728	0.367	3e-26
Q5ZJD7	249	Protein YIPF4 OS=Gallus g	no	N/A	0.565	0.469	0.333	1e-08
Q9BSR8	244	Protein YIPF4 OS=Homo sap	no	N/A	0.565	0.479	0.333	1e-08

>sp|Q28CH8|YIPF6_XENTR Protein YIPF6 OS=Xenopus tropicalis GN=yipf6 PE=2 SV=1

 Score =  218 bits (556), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 103/201 (51%), Positives = 142/201 (70%), Gaps = 22/201 (10%)

Query: 22  EGSMNIPGINQNKATGHPEYNTLDEPIRTTIMRDLSAVG-------------------DL 62
           EG + +P  + ++     + +TLDEP++ TIMRDL AVG                   DL
Sbjct: 31  EGEITVPMASTSQ---EDDLSTLDEPVKDTIMRDLKAVGNKFLHVMYPKKSTTLLRDWDL 87

Query: 63  WGPLLLCTFMAIVLQGSSDESINDGGPQFAEVFVIVWIGSGVVTLNSKLLGGNISFFQSV 122
           WGPL+LC  +A++LQG + +S +DGGPQFAEVFVI+W G+ V+TLNSKLLGG ISFFQS+
Sbjct: 88  WGPLVLCVSLALMLQGGNADSKDDGGPQFAEVFVIIWFGAVVITLNSKLLGGTISFFQSL 147

Query: 123 CVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVSFLGDSQPVGR 182
           CVLGYC+LPL +++++CR++L  + T   F +R ++    F W+TFAS +FL DSQP  R
Sbjct: 148 CVLGYCILPLTVAMLVCRLVLLLSHTTASFIVRLVVVTVMFAWSTFASTAFLADSQPPNR 207

Query: 183 KGLAVYPIFLFYFVIAWLILS 203
           + LAVYPIFLFYFVI+W++L+
Sbjct: 208 RALAVYPIFLFYFVISWMVLT 228

Xenopus tropicalis (taxid: 8364)

>sp|Q6IQ85|YIPF6_DANRE Protein YIPF6 OS=Danio rerio GN=yipf6 PE=2 SV=1

 Score =  218 bits (555), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 106/207 (51%), Positives = 140/207 (67%), Gaps = 22/207 (10%)

Query: 16  SETPQAEGSMNIPGINQNKATGHPEYNTLDEPIRTTIMRDLSAVG--------------- 60
           SE    EG +++P  +QN      +++TLDEP++ TI+RDL AVG               
Sbjct: 32  SEDIPVEGDISVPVGSQNADN---DFSTLDEPVKDTILRDLRAVGQKFVHVMYPKKSSAL 88

Query: 61  ----DLWGPLLLCTFMAIVLQGSSDESINDGGPQFAEVFVIVWIGSGVVTLNSKLLGGNI 116
               DLWGPLLLC  +A++LQG S +S  DG PQFAEVFVI+W GS ++TLNSKLLGG I
Sbjct: 89  LRDWDLWGPLLLCVTLALMLQGGSADSEEDGRPQFAEVFVIIWFGSVIITLNSKLLGGTI 148

Query: 117 SFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVSFLGD 176
           SFFQS+CVLGYC+LPL +++++CR++L        F +R ++    F W+TFAS +FL D
Sbjct: 149 SFFQSLCVLGYCILPLTVAMIVCRIVLLGGSGVVSFAVRLIVVTASFSWSTFASTAFLAD 208

Query: 177 SQPVGRKGLAVYPIFLFYFVIAWLILS 203
           SQP  RK L VYP+FLFYFVI W+IL+
Sbjct: 209 SQPTNRKALVVYPVFLFYFVIGWMILT 235

Danio rerio (taxid: 7955)

>sp|Q8BR70|YIPF6_MOUSE Protein YIPF6 OS=Mus musculus GN=Yipf6 PE=2 SV=1

 Score =  212 bits (539), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 108/204 (52%), Positives = 141/204 (69%), Gaps = 23/204 (11%)

Query: 22  EGSMNIPGINQNKATGHPEYNTLDEPIRTTIMRDLSAVG-------------------DL 62
           EG + IP  ++ +A  H + +TL+E IR TIMRDL AVG                   DL
Sbjct: 35  EGEITIP--SRARAQEH-DSSTLNESIRRTIMRDLKAVGRKFMHVLYPRKSNALLRDWDL 91

Query: 63  WGPLLLCTFMAIVLQGSSDESINDGG-PQFAEVFVIVWIGSGVVTLNSKLLGGNISFFQS 121
           WGPL+LC  +A++LQ SS +  NDGG P+FAEVFVI+W G+  +TLNSKLLGGNISFFQS
Sbjct: 92  WGPLILCVTLALMLQKSSIDGKNDGGGPEFAEVFVIIWFGAVTITLNSKLLGGNISFFQS 151

Query: 122 VCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVSFLGDSQPVG 181
           +CVLGYC+LPL +++++CR++L A Q    F IR  + +  F W+  AS +FL DSQP  
Sbjct: 152 LCVLGYCILPLNIAMLICRLLLLAGQGPINFMIRLFVVLLMFAWSVVASTAFLADSQPPN 211

Query: 182 RKGLAVYPIFLFYFVIAWLILSHT 205
           RK LAVYP+FLFYFVI+W+IL+ T
Sbjct: 212 RKALAVYPVFLFYFVISWMILTFT 235

Mus musculus (taxid: 10090)

>sp|Q96EC8|YIPF6_HUMAN Protein YIPF6 OS=Homo sapiens GN=YIPF6 PE=2 SV=2

 Score =  210 bits (534), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 109/228 (47%), Positives = 144/228 (63%), Gaps = 28/228 (12%)

Query: 3   SPGTDQHRVTFYA------SETPQAEGSMNIPGINQNKATGHPEYNTLDEPIRTTIMRDL 56
            PGT   R  F        S+    EG + IP  ++ +     + +TL+E +R TIMRDL
Sbjct: 10  DPGTASPRPLFAGLSDISISQDIPVEGEITIPMRSRIREF---DSSTLNESVRNTIMRDL 66

Query: 57  SAVG-------------------DLWGPLLLCTFMAIVLQGSSDESINDGGPQFAEVFVI 97
            AVG                   DLWGPL+LC  +A++LQ  S +S  DGGPQFAEVFVI
Sbjct: 67  KAVGKKFMHVLYPRKSNTLLRDWDLWGPLILCVTLALMLQRDSADSEKDGGPQFAEVFVI 126

Query: 98  VWIGSGVVTLNSKLLGGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFL 157
           VW G+  +TLNSKLLGGNISFFQS+CVLGYC+LPL +++++CR++L A      F +R  
Sbjct: 127 VWFGAVTITLNSKLLGGNISFFQSLCVLGYCILPLTVAMLICRLVLLADPGPVNFMVRLF 186

Query: 158 ITMFGFGWATFASVSFLGDSQPVGRKGLAVYPIFLFYFVIAWLILSHT 205
           + +  F W+  AS +FL DSQP  R+ LAVYP+FLFYFVI+W+IL+ T
Sbjct: 187 VVIVMFAWSIVASTAFLADSQPPNRRALAVYPVFLFYFVISWMILTFT 234

Homo sapiens (taxid: 9606)

>sp|A6QLC6|YIPF6_BOVIN Protein YIPF6 OS=Bos taurus GN=YIPF6 PE=2 SV=1

 Score =  209 bits (533), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 110/228 (48%), Positives = 144/228 (63%), Gaps = 28/228 (12%)

Query: 3   SPGTDQHRVTFYA------SETPQAEGSMNIPGINQNKATGHPEYNTLDEPIRTTIMRDL 56
            PGT   R  F        S+    EG + IP  ++ +     + +TL+E ++ TIMRDL
Sbjct: 10  DPGTTTPRPLFAGLSDISISQDIPVEGEITIPVRSRVREF---DSSTLNESVQNTIMRDL 66

Query: 57  SAVG-------------------DLWGPLLLCTFMAIVLQGSSDESINDGGPQFAEVFVI 97
            AVG                   DLWGPL+LC  +A++LQ  S +S  DGGPQFAEVFVI
Sbjct: 67  KAVGKKFMHVLYPRKSNTLLRDWDLWGPLILCVTLALMLQRGSVDSEKDGGPQFAEVFVI 126

Query: 98  VWIGSGVVTLNSKLLGGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFL 157
           VW G+  +TLNSKLLGGNISFFQS+CVLGYC+LPL M++++CR++L A      F +R  
Sbjct: 127 VWFGAVTITLNSKLLGGNISFFQSLCVLGYCILPLTMAMLVCRLVLLAEPGPVNFMVRLF 186

Query: 158 ITMFGFGWATFASVSFLGDSQPVGRKGLAVYPIFLFYFVIAWLILSHT 205
           + +  F W+  AS +FL DSQP  RK LAVYP+FLFYFVI+W+IL+ T
Sbjct: 187 VVIIMFAWSIVASTAFLADSQPPNRKALAVYPVFLFYFVISWMILTFT 234

