Psyllid ID: psy15068

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710
Protein Sequence
MIEEISHRRNSGLVHSVKESSYRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYSFLERLEEVLTE
Secondary Structure (PSIPRED)
cHHHHHcccccccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHHcccccccccHHHHHHHHHccccccccccccccHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHcccHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHccccHHHHHHHHHHcccccccccccccccHHHHHHHccccHHHHHHHHccHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHccccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHccccccccccccccccccccccHHHHHHHcccHHHHHHHHHccccccccHHHHHHHccccHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cHHHHHccccccccHHHHHHcccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHcccccccccccccccHHHHHHHHccHHHHHHHHHHcccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccccHccHHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHcccHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHccccHHHHHHHHHHccccccccccccccHHHHHHHcccccHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccccHcHcccccccHHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccHHHHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHccccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHccccccccccccccHHHHHHHccHHHHHHHHHHccccHHHHHcccccccHHHHHHHccccHHHHHHHHHcc
Coil and Loop (DISEMBL)
mieeishrrnsglvhsvkessyrhhhlfseimfseEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLStgdhdvnekLQDGRTALYMAILQGLYKMVTLLIHhganvndrdekgytplhLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVsanmsedstdTNEIISMLIENganvrekmpftdfsplHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNsknfdvsisdgdlnSLLHKACHVGNLQIVQMLVKRkfdinaqnryflppmffaigmgrKHTHVAEYLLQQdsinvnlpikrpnllldtvmslkdpkvmsQTQIKRLDQIIKRIIDRTeninaegddmiTPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFisdarssdFCFRSALQYACKHKNNIEMVKLLLLHgadvndtsnkpkqkplAVAIQSGDFQIVKELQNYgaqidkenYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDevkkniedgacvnvsserrGSALIYVAWKGYEEIVDLLLDngadvnfksatgFTALHMACRFHSNDNIVRKLLHhgayydmkdgktgktplkhaeagknrdIIDLLHLIDNLfasvtnpydpnvyHRIELMNSAKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYSFLERLEEVLTE
Flexible Loop (DISEMBL)
mieeishrrnsglvhsvkessyrHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLlstgdhdvnEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILavsanmsedsTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLkdpkvmsqtqikrldQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAhstteleerkkINDLLKLNLDFLKNVrsnkydevkkniedgacvnvsserrgSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYSFLERLEEVLTE
Low Complexity Region (SEG)
MIEEISHRRNSGLVHSVKESSYRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERkkindllklnldflknVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRdiidllhlidNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYSFLERLEEVLTE
Disordered region (IsUnstruct)
*********************YRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSA*********NEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADV***********LAVAIQSGDFQIVKELQNYGAQIDKENYLKN****RI**********KKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKD************AGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYSFLERL******
Disordered Region (DISOPRED)
MIEEISHRRNSGLVHSVKESSYRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYSFLERLEEVLTE
Disordered Region (DISEMBL)
*************VHSVKESSYRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYSFLERLEEVLTE
Disordered Region (DISPRO)
MIEEISHRRNSGLVHSVKESSYRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYSFLERLEEVLTE
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIEEISHRRNSGLVHSVKESSYRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYSFLERLEEVLTE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	710	2.2.26 [Sep-21-2011]
G5E8K5	1961	Ankyrin-3 OS=Mus musculus	no	N/A	0.732	0.265	0.278	2e-33
Q12955	4377	Ankyrin-3 OS=Homo sapiens	no	N/A	0.732	0.118	0.281	5e-33
Q4UMH6	1179	Putative ankyrin repeat p	yes	N/A	0.559	0.336	0.300	4e-29
P16157	1881	Ankyrin-1 OS=Homo sapiens	no	N/A	0.767	0.289	0.273	7e-29
Q02357	1862	Ankyrin-1 OS=Mus musculus	no	N/A	0.756	0.288	0.275	6e-28
Q8C8R3	3898	Ankyrin-2 OS=Mus musculus	no	N/A	0.807	0.146	0.242	9e-28
Q01484	3957	Ankyrin-2 OS=Homo sapiens	no	N/A	0.809	0.145	0.241	5e-27
Q5F478	990	Serine/threonine-protein	no	N/A	0.685	0.491	0.251	2e-26
B2RXR6	993	Serine/threonine-protein	no	N/A	0.771	0.551	0.252	2e-25
Q8N8A2	993	Serine/threonine-protein	no	N/A	0.653	0.467	0.260	6e-25

>sp|G5E8K5|ANK3_MOUSE Ankyrin-3 OS=Mus musculus GN=Ank3 PE=1 SV=1

 Score =  144 bits (364), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 164/589 (27%), Positives = 275/589 (46%), Gaps = 69/589 (11%)

Query: 82  DVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKF 141
           +V+   + G TAL++A L G  ++V +L+ +GANVN + + G+TPL++A    +  +V+F
Sbjct: 82  NVDAATKKGNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVRF 141

Query: 142 LLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLH 201
           LL   A          TP LAV+     D     +++S+L+EN    + ++P      LH
Sbjct: 142 LLDNGASQSLATEDGFTP-LAVALQQGHD-----QVVSLLLENDTKGKVRLPA-----LH 190

Query: 202 FAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISD 261
            A  K +     LL++   + ++  K    P L  A    ++ +    LN +   V  + 
Sbjct: 191 IAARKDDTKAAALLLQNDTNADVESKSGFTP-LHIAAHYGNINVATLLLN-RAAAVDFTA 248

Query: 262 GDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQ 321
            +  + LH A   GN  +V++L+ R   I+A+ R  L P+      G  H  V E LL +
Sbjct: 249 RNDITPLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSG--HEQVVEMLLDR 306

Query: 322 DSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITP 381
            +     PI      L    +   P  M+ TQ   L+  ++ ++     ++   +D +T 
Sbjct: 307 SA-----PI------LSKTKNGLSPLHMA-TQGDHLN-CVQLLLQHNVPVDDVTNDYLTA 353

Query: 382 LLFAAKHCD-LQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEM 440
           L  AA HC   + AK L+ K A+ N     KA       + F   + L  ACK KN I +
Sbjct: 354 LHVAA-HCGHYKVAKVLLDKKASPN----AKAL------NGF---TPLHIACK-KNRIRV 398

Query: 441 VKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIA 500
           ++LLL HGA +   +      P+ VA   G   IV +L ++GA  +  N ++ + A  +A
Sbjct: 399 MELLLKHGASIQAVTES-GLTPIHVAAFMGHVNIVSQLMHHGASPNTTN-VRGETALHMA 456

Query: 501 HSTTELE------------ERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSS 548
             + + E            E K  +D   L++    + R  K D V++ ++ GA  N ++
Sbjct: 457 ARSGQAEVVRYLVQDGAQVEAKAKDDQTPLHI----SARLGKADIVQQLLQQGASPNAAT 512

Query: 549 ERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHG 608
               + L   A +G+E++   LLD+GA ++  +  GFT LH+A ++   + +   LL   
Sbjct: 513 TSGYTPLHLAAREGHEDVAAFLLDHGASLSITTKKGFTPLHVAAKYGKLE-VASLLLQKS 571

Query: 609 AYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLID---NLFASVTNPYDP 654
           A  D   GK+G TPL H  A  +   + LL L+D   +  A+  N Y P
Sbjct: 572 ASPDAA-GKSGLTPL-HVAAHYDNQKVALL-LLDQGASPHAAAKNGYTP 617

Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments (By similarity). In skeletal muscle, required for costamere localization of DMD and betaDAG1.
Mus musculus (taxid: 10090)

>sp|Q12955|ANK3_HUMAN Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3

 Score =  143 bits (360), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 166/589 (28%), Positives = 274/589 (46%), Gaps = 69/589 (11%)

Query: 82  DVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKF 141
           +V+   + G TAL++A L G  ++V +L+ +GANVN + + G+TPL++A    +  +VKF
Sbjct: 99  NVDAATKKGNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVKF 158

Query: 142 LLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLH 201
           LL   A          TP LAV+     D     +++S+L+EN    + ++P      LH
Sbjct: 159 LLDNGASQSLATEDGFTP-LAVALQQGHD-----QVVSLLLENDTKGKVRLPA-----LH 207

Query: 202 FAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISD 261
            A  K +     LL++   + ++  K    PL   A   N + +    LN +   V  + 
Sbjct: 208 IAARKDDTKAAALLLQNDNNADVESKSGFTPLHIAAHYGN-INVATLLLN-RAAAVDFTA 265

Query: 262 GDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQ 321
            +  + LH A   GN  +V++L+ R   I+A+ R  L P+      G  H  V E LL  
Sbjct: 266 RNDITPLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSG--HEQVVEMLLD- 322

Query: 322 DSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITP 381
                     R   +L    +   P  M+ TQ   L+  ++ ++     ++   +D +T 
Sbjct: 323 ----------RAAPILSKTKNGLSPLHMA-TQGDHLN-CVQLLLQHNVPVDDVTNDYLTA 370

Query: 382 LLFAAKHCD-LQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEM 440
           L  AA HC   + AK L+ K AN N     KA       + F   + L  ACK KN I++
Sbjct: 371 LHVAA-HCGHYKVAKVLLDKKANPNA----KAL------NGF---TPLHIACK-KNRIKV 415

Query: 441 VKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIA 500
           ++LLL HGA +   +      P+ VA   G   IV +L ++GA  +  N ++ + A  +A
Sbjct: 416 MELLLKHGASIQAVTES-GLTPIHVAAFMGHVNIVSQLMHHGASPNTTN-VRGETALHMA 473

Query: 501 HSTTELE------------ERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSS 548
             + + E            E K  +D   L++    + R  K D V++ ++ GA  N ++
Sbjct: 474 ARSGQAEVVRYLVQDGAQVEAKAKDDQTPLHI----SARLGKADIVQQLLQQGASPNAAT 529

Query: 549 ERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHG 608
               + L   A +G+E++   LLD+GA ++  +  GFT LH+A ++   + +   LL   
Sbjct: 530 TSGYTPLHLSAREGHEDVAAFLLDHGASLSITTKKGFTPLHVAAKYGKLE-VANLLLQKS 588

Query: 609 AYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLID---NLFASVTNPYDP 654
           A  D   GK+G TPL H  A  +   + LL L+D   +  A+  N Y P
Sbjct: 589 ASPDAA-GKSGLTPL-HVAAHYDNQKVALL-LLDQGASPHAAAKNGYTP 634

Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments.

Homo sapiens (taxid: 9606)

>sp|Q4UMH6|Y381_RICFE Putative ankyrin repeat protein RF_0381 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=RF_0381 PE=4 SV=1

 Score =  130 bits (327), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 212/443 (47%), Gaps = 46/443 (10%)

Query: 58   TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
            T+L SAV D    ++ +LL     DVN K  +G T L+ A+  G   +V+LLIH+GANVN
Sbjct: 772  TILYSAV-DYGSPDLVYLLIAYGADVNAKTDNGETVLHYAVESGNLDLVSLLIHNGANVN 830

Query: 118  DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEI 177
            +      T LH A   GN N+V +L+  KAD+ AK +   T IL  +A    +S + N +
Sbjct: 831  NAK----TILHFAAKSGNLNLVNWLIKNKADIHAKTNSGET-ILHFAA----ESGNLN-L 880

Query: 178  ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQ-EPLLFF 236
            ++ LI+N A++  K    + + LHFA    NL++V  LIK KAD +   K N  E +L F
Sbjct: 881  VNWLIKNKADIHAKTNSGE-TILHFAAKSGNLNLVNWLIKNKADIH--AKTNSGETILHF 937

Query: 237  AIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
            A +S ++ +V   + +K  D+        ++LH A   GNL +V +L+    DIN +   
Sbjct: 938  AAKSGNLNLVNWLIKNK-ADIHAKTNSGETILHFAAESGNLNLVSLLIHNGTDINTKTDD 996

Query: 297  FLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKR 356
             L  + +A+  G  +      LL    I+VN        +L   + L    ++S   ++ 
Sbjct: 997  GLTALHYAVESGNLN---LVSLLIHKGIDVNAKTNSGETILHFAVDLGSLDLVSLLMVRG 1053

Query: 357  LDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISD 416
             D            +NA+ DD +T L +A +  +L     L+  GA+VN           
Sbjct: 1054 AD------------VNAKTDDGLTALHYAVESDNLALVSLLMVYGADVNAKNNSG----- 1096

Query: 417  ARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVK 476
                     + L YA    N++++V LL+ +GAD+N T N   +  L   ++  +  I+K
Sbjct: 1097 --------ETPLHYAVIF-NSLDLVSLLIHNGADIN-TKNNSGETVLNSIMEFNNCNILK 1146

Query: 477  ELQNYGAQIDKENYLKNKEAARI 499
                 GA I+ E  L + +   I
Sbjct: 1147 SFILGGADINLETMLPDDQTDSI 1169

Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (taxid: 315456)

>sp|P16157|ANK1_HUMAN Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3

 Score =  129 bits (324), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 169/617 (27%), Positives = 270/617 (43%), Gaps = 72/617 (11%)

Query: 90  GRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADV 149
           G TAL++A L G  ++V  L+++GANVN + +KG+TPL++A    +  +VKFLL   A+ 
Sbjct: 78  GNTALHIAALAGQDEVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQ 137

Query: 150 RAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNL 209
                   TP LAV+     ++     +++ LI  G   + ++P      LH A    + 
Sbjct: 138 NVATEDGFTP-LAVALQQGHEN-----VVAHLINYGTKGKVRLPA-----LHIAARNDDT 186

Query: 210 SVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLH 269
               +L++   + +++ K    P L  A    ++ + +  LN +   V+ +  +  + LH
Sbjct: 187 RTAAVLLQNDPNPDVLSKTGFTP-LHIAAHYENLNVAQLLLN-RGASVNFTPQNGITPLH 244

Query: 270 KACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLP 329
            A   GN+ +V++L+ R   I  + +  L P+  A   G  H  ++E LL   +     P
Sbjct: 245 IASRRGNVIMVRLLLDRGAQIETKTKDELTPLHCAARNG--HVRISEILLDHGA-----P 297

Query: 330 I--KRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAK 387
           I  K  N L    M+          Q   LD  ++ ++     I+    D +TPL  AA 
Sbjct: 298 IQAKTKNGLSPIHMA---------AQGDHLD-CVRLLLQYDAEIDDITLDHLTPLHVAA- 346

Query: 388 HCDLQS-AKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLL 446
           HC     AK L+ KGA  N             S      + L  ACK KN++ +++LLL 
Sbjct: 347 HCGHHRVAKVLLDKGAKPN-------------SRALNGFTPLHIACK-KNHVRVMELLLK 392

Query: 447 HGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE---AARIAHST 503
            GA + D   +    PL VA   G   IVK L   GA  +  N         AAR  H+ 
Sbjct: 393 TGASI-DAVTESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTE 451

Query: 504 TE---LEERKKINDLLKLNLDFLK-NVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVA 559
                L+ + K+N   K +   L    R    + VK  +E+ A  N+++    + L   A
Sbjct: 452 VAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAA 511

Query: 560 WKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTG 619
            +G+ E V  LL+  A     +  GFT LH+A ++     +   LL   A+ +   GK G
Sbjct: 512 REGHVETVLALLEKEASQACMTKKGFTPLHVAAKY-GKVRVAELLLERDAHPNAA-GKNG 569

Query: 620 KTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMK 679
            TPL  A    N DI+ L      L     +P+ P       L  +AKQ    +  E+ +
Sbjct: 570 LTPLHVAVHHNNLDIVKL------LLPRGGSPHSPAWNGYTPLHIAAKQ----NQVEVAR 619

Query: 680 VVKNYAG----ETLIGV 692
            +  Y G    E++ GV
Sbjct: 620 SLLQYGGSANAESVQGV 636

Isoform Mu17 together with obscurin in skeletal muscle may provide a molecular link between the sarcoplasmic reticulum and myofibrils.

Homo sapiens (taxid: 9606)

>sp|Q02357|ANK1_MOUSE Ankyrin-1 OS=Mus musculus GN=Ank1 PE=1 SV=2

 Score =  126 bits (317), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 172/625 (27%), Positives = 270/625 (43%), Gaps = 88/625 (14%)

Query: 90  GRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADV 149
           G TAL++A L G  ++V  L+++GANVN + +KG+TPL++A    +  +VKFLL   A+ 
Sbjct: 74  GNTALHIAALAGQDEVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQ 133

Query: 150 RAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNL 209
                   TP LAV+     ++     +++ LI  G   + ++P      LH A    + 
Sbjct: 134 NVATEDGFTP-LAVALQQGHEN-----VVAHLINYGTKGKVRLPA-----LHIAARNDDT 182

Query: 210 SVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLH 269
               +L++   + +++ K    P L  A    ++ + +  LN +   V+ +  +  + LH
Sbjct: 183 RTAAVLLQNDPNPDVLSKTGFTP-LHIAAHYENLNVAQLLLN-RGASVNFTPQNGITPLH 240

Query: 270 KACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLP 329
            A   GN+ +V++L+ R   I  + +  L P+  A   G  H  ++E LL   +     P
Sbjct: 241 IASRRGNVIMVRLLLDRGAQIETRTKDELTPLHCAARNG--HVRISEILLDHGA-----P 293

Query: 330 I--KRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDM----ITPLL 383
           I  K  N L    M+          Q   LD +  R++ +    NAE DD+    +TPL 
Sbjct: 294 IQAKTKNGLSPIHMA---------AQGDHLDCV--RLLLQ---YNAEIDDITLDHLTPLH 339

Query: 384 FAAKHCDLQS-AKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVK 442
            AA HC     AK L+ KGA  N             S      + L  ACK KN+I +++
Sbjct: 340 VAA-HCGHHRVAKVLLDKGAKPN-------------SRALNGFTPLHIACK-KNHIRVME 384

Query: 443 LLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE---AARI 499
           LLL  GA + D   +    PL VA   G   IVK L   GA  +  N         AAR 
Sbjct: 385 LLLKTGASI-DAVTESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARA 443

Query: 500 AHS--------TTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERR 551
            H+               K  +D   L+       R      VK  +E+GA  N+++   
Sbjct: 444 GHTEVAKYLLQNKAKANAKAKDDQTPLHC----AARIGHTGMVKLLLENGASPNLATTAG 499

Query: 552 GSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYY 611
            + L   A +G+ +    LL+  A     +  GFT LH+A ++     +   LL H A+ 
Sbjct: 500 HTPLHTAAREGHVDTALALLEKEASQACMTKKGFTPLHVAAKY-GKVRLAELLLEHDAHP 558

Query: 612 DMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNSAKQLGL 671
           +   GK G TPL  A    N DI+ L      L     +P+ P       L  +AKQ   
Sbjct: 559 NAA-GKNGLTPLHVAVHHNNLDIVKL------LLPRGGSPHSPAWNGYTPLHIAAKQ--- 608

Query: 672 VHVFEIMKVVKNYAG----ETLIGV 692
            +  E+ + +  Y G    E++ GV
Sbjct: 609 -NQIEVARSLLQYGGSANAESVQGV 632

Attaches integral membrane proteins to cytoskeletal elements; binds to the erythrocyte membrane protein band 4.2, to Na-K ATPase, to the lymphocyte membrane protein GP85, and to the cytoskeletal proteins fodrin, tubulin, vimentin and desmin. Erythrocyte ankyrins also link spectrin (beta chain) to the cytoplasmic domain of the erythrocytes anion exchange protein; they retain most or all of these binding functions. In skeletal muscle, isoform Mu7 together with obscurin may provide a molecular link between the sarcoplasmic reticulum and myofibrils.

Mus musculus (taxid: 10090)

>sp|Q8C8R3|ANK2_MOUSE Ankyrin-2 OS=Mus musculus GN=Ank2 PE=1 SV=2

 Score =  125 bits (315), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 165/680 (24%), Positives = 295/680 (43%), Gaps = 107/680 (15%)

Query: 42  FLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQG 101
           +L+G I+ ++     L  L  A  +  +  V+ LL  G   V+   + G TAL++A L G
Sbjct: 50  YLKGGIDINTCNQNGLNALHLAAKEGHVGLVQELLGRGS-SVDSATKKGNTALHIASLAG 108

Query: 102 LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPIL 161
             ++V +L+  GAN+N + + G+TPL++A    + ++VK+LL   A+         TP+ 
Sbjct: 109 QAEVVKVLVKEGANINAQSQNGFTPLYMAAQENHIDVVKYLLENGANQSTATEDGFTPLA 168

Query: 162 ---------AVSANMSEDS--------------TDTNEIISMLIEN--GANVREKMPF-- 194
                    AV+  +  D+               D  +  ++L++N   A+V+ KM    
Sbjct: 169 VALQQGHNQAVAILLENDTKGKVRLPALHIAARKDDTKSAALLLQNDHNADVQSKMMVNR 228

Query: 195 ---TDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLN 251
              + F+PLH A    N++V  LL+   A  +   +    PL   +   N+  +      
Sbjct: 229 TTESGFTPLHIAAHYGNVNVATLLLNRGAAVDFTARNGITPLHVASKRGNTNMVKLLLDR 288

Query: 252 SKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKH 311
               D    DG   + LH A   G+ Q+V++L++RK  + A+ +  L P+  A   G  H
Sbjct: 289 GGQIDAKTRDG--LTPLHCAARSGHDQVVELLLERKAPLLARTKNGLSPLHMA-AQG-DH 344

Query: 312 THVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENI 371
               ++LLQ  +     P+   ++ LD + +L         ++ +L      ++D+  N 
Sbjct: 345 VECVKHLLQYKA-----PVD--DVTLDYLTALHVAAHCGHYRVTKL------LLDKRANP 391

Query: 372 NAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVN-LTETQKAFISDARSSDFCFRSALQY 430
           NA   +  TPL  A K   ++  + L++ GA++  +TE+    I               +
Sbjct: 392 NARALNGFTPLHIACKKNRIKVMELLVKYGASIQAITESGLTPI---------------H 436

Query: 431 ACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENY 490
                 ++ +V LLL +GA   D +N   +  L +A ++G  ++V+ L   GA +D    
Sbjct: 437 VAAFMGHLNIVLLLLQNGAS-PDVTNIRGETALHMAARAGQVEVVRCLLRNGALVDAR-- 493

Query: 491 LKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSER 550
                 AR   +   +  R    ++++L L  + +              D A  N     
Sbjct: 494 ------AREEQTPLHIASRLGKTEIVQLLLQHMAH-------------PDAATTN----- 529

Query: 551 RGSALIYV-AWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGA 609
            G   +++ A +G  ++  +LL+ GA  +  +  GFT LH+A ++ S D + + LL   A
Sbjct: 530 -GYTPLHISAREGQVDVASVLLEAGAAHSLATKKGFTPLHVAAKYGSLD-VAKLLLQRRA 587

Query: 610 YYDMKDGKTGKTPLKHAEAGKNRDI-IDLLHLIDNLFASVTNPYDPNVYHRIELMNSAKQ 668
             D   GK G TPL  A    N+ + + LL    +  A+  N Y P       L  +AK+
Sbjct: 588 AAD-SAGKNGLTPLHVAAHYDNQKVALLLLEKGASPHATAKNGYTP-------LHIAAKK 639

Query: 669 LGLVHVFEIMKVVKNYAGET 688
               +  +I   + NY  ET
Sbjct: 640 ----NQMQIASTLLNYGAET 655

Attaches integral membrane proteins to cytoskeletal elements. Also binds to cytoskeletal proteins. Required for coordinate assembly of Na/Ca exchanger, Na/K ATPase and InsP3 receptor at sarcoplasmic reticulum sites in cardiomyocytes (By similarity). Required for the coordinated expression of the Na/K ATPase, Na/Ca exchanger and beta-2-spectrin (SPTBN1) in the inner segment of rod photoreceptors. Required for expression and targeting of SPTBN1 in neonatal cardiomyocytes and for the regulation of neonatal cardiomyocyte contraction rate.

Mus musculus (taxid: 10090)

>sp|Q01484|ANK2_HUMAN Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4

 Score =  123 bits (309), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 165/682 (24%), Positives = 295/682 (43%), Gaps = 107/682 (15%)

Query: 42  FLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQG 101
           +L+G I+ ++     L  L  A  +  +  V+ LL  G   V+   + G TAL++A L G
Sbjct: 50  YLKGGIDINTCNQNGLNALHLAAKEGHVGLVQELLGRGS-SVDSATKKGNTALHIASLAG 108

Query: 102 LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPIL 161
             ++V +L+  GAN+N + + G+TPL++A    + ++VK+LL   A+         TP+ 
Sbjct: 109 QAEVVKVLVKEGANINAQSQNGFTPLYMAAQENHIDVVKYLLENGANQSTATEDGFTPLA 168

Query: 162 ---------AVSANMSEDS--------------TDTNEIISMLIEN--GANVREKMPF-- 194
                    AV+  +  D+               D  +  ++L++N   A+V+ KM    
Sbjct: 169 VALQQGHNQAVAILLENDTKGKVRLPALHIAARKDDTKSAALLLQNDHNADVQSKMMVNR 228

Query: 195 ---TDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLN 251
              + F+PLH A    N++V  LL+   A  +   +    PL   +   N+  +      
Sbjct: 229 TTESGFTPLHIAAHYGNVNVATLLLNRGAAVDFTARNGITPLHVASKRGNTNMVKLLLDR 288

Query: 252 SKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKH 311
               D    DG   + LH A   G+ Q+V++L++R   + A+ +  L P+  A   G  H
Sbjct: 289 GGQIDAKTRDG--LTPLHCAARSGHDQVVELLLERGAPLLARTKNGLSPLHMA-AQG-DH 344

Query: 312 THVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENI 371
               ++LLQ  +     P+   ++ LD + +L         ++ +L      ++D+  N 
Sbjct: 345 VECVKHLLQHKA-----PVD--DVTLDYLTALHVAAHCGHYRVTKL------LLDKRANP 391

Query: 372 NAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVN-LTETQKAFISDARSSDFCFRSALQY 430
           NA   +  TPL  A K   ++  + L++ GA++  +TE+    I               +
Sbjct: 392 NARALNGFTPLHIACKKNRIKVMELLVKYGASIQAITESGLTPI---------------H 436

Query: 431 ACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENY 490
                 ++ +V LLL +GA   D +N   +  L +A ++G  ++V+ L   GA +D    
Sbjct: 437 VAAFMGHLNIVLLLLQNGAS-PDVTNIRGETALHMAARAGQVEVVRCLLRNGALVDAR-- 493

Query: 491 LKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSER 550
                 AR   +   +  R    ++++L L  + +              D A  N     
Sbjct: 494 ------AREEQTPLHIASRLGKTEIVQLLLQHMAH-------------PDAATTN----- 529

Query: 551 RGSALIYV-AWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGA 609
            G   +++ A +G  ++  +LL+ GA  +  +  GFT LH+A ++ S D + + LL   A
Sbjct: 530 -GYTPLHISAREGQVDVASVLLEAGAAHSLATKKGFTPLHVAAKYGSLD-VAKLLLQRRA 587

Query: 610 YYDMKDGKTGKTPLKHAEAGKNRDI-IDLLHLIDNLFASVTNPYDPNVYHRIELMNSAKQ 668
             D   GK G TPL  A    N+ + + LL    +  A+  N Y P       L  +AK+
Sbjct: 588 AAD-SAGKNGLTPLHVAAHYDNQKVALLLLEKGASPHATAKNGYTP-------LHIAAKK 639

Query: 669 LGLVHVFEIMKVVKNYAGETLI 690
               +  +I   + NY  ET I
Sbjct: 640 ----NQMQIASTLLNYGAETNI 657

Attaches integral membrane proteins to cytoskeletal elements. Also binds to cytoskeletal proteins. Required for coordinate assembly of Na/Ca exchanger, Na/K ATPase and InsP3 receptor at sarcoplasmic reticulum sites in cardiomyocytes. Required for the coordinated expression of the Na/K ATPase, Na/Ca exchanger and beta-2-spectrin (SPTBN1) in the inner segment of rod photoreceptors. Required for expression and targeting of SPTBN1 in neonatal cardiomyocytes and for the regulation of neonatal cardiomyocyte contraction rate.

Homo sapiens (taxid: 9606)

>sp|Q5F478|ANR44_CHICK Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Gallus gallus GN=ANKRD44 PE=2 SV=1

 Score =  121 bits (303), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 145/576 (25%), Positives = 245/576 (42%), Gaps = 89/576 (15%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           T L  A  +  +  V  LL+ G  ++N   +  R AL+ A   G  ++V LLI+HGA V 
Sbjct: 142 TALHHAALNGHVEMVNLLLAKGA-NINAFDKKDRRALHWAAYMGHLEVVALLINHGAEVT 200

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEI 177
            +D+KGYTPLH A   G  NIVK LL+   ++  + ++     L ++    +DS     +
Sbjct: 201 CKDKKGYTPLHAAASNGQINIVKHLLNLGVEID-EMNIYGNTALHIACYNGQDS-----V 254

Query: 178 ISMLIENGANVREKMPFTD-FSPLHFAVVKKNLSV-VELLIKCKADTNLIVKVNQEPLLF 235
           ++ LI+ GANV +  P  + F+PLHFA    + ++ +ELL+   AD N+  K  + PL  
Sbjct: 255 VNELIDYGANVNQ--PNNNGFTPLHFAAASTHGALCLELLVNNGADVNIQSKDGKSPLHM 312

Query: 236 FAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNR 295
            A+     +      N    D    DG  N+ LH A   G+  ++  L+    D      
Sbjct: 313 TAVHGRFTRSQTLIQNGGEIDCVDKDG--NTPLHVAARYGHELLINTLITSGADTAKCGI 370

Query: 296 YFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIK 355
           + + P+  A                  ++N +    R   LL +   +  P    +T + 
Sbjct: 371 HNMFPLHLA------------------ALNAHSDCCRK--LLSSGFEIDTPDSFGRTCLH 410

Query: 356 RLD-----QIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQ 410
                   + IK +     + N +     TPL +AA +C     + L+  GAN+N T   
Sbjct: 411 AAAAGGNVECIKLLQSSGADFNKKDKRGRTPLHYAAANCHFHCIETLVTTGANINET--- 467

Query: 411 KAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHG---ADVNDTSNKPKQKPLAVAI 467
                     D   R+ L YA    ++++  K +L +    A+  + +++ K+K  A+ +
Sbjct: 468 ----------DDWGRTPLHYAA--ASDMDRKKNILGNSHENAEELERTSEMKEKEAALCL 515

Query: 468 QSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVR 527
           +            +  Q D    +++KE     H       R+ +  LL+ N        
Sbjct: 516 E------------FLLQNDANPSIQDKEGYNTVHYAAAYGHRQCLELLLEKN-------- 555

Query: 528 SNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTA 587
           SN ++E              S    S L   A+ G+ + +++LL +  D++ K   G TA
Sbjct: 556 SNMFEE------------SDSSATKSPLHLAAYNGHHQALEVLLQSLVDLDIKDEKGRTA 603

Query: 588 LHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPL 623
           L +A  F  +   V  L+  GA   +KD  T +TPL
Sbjct: 604 LDLA-AFKGHAECVEALISQGASVTVKDNVTKRTPL 638

Putative regulatory subunit of protein phosphatase 6 (PP6) that may be involved in the recognition of phosphoprotein substrates.

Gallus gallus (taxid: 9031)

>sp|B2RXR6|ANR44_MOUSE Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Mus musculus GN=Ankrd44 PE=2 SV=1

 Score =  117 bits (294), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 166/657 (25%), Positives = 268/657 (40%), Gaps = 109/657 (16%)

Query: 53  KSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHH 112
           K  E   L  A++     E+  L+   + DVN    + RT L++A   G  +++ LLI  
Sbjct: 5   KLCEQPPLVQAIFSGDPEEIRMLIHKTE-DVNALDSEKRTPLHVAAFLGDAEIIELLILS 63

Query: 113 GANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRA------------------KCS 154
           GA VN +D    TPLH A    ++  V+ L+   ADV A                  KC+
Sbjct: 64  GARVNAKDNMWLTPLHRAVASRSEEAVQVLIKHSADVNARDKNWQTPLHVAAANKAVKCA 123

Query: 155 MMVTPILAVSANMSEDSTDTN----------EIISMLIENGANVREKMPFTDFSPLHFAV 204
            ++ P+L+ S N+S+    T           E++++L+  GAN+       D   LH+A 
Sbjct: 124 EVIIPLLS-SVNVSDRGGRTALHHAALNGHMEMVNLLLAKGANIN-AFDKKDRRALHWAA 181

Query: 205 VKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDL 264
              +L VV LLI   A+     K    P L  A  +  + +V+  L   N  V I + ++
Sbjct: 182 YMGHLDVVALLINHGAEVTCKDKKGYTP-LHAAASNGQISVVKHLL---NLGVEIDEINV 237

Query: 265 --NSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQD 322
             N+ LH AC+ G   +V  L+    ++N  N     P+ FA      H  +   LL  +
Sbjct: 238 YGNTALHIACYNGQDAVVNELIDYGANVNQPNNSGFTPLHFA--AASTHGALCLELLVNN 295

Query: 323 SINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPL 382
             +VN+  K     L  + ++      SQT I+   +I    +D+  N         TPL
Sbjct: 296 GADVNIQSKDGKSPLH-MTAVHGRFTRSQTLIQNGGEI--DCVDKDGN---------TPL 343

Query: 383 LFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARS----SDFC--------------- 423
             AA+H        LI  GA+         F     +    SD C               
Sbjct: 344 HVAARHGHELLINTLITSGADTAKCGIHSMFPLHLAALNAHSDCCRKLLSSGFEIDTPDT 403

Query: 424 FRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGA 483
           F     +A     N+E +KLL   GAD +   +K  + PL  A  +  F  +K L   GA
Sbjct: 404 FGRTCLHAAAAGGNVECIKLLQSSGADFH-KKDKCGRTPLHYAAANCHFHCIKALVTTGA 462

Query: 484 QIDKENYL--------------KNKEAARIAH-STTELEERKKINDL-LKLNLDFLKNVR 527
            +++ +                +NK     AH ++ ELE  +++ +    L L+FL    
Sbjct: 463 NVNETDDWGRTALHYAAASDMDRNKMILGNAHDNSEELERAREVKEKDAALCLEFLLQND 522

Query: 528 SNK-------YDEVKKNIEDG--ACVNVSSERRG------------SALIYVAWKGYEEI 566
           +N        Y+ +      G   C+ +  ER              S L   A+ G+ + 
Sbjct: 523 ANPSIRDKEGYNSIHYAAAYGHRQCLELLLERTNTGFEESDGGALKSPLHLAAYNGHHQA 582

Query: 567 VDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPL 623
           +++LL +  D++ +   G TAL++A  F  +   V  L++ GA   +KD  T +TPL
Sbjct: 583 LEVLLQSLVDLDIRDEKGRTALYLA-AFKGHTECVEALVNQGASIFVKDNVTKRTPL 638

Putative regulatory subunit of protein phosphatase 6 (PP6) that may be involved in the recognition of phosphoprotein substrates.

Mus musculus (taxid: 10090)

>sp|Q8N8A2|ANR44_HUMAN Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Homo sapiens GN=ANKRD44 PE=1 SV=3

 Score =  116 bits (291), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 144/553 (26%), Positives = 238/553 (43%), Gaps = 89/553 (16%)

Query: 86  KLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSK 145
           KL D +  L  AI  G  + + +LIH   +VN  D +  TPLH+A +LG+  I++ L+  
Sbjct: 5   KLTD-QPPLVQAIFSGDPEEIRMLIHKTEDVNTLDSEKRTPLHVAAFLGDAEIIELLILS 63

Query: 146 KADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGA--NVREKMPFTDFSPLHFA 203
            A V AK +M +TP+    A+ SE      E + +LI++ A  N R+K   T   PLH A
Sbjct: 64  GARVNAKDNMWLTPLHRAVASRSE------EAVQVLIKHSADVNARDKNWQT---PLHVA 114

Query: 204 VVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGD 263
              K +   E++I   +  N+  +  +  L   A+  + V++V   L +K  +++  D  
Sbjct: 115 AANKAVKCAEVIIPLLSSVNVSDRGGRTALHHAALNGH-VEMVNLLL-AKGANINAFDKK 172

Query: 264 LNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDS 323
               LH A ++G+L +V +L+    ++  +++    P+  A   G+   +V ++LL    
Sbjct: 173 DRRALHWAAYMGHLDVVALLINHGAEVTCKDKKGYTPLHAAASNGQ--INVVKHLL---- 226

Query: 324 INVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLL 383
            N+ + I   N+  +T + +              D ++  +ID   N+N   ++  TPL 
Sbjct: 227 -NLGVEIDEINVYGNTALHI--------ACYNGQDAVVNELIDYGANVNQPNNNGFTPLH 277

Query: 384 FAA--KHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMV 441
           FAA   H  L   + L+  GA+VN+           +S D   +S L     H       
Sbjct: 278 FAAASTHGAL-CLELLVNNGADVNI-----------QSKD--GKSPLHMTAVH-GRFTRS 322

Query: 442 KLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAH 501
           + L+ +G ++ D  +K    PL VA + G   ++  L   GA   K              
Sbjct: 323 QTLIQNGGEI-DCVDKDGNTPLHVAARYGHELLINTLITSGADTAK-------------- 367

Query: 502 STTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWK 561
                     I+ +  L+L  L N  S   D  +K +  G  ++   +   + L   A  
Sbjct: 368 --------CGIHSMFPLHLAAL-NAHS---DCCRKLLSSGFEIDTPDKFGRTCLHAAAAG 415

Query: 562 GYEEIVDLLLDNGADVNFKSATGFTALHMA---CRFHSNDNIV-------------RKLL 605
           G  E + LL  +GAD + K   G T LH A   C FH  + +V             R  L
Sbjct: 416 GNVECIKLLQSSGADFHKKDKCGRTPLHYAAANCHFHCIETLVTTGANVNETDDWGRTAL 475

Query: 606 HHGAYYDMKDGKT 618
           H+ A  DM   KT
Sbjct: 476 HYAAASDMDRNKT 488

Putative regulatory subunit of protein phosphatase 6 (PP6) that may be involved in the recognition of phosphoprotein substrates.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	710
321272352	866	ankyrin repeat protein [Wolbachia endosy	0.832	0.682	0.292	2e-47
189502738	1585	hypothetical protein Aasi_1435 [Candidat	0.825	0.369	0.287	2e-47
321272300	866	ankyrin repeat protein [Wolbachia endosy	0.832	0.682	0.292	2e-47
373450505	866	conserved hypothetical protein (Ankyrin	0.836	0.685	0.294	4e-47
225630443	866	ankyrin repeat domain protein [Wolbachia	0.836	0.685	0.294	1e-46
222825093	866	ankyrin motif protein [Wolbachia endosym	0.832	0.682	0.289	6e-46
123507472	1489	ankyrin repeat protein [Trichomonas vagi	0.761	0.363	0.284	1e-42
321272302	2474	ankyrin repeat protein [Wolbachia endosy	0.846	0.242	0.274	3e-41
383858766	2315	PREDICTED: uncharacterized protein LOC10	0.812	0.249	0.285	5e-41
321272354	2474	ankyrin repeat protein [Wolbachia endosy	0.846	0.242	0.273	1e-40

>gi|321272352|gb|ADW80233.1| ankyrin repeat protein [Wolbachia endosymbiont wVitB of Nasonia vitripennis phage WOVitB]

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 195/666 (29%), Positives = 315/666 (47%), Gaps = 75/666 (11%)

Query: 27  LFSEIMFSEEDAFGYFLQGI-INSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNE 85
           +F+  + +  D   +F++ +  N  + K + LT L  A  + ++  V  LL  G  D+N 
Sbjct: 1   MFTNRISNNLDQLQFFVEFLNENYETQKHLSLTPLHLAAGNGQLDLVNTLLGEG-LDINS 59

Query: 86  KLQ-DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLS 144
           +++ DG T LY AI +   +MV  LI HGA+VN +   G+TPL  A   G  +IV  L++
Sbjct: 60  EIKYDGFTPLYFAIAKNRLEMVNFLIAHGADVNHKTILGFTPLSFASQQGYLDIVNTLIA 119

Query: 145 KKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAV 204
             AD+  K   + TP+   + N   D      I+++ IENG +V   +      PLH AV
Sbjct: 120 NGADLSTKTDKLNTPLHLAAENGHLD------IVNVFIENGLDVN-AVNNDRARPLHSAV 172

Query: 205 VKKNLSVVELLIKCKADTNL--------IVKVNQEPLLFFAIESNSVKIVEAFLNSKNFD 256
              NL VV+ LI   +D N          V  N  P L    ++  + IV+  L +   +
Sbjct: 173 QNGNLEVVKALISQGSDINAGSSGIGNRKVDANITP-LHLGTQTGRLDIVKVLLEA-GAN 230

Query: 257 VSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAE 316
           V+    D  + LH A   G L++V +L+K K ++NA++   L P+  A    R H  V +
Sbjct: 231 VNAKTDDKITPLHLASQNGFLELVDILLKAKSNVNAKDYENLTPLHLA--AERNHFGVVK 288

Query: 317 YLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLD---QIIKRIIDRTENINA 373
            LL    I+VN                KD    +   I   +   +++K +I++  N+NA
Sbjct: 289 SLLLVRGIDVN---------------AKDHDNSTALHIGSQNGHLEVVKLLIEKKANVNA 333

Query: 374 EGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQK-AFISDARSSDFCF-------- 424
           + ++  TPL  A +    + + +LI+ GAN+N  + Q    + +A  + F          
Sbjct: 334 KKNEGFTPLHLAMQQSHFEVSDFLIKNGANINTVDDQNWTPLHNAAYNGFSLKIVESLIA 393

Query: 425 ------------RSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDF 472
                       R AL  A +H N++E++  L+ +GAD+N   N+    PL  A   G+ 
Sbjct: 394 KGANINAKMDDGRRALHLAAEH-NHLEIMNFLIENGADINALDNR-SWTPLHCAAYDGNL 451

Query: 473 QIVKELQNYGAQIDKENYLKNKEAARIA--HSTTE-----LEERKKINDLLKLNLDFLKN 525
           ++ K L   GA I+ +  +K+      A  H   E     LE+   IN L   N   L  
Sbjct: 452 EVAKSLLEKGADINAKT-VKSTTPLHFAVDHDHLEVVELLLEKEADINALDHTNWTPLHF 510

Query: 526 VRSNKYDEVKKN-IEDGACVNV-SSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSAT 583
                YD++    ++ GA VNV  ++ +G+AL   A  G+ ++V  L+ +GADVN K   
Sbjct: 511 AAEKGYDQIAAILLKHGADVNVKENQNKGTALHLAAQYGHPKVVKTLIISGADVNAKMDK 570

Query: 584 GFTALHMACRFHSNDNIVRKLLHHGAYYDMK-DGKTGKTPLKHAEAGKNRDIIDLLHLID 642
             T LH+  +   N +IVR LL  GAY++ + +G     PL  AE   N ++I LL L++
Sbjct: 571 NATPLHLGAQI-GNLDIVRSLLMSGAYFNARAEGGRYVLPLHFAERRGNPEVIKLLKLVE 629

Query: 643 NLFASV 648
            LF ++
Sbjct: 630 KLFKAI 635

Source: Wolbachia endosymbiont wVitB of Nasonia vitripennis phage WOVitB

Species: Wolbachia endosymbiont wVitB of Nasonia vitripennis phage WOVitB

Superkingdom: Viruses

>gi|189502738|ref|YP_001958455.1| hypothetical protein Aasi_1435 [Candidatus Amoebophilus asiaticus 5a2] gi|189498179|gb|ACE06726.1| hypothetical protein Aasi_1435 [Candidatus Amoebophilus asiaticus 5a2]

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 188/653 (28%), Positives = 314/653 (48%), Gaps = 67/653 (10%)

Query: 17   VKESSYRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLL 76
            VKE  Y  H           +A  Y ++  ++  +      T LC A     +  V++L+
Sbjct: 501  VKERKYPLH---KACRIGNLEAVKYLIEKGVDIHAKNKHGNTPLCYACDKGHLEVVKYLV 557

Query: 77   STGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNK 136
              G  D+N   +DG T L+        ++V  L+  G ++N  D  G TPLH AC  GN 
Sbjct: 558  EKG-ADINATDEDGETLLHCVCKNDNIELVKYLVEKGVDINVIDGYGVTPLHYACRDGNL 616

Query: 137  NIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTD 196
             +VK+L+ K AD++AK     TP      N      D  E++  L+E GAN++ K   ++
Sbjct: 617  EVVKYLVEKGADIQAKNKDGETPFHWAHDN------DHLEVVKYLLEKGANIQAKSRESE 670

Query: 197  FSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFD 256
             S L++A  + +L V++ L++   D       + E LL  A  +N +++V+ +L  K  D
Sbjct: 671  -SLLYWACREGDLEVIKYLVEKGVDIQ-ATNEDGETLLHCAYSNNHLELVK-YLVEKGAD 727

Query: 257  VSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAE 316
            ++I+DGD  +LLH  C   N+++V+ LV++  DIN  +     P+ +A   G     + +
Sbjct: 728  INITDGDGATLLHCICKNDNIELVKYLVEKGADINITDGDGWTPLHYACENGE--LEIVK 785

Query: 317  YLLQQDS-INV---------NLPIKRPNLLL---------DTVMSLKDPKVMSQTQIKRL 357
            YL+++ + INV         +   +  NL +         D   + +D + +      + 
Sbjct: 786  YLVEKGADINVIDGYGVTSLHYACREGNLEVVKYLVEKGADINATDEDGETLLHYACNKG 845

Query: 358  D-QIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISD 416
            + +++K ++D+  +IN + +D  T L FA ++  L+  KYL+ KGA             D
Sbjct: 846  NLEVVKLLVDKGADINIKSNDQCTALHFATRYDHLEIVKYLLDKGA-------------D 892

Query: 417  ARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVK 476
             ++ +    + L YACK K ++E+VK L+  G+D+N   NK +   L  A + G  +IVK
Sbjct: 893  IQAKNKEVETLLIYACK-KGDLEVVKNLVDKGSDIN-VKNKNQWTALHFATRYGHLEIVK 950

Query: 477  ELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDF-LKN---------- 525
             L + GA I+    +KN +     H  T     + +  LL    D  +KN          
Sbjct: 951  YLLDKGADIN----VKNNDQWTALHFATRYNHLEIVKYLLDKGADINVKNNDQWTALHFA 1006

Query: 526  VRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGF 585
             R N  + VK  +E GA +N  ++   + L      G+ E+V  LLD GAD+N K+   +
Sbjct: 1007 TRYNHLEIVKLLLEKGADINAKNKYGNTTLHKACENGHLEVVKYLLDKGADINVKNNDQW 1066

Query: 586  TALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
            TALH A R+ ++  IV+ LL  GA  + K+ K G T L  A    + +I+ LL
Sbjct: 1067 TALHFATRY-NHLKIVKLLLDKGADINAKN-KEGNTTLHKACENDHLEIVKLL 1117

Source: Candidatus Amoebophilus asiaticus 5a2

Species: Candidatus Amoebophilus asiaticus

Genus: Candidatus Amoebophilus

Phylum: Bacteroidetes

Superkingdom: Bacteria

>gi|321272300|gb|ADW80185.1| ankyrin repeat protein [Wolbachia endosymbiont wVitA of Nasonia vitripennis phage WOVitA1]

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 195/666 (29%), Positives = 315/666 (47%), Gaps = 75/666 (11%)

Query: 27  LFSEIMFSEEDAFGYFLQGI-INSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNE 85
           +F+  + +  D   +F++ +  N  + K + LT L  A  + ++  V  LL  G  D+N 
Sbjct: 1   MFTNRISNNLDQLQFFVEFLNENYETQKHLSLTPLHLAAGNGQLDLVNTLLGEG-LDINS 59

Query: 86  KLQ-DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLS 144
           +++ DG T LY AI +   +MV  LI HGA+VN +   G+TPL  A   G  +IV  L++
Sbjct: 60  EIKYDGFTPLYFAIAKNRLEMVNFLIAHGADVNHKTILGFTPLSFASQQGYLDIVNTLIA 119

Query: 145 KKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAV 204
             AD+  K   + TP+   + N   D      I+++ IENG +V   +      PLH AV
Sbjct: 120 NGADLSTKTDKLNTPLHLAAENGHLD------IVNVFIENGLDVN-AVNNDRARPLHSAV 172

Query: 205 VKKNLSVVELLIKCKADTNL--------IVKVNQEPLLFFAIESNSVKIVEAFLNSKNFD 256
              NL VV+ LI   +D N          V  N  P L    ++  + IV+  L +   +
Sbjct: 173 QNGNLEVVKALISQGSDINAGSSGIGNRKVDANITP-LHLGTQTGRLDIVKVLLEA-GAN 230

Query: 257 VSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAE 316
           V+    D  + LH A   G L++V +L+K K ++NA++   L P+  A    R H  V +
Sbjct: 231 VNAKTDDKITPLHLASQNGFLELVDILLKAKSNVNAKDYENLTPLHLA--AERNHFGVVK 288

Query: 317 YLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLD---QIIKRIIDRTENINA 373
            LL    I+VN                KD    +   I   +   +++K +I++  N+NA
Sbjct: 289 SLLLVRGIDVN---------------AKDHDNSTALHIGSQNGHLEVVKLLIEKKANVNA 333

Query: 374 EGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQK-AFISDARSSDFCF-------- 424
           + ++  TPL  A +    + + +LI+ GAN+N  + Q    + +A  + F          
Sbjct: 334 KKNEGFTPLHLAMQQSHFEVSDFLIKNGANINTVDDQNWTPLHNAAYNGFSLKIVESLIA 393

Query: 425 ------------RSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDF 472
                       R AL  A +H N++E++  L+ +GAD+N   N+    PL  A   G+ 
Sbjct: 394 KGANINAKMDDGRRALHLAAEH-NHLEIMNFLIENGADINALDNR-SWTPLHCAAYDGNL 451

Query: 473 QIVKELQNYGAQIDKENYLKNKEAARIA--HSTTE-----LEERKKINDLLKLNLDFLKN 525
           ++ K L   GA I+ +  +K+      A  H   E     LE+   IN L   N   L  
Sbjct: 452 EVAKSLLEKGADINAKT-VKSTTPLHFAVDHDHLEVVELLLEKEADINALDHTNWTPLHF 510

Query: 526 VRSNKYDEVKKN-IEDGACVNV-SSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSAT 583
                YD++    ++ GA VNV  ++ +G+AL   A  G+ ++V  L+ +GADVN K   
Sbjct: 511 AAEKGYDQIAAILLKHGADVNVKENQNKGTALHLAAQYGHPKVVKTLIISGADVNAKMDK 570

Query: 584 GFTALHMACRFHSNDNIVRKLLHHGAYYDMK-DGKTGKTPLKHAEAGKNRDIIDLLHLID 642
             T LH+  +   N +IVR LL  GAY++ + +G     PL  AE   N ++I LL L++
Sbjct: 571 NATPLHLGAQI-GNLDIVRSLLMSGAYFNARAEGGRYVLPLHFAERRGNPEVIKLLKLVE 629

Query: 643 NLFASV 648
            LF ++
Sbjct: 630 KLFKAI 635

Source: Wolbachia endosymbiont wVitA of Nasonia vitripennis phage WOVitA1

Species: Wolbachia endosymbiont wVitA of Nasonia vitripennis phage WOVitA1

Superkingdom: Viruses

>gi|373450505|ref|ZP_09542490.1| conserved hypothetical protein (Ankyrin repeat domain) [Wolbachia pipientis wAlbB] gi|371932268|emb|CCE77499.1| conserved hypothetical protein (Ankyrin repeat domain) [Wolbachia pipientis wAlbB]

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 195/663 (29%), Positives = 315/663 (47%), Gaps = 69/663 (10%)

Query: 27  LFSEIMFSEEDAFGYFLQGI-INSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNE 85
           +F+  + +  D   +F++ +  N  + K + LT L  A  + ++  V  LL  G  D+N 
Sbjct: 1   MFTNRISNNLDQLQFFVEFLNENYETQKHLSLTPLHLAAGNGQLDLVNTLLGEG-LDINS 59

Query: 86  KLQ-DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLS 144
           +++ DG T LY AI +   +MV  LI HGA+VN +   G+TPL  A   G  +IV  L++
Sbjct: 60  EIKYDGFTPLYFAIAKNRLEMVNFLIAHGADVNHKTILGFTPLSFASQQGYLDIVNTLIA 119

Query: 145 KKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAV 204
             AD+  K   + TP+   + N   D      I+++ IE G +V   +      PLH AV
Sbjct: 120 NGADLSTKTDKLNTPLHLAAENGHLD------IVNVFIEKGLDVN-AVNNDRARPLHSAV 172

Query: 205 VKKNLSVVELLIKCKADTNL--------IVKVNQEPLLFFAIESNSVKIVEAFLNSKNFD 256
              NL VV+ LI   +D N          V  N  P L    ++  + IV+  L +   +
Sbjct: 173 QNGNLEVVKALISQGSDINAGSSGIGNRKVDANITP-LHLGTQTGRLDIVKVLLEA-GAN 230

Query: 257 VSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAE 316
           V+    D  + LH A   G L++V +L+K K ++NA++   L P+  A    R H  V +
Sbjct: 231 VNAKTDDKITPLHLASQNGFLELVDILLKAKSNVNAKDYENLTPLHLA--AERNHFGVVK 288

Query: 317 YLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGD 376
            LL    I+VN      +  L              +Q   L +++K +I++  N+NA+ +
Sbjct: 289 SLLLVKGIDVNAKGHDNSTALHI-----------GSQNGHL-EVVKLLIEKKGNVNAKKN 336

Query: 377 DMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQK-AFISDARSSDFCF----------- 424
           +  TPL  A +    + + +LI+ GAN+N  + Q    + +A  + F             
Sbjct: 337 EGFTPLHLAIQQSHFEVSDFLIKNGANINTVDDQNWTPLHNAAYNGFSLKIVESLIAKGA 396

Query: 425 ---------RSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIV 475
                    R AL  A +H N++E++  L+ +GAD+N   N+    PL  A   G+ ++ 
Sbjct: 397 NINAKMDDGRRALHLAAEH-NHLEIMNFLIENGADINALDNR-SWTPLHCAAYDGNLEVA 454