Bos taurus (taxid: 9913)

>sp|Q4QQU5|YIPF6_RAT Protein YIPF6 OS=Rattus norvegicus GN=Yipf6 PE=2 SV=1

 Score =  204 bits (520), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 104/204 (50%), Positives = 136/204 (66%), Gaps = 23/204 (11%)

Query: 22  EGSMNIPGINQNKATGHPEYNTLDEPIRTTIMRDLSAVG-------------------DL 62
           EG + IP   + +     + +TL+E IR TIMRDL AVG                   DL
Sbjct: 35  EGEITIPSGTRAQEC---DSSTLNESIRRTIMRDLKAVGRKFMHVLYPRKSNTLLRDWDL 91

Query: 63  WGPLLLCTFMAIVLQGSSDESINDGG-PQFAEVFVIVWIGSGVVTLNSKLLGGNISFFQS 121
           WGPL+LC  +A++LQ SS E   DGG P+FAEVFVI+W G+  +TLNSKLLGGNISFFQS
Sbjct: 92  WGPLILCVSLALMLQKSSVEGKRDGGSPEFAEVFVIIWFGAVTITLNSKLLGGNISFFQS 151

Query: 122 VCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVSFLGDSQPVG 181
           +CVLGYC+LPL +++++CR++L A Q    F IR  + +  F W+  AS +FL D QP  
Sbjct: 152 LCVLGYCVLPLNIAMLICRLLLLAGQGPINFMIRLFVVLVMFAWSVIASTAFLADCQPPN 211

Query: 182 RKGLAVYPIFLFYFVIAWLILSHT 205
           RK LAVYP+FLFYFV++W+IL+ T
Sbjct: 212 RKALAVYPVFLFYFVVSWMILTFT 235

Rattus norvegicus (taxid: 10116)

>sp|Q54RZ2|YIPF6_DICDI Protein YIPF6 homolog OS=Dictyostelium discoideum GN=yipf6 PE=3 SV=2

 Score =  143 bits (361), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 80/183 (43%), Positives = 107/183 (58%), Gaps = 28/183 (15%)

Query: 42  NTLDEPIRTTIMRDLSAVG--------------------DLWGPLLLCTFMAIVLQGSSD 81
           NTLDEP+  TI+RDL  +G                    DLWGPL+LC  MAI L  S++
Sbjct: 8   NTLDEPVIQTILRDLKMIGFKLYHVILPRGNAANVLRDWDLWGPLILCLVMAIFLSISAE 67

Query: 82  ESINDGGPQFAEVFVIVWIGSGVVTLNSKLLGGNISFFQSVCVLGYCLLPLAMSLVLCRV 141
           E       +F  VFV+VW G+ +VT+N +LL GNISFFQSVC+LGYC+ PL ++ +    
Sbjct: 68  E---QKALEFTIVFVVVWCGAAIVTVNGQLLCGNISFFQSVCILGYCIFPLTIATI---- 120

Query: 142 ILFATQTNFLFFIRFLITMFGFGWATFASVSFLGDSQPVGRKGLAVYPIFLFYFVIAWLI 201
            +     NF   ++  I    + W++FAS  FLG S P  R+ LAVYP+ LFY VIAWL+
Sbjct: 121 -IIWIIQNFTMIVKLPIVGGAWFWSSFASYGFLGSSVPESRRLLAVYPVLLFYLVIAWLV 179

Query: 202 LSH 204
           +  
Sbjct: 180 VVQ 182

Dictyostelium discoideum (taxid: 44689)

>sp|Q9P6P8|YIP4_SCHPO Protein YIP4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC644.13c PE=1 SV=1

 Score =  118 bits (295), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/196 (36%), Positives = 105/196 (53%), Gaps = 32/196 (16%)

Query: 26  NIPG--INQNKATGHPEYNTLDEPIRTTIMRDLSAVG------------------DLWGP 65
           NI G  I + + TG    ++LDEPIR T+  +  A+G                  DLWGP
Sbjct: 40  NIAGESIVETRFTGG---DSLDEPIRVTLFNEFRAIGEKLVYVLYPKNAQVLRDWDLWGP 96

Query: 66  LLLCTFMAIVLQGSSDESINDGGPQFAEVFVIVWIGSGVVTLNSKLLGGNISFFQSVCVL 125
           L+    +A+ L  S+D+   +    F  V  ++W G  V +LN KLLG NIS FQS+C+L
Sbjct: 97  LIFSLVIALALALSTDKI--ERESVFTVVVALIWFGEAVCSLNIKLLGANISIFQSMCIL 154

Query: 126 GYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVSFLGDSQPVGRKGL 185
           GY   PL ++ ++C  +        L FIR  + +  + W  FA++  L +S    +K L
Sbjct: 155 GYSSFPLMIASIVCAFVP-------LIFIRIPVIVAMYAWTLFAAMGVLQNSNLSNKKLL 207

Query: 186 AVYPIFLFYFVIAWLI 201
           AVYP+FLFYF +AW+I
Sbjct: 208 AVYPLFLFYFSLAWII 223

May be involved in proper membrane localization of Rab GTPases.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q5ZJD7|YIPF4_CHICK Protein YIPF4 OS=Gallus gallus GN=YIPF4 PE=2 SV=1

 Score = 60.1 bits (144), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 21/138 (15%)

Query: 61  DLWGPLLLCTFMAIV-LQGSSDESINDGGPQFAEV--FVIVWI-GSGVVTLNSKLLGGNI 116
           D WGPL +  F +++ L G           QF  V   + +WI GS  + L +++LGG +
Sbjct: 119 DFWGPLAVVLFFSMISLYG-----------QFKVVSWIITIWIFGSLTIFLLARVLGGEV 167

Query: 117 SFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVSFLGD 176
           ++ Q + V+GY LLPL   +V+  V+L          +  LI +FG  WA +++ S L  
Sbjct: 168 AYGQVLGVIGYSLLPL---IVIAPVLLVVGSFEV---VSTLIKLFGVFWAAYSAASLLVG 221

Query: 177 SQPVGRKGLAVYPIFLFY 194
            +   +K L +YPIFL Y
Sbjct: 222 EEFKTKKPLLIYPIFLLY 239

Gallus gallus (taxid: 9031)

>sp|Q9BSR8|YIPF4_HUMAN Protein YIPF4 OS=Homo sapiens GN=YIPF4 PE=1 SV=1

 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 21/138 (15%)

Query: 61  DLWGPLLLCTFMAIV-LQGSSDESINDGGPQFAEV--FVIVWI-GSGVVTLNSKLLGGNI 116
           D WGPL +  F +++ L G           QF  V   + +WI GS  + L +++LGG +
Sbjct: 114 DFWGPLAVVLFFSMISLYG-----------QFRVVSWIITIWIFGSLTIFLLARVLGGEV 162

Query: 117 SFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVSFLGD 176
           ++ Q + V+GY LLPL   +V+  V+L          +  LI +FG  WA +++ S L  
Sbjct: 163 AYGQVLGVIGYSLLPL---IVIAPVLLVVGSFEV---VSTLIKLFGVFWAAYSAASLLVG 216

Query: 177 SQPVGRKGLAVYPIFLFY 194
            +   +K L +YPIFL Y
Sbjct: 217 EEFKTKKPLLIYPIFLLY 234

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	207
350417760	233	PREDICTED: protein YIPF6-like [Bombus im	0.942	0.836	0.645	4e-74
340729354	233	PREDICTED: protein YIPF6-like [Bombus te	0.942	0.836	0.640	1e-73
66548097	228	PREDICTED: protein YIPF6-like [Apis mell	0.942	0.855	0.635	6e-73
307197617	218	Protein YIPF6 [Harpegnathos saltator]	0.927	0.880	0.652	9e-73
307177660	220	Protein YIPF6 [Camponotus floridanus]	0.927	0.872	0.638	1e-72
332030271	219	Protein YIPF6 [Acromyrmex echinatior]	0.922	0.872	0.629	2e-71
345498364	230	PREDICTED: protein YIPF6-like [Nasonia v	0.898	0.808	0.649	4e-71
91081125	222	PREDICTED: similar to CG3652 CG3652-PA [	0.956	0.891	0.604	7e-70
157113407	226	integral membrane protein, putative [Aed	0.985	0.902	0.582	7e-70
223967989	224	CG3652-PA [Drosophila melanogaster] gi|2	0.903	0.834	0.638	8e-70

>gi|350417760|ref|XP_003491581.1| PREDICTED: protein YIPF6-like [Bombus impatiens]

 Score =  283 bits (723), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 140/217 (64%), Positives = 166/217 (76%), Gaps = 22/217 (10%)

Query: 10  RVTFYASETPQAEGSMNIPGINQNKATGHPEYNTLDEPIRTTIMRDLSAVG--------- 60
           +VT   ++    EG + + G  Q    G PE+NTLDEPIR TI+RD+ AVG         
Sbjct: 17  KVTMEYADPQNIEGELTVGG-KQKSNLGEPEFNTLDEPIRDTILRDVRAVGRKFYHVLYP 75