Query: 476 KELQNYGAQIDKENYLKNKEAARIA--HSTTE-----LEERKKINDLLKLNLDFLKNVRS 528
           K L + GA I+ +  +K+      A  H   E     LE+   IN L   N   L     
Sbjct: 455 KSLLDKGADINAKT-VKSTTPLHFAVDHDHLEVVELLLEKEADINALDHTNWTPLHFAAE 513

Query: 529 NKYDEVKKN-IEDGACVNV-SSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
             YD++    ++ GA VNV  ++ +G+AL   A  G+ ++V  L+ NGADVN K     T
Sbjct: 514 KGYDQIATVLLKHGADVNVKENQNKGTALHLAAQYGHPKVVKTLIINGADVNAKMDKNAT 573

Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMK-DGKTGKTPLKHAEAGKNRDIIDLLHLIDNLF 645
            LH+  +   N +IVR LL  GAY++ + +G     PL  AE   N ++I LL L++ LF
Sbjct: 574 PLHLGAQI-GNLDIVRSLLMSGAYFNARAEGGRYVLPLHFAERRGNPEVIKLLKLVEKLF 632

Query: 646 ASV 648
            ++
Sbjct: 633 KAI 635

Source: Wolbachia pipientis wAlbB

Species: Wolbachia pipientis

Genus: Wolbachia

Family: Anaplasmataceae

Order: Rickettsiales

Class: Alphaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

>gi|225630443|ref|YP_002727234.1| ankyrin repeat domain protein [Wolbachia sp. wRi] gi|225592424|gb|ACN95443.1| ankyrin repeat domain protein [Wolbachia sp. wRi]

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 195/663 (29%), Positives = 314/663 (47%), Gaps = 69/663 (10%)

Query: 27  LFSEIMFSEEDAFGYFLQGI-INSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNE 85
           +F+  + +  D   +F++ +  N  + K + LT L  A  + ++  V  LL  G  D+N 
Sbjct: 1   MFTNRISNNLDQLQFFVEFLNENYETQKHLSLTPLHLAAGNGQLDLVNTLLGEG-LDINS 59

Query: 86  KLQ-DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLS 144
           +++ DG T LY AI +   +MV  LI HGA+VN R   G+TPL  A   G  +IV  L++
Sbjct: 60  EIKYDGFTPLYFAIAKNRLEMVNFLIAHGADVNHRAILGFTPLSFASQQGYLDIVNTLIA 119

Query: 145 KKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAV 204
             AD+  K   + TP+   + N   D      I+++ IE G +V   +      PLH AV
Sbjct: 120 NGADLSTKTDKLNTPLHLAAENGHLD------IVNVFIEKGLDVN-AVNNDRARPLHSAV 172

Query: 205 VKKNLSVVELLIKCKADTNL--------IVKVNQEPLLFFAIESNSVKIVEAFLNSKNFD 256
              NL VV+ LI   ++ N          V  N  P L    ++  + IV+  L +   +
Sbjct: 173 QNGNLEVVKALISQGSNINAGSSGIGNHKVDANITP-LHLGTQTGRLDIVKVLLEA-GAN 230

Query: 257 VSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAE 316
           V+    D  + LH A   G L++V +L+K K ++NA++   L P+  A    R H  V +
Sbjct: 231 VNAKTDDKITPLHLASQNGFLELVDILLKAKSNVNAKDYENLTPLHLA--AERNHFGVVK 288

Query: 317 YLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGD 376
            LL    I+VN      +  L              +Q   L +++K +I++  N+NA+ +
Sbjct: 289 SLLLVKGIDVNAKGHDNSTALHI-----------GSQNGHL-EVVKLLIEKKANVNAKKN 336

Query: 377 DMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQK-AFISDARSSDFCF----------- 424
           +  TPL  A +    + + +LI+ GAN+N  + Q    + +A  + F             
Sbjct: 337 EGFTPLHLAIQQSHFEVSDFLIKNGANINTVDDQNWTPLHNAAYNGFSLKIVESLIAKGA 396

Query: 425 ---------RSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIV 475
                    R AL  A +H N++E++  L+ +GAD+N   N+    PL  A   G  ++ 
Sbjct: 397 NINAKMDDGRRALHLAAEH-NHLEIMNFLIENGADINALDNR-SWTPLHCAAYDGSLEVA 454

Query: 476 KELQNYGAQIDKENYLKNKEAARIA--HSTTE-----LEERKKINDLLKLNLDFLKNVRS 528
           K L + GA I+ +  +K+      A  H   E     LE+   IN L   N   L     
Sbjct: 455 KSLLDKGADINAKT-VKSTTPLHFAVDHDHLEVVELLLEKEADINALDHTNWTPLHFAAE 513

Query: 529 NKYDEVKKN-IEDGACVNV-SSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
             YD++    ++ GA VNV  ++ +G+AL   A  G+ ++V  L+ NGADVN K     T
Sbjct: 514 KGYDQIATVLLKHGADVNVKENQNKGTALHLAAQYGHPKVVKTLIINGADVNAKMDKNAT 573

Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMK-DGKTGKTPLKHAEAGKNRDIIDLLHLIDNLF 645
            LH+  +   N +IVR LL  GAY++ + +G     PL  AE   N ++I LL L++ LF
Sbjct: 574 PLHLGAQI-GNLDIVRSLLMSGAYFNARAEGGRYVLPLHFAERRGNPEVIKLLKLVEKLF 632

Query: 646 ASV 648
            ++
Sbjct: 633 KAI 635

Source: Wolbachia sp. wRi

Species: Wolbachia sp. wRi

Genus: Wolbachia

Family: Anaplasmataceae

Order: Rickettsiales

Class: Alphaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

>gi|222825093|dbj|BAH22251.1| ankyrin motif protein [Wolbachia endosymbiont of Cadra cautella]

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 193/666 (28%), Positives = 314/666 (47%), Gaps = 75/666 (11%)

Query: 27  LFSEIMFSEEDAFGYFLQGI-INSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNE 85
           +F+  + +  D   +F++ +  N    K + LT L  A  + ++  V  LL  G  D+N 
Sbjct: 1   MFTNRISNNLDQLQFFVEFLNENYEIQKHLSLTPLHLAAGNGQLDLVNTLLGEG-LDINS 59

Query: 86  KLQ-DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLS 144
           +++ DG T LY +I +   +MV  LI HGA+VN +   G+TPL  A   G  +IV  L++
Sbjct: 60  EIKYDGFTPLYFSIAKNRLEMVNFLIAHGADVNHKTILGFTPLSFASQQGYLDIVNTLIA 119

Query: 145 KKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAV 204
             AD+  K   + TP+   + N   D      I+++ IE G +V   +      PLH AV
Sbjct: 120 NGADLSTKTDKLNTPLHLAAENGHLD------IVNVFIEKGLDVN-AVNNDRARPLHSAV 172

Query: 205 VKKNLSVVELLIKCKADTNL--------IVKVNQEPLLFFAIESNSVKIVEAFLNSKNFD 256
              NL VV+ LI   ++ N          V  N  P L    ++  + IV+  L +   +
Sbjct: 173 QNGNLEVVKALISQGSNINAGSSGIGNHKVDANITP-LHLGTQTGRLDIVKVLLEA-GAN 230

Query: 257 VSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAE 316
           V+    D  + LH A   G L++V +L+K K ++NA++   L P+  A    R H  V +
Sbjct: 231 VNAKTDDKITPLHLASQNGFLELVDILLKAKSNVNAKDYENLTPLHLA--AERNHFGVVK 288

Query: 317 YLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLD---QIIKRIIDRTENINA 373
            LL    I+VN                KD    +   I   +   +++K +I++  N+NA
Sbjct: 289 SLLLVRGIDVN---------------AKDHDNSTALHIGSQNGHLEVVKLLIEKKANVNA 333

Query: 374 EGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQK-AFISDARSSDFCF-------- 424
           + ++  TPL  A +    + + +LI+ GAN+N  + Q    + +A  + F          
Sbjct: 334 KKNEGFTPLHLAIQQSHFEVSDFLIKNGANINTVDDQNWTPLHNAAYNGFSLKIVESLIA 393

Query: 425 ------------RSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDF 472
                       R AL  A +H N++E++  L+ +GAD+N   N+    PL  A   G+ 
Sbjct: 394 KGANINAKMDDGRRALHLAAEH-NHLEIMNFLIENGADINALDNR-SWTPLHCAAYDGNL 451

Query: 473 QIVKELQNYGAQIDKENYLKNKEAARIA--HSTTE-----LEERKKINDLLKLNLDFLKN 525
           ++ K L + GA I+ +  +K+      A  H   E     LE+   IN L   N   L  
Sbjct: 452 EVAKSLLDKGADINAKT-VKSTTPLHFAVDHDHLEVVELLLEKEADINALDHTNWTPLHF 510

Query: 526 VRSNKYDEVKKN-IEDGACVNV-SSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSAT 583
                YD++    ++ GA VNV  ++ +G+AL   A  G+ ++V  L+ NGADVN K   
Sbjct: 511 AAEKGYDQIATVLLKHGADVNVKENQNKGTALHLAAQYGHPKVVKTLIINGADVNAKMDK 570

Query: 584 GFTALHMACRFHSNDNIVRKLLHHGAYYDMK-DGKTGKTPLKHAEAGKNRDIIDLLHLID 642
             T LH+  +   N +IVR LL  GAY++ + +G     PL  AE   N ++I LL L++
Sbjct: 571 NATPLHLGAQI-GNLDIVRSLLMSGAYFNARAEGGRYVLPLHFAERRGNPEVIKLLKLVE 629

Query: 643 NLFASV 648
            LF ++
Sbjct: 630 KLFKAI 635

Source: Wolbachia endosymbiont of Cadra cautella

Species: Wolbachia endosymbiont of Cadra cautella

Genus: Wolbachia

Family: Anaplasmataceae

Order: Rickettsiales

Class: Alphaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

>gi|123507472|ref|XP_001329422.1| ankyrin repeat protein [Trichomonas vaginalis G3] gi|121912377|gb|EAY17199.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 176/619 (28%), Positives = 283/619 (45%), Gaps = 78/619 (12%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           T L  A  +N    VE L+S G  ++NEK  DG+TAL+ A      + +  LI HGAN+N
Sbjct: 159 TALRIAAENNSKETVELLISHGA-NINEKDNDGQTALHYAARSNSKEYIEFLISHGANIN 217

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTP---------------ILA 162
           ++D  G T LH A     K  V+ L+S  A++  K     T                +++
Sbjct: 218 EKDNDGATVLHYAARSNRKETVELLISHGANINEKDKNGATVLHYAASNNRKETVELLIS 277

Query: 163 VSANMSEDSTD------------TNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLS 210
             AN++E   D            + E + +LI +GAN+ EK      + LH+A    +  
Sbjct: 278 HGANINEKDNDGQTVLPYAARSNSKETVELLISHGANINEK-DNNGQTALHYAARSNSKE 336

Query: 211 VVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHK 270
            +E LI   A+ N     N    L  A  SNS + +E FL S   +++  D D  ++LH 
Sbjct: 337 YIEFLISHGANINE-KDNNGATALHIAARSNSKEYIE-FLISHGANINEKDNDGQTVLHY 394

Query: 271 ACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPI 330
           A    + + V++L+    +IN +++Y    + +A    RK T   E L+   + N+N   
Sbjct: 395 AAENNSKETVELLISHGANINEKDKYGTTALPYAASNNRKET--VELLISHGA-NINEKD 451

Query: 331 KRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCD 390
           K    +L                     + I+ +I    NIN + +D  T L +A  +  
Sbjct: 452 KNGATVLHYAAEYNSK------------EYIEFLISHGANINEKDNDGQTVLHYATSNNR 499

Query: 391 LQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGAD 450
            ++ + LI  GAN+N               D    +AL YA +  N+ E V+LL+ HGA+
Sbjct: 500 KETVELLISHGANIN-------------EKDKYGTTALHYAAE-NNSKETVELLISHGAN 545

Query: 451 VNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERK 510
           +N+  N   Q  L  A +S   + V+ L ++GA I++    K+K  A + H   E   ++
Sbjct: 546 INEKDNDG-QTVLPYAARSNRKETVELLISHGANINE----KDKNGATVLHYAAEYNSKE 600

Query: 511 KINDLLK--LNLDFLKN---------VRSNKYDEVKKNIEDGACVNVSSERRGSALIYVA 559
            I  L+    N++   N          RSN  + V+  I  GA +N  ++   + L Y A
Sbjct: 601 YIEFLISHGANINEKDNNGATALRIAARSNSKETVELLISHGANINEKNKNGTTVLHYAA 660

Query: 560 WKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTG 619
               +E V+LL+ +GA++N K   G TAL +A R +S +  V  L+ HGA  + KD K G
Sbjct: 661 SNNRKETVELLISHGANINEKDNNGATALRIAARSNSKE-TVELLISHGANINEKD-KYG 718

Query: 620 KTPLKHAEAGKNRDIIDLL 638
            T L +A +   ++ + LL
Sbjct: 719 TTVLHYAASNNRKETVALL 737

Source: Trichomonas vaginalis G3

Species: Trichomonas vaginalis

Genus: Trichomonas

Family: Trichomonadidae

Order: Trichomonadida

Superkingdom: Eukaryota

>gi|321272302|gb|ADW80187.1| ankyrin repeat protein [Wolbachia endosymbiont wVitA of Nasonia vitripennis phage WOVitA1]

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 188/684 (27%), Positives = 323/684 (47%), Gaps = 83/684 (12%)

Query: 67   NKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTP 126
            N  ++V  LL     +V+ +  DG T L+ A L G    V  LI + A VN +   G TP
Sbjct: 1266 NGSKDVIDLLIKNKAEVDARTNDGMTPLHSAALNGRGDAVVFLIKNKAEVNAKANYGLTP 1325

Query: 127  LHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPI-LAVSANMSEDSTDTNEIISMLIENG 185
            LH A    +K++V  L+  KA V A+     TP+ +AV A   E       I+ +L+ NG
Sbjct: 1326 LHAAVVEDHKDVVNLLIKNKAKVNAEGIAGSTPLHVAVEAGHKE-------IVEILVANG 1378

Query: 186  ANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKI 245
            ANV  K    + +PL  A+   +  +VE+LI   A  N+      EPLL  A+ +    I
Sbjct: 1379 ANVNVKS--NNLTPLLSAIKYNHKEIVEVLIANGASVNV---EGGEPLLL-AVLAGYRDI 1432

Query: 246  VEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAI 305
            VE  L +K + V+    +  +LLH A   G+ +IV  L+ +  +++A       P++ A 
Sbjct: 1433 VEILLRNKAY-VNTKGPENTTLLHLAAKRGHKEIVNALITKGANVDAMTINGTTPLYLAA 1491

Query: 306  GMGRKHTHVAEYLLQQDS----INV-NLPIKRP-----NLLLDTVMS------LKDPKVM 349
              G  H  +AE L+   +    +NV   P+        + +++ ++S      +KD K  
Sbjct: 1492 QEG--HGEIAETLIANRADVNIVNVEGAPLHIAAGHGHDNVVEVLLSNGAKTNVKDNKSR 1549

Query: 350  SQTQIKRLD---QIIKRIID-RTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVN 405
            +  ++       Q++K ++  +  ++NA+G+D  T L  A++  +L+  K L+ +G+N+N
Sbjct: 1550 TSLELAVSHGHLQVVKMLLQYKKVDMNAKGNDDWTILHIASQESNLEMVKCLVDEGSNIN 1609

Query: 406  -----------------LTETQKAFISDARSSD---FCFRSALQYACKHKNNIEMVKLLL 445
                               +T + F+S   S +      ++ L YA   K  +E+VK L+
Sbjct: 1610 AKNASGSKPIHIAAREGYKDTVEFFLSKGLSINELGTANQTLLHYAA-MKGRLEVVKYLI 1668

Query: 446  LHGADVN--DTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHST 503
              GADVN  DT+      P+ +A   G   +++ L   GA  +  +        ++    
Sbjct: 1669 AQGADVNAKDTNG---LTPMHIAANFGYKDVIEVLLKNGAVYNAVD--------KLCRRP 1717

Query: 504  TELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGY 563
             E+   K + +LL       + V+ N   EV+  I+ GA VN  +    + L Y AWKGY
Sbjct: 1718 LEMTNDKDVINLLASTEKLFEAVKRNSSSEVENYIKAGAFVNAKNADSVTPLYYAAWKGY 1777

Query: 564  EEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPL 623
            + +V++LL N A+ N     GFT LH A +F S+  +V+ LL +GA Y+     +GKTP 
Sbjct: 1778 DGVVNILLQNKANPNVVGNKGFTPLHYAAKF-SHLKVVKALLSNGAVYNAV-SDSGKTP- 1834

Query: 624  KHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKN 683
              ++   ++ I  L  L+   F  V    D N     +++N   ++  +   + +   +N
Sbjct: 1835 --SDFTVDKSITSLFKLVSESFKKVK---DGNA----QVINDLNKIKDIDTVKAVMSARN 1885

Query: 684  YAGETLIGVARKMNYSFLERLEEV 707
               +TL+  A   N+S +E+L+++
Sbjct: 1886 RENKTLVVAAVHSNFSKVEQLKQI 1909

Source: Wolbachia endosymbiont wVitA of Nasonia vitripennis phage WOVitA1

Species: Wolbachia endosymbiont wVitA of Nasonia vitripennis phage WOVitA1

Superkingdom: Viruses

>gi|383858766|ref|XP_003704870.1| PREDICTED: uncharacterized protein LOC100882592 [Megachile rotundata]

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 195/684 (28%), Positives = 309/684 (45%), Gaps = 107/684 (15%)

Query: 75   LLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLG 134
            LL   + +VN +  DG T L+ A++ G    V  LI +GA VND D  G+T LH A   G
Sbjct: 1182 LLIQNNAEVNARSNDGITPLHTAVVHGHKDAVIFLIKNGAEVNDIDNFGFTILHSAIIGG 1241

Query: 135  NKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPF 194
            +K++V  L+  KA V A      TP+ A         T   EI+ ML+ NGA+V  K   
Sbjct: 1242 HKDVVNVLIQNKAKVNATGIAGNTPLHAAV------ETGNKEIVQMLVRNGADVNVKNK- 1294

Query: 195  TDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKN 254
             + +PL  AV K    +VE+L+   A+ N     N E LL  AI +    IV   L + N
Sbjct: 1295 DEMTPLSSAVKKNYKKIVEVLVTNGANVN---AKNGEALLI-AIFAGFRDIVNILLEN-N 1349

Query: 255  FDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHV 314
              ++I   +  + LH A   G+ +IV  L+ +  +I+A       P+  A+    K   V
Sbjct: 1350 ARINIKCSENVTPLHLAVERGHTEIVNTLISKGANIHATAATGATPLHLAVQKANKEI-V 1408

Query: 315  AEYLLQQDSINVNLPIKRP--------------NLLLDTV--MSLKDPK-------VMSQ 351
               LL+   +NVN     P               +LL+    +++KD K        ++ 
Sbjct: 1409 ELLLLKGAKVNVNSINGTPLHLAVGEYGHVDIVRILLNNGANINIKDLKNRMPFELAVAH 1468

Query: 352  TQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQK 411
             Q++ +  ++ R  ++  +INA+ +D  T L  A +  +L+  KYLI KG+++N+     
Sbjct: 1469 NQLESVKLLLAR--NKKIDINAKINDTWTVLHIATQEGNLEMIKYLIDKGSDINIRNA-- 1524

Query: 412  AFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGD 471
               S ++      R   +         ++V+  L  G +++D      Q  L  A  +G 
Sbjct: 1525 ---SGSKPIHIAAREGFK---------DIVEFFLNKGLNIHDPGT-ANQTLLHYAAMTGQ 1571

Query: 472  FQIVKELQNYGAQIDKE----------------NY-----LKN----KEAARIAHSTTEL 506
             ++VK L + GA I+ +                NY     L+N        +      ++
Sbjct: 1572 LEVVKYLISEGANINTQDANGLTPLHFAANFDYNYVVEVLLQNGAIYNTLDKFCRKPLDM 1631

Query: 507  EERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNV---SSERRGSALIYVAWKGY 563
                K+   L       + V+ N   +V+K I+ GA VN    S    G++L Y AWKGY
Sbjct: 1632 ASDSKVIIPLISTEKLFEAVKHNNASQVEKCIKSGAFVNAKYASKGYDGTSLHYAAWKGY 1691

Query: 564  EEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPL 623
            +EI+++LL N A+ N   + GFT LH A +F S+  IV  LL +GA Y+      GKTPL
Sbjct: 1692 DEIINILLQNKANPNMAGSKGFTPLHYAAKF-SHLKIVMVLLSNGAVYNAA-SIGGKTPL 1749

Query: 624  KHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKN 683
              A    +++II+LL L++  F +V NP                      +  IM   +N
Sbjct: 1750 DFA---VDKNIINLLKLVNESFKNVKNP--------------------TMIKAIMN-ARN 1785

Query: 684  YAGETLIGVARKMNYSFLERLEEV 707
               ++LI  A   N+S + +LE+V
Sbjct: 1786 RENQSLIVAALNNNFSQITQLEQV 1809

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321272354|gb|ADW80235.1| ankyrin repeat protein [Wolbachia endosymbiont wVitB of Nasonia vitripennis phage WOVitB]

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 187/684 (27%), Positives = 322/684 (47%), Gaps = 83/684 (12%)

Query: 67   NKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTP 126
            N  ++V  LL     +V+ +  DG T L+ A L G    V  LI + A VN +   G TP
Sbjct: 1266 NGSKDVIDLLIKNKAEVDARTNDGMTPLHSAALNGRGDAVVFLIKNKAEVNAKANYGLTP 1325

Query: 127  LHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPI-LAVSANMSEDSTDTNEIISMLIENG 185
            LH A    +K++V  L+  KA V A+     TP+ +AV A   E       I+ +L+ NG
Sbjct: 1326 LHAAVVEDHKDVVNLLIKNKAKVNAEGIAGSTPLHVAVEAGHKE-------IVEILVANG 1378

Query: 186  ANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKI 245
            ANV  K    + +PL  A+   +  +VE+L    A  N+      EPLL  A+ +    I
Sbjct: 1379 ANVNVKS--NNLTPLLSAIKXNHKEIVEVLXXNGASVNV---EGGEPLLL-AVLAGYRDI 1432

Query: 246  VEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAI 305
            VE  L +K + V+    +  +LLH A   G+ +IV  L+ +  +++A       P++ A 
Sbjct: 1433 VEILLRNKAY-VNTKGPENTTLLHLAAKRGHKEIVNALITKGANVDAMTINGTTPLYLAA 1491

Query: 306  GMGRKHTHVAEYLLQQDS----INV-NLPIKRP-----NLLLDTVMS------LKDPKVM 349
              G  H  +AE L+   +    +NV   P+        + +++ ++S      +KD K  
Sbjct: 1492 QEG--HGEIAETLIANRADVNIVNVEGAPLHIAAGHGHDNVVEVLLSNGAKTNVKDNKSR 1549

Query: 350  SQTQIKRLD---QIIKRIID-RTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVN 405
            +  ++       Q++K ++  +  ++NA+G+D  T L  A++  +L+  K L+ +G+N+N
Sbjct: 1550 TSLELAVSHGHLQVVKMLLQYKKVDMNAKGNDDWTILHIASQESNLEMVKCLVDEGSNIN 1609

Query: 406  -----------------LTETQKAFISDARSSD---FCFRSALQYACKHKNNIEMVKLLL 445
                               +T + F+S   S +      ++ L YA   K  +E+VK L+
Sbjct: 1610 AKNASGSKPIHIAAREGYKDTVEFFLSKGLSINELGTANQTLLHYAA-MKGRLEVVKYLI 1668

Query: 446  LHGADVN--DTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHST 503
              GADVN  DT+      P+ +A   G   +++ L   GA  +  +        ++    
Sbjct: 1669 AQGADVNAKDTNG---LTPMHIAANFGYKDVIEVLLKNGAVYNAVD--------KLCRRP 1717

Query: 504  TELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGY 563
             E+   K + +LL       + V+ N   EV+  I+ GA VN  +    + L Y AWKGY
Sbjct: 1718 LEMTNDKDVINLLASTEKLFEAVKRNSSSEVENYIKAGAFVNAKNADSVTPLYYAAWKGY 1777

Query: 564  EEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPL 623
            + +V++LL N A+ N     GFT LH A +F S+  +V+ LL +GA Y+     +GKTP 
Sbjct: 1778 DGVVNILLQNKANPNVVGNKGFTPLHYAAKF-SHLKVVKALLSNGAVYNAV-SDSGKTP- 1834

Query: 624  KHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKN 683
              ++   ++ I  L  L+   F  V    D N     +++N   ++  +   + +   +N
Sbjct: 1835 --SDFTVDKSITSLFKLVSESFKKVK---DGNA----QVINDLNKIKDIDTVKAVMSARN 1885

Query: 684  YAGETLIGVARKMNYSFLERLEEV 707
               +TL+  A   N+S +E+L+++
Sbjct: 1886 RENKTLVVAAVHSNFSKVEQLKQI 1909

Source: Wolbachia endosymbiont wVitB of Nasonia vitripennis phage WOVitB

Species: Wolbachia endosymbiont wVitB of Nasonia vitripennis phage WOVitB

Superkingdom: Viruses

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	710
ZFIN|ZDB-GENE-091113-6	1923	si:ch211-263m18.3 "si:ch211-26	0.869	0.320	0.252	3.4e-29
UNIPROTKB|F1NA51	2890	ANK3 "Uncharacterized protein"	0.874	0.214	0.256	5.5e-28
UNIPROTKB|F1MY81	1136	ANK1 "Uncharacterized protein"	0.873	0.545	0.250	3.1e-27
ASPGD|ASPL0000062824	1030	AN1130 [Emericella nidulans (t	0.547	0.377	0.266	3.3e-27
UNIPROTKB|F1NJ80	1699	ANK3 "Uncharacterized protein"	0.874	0.365	0.256	3.7e-27
UNIPROTKB|F1NNX8	1737	ANK3 "Uncharacterized protein"	0.874	0.357	0.256	4e-27
ZFIN|ZDB-GENE-081104-19	1929	si:ch211-173b16.3 "si:ch211-17	0.870	0.320	0.248	4.1e-27
UNIPROTKB|F1NNX6	1824	ANK3 "Uncharacterized protein"	0.874	0.340	0.256	4.5e-27
UNIPROTKB|F1NNX7	1915	ANK3 "Uncharacterized protein"	0.874	0.324	0.256	5.2e-27
UNIPROTKB|F1M5N3	3838	Ank2 "Protein Ank2" [Rattus no	0.698	0.129	0.265	3.3e-26

ZFIN|ZDB-GENE-091113-6 si:ch211-263m18.3 "si:ch211-263m18.3" [Danio rerio (taxid:7955)]

 Score = 361 (132.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 176/698 (25%), Positives = 294/698 (42%)

Query:    46 IINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDH-DVNEKLQDGRTALYMAILQGLYK 104
             +IN  +   V L  L  A  ++  R    LL    + DV  K   G T L++A       
Sbjct:   196 LINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKT--GFTPLHIAAHYENLS 253

Query:   105 MVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVS 164
             +  LL++ GANVN   + G TPLH+A   GN  +V+ LL + A + AK    +TP+   +
Sbjct:   254 VAQLLLNRGANVNFTPKNGITPLHIASRRGNVIMVRLLLDRGAQIDAKTKDELTPLHCAA 313

Query:   165 ANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNL 224
              N          ++ +L++ GA ++ K      SP+H A    ++  V  L++  A+ + 
Sbjct:   314 RNGHV------RVVEILLDQGAPLQAKTK-NGLSPIHMAAQGDHMDCVRQLLQYNAEIDD 366

Query:   225 IVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSL--LHKACHVGNLQIVQM 282
             I   +  PL   A      ++V+  L+        +   LN    LH AC   +++ + +
Sbjct:   367 ITLDHLTPL-HVAAHCGHHRMVKVLLDK---GAKANARALNGFTPLHIACKKNHMRSMDL 422

Query:   283 LVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQD-SINV-NLPIKRP------- 333
             L+K    + A     L P+  A  MG  H ++ + LLQ+  S N  N+ ++ P       
Sbjct:   423 LLKHSASLEAVTESGLTPLHVAAFMG--HLNIVKSLLQRGASPNASNVKVETPLHMAARA 480

Query:   334 ------NLLLDTVMSLKDPKVMS-QTQIK---RLD--QIIKRIIDRTENINAEGDDMITP 381
                     LL     + D K    QT +    R+   +++K +++   N ++      TP
Sbjct:   481 GHCEVAQFLLQNNAQV-DAKAKDDQTPLHCAARMGHKELVKLLMEHKANPDSATTAGHTP 539

Query:   382 LLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMV 441
             L  AA+    Q+ + L+ + A      T+K F            + L  ACK+   +++V
Sbjct:   540 LHIAAREGHAQTTRILLDENAQ-QTKMTKKGF------------TPLHVACKY-GKVDVV 585

Query:   442 KLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAA-RIA 500
             +LLL  GA+ N  + K    PL VA+   +  +VK L + G      +  +N   A  IA
Sbjct:   586 ELLLERGANPN-AAGKNGLTPLHVAVHHNNLDVVKLLVSKGGS--PHSTARNGYTALHIA 642

Query:   501 HSTTELEERXXXXXXXXXXXXXXX--------XVRSNKYDEVKKNIEDGACVNVSSERRG 552
                 +LE                           +  + D V   I   A VN+ ++   
Sbjct:   643 AKQNQLEVASSLLQYGANANSESLQGITPLHLASQEGQPDMVALLISKQANVNLGNKNGL 702

Query:   553 SALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYD 612
             + L  VA +G+  I D+L+  GA V   S  G+T LH+AC +  N  +V+ LL   A+ +
Sbjct:   703 TPLHLVAQEGHVGIADMLVKQGASVYAASRMGYTPLHVACHY-GNIKMVKFLLQQQAHVN 761

Query:   613 MKDGKTGKTPLKHAEAGKNRXXXXXXXXXXNLFAS--VTNPYDPNVYHRIELMNSAKQLG 670
              K  + G TPL H  A +                +   TN   P        +  AK+LG
Sbjct:   762 SKT-RLGYTPL-HQAAQQGHTDIVTLLLKHGALPNEITTNGTSP--------LGIAKRLG 811

Query:   671 LVHVFEIMKVVKNYAGETLIGVARKMNYSFLERLEEVL 708
              + V +++K+V   +   +     K   SF E ++E+L
Sbjct:   812 YISVIDVLKLVTEESVSMI--TTEKHRMSFPETVDEIL 847

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1NA51 ANK3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 352 (129.0 bits), Expect = 5.5e-28, P = 5.5e-28
 Identities = 177/690 (25%), Positives = 285/690 (41%)

Query:    48 NSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVT 107
             N +  K V L  L  A   +  +    LL   DH+ + + + G T L++A   G   + T
Sbjct:   195 NDTKGK-VRLPALHIAARKDDTKAAALLLQN-DHNADVESKSGFTPLHIAAHYGNINVAT 252

Query:   108 LLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANM 167
             LL++ GA V+       TPLH+A   GN N+VK LL + A + AK    +TP L   A  
Sbjct:   253 LLLNRGAAVDFTARNDITPLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTP-LHCGARS 311

Query:   168 SEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVK 227
               +     +++ ML++ GA +  K      SPLH A    +L+ V+LLI+     + +  
Sbjct:   312 GHE-----QVVEMLLDRGAPILSKTK-NGLSPLHMATQGDHLNCVQLLIQHNVPVDDVTN 365

Query:   228 VNQEPLLFFAIESNSVKIVEAFLNSK-NFDVSISDGDLNSLLHKACHVGNLQIVQMLVKR 286
              +    L  A      K+ +  L+ K N +    +G   + LH AC    ++++++L+K 
Sbjct:   366 -DYLTALHVAAHCGHYKVAKVLLDKKANPNAKALNGF--TPLHIACKKNRIKVMELLLKH 422

Query:   287 KFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDP 346
                I A     L P+  A  MG  H ++   L+   + + N    R    L         
Sbjct:   423 GASIQAVTESGLTPIHVAAFMG--HVNIVSQLMHHGA-SPNTTNVRGETALHMAARAGQT 479

Query:   347 KVM-------SQTQIKRLDQ--------------IIKRIIDRTENINAEGDDMITPLLFA 385
             +V+       +Q + K  D               I+++++ +  + NA      TPL  +
Sbjct:   480 EVVRYLVQNGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLS 539

Query:   386 AKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLL 445
             A+      A  L++ GA++ +  T+K F            + L  A K+   IE+  LLL
Sbjct:   540 AREGHEDVASVLLEHGASLAII-TKKGF------------TPLHVAAKY-GKIEVANLLL 585

Query:   446 LHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQID---KENYLKNKEAAR---I 499
                A   D S K    PL VA    + ++   L + GA      K  Y     AA+   +
Sbjct:   586 QKNASP-DASGKSGLTPLHVAAHYDNQKVALLLLDQGASPHASAKNGYTPLHIAAKKNQM 644

Query:   500 AHSTTELEERXXXXXXXXXXXXXXXXVRSNKY-DEVKKNIEDGACVNVSSERRGSALIYV 558
               +TT LE                     + + D V   +   A VN+S++   + L   
Sbjct:   645 DIATTLLEYGADANAVTRQGIAPVHLASQDGHVDMVSLLLTRNANVNLSNKSGLTPLHLA 704

Query:   559 AWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKT 618
             A +    + ++L++ GA V+ ++  G+T LH+ C +  N  IV  LL H A  + K  K 
Sbjct:   705 AQEDRVNVAEVLVNQGAAVDAQTKMGYTPLHVGCHY-GNIKIVNFLLQHSAKINAKT-KN 762

Query:   619 GKTPLKHAEAGKNRXXXXXXXXXXNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIM 678
             G TPL H  A +             L      P +  V     L   AK+LG + V + +
Sbjct:   763 GYTPL-HQAAQQGHTHIINV-----LLQHGAAPNELTVNGNTALA-IAKRLGYISVVDTL 815

Query:   679 KVVKNYAGETLIGVARKMNYSFLERLEEVL 708
             KVV      T I V  K   +  E + EVL
Sbjct:   816 KVVTEET-MTTITVTEKHKMNVPETMNEVL 844

GO:0000281 "cytokinesis after mitosis" evidence=IEA

GO:0005200 "structural constituent of cytoskeleton" evidence=IEA

GO:0005923 "tight junction" evidence=IEA

GO:0007411 "axon guidance" evidence=IEA

GO:0009925 "basal plasma membrane" evidence=IEA

GO:0014704 "intercalated disc" evidence=IEA

GO:0016328 "lateral plasma membrane" evidence=IEA

GO:0019228 "regulation of action potential in neuron" evidence=IEA

GO:0033268 "node of Ranvier" evidence=IEA

GO:0042383 "sarcolemma" evidence=IEA

GO:0043001 "Golgi to plasma membrane protein transport" evidence=IEA

GO:0043194 "axon initial segment" evidence=IEA

GO:0045202 "synapse" evidence=IEA

GO:0050808 "synapse organization" evidence=IEA

GO:0071709 "membrane assembly" evidence=IEA

GO:0072660 "maintenance of protein location in plasma membrane" evidence=IEA

GO:0072661 "protein targeting to plasma membrane" evidence=IEA

UNIPROTKB|F1MY81 ANK1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 340 (124.7 bits), Expect = 3.1e-27, P = 3.1e-27
 Identities = 174/695 (25%), Positives = 290/695 (41%)

Query:    46 IINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDH-DVNEKLQDGRTALYMAILQGLYK 104
             +IN  +   V L  L  A  ++  R    LL    + DV  K   G T L++A       
Sbjct:   162 LINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKT--GFTPLHIAAHYENLN 219

Query:   105 MVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVS 164
             +  LL++ GA+VN   + G TPLH+A   GN  +V+ LL + A +  +    +TP+   +
Sbjct:   220 VAQLLLNRGASVNFTPQNGITPLHIASRRGNVIMVRLLLDRGAQIETRTKDELTPLHCAA 279

Query:   165 ANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNL 224
              N          I  +L+++GA ++ K      SP+H A    +L  V LL++  A+ + 
Sbjct:   280 RN------GHLRISEILLDHGAPIQAKTK-NGLSPIHMAAQGDHLDCVRLLLQYNAEIDD 332

Query:   225 IVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSL--LHKACHVGNLQIVQM 282
             I   +  PL   A      ++ +  L+        +   LN    LH AC   +++++++
Sbjct:   333 ITLDHLTPL-HVAAHCGHHRVAKVLLDK---GAKPNSRALNGFTPLHIACKKNHIRVMEL 388

Query:   283 LVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQD-SINVNLPIKRPNLLLDTVM 341
             L+K    I+A     L P+  A  MG  H  + + LLQ++ S NV+      N+ ++T +
Sbjct:   389 LLKMGASIDAVTESGLTPLHVASFMG--HLPIVKSLLQREASPNVS------NVKVETPL 440

Query:   342 SLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKG 401
              +        T++       K ++     +NA+  D  TPL  AA+       K L++  
Sbjct:   441 HMAARA--GHTEVA------KYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENN 492

Query:   402 ANVNLTET----------QKAFISDA------RSSDFCFR----SALQYACKHKNNIEMV 441
             AN NL  T          ++  +  A       +S  C      + L  A K+   + M 
Sbjct:   493 ANPNLATTAGHTPLHIAAREGHVETALALLEKEASQTCMTKKGFTPLHVAAKY-GKVRMA 551

Query:   442 KLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAH 501
             +LLL H A  N  + K    PL VA+      +V+ L   G        L       IA 
Sbjct:   552 ELLLEHDAHPN-AAGKSGLTPLHVAVHHNHLDVVRLLLPRGGS-PHSPALNGYTPLHIAA 609

Query:   502 STTELE-ERXXXXXXXXXXXXXXXXV-------RSNKYDEVKKNIEDGACVNVSSERRGS 553
                +LE  R                V       +    + V   +   A  N+ ++   +
Sbjct:   610 KQNQLEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLT 669

Query:   554 ALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDM 613
              L  VA +G+  + D+L+ +G  V+  +  G+T LH+A  +  N  +V+ LL H A  + 
Sbjct:   670 PLHLVAQEGHIPVADVLIKHGVTVDATTRMGYTPLHVASHY-GNIKLVKFLLQHKADVNA 728

Query:   614 KDGKTGKTPLKHAEAGKNRXXXXXXXXXXNLFASVTNPYDPNVYHRIELMNSAKQLGLVH 673
             K  K G +PL H  A +               AS  N    N    + +   AK+LG + 
Sbjct:   729 KT-KLGYSPL-HQAAQQGHTDIVTLLLKHG--AS-PNEVSSNGTTPLAI---AKRLGYIS 780

Query:   674 VFEIMKVVKNYAGETLIGVARKMNYSFLERLEEVL 708
             V +++KVV +     LI    +M  SF E ++E+L
Sbjct:   781 VTDVLKVVTDETTVQLITDKHRM--SFPETVDEIL 813

GO:0072661 "protein targeting to plasma membrane" evidence=IEA

GO:0051117 "ATPase binding" evidence=IEA

GO:0048821 "erythrocyte development" evidence=IEA

GO:0030863 "cortical cytoskeleton" evidence=IEA

GO:0030507 "spectrin binding" evidence=IEA

GO:0015672 "monovalent inorganic cation transport" evidence=IEA

GO:0014731 "spectrin-associated cytoskeleton" evidence=IEA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA

GO:0006779 "porphyrin-containing compound biosynthetic process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

ASPGD|ASPL0000062824 AN1130 [Emericella nidulans (taxid:162425)]

 Score = 271 (100.5 bits), Expect = 3.3e-27, Sum P(2) = 3.3e-27
 Identities = 116/436 (26%), Positives = 194/436 (44%)

Query:    75 LLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLG 134
             LL   D D+N K   GRT L  A   G   +V L + HGA  + + + G TPL  A   G
Sbjct:   559 LLKERDCDLNLKDFQGRTPLSHAASNGHESVVKLFLQHGAQADSKTDSGQTPLIFAVVHG 618

Query:   135 NKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPF 194
             ++++VK LL   A   +K     TP L+ +A+  ++S     ++ +L+++GA    K   
Sbjct:   619 HESVVKLLLQHGAQADSKTISGKTP-LSYAASKGKES-----VVRLLLQHGAQADSKNN- 671

Query:   195 TDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKN 254
             T  +P+ +A  K + SVV LL+   A  +      Q PL   A + +   +V  FL    
Sbjct:   672 TGQTPISYAASKGHESVVRLLLTHGAQADSKANWGQTPLSRAAFDGHE-SVVRLFLEH-G 729

Query:   255 FDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHV 314
                   DGD  + L  A   G+  +V++L+K     ++++     P+ +A   G  +  V
Sbjct:   730 AQADCKDGDGGTPLSSAAATGHESVVRLLLKHGAQADSKDDDCRTPLSYAASNG--YESV 787

Query:   315 AEYLLQQ----DSINVNL--PIKRP---------NLLLD----TVMSLKDPKV-MSQTQI 354
              + LL+     DS + +   P+             LLL+    T    KD +  +S    
Sbjct:   788 VKLLLEHGARADSKDDDFRTPLSYAASYGYESVVKLLLEHGARTDSKDKDSQTPLSYAAS 847

Query:   355 KRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFI 414
             +  + +++ +++     N+   D  TPL +AA        + L+Q GA  + +ET     
Sbjct:   848 RGYESVVRILLENGARANSRDKDSHTPLSYAASKGHESVVRLLLQYGAQAD-SETSSG-- 904

Query:   415 SDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQI 474
                       ++ L YA  H +   +VKLLL HGA   ++ +K    PL  A   G    
Sbjct:   905 ----------QTPLSYAASHGHEF-VVKLLLDHGAQT-ESKDKYGWTPLVYAAIWGQESA 952

Query:   475 VKELQNYGAQID-KEN 489
             V+ L  +GA+ + K+N
Sbjct:   953 VRLLLEHGAEAELKDN 968

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|F1NJ80 ANK3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 352 (129.0 bits), Expect = 3.7e-27, Sum P(2) = 3.7e-27
 Identities = 177/690 (25%), Positives = 285/690 (41%)

Query:    48 NSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVT 107
             N +  K V L  L  A   +  +    LL   DH+ + + + G T L++A   G   + T
Sbjct:   153 NDTKGK-VRLPALHIAARKDDTKAAALLLQN-DHNADVESKSGFTPLHIAAHYGNINVAT 210

Query:   108 LLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANM 167
             LL++ GA V+       TPLH+A   GN N+VK LL + A + AK    +TP L   A  
Sbjct:   211 LLLNRGAAVDFTARNDITPLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTP-LHCGARS 269

Query:   168 SEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVK 227
               +     +++ ML++ GA +  K      SPLH A    +L+ V+LLI+     + +  
Sbjct:   270 GHE-----QVVEMLLDRGAPILSKTK-NGLSPLHMATQGDHLNCVQLLIQHNVPVDDVTN 323

Query:   228 VNQEPLLFFAIESNSVKIVEAFLNSK-NFDVSISDGDLNSLLHKACHVGNLQIVQMLVKR 286
              +    L  A      K+ +  L+ K N +    +G   + LH AC    ++++++L+K 
Sbjct:   324 -DYLTALHVAAHCGHYKVAKVLLDKKANPNAKALNGF--TPLHIACKKNRIKVMELLLKH 380

Query:   287 KFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDP 346
                I A     L P+  A  MG  H ++   L+   + + N    R    L         
Sbjct:   381 GASIQAVTESGLTPIHVAAFMG--HVNIVSQLMHHGA-SPNTTNVRGETALHMAARAGQT 437

Query:   347 KVM-------SQTQIKRLDQ--------------IIKRIIDRTENINAEGDDMITPLLFA 385
             +V+       +Q + K  D               I+++++ +  + NA      TPL  +
Sbjct:   438 EVVRYLVQNGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLS 497

Query:   386 AKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLL 445
             A+      A  L++ GA++ +  T+K F            + L  A K+   IE+  LLL
Sbjct:   498 AREGHEDVASVLLEHGASLAII-TKKGF------------TPLHVAAKY-GKIEVANLLL 543

Query:   446 LHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQID---KENYLKNKEAAR---I 499
                A   D S K    PL VA    + ++   L + GA      K  Y     AA+   +
Sbjct:   544 QKNASP-DASGKSGLTPLHVAAHYDNQKVALLLLDQGASPHASAKNGYTPLHIAAKKNQM 602

Query:   500 AHSTTELEERXXXXXXXXXXXXXXXXVRSNKY-DEVKKNIEDGACVNVSSERRGSALIYV 558
               +TT LE                     + + D V   +   A VN+S++   + L   
Sbjct:   603 DIATTLLEYGADANAVTRQGIAPVHLASQDGHVDMVSLLLTRNANVNLSNKSGLTPLHLA 662

Query:   559 AWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKT 618
             A +    + ++L++ GA V+ ++  G+T LH+ C +  N  IV  LL H A  + K  K 
Sbjct:   663 AQEDRVNVAEVLVNQGAAVDAQTKMGYTPLHVGCHY-GNIKIVNFLLQHSAKINAKT-KN 720

Query:   619 GKTPLKHAEAGKNRXXXXXXXXXXNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIM 678
             G TPL H  A +             L      P +  V     L   AK+LG + V + +
Sbjct:   721 GYTPL-HQAAQQGHTHIINV-----LLQHGAAPNELTVNGNTALA-IAKRLGYISVVDTL 773

Query:   679 KVVKNYAGETLIGVARKMNYSFLERLEEVL 708
             KVV      T I V  K   +  E + EVL
Sbjct:   774 KVVTEET-MTTITVTEKHKMNVPETMNEVL 802

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1NNX8 ANK3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 352 (129.0 bits), Expect = 4.0e-27, Sum P(2) = 4.0e-27
 Identities = 177/690 (25%), Positives = 285/690 (41%)

Query:    48 NSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVT 107
             N +  K V L  L  A   +  +    LL   DH+ + + + G T L++A   G   + T
Sbjct:   153 NDTKGK-VRLPALHIAARKDDTKAAALLLQN-DHNADVESKSGFTPLHIAAHYGNINVAT 210

Query:   108 LLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANM 167
             LL++ GA V+       TPLH+A   GN N+VK LL + A + AK    +TP L   A  
Sbjct:   211 LLLNRGAAVDFTARNDITPLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTP-LHCGARS 269

Query:   168 SEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVK 227
               +     +++ ML++ GA +  K      SPLH A    +L+ V+LLI+     + +  
Sbjct:   270 GHE-----QVVEMLLDRGAPILSKTK-NGLSPLHMATQGDHLNCVQLLIQHNVPVDDVTN 323

Query:   228 VNQEPLLFFAIESNSVKIVEAFLNSK-NFDVSISDGDLNSLLHKACHVGNLQIVQMLVKR 286
              +    L  A      K+ +  L+ K N +    +G   + LH AC    ++++++L+K 
Sbjct:   324 -DYLTALHVAAHCGHYKVAKVLLDKKANPNAKALNGF--TPLHIACKKNRIKVMELLLKH 380

Query:   287 KFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDP 346
                I A     L P+  A  MG  H ++   L+   + + N    R    L         
Sbjct:   381 GASIQAVTESGLTPIHVAAFMG--HVNIVSQLMHHGA-SPNTTNVRGETALHMAARAGQT 437

Query:   347 KVM-------SQTQIKRLDQ--------------IIKRIIDRTENINAEGDDMITPLLFA 385
             +V+       +Q + K  D               I+++++ +  + NA      TPL  +
Sbjct:   438 EVVRYLVQNGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLS 497

Query:   386 AKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLL 445
             A+      A  L++ GA++ +  T+K F            + L  A K+   IE+  LLL
Sbjct:   498 AREGHEDVASVLLEHGASLAII-TKKGF------------TPLHVAAKY-GKIEVANLLL 543

Query:   446 LHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQID---KENYLKNKEAAR---I 499
                A   D S K    PL VA    + ++   L + GA      K  Y     AA+   +
Sbjct:   544 QKNASP-DASGKSGLTPLHVAAHYDNQKVALLLLDQGASPHASAKNGYTPLHIAAKKNQM 602

Query:   500 AHSTTELEERXXXXXXXXXXXXXXXXVRSNKY-DEVKKNIEDGACVNVSSERRGSALIYV 558
               +TT LE                     + + D V   +   A VN+S++   + L   
Sbjct:   603 DIATTLLEYGADANAVTRQGIAPVHLASQDGHVDMVSLLLTRNANVNLSNKSGLTPLHLA 662

Query:   559 AWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKT 618
             A +    + ++L++ GA V+ ++  G+T LH+ C +  N  IV  LL H A  + K  K 
Sbjct:   663 AQEDRVNVAEVLVNQGAAVDAQTKMGYTPLHVGCHY-GNIKIVNFLLQHSAKINAKT-KN 720

Query:   619 GKTPLKHAEAGKNRXXXXXXXXXXNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIM 678
             G TPL H  A +             L      P +  V     L   AK+LG + V + +
Sbjct:   721 GYTPL-HQAAQQGHTHIINV-----LLQHGAAPNELTVNGNTALA-IAKRLGYISVVDTL 773

Query:   679 KVVKNYAGETLIGVARKMNYSFLERLEEVL 708
             KVV      T I V  K   +  E + EVL
Sbjct:   774 KVVTEET-MTTITVTEKHKMNVPETMNEVL 802

GO:0007165 "signal transduction" evidence=IEA

ZFIN|ZDB-GENE-081104-19 si:ch211-173b16.3 "si:ch211-173b16.3" [Danio rerio (taxid:7955)]

 Score = 342 (125.4 bits), Expect = 4.1e-27, P = 4.1e-27
 Identities = 173/696 (24%), Positives = 296/696 (42%)

Query:    46 IINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDH-DVNEKLQDGRTALYMAILQGLYK 104
             +IN  +   V L  L  A  ++  R    LL    + DV  K   G T L++A       
Sbjct:   157 LINHGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKT--GFTPLHIAAHYENLN 214

Query:   105 MVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVS 164
             +  LL++ GA+VN   + G TPLH+A   GN  +V+ LL + A + AK    +TP+   +
Sbjct:   215 VAQLLLNRGADVNFTPKNGITPLHIASRRGNVIMVRLLLDRGAKIDAKTKDELTPLHCAA 274

Query:   165 ANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNL 224
              N          II +L++ GA ++ K      SP+H A    +L  +  L++  A+ + 
Sbjct:   275 RNGHV------RIIEILLDQGAPIQAKTK-NGLSPIHMAAQGDHLDCIRQLLQYNAEIDD 327

Query:   225 IVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSL--LHKACHVGNLQIVQM 282
             I   +  PL   A      ++ +  L+        +   LN    LH AC   +++++ +
Sbjct:   328 ITLDHLTPL-HVAAHCGHHRVAKVLLDK---GAKPNTRALNGFTPLHIACKKNHMRVMDL 383

Query:   283 LVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQD-SINV-NLPIKRP------- 333
             L+K    + A     L P+  +  MG  H ++ + L+Q+  S N  N+ ++ P       
Sbjct:   384 LLKHSASLEAVTESGLTPLHVSSFMG--HLNIVKILMQKGASPNASNVKVETPLHMASRA 441

Query:   334 -----NLLLDTVMSLKDPKVMS-QTQI---KRL--DQIIKRIIDRTENINAEGDDMITPL 382
                    LL     + D K    QT +    R+  ++++K +++   N N+      TPL
Sbjct:   442 GHCEVEFLLQNAAPV-DAKAKDDQTPLHCASRMGHNEMVKLLLEHKANSNSTTTAGHTPL 500

Query:   383 LFAAKHCDLQSAKYLIQKGANVNLTE-TQKAFISDARSSDFCFRSALQYACKHKNNIEMV 441
               AA+    Q+A  L+    N  LT+ T+K F            + L  A K+   +++ 
Sbjct:   501 HIAAREGHTQTASILLDM--NAQLTKMTKKGF------------TPLHVAAKY-GKVDVA 545

Query:   442 KLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQ---IDKENY----LKNK 494
              LLL  GA+ N  + K    PL VA+   +  +V  L + G       +  Y    + +K
Sbjct:   546 VLLLERGANPN-AAGKVGLTPLHVAVHHNNLDVVNLLLSKGGSPHSAARNGYTPLHIASK 604

Query:   495 E-AARIAHSTTELEERXXXXXXXXXXXXXXXXVRSNKYDEVKKNIEDGACVNVSSERRGS 553
             +  A +A S  +                     +  + D V   I   A VN+ ++   +
Sbjct:   605 QNQAEVASSLLQ-HGASANAESLQGVTPLHLASQEGQPDMVLLLISKQANVNLGNKSGLT 663

Query:   554 ALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDM 613
              L  VA +G+  I D+L+ +GA V   +  G+T LH+AC +  N  +V+ LL   A  + 
Sbjct:   664 PLHLVAQEGHVGIADILVKHGASVYAATRMGYTPLHVACHY-GNIKMVKFLLQQQANVNC 722

Query:   614 KDGKTGKTPLKHAEAGKNRXXXXXXXXXXNLFASVTNPYDPNVYHRIELMNSAKQLGLVH 673
             K  +   TPL H  A +                +  N    N    + +   AK+LG + 
Sbjct:   723 KT-RMSYTPL-HQAAQQGHTDIVTLLLKHG---AQPNEVTSNGTSALAI---AKRLGYIS 774

Query:   674 VFEIMKVVKNYAGETL-IGVARKMNYSFLERLEEVL 708
             V +++K+V     ET+ +    K   SF E ++E+L
Sbjct:   775 VIDVLKLVTE---ETVTMTTTEKHRMSFPETVDEIL 807

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1NNX6 ANK3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 352 (129.0 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
 Identities = 177/690 (25%), Positives = 285/690 (41%)

Query:    48 NSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVT 107
             N +  K V L  L  A   +  +    LL   DH+ + + + G T L++A   G   + T
Sbjct:   153 NDTKGK-VRLPALHIAARKDDTKAAALLLQN-DHNADVESKSGFTPLHIAAHYGNINVAT 210

Query:   108 LLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANM 167
             LL++ GA V+       TPLH+A   GN N+VK LL + A + AK    +TP L   A  
Sbjct:   211 LLLNRGAAVDFTARNDITPLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTP-LHCGARS 269

Query:   168 SEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVK 227
               +     +++ ML++ GA +  K      SPLH A    +L+ V+LLI+     + +  
Sbjct:   270 GHE-----QVVEMLLDRGAPILSKTK-NGLSPLHMATQGDHLNCVQLLIQHNVPVDDVTN 323

Query:   228 VNQEPLLFFAIESNSVKIVEAFLNSK-NFDVSISDGDLNSLLHKACHVGNLQIVQMLVKR 286
              +    L  A      K+ +  L+ K N +    +G   + LH AC    ++++++L+K 
Sbjct:   324 -DYLTALHVAAHCGHYKVAKVLLDKKANPNAKALNGF--TPLHIACKKNRIKVMELLLKH 380

Query:   287 KFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDP 346
                I A     L P+  A  MG  H ++   L+   + + N    R    L         
Sbjct:   381 GASIQAVTESGLTPIHVAAFMG--HVNIVSQLMHHGA-SPNTTNVRGETALHMAARAGQT 437

Query:   347 KVM-------SQTQIKRLDQ--------------IIKRIIDRTENINAEGDDMITPLLFA 385
             +V+       +Q + K  D               I+++++ +  + NA      TPL  +
Sbjct:   438 EVVRYLVQNGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLS 497

Query:   386 AKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLL 445
             A+      A  L++ GA++ +  T+K F            + L  A K+   IE+  LLL
Sbjct:   498 AREGHEDVASVLLEHGASLAII-TKKGF------------TPLHVAAKY-GKIEVANLLL 543

Query:   446 LHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQID---KENYLKNKEAAR---I 499
                A   D S K    PL VA    + ++   L + GA      K  Y     AA+   +
Sbjct:   544 QKNASP-DASGKSGLTPLHVAAHYDNQKVALLLLDQGASPHASAKNGYTPLHIAAKKNQM 602

Query:   500 AHSTTELEERXXXXXXXXXXXXXXXXVRSNKY-DEVKKNIEDGACVNVSSERRGSALIYV 558
               +TT LE                     + + D V   +   A VN+S++   + L   
Sbjct:   603 DIATTLLEYGADANAVTRQGIAPVHLASQDGHVDMVSLLLTRNANVNLSNKSGLTPLHLA 662

Query:   559 AWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKT 618
             A +    + ++L++ GA V+ ++  G+T LH+ C +  N  IV  LL H A  + K  K 
Sbjct:   663 AQEDRVNVAEVLVNQGAAVDAQTKMGYTPLHVGCHY-GNIKIVNFLLQHSAKINAKT-KN 720

Query:   619 GKTPLKHAEAGKNRXXXXXXXXXXNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIM 678
             G TPL H  A +             L      P +  V     L   AK+LG + V + +
Sbjct:   721 GYTPL-HQAAQQGHTHIINV-----LLQHGAAPNELTVNGNTALA-IAKRLGYISVVDTL 773

Query:   679 KVVKNYAGETLIGVARKMNYSFLERLEEVL 708
             KVV      T I V  K   +  E + EVL
Sbjct:   774 KVVTEET-MTTITVTEKHKMNVPETMNEVL 802

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1NNX7 ANK3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 352 (129.0 bits), Expect = 5.2e-27, Sum P(2) = 5.2e-27
 Identities = 177/690 (25%), Positives = 285/690 (41%)

Query:    48 NSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVT 107
             N +  K V L  L  A   +  +    LL   DH+ + + + G T L++A   G   + T
Sbjct:   153 NDTKGK-VRLPALHIAARKDDTKAAALLLQN-DHNADVESKSGFTPLHIAAHYGNINVAT 210

Query:   108 LLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANM 167
             LL++ GA V+       TPLH+A   GN N+VK LL + A + AK    +TP L   A  
Sbjct:   211 LLLNRGAAVDFTARNDITPLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTP-LHCGARS 269

Query:   168 SEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVK 227
               +     +++ ML++ GA +  K      SPLH A    +L+ V+LLI+     + +  
Sbjct:   270 GHE-----QVVEMLLDRGAPILSKTK-NGLSPLHMATQGDHLNCVQLLIQHNVPVDDVTN 323

Query:   228 VNQEPLLFFAIESNSVKIVEAFLNSK-NFDVSISDGDLNSLLHKACHVGNLQIVQMLVKR 286
              +    L  A      K+ +  L+ K N +    +G   + LH AC    ++++++L+K 
Sbjct:   324 -DYLTALHVAAHCGHYKVAKVLLDKKANPNAKALNGF--TPLHIACKKNRIKVMELLLKH 380

Query:   287 KFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDP 346
                I A     L P+  A  MG  H ++   L+   + + N    R    L         
Sbjct:   381 GASIQAVTESGLTPIHVAAFMG--HVNIVSQLMHHGA-SPNTTNVRGETALHMAARAGQT 437

Query:   347 KVM-------SQTQIKRLDQ--------------IIKRIIDRTENINAEGDDMITPLLFA 385
             +V+       +Q + K  D               I+++++ +  + NA      TPL  +
Sbjct:   438 EVVRYLVQNGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLS 497

Query:   386 AKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLL 445
             A+      A  L++ GA++ +  T+K F            + L  A K+   IE+  LLL
Sbjct:   498 AREGHEDVASVLLEHGASLAII-TKKGF------------TPLHVAAKY-GKIEVANLLL 543

Query:   446 LHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQID---KENYLKNKEAAR---I 499
                A   D S K    PL VA    + ++   L + GA      K  Y     AA+   +
Sbjct:   544 QKNASP-DASGKSGLTPLHVAAHYDNQKVALLLLDQGASPHASAKNGYTPLHIAAKKNQM 602

Query:   500 AHSTTELEERXXXXXXXXXXXXXXXXVRSNKY-DEVKKNIEDGACVNVSSERRGSALIYV 558
               +TT LE                     + + D V   +   A VN+S++   + L   
Sbjct:   603 DIATTLLEYGADANAVTRQGIAPVHLASQDGHVDMVSLLLTRNANVNLSNKSGLTPLHLA 662

Query:   559 AWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKT 618
             A +    + ++L++ GA V+ ++  G+T LH+ C +  N  IV  LL H A  + K  K 
Sbjct:   663 AQEDRVNVAEVLVNQGAAVDAQTKMGYTPLHVGCHY-GNIKIVNFLLQHSAKINAKT-KN 720

Query:   619 GKTPLKHAEAGKNRXXXXXXXXXXNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIM 678
             G TPL H  A +             L      P +  V     L   AK+LG + V + +
Sbjct:   721 GYTPL-HQAAQQGHTHIINV-----LLQHGAAPNELTVNGNTALA-IAKRLGYISVVDTL 773

Query:   679 KVVKNYAGETLIGVARKMNYSFLERLEEVL 708
             KVV      T I V  K   +  E + EVL
Sbjct:   774 KVVTEET-MTTITVTEKHKMNVPETMNEVL 802

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1M5N3 Ank2 "Protein Ank2" [Rattus norvegicus (taxid:10116)]

 Score = 337 (123.7 bits), Expect = 3.3e-26, P = 3.3e-26
 Identities = 148/558 (26%), Positives = 251/558 (44%)

Query:    83 VNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFL 142
             VN   + G T L++A   G   + TLL++ GA V+     G TPLH+A   GN N+VK L
Sbjct:   204 VNRTTESGFTPLHIAAHYGNVNVATLLLNRGAAVDFTARNGITPLHVASKRGNTNMVKLL 263

Query:   143 LSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHF 202
             L +   + AK    +TP L  +A    D     +++ +L+E GA +  +      SPLH 
Sbjct:   264 LDRGGQIDAKTRDGLTP-LHCAARSGHD-----QVVELLLERGAPLLARTK-NGLSPLHM 316

Query:   203 AVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSK-NFDVSISD 261
             A    ++  V+ L++ KA  +  V ++    L  A      ++ +  L+ + N +    +
Sbjct:   317 AAQGDHVECVKHLLQHKAPVD-DVTLDYLTALHVAAHCGHYRVTKLLLDKRANPNARALN 375

Query:   262 GDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQ 321
             G   + LH AC    ++++++LVK    I A     L P+  A  MG  H ++   LLQ 
Sbjct:   376 GF--TPLHIACKKNRIKVMELLVKYGASIQAITESGLTPIHVAAFMG--HLNIVLLLLQN 431

Query:   322 ----DSINVN----LPIKRPNLLLDTVM------SLKDPKVMS-QTQI---KRLD--QII 361
                 D  N+     L +      ++ V       +L D +    QT +    RL   +I+
Sbjct:   432 GASPDVTNIRGETALHMAARAGQVEVVRCLLRNGALVDARAREEQTPLHIASRLGKTEIV 491

Query:   362 KRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSD 421
             + ++    + +A   +  TPL  +A+   +  A  L++ GA  +L  T+K F        
Sbjct:   492 QLLLQHMAHPDAATTNGYTPLHISAREGQVDVASVLLEAGAAHSLA-TKKGF-------- 542

Query:   422 FCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNY 481
                 + L  A K+  ++++ KLLL   A   D++ K    PL +A +    QI   L NY
Sbjct:   543 ----TPLHVAAKY-GSLDVAKLLLQRRAAA-DSAGKNGYTPLHIAAKKNQMQIASTLLNY 596

Query:   482 GAQ---IDKENYLKNKEAARIAHS--TTELEERXXXXXXXXXXXXXXXXVRSNKYDEVKK 536
             GA+   + K+       A++  H+   T L E+                + + + D+V  
Sbjct:   597 GAETNTVTKQGVTPLHLASQEGHTDMVTLLLEKGANIHMSTKSGLTSLHLAAQE-DKV-- 653

Query:   537 NIED-----GACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMA 591
             N+ D     GA  +  ++   + LI     G  ++V+ LL  GA+VN K+  G+T LH A
Sbjct:   654 NVADILTKHGADQDAYTKLGYTPLIVACHYGNVKMVNFLLKQGANVNAKTKNGYTPLHQA 713

Query:   592 CRFHSNDNIVRKLLHHGA 609
              +   + +I+  LL HGA
Sbjct:   714 AQ-QGHTHIINVLLQHGA 730

GO:0007165 "signal transduction" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	710
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	4e-25
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	4e-22
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	5e-18
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	8e-18
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	2e-17
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	5e-17
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-16
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-16
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	3e-15
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	3e-15
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	8e-15
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	8e-15
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	9e-15
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-14
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	1e-14
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-14
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	2e-14
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	8e-14
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	3e-13
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	7e-13
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	7e-13
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	3e-12
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	8e-12
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-11
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	1e-11
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	1e-11
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	4e-11
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	6e-11
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-10
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	2e-10
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	2e-10
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	3e-10
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	3e-10
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	4e-10
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	1e-09
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	3e-09
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	7e-09
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	7e-09
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-08
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	1e-08
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	4e-08
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	5e-08
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	5e-08
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	6e-08
PHA02946	446	PHA02946, PHA02946, ankyin-like protein; Provision	6e-08
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	8e-08
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	1e-07
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	2e-07
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	2e-07
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	3e-07
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	3e-07
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	4e-07
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	4e-07
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	6e-07
pfam00023	33	pfam00023, Ank, Ankyrin repeat	6e-07
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	2e-06
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	3e-06
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	5e-06
PHA02989	494	PHA02989, PHA02989, ankyrin repeat protein; Provis	6e-06
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	7e-06
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	8e-06
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	8e-06
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	8e-06
pfam00023	33	pfam00023, Ank, Ankyrin repeat	1e-05
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	2e-05
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	3e-05
PHA02798	489	PHA02798, PHA02798, ankyrin-like protein; Provisio	3e-05
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	4e-05
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	4e-05
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	1e-04
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	1e-04
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	1e-04
PHA02798	489	PHA02798, PHA02798, ankyrin-like protein; Provisio	1e-04
pfam00023	33	pfam00023, Ank, Ankyrin repeat	2e-04
PHA02798	489	PHA02798, PHA02798, ankyrin-like protein; Provisio	2e-04
smart00248	30	smart00248, ANK, ankyrin repeats	2e-04
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	3e-04
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	3e-04
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	4e-04
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	5e-04
PHA02859	209	PHA02859, PHA02859, ankyrin repeat protein; Provis	6e-04
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	8e-04
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	0.001
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	0.001
pfam00023	33	pfam00023, Ank, Ankyrin repeat	0.002
pfam00023	33	pfam00023, Ank, Ankyrin repeat	0.002
pfam00023	33	pfam00023, Ank, Ankyrin repeat	0.003
pfam00023	33	pfam00023, Ank, Ankyrin repeat	0.003
PHA02798	489	PHA02798, PHA02798, ankyrin-like protein; Provisio	0.003
smart00248	30	smart00248, ANK, ankyrin repeats	0.003
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	0.004
pfam00023	33	pfam00023, Ank, Ankyrin repeat	0.004

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  100 bits (251), Expect = 4e-25
 Identities = 51/134 (38%), Positives = 77/134 (57%), Gaps = 9/134 (6%)

Query: 84  NEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLL 143
           N + +DGRT L++A   G  ++V LL+ +GA+VN +D  G TPLHLA   G+  IVK LL
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60

Query: 144 SKKADVRAKCSMMVTPI-LAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHF 202
            K ADV A+     TP+ LA             +++ +L+++GA+V  +      +PLH 
Sbjct: 61  EKGADVNARDKDGNTPLHLAARNGN-------LDVVKLLLKHGADVNARDKD-GRTPLHL 112

Query: 203 AVVKKNLSVVELLI 216
           A    +L VV+LL+
Sbjct: 113 AAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 92.1 bits (229), Expect = 4e-22
 Identities = 50/126 (39%), Positives = 68/126 (53%), Gaps = 9/126 (7%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           T L  A  +  +  V+ LL  G  DVN K  DGRT L++A   G  ++V LL+  GA+VN
Sbjct: 9   TPLHLAASNGHLEVVKLLLENGA-DVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVN 67

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPI-LAVSANMSEDSTDTNE 176
            RD+ G TPLHLA   GN ++VK LL   ADV A+     TP+ LA             E
Sbjct: 68  ARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNG-------HLE 120

Query: 177 IISMLI 182
           ++ +L+
Sbjct: 121 VVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 79.2 bits (196), Expect = 5e-18
 Identities = 41/93 (44%), Positives = 53/93 (56%), Gaps = 3/93 (3%)

Query: 60  LCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDR 119
           L  A  +  +  V+ LL  G  DVN  L D  TAL++A   G  ++V LL+ HGA+VN +
Sbjct: 1   LHLAAKNGNLELVKLLLEKGA-DVN--LGDTDTALHLAARNGNLEIVKLLLEHGADVNAK 57

Query: 120 DEKGYTPLHLACYLGNKNIVKFLLSKKADVRAK 152
           D+ G T LHLA   GN  IVK LL   AD+  K
Sbjct: 58  DKDGNTALHLAARNGNLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 79.7 bits (197), Expect = 8e-18
 Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 2/113 (1%)

Query: 526 VRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGF 585
             +   + VK  +E+GA VN       + L   A  G+ EIV LLL+ GADVN +   G 
Sbjct: 15  ASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGN 74

Query: 586 TALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
           T LH+A R + N ++V+ LL HGA  + +D K G+TPL  A    + +++ LL
Sbjct: 75  TPLHLAAR-NGNLDVVKLLLKHGADVNARD-KDGRTPLHLAAKNGHLEVVKLL 125

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 86.3 bits (213), Expect = 2e-17
 Identities = 108/447 (24%), Positives = 192/447 (42%), Gaps = 100/447 (22%)

Query: 173 DTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEP 232
           D   I  ML+E GA+V  K  +   +P+H+A  + N  +V LL+   AD N I+ ++   
Sbjct: 156 DELLIAEMLLEGGADVNAKDIYC-ITPIHYAAERGNAKMVNLLLSYGADVN-IIALDDLS 213

Query: 233 LLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINA 292
           +L  A++S ++  ++A +++++   +I+  DL+ L  KA    +L+   +L    F +N+
Sbjct: 214 VLECAVDSKNIDTIKAIIDNRS---NINKNDLSLL--KAIRNEDLETSLLLYDAGFSVNS 268

Query: 293 QNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQT 352
            +     P+  A                                                
Sbjct: 269 IDDCKNTPLHHAS----------------------------------------------- 281

Query: 353 QIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKH-CDLQSAKYLIQKGANVNLTETQK 411
           Q   L +++ ++++R  ++NA+     TPL   AK+  D ++ + LI  GA+VN      
Sbjct: 282 QAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVN------ 335

Query: 412 AFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGD 471
                  ++D  + + L  A     N ++V  LL  GA+VN   +   + P+  A    +
Sbjct: 336 -------AADRLYITPLHQASTLDRNKDIVITLLELGANVN-ARDYCDKTPIHYAAVRNN 387

Query: 472 FQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKY 531
             I+  L +YGA I+  +                    +KI   L   L       +N Y
Sbjct: 388 VVIINTLLDYGADIEALS--------------------QKIGTALHFAL-----CGTNPY 422

Query: 532 DEVKKNIEDGACVNVSSERRGSALIYVAWKGYE-EIVDLLLDNGADVNFKSATGFTALHM 590
             VK  I+ GA VN  ++   + L Y   K  + +++++LLDNGADVN  +      L +
Sbjct: 423 MSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLI 482

Query: 591 ACRFHSNDNIVRKLLHHGAYYDMKDGK 617
           A  +H    IV  LLH+GA  +++D +
Sbjct: 483 ALEYHG---IVNILLHYGA--ELRDSR 504

Length = 682

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 77.4 bits (191), Expect = 5e-17
 Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 4/125 (3%)

Query: 195 TDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKN 254
              +PLH A    +L VV+LL++  AD N      + PL   A ++  ++IV+  L    
Sbjct: 6   DGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPL-HLAAKNGHLEIVKLLLEKGA 64

Query: 255 FDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHV 314
            DV+  D D N+ LH A   GNL +V++L+K   D+NA+++    P+  A   G  H  V
Sbjct: 65  -DVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNG--HLEV 121

Query: 315 AEYLL 319
            + LL
Sbjct: 122 VKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 74.6 bits (184), Expect = 2e-16
 Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 3/90 (3%)

Query: 526 VRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGF 585
            ++   + VK  +E GA VN+      +AL   A  G  EIV LLL++GADVN K   G 
Sbjct: 5   AKNGNLELVKLLLEKGADVNLG--DTDTALHLAARNGNLEIVKLLLEHGADVNAKDKDGN 62

Query: 586 TALHMACRFHSNDNIVRKLLHHGAYYDMKD 615
           TALH+A R + N  IV+ LL HGA  ++KD
Sbjct: 63  TALHLAAR-NGNLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 74.6 bits (184), Expect = 2e-16
 Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 17/108 (15%)

Query: 382 LLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMV 441
           L  AAK+ +L+  K L++KGA+VNL +T                +AL  A ++  N+E+V
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDT---------------DTALHLAARN-GNLEIV 44

Query: 442 KLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
           KLLL HGADVN   +K     L +A ++G+ +IVK L  +GA I+ ++
Sbjct: 45  KLLLEHGADVNAK-DKDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 72.4 bits (178), Expect = 3e-15
 Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 2/86 (2%)

Query: 553 SALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYD 612
           + L   A  G+ E+V LLL+NGADVN K   G T LH+A + + +  IV+ LL  GA  +
Sbjct: 9   TPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAK-NGHLEIVKLLLEKGADVN 67

Query: 613 MKDGKTGKTPLKHAEAGKNRDIIDLL 638
            +D K G TPL  A    N D++ LL
Sbjct: 68  ARD-KDGNTPLHLAARNGNLDVVKLL 92

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 78.5 bits (194), Expect = 3e-15
 Identities = 83/317 (26%), Positives = 120/317 (37%), Gaps = 75/317 (23%)

Query: 106 VTLLIHHGANVNDRDEKGYTPLHLACYLGN-----KNIVKFLLSKKADVRAKCSMMVTPI 160
           V  L+  GA+VN R E G TPLHL  YL       K+IV+ LL   ADV A      TP+
Sbjct: 30  VRRLLAAGADVNFRGEYGKTPLHL--YLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPL 87

Query: 161 --LAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLH-----FAVVKKNLSVVE 213
                +A        T ++I +LI+ GA+V  K      +PLH     F +  K   V+ 
Sbjct: 88  HLYLYNAT-------TLDVIKLLIKAGADVNAKD-KVGRTPLHVYLSGFNINPK---VIR 136

Query: 214 LLIKCKADTNLIVKVNQEPLLFFAIESN-SVKIVEAFLNSKNFDVSISDGDLNSLLHKAC 272
           LL++  AD N +      PL       N +V+++   L     DV   D    SLLH   
Sbjct: 137 LLLRKGADVNALDLYGMTPLAVLLKSRNANVELLR-LLIDAGADVYAVDDRFRSLLHHHL 195

Query: 273 HV--GNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPI 330
                  +IV+ L++   D  A +     P+                             
Sbjct: 196 QSFKPRARIVRELIRAGCDPAATDMLGNTPLH---------------------------- 227

Query: 331 KRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCD 390
                 + T  S K   V           ++   I     INA      TPL +AA   +
Sbjct: 228 -----SMATGSSCKRSLV---------LPLLIAGIS----INARNRYGQTPLHYAAVFNN 269

Query: 391 LQSAKYLIQKGANVNLT 407
            ++ + LI  GA++N  
Sbjct: 270 PRACRRLIALGADINAV 286

Length = 471

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 71.3 bits (175), Expect = 8e-15
 Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 15/119 (12%)

Query: 372 NAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYA 431
           NA  +D  TPL  AA +  L+  K L++ GA+VN               D   R+ L  A
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAK-------------DNDGRTPLHLA 47

Query: 432 CKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENY 490
            K+  ++E+VKLLL  GADVN   +K    PL +A ++G+  +VK L  +GA ++  + 
Sbjct: 48  AKN-GHLEIVKLLLEKGADVNAR-DKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDK 104

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 77.0 bits (190), Expect = 8e-15
 Identities = 73/258 (28%), Positives = 111/258 (43%), Gaps = 29/258 (11%)

Query: 358 DQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDA 417
            + IK II   +  +      + PL  A +  ++   K L+  GA++N            
Sbjct: 15  VKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADIN------------ 62

Query: 418 RSSDFCFRSALQYACKHKNNI----EMVKLLLLHGADVNDTSNKPKQKPLAVAIQ--SGD 471
            SS     + L Y    K N+    E+VKLLL +GA+VN   N     PL  AI   S  
Sbjct: 63  -SSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNN-GITPLLYAISKKSNS 120

Query: 472 FQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKY 531
           + IV+ L + GA +     +KN +   + H   E  +      +LKL +D  K V  N  
Sbjct: 121 YSIVEYLLDNGANV----NIKNSDGENLLHLYLESNKIDL--KILKLLID--KGVDINAK 172

Query: 532 DEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMA 591
           + V   +  G  +N+      + L Y  +    E V  LLD GA+ N  +  G T LH+A
Sbjct: 173 NRVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIA 232

Query: 592 CRFHSNDNIVRKLLHHGA 609
              + N  I + LL++G 
Sbjct: 233 ILNN-NKEIFKLLLNNGP 249

Length = 422

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 77.0 bits (190), Expect = 9e-15
 Identities = 54/225 (24%), Positives = 90/225 (40%), Gaps = 42/225 (18%)

Query: 66  DNKIREVEFLLSTGDHDVNEKLQDGRTAL--YMAILQGLYKMVTLLIHHGANVNDRDEKG 123
              +  ++ L+  G  DVN K + GRT L  Y++      K++ LL+  GA+VN  D  G
Sbjct: 94  ATTLDVIKLLIKAG-ADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYG 152

Query: 124 YTPLHLACYLGNKN----IVKFLLSKKADVRAK--------------------------- 152
            TPL     L ++N    +++ L+   ADV A                            
Sbjct: 153 MTPLA--VLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIR 210

Query: 153 --CSMMVTPILAVSA--NMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKN 208
             C    T +L  +   +M+  S+    ++  L+  G ++  +  +   +PLH+A V  N
Sbjct: 211 AGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRY-GQTPLHYAAVFNN 269

Query: 209 LSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSK 253
                 LI   AD N +      PL    + +N+ + V A L   
Sbjct: 270 PRACRRLIALGADINAVSSDGNTPLS-LMVRNNNGRAVRAALAKN 313

Length = 471

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 69.6 bits (171), Expect = 1e-14
 Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 10/99 (10%)

Query: 94  LYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKC 153
           L++A   G  ++V LL+  GA+VN  D    T LHLA   GN  IVK LL   ADV AK 
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDT--DTALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 154 SMMVTPI-LAVSANMSEDSTDTNEIISMLIENGANVREK 191
               T + LA             EI+ +L+E+GA++  K
Sbjct: 59  KDGNTALHLAARNG-------NLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 77.4 bits (190), Expect = 1e-14
 Identities = 104/393 (26%), Positives = 169/393 (43%), Gaps = 50/393 (12%)

Query: 98  ILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMV 157
           I Q    +  +L+  GA+VN +D    TP+H A   GN  +V  LLS  ADV        
Sbjct: 153 IQQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVN------- 205

Query: 158 TPILAVSA-NMSEDSTDTNEI--ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVEL 214
             I+A+   ++ E + D+  I  I  +I+N +N+ +     D S L  A+  ++L    L
Sbjct: 206 --IIALDDLSVLECAVDSKNIDTIKAIIDNRSNINK----NDLSLLK-AIRNEDLETSLL 258

Query: 215 LIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHV 274
           L       N I      P L  A ++ S+  +   L  +  DV+  +    + L+     
Sbjct: 259 LYDAGFSVNSIDDCKNTP-LHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKN 317

Query: 275 G-NLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRP 333
           G + + ++ L+    D+NA +R ++ P+  A  + R    V   L  +   NVN      
Sbjct: 318 GYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLL--ELGANVN------ 369

Query: 334 NLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCD-LQ 392
                      D   +    ++    II  ++D   +I A    + T L FA    +   
Sbjct: 370 ------ARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYM 423

Query: 393 SAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVN 452
           S K LI +GANVN             S +    + L YACK    ++++++LL +GADVN
Sbjct: 424 SVKTLIDRGANVN-------------SKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVN 470

Query: 453 DTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQI 485
              N   Q PL +A+      IV  L +YGA++
Sbjct: 471 -AINIQNQYPLLIAL--EYHGIVNILLHYGAEL 500

Length = 682

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 68.8 bits (169), Expect = 2e-14
 Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 4/95 (4%)

Query: 200 LHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSI 259
           LH A    NL +V+LL++  AD NL    + +  L  A  + +++IV+  L     DV+ 
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLG---DTDTALHLAARNGNLEIVKLLLE-HGADVNA 56

Query: 260 SDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQN 294
            D D N+ LH A   GNL+IV++L++   DIN ++
Sbjct: 57  KDKDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 75.9 bits (187), Expect = 2e-14
 Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 30/214 (14%)

Query: 63  AVWDNKIREVEFLLSTGDHDVNEKLQDGRTAL-----YMAILQGLYKMVTLLIHHGANVN 117
           A     I  V+ LL  G  D+N   ++  T L         L  + ++V LL+ +GANVN
Sbjct: 42  AKEARNIDVVKILLDNG-ADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVN 100

Query: 118 DRDEKGYTPLHLACY--LGNKNIVKFLLSKKADVRAKCSMMVTPI-LAVSANMSEDSTDT 174
             D  G TPL  A      + +IV++LL   A+V  K S     + L + +N        
Sbjct: 101 APDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESN-----KID 155

Query: 175 NEIISMLIENGANVREK------------MPFTD---FSPLHFAVVKKNLSVVELLIKCK 219
            +I+ +LI+ G ++  K            +   D   F+PLH+AV   N   V+ L+   
Sbjct: 156 LKILKLLIDKGVDINAKNRVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLG 215

Query: 220 ADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSK 253
           A+ NL+ K    P L  AI +N+ +I +  LN+ 
Sbjct: 216 ANPNLVNKYGDTP-LHIAILNNNKEIFKLLLNNG 248

Length = 422

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 74.3 bits (183), Expect = 8e-14
 Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 29/276 (10%)

Query: 66  DNKIREVEFLLSTGDHDVNEKLQDGRTAL--YMAILQGLYK-MVTLLIHHGANVNDRDEK 122
           +  + EV  LL+ G  DVN + + G+T L  Y+       K +V LL+  GA+VN  +  
Sbjct: 24  NVTVEEVRRLLAAGA-DVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERC 82

Query: 123 GYTPLHLACYLGNKN---IVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIIS 179
           G+TPLH   YL N     ++K L+   ADV AK  +  TP+      +S  + +   +I 
Sbjct: 83  GFTPLH--LYLYNATTLDVIKLLIKAGADVNAKDKVGRTPL---HVYLSGFNINPK-VIR 136

Query: 180 MLIENGANVREKMPFTDFSPLHFAVVKKNLSV--VELLIKCKADTNLIVKVNQEPLLFFA 237
           +L+  GA+V     +   +PL   +  +N +V  + LLI   AD   +    +  L    
Sbjct: 137 LLLRKGADVNALDLY-GMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHL 195

Query: 238 IESNSVK----IVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQ--IVQMLVKRKFDIN 291
               S K    IV   L     D + +D   N+ LH      + +  +V  L+     IN
Sbjct: 196 ---QSFKPRARIVRE-LIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISIN 251

Query: 292 AQNRYFLPPMFFAIGMGRKHTHVAEYLLQQ-DSINV 326
           A+NRY   P+ +A      +      L+     IN 
Sbjct: 252 ARNRYGQTPLHYAAVFN--NPRACRRLIALGADINA 285

Length = 471

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 71.9 bits (176), Expect = 3e-13
 Identities = 65/267 (24%), Positives = 115/267 (43%), Gaps = 30/267 (11%)

Query: 64  VWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKG 123
           ++   I  +E ++    + +N  + +  T L  AI  G  K+V L I HGA++N  + K 
Sbjct: 9   IYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKI 68

Query: 124 YTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIE 183
             PL  A  +G  +I+K L+    D     S++  P +              ++I  +++
Sbjct: 69  PHPLLTAIKIGAHDIIKLLIDNGVDT----SILPIPCI------------EKDMIKTILD 112

Query: 184 NGANV----REKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIE 239
            G +V     E   F     LH+A+ K +L  +++L +  AD N I   N    +  AI+
Sbjct: 113 CGIDVNIKDAELKTF-----LHYAIKKGDLESIKMLFEYGADVN-IEDDNGCYPIHIAIK 166

Query: 240 SNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLP 299
            N   I++  L    +  ++ D +  S LH A   G+   +++L+     I  + +    
Sbjct: 167 HNFFDIIKLLLEKGAY-ANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFT 225

Query: 300 PMFFAIGMGRKHTHVAEYLLQQDSINV 326
           P+  AI   R      E L+   SIN 
Sbjct: 226 PLHNAIIHNRS---AIELLINNASIND 249

Length = 434

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 65.5 bits (160), Expect = 7e-13
 Identities = 44/187 (23%), Positives = 74/187 (39%), Gaps = 62/187 (33%)

Query: 259 ISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYL 318
             D D  + LH A   G+L++V++L++   D+NA++     P+  A   G  H  + + L
Sbjct: 2   ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNG--HLEIVKLL 59

Query: 319 LQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDM 378
           L++ +                                              ++NA   D 
Sbjct: 60  LEKGA----------------------------------------------DVNARDKDG 73

Query: 379 ITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNI 438
            TPL  AA++ +L   K L++ GA+VN               D   R+ L  A K+  ++
Sbjct: 74  NTPLHLAARNGNLDVVKLLLKHGADVNA-------------RDKDGRTPLHLAAKN-GHL 119

Query: 439 EMVKLLL 445
           E+VKLLL
Sbjct: 120 EVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 70.8 bits (174), Expect = 7e-13
 Identities = 77/322 (23%), Positives = 132/322 (40%), Gaps = 47/322 (14%)

Query: 94  LYMAILQGLYKMVTLLIHHGANVND-----RDEKGYTPLHLACYLGNKNIVKFLLSKKAD 148
           LY  I+    +++ +       + D       +K   PL+LA    N ++VK LL   AD
Sbjct: 1   LYSYIVLTKSRIIKVKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGAD 60

Query: 149 VRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKK- 207
           + +      TP+  +S     + TD  EI+ +L+E GANV         +PL +A+ KK 
Sbjct: 61  INSSTKNNSTPLHYLSNIKY-NLTDVKEIVKLLLEYGANVNAPDNNG-ITPLLYAISKKS 118

Query: 208 -NLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSV--KIVEAFLN------------- 251
            + S+VE L+   A+ N I   + E LL   +ESN +  KI++  ++             
Sbjct: 119 NSYSIVEYLLDNGANVN-IKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRVNY 177

Query: 252 --SKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGR 309
             S    ++I D    + LH A +  N + V+ L+    + N  N+Y   P+  AI    
Sbjct: 178 LLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNN 237

Query: 310 KHT------------HVAEYLLQQ-----DSINVNLPIKR---PNLLLDTVMSLKDPKVM 349
           K               + E LL       ++I     +K+      LLD         + 
Sbjct: 238 KEIFKLLLNNGPSIKTIIETLLYFKDKDLNTITKIKMLKKSIMYMFLLDPGFYKNRKLIE 297

Query: 350 SQTQIKRLDQIIKRIIDRTENI 371
           +   +K +    ++ I+R + I
Sbjct: 298 NSKSLKDVINECEKEIERMKEI 319

Length = 422

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 69.2 bits (169), Expect = 3e-12
 Identities = 79/302 (26%), Positives = 125/302 (41%), Gaps = 57/302 (18%)

Query: 355 KRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQ---- 410
             ++ I K I ++   IN   D+  TPL+ A +  D +  +  I+ GA++N   T+    
Sbjct: 12  GDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHP 71

Query: 411 -------------KAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNK 457
                        K  I +   +     S L   C  K   +M+K +L  G DVN   + 
Sbjct: 72  LLTAIKIGAHDIIKLLIDNGVDT-----SILPIPCIEK---DMIKTILDCGIDVN-IKDA 122

Query: 458 PKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLK 517
             +  L  AI+ GD + +K L  YGA ++ E+                       N    
Sbjct: 123 ELKTFLHYAIKKGDLESIKMLFEYGADVNIED----------------------DNGCYP 160

Query: 518 LNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADV 577
           +++     ++ N +D +K  +E GA  NV      S L   A  G    + LL+D+G  +
Sbjct: 161 IHI----AIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHI 216

Query: 578 NFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHA-EAGKNRDIID 636
             K   GFT LH A   + +     +LL + A  + +D   G TPL HA     + DIID
Sbjct: 217 MNKCKNGFTPLHNAIIHNRS---AIELLINNASINDQD-IDGSTPLHHAINPPCDIDIID 272

Query: 637 LL 638
           +L
Sbjct: 273 IL 274

Length = 434

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 67.4 bits (165), Expect = 8e-12
 Identities = 70/313 (22%), Positives = 127/313 (40%), Gaps = 50/313 (15%)

Query: 234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVG-----NLQIVQMLVKRKF 288
           L+ A E+ ++ +V+  L+    D++ S  + ++ LH   ++        +IV++L++   
Sbjct: 39  LYLAKEARNIDVVKILLD-NGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGA 97

Query: 289 DINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKV 348
           ++NA +   + P+ +AI        + EYLL     NVN+       LL   +      +
Sbjct: 98  NVNAPDNNGITPLLYAISKKSNSYSIVEYLLDN-GANVNIKNSDGENLLHLYLESNKIDL 156

Query: 349 MSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTE 408
                     +I+K +ID+  +INA+                     YL+  G  +N+  
Sbjct: 157 ----------KILKLLIDKGVDINAK-----------------NRVNYLLSYGVPINIK- 188

Query: 409 TQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQ 468
                       D    + L YA  + NN E VK LL  GA+ N  +      PL +AI 
Sbjct: 189 ------------DVYGFTPLHYAVYN-NNPEFVKYLLDLGANPNLVNKYGD-TPLHIAIL 234

Query: 469 SGDFQIVKELQNYGAQIDK-ENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVR 527
           + + +I K L N G  I      L   +   +   T     +K I  +  L+  F KN +
Sbjct: 235 NNNKEIFKLLLNNGPSIKTIIETLLYFKDKDLNTITKIKMLKKSIMYMFLLDPGFYKNRK 294

Query: 528 SNKYDEVKKNIED 540
             +  +  K++ +
Sbjct: 295 LIENSKSLKDVIN 307

Length = 422

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 61.1 bits (149), Expect = 1e-11
 Identities = 38/84 (45%), Positives = 46/84 (54%), Gaps = 4/84 (4%)

Query: 555 LIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMK 614
           L   A  G  E+V LLL+ GADVN       TALH+A R + N  IV+ LL HGA  + K
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAAR-NGNLEIVKLLLEHGADVNAK 57

Query: 615 DGKTGKTPLKHAEAGKNRDIIDLL 638
           D K G T L  A    N +I+ LL
Sbjct: 58  D-KDGNTALHLAARNGNLEIVKLL 80

Length = 91

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 67.6 bits (165), Expect = 1e-11
 Identities = 70/279 (25%), Positives = 115/279 (41%), Gaps = 38/279 (13%)

Query: 360 IIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARS 419
           ++K ++ R  N+N      +TPL    K  +    K +I+     ++  T  A I DA +
Sbjct: 52  VVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVA-IKDAFN 110

Query: 420 SD--FCFRSALQYACKHKNNI----------------EMVKLLLLHGADVNDTSNKPKQK 461
           +     F+  L    K+   I                E+ KLLL +GAD+N         
Sbjct: 111 NRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNT 170

Query: 462 PLAVAIQSGDFQIVKELQNYGAQI---DKENYLKNKEAAR-----IAHSTTELEERKKIN 513
            L  A ++ D ++ + L +YGA +   DK N      A +     I H   E        
Sbjct: 171 ALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDAR 230

Query: 514 DL-----LKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVD 568
           D      L +++ + K+     YD +K  +E G  VN  S   G   ++ + K  E  + 
Sbjct: 231 DKCGNTPLHISVGYCKD-----YDILKLLLEHGVDVNAKSYILGLTALHSSIKS-ERKLK 284

Query: 569 LLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHH 607
           LLL+ GAD+N  ++   T L  A + +   NI R L+ +
Sbjct: 285 LLLEYGADINSLNSYKLTPLSSAVKQYLCINIGRILISN 323

Length = 477

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 67.2 bits (164), Expect = 1e-11
 Identities = 62/254 (24%), Positives = 107/254 (42%), Gaps = 41/254 (16%)

Query: 105 MVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVT------ 158
           +V  L+  G NVN  D +  TPLH+ C   NK  +K ++        KCS+  T      
Sbjct: 52  VVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSIN----KCSVFYTLVAIKD 107

Query: 159 ------------------------PILAVSANMSEDSTDTNEIISMLIENGANVREKMPF 194
                                    ++ +     +D  +  EI  +L+  GA++  K   
Sbjct: 108 AFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEA-EITKLLLSYGADINMKDRH 166

Query: 195 TDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFL-NSK 253
              + LH+A   K+  + ELL+   A+ N+  K N  P L  A++  +  IV   L N  
Sbjct: 167 KGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSP-LHHAVKHYNKPIVHILLENGA 225

Query: 254 NFDVSISDGDLNSLLHKAC-HVGNLQIVQMLVKRKFDINAQNRYF-LPPMFFAIGMGRKH 311
           + D     G  N+ LH +  +  +  I+++L++   D+NA++    L  +  +I   RK 
Sbjct: 226 STDARDKCG--NTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSSIKSERKL 283

Query: 312 THVAEYLLQQDSIN 325
             + EY    +S+N
Sbjct: 284 KLLLEYGADINSLN 297

Length = 477

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 65.4 bits (159), Expect = 4e-11
 Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 6/172 (3%)

Query: 60  LCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDR 119
           L  AV +  ++ VE LL  G    +   +DG T L++A +     ++ LLI  GA+ +  
Sbjct: 72  LHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIP 131

Query: 120 DEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIIS 179
           +   ++PLHLA  +G+   ++ L+  KA +  +     TP++     M++       I  
Sbjct: 132 NTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIA---MAKGDI---AICK 185

Query: 180 MLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQE 231
           ML+++GAN+         + L +A+    + +V L IK  AD N++  +  E
Sbjct: 186 MLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMFMIEGE 237

Length = 413

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 58.8 bits (143), Expect = 6e-11
 Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 6/95 (6%)

Query: 234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQ 293
           L  A ++ ++++V+  L        ++ GD ++ LH A   GNL+IV++L++   D+NA+
Sbjct: 1   LHLAAKNGNLELVKLLLEK---GADVNLGDTDTALHLAARNGNLEIVKLLLEHGADVNAK 57

Query: 294 NRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNL 328
           ++     +  A   G  +  + + LL+    ++NL
Sbjct: 58  DKDGNTALHLAARNG--NLEIVKLLLEHG-ADINL 89

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 57.7 bits (140), Expect = 2e-10
 Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 16/96 (16%)

Query: 359 QIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDAR 418
           +++K ++++  ++N    D  T L  AA++ +L+  K L++ GA+VN             
Sbjct: 11  ELVKLLLEKGADVNL--GDTDTALHLAARNGNLEIVKLLLEHGADVN------------- 55

Query: 419 SSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDT 454
           + D    +AL  A ++  N+E+VKLLL HGAD+N  
Sbjct: 56  AKDKDGNTALHLAARN-GNLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 63.1 bits (153), Expect = 2e-10
 Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 17/201 (8%)

Query: 432 CKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYL 491
           C +  +IE ++ ++ +  +  + S      PL  AI+SGD +IV+    +GA I+  N  
Sbjct: 8   CIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHIN-- 65

Query: 492 KNKEAARIAHS-TTELEERKKINDLLKLNLD-----FLKNVRSNKYDEVKKNIEDGACVN 545
                 +I H   T ++     +D++KL +D      +  +   + D +K  ++ G  VN
Sbjct: 66  -----TKIPHPLLTAIKIGA--HDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVN 118

Query: 546 VSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLL 605
           +      + L Y   KG  E + +L + GADVN +   G   +H+A + +  D I++ LL
Sbjct: 119 IKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFD-IIKLLL 177

Query: 606 HHGAYYDMKDGKTGKTPLKHA 626
             GAY ++KD   G++PL +A
Sbjct: 178 EKGAYANVKD-NNGESPLHNA 197

Length = 434

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 56.1 bits (136), Expect = 2e-10
 Identities = 23/54 (42%), Positives = 33/54 (61%)

Query: 90  GRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLL 143
           GRTAL+ A + G  ++V  L+  G ++N  DE G T LH+A   GN  ++K LL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 62.7 bits (153), Expect = 3e-10
 Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 4/107 (3%)

Query: 520 LDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIY---VAWKGYEEIVDLLLDNGAD 576
            D+L N  +   +EV++ +  GA VN   E   + L      + +  ++IV LLL+ GAD
Sbjct: 16  YDYLLNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGAD 75

Query: 577 VNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPL 623
           VN     GFT LH+     +  ++++ L+  GA  + KD K G+TPL
Sbjct: 76  VNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKD-KVGRTPL 121

Length = 471

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 62.7 bits (152), Expect = 3e-10
 Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 15/224 (6%)

Query: 31  IMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDG 90
           I+F E D     L   IN +      ++ +  A+       ++ L+  G    + K  D 
Sbjct: 10  ILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIP-DVKYPDI 68

Query: 91  RTALYMAILQGLYKMVTLLIHHGANVNDR-DEKGYTPLHLACYLGNKNIVKFLLSKKADV 149
            + L+ A+ +G  K V  L+  G   +D   + G TPLHLA  L   +I+K L+++ AD 
Sbjct: 69  ESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADP 128

Query: 150 RAKCSMMVTPI-LAVSANMSEDSTDTNEIISMLIENGA--NVREKMPFTDFSPLHFAVVK 206
               +   +P+ LAV   M  D     + I +LI++ A  ++ +    T   PL  A+ K
Sbjct: 129 DIPNTDKFSPLHLAV---MMGDI----KGIELLIDHKACLDIEDCCGCT---PLIIAMAK 178

Query: 207 KNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFL 250
            ++++ ++L+   A+ +   K      L +AIE+N + IV  F+
Sbjct: 179 GDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFI 222

Length = 413

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 57.8 bits (140), Expect = 4e-10
 Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 28/147 (19%)

Query: 425 RSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQ 484
           R+ L  A  +  ++E+VKLLL +GADVN   +   + PL +A ++G  +IVK L   GA 
Sbjct: 8   RTPLHLAASN-GHLEVVKLLLENGADVNAK-DNDGRTPLHLAAKNGHLEIVKLLLEKGAD 65

Query: 485 IDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACV 544
           ++  +   N          T L                    R+   D VK  ++ GA V
Sbjct: 66  VNARDKDGN----------TPL----------------HLAARNGNLDVVKLLLKHGADV 99

Query: 545 NVSSERRGSALIYVAWKGYEEIVDLLL 571
           N   +   + L   A  G+ E+V LLL
Sbjct: 100 NARDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 60.7 bits (147), Expect = 1e-09
 Identities = 55/180 (30%), Positives = 87/180 (48%), Gaps = 10/180 (5%)

Query: 82  DVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKF 141
           DVN K  + +T L+ AI +G  + + +L  +GA+VN  D+ G  P+H+A      +I+K 
Sbjct: 116 DVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKL 175

Query: 142 LLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLH 201
           LL K A    K +   +P L  +A   + +      I +LI++G ++  K     F+PLH
Sbjct: 176 LLEKGAYANVKDNNGESP-LHNAAEYGDYAC-----IKLLIDHGNHIMNKCK-NGFTPLH 228

Query: 202 FAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISD 261
            A++  N S +ELLI   A  N    ++    L  AI       +   L     D+SI D
Sbjct: 229 NAII-HNRSAIELLIN-NASIN-DQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKD 285

Length = 434

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 59.6 bits (144), Expect = 3e-09
 Identities = 91/404 (22%), Positives = 163/404 (40%), Gaps = 71/404 (17%)

Query: 238 IESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYF 297
           I S  ++ +E  + +K   ++IS  +  + L  A   G+ +IV++ +K   DIN  N   
Sbjct: 9   IYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKI 68

Query: 298 LPPMFFAIGMGRKHTHVAEYLLQQDSINVN-LPIKRPNLLLDTVMSLKDPKVMSQTQIKR 356
             P+  AI +G    H    LL  + ++ + LPI  P +  D                  
Sbjct: 69  PHPLLTAIKIG---AHDIIKLLIDNGVDTSILPI--PCIEKDM----------------- 106

Query: 357 LDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISD 416
               IK I+D   ++N +  ++ T L +A K  DL+S K L + GA+VN+ +    +   
Sbjct: 107 ----IKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCY--- 159

Query: 417 ARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVK 476
                      +  A KH N  +++KLLL  GA  N   +   + PL  A + GD+  +K
Sbjct: 160 ----------PIHIAIKH-NFFDIIKLLLEKGAYAN-VKDNNGESPLHNAAEYGDYACIK 207

Query: 477 ELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKK 536
            L      ID  N++ NK           +   +   +LL  N                 
Sbjct: 208 LL------IDHGNHIMNKCKNGFTPLHNAIIHNRSAIELLINN----------------- 244

Query: 537 NIEDGACVNVSSERRGSALIY-VAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFH 595
                A +N       + L + +      +I+D+LL + AD++ K   G   +  A ++ 
Sbjct: 245 -----ASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKDNKGENPIDTAFKYI 299

Query: 596 SNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLH 639
           + D +++ ++ +       D       L+H E   N++  D + 
Sbjct: 300 NKDPVIKDIIANAVLIKEADKLKDSDFLEHIEIKDNKEFSDFIK 343

Length = 434

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 58.9 bits (142), Expect = 7e-09
 Identities = 74/259 (28%), Positives = 114/259 (44%), Gaps = 31/259 (11%)

Query: 390 DLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGA 449
           +L  A+ L++ GA+VN             + D    + + YA +   N +MV LLL +GA
Sbjct: 157 ELLIAEMLLEGGADVN-------------AKDIYCITPIHYAAER-GNAKMVNLLLSYGA 202

Query: 450 DVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEER 509
           DVN  +       L  A+ S +   +K + +     ++ N  KN  +   A    +LE  
Sbjct: 203 DVNIIA-LDDLSVLECAVDSKNIDTIKAIID-----NRSNINKNDLSLLKAIRNEDLETS 256

Query: 510 KKINDL-LKLN-LDFLKNVRSNKYDE-------VKKNIEDGACVNVSSERRGSALIYVAW 560
             + D    +N +D  KN   +   +       V K +E GA VN  + +  + L  +A 
Sbjct: 257 LLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAK 316

Query: 561 KGYE-EIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTG 619
            GY+ E +  L+  GADVN       T LH A     N +IV  LL  GA  + +D    
Sbjct: 317 NGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARD-YCD 375

Query: 620 KTPLKHAEAGKNRDIIDLL 638
           KTP+ +A    N  II+ L
Sbjct: 376 KTPIHYAAVRNNVVIINTL 394

Length = 682

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 58.1 bits (140), Expect = 7e-09
 Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 17/181 (9%)

Query: 47  INSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMV 106
           +N   A+    T L  A+    +  ++ L   G  DVN +  +G   +++AI    + ++
Sbjct: 117 VNIKDAELK--TFLHYAIKKGDLESIKMLFEYG-ADVNIEDDNGCYPIHIAIKHNFFDII 173

Query: 107 TLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPI-LAVSA 165
            LL+  GA  N +D  G +PLH A   G+   +K L+     +  KC    TP+  A+  
Sbjct: 174 KLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIH 233

Query: 166 NMSEDSTDTNEIISMLIENGA-NVREKMPFTDFSPLHFAVVKK-NLSVVELLIKCKADTN 223
           N S         I +LI N + N ++       +PLH A+    ++ ++++L+  KAD +
Sbjct: 234 NRS--------AIELLINNASINDQD---IDGSTPLHHAINPPCDIDIIDILLYHKADIS 282

Query: 224 L 224
           +
Sbjct: 283 I 283

Length = 434

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 52.6 bits (127), Expect = 1e-08
 Identities = 36/135 (26%), Positives = 49/135 (36%), Gaps = 44/135 (32%)

Query: 127 LHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGA 186
           LHLA   GN  +VK LL K ADV                      TDT            
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLG------------------DTDT------------ 30

Query: 187 NVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIV 246
                        LH A    NL +V+LL++  AD N   K      L  A  + +++IV
Sbjct: 31  ------------ALHLAARNGNLEIVKLLLEHGADVNAKDKDGNTA-LHLAARNGNLEIV 77

Query: 247 EAFLNSKNFDVSISD 261
           +  L     D+++ D
Sbjct: 78  KLLL-EHGADINLKD 91

Length = 91

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 56.0 bits (134), Expect = 1e-08
 Identities = 43/156 (27%), Positives = 64/156 (41%), Gaps = 7/156 (4%)

Query: 489 NYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSS 548
           N                L+     +  L L L+      ++  + + K I D   +    
Sbjct: 12  NKCFLDLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIVDR-HLAARD 70

Query: 549 ERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDN----IVRKL 604
                 L   A KG ++IV LLL +GADVN K A G T LH+A    +       + + L
Sbjct: 71  LDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLL 130

Query: 605 LHHGAYYDMKD--GKTGKTPLKHAEAGKNRDIIDLL 638
           L  GA  D+ +   + G TPL  A    + DI++LL
Sbjct: 131 LEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELL 166

Length = 235

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 50.7 bits (122), Expect = 4e-08
 Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           T L  A  +  +  V+ LL  G  DVN K +DG TAL++A   G  ++V LL+ HGA++N
Sbjct: 30  TALHLAARNGNLEIVKLLLEHG-ADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGADIN 88

Query: 118 DRD 120
            +D
Sbjct: 89  LKD 91

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 50.7 bits (122), Expect = 5e-08
 Identities = 28/140 (20%), Positives = 54/140 (38%), Gaps = 50/140 (35%)

Query: 268 LHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVN 327
           LH A   GNL++V++L+++  D+N  +      +  A   G  +  + + LL+  +    
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTDT--ALHLAARNG--NLEIVKLLLEHGA---- 52

Query: 328 LPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAK 387
                                                     ++NA+  D  T L  AA+
Sbjct: 53  ------------------------------------------DVNAKDKDGNTALHLAAR 70

Query: 388 HCDLQSAKYLIQKGANVNLT 407
           + +L+  K L++ GA++NL 
Sbjct: 71  NGNLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 55.4 bits (134), Expect = 5e-08
 Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 25/140 (17%)

Query: 67  NKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLY--KMVTLLIHHGANVN------- 117
           N    VE+LL  G  +VN K  DG   L++ +       K++ LLI  G ++N       
Sbjct: 119 NSYSIVEYLLDNGA-NVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRVNY 177

Query: 118 ---------DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMS 168
                     +D  G+TPLH A Y  N   VK+LL   A+         TP+     N +
Sbjct: 178 LLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNN 237

Query: 169 EDSTDTNEIISMLIENGANV 188
           +      EI  +L+ NG ++
Sbjct: 238 K------EIFKLLLNNGPSI 251

Length = 422

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 55.4 bits (134), Expect = 6e-08
 Identities = 62/326 (19%), Positives = 117/326 (35%), Gaps = 61/326 (18%)

Query: 360 IIKRIIDRTENINAEGDDMITPL---LFAAKHCDLQSAKYLIQKGANVNLTETQKAFISD 416
            ++R++    ++N  G+   TPL   L  +        + L++ GA+VN  E        
Sbjct: 29  EVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPER------- 81

Query: 417 ARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTS---NKPKQKPLAVAIQSGDFQ 473
                 C  + L     +   ++++KLL+  GADVN        P    L+    + + +
Sbjct: 82  ------CGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSG--FNINPK 133

Query: 474 IVKELQNYGAQI-DKENYLKNKEAARIAHSTTELEERKKIN-DLLKLNLD---------- 521
           +++ L   GA +   + Y     A  +        + +  N +LL+L +D          
Sbjct: 134 VIRLLLRKGADVNALDLYGMTPLAVLL--------KSRNANVELLRLLIDAGADVYAVDD 185

Query: 522 --------FLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEE--IVDLLL 571
                    L++ +      V++ I  G     +     + L  +A     +  +V  LL
Sbjct: 186 RFRSLLHHHLQSFKPRA-RIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLL 244

Query: 572 DNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKN 631
             G  +N ++  G T LH A  F +N    R+L+  GA  +      G TPL       N
Sbjct: 245 IAGISINARNRYGQTPLHYAAVF-NNPRACRRLIALGADINAVS-SDGNTPLSLMVRNNN 302

Query: 632 RDIIDL-------LHLIDNLFASVTN 650
              +            +     + + 
Sbjct: 303 GRAVRAALAKNPSAETVAATLNTASV 328