Query: 61  ----------DLWGPLLLCTFMAIVLQGSSD--ESINDGGPQFAEVFVIVWIGSGVVTLN 108
                     DLWGPL+LCTFMA++LQGSSD   + NDGGP+FAEVFVIVWIGS VVTLN
Sbjct: 76  KEKKCLLKEWDLWGPLVLCTFMAMILQGSSDTANNFNDGGPEFAEVFVIVWIGSMVVTLN 135

Query: 109 SKLLGGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATF 168
           SKLLGGNISFFQS+CVLGYCLLP A+SL+LCR+IL A QT FLF +RF+ITM GF WAT+
Sbjct: 136 SKLLGGNISFFQSICVLGYCLLPTAISLILCRIILMAEQTTFLFILRFVITMIGFMWATY 195

Query: 169 ASVSFLGDSQPVGRKGLAVYPIFLFYFVIAWLILSHT 205
           AS++FLGDSQPVG+K LAVYPIFLFYFVI+WL++SHT
Sbjct: 196 ASMAFLGDSQPVGKKALAVYPIFLFYFVISWLVISHT 232

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340729354|ref|XP_003402969.1| PREDICTED: protein YIPF6-like [Bombus terrestris]

 Score =  281 bits (720), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 139/217 (64%), Positives = 166/217 (76%), Gaps = 22/217 (10%)

Query: 10  RVTFYASETPQAEGSMNIPGINQNKATGHPEYNTLDEPIRTTIMRDLSAVG--------- 60
           +VT   ++    EG + + G  Q    G PE+NTLDEPIR TI+RD+ AVG         
Sbjct: 17  KVTMEYADPQNIEGELTVGG-KQKSNLGEPEFNTLDEPIRDTILRDVRAVGRKFYHVLYP 75

Query: 61  ----------DLWGPLLLCTFMAIVLQGSSD--ESINDGGPQFAEVFVIVWIGSGVVTLN 108
                     DLWGPL+LCTFMA++LQGSSD   + NDGGP+FAEVFVIVWIGS VVTLN
Sbjct: 76  KEKKCLLKEWDLWGPLVLCTFMAMILQGSSDTANNFNDGGPEFAEVFVIVWIGSMVVTLN 135

Query: 109 SKLLGGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATF 168
           SKLLGGNISFFQS+CVLGYCLLP A+SL+LCR+IL A QT FLF +RF+ITM GF WAT+
Sbjct: 136 SKLLGGNISFFQSICVLGYCLLPTAISLILCRIILMAEQTTFLFSLRFVITMIGFMWATY 195

Query: 169 ASVSFLGDSQPVGRKGLAVYPIFLFYFVIAWLILSHT 205
           AS++FLGDSQP+G+K LAVYPIFLFYFVI+WL++SHT
Sbjct: 196 ASMAFLGDSQPIGKKALAVYPIFLFYFVISWLVISHT 232

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66548097|ref|XP_397337.2| PREDICTED: protein YIPF6-like [Apis mellifera] gi|380017160|ref|XP_003692530.1| PREDICTED: protein YIPF6-like [Apis florea]

 Score =  279 bits (713), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 138/217 (63%), Positives = 163/217 (75%), Gaps = 22/217 (10%)

Query: 10  RVTFYASETPQAEGSMNIPGINQNKATGHPEYNTLDEPIRTTIMRDLSAVG--------- 60
           +VT   ++    EG + + G  Q    G PE+NTLDEPIR TI+RD+ AVG         
Sbjct: 12  KVTMEYADPQNIEGELTV-GAKQKSNLGEPEFNTLDEPIRDTILRDVRAVGKKFYHVLYP 70

Query: 61  ----------DLWGPLLLCTFMAIVLQGSSD--ESINDGGPQFAEVFVIVWIGSGVVTLN 108
                     DLWGPL+LCTFMA++LQGSSD   + NDGGP+FAEVFVIVWIGS VVTLN
Sbjct: 71  KEKKSLLKEWDLWGPLVLCTFMAMILQGSSDTANNFNDGGPEFAEVFVIVWIGSMVVTLN 130

Query: 109 SKLLGGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATF 168
            KLLGGNISFFQS+CVLGYCLLP A++L+LCR+IL   QT FLF +RF+ITM GF WAT+
Sbjct: 131 CKLLGGNISFFQSICVLGYCLLPTAIALILCRIILITEQTTFLFILRFIITMIGFMWATY 190

Query: 169 ASVSFLGDSQPVGRKGLAVYPIFLFYFVIAWLILSHT 205
           AS+ FLGDSQPVGRK LAVYPIFLFYFVI+WL++SHT
Sbjct: 191 ASMVFLGDSQPVGRKALAVYPIFLFYFVISWLVISHT 227

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307197617|gb|EFN78805.1| Protein YIPF6 [Harpegnathos saltator]

 Score =  278 bits (711), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 139/213 (65%), Positives = 160/213 (75%), Gaps = 21/213 (9%)

Query: 14  YASETPQAEGSMNIPGINQNKATGHPEYNTLDEPIRTTIMRDLSAVG------------- 60
           Y  +    EG M I G  Q    G PE+NTLDEPIR TI+RD+ AVG             
Sbjct: 7   YTVDPQHVEGEMTI-GAKQKSTLGEPEFNTLDEPIRDTILRDVRAVGKKFFHVLYPKEKK 65

Query: 61  ------DLWGPLLLCTFMAIVLQGSSDE-SINDGGPQFAEVFVIVWIGSGVVTLNSKLLG 113
                 DLWGPL+LCTFMA++LQGSSD    NDGGP+FAEVFVIVWIGS VVTLNSKLLG
Sbjct: 66  SLLKEWDLWGPLVLCTFMAMILQGSSDTPDSNDGGPEFAEVFVIVWIGSMVVTLNSKLLG 125

Query: 114 GNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVSF 173
           GNISFFQSVCVLGYCLLP A++L++CR+IL   QT  LF IRF+IT+ GF WAT+AS++F
Sbjct: 126 GNISFFQSVCVLGYCLLPTAIALIICRIILMVQQTTLLFIIRFVITVIGFLWATYASMAF 185

Query: 174 LGDSQPVGRKGLAVYPIFLFYFVIAWLILSHTV 206
           LGDSQPVGRK LAVYPIFLFY VI+WL++SHTV
Sbjct: 186 LGDSQPVGRKALAVYPIFLFYLVISWLVISHTV 218

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307177660|gb|EFN66706.1| Protein YIPF6 [Camponotus floridanus]

 Score =  278 bits (710), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 136/213 (63%), Positives = 161/213 (75%), Gaps = 21/213 (9%)

Query: 14  YASETPQAEGSMNIPGINQNKATGHPEYNTLDEPIRTTIMRDLSAVG------------- 60
           Y  +    EG M I    ++   G PE+NTLDEPIR TI+RD+ AVG             
Sbjct: 7   YTVDPQHIEGEMTIGTKQKSTTLGEPEFNTLDEPIRDTILRDVRAVGKKFFHVLYPKEKK 66

Query: 61  ------DLWGPLLLCTFMAIVLQGSSD--ESINDGGPQFAEVFVIVWIGSGVVTLNSKLL 112
                 DLWGPL+LCTFMA++LQGS+D  ++ NDGGP+FAEVFVIVWIGS VVTLNSKLL
Sbjct: 67  SLLKEWDLWGPLILCTFMAMILQGSTDAADNSNDGGPEFAEVFVIVWIGSMVVTLNSKLL 126

Query: 113 GGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVS 172
           GGNISFFQSVCVLGYCLLP A++L+LCR+IL   QT  LF +RF+ITM GF WAT+AS++
Sbjct: 127 GGNISFFQSVCVLGYCLLPTAIALILCRIILIVQQTTLLFILRFIITMIGFLWATYASMA 186

Query: 173 FLGDSQPVGRKGLAVYPIFLFYFVIAWLILSHT 205
           FLGDSQP GRK LAVYPIFLFYFVI+WL++SHT
Sbjct: 187 FLGDSQPTGRKALAVYPIFLFYFVISWLVISHT 219

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332030271|gb|EGI70045.1| Protein YIPF6 [Acromyrmex echinatior]

 Score =  273 bits (699), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 134/213 (62%), Positives = 161/213 (75%), Gaps = 22/213 (10%)

Query: 14  YASETPQAEGSMNIPGINQNKATGHPEYNTLDEPIRTTIMRDLSAVG------------- 60
           Y  +    EG M + G  Q    G PE+NTLDEPI+ TI+RD+ AVG             
Sbjct: 7   YVVDPQHVEGEMTV-GTKQRSTLGEPEFNTLDEPIKDTILRDVRAVGKKFFHVLYPKEKK 65