Length = 471

>gnl|CDD|165256 PHA02946, PHA02946, ankyin-like protein; Provisional

 Score = 55.4 bits (133), Expect = 6e-08
 Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 8/204 (3%)

Query: 104 KMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAV 163
           + V  L+H G + N+ D+ G  PLH+A  + N  IV  LL+  AD  A      TP+  +
Sbjct: 53  RFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYL 112

Query: 164 SANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTN 223
           S    E      E I++L++ GA +   +      PL  A    +  V + ++    +  
Sbjct: 113 SGTDDE----VIERINLLVQYGAKINNSVDEEGCGPL-LACTDPSERVFKKIMSIGFEAR 167

Query: 224 LIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACH--VGNLQIVQ 281
           ++ K  +  +    +  N      +++       S  D D N+ LH  C   V N+ I+ 
Sbjct: 168 IVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIIN 227

Query: 282 MLVKRKFDINAQNRYFLPPMFFAI 305
           +L+    D+N QN++   P+   I
Sbjct: 228 LLLPST-DVNKQNKFGDSPLTLLI 250

Length = 446

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 49.9 bits (120), Expect = 8e-08
 Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 4/66 (6%)

Query: 428 LQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDK 487
           L  A K+  N+E+VKLLL  GADVN          L +A ++G+ +IVK L  +GA ++ 
Sbjct: 1   LHLAAKN-GNLELVKLLLEKGADVNLGDTDT---ALHLAARNGNLEIVKLLLEHGADVNA 56

Query: 488 ENYLKN 493
           ++   N
Sbjct: 57  KDKDGN 62

Length = 91

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 54.3 bits (131), Expect = 1e-07
 Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 1/88 (1%)

Query: 67  NKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTP 126
           N    V +LLS G   +N K   G T L+ A+     + V  L+  GAN N  ++ G TP
Sbjct: 170 NAKNRVNYLLSYG-VPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTP 228

Query: 127 LHLACYLGNKNIVKFLLSKKADVRAKCS 154
           LH+A    NK I K LL+    ++    
Sbjct: 229 LHIAILNNNKEIFKLLLNNGPSIKTIIE 256

Length = 422

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 48.1 bits (115), Expect = 2e-07
 Identities = 19/53 (35%), Positives = 28/53 (52%)

Query: 108 LLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPI 160
           LL H   ++N  D  G TPLHLA   G   +V++LL    D+  + S  +T +
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTAL 53

Length = 56

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 47.7 bits (114), Expect = 2e-07
 Identities = 21/56 (37%), Positives = 30/56 (53%)

Query: 75  LLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLA 130
           LL  G  D+N    +G T L++A   G  ++V  L+  G ++N RD  G T L LA
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 53.1 bits (128), Expect = 3e-07
 Identities = 52/242 (21%), Positives = 95/242 (39%), Gaps = 52/242 (21%)

Query: 360 IIKRIIDRTENINAEGDDMITPLLFAAKH-----CDLQSAKYLIQKGANVNLTETQKAFI 414
           ++K ++D   +IN+   +  TPL + +          +  K L++ GANVN         
Sbjct: 50  VVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAP------- 102

Query: 415 SDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSG--DF 472
                 +      L    K  N+  +V+ LL +GA+VN  ++  +   L + ++S   D 
Sbjct: 103 -----DNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGEN-LLHLYLESNKIDL 156

Query: 473 QIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLD----------- 521
           +I+K L + G  I+ +N                     ++N LL   +            
Sbjct: 157 KILKLLIDKGVDINAKN---------------------RVNYLLSYGVPINIKDVYGFTP 195

Query: 522 FLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKS 581
               V +N  + VK  ++ GA  N+ ++   + L        +EI  LLL+NG  +    
Sbjct: 196 LHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKTII 255

Query: 582 AT 583
            T
Sbjct: 256 ET 257

Length = 422

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 265 NSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLL 319
            + LHKA   G L++V+ L+++  DIN  +      +  A   G  +  V + LL
Sbjct: 2   RTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENG--NLEVLKLLL 54

Length = 54

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 52.6 bits (126), Expect = 4e-07
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 18/213 (8%)

Query: 437 NIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEA 496
           N+++VK LL  G +VN   ++    PL +  +  +   +KE+      I+K +      A
Sbjct: 49  NLDVVKSLLTRGHNVNQPDHR-DLTPLHIICKEPNKLGMKEMI---RSINKCSVFYTLVA 104

Query: 497 ARIAHSTTELEERKKI-NDLLKLNLDF-LKNVRSNKYDE------VKKNIEDGACVNVSS 548
            + A +   +E  K I  +  K      L  +     D+       K  +  GA +N+  
Sbjct: 105 IKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKD 164

Query: 549 ERRG-SALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHH 607
             +G +AL Y      + + +LLL  GA+VN    T  + LH A + H N  IV  LL +
Sbjct: 165 RHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVK-HYNKPIVHILLEN 223

Query: 608 GAYYDMKDGKTGKTPLKHAEAG--KNRDIIDLL 638
           GA  D +D K G TPL H   G  K+ DI+ LL
Sbjct: 224 GASTDARD-KCGNTPL-HISVGYCKDYDILKLL 254

Length = 477

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 51.4 bits (122), Expect = 4e-07
 Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 15/142 (10%)

Query: 84  NEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKN-----I 138
             +  DGR  L+ A  +G  K+V LL+  GA+VN +D  G TPLHLA   GN       +
Sbjct: 67  AARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEV 126

Query: 139 VKFLLSKKADVRAKC---SMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFT 195
            K LL   AD+           TP+   + N         +I+ +L+E GA+   +  + 
Sbjct: 127 AKLLLEAGADLDVNNLRDEDGNTPLHWAALN------GDADIVELLLEAGADPNSRNSY- 179

Query: 196 DFSPLHFAVVKKNLSVVELLIK 217
             + L  A     + +V+LL+ 
Sbjct: 180 GVTALDPAAKNGRIELVKLLLD 201

Length = 235

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 51.0 bits (121), Expect = 6e-07
 Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 2/77 (2%)

Query: 72  VEFLLSTGDH--DVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHL 129
            + LL  G      N + +DG T L+ A L G   +V LL+  GA+ N R+  G T L  
Sbjct: 127 AKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDP 186

Query: 130 ACYLGNKNIVKFLLSKK 146
           A   G   +VK LL K 
Sbjct: 187 AAKNGRIELVKLLLDKG 203

Length = 235

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 45.6 bits (109), Expect = 6e-07
 Identities = 16/31 (51%), Positives = 19/31 (61%)

Query: 122 KGYTPLHLACYLGNKNIVKFLLSKKADVRAK 152
            G TPLHLA   G+  +VK LL   ADV A+
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNAR 31

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 50.4 bits (120), Expect = 2e-06
 Identities = 48/249 (19%), Positives = 94/249 (37%), Gaps = 48/249 (19%)

Query: 91  RTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVR 150
           + AL  AIL G   +   L+  G N N     G +P+ LA    +   +K L+   A   
Sbjct: 3   QVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPD 62

Query: 151 AKCSMMVTPILAVSANMSEDSTDTNEI--ISMLIENGANVREKMPFTDFSPLHFAVVKKN 208
            K   + + +         D+ +  ++  +  L++ G    +       +PLH A + K 
Sbjct: 63  VKYPDIESEL--------HDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKK 114

Query: 209 LSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLL 268
           L +++LLI   AD +                                   I + D  S L
Sbjct: 115 LDIMKLLIARGADPD-----------------------------------IPNTDKFSPL 139

Query: 269 HKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNL 328
           H A  +G+++ +++L+  K  ++ ++     P+  A  M +    + + LL   + N++ 
Sbjct: 140 HLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIA--MAKGDIAICKMLLDSGA-NIDY 196

Query: 329 PIKRPNLLL 337
             K   +  
Sbjct: 197 FGKNGCVAA 205

Length = 413

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 50.0 bits (119), Expect = 3e-06
 Identities = 65/287 (22%), Positives = 112/287 (39%), Gaps = 69/287 (24%)

Query: 170 DSTDTNE--IISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVK 227
           D+    E  I   L++ G N   ++ +   SP+  A+  ++   ++LL+K  A  ++   
Sbjct: 8   DAILFGELDIARRLLDIGINPNFEI-YDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYP 66

Query: 228 VNQEPLLFFAIESNSVKIVEAFLNSKNF--DVSISDGDLNSLLHKACHVGNLQIVQMLVK 285
             +  L   A+E   VK VE  L+   F  DV   DG   + LH A  +  L I+++L+ 
Sbjct: 67  DIESEL-HDAVEEGDVKAVEELLDLGKFADDVFYKDG--MTPLHLATILKKLDIMKLLIA 123

Query: 286 RKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKD 345
           R  D +  N     P+  A+ MG                ++                   
Sbjct: 124 RGADPDIPNTDKFSPLHLAVMMG----------------DIKG----------------- 150

Query: 346 PKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVN 405
                          I+ +ID    ++ E     TPL+ A    D+   K L+  GAN++
Sbjct: 151 ---------------IELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANID 195

Query: 406 LTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVN 452
                       ++      +AL YA ++ N I++V+L +  GAD N
Sbjct: 196 YF---------GKNGCV---AALCYAIEN-NKIDIVRLFIKRGADCN 229

Length = 413

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 49.3 bits (118), Expect = 5e-06
 Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 3/81 (3%)

Query: 538 IEDGACVNVSSERRGSALIYVAWK--GYEEIVDLLLDNGADVNFKSATGFTALHMACRFH 595
           +E GA VN       + L+Y   K      IV+ LLDNGA+VN K++ G   LH+    +
Sbjct: 93  LEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESN 152

Query: 596 SND-NIVRKLLHHGAYYDMKD 615
             D  I++ L+  G   + K+
Sbjct: 153 KIDLKILKLLIDKGVDINAKN 173

Length = 422

>gnl|CDD|222954 PHA02989, PHA02989, ankyrin repeat protein; Provisional

 Score = 49.0 bits (117), Expect = 6e-06
 Identities = 82/352 (23%), Positives = 154/352 (43%), Gaps = 69/352 (19%)

Query: 104 KMVTLLIHHGANVNDRDEKGYTPLHLACYLGNK----NIVKFLLSKKADVRAKCSMMVTP 159
             +  L+  G +VN+ + +G + L L  YL  K     IVK L+   ADV  K   + TP
Sbjct: 17  NALEFLLRTGFDVNE-EYRGNSILLL--YLKRKDVKIKIVKLLIDNGADVNYK-GYIETP 72

Query: 160 ILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCK 219
           + AV  N    S    +I+ +L++ GA++  K  F   SP+   +   N++  ++L    
Sbjct: 73  LCAVLRNREITSNKIKKIVKLLLKFGADINLK-TFNGVSPIVCFIYNSNINNCDML---- 127

Query: 220 ADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLH---KACHVGN 276
                        LL   I  N VK      NS+ ++          LLH   ++  V  
Sbjct: 128 -----------RFLLSKGINVNDVK------NSRGYN----------LLHMYLESFSV-K 159

Query: 277 LQIVQMLVKRKFDINAQNRYF-LPPM--FFAIGMGRKHTHVAEYLLQQDSINVNLPIKRP 333
             ++++L+    ++  +   + L PM  +    +      V +YL+++  +N+       
Sbjct: 160 KDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKK-GVNIETNNNGS 218

Query: 334 NLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQS 393
             +L++   L + K++S+ + K L+ I+K I  +    + +G     PLL +AK  + ++
Sbjct: 219 ESVLESF--LDNNKILSKKEFKVLNFILKYI--KINKKDKKG---FNPLLISAKVDNYEA 271

Query: 394 AKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLL 445
             YL++ G ++          + ++  D      L YA KH  NI+M+  +L
Sbjct: 272 FNYLLKLGDDIY---------NVSKDGDTV----LTYAIKH-GNIDMLNRIL 309

Length = 494

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 48.7 bits (116), Expect = 7e-06
 Identities = 57/263 (21%), Positives = 108/263 (41%), Gaps = 41/263 (15%)

Query: 268 LHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFA------IGMG-------RKHTHV 314
           LH+A    NL +V+ L+ R  ++N  +   L P+         +GM        +     
Sbjct: 41  LHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFY 100

Query: 315 AEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLD----QIIKRIIDRTEN 370
               ++    N N+ I +  +L +   +++   ++   +  + D    +I K ++    +
Sbjct: 101 TLVAIKDAFNNRNVEIFK-IILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGAD 159

Query: 371 INAEGDDMI-TPLLFAAKHCDLQSAKYLIQKGANVNLTETQ-----------------KA 412
           IN +      T L +A ++ D +  + L+  GANVN+ +                     
Sbjct: 160 INMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHI 219

Query: 413 FISDARSSDF---CFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQS 469
            + +  S+D    C  + L  +  +  + +++KLLL HG DVN  S       L  +I+S
Sbjct: 220 LLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSSIKS 279

Query: 470 GDFQIVKELQNYGAQIDKENYLK 492
              + +K L  YGA I+  N  K
Sbjct: 280 E--RKLKLLLEYGADINSLNSYK 300

Length = 477

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 45.5 bits (108), Expect = 8e-06
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)

Query: 578 NFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDL 637
           N +   G T LH+A   + +  +V+ LL +GA  + KD   G+TPL  A    + +I+ L
Sbjct: 1   NARDEDGRTPLHLAAS-NGHLEVVKLLLENGADVNAKD-NDGRTPLHLAAKNGHLEIVKL 58

Query: 638 L 638
           L
Sbjct: 59  L 59

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 48.4 bits (115), Expect = 8e-06
 Identities = 62/250 (24%), Positives = 99/250 (39%), Gaps = 40/250 (16%)

Query: 360 IIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARS 419
           I +R++D   N N E  D I+P+  A K  D ++ K L++ GA           I D + 
Sbjct: 17  IARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGA-----------IPDVKY 65

Query: 420 SDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQ 479
            D    S L  A + + +++ V+ LL  G   +D   K    PL +A       I+K L 
Sbjct: 66  PD--IESELHDAVE-EGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLI 122

Query: 480 NYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIE 539
             GA  D    + N +     H    + + K I  L+                +   +IE
Sbjct: 123 ARGADPD----IPNTDKFSPLHLAVMMGDIKGIELLID--------------HKACLDIE 164

Query: 540 DGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDN 599
           D            + LI    KG   I  +LLD+GA++++    G  A       ++  +
Sbjct: 165 DCCGC--------TPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKID 216

Query: 600 IVRKLLHHGA 609
           IVR  +  GA
Sbjct: 217 IVRLFIKRGA 226

Length = 413

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 43.4 bits (103), Expect = 8e-06
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 14/66 (21%)

Query: 380 TPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIE 439
           T L  AA    L+  KYL++KG ++N T             D    +AL  A ++  N+E
Sbjct: 3   TALHKAAISGRLELVKYLLEKGVDINRT-------------DEDGNTALHIAAEN-GNLE 48

Query: 440 MVKLLL 445
           ++KLLL
Sbjct: 49  VLKLLL 54

Length = 54

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 15/33 (45%), Positives = 22/33 (66%)

Query: 89  DGRTALYMAILQGLYKMVTLLIHHGANVNDRDE 121
           DG T L++A   G  ++V LL+  GA+VN RD+
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 47.6 bits (113), Expect = 2e-05
 Identities = 26/70 (37%), Positives = 39/70 (55%)

Query: 75  LLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLG 134
           +L TG  D N +  DGRT L++A   G  ++V +L+  GA+    D+ G TPL LA   G
Sbjct: 100 ILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENG 159

Query: 135 NKNIVKFLLS 144
            + +V+ L  
Sbjct: 160 FREVVQLLSR 169

Length = 664

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 46.8 bits (111), Expect = 3e-05
 Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 2/72 (2%)

Query: 567 VDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHA 626
             +LL  GAD N +   G T LH+AC  + +  +VR LL  GA   + D K GKTPL+ A
Sbjct: 98  ARILLTGGADPNCRDYDGRTPLHIAC-ANGHVQVVRVLLEFGADPTLLD-KDGKTPLELA 155

Query: 627 EAGKNRDIIDLL 638
           E    R+++ LL
Sbjct: 156 EENGFREVVQLL 167

Length = 664

>gnl|CDD|222931 PHA02798, PHA02798, ankyrin-like protein; Provisional

 Score = 47.1 bits (112), Expect = 3e-05
 Identities = 50/233 (21%), Positives = 90/233 (38%), Gaps = 47/233 (20%)

Query: 65  WDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLY---KMVTLLIHHGANVNDRDE 121
           + + +  V+ L+  G  D+N+K  DG T LY  +  G     +++  +I +GA+    D+
Sbjct: 85  YKHMLDIVKILIENG-ADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDK 143

Query: 122 KGYTPLHLACYLGNK---NIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEII 178
            G+T L +     +     I+K LL K  D+    +      L      + D  D + I+
Sbjct: 144 DGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDAD-IL 202

Query: 179 SMLIENGANVREKMPFT--------------------------------------DFSPL 200
            + ++NG  + ++                                           F+PL
Sbjct: 203 KLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPL 262

Query: 201 HFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSK 253
           +++V   N  + E L++   D N I+       LF A E+ S  I  + LN K
Sbjct: 263 YYSVSHNNRKIFEYLLQLGGDIN-IITELGNTCLFTAFENESKFIFNSILNKK 314

Length = 489

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 41.5 bits (98), Expect = 4e-05
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 553 SALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLL 605
           +AL   A  G  E+V  LL+ G D+N     G TALH+A   + N  +++ LL
Sbjct: 3   TALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAE-NGNLEVLKLLL 54

Length = 54

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 46.6 bits (111), Expect = 4e-05
 Identities = 38/152 (25%), Positives = 53/152 (34%), Gaps = 27/152 (17%)

Query: 60  LCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGAN---- 115
           L  A  +N+  E+  LL             G T L  AI       V  ++ H       
Sbjct: 56  LFVAAIENENLELTELLLNLSCRGAV----GDTLL-HAISLEYVDAVEAILLHLLAAFRK 110

Query: 116 ------VNDRD----EKGYTPLHLACYLGNKNIVKFLLSKKADV--RAKCSMMVTPILAV 163
                  ND+       G T LHLA +  N  IVK LL + A V  RA     V      
Sbjct: 111 SGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVD 170

Query: 164 SANMSED------STDTNEIISMLIENGANVR 189
           S    E          +  I+++L E+ A++ 
Sbjct: 171 SFYHGESPLNAAACLGSPSIVALLSEDPADIL 202

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 233 LLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLV 284
            L  A  S  +++V+  L     D++ +D D N+ LH A   GNL+++++L+
Sbjct: 4   ALHKAAISGRLELVKYLLEKG-VDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 2/54 (3%)

Query: 425 RSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKEL 478
           R+AL  A      +E+VK LL  G D+N T ++     L +A ++G+ +++K L
Sbjct: 2   RTALHKAAIS-GRLELVKYLLEKGVDINRT-DEDGNTALHIAAENGNLEVLKLL 53

Length = 54

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 570 LLDNG-ADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHA 626
           LL++G  D+N     G T LH+A ++ + + +V+ LL  G   +++D   G T L  A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALE-LVQWLLKPGVDLNLRD-SDGLTALDLA 56

Length = 56

>gnl|CDD|222931 PHA02798, PHA02798, ankyrin-like protein; Provisional

 Score = 44.4 bits (105), Expect = 1e-04
 Identities = 64/255 (25%), Positives = 101/255 (39%), Gaps = 43/255 (16%)

Query: 360 IIKRIIDRTENINAEGDDMITPL--LFAAKHCD-LQSAKYLIQKGANVNLTETQKAFISD 416
           I+K +I+   +IN +  D  TPL  L +  + + L+   ++I+ GA+  L          
Sbjct: 91  IVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLL--------- 141

Query: 417 ARSSDFCFRSALQYACKHKNNI--EMVKLLLLHGADVNDTSNKPKQKPLAVAIQSG---- 470
                  F   LQ   +  ++I  E++KLLL  G D+N  +NK K   L    +      
Sbjct: 142 ---DKDGFTM-LQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRI 197

Query: 471 DFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNK 530
           D  I+K   + G  I+KEN    K+                +N LL  N    K  + N 
Sbjct: 198 DADILKLFVDNGFIINKENKSHKKKFMEY------------LNSLLYDN----KRFKKNI 241

Query: 531 YDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHM 590
            D +   I+    +N   E   + L Y       +I + LL  G D+N  +  G T L  
Sbjct: 242 LDFIFSYID----INQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFT 297

Query: 591 ACRFHSNDNIVRKLL 605
           A     +  I   +L
Sbjct: 298 AFENE-SKFIFNSIL 311

Length = 489

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 425 RSALQYACKHKNNIEMVKLLLLHGADVNDTSN 456
            + L  A ++  ++E+VKLLL  GADVN    
Sbjct: 3   NTPLHLAARN-GHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|222931 PHA02798, PHA02798, ankyrin-like protein; Provisional

 Score = 44.1 bits (104), Expect = 2e-04
 Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 12/130 (9%)

Query: 104 KMVTLLIHHGANVNDRDEKGYTPL-----HLACYLGNKNIVKFLLSKKADVRAKCSMMVT 158
            +V L I+ GANVN  D +  TPL     ++  Y    +IVK L+   AD+  K S   T
Sbjct: 52  DIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGET 111

Query: 159 PILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKN---LSVVELL 215
           P+  +   +S    +  EI+  +IENGA+         F+ L   +   +   + +++LL
Sbjct: 112 PLYCL---LSNGYINNLEILLFMIENGADTTLLDKD-GFTMLQVYLQSNHHIDIEIIKLL 167

Query: 216 IKCKADTNLI 225
           ++   D N  
Sbjct: 168 LEKGVDINTH 177

Length = 489

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 16/28 (57%), Positives = 18/28 (64%)

Query: 122 KGYTPLHLACYLGNKNIVKFLLSKKADV 149
            G TPLHLA   GN  +VK LL K AD+
Sbjct: 1   DGRTPLHLAAENGNLEVVKLLLDKGADI 28

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 38.0 bits (89), Expect = 3e-04
 Identities = 16/30 (53%), Positives = 18/30 (60%)

Query: 122 KGYTPLHLACYLGNKNIVKFLLSKKADVRA 151
            G TPLHLA   GN  +VK LL   AD+ A
Sbjct: 1   DGNTPLHLAARNGNLELVKLLLEHGADINA 30

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 43.7 bits (103), Expect = 3e-04
 Identities = 44/159 (27%), Positives = 66/159 (41%), Gaps = 39/159 (24%)

Query: 73  EFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPL----- 127
           E L +  D D+ +    GRT L++A  +G    V +L+ H  NV+ RD  G T L     
Sbjct: 543 ELLKAKLDPDIGD--SKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAIS 600

Query: 128 -----------HLA------------CYLGNKN---IVKFLLSKKADVRAKCSMMVTPIL 161
                      H A            C    +N    +K LL +  +V ++     T   
Sbjct: 601 AKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGAT--- 657

Query: 162 AVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPL 200
           A+   M+ED  D   ++ +LI NGA+V +     DFSP 
Sbjct: 658 ALQVAMAEDHVD---MVRLLIMNGADVDKANTDDDFSPT 693

Length = 823

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 43.3 bits (102), Expect = 4e-04
 Identities = 19/46 (41%), Positives = 26/46 (56%)

Query: 106 VTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRA 151
             +L+  GA+ N RD  G TPLH+AC  G+  +V+ LL   AD   
Sbjct: 98  ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTL 143

Length = 664

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 38.0 bits (89), Expect = 5e-04
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 56  ELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLI 110
             T L  A    ++  V++LL  G  D+N   +DG TAL++A   G  +++ LL+
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKG-VDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|165195 PHA02859, PHA02859, ankyrin repeat protein; Provisional

 Score = 41.7 bits (98), Expect = 6e-04
 Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 6/130 (4%)

Query: 176 EIISMLIENGANVREKMPFTDFSPLH-FAVVKKNLS--VVELLIKCKADTNLIVKVNQEP 232
           EI+  LIENGA+V  K    + S LH +    KN+   ++++LI   +      +  +  
Sbjct: 67  EILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNL 126

Query: 233 LLFFAIESN-SVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQ-IVQMLVKRKFDI 290
           L  +    N  + +++  ++S    ++  D D N++L+      + + I   L     DI
Sbjct: 127 LHMYMCNFNVRINVIKLLIDSGVSFLNK-DFDNNNILYSYILFHSDKKIFDFLTSLGIDI 185

Query: 291 NAQNRYFLPP 300
           N  N+     
Sbjct: 186 NETNKSGYNC 195

Length = 209

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 42.5 bits (100), Expect = 8e-04
 Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 6/100 (6%)

Query: 553 SALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYD 612
           S L+ VA  G   +++ LL    D +   + G T LH+A      ++ V  LL H     
Sbjct: 527 SNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAAS-KGYEDCVLVLLKHACNVH 585

Query: 613 MKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPY 652
           ++D   G T L +A + K+  I  +L+     FAS+++P+
Sbjct: 586 IRDAN-GNTALWNAISAKHHKIFRILY----HFASISDPH 620

Length = 823

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 40.6 bits (94), Expect = 0.001
 Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 4/85 (4%)

Query: 531 YDEVKKNIEDGAC---VNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTA 587
            +  K  +E GA     N+  E   + L + A  G  +IV+LLL+ GAD N +++ G TA
Sbjct: 124 IEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTA 183

Query: 588 LHMACRFHSNDNIVRKLLHHGAYYD 612
           L  A +      +V+ LL  G +  
Sbjct: 184 LDPAAKN-GRIELVKLLLDKGLHLS 207

Length = 235

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 36.9 bits (86), Expect = 0.001
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 256 DVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
           D++ +DG+ N+ LH A   G L++VQ L+K   D+N ++  
Sbjct: 8   DLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSD 48

Length = 56

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 36.0 bits (84), Expect = 0.002
 Identities = 12/33 (36%), Positives = 24/33 (72%)

Query: 263 DLNSLLHKACHVGNLQIVQMLVKRKFDINAQNR 295
           D N+ LH A   G+L++V++L++   D+NA+++
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 35.6 bits (83), Expect = 0.002
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 380 TPLLFAAKHCDLQSAKYLIQKGANVNLT 407
           TPL  AA++  L+  K L++ GA+VN  
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAR 31

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 35.2 bits (82), Expect = 0.003
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 553 SALIYVAWKGYEEIVDLLLDNGADVNFK 580
           + L   A  G+ E+V LLL+ GADVN +
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAR 31

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 35.2 bits (82), Expect = 0.003
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 197 FSPLHFAVVKKNLSVVELLIKCKADTNL 224
            +PLH A    +L VV+LL++  AD N 
Sbjct: 3   NTPLHLAARNGHLEVVKLLLEAGADVNA 30

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|222931 PHA02798, PHA02798, ankyrin-like protein; Provisional

 Score = 40.6 bits (95), Expect = 0.003
 Identities = 62/280 (22%), Positives = 112/280 (40%), Gaps = 43/280 (15%)

Query: 176 EIISMLIENGANVREKMPFTDFS-PL-----HFAVVKKNLSVVELLIKCKADTNLIVKVN 229
           +I+ + I  GANV       ++S PL     +    K  L +V++LI+  AD N      
Sbjct: 52  DIVKLFINLGANVNGLD--NEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDG 109

Query: 230 QEPLLFFAIESNSVKIVEAFLNSKNF---------DVSISDGD----LNSLLHKACHVGN 276
           + PL  + + SN       ++N+            D ++ D D    L   L    H+ +
Sbjct: 110 ETPL--YCLLSNG------YINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHI-D 160

Query: 277 LQIVQMLVKRKFDINAQN---RYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRP 333
           ++I+++L+++  DIN  N   +Y     +F   + R    + +  +    I         
Sbjct: 161 IEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHK 220

Query: 334 NLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQS 393
              ++ + SL           KR  + I   I    +IN   +    PL ++  H + + 
Sbjct: 221 KKFMEYLNSLLYDN-------KRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKI 273

Query: 394 AKYLIQKGANVN-LTETQKAFISDA--RSSDFCFRSALQY 430
            +YL+Q G ++N +TE     +  A    S F F S L  
Sbjct: 274 FEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNK 313

Length = 489

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 35.3 bits (82), Expect = 0.003
 Identities = 13/30 (43%), Positives = 20/30 (66%)

Query: 89  DGRTALYMAILQGLYKMVTLLIHHGANVND 118
           DGRT L++A   G  ++V LL+  GA++N 
Sbjct: 1   DGRTPLHLAAENGNLEVVKLLLDKGADINA 30

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 35.8 bits (83), Expect = 0.004
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)

Query: 538 IEDGACVNVSSERRG-SALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMA 591
           +E G     +++  G + L   A  G  E+V  LL  G D+N + + G TAL +A
Sbjct: 2   LEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 34.8 bits (81), Expect = 0.004
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 584 GFTALHMACRFHSNDNIVRKLLHHGAYYDMKD 615
           G T LH+A R + +  +V+ LL  GA  + +D
Sbjct: 2   GNTPLHLAAR-NGHLEVVKLLLEAGADVNARD 32

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	710
KOG4177|consensus	1143		100.0
KOG4177|consensus	1143		100.0
PHA02876	682	ankyrin repeat protein; Provisional	100.0
PHA02876	682	ankyrin repeat protein; Provisional	100.0
PHA02917	661	ankyrin-like protein; Provisional	100.0
PHA02917	661	ankyrin-like protein; Provisional	100.0
PHA02730	672	ankyrin-like protein; Provisional	100.0
PHA02946	446	ankyin-like protein; Provisional	100.0
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	100.0
PHA02946	446	ankyin-like protein; Provisional	100.0
PHA02730	672	ankyrin-like protein; Provisional	100.0
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	100.0
KOG0510|consensus	929		100.0
KOG0510|consensus	929		100.0
PHA02874	434	ankyrin repeat protein; Provisional	100.0
PHA02874	434	ankyrin repeat protein; Provisional	100.0
PHA03095	471	ankyrin-like protein; Provisional	100.0
PHA03095	471	ankyrin-like protein; Provisional	100.0
KOG0508|consensus	615		100.0
PHA03100	480	ankyrin repeat protein; Provisional	100.0
PHA02878	477	ankyrin repeat protein; Provisional	100.0
PHA02792	631	ankyrin-like protein; Provisional	100.0
PHA03100	480	ankyrin repeat protein; Provisional	100.0
PHA02792	631	ankyrin-like protein; Provisional	100.0
PHA02878	477	ankyrin repeat protein; Provisional	100.0
PHA02791	284	ankyrin-like protein; Provisional	100.0
PHA02989	494	ankyrin repeat protein; Provisional	100.0
KOG0508|consensus	615		100.0
PHA02989	494	ankyrin repeat protein; Provisional	100.0
PHA02791	284	ankyrin-like protein; Provisional	100.0
KOG4412|consensus	226		100.0
PHA02875	413	ankyrin repeat protein; Provisional	100.0
PHA02798	489	ankyrin-like protein; Provisional	100.0
KOG4412|consensus	226		100.0
PHA02875	413	ankyrin repeat protein; Provisional	100.0
PHA02798	489	ankyrin-like protein; Provisional	100.0
KOG4369|consensus	2131		100.0
KOG0509|consensus	600		100.0
KOG0509|consensus	600		100.0
PHA02795	437	ankyrin-like protein; Provisional	99.96
PHA02795	437	ankyrin-like protein; Provisional	99.96
PHA02859	209	ankyrin repeat protein; Provisional	99.96
PHA02859	209	ankyrin repeat protein; Provisional	99.96
KOG4369|consensus	2131		99.96
KOG0502|consensus	296		99.95
KOG0507|consensus	854		99.94
KOG0502|consensus	296		99.93
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.92
KOG0507|consensus	854		99.91
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.91
KOG0514|consensus	452		99.91
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.91
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.9
KOG0505|consensus	527		99.9
KOG0505|consensus	527		99.9
PHA02743	166	Viral ankyrin protein; Provisional	99.89
PHA02743	166	Viral ankyrin protein; Provisional	99.89
KOG0512|consensus	228		99.87
PHA02884	300	ankyrin repeat protein; Provisional	99.85
KOG0514|consensus	452		99.85
PHA02741	169	hypothetical protein; Provisional	99.85
PHA02884	300	ankyrin repeat protein; Provisional	99.85
PHA02741	169	hypothetical protein; Provisional	99.85
KOG0512|consensus	228		99.84
PHA02736	154	Viral ankyrin protein; Provisional	99.81
PHA02736	154	Viral ankyrin protein; Provisional	99.81
KOG0195|consensus	448		99.8
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.77
KOG3676|consensus	782		99.77
KOG0195|consensus	448		99.76
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.76
KOG3676|consensus	782		99.73
KOG4214|consensus	117		99.7
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.7
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.67
KOG4214|consensus	117		99.63
KOG0515|consensus	752		99.51
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.5
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.48
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.47
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.46
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.45
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.44
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.44
KOG0515|consensus	752		99.44
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.44
KOG1710|consensus	396		99.43
KOG1710|consensus	396		99.41
PF13606	30	Ank_3: Ankyrin repeat	98.82
KOG0783|consensus	1267		98.81
PF13606	30	Ank_3: Ankyrin repeat	98.8
KOG0506|consensus	622		98.8
KOG0782|consensus	1004		98.78
KOG0818|consensus	669		98.78
KOG0783|consensus	1267		98.75
KOG0782|consensus	1004		98.75
KOG0506|consensus	622		98.72
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.69
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.68
KOG0818|consensus	669		98.67
KOG0705|consensus	749		98.51
KOG0705|consensus	749		98.48
KOG0511|consensus	516		98.48
KOG0522|consensus	560		98.45
KOG0522|consensus	560		98.38
KOG2384|consensus	223		98.31
KOG0511|consensus	516		98.31
KOG0521|consensus	785		98.27
KOG3609|consensus	822		98.27
KOG3609|consensus	822		98.25
KOG2384|consensus	223		98.24
KOG0521|consensus	785		98.12
KOG0520|consensus	975		97.91
KOG0520|consensus	975		97.72
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	96.81
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	96.7
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	96.64
KOG2505|consensus	591		96.63
KOG2505|consensus	591		96.61
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	96.43
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	96.38
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	95.78
PLN03218	1060	maturation of RBCL 1; Provisional	93.58
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	93.37
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	92.51
PLN03218	1060	maturation of RBCL 1; Provisional	86.83
PLN03077	857	Protein ECB2; Provisional	81.46
PLN03077	857	Protein ECB2; Provisional	80.67

>KOG4177|consensus

Probab=100.00  E-value=1.5e-69  Score=565.74  Aligned_cols=604  Identities=27%  Similarity=0.334  Sum_probs=521.2

Q ss_pred             cccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCc
Q psy15068         23 RHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGL  102 (710)
Q Consensus        23 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~  102 (710)
                      +.-.|+.|++.|+...++.+++...+.+.....+.||+|+|+-.|+.++++.|+..++ .++....+|.||||.|++.|+
T Consensus        21 ~~~~l~~a~r~~~~~~~~~l~~~e~~~~~~sk~~~~pl~~aa~~~~~~v~~~ll~~~a-~v~~~~~~~~~plh~a~~~~~   99 (1143)
T KOG4177|consen   21 RLPALHIAARNDDTNAAKLLLQNEHNADVDSKSGFTPLHIAAHYGNENVAELLLNRGA-IVNATARNGITPLHVASKRGD   99 (1143)
T ss_pred             cchHHHHHHhccchhhcccccccccccchhcccccCHHHHHhhhhhhhhhhhhhcccc-ccCcccccCccHHHHHHhhcc
Confidence            6667999999999999999999887777777799999999999999999999999999 999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHH
Q psy15068        103 YKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLI  182 (710)
Q Consensus       103 ~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll  182 (710)
                      .++++.|+..|+.++..+..+.||||.|+..|+.+++++|+.++++++.++..|.+|++++..         ...++++.
T Consensus       100 a~~v~~ll~~ga~~~~~~~~~lTpLh~aa~~g~~~~~~~ll~~~a~~~~k~~~g~t~l~~a~~---------~~~~~ll~  170 (1143)
T KOG4177|consen  100 AEMVKLLLCRGAQIDARDRDGLTPLHCAARKGHVQVIELLLQHGAPINIKTKNGLSPLHMAAQ---------VACARLLL  170 (1143)
T ss_pred             hhHHHHHHhccCchhhcccCCCcchhhhcccccHHHHHHHHHccCCCcccccCCCCchhhhcc---------hhhhHHhh
Confidence            999999999999999999999999999999999999999999999999999999999999986         23455555


Q ss_pred             HcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCC
Q psy15068        183 ENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDG  262 (710)
Q Consensus       183 ~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~  262 (710)
                      ++..      . .-. +++.|...++.+++++++...++.+..+..+.+| +|.|+..+..++++ ++..+|+++...|.
T Consensus       171 ~~~~------~-d~l-~~~~~~~~~~~~~~~ll~~~~~~~~a~~~~~~tp-l~~a~~~nri~~~e-Lll~~gadv~a~d~  240 (1143)
T KOG4177|consen  171 EYKA------P-DYL-RLHVAAHCGHARVAKLLLDKKADPNASALNGFTP-LHIACKKNRIKVVE-LLLKHGADVSAKDE  240 (1143)
T ss_pred             hccc------c-hhh-hhhHHhhcchHHHHhhhhcccCCccccccCCCCc-hhhhccccccceee-eeeeccCcCCcccc
Confidence            5544      1 333 6688888888888888888888888888888887 88888888888888 88888888888888


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCcchhhhhhc
Q psy15068        263 DLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMS  342 (710)
Q Consensus       263 ~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~  342 (710)
                      .|.||||.|+..|+++++.+++.+|+.++..+-.+.||+|.|+..+..  ++.++|++ .+.+..........       
T Consensus       241 ~gl~~lh~a~~~g~~~i~~~l~~~ga~~~~~~vr~~tplh~AA~~~~~--e~~~~ll~-~ga~~~~~~~~~kt-------  310 (1143)
T KOG4177|consen  241 SGLTPLHVAAFMGHLDIVKLLLQHGASVNVSTVRGETPLHMAARAGQV--EVCKLLLQ-NGADVLAKARDDQT-------  310 (1143)
T ss_pred             cCccHHHHHHhccchhHHHHHHhcccccCcccccccCcchhhhccchh--hhHhhhhc-cCcccccccccccC-------
Confidence            888888888888888888888888888888888888888888888877  88888887 55555544333322       


Q ss_pred             cCCcccccHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCcc
Q psy15068        343 LKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDF  422 (710)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~  422 (710)
                           .+..+...+...+++.+++.+..++..+..+.+|+|+++..++.++..++...+.+-......            
T Consensus       311 -----~l~~a~~~g~~~i~~~~l~~~~~~~aar~~g~t~lHlaa~~~~~~~~~~l~~~~~~~~~a~~k------------  373 (1143)
T KOG4177|consen  311 -----PLHIASRLGHEEIVHLLLQAGATPNAARTAGYTPLHLAAKEGQVEVAGALLEHGAQRRQAEEK------------  373 (1143)
T ss_pred             -----hhhhhcccchHHHHHHHhhccCCccccCcCCcccccHhhhhhhHHHHHHhhccccccCccccc------------
Confidence                 222233333558888888888888888888999999999998888888888888777776666            


Q ss_pred             ccCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhh
Q psy15068        423 CFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHS  502 (710)
Q Consensus       423 ~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~  502 (710)
                       +.+|+|.|+.. +..+++++++.+|.+++.. ...|.||||.|+..++.++++.++++|++++..+  ..|.++  +|.
T Consensus       374 -~~~pl~la~~~-g~~~~v~Lll~~ga~~~~~-gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~--~lG~T~--lhv  446 (1143)
T KOG4177|consen  374 -GFTPLHLAVKS-GRVSVVELLLEAGADPNSA-GKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKA--KLGYTP--LHV  446 (1143)
T ss_pred             -CCcchhhhccc-CchhHHHhhhhccCCcccC-CCCCcceeeehhhccCcceEEEEeccCCChhhHh--hcCCCh--hhh
Confidence             88999999998 8999999999999998887 8889999999999999999999999999998888  888888  888


Q ss_pred             hhhHHHHHhhhHHHhhhHHHHHhhhcC-chHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccC
Q psy15068        503 TTELEERKKINDLLKLNLDFLKNVRSN-KYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKS  581 (710)
Q Consensus       503 a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~  581 (710)
                      +                      ...+ ..+....+++.|.++|.....|.||||.|+..|+.++++.|++.++..+...
T Consensus       447 a----------------------a~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~  504 (1143)
T KOG4177|consen  447 A----------------------AKKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDA  504 (1143)
T ss_pred             h----------------------hhcccHhhhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccc
Confidence            8                      6666 7888888888999999999999999999999999999999999988888888


Q ss_pred             CCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHH
Q psy15068        582 ATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIE  661 (710)
Q Consensus       582 ~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~  661 (710)
                      ..|.+++|.|... +...+++.++++|++++.++ ..|.||||.|+..|+.++|++|+++|+|++.++..|+||| |.||
T Consensus       505 ~~~l~~lhla~~~-~~v~~~~~l~~~ga~v~~~~-~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPL-H~Aa  581 (1143)
T KOG4177|consen  505 KKGLTPLHLAADE-DTVKVAKILLEHGANVDLRT-GRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPL-HQAA  581 (1143)
T ss_pred             hhccchhhhhhhh-hhHHHHHHHhhcCCceehhc-ccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChh-hHHH
Confidence            8899999999998 99999999999999999998 8999999999999999999999999999999999999999 9999


Q ss_pred             Hhhh---cccccceeehhHHHHhhhcccchhHHHHhhhchhHHHHHHHhh
Q psy15068        662 LMNS---AKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYSFLERLEEVL  708 (710)
Q Consensus       662 ~~~~---~~~L~~~~g~~~~~~~~~~~G~t~l~~a~~~~~~~~~~~~~~~  708 (710)
                      ..|+   +.+| +++||++  |..|.+|.|||++|++.|+.++.++....
T Consensus       582 ~~G~~~i~~LL-lk~GA~v--na~d~~g~TpL~iA~~lg~~~~~k~l~~~  628 (1143)
T KOG4177|consen  582 QQGHNDIAELL-LKHGASV--NAADLDGFTPLHIAVRLGYLSVVKLLKVV  628 (1143)
T ss_pred             HcChHHHHHHH-HHcCCCC--CcccccCcchhHHHHHhcccchhhHHHhc
Confidence            9998   8888 9999999  99999999999999999998876665543

>KOG4177|consensus

Probab=100.00  E-value=1.7e-67  Score=550.31  Aligned_cols=595  Identities=25%  Similarity=0.329  Sum_probs=515.0

Q ss_pred             ccccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcC
Q psy15068         22 YRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQG  101 (710)
Q Consensus        22 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g  101 (710)
                      .+.||++.|+.+|+.++.+++++.+..++..+..|.||||.|++.|+.++++.|+..|+ .++.++..|.||||.|+..|
T Consensus        53 ~~~~pl~~aa~~~~~~v~~~ll~~~a~v~~~~~~~~~plh~a~~~~~a~~v~~ll~~ga-~~~~~~~~~lTpLh~aa~~g  131 (1143)
T KOG4177|consen   53 SGFTPLHIAAHYGNENVAELLLNRGAIVNATARNGITPLHVASKRGDAEMVKLLLCRGA-QIDARDRDGLTPLHCAARKG  131 (1143)
T ss_pred             cccCHHHHHhhhhhhhhhhhhhccccccCcccccCccHHHHHHhhcchhHHHHHHhccC-chhhcccCCCcchhhhcccc
Confidence            78899999999999999999999999999999999999999999999999999999999 99999999999999999999


Q ss_pred             cHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHH
Q psy15068        102 LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISML  181 (710)
Q Consensus       102 ~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~L  181 (710)
                      +.+++.+|+..+++++.+|+.|.||+++|+.   ...++++.++..      .+.. +++.+...+      +.++++++
T Consensus       132 ~~~~~~~ll~~~a~~~~k~~~g~t~l~~a~~---~~~~~ll~~~~~------~d~l-~~~~~~~~~------~~~~~~ll  195 (1143)
T KOG4177|consen  132 HVQVIELLLQHGAPINIKTKNGLSPLHMAAQ---VACARLLLEYKA------PDYL-RLHVAAHCG------HARVAKLL  195 (1143)
T ss_pred             cHHHHHHHHHccCCCcccccCCCCchhhhcc---hhhhHHhhhccc------chhh-hhhHHhhcc------hHHHHhhh
Confidence            9999999999999999999999999999887   566666666544      2222 556666666      77777777


Q ss_pred             HHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCC
Q psy15068        182 IENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISD  261 (710)
Q Consensus       182 l~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~  261 (710)
                      +...++.+.... .+.||+|.|+..+.++++++++.+|+++...+..+.+| +|.|+..|+++++. ++..+++.++..+
T Consensus       196 ~~~~~~~~a~~~-~~~tpl~~a~~~nri~~~eLll~~gadv~a~d~~gl~~-lh~a~~~g~~~i~~-~l~~~ga~~~~~~  272 (1143)
T KOG4177|consen  196 LDKKADPNASAL-NGFTPLHIACKKNRIKVVELLLKHGADVSAKDESGLTP-LHVAAFMGHLDIVK-LLLQHGASVNVST  272 (1143)
T ss_pred             hcccCCcccccc-CCCCchhhhccccccceeeeeeeccCcCCcccccCccH-HHHHHhccchhHHH-HHHhcccccCccc
Confidence            777777777666 77777777777777777777777777777777777777 77777777777777 7777777777777


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCcchhhhhh
Q psy15068        262 GDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVM  341 (710)
Q Consensus       262 ~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~  341 (710)
                      ..|.||+|.|+..+..+++++|+++|+++...+....||++.+...+..  +++.++++ .+..++....          
T Consensus       273 vr~~tplh~AA~~~~~e~~~~ll~~ga~~~~~~~~~kt~l~~a~~~g~~--~i~~~~l~-~~~~~~aar~----------  339 (1143)
T KOG4177|consen  273 VRGETPLHMAARAGQVEVCKLLLQNGADVLAKARDDQTPLHIASRLGHE--EIVHLLLQ-AGATPNAART----------  339 (1143)
T ss_pred             ccccCcchhhhccchhhhHhhhhccCcccccccccccChhhhhcccchH--HHHHHHhh-ccCCccccCc----------
Confidence            7777777777777777777777777777777777777777777777755  77777766 3333322211          


Q ss_pred             ccCCcccccHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCc
Q psy15068        342 SLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSD  421 (710)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~  421 (710)
                        ............+..++...+.+.+..-...++.+.+|++.|+..|+.++++.++..|++++.....           
T Consensus       340 --~g~t~lHlaa~~~~~~~~~~l~~~~~~~~~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~~~~~gk~-----------  406 (1143)
T KOG4177|consen  340 --AGYTPLHLAAKEGQVEVAGALLEHGAQRRQAEEKGFTPLHLAVKSGRVSVVELLLEAGADPNSAGKN-----------  406 (1143)
T ss_pred             --CCcccccHhhhhhhHHHHHHhhccccccCcccccCCcchhhhcccCchhHHHhhhhccCCcccCCCC-----------
Confidence              1122223344555556777777788888888899999999999999999999999999999888877           


Q ss_pred             cccCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcC-CHhHHHHHHHcCCCCCchhhccchHHHHhh
Q psy15068        422 FCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSG-DFQIVKELQNYGAQIDKENYLKNKEAARIA  500 (710)
Q Consensus       422 ~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~-~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l  500 (710)
                        |.||||.|+.+ ++..+++.++++|++++.. +..|.||+|.|+..| ..++...++..|++++...  ..|.+|  +
T Consensus       407 --gvTplh~aa~~-~~~~~v~l~l~~gA~~~~~-~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s--~~G~T~--L  478 (1143)
T KOG4177|consen  407 --GVTPLHVAAHY-GNPRVVKLLLKRGASPNAK-AKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVS--KQGFTP--L  478 (1143)
T ss_pred             --Ccceeeehhhc-cCcceEEEEeccCCChhhH-hhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhc--cccCcc--h
Confidence              99999999999 9999999999999999999 999999999999999 8999999999999999988  999999  9


Q ss_pred             hhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccc
Q psy15068        501 HSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFK  580 (710)
Q Consensus       501 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~  580 (710)
                      |.+                      ...++.++++.+++.++..+.....+-+++|.|...+...+++.++++|++++.+
T Consensus       479 hla----------------------aq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~  536 (1143)
T KOG4177|consen  479 HLA----------------------AQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLR  536 (1143)
T ss_pred             hhh----------------------hccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehh
Confidence            999                      9999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHH
Q psy15068        581 SATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRI  660 (710)
Q Consensus       581 ~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A  660 (710)
                      +..|+||||.|+.+ |+.++|++|+++|++++.++ +.|+||||.|+..|+.+++.+|+++|+++|..|.+|.||| |+|
T Consensus       537 ~~r~~TpLh~A~~~-g~v~~VkfLLe~gAdv~ak~-~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL-~iA  613 (1143)
T KOG4177|consen  537 TGRGYTPLHVAVHY-GNVDLVKFLLEHGADVNAKD-KLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPL-HIA  613 (1143)
T ss_pred             cccccchHHHHHhc-CCchHHHHhhhCCccccccC-CCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchh-HHH
Confidence            99999999999999 99999999999999999999 9999999999999999999999999999999999999999 999


Q ss_pred             HHhhh---cccccceeehh-----HHHHhhhcccchhHHHHhhhch
Q psy15068        661 ELMNS---AKQLGLVHVFE-----IMKVVKNYAGETLIGVARKMNY  698 (710)
Q Consensus       661 ~~~~~---~~~L~~~~g~~-----~~~~~~~~~G~t~l~~a~~~~~  698 (710)
                      +..|+   +++| +..|+.     .  ...+..|.||..++-....
T Consensus       614 ~~lg~~~~~k~l-~~~~~~~~~~~~--~~e~~~g~~p~~v~e~~~~  656 (1143)
T KOG4177|consen  614 VRLGYLSVVKLL-KVVTATPAATDP--VKENRKGAVPEDVAEELDT  656 (1143)
T ss_pred             HHhcccchhhHH-HhccCccccccc--hhhhhcccChhhHHHHhhh
Confidence            99999   8899 889988     6  7789999999999866544

>PHA02876 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2.4e-57  Score=490.40  Aligned_cols=347  Identities=25%  Similarity=0.245  Sum_probs=281.4

Q ss_pred             HHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHH
Q psy15068        234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTH  313 (710)
Q Consensus       234 l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~  313 (710)
                      ++.|+..++.++++ +|.+.|++++..+..|.||||+|+..|+.++|++|+++|++++..+..|.|||+.|+..++.  +
T Consensus       149 l~~~i~~~~~~i~k-~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~--~  225 (682)
T PHA02876        149 IKERIQQDELLIAE-MLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNI--D  225 (682)
T ss_pred             HHHHHHCCcHHHHH-HHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCH--H
Confidence            66677777777777 67777777777777788888888888888888888888888877777788888888877776  4


Q ss_pred             HHHHHhhcccccCCCCCCCCcchhhhhhccCCcccccHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHH
Q psy15068        314 VAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQS  393 (710)
Q Consensus       314 ~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~  393 (710)
                      ++++|+                                              +.+.+++.    +.++++.|+..++.++
T Consensus       226 ivk~Ll----------------------------------------------~~~~~~~~----~~~~L~~ai~~~~~~~  255 (682)
T PHA02876        226 TIKAII----------------------------------------------DNRSNINK----NDLSLLKAIRNEDLET  255 (682)
T ss_pred             HHHHHH----------------------------------------------hcCCCCCC----CcHHHHHHHHcCCHHH
Confidence            444444                                              34444332    2367888888888888


Q ss_pred             HHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcH-HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcC-C
Q psy15068        394 AKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNI-EMVKLLLLHGADVNDTSNKPKQKPLAVAIQSG-D  471 (710)
Q Consensus       394 ~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~-~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~-~  471 (710)
                      +++|++.|++++..+..             |.||||+|+.. ++. +++++|++.|++++.. +..|.||||+|+..| .
T Consensus       256 ~~~Ll~~g~~vn~~d~~-------------g~TpLh~Aa~~-~~~~~iv~lLl~~gadin~~-d~~g~TpLh~Aa~~g~~  320 (682)
T PHA02876        256 SLLLYDAGFSVNSIDDC-------------KNTPLHHASQA-PSLSRLVPKLLERGADVNAK-NIKGETPLYLMAKNGYD  320 (682)
T ss_pred             HHHHHHCCCCCCCCCCC-------------CCCHHHHHHhC-CCHHHHHHHHHHCCCCCCCc-CCCCCCHHHHHHHhCCC
Confidence            88888888888776666             78888888887 554 6888888888888777 778888888888887 5


Q ss_pred             HhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhh-cCchHHHHHHHhcCCcccccCCC
Q psy15068        472 FQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVR-SNKYDEVKKNIEDGACVNVSSER  550 (710)
Q Consensus       472 ~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~~~~~~~~~~  550 (710)
                      .+++++|+..|++++..+  ..+.+|  +|.|                      +. .+..++++.|++.|++++.++..
T Consensus       321 ~~~v~~Ll~~gadin~~d--~~g~Tp--Lh~A----------------------~~~~~~~~iv~lLl~~gadin~~d~~  374 (682)
T PHA02876        321 TENIRTLIMLGADVNAAD--RLYITP--LHQA----------------------STLDRNKDIVITLLELGANVNARDYC  374 (682)
T ss_pred             HHHHHHHHHcCCCCCCcc--cCCCcH--HHHH----------------------HHhCCcHHHHHHHHHcCCCCccCCCC
Confidence            788888888888888877  778888  8877                      44 45677888888888888889999


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCC
Q psy15068        551 RGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGK  630 (710)
Q Consensus       551 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~  630 (710)
                      |.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++...++++|+++|++++.++ ..|+||||+|+..+
T Consensus       375 G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d-~~G~TpLh~Aa~~~  453 (682)
T PHA02876        375 DKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKN-KDLSTPLHYACKKN  453 (682)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCC-CCCChHHHHHHHhC
Confidence            99999999999999999999999999999999999999999887455678899999999999998 89999999999866