Query: 61  ------DLWGPLLLCTFMAIVLQGSSD--ESINDGGPQFAEVFVIVWIGSGVVTLNSKLL 112
                 DLWGPL+LCTFMA++LQGS+D  +S NDGGP+FAEVFVIVWIGS VVTLNSKLL
Sbjct: 66  SLLKEWDLWGPLILCTFMAMILQGSTDIADSSNDGGPEFAEVFVIVWIGSMVVTLNSKLL 125

Query: 113 GGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVS 172
           GGNISFFQSVCVLGYCLLP A++L+LCR+IL   Q++ LF +R +I+M GF WAT+AS++
Sbjct: 126 GGNISFFQSVCVLGYCLLPTAIALILCRIILIVQQSSLLFTLRLVISMIGFLWATYASMA 185

Query: 173 FLGDSQPVGRKGLAVYPIFLFYFVIAWLILSHT 205
           FLGDSQP GRK LAVYPIFLFYFVI+WL++SHT
Sbjct: 186 FLGDSQPTGRKALAVYPIFLFYFVISWLVISHT 218

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345498364|ref|XP_003428213.1| PREDICTED: protein YIPF6-like [Nasonia vitripennis]

 Score =  273 bits (698), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 135/208 (64%), Positives = 163/208 (78%), Gaps = 22/208 (10%)

Query: 20  QAEGSMNIPGINQNKAT-GHPEYNTLDEPIRTTIMRDLSAVG------------------ 60
              G M +    +N+AT G P++NTLDEPI+ TI+RD+ AVG                  
Sbjct: 22  NVHGEMTVGPNMRNQATLGEPDFNTLDEPIKVTILRDVRAVGRKFYHVLYPKEKKSLLKE 81

Query: 61  -DLWGPLLLCTFMAIVLQGSSD--ESINDGGPQFAEVFVIVWIGSGVVTLNSKLLGGNIS 117
            DLWGPL+LCTFMA++LQGSS+  +S NDGGP+FAEVFVIVWIGS +VTLNSKLLGGNIS
Sbjct: 82  WDLWGPLVLCTFMAMILQGSSETADSSNDGGPEFAEVFVIVWIGSMIVTLNSKLLGGNIS 141

Query: 118 FFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVSFLGDS 177
           FFQSVCVLGYCLLP A++L++CR+IL A QT  LF IRF+IT+ GFGWAT+AS++FLGDS
Sbjct: 142 FFQSVCVLGYCLLPTAIALIICRIILMAKQTVLLFAIRFIITVIGFGWATYASMAFLGDS 201

Query: 178 QPVGRKGLAVYPIFLFYFVIAWLILSHT 205
           QP GRK LAVYPIFLFYFVI+WL++SHT
Sbjct: 202 QPAGRKALAVYPIFLFYFVISWLVISHT 229

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91081125|ref|XP_975535.1| PREDICTED: similar to CG3652 CG3652-PA [Tribolium castaneum]

 Score =  268 bits (686), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 133/220 (60%), Positives = 162/220 (73%), Gaps = 22/220 (10%)

Query: 7   DQHRVTFYASETPQAEGSMNIPGINQNKATGHPEYNTLDEPIRTTIMRDLSAVG------ 60
           D  ++  +       EG M+IPG    ++ G P++NTLDEPIR TI+RDL AVG      
Sbjct: 2   DDTKLEMFDDVGGLVEGEMSIPGNKTTQSIGKPDFNTLDEPIRDTILRDLKAVGIKFSHV 61

Query: 61  -------------DLWGPLLLCTFMAIVLQGS--SDESINDGGPQFAEVFVIVWIGSGVV 105
                        DLWGPLLLCTFMA+VLQGS  +D+S NDGGP+FA VFVIVW+GS VV
Sbjct: 62  LFPKEKKTLLKEWDLWGPLLLCTFMAMVLQGSRTADDS-NDGGPEFAAVFVIVWVGSMVV 120

Query: 106 TLNSKLLGGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGW 165
           TLNSKLLGGNISFFQS+CVLGYCLLP  ++L++C+VIL    TN LFF+RF ++M GF W
Sbjct: 121 TLNSKLLGGNISFFQSICVLGYCLLPTTIALIVCKVILLLEHTNLLFFLRFSVSMVGFAW 180

Query: 166 ATFASVSFLGDSQPVGRKGLAVYPIFLFYFVIAWLILSHT 205
           AT+AS+ FLGDSQ  GRK LAVYPIFLFYF+I+WL++SHT
Sbjct: 181 ATYASIVFLGDSQKPGRKVLAVYPIFLFYFIISWLVISHT 220

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157113407|ref|XP_001657814.1| integral membrane protein, putative [Aedes aegypti] gi|108877744|gb|EAT41969.1| AAEL006450-PA [Aedes aegypti]

 Score =  268 bits (686), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 131/225 (58%), Positives = 164/225 (72%), Gaps = 21/225 (9%)

Query: 1   MASPGTDQHRVTFYASETPQAEGSMNIPGINQNKAT-GHPEYNTLDEPIRTTIMRDLSAV 59
           M+SP         YAS T   EG M++P   +N    G P ++TLDEPI+ T +RD+ AV
Sbjct: 1   MSSPEAKLELYDDYASATESMEGQMSVPNATRNTTDPGAPNFSTLDEPIKDTFLRDVKAV 60

Query: 60  G-------------------DLWGPLLLCTFMAIVLQGSSDESINDGGPQFAEVFVIVWI 100
           G                   DLWGPL+LCT MA +LQGS+D+ ++DGGPQFA+VFVIVWI
Sbjct: 61  GIKFYHVLIPREKNTLLRDWDLWGPLILCTLMATILQGSADD-VHDGGPQFAQVFVIVWI 119

Query: 101 GSGVVTLNSKLLGGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITM 160
           G+ +VTLNSKLLGGNISFFQSVCVLGYCL P A +L++CR+IL A QT+FLFF+R L+  
Sbjct: 120 GAMIVTLNSKLLGGNISFFQSVCVLGYCLTPCAAALLVCRIILIAEQTHFLFFLRLLVAG 179

Query: 161 FGFGWATFASVSFLGDSQPVGRKGLAVYPIFLFYFVIAWLILSHT 205
            GFGWAT+AS+ FLGDSQP+ RK LAVYPIFLFYF+I+WL++SH+
Sbjct: 180 VGFGWATYASIIFLGDSQPINRKALAVYPIFLFYFIISWLVVSHS 224

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|223967989|emb|CAR93725.1| CG3652-PA [Drosophila melanogaster] gi|223967999|emb|CAR93730.1| CG3652-PA [Drosophila melanogaster] gi|223968001|emb|CAR93731.1| CG3652-PA [Drosophila melanogaster]

 Score =  268 bits (686), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 134/210 (63%), Positives = 158/210 (75%), Gaps = 23/210 (10%)

Query: 18  TPQAEGSMNIPGINQNKAT---GHPEYNTLDEPIRTTIMRDLSAVG-------------- 60
           +P  EG M+IPG     AT   G PEYNTLDEPIR T++RD+ AVG              
Sbjct: 14  SPSLEGDMSIPGKRTTTATSASGAPEYNTLDEPIRETVLRDIRAVGIKFYHVLYPKEKSS 73

Query: 61  -----DLWGPLLLCTFMAIVLQGSSD-ESINDGGPQFAEVFVIVWIGSGVVTLNSKLLGG 114
                DLWGPL+LCTFMA +LQGSS  +S++D GP+FA+VFVIVWIG+ VVTLNSKLLGG
Sbjct: 74  LLRDWDLWGPLVLCTFMATILQGSSTADSMSDNGPEFAQVFVIVWIGAAVVTLNSKLLGG 133

Query: 115 NISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVSFL 174
           NISFFQSVCVLGYCL P+A+SL++CRVIL ATQT  LFF+RF+ T  GF WAT+AS  FL
Sbjct: 134 NISFFQSVCVLGYCLTPVAISLIVCRVILLATQTRLLFFLRFVTTTIGFAWATYASFVFL 193

Query: 175 GDSQPVGRKGLAVYPIFLFYFVIAWLILSH 204
           G SQP  RK LAVYPIFLF+F+I+WL+LSH
Sbjct: 194 GQSQPPHRKPLAVYPIFLFFFIISWLVLSH 223

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	207
FB|FBgn0031600	224	CG3652 [Drosophila melanogaste	0.806	0.745	0.656	1.4e-57
ZFIN|ZDB-GENE-040625-76	240	yipf6 "Yip1 domain family, mem	0.690	0.595	0.601	4.2e-55
UNIPROTKB|F1RZ19	235	LOC100738646 "Uncharacterized	0.811	0.714	0.552	6e-48
UNIPROTKB|G5E997	193	YIPF6 "Protein YIPF6" [Homo sa	0.903	0.968	0.510	7.7e-48
UNIPROTKB|E1BZJ1	234	YIPF6 "Uncharacterized protein	0.811	0.717	0.546	9.8e-48
UNIPROTKB|A6QLC6	236	YIPF6 "Protein YIPF6" [Bos tau	0.811	0.711	0.552	1.2e-47
UNIPROTKB|E2R1J1	236	YIPF6 "Uncharacterized protein	0.811	0.711	0.546	2e-47
UNIPROTKB|B1AV70	188	YIPF6 "Protein YIPF6" [Homo sa	0.888	0.978	0.513	2.6e-47
UNIPROTKB|Q96EC8	236	YIPF6 "Protein YIPF6" [Homo sa	0.811	0.711	0.540	5.4e-47
MGI|MGI:1925179	236	Yipf6 "Yip1 domain family, mem	0.811	0.711	0.543	8.8e-47