Q ss_pred             -ChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh-cccccceeehhH
Q psy15068        631 -NRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS-AKQLGLVHVFEI  677 (710)
Q Consensus       631 -~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~-~~~L~~~~g~~~  677 (710)
                       +.+++++|+++|+++|.+|..|.||| ++|+..+. +++| +.+|+++
T Consensus       454 ~~~~iv~lLl~~Gad~n~~d~~g~tpl-~~a~~~~~~v~~L-l~~~a~~  500 (682)
T PHA02876        454 CKLDVIEMLLDNGADVNAINIQNQYPL-LIALEYHGIVNIL-LHYGAEL  500 (682)
T ss_pred             CcHHHHHHHHHCCCCCCCCCCCCCCHH-HHHHHhCCHHHHH-HHCCCCC
Confidence             67999999999999999999999999 99987777 8888 8888877

>PHA02876 ankyrin repeat protein; Provisional

Probab=100.00  E-value=5.1e-55  Score=472.33  Aligned_cols=482  Identities=23%  Similarity=0.288  Sum_probs=374.4

Q ss_pred             hhhhhhcChh-hHHHHH-----HhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHc
Q psy15068         27 LFSEIMFSEE-DAFGYF-----LQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQ  100 (710)
Q Consensus        27 l~~a~~~~~~-~~~~~l-----l~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~  100 (710)
                      |+.++..|+. +++..+     +.+|++....+..+.||||+|+..|+.|+|++|++..+..++..|..|.||||+|+..
T Consensus         6 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~LH~A~~~g~~e~V~~ll~~~~~~~~~~~~~~~tpLh~a~~~   85 (682)
T PHA02876          6 LYRIMCRGNCIDILSAIDNYDLHKHGANQCENESIPFTAIHQALQLRQIDIVEEIIQQNPELIYITDHKCHSTLHTICII   85 (682)
T ss_pred             HHHHHhcCchHHHHHHHHHHHHhhhhhhhcccccccchHHHHHHHHHhhhHHHHHHHhCcccchhhchhhccccccccCC
Confidence            4455555554 434333     3457777777888999999999999999999999998844778889999999999988


Q ss_pred             CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhC--CCCccc----cccCCCchhHHhhhccCCCCCCH
Q psy15068        101 GLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSK--KADVRA----KCSMMVTPILAVSANMSEDSTDT  174 (710)
Q Consensus       101 g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~--g~~~~~----~~~~~~~~l~~a~~~~~~~~~~~  174 (710)
                      ++.  +..++......+.....+.+....+.......+++.|.+.  +.++..    ......++++.++..+      +
T Consensus        86 ~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~------~  157 (682)
T PHA02876         86 PNV--MDIVISLTLDCDIILDIKYASIILNKHKLDEACIHILKEAISGNDIHYDKINESIEYMKLIKERIQQD------E  157 (682)
T ss_pred             CCc--cccccccccchhhcccccHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHhhccchhhhHHHHHHHHCC------c
Confidence            873  3334333222223333344444444333333333333332  222221    1223345677777777      8


Q ss_pred             HHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCC
Q psy15068        175 NEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKN  254 (710)
Q Consensus       175 ~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~  254 (710)
                      .+++++|++.|++++..+. .|.||||.|+..|+.+++++|+++|++++..+..+.+| |+.|+..++.++++ +|.+.+
T Consensus       158 ~~i~k~Ll~~Gadvn~~d~-~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~-L~~A~~~~~~~ivk-~Ll~~~  234 (682)
T PHA02876        158 LLIAEMLLEGGADVNAKDI-YCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSV-LECAVDSKNIDTIK-AIIDNR  234 (682)
T ss_pred             HHHHHHHHhCCCCCCCCCC-CCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCH-HHHHHHcCCHHHHH-HHHhcC
Confidence            8888888888888888877 88888888888888888888888888888887777777 88888888888888 555555


Q ss_pred             CccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCc
Q psy15068        255 FDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPN  334 (710)
Q Consensus       255 ~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~  334 (710)
                      .+++.    +.++++.|+..++.+++++|++.|++++..+..|.||||+|+..++.  .                     
T Consensus       235 ~~~~~----~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~--~---------------------  287 (682)
T PHA02876        235 SNINK----NDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSL--S---------------------  287 (682)
T ss_pred             CCCCC----CcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCH--H---------------------
Confidence            55432    34788889999999999999999999888888899999999887753  1                     


Q ss_pred             chhhhhhccCCcccccHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC-CHHHHHHHHHcCCCCCchhhhhhh
Q psy15068        335 LLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHC-DLQSAKYLIQKGANVNLTETQKAF  413 (710)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~-~~~~~~~Ll~~g~~~~~~~~~~~~  413 (710)
                                              +++++|++.|++++.++..|.||||.|+..| +.++++.|+..|++++..+..   
T Consensus       288 ------------------------~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~---  340 (682)
T PHA02876        288 ------------------------RLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRL---  340 (682)
T ss_pred             ------------------------HHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccC---
Confidence                                    4566677788888888889999999999888 588999999999998887777   


Q ss_pred             hhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccc
Q psy15068        414 ISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKN  493 (710)
Q Consensus       414 ~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~  493 (710)
                                |.||||+|+...++.+++++|++.|++++.. +..|.||||+|+..|+.+++++|+++|++++..+  ..
T Consensus       341 ----------g~TpLh~A~~~~~~~~iv~lLl~~gadin~~-d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~--~~  407 (682)
T PHA02876        341 ----------YITPLHQASTLDRNKDIVITLLELGANVNAR-DYCDKTPIHYAAVRNNVVIINTLLDYGADIEALS--QK  407 (682)
T ss_pred             ----------CCcHHHHHHHhCCcHHHHHHHHHcCCCCccC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccC--CC
Confidence                      8999999988656888999999999999888 8889999999999999999999999999988887  77


Q ss_pred             hHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcC-CHHHHHHHHH
Q psy15068        494 KEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKG-YEEIVDLLLD  572 (710)
Q Consensus       494 ~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~  572 (710)
                      +.+|  +|.|+                     ...+...++++|++.|+++|.++..|+||||+|+..+ +.+++++|++
T Consensus       408 g~T~--Lh~A~---------------------~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~  464 (682)
T PHA02876        408 IGTA--LHFAL---------------------CGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLD  464 (682)
T ss_pred             CCch--HHHHH---------------------HcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHH
Confidence            8888  88882                     2334456788889999999999999999999999876 6799999999


Q ss_pred             cCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCC
Q psy15068        573 NGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYD  612 (710)
Q Consensus       573 ~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~  612 (710)
                      +|++++.+|..|.|||++|+.. +  ++++.|+.+|+++.
T Consensus       465 ~Gad~n~~d~~g~tpl~~a~~~-~--~~v~~Ll~~~a~~~  501 (682)
T PHA02876        465 NGADVNAINIQNQYPLLIALEY-H--GIVNILLHYGAELR  501 (682)
T ss_pred             CCCCCCCCCCCCCCHHHHHHHh-C--CHHHHHHHCCCCCC
Confidence            9999999999999999999876 4  47888899888755

>PHA02917 ankyrin-like protein; Provisional

Probab=100.00  E-value=4e-53  Score=441.45  Aligned_cols=441  Identities=17%  Similarity=0.181  Sum_probs=299.9

Q ss_pred             HHHHHHHHhcCCCCCccccCCCCcHHHHHHHc---CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHH----HHHH
Q psy15068         69 IREVEFLLSTGDHDVNEKLQDGRTALYMAILQ---GLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKN----IVKF  141 (710)
Q Consensus        69 ~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~----iv~~  141 (710)
                      ++.|+.|+..+. .++.+|..|+||||+|+..   |+.+++++|++.|++++..+..|.||||+|+..|+.+    +++.
T Consensus        12 ~~~~~~l~~~~~-~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~   90 (661)
T PHA02917         12 LDELKQMLRDRD-PNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMA   90 (661)
T ss_pred             HHHHHHHHhccC-cccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHH
Confidence            567888888777 7777788888888887554   7788888888888888888888888888888888844    5567


Q ss_pred             HHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHH--HhCCHHHHHHHHhCC
Q psy15068        142 LLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAV--VKKNLSVVELLIKCK  219 (710)
Q Consensus       142 Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~--~~~~~~~v~~Ll~~g  219 (710)
                      |++++...+..+.  .+++++|+.++      +.+++++|+++|++++.++. .|.|||+.|+  ..|+.+++++|+++|
T Consensus        91 Ll~~~~~~n~~~~--~~~~~~a~~~~------~~e~vk~Ll~~Gadin~~d~-~g~T~L~~~~a~~~~~~eivklLi~~G  161 (661)
T PHA02917         91 LLEATGYSNINDF--NIFSYMKSKNV------DVDLIKVLVEHGFDLSVKCE-NHRSVIENYVMTDDPVPEIIDLFIENG  161 (661)
T ss_pred             HHhccCCCCCCCc--chHHHHHhhcC------CHHHHHHHHHcCCCCCccCC-CCccHHHHHHHccCCCHHHHHHHHHcC
Confidence            7776543333221  25566777777      88888888888888888777 8889998543  567899999999999


Q ss_pred             CCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHH-----------cCCHHHHHHHHHcCC
Q psy15068        220 ADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACH-----------VGNLQIVQMLVKRKF  288 (710)
Q Consensus       220 ~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~-----------~~~~~~v~~Ll~~g~  288 (710)
                      ++++..+..+..-         .    . +       .+.....+.||||+|+.           .++.+++++|+++|+
T Consensus       162 a~vn~~d~~~~~g---------~----~-~-------~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Ga  220 (661)
T PHA02917        162 CSVLYEDEDDEYG---------Y----A-Y-------DDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGI  220 (661)
T ss_pred             CCccccccccccc---------c----c-c-------ccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCC
Confidence            9887554321100         0    0 0       01123344578888765           357788888888888


Q ss_pred             CCCCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCcchhhhhhccCCcccccHHHHHHHHHHHHHHHhcC
Q psy15068        289 DINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRT  368 (710)
Q Consensus       289 ~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  368 (710)
                      +++..+..|.||||+|+..|+...+++++|++                                               |
T Consensus       221 dvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-----------------------------------------------g  253 (661)
T PHA02917        221 KPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-----------------------------------------------G  253 (661)
T ss_pred             CcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-----------------------------------------------C
Confidence            88888888888888888877764445555432                                               3


Q ss_pred             CCCC----CCCCCCCcHHHHHHHc---------CCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHcc
Q psy15068        369 ENIN----AEGDDMITPLLFAAKH---------CDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHK  435 (710)
Q Consensus       369 ~~~~----~~~~~~~t~L~~A~~~---------~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~  435 (710)
                      ++++    ..+..+.+|++.|+..         .+.++++.|++.|++.                   +.++++++... 
T Consensus       254 ~d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~-------------------~~~~~~~~~~~-  313 (661)
T PHA02917        254 IDNTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPH-------------------GIMCSIVPLWR-  313 (661)
T ss_pred             CcccccccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCCC-------------------ceeEeeecccc-
Confidence            3332    2444566777777732         1667888888888753                   45667777776 


Q ss_pred             CcHHHHHHHHH-CCCCCCCCCCCCCCCHHHHHHHcCC--HhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhh
Q psy15068        436 NNIEMVKLLLL-HGADVNDTSNKPKQKPLAVAIQSGD--FQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKI  512 (710)
Q Consensus       436 ~~~~~~~~Ll~-~~~~~~~~~~~~~~t~L~~A~~~~~--~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~  512 (710)
                      ++.+++++++. .+.++.       .+++..++..|.  .+++++|++.|++++..+  ..|.++               
T Consensus       314 ~~~~~~~~~~~~~~~~~~-------~~~l~~~~~~g~~~~~~v~~Ll~~GAdvn~~~--~~g~~~---------------  369 (661)
T PHA02917        314 NDKETISLILKTMNSDVL-------QHILIEYMTFGDIDIPLVECMLEYGAVVNKEA--IHGYFR---------------  369 (661)
T ss_pred             cchHHHHHHHHHhchHHH-------HHHHHHHHHcCCCcHHHHHHHHHcCCCCCCCC--ccccch---------------
Confidence            77788877773 343321       122333444555  457888888888887766  444443               


Q ss_pred             hHHHhhhHHHHHhhhcCchHHHHHHHh-cCCcccccCCCCCcHHHHHHHcC-----------------------CHHHHH
Q psy15068        513 NDLLKLNLDFLKNVRSNKYDEVKKNIE-DGACVNVSSERRGSALIYVAWKG-----------------------YEEIVD  568 (710)
Q Consensus       513 ~~~~~~~~~~~~~~~~~~~~~~~~ll~-~~~~~~~~~~~g~t~L~~A~~~~-----------------------~~~~v~  568 (710)
                                   ......+++++|+. .|++++..+.+|+||||.|++.+                       ..++++
T Consensus       370 -------------~~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  436 (661)
T PHA02917        370 -------------NINIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILSTIN  436 (661)
T ss_pred             -------------hhcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHHHH
Confidence                         33445667777776 57776666667888888776443                       245567


Q ss_pred             HHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHh-CCChhHHHHHHhhhhccc
Q psy15068        569 LLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEA-GKNRDIIDLLHLIDNLFA  646 (710)
Q Consensus       569 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~~~  646 (710)
                      +|+++|+|+|.+|..|+||||+|+.. ++.+++++|+++|++++..+ ..|.||||+|+. .++.+++++|+++|++++
T Consensus       437 ~Ll~~GAdIN~kd~~G~TpLh~Aa~~-~~~~~v~~Ll~~GAdin~~d-~~G~T~L~~A~~~~~~~~iv~~LL~~ga~i~  513 (661)
T PHA02917        437 ICLPYLKDINMIDKRGETLLHKAVRY-NKQSLVSLLLESGSDVNIRS-NNGYTCIAIAINESRNIELLKMLLCHKPTLD  513 (661)
T ss_pred             HHHHCCCCCCCCCCCCcCHHHHHHHc-CCHHHHHHHHHCcCCCCCCC-CCCCCHHHHHHHhCCCHHHHHHHHHcCCChh
Confidence            77777777777777777777777766 67777777777777777776 677777777774 566777777777776655

>PHA02917 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.6e-52  Score=436.90  Aligned_cols=452  Identities=19%  Similarity=0.165  Sum_probs=362.6

Q ss_pred             hhHHHHHHhhhccCCCccccchhHHHHHHhc---CCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcH----HHHHH
Q psy15068         36 EDAFGYFLQGIINSSSAKSVELTLLCSAVWD---NKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLY----KMVTL  108 (710)
Q Consensus        36 ~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~----~~v~~  108 (710)
                      ++.++.|+..|..++.+|.+|.||||.|+..   |+.++|++|++.|+ +++.++..|+||||+|+..|+.    ++++.
T Consensus        12 ~~~~~~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga-~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~   90 (661)
T PHA02917         12 LDELKQMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGT-NPLHKNWRQLTPLEEYTNSRHVKVNKDIAMA   90 (661)
T ss_pred             HHHHHHHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCC-CccccCCCCCCHHHHHHHcCChhHHHHHHHH
Confidence            6788999999999999999999999997555   88999999999999 9999999999999999999985    45678


Q ss_pred             HHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHh--hhccCCCCCCHHHHHHHHHHcCC
Q psy15068        109 LIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAV--SANMSEDSTDTNEIISMLIENGA  186 (710)
Q Consensus       109 Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a--~~~~~~~~~~~~~~~~~Ll~~~~  186 (710)
                      |++.+..++..+  ..+++++|+.+|+.++|++|+++|++++.++..|.|||+.+  +..+      +.+++++|+++|+
T Consensus        91 Ll~~~~~~n~~~--~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~------~~eivklLi~~Ga  162 (661)
T PHA02917         91 LLEATGYSNIND--FNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDP------VPEIIDLFIENGC  162 (661)
T ss_pred             HHhccCCCCCCC--cchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCC------CHHHHHHHHHcCC
Confidence            888754444443  23778889999999999999999999999999999999954  3567      9999999999999


Q ss_pred             CcccCCC--CCC-----------CCHHHHHHH-----------hCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCc
Q psy15068        187 NVREKMP--FTD-----------FSPLHFAVV-----------KKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNS  242 (710)
Q Consensus       187 ~~~~~~~--~~~-----------~~~l~~A~~-----------~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~  242 (710)
                      +++..+.  ..|           .||||+|+.           .++.+++++|++.|++++..+..|.+| ||+|+.+|+
T Consensus       163 ~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~Tp-Lh~A~~~g~  241 (661)
T PHA02917        163 SVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTA-LQYYIKSSH  241 (661)
T ss_pred             CccccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcH-HHHHHHcCC
Confidence            9975432  123           599999986           468999999999999999999999999 999999998


Q ss_pred             H--HHHHHHHccCCCccc----cCCCCCCcHHHHHHHc---------CCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHh
Q psy15068        243 V--KIVEAFLNSKNFDVS----ISDGDLNSLLHKACHV---------GNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGM  307 (710)
Q Consensus       243 ~--~~v~~lL~~~~~~~~----~~~~~~~t~L~~A~~~---------~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~  307 (710)
                      .  ++|+ +|.+ |++++    ..+..+.+|+++|+.-         .+.++|++|++.|++      .+.++++++...
T Consensus       242 ~~~eivk-~Li~-g~d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~------~~~~~~~~~~~~  313 (661)
T PHA02917        242 IDIDIVK-LLMK-GIDNTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKP------HGIMCSIVPLWR  313 (661)
T ss_pred             CcHHHHH-HHHh-CCcccccccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCC------CceeEeeecccc
Confidence            5  7999 5654 77664    4566778888888831         278999999999985      245678888877


Q ss_pred             CCCcHHHHHHHhhcccccCCCCCCCCcchhhhhhccCCcccccHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q psy15068        308 GRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAK  387 (710)
Q Consensus       308 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~  387 (710)
                      +..  +++.+++...                                             +.++      -.+++..++.
T Consensus       314 ~~~--~~~~~~~~~~---------------------------------------------~~~~------~~~~l~~~~~  340 (661)
T PHA02917        314 NDK--ETISLILKTM---------------------------------------------NSDV------LQHILIEYMT  340 (661)
T ss_pred             cch--HHHHHHHHHh---------------------------------------------chHH------HHHHHHHHHH
Confidence            766  7777666411                                             1111      0023344445


Q ss_pred             cCC--HHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHH-CCCCCCCCCCCCCCCHHH
Q psy15068        388 HCD--LQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLL-HGADVNDTSNKPKQKPLA  464 (710)
Q Consensus       388 ~~~--~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~-~~~~~~~~~~~~~~t~L~  464 (710)
                      .|.  .+++++|++.|++++..+..             |.++.    .. .+.+++++|+. .|++++.. +..|.||||
T Consensus       341 ~g~~~~~~v~~Ll~~GAdvn~~~~~-------------g~~~~----~~-~~~~~i~~LL~~~ga~~~~~-~~~G~TpL~  401 (661)
T PHA02917        341 FGDIDIPLVECMLEYGAVVNKEAIH-------------GYFRN----IN-IDSYTMKYLLKKEGGDAVNH-LDDGEIPIG  401 (661)
T ss_pred             cCCCcHHHHHHHHHcCCCCCCCCcc-------------ccchh----hc-CCHHHHHHHHHhcCCCcccc-CCCCCChhH
Confidence            665  56999999999999976666             77754    24 67888888887 68888777 567999999


Q ss_pred             HHHHcCCH--hHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCC
Q psy15068        465 VAIQSGDF--QIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGA  542 (710)
Q Consensus       465 ~A~~~~~~--~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~  542 (710)
                      .|++++..  ++..+...+|.            ..    .+                      ...+..++++.|+++|+
T Consensus       402 ~a~~~~~~~~~~~~~~~~~~~------------~~----~~----------------------~~~~~~~~v~~Ll~~GA  443 (661)
T PHA02917        402 HLCKSNYGCYNFYTYTYKKGL------------CD----MS----------------------YACPILSTINICLPYLK  443 (661)
T ss_pred             HHHHhcccchhhhhhhhhhcc------------ch----hh----------------------hhhhhHHHHHHHHHCCC
Confidence            99887553  43333322221            00    00                      22347889999999999


Q ss_pred             cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCC
Q psy15068        543 CVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKD  615 (710)
Q Consensus       543 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~  615 (710)
                      ++|.++..|.||||+|+..++.+++++|+++|++++.+|..|+||||+|+...++.+++++|+++|++++...
T Consensus       444 dIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~G~T~L~~A~~~~~~~~iv~~LL~~ga~i~~i~  516 (661)
T PHA02917        444 DINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNIELLKMLLCHKPTLDCVI  516 (661)
T ss_pred             CCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCCHHHHHHHHHcCCChhHHH
Confidence            9999999999999999999999999999999999999999999999999963288999999999999987554

>PHA02730 ankyrin-like protein; Provisional

Probab=100.00  E-value=3.2e-49  Score=398.43  Aligned_cols=467  Identities=15%  Similarity=0.113  Sum_probs=271.8

Q ss_pred             hhHHHHHHhhhccCC-CccccchhHHHHHHhcC---CHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcC--cHHHHHHH
Q psy15068         36 EDAFGYFLQGIINSS-SAKSVELTLLCSAVWDN---KIREVEFLLSTGDHDVNEKLQDGRTALYMAILQG--LYKMVTLL  109 (710)
Q Consensus        36 ~~~~~~ll~~~~~~~-~~~~~~~t~L~~A~~~g---~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g--~~~~v~~L  109 (710)
                      ...++..++...++| .+|..|+||||+|+..|   +.|+|++|+++|+ +++.+|..|+||||+|+..+  +.|++++|
T Consensus        20 ~~~~~~~~~~~~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GA-din~kD~~G~TPLh~Aa~~~~~~~eIv~~L   98 (672)
T PHA02730         20 YKKIKLEIETCHNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGV-ERLCRNNEGLTPLGVYSKRKYVKSQIVHLL   98 (672)
T ss_pred             HHHHHHHHHHhcchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCC-CCcccCCCCCChHHHHHHcCCCcHHHHHHH
Confidence            445566666555665 56666667777666665   3666777666666 66666666667776666655  56666666


Q ss_pred             HHcCCC--CCCCCCCCCCHHHHHHh--cCCHHHHHHHHh-CCCCcccccc-----CCCchhHHhhhccCCCCCCHHHHHH
Q psy15068        110 IHHGAN--VNDRDEKGYTPLHLACY--LGNKNIVKFLLS-KKADVRAKCS-----MMVTPILAVSANMSEDSTDTNEIIS  179 (710)
Q Consensus       110 l~~g~~--~~~~~~~~~t~L~~A~~--~g~~~iv~~Ll~-~g~~~~~~~~-----~~~~~l~~a~~~~~~~~~~~~~~~~  179 (710)
                      ++.|++  ++..+..+.+||+.++.  +++.++|++|++ .+++++....     .|.+|++++..++      +.++|+
T Consensus        99 l~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~------~~eIvk  172 (672)
T PHA02730         99 ISSYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNP------RPEVLL  172 (672)
T ss_pred             HhcCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCC------chHHHH
Confidence            666443  35555556666666666  666666666664 4455554422     4455555555555      555555


Q ss_pred             HHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHH------HhcCcHHHHHHHHccC
Q psy15068        180 MLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFA------IESNSVKIVEAFLNSK  253 (710)
Q Consensus       180 ~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A------~~~~~~~~v~~lL~~~  253 (710)
                      +|+++|++++-..- .+                          ...+....+|+|+++      ..+++.++++ +|+++
T Consensus       173 lLi~~g~~v~g~~~-~~--------------------------~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~-lLIs~  224 (672)
T PHA02730        173 WLLKSECYSTGYVF-RS--------------------------CMYDSDRCKNSLHYYILSHRESESLSKDVIK-CLIDN  224 (672)
T ss_pred             HHHHcCCccccccc-cc--------------------------ccccCCccchhHHHHHHhhhhhhccCHHHHH-HHHHC
Confidence            55555554420000 00                          012223334444432      3456788888 88888


Q ss_pred             CCccccCCCCCCcHHHH--HHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCC
Q psy15068        254 NFDVSISDGDLNSLLHK--ACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIK  331 (710)
Q Consensus       254 ~~~~~~~~~~~~t~L~~--A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~  331 (710)
                      |++++..|..|.||||+  +...++.+++++|++...+.+..+... ++    ...|    =+..||-.......     
T Consensus       225 GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~-~~----~~~~----~~~~~~~~~~~~~~-----  290 (672)
T PHA02730        225 NVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDIS-QP----YIRG----VLADYLNKRFRVTP-----  290 (672)
T ss_pred             CCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhcccccccccccc-ch----hhhh----hHHHhhhhhhhccc-----
Confidence            88888888888888885  445567888888887433222111100 00    0000    11122211100000     


Q ss_pred             CCcchhhhhhccCCcccccHHHHHHHHHHHHHHHhcCCCC-------CCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q psy15068        332 RPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENI-------NAEGDDMITPLLFAAKHCDLQSAKYLIQKGANV  404 (710)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~-------~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~  404 (710)
                                     .+.       ..++++.|++.+...       ...+..|.          +..++..++..--+.
T Consensus       291 ---------------~~~-------d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~----------n~~~~~~i~~~~~~~  338 (672)
T PHA02730        291 ---------------YNV-------DMEIVNLLIEGRHTLIDVMRSITSYDSREY----------NHYIIDNILKRFRQQ  338 (672)
T ss_pred             ---------------CCc-------chHHHHHHhhccCcchhhhhcccccccccc----------chhHHHHHHHhhhcc
Confidence                           000       004445554433221       00111111          222333333221111


Q ss_pred             CchhhhhhhhhccccCccccCCHHHHHHHcc--CcHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCC----HhHHHHH
Q psy15068        405 NLTETQKAFISDARSSDFCFRSALQYACKHK--NNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGD----FQIVKEL  478 (710)
Q Consensus       405 ~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~--~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~----~~~v~~L  478 (710)
                      +...               -+-.|+.-...+  .+.+++++|+++|++++..  ..|.||||+|+..++    .+++++|
T Consensus       339 ~~~~---------------~q~~l~~Y~~~~~~v~ieIvelLIs~GAdIN~k--~~G~TpLH~Aa~~nnn~i~~eIvelL  401 (672)
T PHA02730        339 DESI---------------VQAMLINYLHYGDMVSIPILRCMLDNGATMDKT--TDNNYPLHDYFVNNNNIVDVNVVRFI  401 (672)
T ss_pred             chhH---------------HHHHHHHHHhcCCcCcHHHHHHHHHCCCCCCcC--CCCCcHHHHHHHHcCCcchHHHHHHH
Confidence            1000               112344444432  4689999999999999864  678899998888774    7999999


Q ss_pred             HHcCC--CCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHH
Q psy15068        479 QNYGA--QIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALI  556 (710)
Q Consensus       479 l~~~~--~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~  556 (710)
                      +++|+  +++..+  ..|.+|  +|.+.........          .........+++++|+++|+++|.+|..|.||||
T Consensus       402 Is~Ga~~dIN~kd--~~G~T~--Lh~~i~a~~~n~~----------~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh  467 (672)
T PHA02730        402 VENNGHMAINHVS--NNGRLC--MYGLILSRFNNCG----------YHCYETILIDVFDILSKYMDDIDMIDNENKTLLY  467 (672)
T ss_pred             HHcCCCccccccc--cCCCch--HhHHHHHHhcccc----------ccccchhHHHHHHHHHhcccchhccCCCCCCHHH
Confidence            99987  577776  777888  6632100000000          0000011346788999999999999999999999


Q ss_pred             HHHHcCCHHHHHHHHHcCCCCcccCC-CCCcHHHHHHhc-CCchHHHHHHHHcCCCCCCC
Q psy15068        557 YVAWKGYEEIVDLLLDNGADVNFKSA-TGFTALHMACRF-HSNDNIVRKLLHHGAYYDMK  614 (710)
Q Consensus       557 ~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~-~~~~~~v~~Ll~~g~~~~~~  614 (710)
                      +|+..++.+++++|+++|++++..|. .|.||||+|+.. .++.++++.|+++|+++...
T Consensus       468 ~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i~~I  527 (672)
T PHA02730        468 YAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHPTLETM  527 (672)
T ss_pred             HHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCCHHHH
Confidence            99999999999999999999998886 589999988863 26788999999998876543

>PHA02946 ankyin-like protein; Provisional

Probab=100.00  E-value=4.4e-48  Score=389.77  Aligned_cols=362  Identities=20%  Similarity=0.248  Sum_probs=259.0

Q ss_pred             HHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHH--cCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHH
Q psy15068         60 LCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAIL--QGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKN  137 (710)
Q Consensus        60 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~--~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~  137 (710)
                      ++.++..++.+.++.+++...      ...+.++||.++.  .++.+++++|+++|++++.+|..|.||||+|+..|+.+
T Consensus        13 l~~~~~~~n~~~~~~~l~~~~------~~g~~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~e   86 (446)
T PHA02946         13 LYAKYNSKNLDVFRNMLQAIE------PSGNYHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNR   86 (446)
T ss_pred             HHHHHccCcHHHHHHHHhccC------CCCCChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHH
Confidence            567888888899888887533      1224688887763  44678899999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHh
Q psy15068        138 IVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIK  217 (710)
Q Consensus       138 iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~  217 (710)
                      +|++|+++|++++.+|..|.||||+|+..+..    ..+++++|+++|++++......|.|||+ |+..++.+++++|++
T Consensus        87 iv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~----~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~  161 (446)
T PHA02946         87 IVAMLLTHGADPNACDKQHKTPLYYLSGTDDE----VIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMS  161 (446)
T ss_pred             HHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCc----hHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHh
Confidence            99999999999988888888888887765411    4566777777777666433336666664 444455555555555


Q ss_pred             CCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCCCCcC
Q psy15068        218 CKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVG--NLQIVQMLVKRKFDINAQNR  295 (710)
Q Consensus       218 ~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~--~~~~v~~Ll~~g~~~~~~~~  295 (710)
                      .|+++                                   +..+..|+||||+|+..+  +.+++++|+++|++++..|.
T Consensus       162 ~gad~-----------------------------------~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~  206 (446)
T PHA02946        162 IGFEA-----------------------------------RIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDH  206 (446)
T ss_pred             ccccc-----------------------------------cccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCC
Confidence            55444                                   445556666666665543  45777777777777777777


Q ss_pred             CCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCcchhhhhhccCCcccccHHHHHHHHHHHHHHHhcCCCCCCCC
Q psy15068        296 YFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEG  375 (710)
Q Consensus       296 ~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~  375 (710)
                      .|.||||+|+..+....                                              +++++|++ |++++.++
T Consensus       207 ~G~TpLH~Aa~~~~~~~----------------------------------------------~iv~lLl~-gadin~~d  239 (446)
T PHA02946        207 DGNTPLHIVCSKTVKNV----------------------------------------------DIINLLLP-STDVNKQN  239 (446)
T ss_pred             CCCCHHHHHHHcCCCcH----------------------------------------------HHHHHHHc-CCCCCCCC
Confidence            77777777777653322                                              33444442 56777777


Q ss_pred             CCCCcHHHHHHHcCC-HHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCCCCCC
Q psy15068        376 DDMITPLLFAAKHCD-LQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDT  454 (710)
Q Consensus       376 ~~~~t~L~~A~~~~~-~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~  454 (710)
                      ..|.||||+|+..++ .++++.|+++|++.+                  ++ +++.|+.. +..++++.+.++|.+    
T Consensus       240 ~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~------------------~~-~~~~a~~~-~~~~~~e~l~~~g~~----  295 (446)
T PHA02946        240 KFGDSPLTLLIKTLSPAHLINKLLSTSNVIT------------------DQ-TVNICIFY-DRDDVLEIINDKGKQ----  295 (446)
T ss_pred             CCCCCHHHHHHHhCChHHHHHHHHhCCCCCC------------------Cc-HHHHHHHc-CchHHHHHHHHcCcc----
Confidence            788888888887776 477888888876654                  33 36777777 777888888777642    


Q ss_pred             CCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHH
Q psy15068        455 SNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEV  534 (710)
Q Consensus       455 ~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  534 (710)
                         .|.||||+|+.+|+.+++++|+++|+                                                   
T Consensus       296 ---~~~TpLh~Aa~~g~~eivk~Ll~~~~---------------------------------------------------  321 (446)
T PHA02946        296 ---YDSTDFKMAVEVGSIRCVKYLLDNDI---------------------------------------------------  321 (446)
T ss_pred             ---cCCCHHHHHHHcCCHHHHHHHHHCCC---------------------------------------------------
Confidence               35688888888888888888877542                                                   


Q ss_pred             HHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCC
Q psy15068        535 KKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGA  609 (710)
Q Consensus       535 ~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~  609 (710)
                                     .|+||||+|+..++.+++++|+.+|+++|.. ..|.||||+|++. ++.++++.|+.+..
T Consensus       322 ---------------~~~t~L~~A~~~~~~~~v~~Ll~~ga~~n~~-~~G~t~l~~a~~~-~~~~~~~~ll~~~~  379 (446)
T PHA02946        322 ---------------ICEDAMYYAVLSEYETMVDYLLFNHFSVDSV-VNGHTCMSECVRL-NNPVILSKLMLHNP  379 (446)
T ss_pred             ---------------ccccHHHHHHHhCHHHHHHHHHHCCCCCCCc-cccccHHHHHHHc-CCHHHHHHHHhcCc
Confidence                           2357788888888888888888888888774 4688888888877 78888888877543

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=100.00  E-value=1.7e-48  Score=401.68  Aligned_cols=420  Identities=16%  Similarity=0.123  Sum_probs=257.7

Q ss_pred             hcCCHHHHHHHHhcC-CCCCccc-cCCCCcHHHHHHH--cCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCC--HHH
Q psy15068         65 WDNKIREVEFLLSTG-DHDVNEK-LQDGRTALYMAIL--QGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGN--KNI  138 (710)
Q Consensus        65 ~~g~~~~v~~Ll~~~-~~~~~~~-~~~g~t~L~~A~~--~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~--~~i  138 (710)
                      +.++.++|++|++.| + ++|.+ +..|.||||+|+.  +++.+++++|+++|++++.+|..|.||||+|+..|+  .++
T Consensus       151 ~~v~leiVk~LLe~G~A-DIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eI  229 (764)
T PHA02716        151 RGIDLDLIKYMVDVGIV-NLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASV  229 (764)
T ss_pred             cCCCHHHHHHHHHCCCC-CcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHH
Confidence            345666666666666 5 66665 6666666666543  245666666666666666666666666666666663  366


Q ss_pred             HHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhC
Q psy15068        139 VKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKC  218 (710)
Q Consensus       139 v~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~  218 (710)
                      |++|+++|++++.++..|.||||.|+..                                     +..++.++++.|++.
T Consensus       230 VklLLe~GADVN~kD~~G~TPLh~Ai~~-------------------------------------a~n~~~EIvkiLie~  272 (764)
T PHA02716        230 IKKIIELGGDMDMKCVNGMSPIMTYIIN-------------------------------------IDNINPEITNIYIES  272 (764)
T ss_pred             HHHHHHcCCCCCCCCCCCCCHHHHHHHh-------------------------------------hhccCHHHHHHHHHh
Confidence            6666666666666666666666655321                                     122344444444433


Q ss_pred             CCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHH--cCCHHHHHHHHHcCCCCCCCcCC
Q psy15068        219 KADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACH--VGNLQIVQMLVKRKFDINAQNRY  296 (710)
Q Consensus       219 g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~--~~~~~~v~~Ll~~g~~~~~~~~~  296 (710)
                      +..............+..|+..|+.++++ +|++.|++++..|..|+||||+|+.  .++.+++++|+++|++++.++..
T Consensus       273 ~d~n~~~~~~~~L~~~i~AA~~g~leiVk-lLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~  351 (764)
T PHA02716        273 LDGNKVKNIPMILHSYITLARNIDISVVY-SFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNI  351 (764)
T ss_pred             ccccccccchhhhHHHHHHHHcCCHHHHH-HHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCC
Confidence            21111000000000134477888888888 7777888888889999999998764  46789999999999999999999


Q ss_pred             CCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCcchhhhhhccCCcccccHHHHHHHHHHHHHHHhcCCCCCCCCC
Q psy15068        297 FLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGD  376 (710)
Q Consensus       297 ~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~  376 (710)
                      |.||||.|+.....    +..+ .     ...                        ......+++++|+++|++++.++.
T Consensus       352 G~TPLH~A~~~lav----~~~l-d-----~~~------------------------~~~~~~eVVklLL~~GADIn~kn~  397 (764)
T PHA02716        352 GNTVLHTYLSMLSV----VNIL-D-----PET------------------------DNDIRLDVIQCLISLGADITAVNC  397 (764)
T ss_pred             CCCHHHHHHHhhhh----hccc-c-----ccc------------------------cccChHHHHHHHHHCCCCCCCcCC
Confidence            99999988653211    1000 0     000                        000112445555555555555555


Q ss_pred             CCCcHHHH----HHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCCCC
Q psy15068        377 DMITPLLF----AAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVN  452 (710)
Q Consensus       377 ~~~t~L~~----A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~  452 (710)
                      .|.||||.    |...+..+++++|++.|+......                              +.++.++..     
T Consensus       398 ~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~------------------------------~~~q~ll~~-----  442 (764)
T PHA02716        398 LGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKH------------------------------RILQDLLIR-----  442 (764)
T ss_pred             CCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhh------------------------------hhhhhhhhc-----
Confidence            55555552    112234455555554443211100                              011111111     


Q ss_pred             CCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchH
Q psy15068        453 DTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYD  532 (710)
Q Consensus       453 ~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  532 (710)
                         ......++|.++..+..++..++.+...-                                         ......+
T Consensus       443 ---~d~~~~~lhh~~a~~~~~~~~~~~~~~~~-----------------------------------------~~~~~~~  478 (764)
T PHA02716        443 ---VDDTPCIIHHIIAKYNIPTDLYTDEYEPY-----------------------------------------DSTKIHD  478 (764)
T ss_pred             ---cCcchhhHHHHHHhcCcchhhhhhhhhhc-----------------------------------------cccccch
Confidence               01111225555555554443333221100                                         0012223


Q ss_pred             HHHHHHhcCCcccccCCCCCcHHHHHHHcCCH-----HHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCch-----HHHH
Q psy15068        533 EVKKNIEDGACVNVSSERRGSALIYVAWKGYE-----EIVDLLLDNGADVNFKSATGFTALHMACRFHSND-----NIVR  602 (710)
Q Consensus       533 ~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~-----~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-----~~v~  602 (710)
                      ++..++..+.+++..+..|+||||+|+..|+.     +++++|++.|+|+|.+|..|+||||+|+++ |+.     ++|+
T Consensus       479 v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~~G~TPLh~A~~~-g~~~~~~~eIvk  557 (764)
T PHA02716        479 VYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIPTKNGVTPLMLTMRN-NRLSGHQWYIVK  557 (764)
T ss_pred             hhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCcccCCCCCCHHHHHHHc-CCccccHHHHHH
Confidence            44455556677889999999999999999876     556999999999999999999999999998 765     9999


Q ss_pred             HHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhc
Q psy15068        603 KLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNL  644 (710)
Q Consensus       603 ~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~  644 (710)
                      .|+++|++++...       |++|...++.+++.+|.++++.
T Consensus       558 ~LL~~ga~~~~~~-------l~~~~~~~~~~~~~ll~~~~~~  592 (764)
T PHA02716        558 NILDKRPNVDIVI-------IFLDKCYANGKFPSLLLSEDDI  592 (764)
T ss_pred             HHHhcCCCcchHH-------HHHHhhhhhhHHHHHHHHcchh
Confidence            9999999887664       8999999999999999988764

>PHA02946 ankyin-like protein; Provisional

Probab=100.00  E-value=1.4e-47  Score=386.06  Aligned_cols=358  Identities=20%  Similarity=0.196  Sum_probs=311.8

Q ss_pred             cchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHH--hcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCc
Q psy15068         25 HHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAV--WDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGL  102 (710)
Q Consensus        25 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~--~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~  102 (710)
                      -+++.+...++.+.++.+++.....     .+.++||.++  ..++.++|++|+++|+ ++|.+|..|+||||+|++.|+
T Consensus        11 ~sl~~~~~~~n~~~~~~~l~~~~~~-----g~~~~Lh~~~~~~~~~~~iv~~Ll~~Ga-dvn~~d~~G~TpLh~Aa~~g~   84 (446)
T PHA02946         11 LSLYAKYNSKNLDVFRNMLQAIEPS-----GNYHILHAYCGIKGLDERFVEELLHRGY-SPNETDDDGNYPLHIASKINN   84 (446)
T ss_pred             HHHHHHHccCcHHHHHHHHhccCCC-----CCChHHHHHHHhcCCCHHHHHHHHHCcC-CCCccCCCCCCHHHHHHHcCC
Confidence            4567888889999999999753221     2368999876  4457899999999999 999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcC--CHHHHHHHHhCCCCccc-cccCCCchhHHhhhccCCCCCCHHHHHH
Q psy15068        103 YKMVTLLIHHGANVNDRDEKGYTPLHLACYLG--NKNIVKFLLSKKADVRA-KCSMMVTPILAVSANMSEDSTDTNEIIS  179 (710)
Q Consensus       103 ~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g--~~~iv~~Ll~~g~~~~~-~~~~~~~~l~~a~~~~~~~~~~~~~~~~  179 (710)
                      .+++++|+++|++++.+|..|.||||+|+..+  ..+++++|+++|++++. .+..|.|||+ |+..+      +.++++
T Consensus        85 ~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~------~~~vv~  157 (446)
T PHA02946         85 NRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDP------SERVFK  157 (446)
T ss_pred             HHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCC------ChHHHH
Confidence            99999999999999999999999999999876  48999999999999985 6889999997 55667      889999


Q ss_pred             HHHHcCCCcccCCCCCCCCHHHHHHHhC--CHHHHHHHHhCCCCcchhhccCCChhHHHHHhcC--cHHHHHHHHccCCC
Q psy15068        180 MLIENGANVREKMPFTDFSPLHFAVVKK--NLSVVELLIKCKADTNLIVKVNQEPLLFFAIESN--SVKIVEAFLNSKNF  255 (710)
Q Consensus       180 ~Ll~~~~~~~~~~~~~~~~~l~~A~~~~--~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~--~~~~v~~lL~~~~~  255 (710)
                      +|++.|++++..+. .|.||||.|+..+  +.+++++|++.|++++..+..|.+| ||+|+..+  +.++++ +|.. ++
T Consensus       158 ~Ll~~gad~~~~d~-~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~Tp-LH~Aa~~~~~~~~iv~-lLl~-ga  233 (446)
T PHA02946        158 KIMSIGFEARIVDK-FGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTP-LHIVCSKTVKNVDIIN-LLLP-ST  233 (446)
T ss_pred             HHHhccccccccCC-CCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCH-HHHHHHcCCCcHHHHH-HHHc-CC
Confidence            99999999999988 9999999998765  4689999999999999999999999 99999876  889999 6654 89


Q ss_pred             ccccCCCCCCcHHHHHHHcCC-HHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCc
Q psy15068        256 DVSISDGDLNSLLHKACHVGN-LQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPN  334 (710)
Q Consensus       256 ~~~~~~~~~~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~  334 (710)
                      +++..+..|.||||+|+..++ .+++++|+++|++.+     ++ +++.++..+..  ++++                  
T Consensus       234 din~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~-----~~-~~~~a~~~~~~--~~~e------------------  287 (446)
T PHA02946        234 DVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVIT-----DQ-TVNICIFYDRD--DVLE------------------  287 (446)
T ss_pred             CCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCC-----Cc-HHHHHHHcCch--HHHH------------------
Confidence            999999999999999999988 589999999987654     22 37888877766  4444                  


Q ss_pred             chhhhhhccCCcccccHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhh
Q psy15068        335 LLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFI  414 (710)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~  414 (710)
                                                  .+..+|.      ..|.||||+|+..|+.+++++|+++|++           
T Consensus       288 ----------------------------~l~~~g~------~~~~TpLh~Aa~~g~~eivk~Ll~~~~~-----------  322 (446)
T PHA02946        288 ----------------------------IINDKGK------QYDSTDFKMAVEVGSIRCVKYLLDNDII-----------  322 (446)
T ss_pred             ----------------------------HHHHcCc------ccCCCHHHHHHHcCCHHHHHHHHHCCCc-----------
Confidence                                        4444442      2467999999999999999999998752           


Q ss_pred             hccccCccccCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcC
Q psy15068        415 SDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYG  482 (710)
Q Consensus       415 ~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~  482 (710)
                               +.||||+|+.. ++.+++++|+.+|++++..  ..|.|||++|++.++.++++.|+.+.
T Consensus       323 ---------~~t~L~~A~~~-~~~~~v~~Ll~~ga~~n~~--~~G~t~l~~a~~~~~~~~~~~ll~~~  378 (446)
T PHA02946        323 ---------CEDAMYYAVLS-EYETMVDYLLFNHFSVDSV--VNGHTCMSECVRLNNPVILSKLMLHN  378 (446)
T ss_pred             ---------cccHHHHHHHh-CHHHHHHHHHHCCCCCCCc--cccccHHHHHHHcCCHHHHHHHHhcC
Confidence                     78999999999 9999999999999999985  47999999999999999999999966

>PHA02730 ankyrin-like protein; Provisional

Probab=100.00  E-value=6.6e-47  Score=381.69  Aligned_cols=407  Identities=15%  Similarity=0.156  Sum_probs=316.9

Q ss_pred             ccccccccchhhhhhcC---hhhHHHHHHhhhccCCCccccchhHHHHHHhcC--CHHHHHHHHhcCC-CCCccccCCCC
Q psy15068         18 KESSYRHHHLFSEIMFS---EEDAFGYFLQGIINSSSAKSVELTLLCSAVWDN--KIREVEFLLSTGD-HDVNEKLQDGR   91 (710)
Q Consensus        18 ~~~~~~~~~l~~a~~~~---~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g--~~~~v~~Ll~~~~-~~~~~~~~~g~   91 (710)
                      .....+.||||+|+..|   +.+++++|+++|++++.+|..|.||||.|+..+  +.|+|++|++.|+ .+++..+..+.
T Consensus        36 ~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d  115 (672)
T PHA02730         36 HIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNIND  115 (672)
T ss_pred             hcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCC
Confidence            34456899999999997   599999999999999999999999999999977  7999999999965 15577777799


Q ss_pred             cHHHHHHH--cCcHHHHHHHHH-cCCCCCCCCC-----CCCCHHHHHHhcCCHHHHHHHHhCCCCcc-------ccccCC
Q psy15068         92 TALYMAIL--QGLYKMVTLLIH-HGANVNDRDE-----KGYTPLHLACYLGNKNIVKFLLSKKADVR-------AKCSMM  156 (710)
Q Consensus        92 t~L~~A~~--~g~~~~v~~Ll~-~g~~~~~~~~-----~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~-------~~~~~~  156 (710)
                      +||+.++.  +++.+++++|++ .+++++....     .|.+|+++|...++.+||++|+++|++++       ..+...
T Consensus       116 ~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~  195 (672)
T PHA02730        116 FDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDR  195 (672)
T ss_pred             chHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccccccCCc
Confidence            99999998  899999999996 6788876643     78999999999999999999999999996       255667


Q ss_pred             CchhHH-hhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHH--HHHhCCHHHHHHHHhCCCCcchhhccCCCh-
Q psy15068        157 VTPILA-VSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHF--AVVKKNLSVVELLIKCKADTNLIVKVNQEP-  232 (710)
Q Consensus       157 ~~~l~~-a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~--A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~-  232 (710)
                      ++|+.+ .......+.....+++++|+++|++++.++. .|.||||+  +...++.|++++|++.-.+....++....- 
T Consensus       196 c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~-~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~  274 (672)
T PHA02730        196 CKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDE-GGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYI  274 (672)
T ss_pred             cchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhh
Confidence            788888 4444444555699999999999999999999 99999995  556678999999998332222111111000 


Q ss_pred             --hHHH----HHh----cCcHHHHHHHHccCCCc--cc----cCCCCCCc---------------------HHHHHHHcC
Q psy15068        233 --LLFF----AIE----SNSVKIVEAFLNSKNFD--VS----ISDGDLNS---------------------LLHKACHVG  275 (710)
Q Consensus       233 --~l~~----A~~----~~~~~~v~~lL~~~~~~--~~----~~~~~~~t---------------------~L~~A~~~~  275 (710)
                        .|+-    --+    .-..++|+.+|...+.-  +-    ..+..|.+                     .|+.=.+.+
T Consensus       275 ~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~  354 (672)
T PHA02730        275 RGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYG  354 (672)
T ss_pred             hhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcC
Confidence              0100    000    11345667444433221  11    12333322                     555555544


Q ss_pred             ---CHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCC--CcHHHHHHHhhcccccCCCCCCCCcchhhhhhccCCccccc
Q psy15068        276 ---NLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGR--KHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMS  350 (710)
Q Consensus       276 ---~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~--~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (710)
                         +.+++++|+++|++++.. ..|.||||+|+..+.  .+.                                      
T Consensus       355 ~~v~ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~--------------------------------------  395 (672)
T PHA02730        355 DMVSIPILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDV--------------------------------------  395 (672)
T ss_pred             CcCcHHHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchH--------------------------------------
Confidence               699999999999999985 789999999988774  212                                      


Q ss_pred             HHHHHHHHHHHHHHHhcCC--CCCCCCCCCCcHHHH---HHHcC---------CHHHHHHHHHcCCCCCchhhhhhhhhc
Q psy15068        351 QTQIKRLDQIIKRIIDRTE--NINAEGDDMITPLLF---AAKHC---------DLQSAKYLIQKGANVNLTETQKAFISD  416 (710)
Q Consensus       351 ~~~~~~~~~~~~~ll~~~~--~~~~~~~~~~t~L~~---A~~~~---------~~~~~~~Ll~~g~~~~~~~~~~~~~~~  416 (710)
                              +++++|+++|+  +++.++..|.||||.   |...+         ..+++++|+++|++++..+..      
T Consensus       396 --------eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~------  461 (672)
T PHA02730        396 --------NVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDIDMIDNE------  461 (672)
T ss_pred             --------HHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccchhccCCC------
Confidence                    55556666776  688899999999984   33222         235799999999999998888      


Q ss_pred             cccCccccCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCCC-CCCCHHHHHHHc--CCHhHHHHHHHcCCCCCc
Q psy15068        417 ARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNK-PKQKPLAVAIQS--GDFQIVKELQNYGAQIDK  487 (710)
Q Consensus       417 ~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~~-~~~t~L~~A~~~--~~~~~v~~Ll~~~~~~~~  487 (710)
                             |.||||+|+.. ++.+++++|+++|++++.. +. .|.|||+.|+..  ++.++++.|+++|+++..
T Consensus       462 -------G~TPLh~Aa~~-~~~eive~LI~~GAdIN~~-d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i~~  526 (672)
T PHA02730        462 -------NKTLLYYAVDV-NNIQFARRLLEYGASVNTT-SRSIINTAIQKSSYRRENKTKLVDLLLSYHPTLET  526 (672)
T ss_pred             -------CCCHHHHHHHh-CCHHHHHHHHHCCCCCCCC-CCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCCHHH
Confidence                   99999999999 9999999999999999988 64 699999999974  789999999999987754

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=100.00  E-value=5.8e-46  Score=383.05  Aligned_cols=391  Identities=16%  Similarity=0.137  Sum_probs=312.4

Q ss_pred             hcChhhHHHHHHhhh-ccCCCc-cccchhHHHHHHh--cCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCc--HHH
Q psy15068         32 MFSEEDAFGYFLQGI-INSSSA-KSVELTLLCSAVW--DNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGL--YKM  105 (710)
Q Consensus        32 ~~~~~~~~~~ll~~~-~~~~~~-~~~~~t~L~~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~--~~~  105 (710)
                      ..+..+++++|++.| +++|.+ +..|.||||.|+.  .++.++|++|+++|+ +++.+|..|+||||+|++.|+  .++
T Consensus       151 ~~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GA-DVN~kD~~G~TPLH~Aa~~g~~~~eI  229 (764)
T PHA02716        151 RGIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGV-NVNLQNNHLITPLHTYLITGNVCASV  229 (764)
T ss_pred             cCCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCC-CCCCCCCCCCCHHHHHHHcCCCCHHH
Confidence            358999999999999 999998 8999999999864  467999999999999 999999999999999999995  599


Q ss_pred             HHHHHHcCCCCCCCCCCCCCHHHHHH---hcCCHHHHHHHHhCCCCccccccCCCchhH---HhhhccCCCCCCHHHHHH
Q psy15068        106 VTLLIHHGANVNDRDEKGYTPLHLAC---YLGNKNIVKFLLSKKADVRAKCSMMVTPIL---AVSANMSEDSTDTNEIIS  179 (710)
Q Consensus       106 v~~Ll~~g~~~~~~~~~~~t~L~~A~---~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~---~a~~~~~~~~~~~~~~~~  179 (710)
                      |++|++.|++++.+|..|.||||+|+   .+++.++++.|++.+......  ....+++   .|+..+      +.++++
T Consensus       230 VklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~--~~~~~L~~~i~AA~~g------~leiVk  301 (764)
T PHA02716        230 IKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVK--NIPMILHSYITLARNI------DISVVY  301 (764)
T ss_pred             HHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccc--cchhhhHHHHHHHHcC------CHHHHH
Confidence            99999999999999999999999986   568999999999875332211  1112333   367777      999999


Q ss_pred             HHHHcCCCcccCCCCCCCCHHHHHHH--hCCHHHHHHHHhCCCCcchhhccCCChhHHHHHh--------------cCcH
Q psy15068        180 MLIENGANVREKMPFTDFSPLHFAVV--KKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIE--------------SNSV  243 (710)
Q Consensus       180 ~Ll~~~~~~~~~~~~~~~~~l~~A~~--~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~--------------~~~~  243 (710)
                      +|+++|++++.++. .|.||||.|+.  .++.+++++|++.|++++..+..|.+| ||.|+.              .++.
T Consensus       302 lLLe~GAdIN~kD~-~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TP-LH~A~~~lav~~~ld~~~~~~~~~  379 (764)
T PHA02716        302 SFLQPGVKLHYKDS-AGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTV-LHTYLSMLSVVNILDPETDNDIRL  379 (764)
T ss_pred             HHHhCCCceeccCC-CCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCH-HHHHHHhhhhhccccccccccChH
Confidence            99999999998887 99999998764  457899999999999999999999998 998764              3688