FB|FBgn0031600 CG3652 [Drosophila melanogaster (taxid:7227)]

 Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
 Identities = 113/172 (65%), Positives = 139/172 (80%)

Query:    34 KATGHPEYNTLDEPIRTTIMRDLSAVGDLWGPLLLCTFMAIVLQGSSD-ESINDGGPQFA 92
             +A G   Y+ L    +++++RD     DLWGPL+LCTFMA +LQGSS  +S++D GP+FA
Sbjct:    56 RAVGIKFYHVLYPKEKSSLLRDW----DLWGPLVLCTFMATILQGSSTADSMSDNGPEFA 111

Query:    93 EVFVIVWIGSGVVTLNSKLLGGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLF 152
             +VFVIVWIG+ VVTLNSKLLGGNISFFQSVCVLGYCL P+A+SL++CRVIL ATQT  LF
Sbjct:   112 QVFVIVWIGAAVVTLNSKLLGGNISFFQSVCVLGYCLTPVAISLIVCRVILLATQTRLLF 171

Query:   153 FIRFLITMFGFGWATFASVSFLGDSQPVGRKGLAVYPIFLFYFVIAWLILSH 204
             F+RF+ T  GF WAT+AS  FLG SQP  RK LAVYPIFLF+F+I+WL+LSH
Sbjct:   172 FLRFVTTTIGFAWATYASFVFLGQSQPPHRKPLAVYPIFLFFFIISWLVLSH 223

GO:0016020 "membrane" evidence=IEA

ZFIN|ZDB-GENE-040625-76 yipf6 "Yip1 domain family, member 6" [Danio rerio (taxid:7955)]

 Score = 494 (179.0 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
 Identities = 86/143 (60%), Positives = 110/143 (76%)

Query:    61 DLWGPLLLCTFMAIVLQGSSDESINDGGPQFAEVFVIVWIGSGVVTLNSKLLGGNISFFQ 120
             DLWGPLLLC  +A++LQG S +S  DG PQFAEVFVI+W GS ++TLNSKLLGG ISFFQ
Sbjct:    93 DLWGPLLLCVTLALMLQGGSADSEEDGRPQFAEVFVIIWFGSVIITLNSKLLGGTISFFQ 152

Query:   121 SVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVSFLGDSQPV 180
             S+CVLGYC+LPL +++++CR++L        F +R ++    F W+TFAS +FL DSQP 
Sbjct:   153 SLCVLGYCILPLTVAMIVCRIVLLGGSGVVSFAVRLIVVTASFSWSTFASTAFLADSQPT 212

Query:   181 GRKGLAVYPIFLFYFVIAWLILS 203
              RK L VYP+FLFYFVI W+IL+
Sbjct:   213 NRKALVVYPVFLFYFVIGWMILT 235

GO:0016020 "membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1RZ19 LOC100738646 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
 Identities = 95/172 (55%), Positives = 123/172 (71%)

Query:    34 KATGHPEYNTLDEPIRTTIMRDLSAVGDLWGPLLLCTFMAIVLQGSSDESINDGGPQFAE 93
             KA G    + L      T++RD     DLWGPL+LC  +A++LQ  S +S  DGGPQFAE
Sbjct:    67 KAVGKKFMHVLYPRKSNTLLRDW----DLWGPLILCVTLALMLQRGSVDSEKDGGPQFAE 122

Query:    94 VFVIVWIGSGVVTLNSKLLGGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFF 153
             VFVIVW G+  +TLNSKLLGGNISFFQS+CVLGYC+LPL +++++CR++L A Q    F 
Sbjct:   123 VFVIVWFGAVTITLNSKLLGGNISFFQSLCVLGYCILPLTVAMLVCRLVLLAEQGPINFM 182

Query:   154 IRFLITMFGFGWATFASVSFLGDSQPVGRKGLAVYPIFLFYFVIAWLILSHT 205
             +R  + +  F W+  AS +FL DSQP  RK LAVYP+FLFYFVI+W+IL+ T
Sbjct:   183 VRLFVVILMFAWSIVASTAFLADSQPPNRKALAVYPVFLFYFVISWMILTFT 234

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|G5E997 YIPF6 "Protein YIPF6" [Homo sapiens (taxid:9606)]

 Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
 Identities = 98/192 (51%), Positives = 131/192 (68%)

Query:    15 ASETPQAEGSMNI-PGINQNKATGHPEYNTLDEPIRTTIMRDLSAVGDLWGPLLLCTFMA 73
             A E+P   G+ +  P +   KA G    + L      T++RD     DLWGPL+LC  +A
Sbjct:     4 AEESPGDPGTASPRPLMRDLKAVGKKFMHVLYPRKSNTLLRDW----DLWGPLILCVTLA 59

Query:    74 IVLQGSSDESINDGGPQFAEVFVIVWIGSGVVTLNSKLLGGNISFFQSVCVLGYCLLPLA 133
             ++LQ  S +S  DGGPQFAEVFVIVW G+  +TLNSKLLGGNISFFQS+CVLGYC+LPL 
Sbjct:    60 LMLQRDSADSEKDGGPQFAEVFVIVWFGAVTITLNSKLLGGNISFFQSLCVLGYCILPLT 119

Query:   134 MSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVSFLGDSQPVGRKGLAVYPIFLF 193
             +++++CR++L A      F +R  + +  F W+  AS +FL DSQP  R+ LAVYP+FLF
Sbjct:   120 VAMLICRLVLLADPGPVNFMVRLFVVIVMFAWSIVASTAFLADSQPPNRRALAVYPVFLF 179

Query:   194 YFVIAWLILSHT 205
             YFVI+W+IL+ T
Sbjct:   180 YFVISWMILTFT 191

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|E1BZJ1 YIPF6 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
 Identities = 94/172 (54%), Positives = 124/172 (72%)

Query:    34 KATGHPEYNTLDEPIRTTIMRDLSAVGDLWGPLLLCTFMAIVLQGSSDESINDGGPQFAE 93
             KA G    + +     + ++RD     DLWGPL+LC  +A++LQG S +S  DGGPQFAE
Sbjct:    65 KAVGKKFVHVMYPKKSSALLRDW----DLWGPLVLCVSLALMLQGGSADSKEDGGPQFAE 120

Query:    94 VFVIVWIGSGVVTLNSKLLGGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFF 153
             VFVI+W G+ V+TLNSKLLGG ISFFQS+CVLGYC+LPL +++++CR++L A      F 
Sbjct:   121 VFVIIWFGAVVITLNSKLLGGTISFFQSLCVLGYCVLPLTVAMLVCRLVLLAGSGTVSFI 180

Query:   154 IRFLITMFGFGWATFASVSFLGDSQPVGRKGLAVYPIFLFYFVIAWLILSHT 205
             IR ++ +  F W+T AS +FL DSQP  RK L VYPIFLFYFVI+W+IL+ T
Sbjct:   181 IRLIVVIAMFAWSTLASTAFLADSQPPHRKALVVYPIFLFYFVISWMILTFT 232

GO:0016020 "membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

UNIPROTKB|A6QLC6 YIPF6 "Protein YIPF6" [Bos taurus (taxid:9913)]

 Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 95/172 (55%), Positives = 122/172 (70%)

Query:    34 KATGHPEYNTLDEPIRTTIMRDLSAVGDLWGPLLLCTFMAIVLQGSSDESINDGGPQFAE 93
             KA G    + L      T++RD     DLWGPL+LC  +A++LQ  S +S  DGGPQFAE
Sbjct:    67 KAVGKKFMHVLYPRKSNTLLRDW----DLWGPLILCVTLALMLQRGSVDSEKDGGPQFAE 122

Query:    94 VFVIVWIGSGVVTLNSKLLGGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFF 153
             VFVIVW G+  +TLNSKLLGGNISFFQS+CVLGYC+LPL M++++CR++L A      F 
Sbjct:   123 VFVIVWFGAVTITLNSKLLGGNISFFQSLCVLGYCILPLTMAMLVCRLVLLAEPGPVNFM 182

Query:   154 IRFLITMFGFGWATFASVSFLGDSQPVGRKGLAVYPIFLFYFVIAWLILSHT 205
             +R  + +  F W+  AS +FL DSQP  RK LAVYP+FLFYFVI+W+IL+ T
Sbjct:   183 VRLFVVIIMFAWSIVASTAFLADSQPPNRKALAVYPVFLFYFVISWMILTFT 234