Q ss_pred             HHHHHHHccCCCccccCCCCCCcHHHH----HHHcCCHHHHHHHHHcCCCCCCCcC--------CCCCh--HHHHHHhCC
Q psy15068        244 KIVEAFLNSKNFDVSISDGDLNSLLHK----ACHVGNLQIVQMLVKRKFDINAQNR--------YFLPP--MFFAIGMGR  309 (710)
Q Consensus       244 ~~v~~lL~~~~~~~~~~~~~~~t~L~~----A~~~~~~~~v~~Ll~~g~~~~~~~~--------~~~t~--l~~a~~~~~  309 (710)
                      ++++ +|.+.|++++..+..|.||||.    |...++.+++++|++.|+.....+.        .+.+|  ++.++..+.
T Consensus       380 eVVk-lLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~  458 (764)
T PHA02716        380 DVIQ-CLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYN  458 (764)
T ss_pred             HHHH-HHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcC
Confidence            9999 8888999999999999999983    2335778999999998764322211        12222  445554444


Q ss_pred             CcHHHHHHHhhcccccCCCCCCCCcchhhhhhccCCcccccHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC
Q psy15068        310 KHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHC  389 (710)
Q Consensus       310 ~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~  389 (710)
                      .  ++..++.......                            ......+...++..+.+++..+..|+||||+|+..|
T Consensus       459 ~--~~~~~~~~~~~~~----------------------------~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g  508 (764)
T PHA02716        459 I--PTDLYTDEYEPYD----------------------------STKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISH  508 (764)
T ss_pred             c--chhhhhhhhhhcc----------------------------ccccchhhHHHHHhhccccccCCCCCCHHHHHHHcC
Confidence            4  3333322211000                            001114445555567788999999999999999998


Q ss_pred             CH-----HHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcH-----HHHHHHHHCCCCCCCCCCCCC
Q psy15068        390 DL-----QSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNI-----EMVKLLLLHGADVNDTSNKPK  459 (710)
Q Consensus       390 ~~-----~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~-----~~~~~Ll~~~~~~~~~~~~~~  459 (710)
                      +.     +.+++|++.|++++..+..             |.||||+|+.+ ++.     ++++.|+++|++++..     
T Consensus       509 ~~~~v~~e~~k~LL~~GADIN~~d~~-------------G~TPLh~A~~~-g~~~~~~~eIvk~LL~~ga~~~~~-----  569 (764)
T PHA02716        509 TNANIVMDSFVYLLSIQYNINIPTKN-------------GVTPLMLTMRN-NRLSGHQWYIVKNILDKRPNVDIV-----  569 (764)
T ss_pred             CccchhHHHHHHHHhCCCCCcccCCC-------------CCCHHHHHHHc-CCccccHHHHHHHHHhcCCCcchH-----
Confidence            76     5569999999999998888             99999999998 765     9999999999998755     


Q ss_pred             CCHHHHHHHcCCHhHHHHHHHcCCCC
Q psy15068        460 QKPLAVAIQSGDFQIVKELQNYGAQI  485 (710)
Q Consensus       460 ~t~L~~A~~~~~~~~v~~Ll~~~~~~  485 (710)
                        .++.|...++.+++..|..+++.+
T Consensus       570 --~l~~~~~~~~~~~~~ll~~~~~~~  593 (764)
T PHA02716        570 --IIFLDKCYANGKFPSLLLSEDDII  593 (764)
T ss_pred             --HHHHHhhhhhhHHHHHHHHcchhH
Confidence              489999999999999999988654

>KOG0510|consensus

Probab=100.00  E-value=4.4e-47  Score=371.84  Aligned_cols=363  Identities=25%  Similarity=0.296  Sum_probs=320.4

Q ss_pred             HHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q psy15068        209 LSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKF  288 (710)
Q Consensus       209 ~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~  288 (710)
                      .+...++++....+......+.++ +|.++..++.       .+.-......|..+.||||+|+.....+.++.|++.|+
T Consensus        41 dD~~tli~~kns~~~~~~~~gd~~-~~~~~~~~y~-------~~~~~~~~a~D~~~n~~l~~a~~~~~~~~i~~Lls~ga  112 (929)
T KOG0510|consen   41 DDRHTLILEKNSSTPGKRAFGDTE-LHHASARNYI-------LSKLAISYAKDSADNTPLHAAVEYNQGDKIQVLLSYGA  112 (929)
T ss_pred             HHHHHHHHHhccccchhhhhchhH-HHHHHhhcch-------hhhhhhhhhhhcccCchhHHHhhcchHHHHHHHHhcCC
Confidence            367788888888888888888888 8888887754       22233456678888999999999999999999999999


Q ss_pred             CCCCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCcchhhhhhccCCcccccHHHHHHHHHHHHHHHhcC
Q psy15068        289 DINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRT  368 (710)
Q Consensus       289 ~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  368 (710)
                      ++...+.++.+|+|+|...++.                                                +.++.|+++|
T Consensus       113 d~~~~n~~~~aplh~A~~~~~~------------------------------------------------s~L~~Ll~~~  144 (929)
T KOG0510|consen  113 DTPLRNLNKNAPLHLAADSGNY------------------------------------------------SCLKLLLDYG  144 (929)
T ss_pred             CCChhhhhccCchhhccccchH------------------------------------------------HHHHHHHHhc
Confidence            9999999999999999999887                                                7778888899


Q ss_pred             CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHH--
Q psy15068        369 ENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLL--  446 (710)
Q Consensus       369 ~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~--  446 (710)
                      +++|..+..+.||||.|+..++.|..+.|++.|+++...+..             |.+|+|.|++. ++.++.+.++.  
T Consensus       145 ~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~-------------~~~~iH~aa~s-~s~e~mEi~l~~~  210 (929)
T KOG0510|consen  145 ADVNLEDENGFTPLHLAARKNKVEAKKELINKGADPCKSDID-------------GNFPIHEAARS-GSKECMEIFLPEH  210 (929)
T ss_pred             CCccccccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCc-------------CCchHHHHHHh-cchhhhhhhhccc
Confidence            999999999999999999999999889999999999888777             99999999999 99999999998  


Q ss_pred             ---CCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHH
Q psy15068        447 ---HGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFL  523 (710)
Q Consensus       447 ---~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~  523 (710)
                         .+..++.- +..+.||||.|+..|+.++++..++.|.......  .+                              
T Consensus       211 g~~r~~~in~~-~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~--~~------------------------------  257 (929)
T KOG0510|consen  211 GYERQTHINFD-NNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQ--LD------------------------------  257 (929)
T ss_pred             cchhhcccccc-cCCCCcchhhhhhcCCHHHHHHHHhCccccchhh--hH------------------------------
Confidence               66777777 8899999999999999999999999987654322  00                              


Q ss_pred             HhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHH
Q psy15068        524 KNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRK  603 (710)
Q Consensus       524 ~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~  603 (710)
                            .....+.|      +|..|.+|.||||+|++.|+.++++.|+..|++++.++.++.||||.|+.+ |+...|+.
T Consensus       258 ------~~~q~kel------v~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~y-g~~ntv~r  324 (929)
T KOG0510|consen  258 ------AMQQEKEL------VNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIY-GRINTVER  324 (929)
T ss_pred             ------HHHHHHHH------hhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHc-ccHHHHHH
Confidence                  01111222      567899999999999999999999999999999999999999999999999 99999999


Q ss_pred             HHH-cCC-CCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccc---cCCCCCCCchhhHHHHhhh---cccccceeeh
Q psy15068        604 LLH-HGA-YYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFA---SVTNPYDPNVYHRIELMNS---AKQLGLVHVF  675 (710)
Q Consensus       604 Ll~-~g~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~  675 (710)
                      ||+ .|. ..+..| -.|+||||+|+.+|+..++++|+.+|++.+   ..|++|+||| |.|++.|+   |+.| +.+||
T Consensus       325 LL~~~~~rllne~D-~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaL-H~Aa~~g~~~av~~L-i~~Ga  401 (929)
T KOG0510|consen  325 LLQESDTRLLNESD-LHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTAL-HLAAKYGNTSAVQKL-ISHGA  401 (929)
T ss_pred             HHhCcCcccccccc-ccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhh-hHHHHhccHHHHHHH-HHcCC
Confidence            998 543 466666 999999999999999999999999999887   5699999999 99999999   9999 99999


Q ss_pred             hHHHHhhhcccchhHHH
Q psy15068        676 EIMKVVKNYAGETLIGV  692 (710)
Q Consensus       676 ~~~~~~~~~~G~t~l~~  692 (710)
                      ++  ..+|+.|.|++++
T Consensus       402 ~I--~~~n~~g~SA~~~  416 (929)
T KOG0510|consen  402 DI--GVKNKKGKSAFDT  416 (929)
T ss_pred             ce--eeccccccccccc
Confidence            99  9999999999995

>KOG0510|consensus

Probab=100.00  E-value=1.5e-45  Score=361.11  Aligned_cols=458  Identities=22%  Similarity=0.241  Sum_probs=331.8

Q ss_pred             hcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHH
Q psy15068         32 MFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIH  111 (710)
Q Consensus        32 ~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~  111 (710)
                      .++..+.-..++....++.....+-.++++.+...   |..+.+++... .+..++..|.|++|.|+..+..      ++
T Consensus         7 ~~~~~~~qea~~~~~~~~~~~~~d~~~~~~~~~~d---D~~tli~~kns-~~~~~~~~gd~~~~~~~~~~y~------~~   76 (929)
T KOG0510|consen    7 EFNDPQAQEALLLAKQDIRQPVADLDSQALADTLD---DRHTLILEKNS-STPGKRAFGDTELHHASARNYI------LS   76 (929)
T ss_pred             CCCCcHHHHHhhhhhhhhhhhhHHHhHHHHHhhHH---HHHHHHHHhcc-ccchhhhhchhHHHHHHhhcch------hh
Confidence            34444444444444444444444444555555444   66666666666 6666667777777777776654      23


Q ss_pred             cCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccC
Q psy15068        112 HGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREK  191 (710)
Q Consensus       112 ~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~  191 (710)
                      .-+.....|..++||||+|+.....+.|++|++.|++....+..+.+|+|+|+..+      ..++++.|+++|++++..
T Consensus        77 ~~~~~~a~D~~~n~~l~~a~~~~~~~~i~~Lls~gad~~~~n~~~~aplh~A~~~~------~~s~L~~Ll~~~~dvnl~  150 (929)
T KOG0510|consen   77 KLAISYAKDSADNTPLHAAVEYNQGDKIQVLLSYGADTPLRNLNKNAPLHLAADSG------NYSCLKLLLDYGADVNLE  150 (929)
T ss_pred             hhhhhhhhhcccCchhHHHhhcchHHHHHHHHhcCCCCChhhhhccCchhhccccc------hHHHHHHHHHhcCCcccc
Confidence            33344556677777777777777777777777777777777777777777777777      777777777777777777


Q ss_pred             CCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHcc----CCCccccCCCCCCcH
Q psy15068        192 MPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNS----KNFDVSISDGDLNSL  267 (710)
Q Consensus       192 ~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~----~~~~~~~~~~~~~t~  267 (710)
                      +. .+.||||.|+..++.|..+.|++.|+++...+..+..| +|.|+++|..+.++.++.+    ++..++..+..+.||
T Consensus       151 de-~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~-iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~p  228 (929)
T KOG0510|consen  151 DE-NGFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFP-IHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATP  228 (929)
T ss_pred             cc-CCCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCch-HHHHHHhcchhhhhhhhccccchhhcccccccCCCCcc
Confidence            77 77777777777777777777777777777777777777 7888888888777744443    455688888999999


Q ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCcchhhhhhccCCcc
Q psy15068        268 LHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPK  347 (710)
Q Consensus       268 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (710)
                      ||.|+..|+.++++.+++.|........+       +        .                                  
T Consensus       229 LhlAve~g~~e~lk~~L~n~~~~a~~~~~-------~--------~----------------------------------  259 (929)
T KOG0510|consen  229 LHLAVEGGDIEMLKMCLQNGKKIADVQLD-------A--------M----------------------------------  259 (929)
T ss_pred             hhhhhhcCCHHHHHHHHhCccccchhhhH-------H--------H----------------------------------
Confidence            99999999999999999987544321110       0        0                                  


Q ss_pred             cccHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCH
Q psy15068        348 VMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSA  427 (710)
Q Consensus       348 ~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~  427 (710)
                                 ...+.|      ++..|.+|.||||+|++.|..+.++.|+..|++++....+             +.||
T Consensus       260 -----------~q~kel------v~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d-------------~~sp  309 (929)
T KOG0510|consen  260 -----------QQEKEL------VNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKD-------------EESP  309 (929)
T ss_pred             -----------HHHHHH------hhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCC-------------CCCc
Confidence                       111111      4578889999999999999999999999999999998888             8999


Q ss_pred             HHHHHHccCcHHHHHHHHH-CCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhH
Q psy15068        428 LQYACKHKNNIEMVKLLLL-HGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTEL  506 (710)
Q Consensus       428 l~~A~~~~~~~~~~~~Ll~-~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~  506 (710)
                      ||.|+.+ |+.+.++-|++ .+...-...+..|.||||.|+++|+.++++.|+++|+.....                  
T Consensus       310 LH~AA~y-g~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~------------------  370 (929)
T KOG0510|consen  310 LHFAAIY-GRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNM------------------  370 (929)
T ss_pred             hHHHHHc-ccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcc------------------
Confidence            9999999 99999999999 554443334889999999999999999999999999764310                  


Q ss_pred             HHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCc
Q psy15068        507 EERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT  586 (710)
Q Consensus       507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t  586 (710)
                                                            ...|.+|.||||.|+..|+..+|++|+.+|+++..+|+.|.+
T Consensus       371 --------------------------------------~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~~g~S  412 (929)
T KOG0510|consen  371 --------------------------------------SEADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKNKKGKS  412 (929)
T ss_pred             --------------------------------------cccccCCchhhhHHHHhccHHHHHHHHHcCCceeeccccccc
Confidence                                                  023789999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhh
Q psy15068        587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYH  658 (710)
Q Consensus       587 ~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~  658 (710)
                      ++++--..     +..... +      +. ....+|++--.. --++.++..+.+.......+.++.||+ .
T Consensus       413 A~~~~~~~-----~~p~~~-~------~~-~~n~c~~~~~i~-~~pe~~e~vlD~c~l~~~e~~~~~~~~-Q  469 (929)
T KOG0510|consen  413 AFDTRPDR-----CLPVFV-H------RS-PFNKCPTTELIE-PLPECFEIVLDFCILKSQERKDSPTPL-Q  469 (929)
T ss_pred             cccccccc-----cccHHH-h------hC-CCCCcchhhhhc-cchHHHHHHHHHHHHHHhhccCCCChh-h
Confidence            99962111     111110 0      01 111244444333 336788888888777777777778888 5

>PHA02874 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2e-43  Score=361.31  Aligned_cols=329  Identities=26%  Similarity=0.343  Sum_probs=204.3

Q ss_pred             HHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHH
Q psy15068        234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTH  313 (710)
Q Consensus       234 l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~  313 (710)
                      |..|+..|+.+.++.++...+..++..+..|.|||+.|+..|+.++|++|+++|++++..+..|.|||+.|+..++.  +
T Consensus         5 l~~ai~~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~--~   82 (434)
T PHA02874          5 LRMCIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAH--D   82 (434)
T ss_pred             HHHHHhcCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH--H
Confidence            55555555555555444444444555555556666666666666666666666666665555566666666666555  4


Q ss_pred             HHHHHhhcccccCCCCCCCCcchhhhhhccCCcccccHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHH
Q psy15068        314 VAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQS  393 (710)
Q Consensus       314 ~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~  393 (710)
                      ++++|++. +.+....                      .......++++.+++.|++++.++..|.||||+|+..|+.++
T Consensus        83 iv~~Ll~~-g~~~~~~----------------------~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~  139 (434)
T PHA02874         83 IIKLLIDN-GVDTSIL----------------------PIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLES  139 (434)
T ss_pred             HHHHHHHC-CCCCCcc----------------------hhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHH
Confidence            44444441 1111000                      000001145555555666666666666666666666666666


Q ss_pred             HHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCCHh
Q psy15068        394 AKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQ  473 (710)
Q Consensus       394 ~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~  473 (710)
                      +++|++.|++++..+..             |.||||+|+.. ++.+++++|+++|++++.. +..|.||||+|+..|+.+
T Consensus       140 v~~Ll~~gad~n~~d~~-------------g~tpLh~A~~~-~~~~iv~~Ll~~g~~~n~~-~~~g~tpL~~A~~~g~~~  204 (434)
T PHA02874        140 IKMLFEYGADVNIEDDN-------------GCYPIHIAIKH-NFFDIIKLLLEKGAYANVK-DNNGESPLHNAAEYGDYA  204 (434)
T ss_pred             HHHHHhCCCCCCCcCCC-------------CCCHHHHHHHC-CcHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcCCHH
Confidence            66666666666655544             66666666665 6666666666666666555 556666666666666666


Q ss_pred             HHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCc
Q psy15068        474 IVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGS  553 (710)
Q Consensus       474 ~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t  553 (710)
                      ++++|+++|++                                                           ++..+..|.|
T Consensus       205 iv~~Ll~~g~~-----------------------------------------------------------i~~~~~~g~T  225 (434)
T PHA02874        205 CIKLLIDHGNH-----------------------------------------------------------IMNKCKNGFT  225 (434)
T ss_pred             HHHHHHhCCCC-----------------------------------------------------------CcCCCCCCCC
Confidence            66666555544                                                           3344567788


Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCC-Ch
Q psy15068        554 ALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGK-NR  632 (710)
Q Consensus       554 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~-~~  632 (710)
                      |||.|+..+. +.+.+|+ .|++++.+|..|+||||+|+..+++.+++++|+++|++++.++ ..|.||||+|+..+ ..
T Consensus       226 pL~~A~~~~~-~~i~~Ll-~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~d-~~g~TpL~~A~~~~~~~  302 (434)
T PHA02874        226 PLHNAIIHNR-SAIELLI-NNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKD-NKGENPIDTAFKYINKD  302 (434)
T ss_pred             HHHHHHHCCh-HHHHHHH-cCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCCCCC-CCCCCHHHHHHHhCCcc
Confidence            8888887765 4566655 5788888888888888888876347788888888888888888 88888888888776 66


Q ss_pred             hHHHHHHhhhhccccCCCCC-CCchhhHHHHhhh
Q psy15068        633 DIIDLLHLIDNLFASVTNPY-DPNVYHRIELMNS  665 (710)
Q Consensus       633 ~~v~~Ll~~g~~~~~~~~~g-~t~L~~~A~~~~~  665 (710)
                      ++++.|++.++.++..+..+ .+++ ..+....+
T Consensus       303 ~~ik~ll~~~~~~~~~~~~~~~~~~-~~~~i~~~  335 (434)
T PHA02874        303 PVIKDIIANAVLIKEADKLKDSDFL-EHIEIKDN  335 (434)
T ss_pred             HHHHHHHHhcCchhhccccchhHHH-HHHHHhcc
Confidence            77888888887776666555 3445 55555444

>PHA02874 ankyrin repeat protein; Provisional

Probab=100.00  E-value=7.7e-43  Score=357.09  Aligned_cols=341  Identities=22%  Similarity=0.298  Sum_probs=294.3

Q ss_pred             hHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHH
Q psy15068         58 TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKN  137 (710)
Q Consensus        58 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~  137 (710)
                      ..|..|+..|+++.|+.|++.++..++..+..|.||||.|++.|+.++|++|++.|++++..+..|.||||+|+..|+.+
T Consensus         3 ~~l~~ai~~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~   82 (434)
T PHA02874          3 QDLRMCIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHD   82 (434)
T ss_pred             HHHHHHHhcCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence            46889999999999999998776468888889999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHh
Q psy15068        138 IVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIK  217 (710)
Q Consensus       138 iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~  217 (710)
                      ++++|+++|+++...          .....      ..++++.|++.|++++..+. .|.||||.|+..|+.+++++|++
T Consensus        83 iv~~Ll~~g~~~~~~----------~~~~~------~~~~i~~ll~~g~d~n~~~~-~g~T~Lh~A~~~~~~~~v~~Ll~  145 (434)
T PHA02874         83 IIKLLIDNGVDTSIL----------PIPCI------EKDMIKTILDCGIDVNIKDA-ELKTFLHYAIKKGDLESIKMLFE  145 (434)
T ss_pred             HHHHHHHCCCCCCcc----------hhccC------CHHHHHHHHHCcCCCCCCCC-CCccHHHHHHHCCCHHHHHHHHh
Confidence            999999999876432          12223      67899999999999998877 89999999999999999999999


Q ss_pred             CCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCC
Q psy15068        218 CKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYF  297 (710)
Q Consensus       218 ~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~  297 (710)
                      .|++++..+..+.+| ||+|+..++.++++ +|.+.|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|
T Consensus       146 ~gad~n~~d~~g~tp-Lh~A~~~~~~~iv~-~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g  223 (434)
T PHA02874        146 YGADVNIEDDNGCYP-IHIAIKHNFFDIIK-LLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNG  223 (434)
T ss_pred             CCCCCCCcCCCCCCH-HHHHHHCCcHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCC
Confidence            999999999888888 99999999999999 8888999999999999999999999999999999999999999999999


Q ss_pred             CChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCcchhhhhhccCCcccccHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q psy15068        298 LPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDD  377 (710)
Q Consensus       298 ~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~  377 (710)
                      .||||.|+..+.   +.+                                              .+|+ .|.+++.++..
T Consensus       224 ~TpL~~A~~~~~---~~i----------------------------------------------~~Ll-~~~~in~~d~~  253 (434)
T PHA02874        224 FTPLHNAIIHNR---SAI----------------------------------------------ELLI-NNASINDQDID  253 (434)
T ss_pred             CCHHHHHHHCCh---HHH----------------------------------------------HHHH-cCCCCCCcCCC
Confidence            999999997654   222                                              2333 46778889999


Q ss_pred             CCcHHHHHHHcC-CHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCC
Q psy15068        378 MITPLLFAAKHC-DLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSN  456 (710)
Q Consensus       378 ~~t~L~~A~~~~-~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~  456 (710)
                      |.||||+|+..+ +.+++++|+++|++++..+..             |.|||+.|+...+..++++.|+..+...+....
T Consensus       254 G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~d~~-------------g~TpL~~A~~~~~~~~~ik~ll~~~~~~~~~~~  320 (434)
T PHA02874        254 GSTPLHHAINPPCDIDIIDILLYHKADISIKDNK-------------GENPIDTAFKYINKDPVIKDIIANAVLIKEADK  320 (434)
T ss_pred             CCCHHHHHHhcCCcHHHHHHHHHCcCCCCCCCCC-------------CCCHHHHHHHhCCccHHHHHHHHhcCchhhccc
Confidence            999999999876 789999999999999988888             999999999883478899999999987766533


Q ss_pred             CCCCCHHHHHHHcCCHhHHHHHHH
Q psy15068        457 KPKQKPLAVAIQSGDFQIVKELQN  480 (710)
Q Consensus       457 ~~~~t~L~~A~~~~~~~~v~~Ll~  480 (710)
                      ....+++..+...++.++.+++.+
T Consensus       321 ~~~~~~~~~~~i~~~~~~~~~~~~  344 (434)
T PHA02874        321 LKDSDFLEHIEIKDNKEFSDFIKE  344 (434)
T ss_pred             cchhHHHHHHHHhccchHHHHHHH
Confidence            333556666666666666555544

>PHA03095 ankyrin-like protein; Provisional

Probab=100.00  E-value=4.6e-41  Score=350.90  Aligned_cols=283  Identities=23%  Similarity=0.233  Sum_probs=263.4

Q ss_pred             hhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcC---CHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcC-cH
Q psy15068         28 FSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDN---KIREVEFLLSTGDHDVNEKLQDGRTALYMAILQG-LY  103 (710)
Q Consensus        28 ~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g---~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g-~~  103 (710)
                      ..++..++.+++++|+++|++++..+..|.||||.|+..|   +.+++++|++.|+ +++.++..|+||||+|+..| +.
T Consensus        19 ~~~~~~~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Ga-din~~~~~g~TpLh~A~~~~~~~   97 (471)
T PHA03095         19 LLNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGA-DVNAPERCGFTPLHLYLYNATTL   97 (471)
T ss_pred             HHcCCCCCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCC-CCCCCCCCCCCHHHHHHHcCCcH
Confidence            5677889999999999999999999999999999999999   9999999999999 99999999999999999999 59


Q ss_pred             HHHHHHHHcCCCCCCCCCCCCCHHHHHH--hcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHH
Q psy15068        104 KMVTLLIHHGANVNDRDEKGYTPLHLAC--YLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISML  181 (710)
Q Consensus       104 ~~v~~Ll~~g~~~~~~~~~~~t~L~~A~--~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~L  181 (710)
                      +++++|++.|++++.+|..|.||||+|+  ..++.+++++|+++|++++..+..|.||||+++..+..    ..+++++|
T Consensus        98 ~iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~----~~~iv~~L  173 (471)
T PHA03095         98 DVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNA----NVELLRLL  173 (471)
T ss_pred             HHHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCC----CHHHHHHH
Confidence            9999999999999999999999999999  56789999999999999999999999999998876622    68999999


Q ss_pred             HHcCCCcccCCCCCCCCHHHHHHHh--CCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcH--HHHHHHHccCCCcc
Q psy15068        182 IENGANVREKMPFTDFSPLHFAVVK--KNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSV--KIVEAFLNSKNFDV  257 (710)
Q Consensus       182 l~~~~~~~~~~~~~~~~~l~~A~~~--~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~--~~v~~lL~~~~~~~  257 (710)
                      +++|++++..+. .|.||||.|+..  ++.++++.|++.|++++..+..|.+| ||.|+..++.  .+++ .|...|+++
T Consensus       174 l~~g~~~~~~d~-~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tp-Lh~Aa~~~~~~~~~v~-~ll~~g~di  250 (471)
T PHA03095        174 IDAGADVYAVDD-RFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTP-LHSMATGSSCKRSLVL-PLLIAGISI  250 (471)
T ss_pred             HHcCCCCcccCC-CCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCH-HHHHHhcCCchHHHHH-HHHHcCCCC
Confidence            999999988855 999999999875  78899999999999999999999998 9999999875  4666 777889999


Q ss_pred             ccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhh
Q psy15068        258 SISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQ  320 (710)
Q Consensus       258 ~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~  320 (710)
                      +..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..++.  +++++|++
T Consensus       251 n~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~--~~v~~LL~  311 (471)
T PHA03095        251 NARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNG--RAVRAALA  311 (471)
T ss_pred             CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCH--HHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999988  88888877

>PHA03095 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.4e-40  Score=347.22  Aligned_cols=290  Identities=27%  Similarity=0.362  Sum_probs=247.4

Q ss_pred             HHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcC---cHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcC-CH
Q psy15068         61 CSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQG---LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLG-NK  136 (710)
Q Consensus        61 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g---~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g-~~  136 (710)
                      ..|+..+++++|++|++.|+ +++.++..|.||||+|+..|   +.+++++|++.|++++.++..|.||||+|+..| +.
T Consensus        19 ~~~~~~~~~~~v~~Ll~~ga-~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~   97 (471)
T PHA03095         19 LLNASNVTVEEVRRLLAAGA-DVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTL   97 (471)
T ss_pred             HHcCCCCCHHHHHHHHHcCC-CcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcH
Confidence            55678899999999999999 99999999999999999999   999999999999999999999999999999999 59


Q ss_pred             HHHHHHHhCCCCccccccCCCchhHHhh--hccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhC--CHHHH
Q psy15068        137 NIVKFLLSKKADVRAKCSMMVTPILAVS--ANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKK--NLSVV  212 (710)
Q Consensus       137 ~iv~~Ll~~g~~~~~~~~~~~~~l~~a~--~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~--~~~~v  212 (710)
                      +++++|+++|++++.++..|.||||+|+  ..+      +.+++++|+++|++++..+. .|.||||.|+..+  +.+++
T Consensus        98 ~iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~------~~~iv~~Ll~~gad~~~~d~-~g~tpL~~a~~~~~~~~~iv  170 (471)
T PHA03095         98 DVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNI------NPKVIRLLLRKGADVNALDL-YGMTPLAVLLKSRNANVELL  170 (471)
T ss_pred             HHHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcC------CHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHcCCCCHHHH
Confidence            9999999999999999999999999999  444      78999999999999998887 8999999988866  67889


Q ss_pred             HHHHhCCCCcchhhccCCChhHHHHHhc--CcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCH--HHHHHHHHcCC
Q psy15068        213 ELLIKCKADTNLIVKVNQEPLLFFAIES--NSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNL--QIVQMLVKRKF  288 (710)
Q Consensus       213 ~~Ll~~g~~~~~~~~~~~~~~l~~A~~~--~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~--~~v~~Ll~~g~  288 (710)
                      ++|++.|++++..+..+.++ ||.|+..  ++.++++ +|.+.|++++..+..|.||||+|+..|+.  .+++.|++.|+
T Consensus       171 ~~Ll~~g~~~~~~d~~g~t~-Lh~~~~~~~~~~~i~~-~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~  248 (471)
T PHA03095        171 RLLIDAGADVYAVDDRFRSL-LHHHLQSFKPRARIVR-ELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGI  248 (471)
T ss_pred             HHHHHcCCCCcccCCCCCCH-HHHHHHHCCCcHHHHH-HHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCC
Confidence            99999998888776666766 8877754  6677777 77777888888888888888888887764  56777888888


Q ss_pred             CCCCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCcchhhhhhccCCcccccHHHHHHHHHHHHHHHhcC
Q psy15068        289 DINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRT  368 (710)
Q Consensus       289 ~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  368 (710)
                      +++..+..|.||||+|+..|+.                                                +++++|++.|
T Consensus       249 din~~d~~g~TpLh~A~~~~~~------------------------------------------------~~v~~LL~~g  280 (471)
T PHA03095        249 SINARNRYGQTPLHYAAVFNNP------------------------------------------------RACRRLIALG  280 (471)
T ss_pred             CCCCcCCCCCCHHHHHHHcCCH------------------------------------------------HHHHHHHHcC
Confidence            8888888888888888887776                                                5555556677


Q ss_pred             CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchh
Q psy15068        369 ENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTE  408 (710)
Q Consensus       369 ~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~  408 (710)
                      ++++.++..|.|||+.|+..|+.++++.|++.+++++...
T Consensus       281 ad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~~~~  320 (471)
T PHA03095        281 ADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAETVA  320 (471)
T ss_pred             CCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHHHHH
Confidence            8888888888888888888888888888888877765443

>KOG0508|consensus

Probab=100.00  E-value=5.4e-40  Score=301.57  Aligned_cols=213  Identities=25%  Similarity=0.310  Sum_probs=173.9

Q ss_pred             hhhhcChhhHHHHHHhhhc-----cCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccc--------cCCCCcHHH
Q psy15068         29 SEIMFSEEDAFGYFLQGII-----NSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEK--------LQDGRTALY   95 (710)
Q Consensus        29 ~a~~~~~~~~~~~ll~~~~-----~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~--------~~~g~t~L~   95 (710)
                      -|++.|.+..+..|+-+.-     +.-..+.+|.|||..|+++|+.++|++|+++...++...        .-.|-+||.
T Consensus        10 naa~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLW   89 (615)
T KOG0508|consen   10 NAARDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLW   89 (615)
T ss_pred             HHhhhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhh
Confidence            6777888877777775431     222345577899999999999999999998533244332        346778888


Q ss_pred             HHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHH
Q psy15068         96 MAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTN  175 (710)
Q Consensus        96 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~  175 (710)
                      .|+..|++++||.|+++|+++|.......|||-.||.-|+.++|+||+++|+|++..+..|.|.|++|+..|      +.
T Consensus        90 aAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykG------h~  163 (615)
T KOG0508|consen   90 AASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKG------HV  163 (615)
T ss_pred             HHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccC------ch
Confidence            888899999999999999999888888889999999999999999999999999999999999999999999      99


Q ss_pred             HHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHH
Q psy15068        176 EIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFL  250 (710)
Q Consensus       176 ~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL  250 (710)
                      +++++|++.|++++.+.. .|+|+||.++.+|+++++++|+.+|+.+. .+..|.+| |..|+..|+.++|++++
T Consensus       164 ~I~qyLle~gADvn~ks~-kGNTALH~caEsG~vdivq~Ll~~ga~i~-~d~~GmtP-L~~Aa~tG~~~iVe~L~  235 (615)
T KOG0508|consen  164 DIAQYLLEQGADVNAKSY-KGNTALHDCAESGSVDIVQLLLKHGAKID-VDGHGMTP-LLLAAVTGHTDIVERLL  235 (615)
T ss_pred             HHHHHHHHhCCCcchhcc-cCchHHHhhhhcccHHHHHHHHhCCceee-ecCCCCch-HHHHhhhcchHHHHHHh
Confidence            999999999999988887 88999999999999999999999988776 44557777 88888888888888444

>PHA03100 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.4e-40  Score=347.84  Aligned_cols=280  Identities=29%  Similarity=0.325  Sum_probs=266.3

Q ss_pred             HHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHH-----H
Q psy15068        357 LDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQY-----A  431 (710)
Q Consensus       357 ~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~-----A  431 (710)
                      ...+++++++.+...+..+..+.||||.|+..++.+++++|++.|++++..+..             +.||+|.     |
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~~-------------~~t~L~~~~~~~a   80 (480)
T PHA03100         14 KVKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKN-------------NSTPLHYLSNIKY   80 (480)
T ss_pred             HHHHHHHHHhcCccchhhhcccchhhhhhhccCCHHHHHHHHHcCCCCCCcccc-------------CcCHHHHHHHHHH
Confidence            347888888888777778889999999999999999999999999999987777             8999999     9


Q ss_pred             HHccCcHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH--HcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHH
Q psy15068        432 CKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAI--QSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEER  509 (710)
Q Consensus       432 ~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~--~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~  509 (710)
                      +.. ++.+++++|++.|++++.. +..|.||||+|+  ..|+.+++++|+++|++++..+  ..|.+|  +|.|      
T Consensus        81 ~~~-~~~~iv~~Ll~~ga~i~~~-d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~--~~g~t~--L~~A------  148 (480)
T PHA03100         81 NLT-DVKEIVKLLLEYGANVNAP-DNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKN--SDGENL--LHLY------  148 (480)
T ss_pred             Hhh-chHHHHHHHHHCCCCCCCC-CCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccC--CCCCcH--HHHH------
Confidence            999 9999999999999999777 999999999999  9999999999999999999998  899999  9999      


Q ss_pred             HhhhHHHhhhHHHHHhhhcC--chHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC---
Q psy15068        510 KKINDLLKLNLDFLKNVRSN--KYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATG---  584 (710)
Q Consensus       510 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g---  584 (710)
                                      +..+  +.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+..|   
T Consensus       149 ----------------~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~  212 (480)
T PHA03100        149 ----------------LESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLF  212 (480)
T ss_pred             ----------------HHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcH
Confidence                            8888  9999999999999999999999999999999999999999999999999999999   


Q ss_pred             ---CcHHHHHHhcCCc--hHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhH
Q psy15068        585 ---FTALHMACRFHSN--DNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHR  659 (710)
Q Consensus       585 ---~t~L~~A~~~~~~--~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~  659 (710)
                         .||||+|+.. ++  .+++++|+++|++++.++ ..|.||||+|+..|+.+++++|+++|+|+|.+|..|.||| |+
T Consensus       213 ~~~~t~l~~a~~~-~~~~~~iv~~Ll~~g~din~~d-~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl-~~  289 (480)
T PHA03100        213 TIFETPLHIAACY-NEITLEVVNYLLSYGVPINIKD-VYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPL-HI  289 (480)
T ss_pred             HHHHhHHHHHHHh-CcCcHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHH-HH
Confidence               9999999999 98  999999999999999999 9999999999999999999999999999999999999999 99


Q ss_pred             HHHhhh---cccccceeehhHHHHhhh
Q psy15068        660 IELMNS---AKQLGLVHVFEIMKVVKN  683 (710)
Q Consensus       660 A~~~~~---~~~L~~~~g~~~~~~~~~  683 (710)
                      |+..++   +++| +++|+++  +..+
T Consensus       290 A~~~~~~~iv~~L-l~~g~~i--~~i~  313 (480)
T PHA03100        290 AILNNNKEIFKLL-LNNGPSI--KTII  313 (480)
T ss_pred             HHHhCCHHHHHHH-HhcCCCH--HHHH
Confidence            999998   9999 9999999  6654

>PHA02878 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.4e-40  Score=344.38  Aligned_cols=278  Identities=23%  Similarity=0.182  Sum_probs=241.4

Q ss_pred             CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCC
Q psy15068        371 INAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGAD  450 (710)
Q Consensus       371 ~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~  450 (710)
                      .+..+..+.||||.|+..|+.+++++|++.|++++..+..             |.||||+||.. ++.++++.|++.+.+
T Consensus        30 ~~~~~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~-------------g~TpLh~A~~~-g~~~~v~~Ll~~~~~   95 (477)
T PHA02878         30 STSASLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHR-------------DLTPLHIICKE-PNKLGMKEMIRSINK   95 (477)
T ss_pred             cCcccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-------------CCCHHHHHHHC-ccHhHHHHHHHHHhc
Confidence            3445567889999999999999999999999999988777             99999999999 999999999998766


Q ss_pred             CCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCc
Q psy15068        451 VNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNK  530 (710)
Q Consensus       451 ~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~  530 (710)
                      ...   ..+.+|++.|+..++.+++++|+..+.+.....   . ...  +....                    ......
T Consensus        96 ~~~---~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~---~-~~~--~~~~~--------------------~~~~~~  146 (477)
T PHA02878         96 CSV---FYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTI---D-LVY--IDKKS--------------------KDDIIE  146 (477)
T ss_pred             ccc---ccchhhHHHHHHcCCHHHHHHHHhCcccCcccC---c-HHH--Hhhcc--------------------chhhHH
Confidence            543   467899999999999999999998865432211   0 000  10000                    011223


Q ss_pred             hHHHHHHHhcCCcccccCCC-CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCC
Q psy15068        531 YDEVKKNIEDGACVNVSSER-RGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGA  609 (710)
Q Consensus       531 ~~~~~~ll~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~  609 (710)
                      .+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.. ++.+++++|+++|+
T Consensus       147 ~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~-~~~~iv~~Ll~~ga  225 (477)
T PHA02878        147 AEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKH-YNKPIVHILLENGA  225 (477)
T ss_pred             HHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHh-CCHHHHHHHHHcCC
Confidence            46999999999999999998 99999999999999999999999999999999999999999999 99999999999999


Q ss_pred             CCCCCCCCCCCCHhHHHHhC-CChhHHHHHHhhhhccccCCC-CCCCchhhHHHHhhh-cccccceeehhHHHHhhhccc
Q psy15068        610 YYDMKDGKTGKTPLKHAEAG-KNRDIIDLLHLIDNLFASVTN-PYDPNVYHRIELMNS-AKQLGLVHVFEIMKVVKNYAG  686 (710)
Q Consensus       610 ~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~~A~~~~~-~~~L~~~~g~~~~~~~~~~~G  686 (710)
                      +++.++ ..|.||||+|+.. ++.+++++|+++|+++|.++. .|.||| |+|+.... +++| +++|||+  |.+|.+|
T Consensus       226 ~in~~d-~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpL-h~A~~~~~~v~~L-l~~gadi--n~~d~~g  300 (477)
T PHA02878        226 STDARD-KCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTAL-HSSIKSERKLKLL-LEYGADI--NSLNSYK  300 (477)
T ss_pred             CCCCCC-CCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHH-HHHccCHHHHHHH-HHCCCCC--CCcCCCC
Confidence            999999 9999999999975 789999999999999999986 899999 99965444 9999 9999999  9999999


Q ss_pred             chhHHHHhhhc
Q psy15068        687 ETLIGVARKMN  697 (710)
Q Consensus       687 ~t~l~~a~~~~  697 (710)
                      .||||+|+..+
T Consensus       301 ~TpL~~A~~~~  311 (477)
T PHA02878        301 LTPLSSAVKQY  311 (477)
T ss_pred             CCHHHHHHHHc
Confidence            99999999854

>PHA02792 ankyrin-like protein; Provisional

Probab=100.00  E-value=3.5e-39  Score=321.90  Aligned_cols=421  Identities=15%  Similarity=0.117  Sum_probs=298.7

Q ss_pred             HHHHHHcCCCcccCCCCCCCCHHHHHHHhCCH-HHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCc
Q psy15068        178 ISMLIENGANVREKMPFTDFSPLHFAVVKKNL-SVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFD  256 (710)
Q Consensus       178 ~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~-~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~  256 (710)
                      .+.|++.|+++... . .+.|||+.-..+.+. .-++.++..+..++..+-.+..+.-..|..+|+.|+++ +|.++|++
T Consensus        21 ~~~l~~~g~~~~~~-~-~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~s~n~~lElvk-~LI~~GAd   97 (631)
T PHA02792         21 AQSLIESGANPLYE-Y-DGETPLKAYVTKKNNNIKNDVVILLLSSVDYKNINDFDIFEYLCSDNIDIELLK-LLISKGLE   97 (631)
T ss_pred             HHHHHHcCCCcccc-c-CCCccHHHHHhhhhhhHHHHHHHHHHhCCCcCccCCccHHHHHHHhcccHHHHH-HHHHcCCC
Confidence            45667777766652 2 566777776555543 23455556666666666666666333466778888888 77778888


Q ss_pred             cccCCCCCCcHHHHHHH-cCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCcc
Q psy15068        257 VSISDGDLNSLLHKACH-VGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNL  335 (710)
Q Consensus       257 ~~~~~~~~~t~L~~A~~-~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~  335 (710)
                      ++..+..+.+|+++|.. .++.+++++|+++|+++...+.+|.||+..-+.....    ..|  + .+.+          
T Consensus        98 vN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~----~~~--~-~~~~----------  160 (631)
T PHA02792         98 INSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEY----YNW--D-DELD----------  160 (631)
T ss_pred             cccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccc----cch--h-hhcc----------
Confidence            88888888899999965 6999999999999999888888999988765432211    000  0 0000          


Q ss_pred             hhhhhhccCCcccccHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC-------CHHHHHHHHHcCCCCCchh
Q psy15068        336 LLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHC-------DLQSAKYLIQKGANVNLTE  408 (710)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~-------~~~~~~~Ll~~g~~~~~~~  408 (710)
                                                  =-+.+..+|..+..|.||||+|+..+       +.++++.|+++|++++..+
T Consensus       161 ----------------------------~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d  212 (631)
T PHA02792        161 ----------------------------DYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYT  212 (631)
T ss_pred             ----------------------------ccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccC
Confidence                                        00134456788889999999999999       8999999999999999877


Q ss_pred             hhhhhhhccccCccccCCHHHHHHHccC--cHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHc------C--CHhHHHHH
Q psy15068        409 TQKAFISDARSSDFCFRSALQYACKHKN--NIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQS------G--DFQIVKEL  478 (710)
Q Consensus       409 ~~~~~~~~~~~~~~~~~t~l~~A~~~~~--~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~------~--~~~~v~~L  478 (710)
                      ..             |.||||+|+.+ .  ..|++++|++...+..     .....|..-.+.      .  +..+|..|
T Consensus       213 ~~-------------g~t~l~~~~~~-~~i~~ei~~~L~~~~~~~~-----~~~~~l~~y~~~~~~~~~~~id~~iv~~l  273 (631)
T PHA02792        213 YR-------------EHTTLYYYVDK-CDIKREIFDALFDSNYSGN-----ELMNILSNYLRKQYRNKNHKIDNYIVDKL  273 (631)
T ss_pred             CC-------------CChHHHHHHHc-ccchHHHHHHHHhcccccc-----chHhHHHHHHHHHhccCccCccHHHHHHH
Confidence            77             99999999998 7  7899999998633221     112233322221      1  34589999


Q ss_pred             HHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhH-HHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHH
Q psy15068        479 QNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNL-DFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIY  557 (710)
Q Consensus       479 l~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~  557 (710)
                      ++.+..-+........+.-....     ...+++...++.-. .++. -..-+.+++++|+++|+++.  ......+++.
T Consensus       274 l~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~~~~~q~~l~~Yl~-~~~v~ieiIK~LId~Ga~~~--r~~~~n~~~~  345 (631)
T PHA02792        274 LSGHDTFYILELCNSLRNNIIIS-----SILKRYTDSIQDLLSEYVS-YHTVYINVIKCMIDEGATLY--RFKHINKYFQ  345 (631)
T ss_pred             HhCCCccchhhhhhhhhhhhHHH-----HHHHHHhHHHHHHHHHHHh-cCCccHHHHHHHHHCCCccc--cCCcchHHHH
Confidence            98775322111000000000000     00011111111111 0111 12457899999999999875  2335667999


Q ss_pred             HHHcCCHHHHHHHHHcCCCCcccCCCC--CcHHHHHHhcCCch---HHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCCh
Q psy15068        558 VAWKGYEEIVDLLLDNGADVNFKSATG--FTALHMACRFHSND---NIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNR  632 (710)
Q Consensus       558 A~~~~~~~~v~~Ll~~g~~~~~~~~~g--~t~L~~A~~~~~~~---~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~  632 (710)
                      |+..|+.+++++|+++|++++.+|..|  .||||+|+.. ...   +++++|+++|++++.++ ..|.||||+|+..++.
T Consensus       346 Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n-~~~~v~~IlklLIs~GADIN~kD-~~G~TPLh~Aa~~~n~  423 (631)
T PHA02792        346 KFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSI-HESDVLSILKLCKPYIDDINKID-KHGRSILYYCIESHSV  423 (631)
T ss_pred             HHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHh-ccHhHHHHHHHHHhcCCcccccc-ccCcchHHHHHHcCCH
Confidence            999999999999999999999998775  6999998776 443   46899999999999999 9999999999999999


Q ss_pred             hHHHHHHhhhhccccCCCCCCCchhhHHHH--hhh-----------cccccceeehhH
Q psy15068        633 DIIDLLHLIDNLFASVTNPYDPNVYHRIEL--MNS-----------AKQLGLVHVFEI  677 (710)
Q Consensus       633 ~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~--~~~-----------~~~L~~~~g~~~  677 (710)
                      +++++|+++|+++|.+|..|+||| |+|+.  .+.           ++.| +++|+++
T Consensus       424 eivelLLs~GADIN~kD~~G~TpL-~~A~~~~~~~~~~i~~~~~~il~lL-Ls~~p~i  479 (631)
T PHA02792        424 SLVEWLIDNGADINITTKYGSTCI-GICVILAHACIPEIAELYIKILEII-LSKLPTI  479 (631)
T ss_pred             HHHHHHHHCCCCCCCcCCCCCCHH-HHHHHHHhcccHHHHHHHHHHHHHH-HhcCCCh
Confidence            999999999999999999999999 99976  211           8889 9999887

>PHA03100 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.2e-39  Score=340.85  Aligned_cols=293  Identities=26%  Similarity=0.310  Sum_probs=255.6

Q ss_pred             cChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHH-----HHHcCcHHHHH
Q psy15068         33 FSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYM-----AILQGLYKMVT  107 (710)
Q Consensus        33 ~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~-----A~~~g~~~~v~  107 (710)
                      ....++++++++.+...+..+..+.||||.|+..|+.++|++|++.|+ +++..+..|.||||+     |+..|+.++++
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~-~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~   90 (480)
T PHA03100         12 IIKVKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGA-DINSSTKNNSTPLHYLSNIKYNLTDVKEIVK   90 (480)
T ss_pred             HHHHHHHHHHHhcCccchhhhcccchhhhhhhccCCHHHHHHHHHcCC-CCCCccccCcCHHHHHHHHHHHhhchHHHHH
Confidence            356788999998887777888899999999999999999999999999 999999999999999     99999999999


Q ss_pred             HHHHcCCCCCCCCCCCCCHHHHHH--hcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcC
Q psy15068        108 LLIHHGANVNDRDEKGYTPLHLAC--YLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENG  185 (710)
Q Consensus       108 ~Ll~~g~~~~~~~~~~~t~L~~A~--~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~  185 (710)
                      +|++.|++++..|..|.||||+|+  ..|+.+++++|+++|++++..+..|.||||+|+..+..    +.+++++|+++|
T Consensus        91 ~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~----~~~iv~~Ll~~g  166 (480)
T PHA03100         91 LLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKI----DLKILKLLIDKG  166 (480)
T ss_pred             HHHHCCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCC----hHHHHHHHHHCC
Confidence            999999999999999999999999  99999999999999999999999999999999887732    678899999999


Q ss_pred             CCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCC
Q psy15068        186 ANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLN  265 (710)
Q Consensus       186 ~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~  265 (710)
                      ++++..+. .|.||||.|+..|+.+++++|+++|++++..+..+.++ ++.                            .
T Consensus       167 ~din~~d~-~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~-~~~----------------------------~  216 (480)
T PHA03100        167 VDINAKNR-YGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLF-TIF----------------------------E  216 (480)
T ss_pred             CCcccccC-CCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcH-HHH----------------------------H
Confidence            98888877 88899999999999999999999998888777666555 332                            5


Q ss_pred             cHHHHHHHcCC--HHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCcchhhhhhcc
Q psy15068        266 SLLHKACHVGN--LQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSL  343 (710)
Q Consensus       266 t~L~~A~~~~~--~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~  343 (710)
                      ||||.|+..++  .+++++|+++|++++..+..|.||||+|+..++.                                 
T Consensus       217 t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~---------------------------------  263 (480)
T PHA03100        217 TPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNP---------------------------------  263 (480)
T ss_pred             hHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH---------------------------------
Confidence            88888888888  8888989888888888888888999988888877                                 


Q ss_pred             CCcccccHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchh
Q psy15068        344 KDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTE  408 (710)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~  408 (710)
                                     +++++|++.|++++.++..|.||+++|+..++.+++++|+++|++++...
T Consensus       264 ---------------~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i~~i~  313 (480)
T PHA03100        264 ---------------EFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKTII  313 (480)
T ss_pred             ---------------HHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCCHHHHH
Confidence                           56666666888888888889999999999999999999999998876543

>PHA02792 ankyrin-like protein; Provisional

Probab=100.00  E-value=9.2e-39  Score=318.93  Aligned_cols=221  Identities=10%  Similarity=0.127  Sum_probs=141.8

Q ss_pred             hhHHHHHHhcCCHHH--HHHHHhcCCCCCccccCCCCcHHHHHHHcCcH-HHHHHHHHcCCCCCCCCCCCCCHHHH-HHh
Q psy15068         57 LTLLCSAVWDNKIRE--VEFLLSTGDHDVNEKLQDGRTALYMAILQGLY-KMVTLLIHHGANVNDRDEKGYTPLHL-ACY  132 (710)
Q Consensus        57 ~t~L~~A~~~g~~~~--v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~g~~~~~~~~~~~t~L~~-A~~  132 (710)
                      ...|...|+.=+++.  .+.|++.|+ ++-. ...|.||||.=..+.+. .-++.++.-|.+++..+.+|..|+|+ |..
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~l~~~g~-~~~~-~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~s~   81 (631)
T PHA02792          4 DKILYDSCKTFNIDACSAQSLIESGA-NPLY-EYDGETPLKAYVTKKNNNIKNDVVILLLSSVDYKNINDFDIFEYLCSD   81 (631)
T ss_pred             hhHHHhHhhccchhHHHHHHHHHcCC-Cccc-ccCCCccHHHHHhhhhhhHHHHHHHHHHhCCCcCccCCccHHHHHHHh
Confidence            445555555554443  346677777 5555 35566777766544432 22345555555666666667777765 445


Q ss_pred             cCCHHHHHHHHhCCCCccccccCCCchhHHhhh-ccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHH
Q psy15068        133 LGNKNIVKFLLSKKADVRAKCSMMVTPILAVSA-NMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSV  211 (710)
Q Consensus       133 ~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~-~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~  211 (710)
                      +|+.|+|++|+++||+++.++..+.+|+++|+. .+      +.|++++|+++|++...... .|.||++.-+...    
T Consensus        82 n~~lElvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~------~~eivk~Ll~~Gad~~~~~~-~g~~~~~~~~~~~----  150 (631)
T PHA02792         82 NIDIELLKLLISKGLEINSIKNGINIVEKYATTSNP------NVDVFKLLLDKGIPTCSNIQ-YGYKIIIEQITRA----  150 (631)
T ss_pred             cccHHHHHHHHHcCCCcccccCCCCcceeEeecCCC------ChHHHHHHHHCCCCcccccc-cCcchhhhhcccc----
Confidence            667777777777777777776666677666643 45      66777777777766655554 6666655433211    


Q ss_pred             HHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHc--cCCCccccCCCCCCcHHHHHHHcC-------CHHHHHH
Q psy15068        212 VELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLN--SKNFDVSISDGDLNSLLHKACHVG-------NLQIVQM  282 (710)
Q Consensus       212 v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~--~~~~~~~~~~~~~~t~L~~A~~~~-------~~~~v~~  282 (710)
                                                   ...+.-. .+.  +.+..++..+..|.||||+|+..+       +.+++++
T Consensus       151 -----------------------------~~~~~~~-~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~  200 (631)
T PHA02792        151 -----------------------------EYYNWDD-ELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINY  200 (631)
T ss_pred             -----------------------------cccchhh-hccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHH
Confidence                                         1100000 111  123445677888889999998888       7899999


Q ss_pred             HHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhh
Q psy15068        283 LVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQ  320 (710)
Q Consensus       283 Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~  320 (710)
                      |+++|++++..+..|.||||+|+.....+.|++++|+.
T Consensus       201 Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~  238 (631)
T PHA02792        201 LISHEKEMRYYTYREHTTLYYYVDKCDIKREIFDALFD  238 (631)
T ss_pred             HHhCCCCcCccCCCCChHHHHHHHcccchHHHHHHHHh
Confidence            99999998888888999999998888555588888877

>PHA02878 ankyrin repeat protein; Provisional

Probab=100.00  E-value=3.9e-39  Score=333.65  Aligned_cols=306  Identities=21%  Similarity=0.215  Sum_probs=225.2

Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCcchhhh
Q psy15068        260 SDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDT  339 (710)
Q Consensus       260 ~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~  339 (710)
                      ....+.||||.|+..|+.++|++|+++|++++..+..|.||||+|+..|+.                             
T Consensus        33 ~~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~-----------------------------   83 (477)
T PHA02878         33 ASLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNK-----------------------------   83 (477)
T ss_pred             ccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccH-----------------------------
Confidence            344667888888888888888888888888888888888888888887776                             


Q ss_pred             hhccCCcccccHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhcccc
Q psy15068        340 VMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARS  419 (710)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~  419 (710)
                                         +.++.|++.+...+.  ..+.++++.|+..++.+++++|+..+.+.......         
T Consensus        84 -------------------~~v~~Ll~~~~~~~~--~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~~~---------  133 (477)
T PHA02878         84 -------------------LGMKEMIRSINKCSV--FYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDL---------  133 (477)
T ss_pred             -------------------hHHHHHHHHHhcccc--ccchhhHHHHHHcCCHHHHHHHHhCcccCcccCcH---------
Confidence                               556666666544333  34567888888888888888888765443211100         


Q ss_pred             CccccCCHHHHHHHc-cCcHHHHHHHHHCCCCCCCCCCCC-CCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHH
Q psy15068        420 SDFCFRSALQYACKH-KNNIEMVKLLLLHGADVNDTSNKP-KQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAA  497 (710)
Q Consensus       420 ~~~~~~t~l~~A~~~-~~~~~~~~~Ll~~~~~~~~~~~~~-~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~  497 (710)
                            ..+...... ....+++++|+++|++++.. +.. |.||||+|+..|+.+++++|+++|+++            
T Consensus       134 ------~~~~~~~~~~~~~~~iv~~Ll~~gadin~~-~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~------------  194 (477)
T PHA02878        134 ------VYIDKKSKDDIIEAEITKLLLSYGADINMK-DRHKGNTALHYATENKDQRLTELLLSYGANV------------  194 (477)
T ss_pred             ------HHHhhccchhhHHHHHHHHHHHcCCCCCcc-CCCCCCCHHHHHHhCCCHHHHHHHHHCCCCC------------
Confidence                  011111111 02345777777777777776 555 777777777777777777777666554            


Q ss_pred             HhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q psy15068        498 RIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADV  577 (710)
Q Consensus       498 ~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~  577 (710)
                                                                     +.++..|.||||.|+..++.+++++|+++|+++
T Consensus       195 -----------------------------------------------n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~i  227 (477)
T PHA02878        195 -----------------------------------------------NIPDKTNNSPLHHAVKHYNKPIVHILLENGAST  227 (477)
T ss_pred             -----------------------------------------------CCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence                                                           455677889999999999999999999999999


Q ss_pred             cccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchh
Q psy15068        578 NFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVY  657 (710)
Q Consensus       578 ~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~  657 (710)
                      +.+|..|+||||+|+...++.+++++|+++|++++.+++..|.||||+|  .++.+++++|+++|+|+|.+|..|.||| 
T Consensus       228 n~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL-  304 (477)
T PHA02878        228 DARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPL-  304 (477)
T ss_pred             CCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHH-
Confidence            9999999999999987546889999999999999888745789999999  4678889999999999999999999999 


Q ss_pred             hHHHHhhh----cccccceee-----hhHHHHhhhcccchhHHHHhhh
Q psy15068        658 HRIELMNS----AKQLGLVHV-----FEIMKVVKNYAGETLIGVARKM  696 (710)
Q Consensus       658 ~~A~~~~~----~~~L~~~~g-----~~~~~~~~~~~G~t~l~~a~~~  696 (710)
                      |+|+..+.    +++| ++++     .++  +.++..|+++-.-++..
T Consensus       305 ~~A~~~~~~~~~~~~l-i~~~~~~~~~~~--~~~~~~g~~~n~~~i~~  349 (477)
T PHA02878        305 SSAVKQYLCINIGRIL-ISNICLLKRIKP--DIKNSEGFIDNMDCITS  349 (477)
T ss_pred             HHHHHHcCccchHHHH-HHHHHHHHhccC--cccCcHHHHHHHHHHhc
Confidence            99987654    5556 5543     455  67778888776555443

>PHA02791 ankyrin-like protein; Provisional

Probab=100.00  E-value=3.5e-38  Score=293.81  Aligned_cols=238  Identities=19%  Similarity=0.177  Sum_probs=209.0

Q ss_pred             hcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHH
Q psy15068         32 MFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIH  111 (710)
Q Consensus        32 ~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~  111 (710)
                      ..++.+++++|+++|+  +.+|.+|.||||+|+..|+.+++++|++.|+ +++..+  |+||||+|+..|+.+++++|++
T Consensus         8 ~~~~~~~~~~Lis~~a--~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga-~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~   82 (284)
T PHA02791          8 TWKSKQLKSFLSSKDA--FKADVHGHSALYYAIADNNVRLVCTLLNAGA-LKNLLE--NEFPLHQAATLEDTKIVKILLF   82 (284)
T ss_pred             ccCHHHHHHHHHhCCC--CCCCCCCCcHHHHHHHcCCHHHHHHHHHCcC-CCcCCC--CCCHHHHHHHCCCHHHHHHHHH
Confidence            4578999999999887  4678999999999999999999999999998 887764  7899999999999999999999


Q ss_pred             cCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCC-chhHHhhhccCCCCCCHHHHHHHHHHcCCCccc
Q psy15068        112 HGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMV-TPILAVSANMSEDSTDTNEIISMLIENGANVRE  190 (710)
Q Consensus       112 ~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~-~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~  190 (710)
                      .|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..|. |||++|+..+      +.+++++|++++.+.. 
T Consensus        83 ~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g------~~eivk~LL~~~~~~~-  155 (284)
T PHA02791         83 SGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLN------DVSIVSYFLSEIPSTF-  155 (284)
T ss_pred             CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcC------CHHHHHHHHhcCCccc-
Confidence            9999999999999999999999999999999999999998888874 8999999999      9999999999875432 


Q ss_pred             CCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHH
Q psy15068        191 KMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHK  270 (710)
Q Consensus       191 ~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~  270 (710)
                       +...|.||||+|+..|+.+++++|+++|++++..+..+.+||||+|+..|+.++++ +|+++|++++..+..+ ++|  
T Consensus       156 -d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~-lLl~~Ga~in~~~~~~-~~l--  230 (284)
T PHA02791        156 -DLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQ-ALFKYDINIYSVNLEN-VLL--  230 (284)
T ss_pred             -ccccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHH-HHHHCCCCCccCcccC-ccC--
Confidence             11157899999999999999999999999999888888887789999999999998 8888899998888754 444  


Q ss_pred             HHHcCCHHHHHHHHHcCCCC
Q psy15068        271 ACHVGNLQIVQMLVKRKFDI  290 (710)
Q Consensus       271 A~~~~~~~~v~~Ll~~g~~~  290 (710)
                          ++.+++++||++-++.
T Consensus       231 ----~~~e~~~~ll~~~~~~  246 (284)
T PHA02791        231 ----DDAEIAKMIIEKHVEY  246 (284)
T ss_pred             ----CCHHHHHHHHHhhhhh
Confidence                8888999999876554

>PHA02989 ankyrin repeat protein; Provisional

Probab=100.00  E-value=6.7e-38  Score=325.16  Aligned_cols=279  Identities=22%  Similarity=0.270  Sum_probs=245.3

Q ss_pred             hhcChhhHHHHHHhhhccCCCccccchhHHHHHHhc--CCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcC------c
Q psy15068         31 IMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWD--NKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQG------L  102 (710)
Q Consensus        31 ~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g------~  102 (710)
                      ......+++++|+++|+++|.. ..|.|+||.++..  ++.++|++|+++|+ ++|.++ .+.||||.|+.++      +
T Consensus        11 ~~~~~~~~v~~LL~~GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GA-dvn~~~-~~~tpL~~a~~~~~~~~~~~   87 (494)
T PHA02989         11 SDTVDKNALEFLLRTGFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGA-DVNYKG-YIETPLCAVLRNREITSNKI   87 (494)
T ss_pred             CCcCcHHHHHHHHHcCCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCC-CccCCC-CCCCcHHHHHhccCcchhhH
Confidence            3458899999999999999998 6788998765544  37999999999999 999886 5799999998754      5


Q ss_pred             HHHHHHHHHcCCCCCCCCCCCCCHHHHHHhc---CCHHHHHHHHhCCCCc-cccccCCCchhHHhhhccCCCCCCHHHHH
Q psy15068        103 YKMVTLLIHHGANVNDRDEKGYTPLHLACYL---GNKNIVKFLLSKKADV-RAKCSMMVTPILAVSANMSEDSTDTNEII  178 (710)
Q Consensus       103 ~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~---g~~~iv~~Ll~~g~~~-~~~~~~~~~~l~~a~~~~~~~~~~~~~~~  178 (710)
                      .+++++|+++|++++.+|..|.||||.|+..   |+.+++++|+++|+++ +..+..|.||||+|+..+..    +.+++
T Consensus        88 ~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~----~~~iv  163 (494)
T PHA02989         88 KKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSV----KKDVI  163 (494)
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccC----CHHHH
Confidence            7899999999999999999999999988765   6799999999999999 89999999999998764311    78999


Q ss_pred             HHHHHcCCCcccCCCCCCCCHHHHHHHhC----CHHHHHHHHhCCCCcchhhccCCChhHHHHHhc------CcHHHHHH
Q psy15068        179 SMLIENGANVREKMPFTDFSPLHFAVVKK----NLSVVELLIKCKADTNLIVKVNQEPLLFFAIES------NSVKIVEA  248 (710)
Q Consensus       179 ~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~----~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~------~~~~~v~~  248 (710)
                      ++|+++|++++......|.|||+.|+..+    +.+++++|++.|++++..+..+.++ ++.++..      +..++++ 
T Consensus       164 ~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~-l~~~~~~~~~~~~~~~~il~-  241 (494)
T PHA02989        164 KILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESV-LESFLDNNKILSKKEFKVLN-  241 (494)
T ss_pred             HHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccH-HHHHHHhchhhcccchHHHH-
Confidence            99999999998854448999999988754    8999999999999999888766666 8876654      3567888 


Q ss_pred             HHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhhc
Q psy15068        249 FLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQ  321 (710)
Q Consensus       249 lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~  321 (710)
                      +|.. +++++..|..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..++.  +++++|++.
T Consensus       242 ~l~~-~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~--~iv~~LL~~  311 (494)
T PHA02989        242 FILK-YIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNI--DMLNRILQL  311 (494)
T ss_pred             HHHh-CCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCH--HHHHHHHhc
Confidence            5554 599999999999999999999999999999999999999999999999999999987  999999984

>KOG0508|consensus

Probab=100.00  E-value=2e-37  Score=284.75  Aligned_cols=196  Identities=25%  Similarity=0.371  Sum_probs=180.2

Q ss_pred             cceecccccccccchhhhhhcChhhHHHHHHh-hhcc--------CCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCC
Q psy15068         13 LVHSVKESSYRHHHLFSEIMFSEEDAFGYFLQ-GIIN--------SSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDV   83 (710)
Q Consensus        13 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~-~~~~--------~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~   83 (710)
                      +.+.....+.+-|||..|+++|+.++|+||++ .+++        ++.....|.+||..|+-.|++++||.|+++|+ ++
T Consensus        32 i~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga-~V  110 (615)
T KOG0508|consen   32 IISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGA-SV  110 (615)
T ss_pred             HHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcC-cc
Confidence            44445556667799999999999999999999 4444        44445578899999999999999999999998 99


Q ss_pred             ccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHh
Q psy15068         84 NEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAV  163 (710)
Q Consensus        84 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a  163 (710)
                      |.......|||--||..|+.|++|+|+++|++++..|..|.|.|+.||..||.+|++||++.|+|+|.++..|.|+||.+
T Consensus       111 N~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~c  190 (615)
T KOG0508|consen  111 NDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDC  190 (615)
T ss_pred             ccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHh
Q psy15068        164 SANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIK  217 (710)
Q Consensus       164 ~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~  217 (710)
                      +..|      +.+++++|+++|+.++...  .|.|||..|...|+.++|+.|+.
T Consensus       191 aEsG------~vdivq~Ll~~ga~i~~d~--~GmtPL~~Aa~tG~~~iVe~L~~  236 (615)
T KOG0508|consen  191 AESG------SVDIVQLLLKHGAKIDVDG--HGMTPLLLAAVTGHTDIVERLLQ  236 (615)
T ss_pred             hhcc------cHHHHHHHHhCCceeeecC--CCCchHHHHhhhcchHHHHHHhc
Confidence            9999      9999999999999876543  79999999999999999999996

>PHA02989 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.9e-36  Score=314.26  Aligned_cols=288  Identities=25%  Similarity=0.302  Sum_probs=193.7

Q ss_pred             cCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHc--CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcC------CHH
Q psy15068         66 DNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQ--GLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLG------NKN  137 (710)
Q Consensus        66 ~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g------~~~  137 (710)
                      ..+.++|++|+++|+ ++|.+ ..|.||||.++..  ++.++|++|+++|+++|.++ .+.||||.|+.++      +.+
T Consensus        13 ~~~~~~v~~LL~~Ga-dvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~   89 (494)
T PHA02989         13 TVDKNALEFLLRTGF-DVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YIETPLCAVLRNREITSNKIKK   89 (494)
T ss_pred             cCcHHHHHHHHHcCC-Ccccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-CCCCcHHHHHhccCcchhhHHH
Confidence            467778888888877 77777 5677777654443  25778888888888777665 4577887776543      356


Q ss_pred             HHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCc-ccCCCCCCCCHHHHHHHh--CCHHHHHH
Q psy15068        138 IVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANV-REKMPFTDFSPLHFAVVK--KNLSVVEL  214 (710)
Q Consensus       138 iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~-~~~~~~~~~~~l~~A~~~--~~~~~v~~  214 (710)
                      +|++|+++|++++.++..|.|||+.|+..+..   ++.+++++|+++|+++ +..+. .|.||||.|+..  ++.+++++
T Consensus        90 iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~---~~~eiv~~Ll~~Gadin~~~d~-~g~tpLh~a~~~~~~~~~iv~~  165 (494)
T PHA02989         90 IVKLLLKFGADINLKTFNGVSPIVCFIYNSNI---NNCDMLRFLLSKGINVNDVKNS-RGYNLLHMYLESFSVKKDVIKI  165 (494)
T ss_pred             HHHHHHHCCCCCCCCCCCCCcHHHHHHHhccc---CcHHHHHHHHHCCCCcccccCC-CCCCHHHHHHHhccCCHHHHHH
Confidence            77777777777777776677776666655311   1455666666666666 34443 556666655433  35555555


Q ss_pred             HHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHc----CCHHHHHHHHHcCCCC
Q psy15068        215 LIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHV----GNLQIVQMLVKRKFDI  290 (710)
Q Consensus       215 Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~----~~~~~v~~Ll~~g~~~  290 (710)
                      |+++|++++..                                  .+..|.|||+.|+..    ++.+++++|+++|+++
T Consensus       166 Ll~~Gadi~~~----------------------------------~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~v  211 (494)
T PHA02989        166 LLSFGVNLFEK----------------------------------TSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNI  211 (494)
T ss_pred             HHHcCCCcccc----------------------------------ccccCCChHHHHHhcccccccHHHHHHHHhCCCCc
Confidence            55555554431                                  344556677666554    3777888888888887


Q ss_pred             CCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCcchhhhhhccCCcccccHHHHHHHHHHHHHHHhcCCC
Q psy15068        291 NAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTEN  370 (710)
Q Consensus       291 ~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~  370 (710)
                      +..+..+.++++.++..+..    .                                      .....+++++++ .+++
T Consensus       212 n~~~~~~~t~l~~~~~~~~~----~--------------------------------------~~~~~~il~~l~-~~ad  248 (494)
T PHA02989        212 ETNNNGSESVLESFLDNNKI----L--------------------------------------SKKEFKVLNFIL-KYIK  248 (494)
T ss_pred             cccCCccccHHHHHHHhchh----h--------------------------------------cccchHHHHHHH-hCCC
Confidence            77777777777766543321    0                                      000014455444 3588


Q ss_pred             CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCC
Q psy15068        371 INAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGAD  450 (710)
Q Consensus       371 ~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~  450 (710)
                      ++.++..|.||||+|+..|+.+++++|++.|++++..+..             |.|||++|+.. ++.++++.|++.++.
T Consensus       249 vn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~-------------G~TpL~~A~~~-~~~~iv~~LL~~~p~  314 (494)
T PHA02989        249 INKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKD-------------GDTVLTYAIKH-GNIDMLNRILQLKPG  314 (494)
T ss_pred             CCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCC-------------CCCHHHHHHHc-CCHHHHHHHHhcCCC
Confidence            8888888889999998888888999999999888887777             88999998888 888888888887654


Q ss_pred             C
Q psy15068        451 V  451 (710)
Q Consensus       451 ~  451 (710)
                      .
T Consensus       315 ~  315 (494)
T PHA02989        315 K  315 (494)
T ss_pred             h
Confidence            3

>PHA02791 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.8e-36  Score=282.42  Aligned_cols=233  Identities=19%  Similarity=0.172  Sum_probs=209.9

Q ss_pred             cCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhC
Q psy15068         66 DNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSK  145 (710)
Q Consensus        66 ~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~  145 (710)
                      .++.+++++|+++++   +.+|.+|+||||+|+..|+.+++++|++.|++++..+  +.||||+|+..|+.++|++|+++
T Consensus         9 ~~~~~~~~~Lis~~a---~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~   83 (284)
T PHA02791          9 WKSKQLKSFLSSKDA---FKADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFS   83 (284)
T ss_pred             cCHHHHHHHHHhCCC---CCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHC
Confidence            468999999999877   4679999999999999999999999999999988764  68999999999999999999999


Q ss_pred             CCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCC-CCHHHHHHHhCCHHHHHHHHhCCCCcch
Q psy15068        146 KADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTD-FSPLHFAVVKKNLSVVELLIKCKADTNL  224 (710)
Q Consensus       146 g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~-~~~l~~A~~~~~~~~v~~Ll~~g~~~~~  224 (710)
                      |++++.++..|.||||+|+..+      +.+++++|+++|++++.... .| .|||+.|+..|+.+++++|++.+++...
T Consensus        84 Gadvn~~d~~G~TpLh~Aa~~g------~~eivk~Ll~~gadin~~~~-~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d  156 (284)
T PHA02791         84 GMDDSQFDDKGNTALYYAVDSG------NMQTVKLFVKKNWRLMFYGK-TGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD  156 (284)
T ss_pred             CCCCCCCCCCCCCHHHHHHHcC------CHHHHHHHHHCCCCcCccCC-CCCcHHHHHHHHcCCHHHHHHHHhcCCcccc
Confidence            9999999999999999999999      99999999999999988777 56 5899999999999999999998765421


Q ss_pred             hhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcH-HHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHH
Q psy15068        225 IVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSL-LHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFF  303 (710)
Q Consensus       225 ~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~-L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~  303 (710)
                      . ..+.+| ||+|+..|+.++++ +|+++|++++..+..|.|| ||+|+..|+.+++++|+++|++++.++.. .+++  
T Consensus       157 ~-~~g~Tp-Lh~Aa~~g~~eiv~-lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~~-~~~l--  230 (284)
T PHA02791        157 L-AILLSC-IHITIKNGHVDMMI-LLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNLE-NVLL--  230 (284)
T ss_pred             c-ccCccH-HHHHHHcCCHHHHH-HHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCccc-CccC--
Confidence            1 235666 99999999999999 8888999999999999987 99999999999999999999999999885 4666  


Q ss_pred             HHHhCCCcHHHHHHHhhcc
Q psy15068        304 AIGMGRKHTHVAEYLLQQD  322 (710)
Q Consensus       304 a~~~~~~~~~~~~~Ll~~~  322 (710)
                          +..  |++++|++.+
T Consensus       231 ----~~~--e~~~~ll~~~  243 (284)
T PHA02791        231 ----DDA--EIAKMIIEKH  243 (284)
T ss_pred             ----CCH--HHHHHHHHhh
Confidence                444  9999999843

>KOG4412|consensus

Probab=100.00  E-value=4.6e-37  Score=244.90  Aligned_cols=205  Identities=28%  Similarity=0.251  Sum_probs=178.5

Q ss_pred             cchhhhhhcChhhHHHHHHhhhc-cCCCccc-cchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCc
Q psy15068         25 HHLFSEIMFSEEDAFGYFLQGII-NSSSAKS-VELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGL  102 (710)
Q Consensus        25 ~~l~~a~~~~~~~~~~~ll~~~~-~~~~~~~-~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~  102 (710)
                      ++...++......-++.++++.. +.+.++. +|+||||+||..|+.+||.+|++.....+|-+|..||||||.||..|+
T Consensus         5 ~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~   84 (226)
T KOG4412|consen    5 SLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGN   84 (226)
T ss_pred             chHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCc
Confidence            45556666666777777777665 6677766 999999999999999999999976555888889999999999999999


Q ss_pred             HHHHHHHHHc-CCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHH
Q psy15068        103 YKMVTLLIHH-GANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISML  181 (710)
Q Consensus       103 ~~~v~~Ll~~-g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~L  181 (710)
                      .++|+.|+.+ |+++|..+..|.|+||||+-.|..+|+++|+++|+.++.+|..++||||.|+.-|      ..+++++|
T Consensus        85 ~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavG------klkvie~L  158 (226)
T KOG4412|consen   85 DEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVG------KLKVIEYL  158 (226)
T ss_pred             HHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhcc------chhhHHHH
Confidence            9999999998 9999999999999999999999999999999999999999999999999999999      99999999


Q ss_pred             HHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHH
Q psy15068        182 IENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAI  238 (710)
Q Consensus       182 l~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~  238 (710)
                      +..|+.++..+. .|+||||.|...|+.++..+|++.|+++...++.+ ++ +..|+
T Consensus       159 i~~~a~~n~qDk-~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edke~-t~-~~~a~  212 (226)
T KOG4412|consen  159 ISQGAPLNTQDK-YGFTPLHHALAEGHPDVAVLLVRAGADTDREDKEG-TA-LRIAC  212 (226)
T ss_pred             HhcCCCCCcccc-cCccHHHHHHhccCchHHHHHHHhccceeeccccC-ch-HHHHH
Confidence            999999999988 99999999988899999999999999988888766 55 55443

>PHA02875 ankyrin repeat protein; Provisional

Probab=100.00  E-value=8.5e-36  Score=304.40  Aligned_cols=240  Identities=24%  Similarity=0.289  Sum_probs=185.0

Q ss_pred             ccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcH
Q psy15068         24 HHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLY  103 (710)
Q Consensus        24 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~  103 (710)
                      +++|+.|+..|+.+++++|+++|++++..+..|.||||.|+..|+.+++++|+++|+ +++..+..+.||||+|+..|+.
T Consensus         3 ~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~~~t~L~~A~~~g~~   81 (413)
T PHA02875          3 QVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGA-IPDVKYPDIESELHDAVEEGDV   81 (413)
T ss_pred             chHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCC-CccccCCCcccHHHHHHHCCCH
Confidence            567888888888888888888888888888888888888888888888888888888 7777777888888888888888


Q ss_pred             HHHHHHHHcCCCCC-CCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHH
Q psy15068        104 KMVTLLIHHGANVN-DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLI  182 (710)
Q Consensus       104 ~~v~~Ll~~g~~~~-~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll  182 (710)
                      +++++|++.|+..+ ..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..+      +.+++++|+
T Consensus        82 ~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~------~~~~v~~Ll  155 (413)
T PHA02875         82 KAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMG------DIKGIELLI  155 (413)
T ss_pred             HHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcC------CHHHHHHHH
Confidence            88888888876653 34566788888888888888888888888888888888888888888887      788888888


Q ss_pred             HcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccC--
Q psy15068        183 ENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSIS--  260 (710)
Q Consensus       183 ~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~--  260 (710)
                      ++|++++..+. .|.||||+|+..|+.+++++|++.|++++..+..+.++++++|+..|+.++++ +|.+.|++++..  
T Consensus       156 ~~g~~~~~~d~-~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~-~Ll~~gad~n~~~~  233 (413)
T PHA02875        156 DHKACLDIEDC-CGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVR-LFIKRGADCNIMFM  233 (413)
T ss_pred             hcCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHH-HHHHCCcCcchHhh
Confidence            88887777766 77888888888888888888888888777766666555566676777777666 666666666543  


Q ss_pred             -CCCCCcHHHHHH
Q psy15068        261 -DGDLNSLLHKAC  272 (710)
Q Consensus       261 -~~~~~t~L~~A~  272 (710)
                       +..+.||++.++
T Consensus       234 ~~~~~~t~l~~~~  246 (413)
T PHA02875        234 IEGEECTILDMIC  246 (413)
T ss_pred             cCCCchHHHHHHH
Confidence             444556666544

>PHA02798 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.3e-35  Score=307.68  Aligned_cols=277  Identities=19%  Similarity=0.216  Sum_probs=239.6

Q ss_pred             ChhhHHHHHHhhhccCCCccccchhHHHHHHh--cCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHc-----CcHHHH
Q psy15068         34 SEEDAFGYFLQGIINSSSAKSVELTLLCSAVW--DNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQ-----GLYKMV  106 (710)
Q Consensus        34 ~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~-----g~~~~v  106 (710)
                      -..+.|+.|++.+ +++.. ..+.|+++.+..  .++.++|++|+++|+ +++.++..|.||||.|+.+     ++.+++
T Consensus        16 ~~~~~v~~ll~~~-~~~~~-~~~~~~~~~yl~~~~~~~~iv~~Ll~~Ga-dvn~~d~~g~TpL~~~~~n~~~~~~~~~iv   92 (489)
T PHA02798         16 VKLSTVKLLIKSC-NPNEI-VNEYSIFQKYLQRDSPSTDIVKLFINLGA-NVNGLDNEYSTPLCTILSNIKDYKHMLDIV   92 (489)
T ss_pred             ccHHHHHHHHhcC-Chhhh-cccchHHHHHHhCCCCCHHHHHHHHHCCC-CCCCCCCCCCChHHHHHHhHHhHHhHHHHH
Confidence            3477999999765 45444 456677664443  458999999999999 9999999999999999875     679999


Q ss_pred             HHHHHcCCCCCCCCCCCCCHHHHHHhcC---CHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHH
Q psy15068        107 TLLIHHGANVNDRDEKGYTPLHLACYLG---NKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIE  183 (710)
Q Consensus       107 ~~Ll~~g~~~~~~~~~~~t~L~~A~~~g---~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~  183 (710)
                      ++|+++|+++|.+|..|.||||+|+.++   +.+++++|+++|++++..+..|.||||+|+..+..   ...+++++|++
T Consensus        93 ~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~---~~~~vv~~Ll~  169 (489)
T PHA02798         93 KILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHH---IDIEIIKLLLE  169 (489)
T ss_pred             HHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCc---chHHHHHHHHH
Confidence            9999999999999999999999999986   78999999999999999999999999999998810   03999999999


Q ss_pred             cCCCcccCCCCCCCCHHHHHHHh----CCHHHHHHHHhCCCCcchhhccCCChhHH------HHHhcCcHHHHHHHHccC
Q psy15068        184 NGANVREKMPFTDFSPLHFAVVK----KNLSVVELLIKCKADTNLIVKVNQEPLLF------FAIESNSVKIVEAFLNSK  253 (710)
Q Consensus       184 ~~~~~~~~~~~~~~~~l~~A~~~----~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~------~A~~~~~~~~v~~lL~~~  253 (710)
                      +|++++..+...+.||+|.++..    ++.+++++|+++|++++..+..+.+++++      .+...+..++++ +|.. 
T Consensus       170 ~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~-~l~~-  247 (489)
T PHA02798        170 KGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILD-FIFS-  247 (489)
T ss_pred             hCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHH-HHHh-
Confidence            99999988765789999998764    48999999999999999888887777332      244566788888 5554 


Q ss_pred             CCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhh
Q psy15068        254 NFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQ  320 (710)
Q Consensus       254 ~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~  320 (710)
                      +++++..+..|.||||+|+..++.+++++|+++|++++..+..|.|||+.|+..++.  ++++.|++
T Consensus       248 ~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~--~iv~~lL~  312 (489)
T PHA02798        248 YIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENESK--FIFNSILN  312 (489)
T ss_pred             cCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcH--HHHHHHHc
Confidence            589999999999999999999999999999999999999999999999999999987  77777776

>KOG4412|consensus

Probab=100.00  E-value=1.3e-36  Score=242.42  Aligned_cols=204  Identities=25%  Similarity=0.262  Sum_probs=147.9

Q ss_pred             cCCHHHHHHHccCcHHHHHHHHHCCC-CCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhh
Q psy15068        424 FRSALQYACKHKNNIEMVKLLLLHGA-DVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHS  502 (710)
Q Consensus       424 ~~t~l~~A~~~~~~~~~~~~Ll~~~~-~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~  502 (710)
                      +.++.+.+|.. ....-++-+++..+ .++...+.+|+||||+||+.|+.+++.+|++ ..+                  
T Consensus         3 ~~~~~~~~~~~-~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLls-q~n------------------   62 (226)
T KOG4412|consen    3 YASLGKAICEN-CEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLS-QPN------------------   62 (226)
T ss_pred             ccchHHHHHhh-chHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHh-cCC------------------
Confidence            45677778877 66666777777776 6666656689999999999999999999985 211                  


Q ss_pred             hhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccC
Q psy15068        503 TTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDN-GADVNFKS  581 (710)
Q Consensus       503 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~  581 (710)
                                                             ..+|..|..|+||||.|+..|+.++|+-|+.+ |+|+|..+
T Consensus        63 ---------------------------------------v~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~t  103 (226)
T KOG4412|consen   63 ---------------------------------------VKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATT  103 (226)
T ss_pred             ---------------------------------------CCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceec
Confidence                                                   22445566677777777777777777777776 77777777


Q ss_pred             CCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHH
Q psy15068        582 ATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIE  661 (710)
Q Consensus       582 ~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~  661 (710)
                      ..|.||||||+-. |+.+++++|+++|+.++.+| +.|.||||-|+.-|+.+++++|++.|+.+|.+|+.|+||| |.|.
T Consensus       104 n~G~T~LHyAagK-~r~eIaqlLle~ga~i~~kD-~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL-~~al  180 (226)
T KOG4412|consen  104 NGGQTCLHYAAGK-GRLEIAQLLLEKGALIRIKD-KQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPL-HHAL  180 (226)
T ss_pred             CCCcceehhhhcC-ChhhHHHHHHhcCCCCcccc-cccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHH-HHHH
Confidence            7777777777776 77777777777777777777 7777777777777777777777777777777777777777 6666


Q ss_pred             Hhhh---cccccceeehhHHHHhhhcccchhHHHH
Q psy15068        662 LMNS---AKQLGLVHVFEIMKVVKNYAGETLIGVA  693 (710)
Q Consensus       662 ~~~~---~~~L~~~~g~~~~~~~~~~~G~t~l~~a  693 (710)
                      ..|+   ..+| +++||++  .+.|+.| ||+-+|
T Consensus       181 ~e~~~d~a~lL-V~~gAd~--~~edke~-t~~~~a  211 (226)
T KOG4412|consen  181 AEGHPDVAVLL-VRAGADT--DREDKEG-TALRIA  211 (226)
T ss_pred             hccCchHHHHH-HHhccce--eeccccC-chHHHH
Confidence            5666   5666 7777777  7777766 776655

>PHA02875 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2.1e-35  Score=301.53  Aligned_cols=242  Identities=25%  Similarity=0.225  Sum_probs=210.5

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCCC
Q psy15068        378 MITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNK  457 (710)
Q Consensus       378 ~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~~  457 (710)
                      .+++|+.|+..|+.+++++|++.|++++.....             |.||||+|+.. ++.+++++|+++|++++.. +.
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~-------------g~tpL~~A~~~-~~~~~v~~Ll~~ga~~~~~-~~   66 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLDIGINPNFEIYD-------------GISPIKLAMKF-RDSEAIKLLMKHGAIPDVK-YP   66 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHHCCCCCCccCCC-------------CCCHHHHHHHc-CCHHHHHHHHhCCCCcccc-CC
Confidence            358999999999999999999999999887766             89999999998 9999999999999988876 77


Q ss_pred             CCCCHHHHHHHcCCHhHHHHHHHcCCCCCc-hhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHH
Q psy15068        458 PKQKPLAVAIQSGDFQIVKELQNYGAQIDK-ENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKK  536 (710)
Q Consensus       458 ~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  536 (710)
                      .+.||||.|+..|+.+++++|++.|+.++. .+  ..|.+|  +|.|                      +..++.+++++
T Consensus        67 ~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~--~~g~tp--L~~A----------------------~~~~~~~iv~~  120 (413)
T PHA02875         67 DIESELHDAVEEGDVKAVEELLDLGKFADDVFY--KDGMTP--LHLA----------------------TILKKLDIMKL  120 (413)
T ss_pred             CcccHHHHHHHCCCHHHHHHHHHcCCccccccc--CCCCCH--HHHH----------------------HHhCCHHHHHH
Confidence            889999999999999999999999987643 33  567888  8888                      88888889999


Q ss_pred             HHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCC
Q psy15068        537 NIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDG  616 (710)
Q Consensus       537 ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~  616 (710)
                      |++.|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.. |+.+++++|+++|++++..+ 
T Consensus       121 Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~-g~~eiv~~Ll~~ga~~n~~~-  198 (413)
T PHA02875        121 LIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAK-GDIAICKMLLDSGANIDYFG-  198 (413)
T ss_pred             HHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHhCCCCCCcCC-
Confidence            9999998888888899999999999999999999999999998899999999999988 88999999999999998888 


Q ss_pred             CCC-CCHhHHHHhCCChhHHHHHHhhhhccccC---CCCCCCchhhHHHHh
Q psy15068        617 KTG-KTPLKHAEAGKNRDIIDLLHLIDNLFASV---TNPYDPNVYHRIELM  663 (710)
Q Consensus       617 ~~g-~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~---~~~g~t~L~~~A~~~  663 (710)
                      ..| .||+|+|+..|+.+++++|+++|+|+|..   +..|.||+ ++++..
T Consensus       199 ~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~~~~~~~~~t~l-~~~~~~  248 (413)
T PHA02875        199 KNGCVAALCYAIENNKIDIVRLFIKRGADCNIMFMIEGEECTIL-DMICNM  248 (413)
T ss_pred             CCCCchHHHHHHHcCCHHHHHHHHHCCcCcchHhhcCCCchHHH-HHHHhh
Confidence            555 57888899999999999999999988865   56788888 776543

>PHA02798 ankyrin-like protein; Provisional

Probab=100.00  E-value=3.8e-35  Score=304.21  Aligned_cols=293  Identities=22%  Similarity=0.265  Sum_probs=194.8

Q ss_pred             cHHHHHHHHccCCCccccCCCCCCcHHHHHHH--cCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHh
Q psy15068        242 SVKIVEAFLNSKNFDVSISDGDLNSLLHKACH--VGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLL  319 (710)
Q Consensus       242 ~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~--~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll  319 (710)
                      ..+.|+ +|.+.+ +++.. ..+.|+++.+..  .++.++|++|+++|++++..+..|.|||+.++.....         
T Consensus        17 ~~~~v~-~ll~~~-~~~~~-~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~---------   84 (489)
T PHA02798         17 KLSTVK-LLIKSC-NPNEI-VNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKD---------   84 (489)
T ss_pred             cHHHHH-HHHhcC-Chhhh-cccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHh---------
Confidence            567788 444443 33332 335566653333  4578888888888888888888888888877643100         


Q ss_pred             hcccccCCCCCCCCcchhhhhhccCCcccccHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC---CHHHHHH
Q psy15068        320 QQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHC---DLQSAKY  396 (710)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~---~~~~~~~  396 (710)
                                                        ..+..+++++|+++|+++|.++..|.||||+|+..+   +.+++++
T Consensus        85 ----------------------------------~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~  130 (489)
T PHA02798         85 ----------------------------------YKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLF  130 (489)
T ss_pred             ----------------------------------HHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHH
Confidence                                              001127777777788888888888888888888875   6788888


Q ss_pred             HHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCc---HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCC--
Q psy15068        397 LIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNN---IEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGD--  471 (710)
Q Consensus       397 Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~---~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~--  471 (710)
                      |+++|++++..+..             |.||||+|+.. ++   .+++++|+++|++++...+..|.||||.++..+.  
T Consensus       131 Ll~~Gadvn~~d~~-------------g~tpL~~a~~~-~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~  196 (489)
T PHA02798        131 MIENGADTTLLDKD-------------GFTMLQVYLQS-NHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDR  196 (489)
T ss_pred             HHHcCCCccccCCC-------------CCcHHHHHHHc-CCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhcccc
Confidence            88888888877776             88888888887 55   7888888888888877645567788888776543  


Q ss_pred             --HhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCC
Q psy15068        472 --FQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSE  549 (710)
Q Consensus       472 --~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~  549 (710)
                        .+++++|+++|++++..+  ..+.++  ++..               -..+.........+++++|+. ++++|.++.
T Consensus       197 ~~~~ivk~Li~~Ga~i~~~~--~~~~~~--~~~~---------------l~~l~~~~~~~~~~i~~~l~~-~~dvN~~d~  256 (489)
T PHA02798        197 IDADILKLFVDNGFIINKEN--KSHKKK--FMEY---------------LNSLLYDNKRFKKNILDFIFS-YIDINQVDE  256 (489)
T ss_pred             CCHHHHHHHHHCCCCcccCC--ccccch--HHHH---------------HHHHHhhcccchHHHHHHHHh-cCCCCCcCc
Confidence              467777777777776655  444444  2211               001111223344555555444 466777777


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCC
Q psy15068        550 RRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKD  615 (710)
Q Consensus       550 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~  615 (710)
                      .|.||||+|+..|+.+++++|+++|+|++.+|..|+||||+|+.. ++.++++.|++++++++...
T Consensus       257 ~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~-~~~~iv~~lL~~~~~~~~i~  321 (489)
T PHA02798        257 LGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFEN-ESKFIFNSILNKKPNKNTIS  321 (489)
T ss_pred             CCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHc-CcHHHHHHHHccCCCHHHHH
Confidence            777777777777777777777777777777777777777777766 66777777777766666543

>KOG4369|consensus

Probab=100.00  E-value=4e-35  Score=294.88  Aligned_cols=311  Identities=18%  Similarity=0.183  Sum_probs=279.1

Q ss_pred             cccHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCH
Q psy15068        348 VMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSA  427 (710)
Q Consensus       348 ~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~  427 (710)
                      .++.+...++.+++++|+.+|+++..+++.|.+||.+|+..|+..+|+.|+.+.++++.....            .+.|+
T Consensus       760 ~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdr------------tkdt~  827 (2131)
T KOG4369|consen  760 NLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDR------------TKDTM  827 (2131)
T ss_pred             cccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhccc------------ccCce
Confidence            344477778889999999999999999999999999999999999999999998888765433            37899


Q ss_pred             HHHHHHccCcHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHH
Q psy15068        428 LQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELE  507 (710)
Q Consensus       428 l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~  507 (710)
                      |.+||.. |+.++++.|+..|++-... +...+|||.+|..-|+.++++.|+..|++++.....+-|..|  |..+    
T Consensus       828 lSlacsg-gr~~vvelLl~~gankehr-nvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisP--Lmla----  899 (2131)
T KOG4369|consen  828 LSLACSG-GRTRVVELLLNAGANKEHR-NVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISP--LMLA----  899 (2131)
T ss_pred             EEEecCC-CcchHHHHHHHhhcccccc-chhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcch--hhhh----
Confidence            9999998 9999999999999987766 888899999999999999999999999999988766777788  7777    


Q ss_pred             HHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCccccc-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCc
Q psy15068        508 ERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVS-SERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT  586 (710)
Q Consensus       508 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t  586 (710)
                                        ..+++.+.++.|++.|.++|.. ..+..|+|.+|+..|+.+++.+||.+.+++..+-+.|.|
T Consensus       900 ------------------tmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktglt  961 (2131)
T KOG4369|consen  900 ------------------TMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLT  961 (2131)
T ss_pred             ------------------hhccccHHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCc
Confidence                              8889999999999999999976 446779999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCchHHHHHHHHcCCCCCCCC-CCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh
Q psy15068        587 ALHMACRFHSNDNIVRKLLHHGAYYDMKD-GKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS  665 (710)
Q Consensus       587 ~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~  665 (710)
                      ||+-++.. |..++=++|+..|+|.+... .....|+|.+++..|+...|+.|+...+.+..+|++|.|+| .+|+-.|+
T Consensus       962 plme~Asg-Gyvdvg~~li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv~v~NkkG~T~L-wla~~Gg~ 1039 (2131)
T KOG4369|consen  962 PLMEMASG-GYVDVGNLLIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDATVRVPNKKGCTVL-WLASAGGA 1039 (2131)
T ss_pred             ccchhhcC-CccccchhhhhcccccccCCCCCcCCccceeecCCCchhhhHHhhCCccceecccCCCCccc-chhccCCc
Confidence            99999998 99999999999999988753 14456999999999999999999999999999999999999 99999998


Q ss_pred             ---cccccceeehhHHHHhhhcccchhHHHHhhhchhHH
Q psy15068        666 ---AKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYSFL  701 (710)
Q Consensus       666 ---~~~L~~~~g~~~~~~~~~~~G~t~l~~a~~~~~~~~  701 (710)
                         +.+| +++++|+  +..|+.-.|++.-|.++|+-.+
T Consensus      1040 lss~~il-~~~~ad~--d~qdnr~~S~~maafRKgh~~i 1075 (2131)
T KOG4369|consen 1040 LSSCPIL-VSSVADA--DQQDNRTNSRTMAAFRKGHFAI 1075 (2131)
T ss_pred             cccchHH-hhcccCh--hhhhcccccccHHHHHhchhhe
Confidence               9999 9999999  9999999999999999999553

>KOG0509|consensus

Probab=100.00  E-value=5.8e-33  Score=267.94  Aligned_cols=206  Identities=26%  Similarity=0.327  Sum_probs=183.4

Q ss_pred             CCHHHHHHHccCcHHHHHHHHHC-CCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhh
Q psy15068        425 RSALQYACKHKNNIEMVKLLLLH-GADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHST  503 (710)
Q Consensus       425 ~t~l~~A~~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a  503 (710)
                      ..-+..|+++ |.++.++.|++. |.+++.. |.+|.|+||+|+.+++.+++++|+++|+++|...              
T Consensus        45 ~~~~v~A~q~-G~l~~v~~lve~~g~~v~~~-D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~g--------------  108 (600)
T KOG0509|consen   45 LDDIVKATQY-GELETVKELVESEGESVNNP-DREGVTLLHWAAINNRLDVARYLISHGADVNAIG--------------  108 (600)
T ss_pred             hhhhhhHhhc-chHHHHHHHHhhcCcCCCCC-CcCCccceeHHHHcCcHHHHHHHHHcCCCccccC--------------
Confidence            3456677777 888888888887 7777777 7788888888888888888888888877776543              


Q ss_pred             hhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCC
Q psy15068        504 TELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSAT  583 (710)
Q Consensus       504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~  583 (710)
                                                                  ..-+.||||+|+++|+..+|++|+++|||++.+|.+
T Consensus       109 --------------------------------------------G~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~  144 (600)
T KOG0509|consen  109 --------------------------------------------GVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQ  144 (600)
T ss_pred             --------------------------------------------CCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCC
Confidence                                                        134669999999999999999999999999999999


Q ss_pred             CCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCC-CCCCCchhhHHHH
Q psy15068        584 GFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVT-NPYDPNVYHRIEL  662 (710)
Q Consensus       584 g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~~A~~  662 (710)
                      |.||||.|++. ++.-+|-+|+.+|++++.+| .+|+||||.|+.+|....++.|++.|+.++.+| ..|+||| |+|+.
T Consensus       145 G~~~lHla~~~-~~~~~vayll~~~~d~d~~D-~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~TpL-Hwa~~  221 (600)
T KOG0509|consen  145 GLTPLHLAAQF-GHTALVAYLLSKGADIDLRD-NNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNTPL-HWAVV  221 (600)
T ss_pred             CCcHHHHHHHh-CchHHHHHHHHhcccCCCcC-CCCCCHHHHHHHhcccHHHHHHHHhcccccccccccCCchH-HHHHh
Confidence            99999999999 99999999999999999999 999999999999999988999999999999998 9999999 99999


Q ss_pred             hhh---cccccceeehhHHHHhhhcccchhHHHHhhh
Q psy15068        663 MNS---AKQLGLVHVFEIMKVVKNYAGETLIGVARKM  696 (710)
Q Consensus       663 ~~~---~~~L~~~~g~~~~~~~~~~~G~t~l~~a~~~  696 (710)
                      .|+   +.+| ++.|++.  +.+|.+|+||+.+|.++
T Consensus       222 ~gN~~~v~Ll-~~g~~~~--d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  222 GGNLTAVKLL-LEGGADL--DKTNTNGKTPFDLAQER  255 (600)
T ss_pred             cCCcceEehh-hhcCCcc--cccccCCCCHHHHHHHh
Confidence            999   6766 8888999  99999999999999887

>KOG0509|consensus

Probab=100.00  E-value=3.5e-32  Score=262.53  Aligned_cols=213  Identities=28%  Similarity=0.367  Sum_probs=188.7

Q ss_pred             ccccccchhhhhhcChhhHHHHHHhh-hccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCcccc-CCCCcHHHHH
Q psy15068         20 SSYRHHHLFSEIMFSEEDAFGYFLQG-IINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKL-QDGRTALYMA   97 (710)
Q Consensus        20 ~~~~~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~g~t~L~~A   97 (710)
                      ..+-.+.++.|+.+|.++-++.+++. |.+++..|.+|.|+||+|+.+|+++++++|+++|+ ++|... .-+.||||+|
T Consensus        41 ~d~~~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~ga-dvn~~gG~l~stPLHWA  119 (600)
T KOG0509|consen   41 EDSSLDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGA-DVNAIGGVLGSTPLHWA  119 (600)
T ss_pred             cchhhhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCC-CccccCCCCCCCcchHH
Confidence            44456888999999999999999998 99999999999999999999999999999999999 999887 6788999999


Q ss_pred             HHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHH
Q psy15068         98 ILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEI  177 (710)
Q Consensus        98 ~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~  177 (710)
                      +++|+..+|++|+++||+++.+|.+|.+|||.|++.|++-+|-||+.+|++++.+|.+|+|||++|+..+      ....
T Consensus       120 ar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg------~~~~  193 (600)
T KOG0509|consen  120 ARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKG------FALF  193 (600)
T ss_pred             HHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhc------ccHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999988      6666


Q ss_pred             HHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhc
Q psy15068        178 ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIES  240 (710)
Q Consensus       178 ~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~  240 (710)
                      +..|++-|+.+...+...|.||||+|+..|+..+++++++.|++.+..+..|.+| +..|.+.
T Consensus       194 v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp-~~LA~~~  255 (600)
T KOG0509|consen  194 VRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTP-FDLAQER  255 (600)
T ss_pred             HHHHHHhcccccccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCH-HHHHHHh
Confidence            8889999999888886689999999999999998887777777777777777777 7777666

>PHA02795 ankyrin-like protein; Provisional

Probab=99.96  E-value=9.9e-29  Score=238.34  Aligned_cols=243  Identities=18%  Similarity=0.128  Sum_probs=197.7

Q ss_pred             HHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHH--ccC
Q psy15068        359 QIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACK--HKN  436 (710)
Q Consensus       359 ~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~--~~~  436 (710)
                      -+.++++.+|.+++....++     +|+..+..+++++|+++|++++.....       -..+.+++|+||.++.  . +
T Consensus        63 ~~~~~~~~~~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~-------~~~~~~~~~~L~~~~~n~~-n  129 (437)
T PHA02795         63 VLYDYFRIHRDNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSII-------IKNCNSVQDLLLYYLSNAY-V  129 (437)
T ss_pred             HHHHHHHHcCcchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhh-------hhccccccHHHHHHHHhcC-C
Confidence            66789999999999888776     889999999999999999998832211       0122238999999999  7 9


Q ss_pred             cHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhh----ccchHHHHhhhhhhhHHHHHhh
Q psy15068        437 NIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENY----LKNKEAARIAHSTTELEERKKI  512 (710)
Q Consensus       437 ~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~----~~~~~~~~~l~~a~~~~~~~~~  512 (710)
                      +.+++++|+++|++++..   .+.||+|.|+..++.+++++|+++|++......    ...+.++  +|.+         
T Consensus       130 ~~eiV~~LI~~GADIn~~---~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~--l~~a---------  195 (437)
T PHA02795        130 EIDIVDFMVDHGAVIYKI---ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTR--GFLV---------  195 (437)
T ss_pred             CHHHHHHHHHCCCCCCCC---CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccch--hHHH---------
Confidence            999999999999999864   448999999999999999999999985322110    0112333  4555         


Q ss_pred             hHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHH
Q psy15068        513 NDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMAC  592 (710)
Q Consensus       513 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~  592 (710)
                                   ...+..+++++|+++|+++|.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus       196 -------------~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa  262 (437)
T PHA02795        196 -------------DEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAV  262 (437)
T ss_pred             -------------HhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence                         7788899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCC--------chHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccC
Q psy15068        593 RFHS--------NDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASV  648 (710)
Q Consensus       593 ~~~~--------~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~  648 (710)
                      .. |        +.+++++|+++|++++...    .+++...  ..+.++++.++++...++..
T Consensus       263 ~~-g~~~~~~~~~~eIvelLL~~gadI~~~~----~~~~~~~--~~n~~~ik~lI~y~~~ldy~  319 (437)
T PHA02795        263 DR-GSVIARRETHLKILEILLREPLSIDCIK----LAILNNT--IENHDVIKLCIKYFMMVDYS  319 (437)
T ss_pred             Hc-CCcccccccHHHHHHHHHhCCCCCCchh----HHhhhcc--cchHHHHHHHHHHHHhcccc
Confidence            98 5        4689999999999888665    2332221  22788999999988766543

>PHA02795 ankyrin-like protein; Provisional

Probab=99.96  E-value=1.2e-28  Score=237.82  Aligned_cols=206  Identities=15%  Similarity=0.118  Sum_probs=155.0

Q ss_pred             hHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCc------cccCCCCcHHHHHHH--cCcHHHHHH
Q psy15068         37 DAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVN------EKLQDGRTALYMAIL--QGLYKMVTL  108 (710)
Q Consensus        37 ~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~------~~~~~g~t~L~~A~~--~g~~~~v~~  108 (710)
                      -+.+||+.+|.++|....+|     .|+..+..|++++|+.+|+ +++      .++..++|+||+|+.  .|+.+++++
T Consensus        63 ~~~~~~~~~~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~-~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~  136 (437)
T PHA02795         63 VLYDYFRIHRDNIDQYIVDR-----LFAYITYKDIISALVSKNY-MEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDF  136 (437)
T ss_pred             HHHHHHHHcCcchhhhhhhh-----HHhhcchHHHHHHHHhccc-ccchhhhhhhccccccHHHHHHHHhcCCCHHHHHH
Confidence            35678889999999887777     8889999999999999999 877      788889999999999  889999999


Q ss_pred             HHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccc------cCCCchhHHhhhccCCCCCCHHHHHHHHH
Q psy15068        109 LIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKC------SMMVTPILAVSANMSEDSTDTNEIISMLI  182 (710)
Q Consensus       109 Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~------~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll  182 (710)
                      |+++||+++..  .+.||||+|+..|+.+++++|+++|++.....      ..+.++++.+...+      ..+++++|+
T Consensus       137 LI~~GADIn~~--~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~------~~eIve~LI  208 (437)
T PHA02795        137 MVDHGAVIYKI--ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPT------VLEIYKLCI  208 (437)
T ss_pred             HHHCCCCCCCC--CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcC------HHHHHHHHH
Confidence            99999999874  44799999999999999999999998543221      23455666666666      666666666


Q ss_pred             HcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCc--------HHHHHHHHccCC
Q psy15068        183 ENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNS--------VKIVEAFLNSKN  254 (710)
Q Consensus       183 ~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~--------~~~v~~lL~~~~  254 (710)
                      ++|++++.++. .|.||||.|+..|+.+++++|+++|++++..+..|.+| ||.|+..|+        .++++ +|.++|
T Consensus       209 s~GADIN~kD~-~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~Tp-Lh~Aa~~g~~~~~~~~~~eIve-lLL~~g  285 (437)
T PHA02795        209 PYIEDINQLDA-GGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTC-LDVAVDRGSVIARRETHLKILE-ILLREP  285 (437)
T ss_pred             hCcCCcCcCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCH-HHHHHHcCCcccccccHHHHHH-HHHhCC
Confidence            66666666665 66666666666666666666666666666666666666 666666652        45666 555566


Q ss_pred             Ccccc
Q psy15068        255 FDVSI  259 (710)
Q Consensus       255 ~~~~~  259 (710)
                      ++++.
T Consensus       286 adI~~  290 (437)
T PHA02795        286 LSIDC  290 (437)
T ss_pred             CCCCc
Confidence            55554

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.96  E-value=1.9e-29  Score=227.89  Aligned_cols=165  Identities=24%  Similarity=0.257  Sum_probs=149.2

Q ss_pred             hhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCcccC-CCCCcHHHHHHhc--CCchHH
Q psy15068        526 VRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKG--YEEIVDLLLDNGADVNFKS-ATGFTALHMACRF--HSNDNI  600 (710)
Q Consensus       526 ~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~--~~~~~~  600 (710)
                      +..++.+.++.|++.   ++..+..|.||||+|+..+  +.+++++|+++|++++.++ ..|.||||+|+..  .++.++
T Consensus        29 ~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~ei  105 (209)
T PHA02859         29 VEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEI  105 (209)
T ss_pred             HHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHH
Confidence            999999999999985   5678899999999999854  8999999999999999997 5899999998764  147899


Q ss_pred             HHHHHHcCCCCCCCCCCCCCCHhHHHHh--CCChhHHHHHHhhhhccccCCCCCCCchhhHH-HHhhh---cccccceee
Q psy15068        601 VRKLLHHGAYYDMKDGKTGKTPLKHAEA--GKNRDIIDLLHLIDNLFASVTNPYDPNVYHRI-ELMNS---AKQLGLVHV  674 (710)
Q Consensus       601 v~~Ll~~g~~~~~~~~~~g~t~L~~A~~--~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A-~~~~~---~~~L~~~~g  674 (710)
                      +++|+++|++++.++ ..|.||||.|+.  .++.+++++|++.|++++.+|..|.||| |.| +..++   +++| +++|
T Consensus       106 v~~Ll~~gadin~~d-~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~L-h~~a~~~~~~~iv~~L-l~~G  182 (209)
T PHA02859        106 LKILIDSGSSITEED-EDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNIL-YSYILFHSDKKIFDFL-TSLG  182 (209)
T ss_pred             HHHHHHCCCCCCCcC-CCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHH-HHHHHhcCCHHHHHHH-HHcC
Confidence            999999999999999 999999999876  4689999999999999999999999999 864 55555   8999 9999