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E2R1J1 YIPF6 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
 Identities = 94/172 (54%), Positives = 123/172 (71%)

Query:    34 KATGHPEYNTLDEPIRTTIMRDLSAVGDLWGPLLLCTFMAIVLQGSSDESINDGGPQFAE 93
             KA G    + L      T++RD     DLWGPL+LC  +A++LQ SS +S  DGGPQFAE
Sbjct:    67 KAVGKKFMHVLYPRKSNTLLRDW----DLWGPLILCVTLALMLQRSSVDSEKDGGPQFAE 122

Query:    94 VFVIVWIGSGVVTLNSKLLGGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFF 153
             VFVIVW G+  +TLNSKLLGGNISFFQS+CVLGYC+LPL +++++CR++L A      F 
Sbjct:   123 VFVIVWFGAVTITLNSKLLGGNISFFQSLCVLGYCILPLTVAMLVCRLVLLAEPGPVNFM 182

Query:   154 IRFLITMFGFGWATFASVSFLGDSQPVGRKGLAVYPIFLFYFVIAWLILSHT 205
             +R  + +  F W+  AS +FL DSQP  RK LA+YP+FLFYFVI+W+IL+ T
Sbjct:   183 VRLFVVIVMFAWSIVASTAFLADSQPPNRKALAIYPVFLFYFVISWMILTFT 234

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|B1AV70 YIPF6 "Protein YIPF6" [Homo sapiens (taxid:9606)]

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 97/189 (51%), Positives = 129/189 (68%)

Query:    15 ASETPQAEGSMNI-PGINQNKATGHPEYNTLDEPIRTTIMRDLSAVGDLWGPLLLCTFMA 73
             A E+P   G+ +  P +   KA G    + L      T++RD     DLWGPL+LC  +A
Sbjct:     4 AEESPGDPGTASPRPLMRDLKAVGKKFMHVLYPRKSNTLLRDW----DLWGPLILCVTLA 59

Query:    74 IVLQGSSDESINDGGPQFAEVFVIVWIGSGVVTLNSKLLGGNISFFQSVCVLGYCLLPLA 133
             ++LQ  S +S  DGGPQFAEVFVIVW G+  +TLNSKLLGGNISFFQS+CVLGYC+LPL 
Sbjct:    60 LMLQRDSADSEKDGGPQFAEVFVIVWFGAVTITLNSKLLGGNISFFQSLCVLGYCILPLT 119

Query:   134 MSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVSFLGDSQPVGRKGLAVYPIFLF 193
             +++++CR++L A      F +R  + +  F W+  AS +FL DSQP  R+ LAVYP+FLF
Sbjct:   120 VAMLICRLVLLADPGPVNFMVRLFVVIVMFAWSIVASTAFLADSQPPNRRALAVYPVFLF 179

Query:   194 YFVIAWLIL 202
             YFVI+W+IL
Sbjct:   180 YFVISWMIL 188

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|Q96EC8 YIPF6 "Protein YIPF6" [Homo sapiens (taxid:9606)]

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 93/172 (54%), Positives = 122/172 (70%)

Query:    34 KATGHPEYNTLDEPIRTTIMRDLSAVGDLWGPLLLCTFMAIVLQGSSDESINDGGPQFAE 93
             KA G    + L      T++RD     DLWGPL+LC  +A++LQ  S +S  DGGPQFAE
Sbjct:    67 KAVGKKFMHVLYPRKSNTLLRDW----DLWGPLILCVTLALMLQRDSADSEKDGGPQFAE 122

Query:    94 VFVIVWIGSGVVTLNSKLLGGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFF 153
             VFVIVW G+  +TLNSKLLGGNISFFQS+CVLGYC+LPL +++++CR++L A      F 
Sbjct:   123 VFVIVWFGAVTITLNSKLLGGNISFFQSLCVLGYCILPLTVAMLICRLVLLADPGPVNFM 182

Query:   154 IRFLITMFGFGWATFASVSFLGDSQPVGRKGLAVYPIFLFYFVIAWLILSHT 205
             +R  + +  F W+  AS +FL DSQP  R+ LAVYP+FLFYFVI+W+IL+ T
Sbjct:   183 VRLFVVIVMFAWSIVASTAFLADSQPPNRRALAVYPVFLFYFVISWMILTFT 234

GO:0016021 "integral to membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

MGI|MGI:1925179 Yipf6 "Yip1 domain family, member 6" [Mus musculus (taxid:10090)]

 Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
 Identities = 94/173 (54%), Positives = 123/173 (71%)

Query:    34 KATGHPEYNTLDEPIRTTIMRDLSAVGDLWGPLLLCTFMAIVLQGSSDESINDGG-PQFA 92
             KA G    + L       ++RD     DLWGPL+LC  +A++LQ SS +  NDGG P+FA
Sbjct:    67 KAVGRKFMHVLYPRKSNALLRDW----DLWGPLILCVTLALMLQKSSIDGKNDGGGPEFA 122

Query:    93 EVFVIVWIGSGVVTLNSKLLGGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLF 152
             EVFVI+W G+  +TLNSKLLGGNISFFQS+CVLGYC+LPL +++++CR++L A Q    F
Sbjct:   123 EVFVIIWFGAVTITLNSKLLGGNISFFQSLCVLGYCILPLNIAMLICRLLLLAGQGPINF 182

Query:   153 FIRFLITMFGFGWATFASVSFLGDSQPVGRKGLAVYPIFLFYFVIAWLILSHT 205
              IR  + +  F W+  AS +FL DSQP  RK LAVYP+FLFYFVI+W+IL+ T
Sbjct:   183 MIRLFVVLLMFAWSVVASTAFLADSQPPNRKALAVYPVFLFYFVISWMILTFT 235

GO:0005801 "cis-Golgi network" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030134 "ER to Golgi transport vesicle" evidence=IDA

GO:0042802 "identical protein binding" evidence=IDA

GO:0060576 "intestinal epithelial cell development" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6IQ85	YIPF6_DANRE	No assigned EC number	0.5120	0.8937	0.7708	yes	N/A
Q96EC8	YIPF6_HUMAN	No assigned EC number	0.4780	0.9661	0.8474	yes	N/A
A6QLC6	YIPF6_BOVIN	No assigned EC number	0.4824	0.9661	0.8474	yes	N/A
Q8BR70	YIPF6_MOUSE	No assigned EC number	0.5294	0.8743	0.7669	yes	N/A
Q9P6P8	YIP4_SCHPO	No assigned EC number	0.3673	0.7922	0.7288	yes	N/A
Q4QQU5	YIPF6_RAT	No assigned EC number	0.5098	0.8743	0.7669	yes	N/A
Q28CH8	YIPF6_XENTR	No assigned EC number	0.5124	0.8647	0.7682	yes	N/A
Q54RZ2	YIPF6_DICDI	No assigned EC number	0.4371	0.7487	0.8516	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	207
COG5080	227	COG5080, YIP1, Rab GTPase interacting factor, Golg	8e-21
pfam04893	171	pfam04893, Yip1, Yip1 domain	1e-05

>gnl|CDD|227412 COG5080, YIP1, Rab GTPase interacting factor, Golgi membrane protein [Intracellular trafficking and secretion]

 Score = 86.0 bits (213), Expect = 8e-21
 Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 15/150 (10%)

Query: 55  DLSAVGDLWGPLLLCTFMAIVLQGSSDESINDGGPQFAEVFVIVWIGSGVVTLNSKLLGG 114
           D+ A  DLWGPL+     ++ L          G   F  ++ I   G+  + L  +LLG 
Sbjct: 89  DILADCDLWGPLIFILLYSLFL-------SLAGKSHFGYIYGISLFGTLSLHLLLRLLGH 141

Query: 115 -NISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFA-SVS 172
            NISFF ++ +LGY LLPL  + ++  ++       ++    FLI      W+T+A S  
Sbjct: 142 KNISFFSTISILGYSLLPLVFNSLVSIILGRILILGYVVVALFLI------WSTYAASGV 195

Query: 173 FLGDSQPVGRKGLAVYPIFLFYFVIAWLIL 202
                Q   ++ L VYP+ LFY V A +I 
Sbjct: 196 LKSKLQLSNKRLLVVYPLLLFYNVFAIIIK 225

Length = 227

>gnl|CDD|218316 pfam04893, Yip1, Yip1 domain

 Score = 44.0 bits (104), Expect = 1e-05
 Identities = 21/105 (20%), Positives = 51/105 (48%), Gaps = 5/105 (4%)

Query: 94  VFVIVWIGSGVVTLNSKLLGGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFF 153
           + + +++ + ++ L +KL GG+ SF Q++ ++GY LLPL +  ++  ++        L  
Sbjct: 72  LLLGLFLLALLLHLIAKLFGGDGSFKQTLSLVGYALLPLILGGLIALLLSL-----LLGA 126

Query: 154 IRFLITMFGFGWATFASVSFLGDSQPVGRKGLAVYPIFLFYFVIA 198
           +  L+ +    W+ +     L  +  + +K   +  + L   +I 
Sbjct: 127 LLLLVGLLALIWSLYLLYLGLKAAHGLSKKKALLVALLLLLLLIV 171

The Yip1 integral membrane domain contains four transmembrane alpha helices. The domain is characterized by the motifs DLYGP and GY. The Yip1 protein is a golgi protein involved in vesicular transport that interacts with GTPases. Length = 171

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	207
KOG2946|consensus	234		100.0
KOG3103|consensus	249		100.0
COG5080	227	YIP1 Rab GTPase interacting factor, Golgi membrane	100.0
PF04893	172	Yip1: Yip1 domain; InterPro: IPR006977 This entry	98.13
KOG3114|consensus	290		97.26
PF06930	170	DUF1282: Protein of unknown function (DUF1282); In	82.58

>KOG2946|consensus

Probab=100.00  E-value=7.3e-49  Score=334.62  Aligned_cols=175  Identities=50%  Similarity=0.968  Sum_probs=153.4

Q ss_pred             ccccccCCCCCCCC-----CCCCCCCCCCCcchhHHHhhhhhhhh-----------------------hhhhHHHHHHHH
Q psy15048         21 AEGSMNIPGINQNK-----ATGHPEYNTLDEPIRTTIMRDLSAVG-----------------------DLWGPLLLCTFM   72 (207)
Q Consensus        21 ~~g~i~~~~~~~~~-----~~~~~~~~TLDEPv~~Tl~rDl~~I~-----------------------DLwGPLif~l~l   72 (207)
                      +|++...|++..+.     .+...++||||||+|||++||+++|+                       |||||+++|+.+
T Consensus        31 ~~~~~~~p~~~a~n~g~g~~~~~~e~dTldePv~~tlkrD~~~I~~kl~~Vl~P~py~~dk~~~lRDwDlWGPl~~~~~l  110 (234)
T KOG2946|consen   31 VEAPASAPGNSAGNSGFGWLLEVNEEDTLDEPVLETLKRDLRAIGSKLKHVLYPHPYFEDKGQLLRDWDLWGPLFFCVFL  110 (234)
T ss_pred             ccCCCCCCcccccccCcccccccCCCCcccchHHHHHHHHHHHHHhceEEEEccCCCcccccceeecccccchhHHHHHH
Confidence            55666666443221     22455789999999999999999999                       999999999999


Q ss_pred             HHHHhCCCCCccCCCCCeEEEEeehhHHHHHHHHHHHhhhcCCcchhhhhHhhhhchHHHHHHH-HHHHHHhhhccchhH
Q psy15048         73 AIVLQGSSDESINDGGPQFAEVFVIVWIGSGVVTLNSKLLGGNISFFQSVCVLGYCLLPLAMSL-VLCRVILFATQTNFL  151 (207)
Q Consensus        73 a~~L~~~~~~~~~~gk~~F~~if~i~~iGs~vv~ln~~LLgg~isf~q~vsvLGYcLlPlvi~a-~i~~~v~~~~~~~~~  151 (207)
                      |++|++++..+   ..++|+.+|.+.|+|++++|+|.||+||+|||+|++|++|||++|+++++ ++|.+       +..
T Consensus       111 a~iL~~s~~~~---~~~vFs~vf~i~wfG~~vvtln~kLLGgnIs~fQsl~IlGYCLfPl~v~ali~~~~-------~~l  180 (234)
T KOG2946|consen  111 ALILSLSGSVK---SASVFAVVFAILWFGAVVVTLNIKLLGGNISFFQSLCILGYCLFPLVVAALIICLF-------RDL  180 (234)
T ss_pred             HHHHHhhcCcc---cchhHHHHHHHHHHHHHHHHHHHHHhCCceeEEeehhhhhhcccHHHHHHHHHHHH-------HHH
Confidence            99999985321   23799999999999999999999999999999999999999999999998 44433       346


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCCCCceEEeecchHHHHHHHHHHhhccc
Q psy15048        152 FFIRFLITMFGFGWATFASVSFLGDSQPVGRKGLAVYPIFLFYFVIAWLILSHT  205 (207)
Q Consensus       152 ~~~r~il~~~~v~WSt~as~~fl~~~~~~~rk~L~~YPi~LfY~~~a~Lvi~~~  205 (207)
                      +++|+++..++.+||+|||+.|+..+++++||.|++||+||||+.++|+++.|+
T Consensus       181 ~~lr~vv~~~~~~WSsyaa~~~l~~~~~~~kk~LavYPvFL~y~~~s~lii~~n  234 (234)
T KOG2946|consen  181 FFLRLVVTSIGLAWSSYAAMGFLSISQLPRKKLLAVYPVFLFYFSVSWLIISHN  234 (234)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhccccccccceehhhHHHHHHhhheEEEecC
Confidence            799999999999999999999999999999999999999999999999999886

>KOG3103|consensus

Probab=100.00  E-value=1.2e-40  Score=286.80  Aligned_cols=146  Identities=27%  Similarity=0.460  Sum_probs=136.2

Q ss_pred             CcchhHHHhhhhhhhh---------------------hhhhHHHHHHHHHHHHhCCCCCccCCCCCeEEEEeehhHHHHH
Q psy15048         45 DEPIRTTIMRDLSAVG---------------------DLWGPLLLCTFMAIVLQGSSDESINDGGPQFAEVFVIVWIGSG  103 (207)
Q Consensus        45 DEPv~~Tl~rDl~~I~---------------------DLwGPLif~l~la~~L~~~~~~~~~~gk~~F~~if~i~~iGs~  103 (207)
                      |||++|||++|+++|+                     |||||++||++++++|+++       ||.||||||+++.+||+
T Consensus        81 EpPLLEELgInf~hI~~KT~~VLnP~r~~~q~i~~d~DlaGPlvf~L~f~~flLl~-------gKi~FgyIygi~~~gsl  153 (249)
T KOG3103|consen   81 EPPLLEELGINFDHIKQKTRAVLNPFRSADQSIMKDTDLAGPLVFCLLFGLFLLLA-------GKIHFGYIYGISLLGSL  153 (249)
T ss_pred             CCchHHHhCCCHHHHHHHHhheecccccCceEEecCcccccchHHHHHHHHHHHhc-------CceEEEEEeeeHHHHHH
Confidence            5789999999999999                     9999999999999999998       99999999999999999


Q ss_pred             HHHHHHhhhc-CCcchhhhhHhhhhchHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH-HHHhhcccCCCC
Q psy15048        104 VVTLNSKLLG-GNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFA-SVSFLGDSQPVG  181 (207)
Q Consensus       104 vv~ln~~LLg-g~isf~q~vsvLGYcLlPlvi~a~i~~~v~~~~~~~~~~~~r~il~~~~v~WSt~a-s~~fl~~~~~~~  181 (207)
                      .+|+++|+|+ ++++|.+++||+|||++|+|+.|.++.++.  .+    ..+|++++.++++||+|| |+.|++..++++
T Consensus       154 ~iy~L~nlm~~~nv~f~~~aSVlGYcLLPlvvlS~v~i~~~--~~----g~vg~il~~~~v~W~t~aaS~lfv~al~~~~  227 (249)
T KOG3103|consen  154 SIYFLLNLMSNKNVSFGCVASVLGYCLLPLVVLSFVNIFVG--LQ----GTVGYILSALFVLWCTYAASKLFVSALSMEN  227 (249)
T ss_pred             HHHHHHHHHhhcCcceeeehHHHHHHHHHHHHHHHHHHHHh--cc----chHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            9999999999 999999999999999999999999998874  33    489999999999999997 555556689999


Q ss_pred             ceEEeecchHHHHHHHHHHhhc
Q psy15048        182 RKGLAVYPIFLFYFVIAWLILS  203 (207)
Q Consensus       182 rk~L~~YPi~LfY~~~a~Lvi~  203 (207)
                      ||.|++|||+|+|.+|+|+++.
T Consensus       228 ~rlLiaYp~~l~Y~~Fall~if  249 (249)
T KOG3103|consen  228 QRLLVAYPCALLYGVFALIVIF  249 (249)
T ss_pred             cchhhhhHHHHHHhhheeEEeC
Confidence            9999999999999999999863

>COG5080 YIP1 Rab GTPase interacting factor, Golgi membrane protein [Intracellular trafficking and secretion]

Probab=100.00  E-value=9.8e-41  Score=283.04  Aligned_cols=151  Identities=30%  Similarity=0.554  Sum_probs=135.9

Q ss_pred             CCCCCCcchhHHHhhhhhhhh---------------------hhhhHHHHHHHHHHHHhCCCCCccCCCCCeEEEEeehh
Q psy15048         40 EYNTLDEPIRTTIMRDLSAVG---------------------DLWGPLLLCTFMAIVLQGSSDESINDGGPQFAEVFVIV   98 (207)
Q Consensus        40 ~~~TLDEPv~~Tl~rDl~~I~---------------------DLwGPLif~l~la~~L~~~~~~~~~~gk~~F~~if~i~   98 (207)
                      +....|||++||+.+|+.+|.                     ||||||+||+++++.|+++       +|.||||||++.
T Consensus        53 g~~p~d~pLleel~i~F~~i~~ks~~vl~p~~~~~~~i~~d~DL~gPliF~lL~sLfLsla-------~~shFgyiy~is  125 (227)
T COG5080          53 GVYPGDPPLLEELGINFGHIKSKSDDVLGPFDNKAFDILADCDLWGPLIFILLYSLFLSLA-------GKSHFGYIYGIS  125 (227)
T ss_pred             CCCCCCccHHHHhcccccccccccceeeecccccchhhhhcccccccHHHHHHHHHHHHhc-------ccceeehhhHHH
Confidence            557889999999999999998                     9999999999999999997       899999999999


Q ss_pred             HHHHHHHHHHHhhhc-CCcchhhhhHhhhhchHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhh-cc
Q psy15048         99 WIGSGVVTLNSKLLG-GNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVSFL-GD  176 (207)
Q Consensus        99 ~iGs~vv~ln~~LLg-g~isf~q~vsvLGYcLlPlvi~a~i~~~v~~~~~~~~~~~~r~il~~~~v~WSt~as~~fl-~~  176 (207)
                      |+|.+++++++|||| ++++|+|++||+|||+||+|+.|+++.++.     +.....+ +++.++.+||+||++.++ +.
T Consensus       126 lfg~lsl~~~lrLl~~~ni~f~~~~SIlGYs~lPlv~~slv~~i~~-----~i~i~~~-vv~~l~~~Ws~~AaS~v~~~~  199 (227)
T COG5080         126 LFGTLSLHLLLRLLGHKNISFFSTISILGYSLLPLVFNSLVSIILG-----RILILGY-VVVALFLIWSTYAASGVLKSK  199 (227)
T ss_pred             HHHHHHHHHHHHHhccCceeeeehhHHhhhhHHHHHHHHHHHHHHH-----HHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999 999999999999999999999999999875     2333344 444559999999866666 47


Q ss_pred             cCCCCceEEeecchHHHHHHHHHHhhc
Q psy15048        177 SQPVGRKGLAVYPIFLFYFVIAWLILS  203 (207)
Q Consensus       177 ~~~~~rk~L~~YPi~LfY~~~a~Lvi~  203 (207)
                      ++.++||.+++||++|||.+|+|+++.
T Consensus       200 l~l~n~~llv~Ypl~LFY~~fa~ii~f  226 (227)
T COG5080         200 LQLSNKRLLVVYPLLLFYNVFAIIIKF  226 (227)
T ss_pred             HhhhhHHHHHHHHHHHHHhhheEEEEe
Confidence            899999999999999999999998865

>PF04893 Yip1: Yip1 domain; InterPro: IPR006977 This entry contains proteins belonging to the Yip1 family and represents the Yip1 domain

Probab=98.13  E-value=1.3e-05  Score=63.49  Aligned_cols=131  Identities=19%  Similarity=0.242  Sum_probs=81.9

Q ss_pred             hHHHhhhhh--hhhhhhhHHHHHHHHHHHHhCCCC-----C-----ccCCCCCeEEEEe-------ehhHHHHHHHHHHH
Q psy15048         49 RTTIMRDLS--AVGDLWGPLLLCTFMAIVLQGSSD-----E-----SINDGGPQFAEVF-------VIVWIGSGVVTLNS  109 (207)
Q Consensus        49 ~~Tl~rDl~--~I~DLwGPLif~l~la~~L~~~~~-----~-----~~~~gk~~F~~if-------~i~~iGs~vv~ln~  109 (207)
                      .|+++++-+  +..|++++++.++.+...+.....     +     +..+....++.++       ....+.+...+...
T Consensus         9 f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~   88 (172)
T PF04893_consen    9 FRRLRESPRISKSWWLPLLLVILLTLVFGLLSSLNIPWYVDSGGSAYMFSFGSLLGSIIGGFIIILIGWFILALILHLIA   88 (172)
T ss_pred             HHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344444443  334999999988877655444310     0     0001122222222       12235555567788


Q ss_pred             hhhcCCcchhhhhHhhhhchHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhcc-cCCCCceE
Q psy15048        110 KLLGGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATFASVSFLGD-SQPVGRKG  184 (207)
Q Consensus       110 ~LLgg~isf~q~vsvLGYcLlPlvi~a~i~~~v~~~~~~~~~~~~r~il~~~~v~WSt~as~~fl~~-~~~~~rk~  184 (207)
                      |++||+.++.++.|+.||+..|.++..+++.+...     ...........++..|+.+.....++. .+.+.+|.
T Consensus        89 ~~~gg~~~~~~~~~~~~ya~~P~~~~~~~~~~~~~-----~~~~~~~~~~~l~~iw~~~l~~~gl~~~~~~~~~ka  159 (172)
T PF04893_consen   89 KLFGGKGSFKETFSVVGYALIPLLLGSLISIILSL-----FFGPLSLLVIILFSIWSAYLLVIGLREVHRLSRGKA  159 (172)
T ss_pred             HHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHH
Confidence            88999999999999999999999999998876532     111234566788999999986666654 45444443

The Yip1 integral membrane domain contains four transmembrane alpha helices. The domain is characterised by the motifs DLYGP and GY. The Yip1 protein is a golgi protein involved in vesicular transport that interacts with GTPases [].; GO: 0016020 membrane

>KOG3114|consensus

Probab=97.26  E-value=0.0018  Score=58.40  Aligned_cols=78  Identities=22%  Similarity=0.333  Sum_probs=49.8

Q ss_pred             hhhhHHHHHHHHHHHHhCCCC------CccCCCCCeEEE-----------EeehhHHHHHHHHHHHhhhc-----CCcch
Q psy15048         61 DLWGPLLLCTFMAIVLQGSSD------ESINDGGPQFAE-----------VFVIVWIGSGVVTLNSKLLG-----GNISF  118 (207)
Q Consensus        61 DLwGPLif~l~la~~L~~~~~------~~~~~gk~~F~~-----------if~i~~iGs~vv~ln~~LLg-----g~isf  118 (207)
                      ||+||+.+|.++.+.+..+.+      .....| .+-++           +|+..|+-.+.++-.++..+     ...++
T Consensus       114 DLYGPfWI~~TlVf~l~~~g~~~~~i~~~t~~g-~~~g~~f~~v~saa~~iy~Y~~ivp~~l~~iL~~~~~~~~~~~~~l  192 (290)
T KOG3114|consen  114 DLYGPFWITATLVFALAISGNLATFIRNGTLKG-TAYGYDFGLVTSAATLIYGYLTIVPLALWGILSWNGYSLLLHCYVL  192 (290)
T ss_pred             cccccHHHHHHHHHHHHHcccHHHHHHhccccc-eeeecccchHHHHHHHHHHHHHHHHHHHHHHHHhccccccccceeh
Confidence            999999999999988776532      111112 13343           34444444444444333333     45788


Q ss_pred             hhhhHhhhhchHHHHHHHHHH
Q psy15048        119 FQSVCVLGYCLLPLAMSLVLC  139 (207)
Q Consensus       119 ~q~vsvLGYcLlPlvi~a~i~  139 (207)
                      +-.+|+-||++++.....++.
T Consensus       193 ~~~~~iygysl~i~ip~~vl~  213 (290)
T KOG3114|consen  193 LELVCIYGYSLFIFIPLLVLW  213 (290)
T ss_pred             hhHHHHHhhHHHHHHHHHHHH
Confidence            899999999999999844443

>PF06930 DUF1282: Protein of unknown function (DUF1282); InterPro: IPR009698 This entry represents several hypothetical proteins of around 200 residues in length

Probab=82.58  E-value=11  Score=30.84  Aligned_cols=51  Identities=16%  Similarity=0.389  Sum_probs=38.3

Q ss_pred             hhhcCCcchhhhhHhhhhchHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHH
Q psy15048        110 KLLGGNISFFQSVCVLGYCLLPLAMSLVLCRVILFATQTNFLFFIRFLITMFGFGWATF  168 (207)
Q Consensus       110 ~LLgg~isf~q~vsvLGYcLlPlvi~a~i~~~v~~~~~~~~~~~~r~il~~~~v~WSt~  168 (207)
                      |-.+++-++-++.-..+|...|+.+..+++....        .+.......++..|+.+
T Consensus        88 ~~~~~~~s~~~~~~~a~y~~tPl~L~~i~~~~~~--------~~l~~~~~~~~~~~~~~  138 (170)
T PF06930_consen   88 KTFGGRPSYKKCLAFAAYAATPLFLGGIVNLYPS--------LWLTLLVGLIALIYSVY  138 (170)
T ss_pred             HHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHH
Confidence            3335788999999999999999999888876543        23344566777788865

The function of is unknown although a number of the members are thought to be putative membrane proteins.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00