Q ss_pred             hhHHHHhhhcccchhHHHHhhhch
Q psy15068        675 FEIMKVVKNYAGETLIGVARKMNY  698 (710)
Q Consensus       675 ~~~~~~~~~~~G~t~l~~a~~~~~  698 (710)
                      +++  +.+|..|.|||++|+.++.
T Consensus       183 adi--~~~d~~g~tpl~la~~~~~  204 (209)
T PHA02859        183 IDI--NETNKSGYNCYDLIKFRNL  204 (209)
T ss_pred             CCC--CCCCCCCCCHHHHHhhhhh
Confidence            999  9999999999999998764

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.96  E-value=1.2e-28  Score=222.69  Aligned_cols=133  Identities=23%  Similarity=0.213  Sum_probs=114.3

Q ss_pred             chHHHHHHHhcCCcccccC-CCCCcHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhc-CCchHHHHHH
Q psy15068        530 KYDEVKKNIEDGACVNVSS-ERRGSALIYVAWK---GYEEIVDLLLDNGADVNFKSATGFTALHMACRF-HSNDNIVRKL  604 (710)
Q Consensus       530 ~~~~~~~ll~~~~~~~~~~-~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~~v~~L  604 (710)
                      ..+++++|+++|++++.++ ..|.||||+|+..   ++.+++++|+++|++++.+|..|.||||+|+.. .++.+++++|
T Consensus        65 ~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~L  144 (209)
T PHA02859         65 NVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLL  144 (209)
T ss_pred             CHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHH
Confidence            4556666666666666665 4789999998764   478999999999999999999999999998864 2688999999


Q ss_pred             HHcCCCCCCCCCCCCCCHhHH-HHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhh
Q psy15068        605 LHHGAYYDMKDGKTGKTPLKH-AEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMN  664 (710)
Q Consensus       605 l~~g~~~~~~~~~~g~t~L~~-A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~  664 (710)
                      +++|++++.++ ..|.||||. |+..++.+++++|+++|++++.+|..|.||| |+|..++
T Consensus       145 i~~gadin~~d-~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~tpl-~la~~~~  203 (209)
T PHA02859        145 IDSGVSFLNKD-FDNNNILYSYILFHSDKKIFDFLTSLGIDINETNKSGYNCY-DLIKFRN  203 (209)
T ss_pred             HHcCCCccccc-CCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCHH-HHHhhhh
Confidence            99999999999 999999996 5678899999999999999999999999999 9998765

>KOG4369|consensus

Probab=99.96  E-value=6.9e-30  Score=257.52  Aligned_cols=326  Identities=18%  Similarity=0.229  Sum_probs=302.3

Q ss_pred             ccccccccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCcc-ccCCCCcHHHH
Q psy15068         18 KESSYRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNE-KLQDGRTALYM   96 (710)
Q Consensus        18 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~g~t~L~~   96 (710)
                      ..++...|+|..||..|+.+++..|+..|+++..+|+.|.+||..|+..|+..+|+.|+++.+ ++.. .|..+.|+|-+
T Consensus       752 ~Te~n~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha-~veaQsdrtkdt~lSl  830 (2131)
T KOG4369|consen  752 LTEPNIKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHA-DVEAQSDRTKDTMLSL  830 (2131)
T ss_pred             ccCccccccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhh-hhhhhcccccCceEEE
Confidence            446677899999999999999999999999999999999999999999999999999999998 7775 47789999999


Q ss_pred             HHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccc--cCCCchhHHhhhccCCCCCCH
Q psy15068         97 AILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKC--SMMVTPILAVSANMSEDSTDT  174 (710)
Q Consensus        97 A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~--~~~~~~l~~a~~~~~~~~~~~  174 (710)
                      ||..|+.++|++||..|++-..++-...|||.+|...|..++|+.|+.+|++++.+.  ..|.+||.+|..+|      +
T Consensus       831 acsggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmng------h  904 (2131)
T KOG4369|consen  831 ACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNG------H  904 (2131)
T ss_pred             ecCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhcc------c
Confidence            999999999999999999998899899999999999999999999999999888764  56789999999999      9


Q ss_pred             HHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCC
Q psy15068        175 NEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKN  254 (710)
Q Consensus       175 ~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~  254 (710)
                      .+.++.|++.|.+++...+.+.+|+|..|+..|+.+++.+||.+.+++......|-+| |+.++..|.+++=. +|+..|
T Consensus       905 ~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltp-lme~AsgGyvdvg~-~li~~g  982 (2131)
T KOG4369|consen  905 QAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTP-LMEMASGGYVDVGN-LLIAAG  982 (2131)
T ss_pred             cHHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcc-cchhhcCCccccch-hhhhcc
Confidence            9999999999999999988788999999999999999999999999999888999999 99999999999999 999999


Q ss_pred             CccccCC--CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCC
Q psy15068        255 FDVSISD--GDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKR  332 (710)
Q Consensus       255 ~~~~~~~--~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~  332 (710)
                      +|++...  ....|+|..++..|+...|..|+...+.+..++..|.|+|..|+..|..                      
T Consensus       983 ad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~l---------------------- 1040 (2131)
T KOG4369|consen  983 ADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGAL---------------------- 1040 (2131)
T ss_pred             cccccCCCCCcCCccceeecCCCchhhhHHhhCCccceecccCCCCcccchhccCCcc----------------------
Confidence            9988654  3456999999999999999999999999999999999999999999988                      


Q ss_pred             CcchhhhhhccCCcccccHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy15068        333 PNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQK  400 (710)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~  400 (710)
                                                ..+..|++++++++..+....++++.|.+.|++++|+|++..
T Consensus      1041 --------------------------ss~~il~~~~ad~d~qdnr~~S~~maafRKgh~~iVk~mv~~ 1082 (2131)
T KOG4369|consen 1041 --------------------------SSCPILVSSVADADQQDNRTNSRTMAAFRKGHFAIVKKMVPP 1082 (2131)
T ss_pred             --------------------------ccchHHhhcccChhhhhcccccccHHHHHhchhheeccccCc
Confidence                                      666777778999999998888999999999999999999864

>KOG0502|consensus

Probab=99.95  E-value=2e-28  Score=202.21  Aligned_cols=233  Identities=21%  Similarity=0.144  Sum_probs=205.2

Q ss_pred             cCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhh
Q psy15068        424 FRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHST  503 (710)
Q Consensus       424 ~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a  503 (710)
                      |..-+..+... ++.++......-.++....++..|+.+++.++-+++.+.+..++.+|+..+..+  ..+++|  +..+
T Consensus        62 ge~~~~~~~~s-~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs--~~p~s~--~sls  136 (296)
T KOG0502|consen   62 GESLLTVAVRS-GNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVS--LMPWSP--LSLS  136 (296)
T ss_pred             CCcccchhhhc-CCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCccc--cccCCh--hhHH
Confidence            44445556666 788888877777777665558889999999999999999999999999988877  677777  5555


Q ss_pred             hhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCC
Q psy15068        504 TELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSAT  583 (710)
Q Consensus       504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~  583 (710)
                                            +...+++.+..+.++  .+|..|..|.|||.||+..|+..+|++|++.|+|+++..+.
T Consensus       137 ----------------------Vhql~L~~~~~~~~n--~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~  192 (296)
T KOG0502|consen  137 ----------------------VHQLHLDVVDLLVNN--KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKY  192 (296)
T ss_pred             ----------------------HHHHHHHHHHHHhhc--cccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhh
Confidence                                  445566666666664  47899999999999999999999999999999999999999


Q ss_pred             CCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHh
Q psy15068        584 GFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELM  663 (710)
Q Consensus       584 g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~  663 (710)
                      ..++|.+|++. |..++|++||.++.|+|..| ++|-|||-+|++.++.++++.|++.|+|+++.+..|.+++ ..|+..
T Consensus       193 resALsLAt~g-gytdiV~lLL~r~vdVNvyD-wNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~m-dlAVal  269 (296)
T KOG0502|consen  193 RESALSLATRG-GYTDIVELLLTREVDVNVYD-WNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIM-DLAVAL  269 (296)
T ss_pred             hhhhHhHHhcC-ChHHHHHHHHhcCCCcceec-cCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHH-HHHHHh
Confidence            99999999998 99999999999999999999 9999999999999999999999999999999999999999 999999


Q ss_pred             hh--cccccceeehhHHHHhhhcccchhHH
Q psy15068        664 NS--AKQLGLVHVFEIMKVVKNYAGETLIG  691 (710)
Q Consensus       664 ~~--~~~L~~~~g~~~~~~~~~~~G~t~l~  691 (710)
                      |+  |+.. ++.-+..  +.+|..-.||+|
T Consensus       270 Gyr~Vqqv-ie~h~lk--l~Q~~~~~~~~~  296 (296)
T KOG0502|consen  270 GYRIVQQV-IEKHALK--LCQDSEKRTPLH  296 (296)
T ss_pred             hhHHHHHH-HHHHHHH--HhhcccCCCCCC
Confidence            99  8888 8888888  899988888876

>KOG0507|consensus

Probab=99.94  E-value=4e-26  Score=223.46  Aligned_cols=246  Identities=21%  Similarity=0.236  Sum_probs=187.0

Q ss_pred             ccchhhhhhcChhhHHHHHHhhh-------------ccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCC
Q psy15068         24 HHHLFSEIMFSEEDAFGYFLQGI-------------INSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDG   90 (710)
Q Consensus        24 ~~~l~~a~~~~~~~~~~~ll~~~-------------~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g   90 (710)
                      .+-+..|++.|+.+.+..|++..             .+.|..|.+|.|+||.|+.+|+.++++.|++..+ -++..+..|
T Consensus         4 ~qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea-~ldl~d~kg   82 (854)
T KOG0507|consen    4 KQELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEA-LLDLCDTKG   82 (854)
T ss_pred             hhhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchh-hhhhhhccC
Confidence            35578899999999999999732             4578889999999999999999999999999999 899999999


Q ss_pred             CcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCC
Q psy15068         91 RTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSED  170 (710)
Q Consensus        91 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~  170 (710)
                      .+|||+|+..|+.+++++|+.++..+|..+..|.||||.|++.||.++|++|+++|++.-.++..+.|++..|++.|   
T Consensus        83 ~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfg---  159 (854)
T KOG0507|consen   83 ILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFG---  159 (854)
T ss_pred             cceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhh---
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999   


Q ss_pred             CCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHH
Q psy15068        171 STDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFL  250 (710)
Q Consensus       171 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL  250 (710)
                         ..++++.|++...+...                        +...|  -...+-....+ +|.|+.+|+.++++ .|
T Consensus       160 ---r~~Vvq~ll~~~~~~~~------------------------~~~~~--~~~~~~~~~~p-lHlaakngh~~~~~-~l  208 (854)
T KOG0507|consen  160 ---RAEVVQMLLQKKFPVQS------------------------SLRVG--DIKRPFPAIYP-LHLAAKNGHVECMQ-AL  208 (854)
T ss_pred             ---hhHHHHHHhhhccchhh------------------------cccCC--CCCCCCCCcCC-cchhhhcchHHHHH-HH
Confidence               99999999987332211                        11111  00111112222 55555555555555 44


Q ss_pred             ccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHH
Q psy15068        251 NSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAI  305 (710)
Q Consensus       251 ~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~  305 (710)
                      ...|++++.....| |+||.|+..|..++|.+|++.|.+...++.+|+|+|.+..
T Consensus       209 l~ag~din~~t~~g-talheaalcgk~evvr~ll~~gin~h~~n~~~qtaldil~  262 (854)
T KOG0507|consen  209 LEAGFDINYTTEDG-TALHEAALCGKAEVVRFLLEIGINTHIKNQHGQTALDIII  262 (854)
T ss_pred             HhcCCCcccccccc-hhhhhHhhcCcchhhhHHHhhccccccccccchHHHHHHH
Confidence            55555555555444 5555555555555555555555555555555555555444

>KOG0502|consensus

Probab=99.93  E-value=1.1e-26  Score=191.87  Aligned_cols=262  Identities=22%  Similarity=0.245  Sum_probs=202.5

Q ss_pred             chhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHH
Q psy15068         26 HLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKM  105 (710)
Q Consensus        26 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~  105 (710)
                      .++.+...+-...-..+..-.-  -.....|...+-.|...|+.+++..+....+..+...+++|+++++.|+-.|+.+.
T Consensus        34 ~~~~~~~m~~t~p~~~l~~~~s--~~~~~lge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k  111 (296)
T KOG0502|consen   34 ELFEQVEMGTTEPRCALTAEIS--ALRNALGESLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDK  111 (296)
T ss_pred             HHHHHhhccccchhHHHHHHHH--HHHHhcCCcccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcce
Confidence            3444444444444444443110  01122355566677888888888888877775677778889999999999999999


Q ss_pred             HHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcC
Q psy15068        106 VTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENG  185 (710)
Q Consensus       106 v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~  185 (710)
                      +..++.+|+..|..+--+.+|+.+++...+.+++..+.++  .+|..|..|.|||.+|+..|      +.++|++|++.|
T Consensus       112 ~sttltN~~rgnevs~~p~s~~slsVhql~L~~~~~~~~n--~VN~~De~GfTpLiWAaa~G------~i~vV~fLL~~G  183 (296)
T KOG0502|consen  112 VSTTLTNGARGNEVSLMPWSPLSLSVHQLHLDVVDLLVNN--KVNACDEFGFTPLIWAAAKG------HIPVVQFLLNSG  183 (296)
T ss_pred             eeeeecccccCCccccccCChhhHHHHHHHHHHHHHHhhc--cccCccccCchHhHHHHhcC------chHHHHHHHHcC
Confidence            9999999999999988899999999988888888777764  56778888888888888888      888888888888


Q ss_pred             CCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCC
Q psy15068        186 ANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLN  265 (710)
Q Consensus       186 ~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~  265 (710)
                      ++++.... ...++|..|++.|..++|++|++++.++|..|-.|.+| |-+|++.++.++++ .|+..|++++..+..|+
T Consensus       184 Adp~~lgk-~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTp-LlyAvrgnhvkcve-~Ll~sGAd~t~e~dsGy  260 (296)
T KOG0502|consen  184 ADPDALGK-YRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTP-LLYAVRGNHVKCVE-SLLNSGADVTQEDDSGY  260 (296)
T ss_pred             CChhhhhh-hhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCce-eeeeecCChHHHHH-HHHhcCCCcccccccCC
Confidence            88877766 77788888888888888888888888888888888888 88888888888888 77788888888888888


Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChH
Q psy15068        266 SLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPM  301 (710)
Q Consensus       266 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l  301 (710)
                      +++..|+..|.. +|+..+++-+.....+...++|+
T Consensus       261 ~~mdlAValGyr-~Vqqvie~h~lkl~Q~~~~~~~~  295 (296)
T KOG0502|consen  261 WIMDLAVALGYR-IVQQVIEKHALKLCQDSEKRTPL  295 (296)
T ss_pred             cHHHHHHHhhhH-HHHHHHHHHHHHHhhcccCCCCC
Confidence            888888888877 77777776555555555555554

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.92  E-value=1.6e-24  Score=237.45  Aligned_cols=165  Identities=16%  Similarity=0.143  Sum_probs=141.5

Q ss_pred             hhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHH
Q psy15068        526 VRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLL  605 (710)
Q Consensus       526 ~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll  605 (710)
                      +..++.++++.|++.|+++|..|..|.||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+.. |+.+++++|+
T Consensus       533 a~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~-g~~~iv~~L~  611 (823)
T PLN03192        533 ASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISA-KHHKIFRILY  611 (823)
T ss_pred             HHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHh-CCHHHHHHHH
Confidence            778888888888888888888888899999999999999999999999999988888899999999988 8899999888


Q ss_pred             HcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh---cccccceeehhHHHHhh
Q psy15068        606 HHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS---AKQLGLVHVFEIMKVVK  682 (710)
Q Consensus       606 ~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~~~~~~~~  682 (710)
                      +.++..+.   ..|.+|||.|+..|+.+++++|+++|+|+|.+|..|+||| |+|+..|+   +++| +++||++  +.+
T Consensus       612 ~~~~~~~~---~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpL-h~A~~~g~~~iv~~L-l~~GAdv--~~~  684 (823)
T PLN03192        612 HFASISDP---HAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATAL-QVAMAEDHVDMVRLL-IMNGADV--DKA  684 (823)
T ss_pred             hcCcccCc---ccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHH-HHHHHCCcHHHHHHH-HHcCCCC--CCC
Confidence            87765442   4567889999999999999999999999999999999999 99988888   8888 8899998  888


Q ss_pred             hccc-chhHHHHhhhch
Q psy15068        683 NYAG-ETLIGVARKMNY  698 (710)
Q Consensus       683 ~~~G-~t~l~~a~~~~~  698 (710)
                      |..| .||++++.....
T Consensus       685 ~~~g~~t~~~l~~~~~~  701 (823)
T PLN03192        685 NTDDDFSPTELRELLQK  701 (823)
T ss_pred             CCCCCCCHHHHHHHHHH
Confidence            8888 888888765443

>KOG0507|consensus

Probab=99.91  E-value=4.7e-24  Score=209.11  Aligned_cols=226  Identities=26%  Similarity=0.237  Sum_probs=198.7

Q ss_pred             hHHHHHHhcCCHHHHHHHHhcCC------------CCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCC
Q psy15068         58 TLLCSAVWDNKIREVEFLLSTGD------------HDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYT  125 (710)
Q Consensus        58 t~L~~A~~~g~~~~v~~Ll~~~~------------~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t  125 (710)
                      +=|..|++.|+.+.+..|++...            ...+..|.+|.|+||.|+.+|+.+++++|++..+-++..|..|.+
T Consensus         5 qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~   84 (854)
T KOG0507|consen    5 QELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGIL   84 (854)
T ss_pred             hhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcc
Confidence            55788999999999999998743            367788899999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHH
Q psy15068        126 PLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVV  205 (710)
Q Consensus       126 ~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~  205 (710)
                      |||+|+.+|+.++++.|+.++..+|..+..|.+|||.+++.+      +.+++.+|+++|++....++ ++.|++..|++
T Consensus        85 plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhg------h~dvv~~Ll~~~adp~i~nn-s~~t~ldlA~q  157 (854)
T KOG0507|consen   85 PLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHG------HLEVVFYLLKKNADPFIRNN-SKETVLDLASR  157 (854)
T ss_pred             eEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhc------chHHHHHHHhcCCCccccCc-ccccHHHHHHH
Confidence            999999999999999999999999999999999999999999      99999999999999999988 99999999999


Q ss_pred             hCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy15068        206 KKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVK  285 (710)
Q Consensus       206 ~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~  285 (710)
                      .|..++++.|++.....              +           ++...|  -...+..+.+|||.|+++|+.++++.|++
T Consensus       158 fgr~~Vvq~ll~~~~~~--------------~-----------~~~~~~--~~~~~~~~~~plHlaakngh~~~~~~ll~  210 (854)
T KOG0507|consen  158 FGRAEVVQMLLQKKFPV--------------Q-----------SSLRVG--DIKRPFPAIYPLHLAAKNGHVECMQALLE  210 (854)
T ss_pred             hhhhHHHHHHhhhccch--------------h-----------hcccCC--CCCCCCCCcCCcchhhhcchHHHHHHHHh
Confidence            99999999999862111              1           111222  34456667799999999999999999999


Q ss_pred             cCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhh
Q psy15068        286 RKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQ  320 (710)
Q Consensus       286 ~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~  320 (710)
                      .|.+++..... .|+||.|+.+|..  +++.+|++
T Consensus       211 ag~din~~t~~-gtalheaalcgk~--evvr~ll~  242 (854)
T KOG0507|consen  211 AGFDINYTTED-GTALHEAALCGKA--EVVRFLLE  242 (854)
T ss_pred             cCCCccccccc-chhhhhHhhcCcc--hhhhHHHh
Confidence            99999977654 5889999999988  66666665

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.91  E-value=5.2e-24  Score=232.87  Aligned_cols=268  Identities=21%  Similarity=0.124  Sum_probs=209.5

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHc--CCCCCchhhhhhhhhccccCccccCCHHH-HHHHccCcHHHHHHHHHCCCCCCC
Q psy15068        377 DMITPLLFAAKHCDLQSAKYLIQK--GANVNLTETQKAFISDARSSDFCFRSALQ-YACKHKNNIEMVKLLLLHGADVND  453 (710)
Q Consensus       377 ~~~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~~~~~~~~~~~~~~~~t~l~-~A~~~~~~~~~~~~Ll~~~~~~~~  453 (710)
                      .+..+++.|+..|+.+.++.+++.  +.++|..+..             |+|||| .|+.. ++.+++++|+++|.    
T Consensus        16 ~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~-------------G~t~Lh~~A~~~-~~~eiv~lLl~~g~----   77 (743)
T TIGR00870        16 DEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRL-------------GRSALFVAAIEN-ENLELTELLLNLSC----   77 (743)
T ss_pred             HHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCcc-------------chhHHHHHHHhc-ChHHHHHHHHhCCC----
Confidence            556899999999999999999998  8888876666             999999 77776 99999999999997    


Q ss_pred             CCCCCCCCHHHHHHHcC---CHhHHHHHHHcCCCC------Cc--hhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHH
Q psy15068        454 TSNKPKQKPLAVAIQSG---DFQIVKELQNYGAQI------DK--ENYLKNKEAARIAHSTTELEERKKINDLLKLNLDF  522 (710)
Q Consensus       454 ~~~~~~~t~L~~A~~~~---~~~~v~~Ll~~~~~~------~~--~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~  522 (710)
                      . +..|.||||.|+..+   ...++..+...+.+.      +.  ......|.+|  +|.|                   
T Consensus        78 ~-~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~Tp--LhlA-------------------  135 (743)
T TIGR00870        78 R-GAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITA--LHLA-------------------  135 (743)
T ss_pred             C-CCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcH--HHHH-------------------
Confidence            2 677999999998732   234444444444221      00  0111468899  9999                   


Q ss_pred             HHhhhcCchHHHHHHHhcCCcccccC--------------CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHH
Q psy15068        523 LKNVRSNKYDEVKKNIEDGACVNVSS--------------ERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTAL  588 (710)
Q Consensus       523 ~~~~~~~~~~~~~~ll~~~~~~~~~~--------------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L  588 (710)
                         +..++.++++.|+++|++++.++              ..|.||||.|+..|+.+++++|+++|+|++.+|..|+|||
T Consensus       136 ---a~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~L  212 (743)
T TIGR00870       136 ---AHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLL  212 (743)
T ss_pred             ---HHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHH
Confidence               99999999999999999998653              2589999999999999999999999999999999999999


Q ss_pred             HHHHhcCC---------chHHHHHHHHcCCCC-------CCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCC
Q psy15068        589 HMACRFHS---------NDNIVRKLLHHGAYY-------DMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPY  652 (710)
Q Consensus       589 ~~A~~~~~---------~~~~v~~Ll~~g~~~-------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g  652 (710)
                      |+|+.. +         ...+.+++++.++..       +..| .+|.||||+|+..|+.+++++|++.+.........+
T Consensus       213 h~A~~~-~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N-~~g~TPL~~A~~~g~~~l~~lLL~~~~~~kk~~a~~  290 (743)
T TIGR00870       213 HLLVME-NEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILN-HQGLTPLKLAAKEGRIVLFRLKLAIKYKQKKFVAWP  290 (743)
T ss_pred             HHHHhh-hhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcC-CCCCCchhhhhhcCCccHHHHHHHHHHhcceeeccC
Confidence            999987 5         234666676666554       5567 999999999999999999999999887766667777


Q ss_pred             CCchhhHHHHhhh-----------cccccceeehhH-HHHhhhcccchhHH
Q psy15068        653 DPNVYHRIELMNS-----------AKQLGLVHVFEI-MKVVKNYAGETLIG  691 (710)
Q Consensus       653 ~t~L~~~A~~~~~-----------~~~L~~~~g~~~-~~~~~~~~G~t~l~  691 (710)
                      ..|. +.+...-.           ++++ +..++.. .+...+..+.+|+.
T Consensus       291 ~~~~-~~~~~~~~~~~~~~~~~~~~~ll-~~~~~~~~~p~~~~~~~~~P~~  339 (743)
T TIGR00870       291 NGQQ-LLSLYWLEELDGWRRKQSVLELI-VVFVIGLKFPELSDMYLIAPLS  339 (743)
T ss_pred             cchH-hHhhhccccCCcccccccHHHHH-HHHHHhhcChHHHHHHHHhhhH
Confidence            8888 76665421           4555 5555433 12555566666665

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>KOG0514|consensus

Probab=99.91  E-value=1.8e-24  Score=193.19  Aligned_cols=156  Identities=21%  Similarity=0.284  Sum_probs=142.7

Q ss_pred             ccccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCcHHHHHHhc----CCchHHHHHHHHcCCCCCCCCCCC
Q psy15068        544 VNVSSERRGSALIYVAWKGYEEIVDLLLDNG-ADVNFKSATGFTALHMACRF----HSNDNIVRKLLHHGAYYDMKDGKT  618 (710)
Q Consensus       544 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~----~~~~~~v~~Ll~~g~~~~~~~~~~  618 (710)
                      +|..|.+|.|+||||+..+++++|+.||+.| ++++..|+-|+||+++|+..    ....++|..|.+.| ++|.+-.+.
T Consensus       261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~  339 (452)
T KOG0514|consen  261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQH  339 (452)
T ss_pred             hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhh
Confidence            6788999999999999999999999999997 89999999999999999754    14567888888886 677776699


Q ss_pred             CCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh---cccccce-eehhHHHHhhhcccchhHHHHh
Q psy15068        619 GKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS---AKQLGLV-HVFEIMKVVKNYAGETLIGVAR  694 (710)
Q Consensus       619 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~---~~~L~~~-~g~~~~~~~~~~~G~t~l~~a~  694 (710)
                      |+|+|++|+..|+.++|+.|+..|+|+|.+|.+|-|+| +.||..||   +++| +. +++|+  .+.|.||-|+|.+|.
T Consensus       340 gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTAL-MCA~EHGhkEivklL-LA~p~cd~--sLtD~DgSTAl~IAl  415 (452)
T KOG0514|consen  340 GQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTAL-MCAAEHGHKEIVKLL-LAVPSCDI--SLTDVDGSTALSIAL  415 (452)
T ss_pred             cchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHH-hhhhhhChHHHHHHH-hccCcccc--eeecCCCchhhhhHH
Confidence            99999999999999999999999999999999999999 99999999   7888 76 58999  999999999999999


Q ss_pred             hhchhHHHHH
Q psy15068        695 KMNYSFLERL  704 (710)
Q Consensus       695 ~~~~~~~~~~  704 (710)
                      +.||+++..+
T Consensus       416 eagh~eIa~m  425 (452)
T KOG0514|consen  416 EAGHREIAVM  425 (452)
T ss_pred             hcCchHHHHH
Confidence            9999997764

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.91  E-value=2.3e-23  Score=227.79  Aligned_cols=252  Identities=19%  Similarity=0.166  Sum_probs=178.6

Q ss_pred             cccccchhhhhhcChhhHHHHHHhh--hccCCCccccchhHHH-HHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHH
Q psy15068         21 SYRHHHLFSEIMFSEEDAFGYFLQG--IINSSSAKSVELTLLC-SAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMA   97 (710)
Q Consensus        21 ~~~~~~l~~a~~~~~~~~~~~ll~~--~~~~~~~~~~~~t~L~-~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A   97 (710)
                      +..+..|..|+..|+.+.++.+++.  +.++|..|..|+|||| .|+.+++.++++.|++.++     .+..|.||||.|
T Consensus        15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~-----~~~~G~T~Lh~A   89 (743)
T TIGR00870        15 SDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC-----RGAVGDTLLHAI   89 (743)
T ss_pred             CHHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC-----CCCcChHHHHHH
Confidence            3456888888899999999888888  8888888888889998 8888888888888888875     566788899988


Q ss_pred             HHc---CcHHHHHHHHHcCCC------CC----CCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhh
Q psy15068         98 ILQ---GLYKMVTLLIHHGAN------VN----DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVS  164 (710)
Q Consensus        98 ~~~---g~~~~v~~Ll~~g~~------~~----~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~  164 (710)
                      +..   +..++++.+.+.+.+      ++    .....|.||||+|+.+|+.++|++|+++|++++.++.....      
T Consensus        90 ~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~------  163 (743)
T TIGR00870        90 SLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFF------  163 (743)
T ss_pred             HhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchh------
Confidence            872   223344444443321      11    12346888888888888888888888888888744321100      


Q ss_pred             hccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcC---
Q psy15068        165 ANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESN---  241 (710)
Q Consensus       165 ~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~---  241 (710)
                                   .   ...+.+   . ...|.+||+.|+..|+.+++++|++.|++++..+..+.++ ||.|+..+   
T Consensus       164 -------------~---~~~~~~---~-~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~-Lh~A~~~~~~~  222 (743)
T TIGR00870       164 -------------V---KSQGVD---S-FYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTL-LHLLVMENEFK  222 (743)
T ss_pred             -------------h---cCCCCC---c-ccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHH-HHHHHhhhhhh
Confidence                         0   000000   0 1167889999999999999999999999999888888887 99998886   


Q ss_pred             --c----HHHHHHHHccCCCc---c----ccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHH
Q psy15068        242 --S----VKIVEAFLNSKNFD---V----SISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAI  305 (710)
Q Consensus       242 --~----~~~v~~lL~~~~~~---~----~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~  305 (710)
                        +    ..+.+ ++...+..   .    +..|.+|.|||+.|+..|+.+++++|++.+.+..........|.+.+.
T Consensus       223 ~~~~~l~~~~~~-~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~~~~kk~~a~~~~~~~~~~  298 (743)
T TIGR00870       223 AEYEELSCQMYN-FALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIKYKQKKFVAWPNGQQLLSL  298 (743)
T ss_pred             HHHHHHHHHHHH-HHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHHHhcceeeccCcchHhHhh
Confidence              2    22333 44333333   2    567889999999999999999999999966554443444444544443

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.90  E-value=7.9e-23  Score=224.24  Aligned_cols=163  Identities=22%  Similarity=0.210  Sum_probs=78.7

Q ss_pred             chhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCC
Q psy15068         56 ELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGN  135 (710)
Q Consensus        56 ~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~  135 (710)
                      +.++|+.||..|+.++++.|++.|+ ++|..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus       525 ~~~~L~~Aa~~g~~~~l~~Ll~~G~-d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~  603 (823)
T PLN03192        525 MASNLLTVASTGNAALLEELLKAKL-DPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKH  603 (823)
T ss_pred             chhHHHHHHHcCCHHHHHHHHHCCC-CCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCC
Confidence            3445555555555555555555555 555555555555555555555555555555555555555555555555555555


Q ss_pred             HHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHH
Q psy15068        136 KNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELL  215 (710)
Q Consensus       136 ~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~L  215 (710)
                      .+++++|++.++..+.  ..+.++|+.|+..+      +.+++++|+++|++++..+. .|.||||.|+..|+.+++++|
T Consensus       604 ~~iv~~L~~~~~~~~~--~~~~~~L~~Aa~~g------~~~~v~~Ll~~Gadin~~d~-~G~TpLh~A~~~g~~~iv~~L  674 (823)
T PLN03192        604 HKIFRILYHFASISDP--HAAGDLLCTAAKRN------DLTAMKELLKQGLNVDSEDH-QGATALQVAMAEDHVDMVRLL  674 (823)
T ss_pred             HHHHHHHHhcCcccCc--ccCchHHHHHHHhC------CHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHCCcHHHHHHH
Confidence            5555555544433221  12334444444444      44444444444444444433 444444444444444444444


Q ss_pred             HhCCCCcchhhcc
Q psy15068        216 IKCKADTNLIVKV  228 (710)
Q Consensus       216 l~~g~~~~~~~~~  228 (710)
                      +++|++++..+..
T Consensus       675 l~~GAdv~~~~~~  687 (823)
T PLN03192        675 IMNGADVDKANTD  687 (823)
T ss_pred             HHcCCCCCCCCCC
Confidence            4444444444333

>KOG0505|consensus

Probab=99.90  E-value=3.1e-23  Score=196.27  Aligned_cols=231  Identities=26%  Similarity=0.313  Sum_probs=186.1

Q ss_pred             hHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHH
Q psy15068         58 TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKN  137 (710)
Q Consensus        58 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~  137 (710)
                      -.+..|+..|+.+-|+.|+..|+ .++..+.+|.|+||-||...+.+||++|+++|++||..|..++||||.|+..||..
T Consensus        42 a~~l~A~~~~d~~ev~~ll~~ga-~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~  120 (527)
T KOG0505|consen   42 AVFLEACSRGDLEEVRKLLNRGA-SPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLN  120 (527)
T ss_pred             HHHHhccccccHHHHHHHhccCC-CccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHH
Confidence            35667888889999999999988 88888999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHH-cCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHH
Q psy15068        138 IVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIE-NGANVREKMPFTDFSPLHFAVVKKNLSVVELLI  216 (710)
Q Consensus       138 iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~-~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll  216 (710)
                      ++++|+.+|+++...+..|..|+..+....      ..+++..-.. .|++++........+-|        .++ ...+
T Consensus       121 i~~~li~~gA~~~avNsdg~~P~dl~e~ea------~~~~l~~~~~r~gi~iea~R~~~e~~ml--------~D~-~q~l  185 (527)
T KOG0505|consen  121 IVEYLIQHGANLLAVNSDGNMPYDLAEDEA------TLDVLETEMARQGIDIEAARKAEEQTML--------DDA-RQWL  185 (527)
T ss_pred             HHHHHHHhhhhhhhccCCCCCccccccCcc------hhHHHHHHHHHhcccHHHHhhhhHHHHH--------HHH-HHHH
Confidence            999999999998888888888887776544      4444444332 23332211110000111        123 3334


Q ss_pred             hCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCC
Q psy15068        217 KCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY  296 (710)
Q Consensus       217 ~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~  296 (710)
                      ..|...+.....|.+. ||.|+.+|..++.+ +|+..|.+++..|.+|+||||.|+..|..+++++|+++|++++.....
T Consensus       186 ~~G~~~d~~~~rG~T~-lHvAaa~Gy~e~~~-lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~  263 (527)
T KOG0505|consen  186 NAGAELDARHARGATA-LHVAAANGYTEVAA-LLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKM  263 (527)
T ss_pred             hccccccccccccchH-HHHHHhhhHHHHHH-HHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhc
Confidence            4788888777776776 99999999999999 999999999999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHH
Q psy15068        297 FLPPMFFAIG  306 (710)
Q Consensus       297 ~~t~l~~a~~  306 (710)
                      |.+|+.+|..
T Consensus       264 g~~p~dv~de  273 (527)
T KOG0505|consen  264 GETPLDVADE  273 (527)
T ss_pred             CCCCccchhh
Confidence            9999988864

>KOG0505|consensus

Probab=99.90  E-value=2.5e-23  Score=196.83  Aligned_cols=227  Identities=30%  Similarity=0.428  Sum_probs=147.1

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCCCCCC
Q psy15068        381 PLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQ  460 (710)
Q Consensus       381 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~  460 (710)
                      .+.-|+..+..+-++.|+..|+.++....+             |.|++|.+|.. .+.++|++|+++|++++.. +..+|
T Consensus        43 ~~l~A~~~~d~~ev~~ll~~ga~~~~~n~D-------------glTalhq~~id-~~~e~v~~l~e~ga~Vn~~-d~e~w  107 (527)
T KOG0505|consen   43 VFLEACSRGDLEEVRKLLNRGASPNLCNVD-------------GLTALHQACID-DNLEMVKFLVENGANVNAQ-DNEGW  107 (527)
T ss_pred             HHHhccccccHHHHHHHhccCCCccccCCc-------------cchhHHHHHhc-ccHHHHHHHHHhcCCcccc-ccccC
Confidence            466788899999999999999999888887             99999999999 9999999999999999999 99999


Q ss_pred             CHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhh----cCchHHHHH
Q psy15068        461 KPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVR----SNKYDEVKK  536 (710)
Q Consensus       461 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~  536 (710)
                      ||||.|+..|+..++.+|+.+|+++...+  .++..|  ...+..................-+.++.    ...+.-+..
T Consensus       108 tPlhaaascg~~~i~~~li~~gA~~~avN--sdg~~P--~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q  183 (527)
T KOG0505|consen  108 TPLHAAASCGYLNIVEYLIQHGANLLAVN--SDGNMP--YDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQ  183 (527)
T ss_pred             CcchhhcccccHHHHHHHHHhhhhhhhcc--CCCCCc--cccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHH
Confidence            99999999999999999999999988877  777777  4444211111111111100000000000    001111112


Q ss_pred             HHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCC
Q psy15068        537 NIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDG  616 (710)
Q Consensus       537 ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~  616 (710)
                      .+..|...+.+...|.|.||.|+..|+.++.++|++.|.+++++|.+|+||||.|+.. |..++.++|+++|++.+..+ 
T Consensus       184 ~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~W-g~~~~~elL~~~ga~~d~~t-  261 (527)
T KOG0505|consen  184 WLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHW-GQEDACELLVEHGADMDAKT-  261 (527)
T ss_pred             HHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHh-hhHhHHHHHHHhhcccchhh-
Confidence            2224444454444455555555555555555555555555555555555555555555 55555555555555555555 


Q ss_pred             CCCCCHhHHHHh
Q psy15068        617 KTGKTPLKHAEA  628 (710)
Q Consensus       617 ~~g~t~L~~A~~  628 (710)
                      ..|.||+.+|..
T Consensus       262 ~~g~~p~dv~de  273 (527)
T KOG0505|consen  262 KMGETPLDVADE  273 (527)
T ss_pred             hcCCCCccchhh
Confidence            555555555543

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.89  E-value=2.6e-23  Score=180.45  Aligned_cols=144  Identities=16%  Similarity=0.160  Sum_probs=128.8

Q ss_pred             cCCcccccCCCCCcHHHHHHHcCCH----HHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchH---HHHHHHHcCCCCC
Q psy15068        540 DGACVNVSSERRGSALIYVAWKGYE----EIVDLLLDNGADVNFKSATGFTALHMACRFHSNDN---IVRKLLHHGAYYD  612 (710)
Q Consensus       540 ~~~~~~~~~~~g~t~L~~A~~~~~~----~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~---~v~~Ll~~g~~~~  612 (710)
                      ++++++..+.++.+++|.||..|+.    +++++|.+.|++++..|..|+||||+|+.. ++.+   ++++|+++|++++
T Consensus         9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~-g~~~~~~~i~~Ll~~Gadin   87 (166)
T PHA02743          9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWY-DRANAVMKIELLVNMGADIN   87 (166)
T ss_pred             cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHh-CccCHHHHHHHHHHcCCCCC
Confidence            5677888888899999999999998    677788889999999999999999999998 7654   4899999999999


Q ss_pred             CCCCCCCCCHhHHHHhCCChhHHHHHHh-hhhccccCCCCCCCchhhHHHHhhh---cccccceeehhHHHHhhhcccch
Q psy15068        613 MKDGKTGKTPLKHAEAGKNRDIIDLLHL-IDNLFASVTNPYDPNVYHRIELMNS---AKQLGLVHVFEIMKVVKNYAGET  688 (710)
Q Consensus       613 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~~~~~~~~~~~G~t  688 (710)
                      .++...|.||||+|+..++.+++++|++ .|++++.+|..|.||| |+|+..++   +++| +++|+++  +.++..|.+
T Consensus        88 ~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL-~~A~~~~~~~iv~~L-l~~ga~~--~~~~~~~~~  163 (166)
T PHA02743         88 ARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAY-HIAYKMRDRRMMEIL-RANGAVC--DDPLSIGLS  163 (166)
T ss_pred             CCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHH-HHHHHcCCHHHHHHH-HHcCCCC--CCcccCCcc
Confidence            9873489999999999999999999995 7999999999999999 99999998   9999 9999999  888887753

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.89  E-value=2.2e-22  Score=174.56  Aligned_cols=142  Identities=18%  Similarity=0.225  Sum_probs=92.9

Q ss_pred             hhccCCCccccchhHHHHHHhcCCH----HHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHH---HHHHHHcCCCCC
Q psy15068         45 GIINSSSAKSVELTLLCSAVWDNKI----REVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKM---VTLLIHHGANVN  117 (710)
Q Consensus        45 ~~~~~~~~~~~~~t~L~~A~~~g~~----~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~---v~~Ll~~g~~~~  117 (710)
                      +|++++..+.++.++||.|++.|++    +++++|++.++ .++.+|..|+||||+|+..|+.+.   +++|++.|++++
T Consensus         9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~-~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin   87 (166)
T PHA02743          9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGH-LLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADIN   87 (166)
T ss_pred             cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcch-hhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCC
Confidence            4455555666666677777777766    45555666666 666666677777777776665443   566777777777


Q ss_pred             CCC-CCCCCHHHHHHhcCCHHHHHHHHh-CCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCC
Q psy15068        118 DRD-EKGYTPLHLACYLGNKNIVKFLLS-KKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMP  193 (710)
Q Consensus       118 ~~~-~~~~t~L~~A~~~g~~~iv~~Ll~-~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~  193 (710)
                      .++ ..|.||||+|+..|+.+++++|++ .|++++..+..|.||||+|+..+      +.+++++|+++|++++.++.
T Consensus        88 ~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~------~~~iv~~Ll~~ga~~~~~~~  159 (166)
T PHA02743         88 ARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMR------DRRMMEILRANGAVCDDPLS  159 (166)
T ss_pred             CCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcC------CHHHHHHHHHcCCCCCCccc
Confidence            666 366777777777777777777763 56666666666666666666666      66666666666666655544

>KOG0512|consensus

Probab=99.87  E-value=1.1e-21  Score=156.01  Aligned_cols=141  Identities=26%  Similarity=0.211  Sum_probs=118.2

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCCh
Q psy15068        554 ALIYVAWKGYEEIVDLLLDNGAD-VNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNR  632 (710)
Q Consensus       554 ~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~  632 (710)
                      .+.+|+..+....|+.|++..++ +|.+|.+|+||||.|+.+ |+.+||+.|+..|++++.+. ..|+||||-||+-++.
T Consensus        66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn-~h~div~~ll~~gAn~~a~T-~~GWTPLhSAckWnN~  143 (228)
T KOG0512|consen   66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYN-GHLDIVHELLLSGANKEAKT-NEGWTPLHSACKWNNF  143 (228)
T ss_pred             HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhc-CchHHHHHHHHccCCccccc-ccCccchhhhhcccch
Confidence            46688888888888888876554 788899999999999998 99999999999999999998 8999999999999999


Q ss_pred             hHHHHHHhhhhccccCCCCCCCchhhHHHHhhh----cccccceeehhHHHHhhhcccchhHHHHhhhchh
Q psy15068        633 DIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS----AKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYS  699 (710)
Q Consensus       633 ~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~----~~~L~~~~g~~~~~~~~~~~G~t~l~~a~~~~~~  699 (710)
                      +++.+|+++|+|+|.+.....||| |+|+-+.+    +++|-...+.++  -..+..|.||+.+|.+-|-+
T Consensus       144 ~va~~LLqhgaDVnA~t~g~ltpL-hlaa~~rn~r~t~~~Ll~dryi~p--g~~nn~eeta~~iARRT~~s  211 (228)
T KOG0512|consen  144 EVAGRLLQHGADVNAQTKGLLTPL-HLAAGNRNSRDTLELLLHDRYIHP--GLKNNLEETAFDIARRTSMS  211 (228)
T ss_pred             hHHHHHHhccCcccccccccchhh-HHhhcccchHHHHHHHhhccccCh--hhhcCccchHHHHHHHhhhh
Confidence            999999999999999988888999 99988887    565524457777  78888899999999776544

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.85  E-value=1.5e-20  Score=175.05  Aligned_cols=156  Identities=23%  Similarity=0.266  Sum_probs=127.6

Q ss_pred             CCCccccchh-HHHHHHhcCCHHHHHHHHhcCCCCCcccc----CCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCC-CCC
Q psy15068         49 SSSAKSVELT-LLCSAVWDNKIREVEFLLSTGDHDVNEKL----QDGRTALYMAILQGLYKMVTLLIHHGANVNDR-DEK  122 (710)
Q Consensus        49 ~~~~~~~~~t-~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~----~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-~~~  122 (710)
                      +..+|..|+| +||.|++.|+.+++++|+++|+ +++.++    ..|.||||+|+..|+.+++++|+++|++++.. +..
T Consensus        25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GA-diN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~  103 (300)
T PHA02884         25 IKKKNKICIANILYSSIKFHYTDIIDAILKLGA-DPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEA  103 (300)
T ss_pred             hhccCcCCCCHHHHHHHHcCCHHHHHHHHHCCC-CccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCC
Confidence            4556666664 6677777789999999999999 999874    58999999999999999999999999999986 467


Q ss_pred             CCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHH
Q psy15068        123 GYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHF  202 (710)
Q Consensus       123 ~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~  202 (710)
                      |.||||+|+..|+.+++++|+++|++++.++..|.|||++|+..+      +.+++..+...+  .   +. .+.+|.+.
T Consensus       104 g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~------~~~~~~~~~~~~--~---~~-~~~~~~~~  171 (300)
T PHA02884        104 KITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMIC------NNFLAFMICDNE--I---SN-FYKHPKKI  171 (300)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhC------ChhHHHHhcCCc--c---cc-cccChhhh
Confidence            999999999999999999999999999999999999999999877      666665554322  1   22 55567775


Q ss_pred             HHHhCCHHHHHHHHhCCC
Q psy15068        203 AVVKKNLSVVELLIKCKA  220 (710)
Q Consensus       203 A~~~~~~~~v~~Ll~~g~  220 (710)
                      +   ++.++++.|+.++.
T Consensus       172 ~---~n~ei~~~Lish~v  186 (300)
T PHA02884        172 L---INFDILKILVSHFI  186 (300)
T ss_pred             h---ccHHHHHHHHHHHH
Confidence            4   46888999888765

>KOG0514|consensus

Probab=99.85  E-value=2.9e-21  Score=172.87  Aligned_cols=168  Identities=27%  Similarity=0.358  Sum_probs=141.0

Q ss_pred             CCCCCCCCCCHHHHHHhcCCHHHHHHHHhCC-CCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCC
Q psy15068        116 VNDRDEKGYTPLHLACYLGNKNIVKFLLSKK-ADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPF  194 (710)
Q Consensus       116 ~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g-~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~  194 (710)
                      +|..|.+|+|+||||+..++++||+.||+.| .+++..+.-|+||+++++...-.... +.++|..|..-| ++|.+...
T Consensus       261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~-d~~vV~~LF~mg-nVNaKAsQ  338 (452)
T KOG0514|consen  261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPA-DRTVVERLFKMG-DVNAKASQ  338 (452)
T ss_pred             hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchh-hHHHHHHHHhcc-Ccchhhhh
Confidence            5667788888888888888888888888776 47778888888888777655433222 677777777765 56666666


Q ss_pred             CCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHc
Q psy15068        195 TDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHV  274 (710)
Q Consensus       195 ~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~  274 (710)
                      .|+|+|..|+..|+.++++.|+..|+++|..|+.|.++ |+.|++.|+.++++.+|-..++++...|.+|.|+|.+|...
T Consensus       339 ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTA-LMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAlea  417 (452)
T KOG0514|consen  339 HGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTA-LMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEA  417 (452)
T ss_pred             hcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHH-HhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhc
Confidence            89999999999999999999999999999999999998 99999999999999888888999999999999999999999


Q ss_pred             CCHHHHHHHHHc
Q psy15068        275 GNLQIVQMLVKR  286 (710)
Q Consensus       275 ~~~~~v~~Ll~~  286 (710)
                      |+.+|.-+|..+
T Consensus       418 gh~eIa~mlYa~  429 (452)
T KOG0514|consen  418 GHREIAVMLYAH  429 (452)
T ss_pred             CchHHHHHHHHH
Confidence            999998888764

>PHA02741 hypothetical protein; Provisional

Probab=99.85  E-value=8.5e-21  Score=165.86  Aligned_cols=131  Identities=18%  Similarity=0.186  Sum_probs=101.7

Q ss_pred             CCccccchhHHHHHHhcCCHHHHHHHHhc------CCCCCccccCCCCcHHHHHHHcCc----HHHHHHHHHcCCCCCCC
Q psy15068         50 SSAKSVELTLLCSAVWDNKIREVEFLLST------GDHDVNEKLQDGRTALYMAILQGL----YKMVTLLIHHGANVNDR  119 (710)
Q Consensus        50 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~------~~~~~~~~~~~g~t~L~~A~~~g~----~~~v~~Ll~~g~~~~~~  119 (710)
                      +.++..|.|+||.|++.|+.++++.|+..      ++ +++.+|..|+||||+|+..|+    .+++++|++.|++++.+
T Consensus        15 ~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga-~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~   93 (169)
T PHA02741         15 AEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAA-ALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQ   93 (169)
T ss_pred             hccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhh-hhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCC
Confidence            45667788888888888888888877542      35 677888888888888888887    47788888888888877


Q ss_pred             CC-CCCCHHHHHHhcCCHHHHHHHHh-CCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCC
Q psy15068        120 DE-KGYTPLHLACYLGNKNIVKFLLS-KKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGAN  187 (710)
Q Consensus       120 ~~-~~~t~L~~A~~~g~~~iv~~Ll~-~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~  187 (710)
                      +. .|.||||+|+..++.+++++|++ .|++++..+..|.|||++|+..+      +.+++++|++.++.
T Consensus        94 ~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~------~~~iv~~L~~~~~~  157 (169)
T PHA02741         94 EMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNE------DVAMMQILREIVAT  157 (169)
T ss_pred             CcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCC------CHHHHHHHHHHHHH
Confidence            74 78888888888888888888886 47888877777888888887777      77777777766543

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.85  E-value=1.4e-20  Score=175.20  Aligned_cols=150  Identities=21%  Similarity=0.286  Sum_probs=131.9

Q ss_pred             ccccchhhhhhcChhhHHHHHHhhhccCCCcc----ccchhHHHHHHhcCCHHHHHHHHhcCCCCCccc-cCCCCcHHHH
Q psy15068         22 YRHHHLFSEIMFSEEDAFGYFLQGIINSSSAK----SVELTLLCSAVWDNKIREVEFLLSTGDHDVNEK-LQDGRTALYM   96 (710)
Q Consensus        22 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~----~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~g~t~L~~   96 (710)
                      ...++|+.|+++|+.+++++|+++|++++.++    ..|.||||.|+..|+.+++++|+++|+ +++.+ +..|.||||+
T Consensus        32 ~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GA-DVN~~~~~~g~TpLh~  110 (300)
T PHA02884         32 CIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGA-DVNRYAEEAKITPLYI  110 (300)
T ss_pred             CCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CcCcccCCCCCCHHHH
Confidence            34578888999999999999999999999974    589999999999999999999999999 99986 5689999999


Q ss_pred             HHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHH
Q psy15068         97 AILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNE  176 (710)
Q Consensus        97 A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~  176 (710)
                      |+..|+.+++++|++.|++++.+|..|.||||+|+..++.+++..+...  .   .+..+.+|..++   +      ..+
T Consensus       111 Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~---~------n~e  176 (300)
T PHA02884        111 SVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICDN--E---ISNFYKHPKKIL---I------NFD  176 (300)
T ss_pred             HHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcCC--c---ccccccChhhhh---c------cHH
Confidence            9999999999999999999999999999999999999999887666533  2   345556777764   2      678


Q ss_pred             HHHHHHHcCC
Q psy15068        177 IISMLIENGA  186 (710)
Q Consensus       177 ~~~~Ll~~~~  186 (710)
                      ++++|++++.
T Consensus       177 i~~~Lish~v  186 (300)
T PHA02884        177 ILKILVSHFI  186 (300)
T ss_pred             HHHHHHHHHH
Confidence            9999998876

>PHA02741 hypothetical protein; Provisional

Probab=99.85  E-value=1.3e-20  Score=164.80  Aligned_cols=131  Identities=15%  Similarity=0.156  Sum_probs=120.5

Q ss_pred             ccccccccchhhhhhcChhhHHHHHHh------hhccCCCccccchhHHHHHHhcCC----HHHHHHHHhcCCCCCcccc
Q psy15068         18 KESSYRHHHLFSEIMFSEEDAFGYFLQ------GIINSSSAKSVELTLLCSAVWDNK----IREVEFLLSTGDHDVNEKL   87 (710)
Q Consensus        18 ~~~~~~~~~l~~a~~~~~~~~~~~ll~------~~~~~~~~~~~~~t~L~~A~~~g~----~~~v~~Ll~~~~~~~~~~~   87 (710)
                      .+...+.|+|+.|+..|+.+++++|++      .|++++.+|..|.||||.|+..|+    .+++++|++.|+ +++.++
T Consensus        16 ~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~ga-din~~~   94 (169)
T PHA02741         16 EKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGA-DINAQE   94 (169)
T ss_pred             ccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCC-CCCCCC
Confidence            345678999999999999999999864      368899999999999999999999    589999999999 999998


Q ss_pred             C-CCCcHHHHHHHcCcHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCc
Q psy15068         88 Q-DGRTALYMAILQGLYKMVTLLIH-HGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADV  149 (710)
Q Consensus        88 ~-~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~  149 (710)
                      . .|+||||+|+..++.+++++|++ .|++++..|..|.||||+|+..|+.+++++|++.++..
T Consensus        95 ~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~  158 (169)
T PHA02741         95 MLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATS  158 (169)
T ss_pred             cCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence            5 99999999999999999999998 59999999999999999999999999999999987654

>KOG0512|consensus

Probab=99.84  E-value=1.2e-20  Score=150.13  Aligned_cols=137  Identities=28%  Similarity=0.356  Sum_probs=125.8

Q ss_pred             hhcCchHHHHHHHhcCCc-ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHH
Q psy15068        526 VRSNKYDEVKKNIEDGAC-VNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKL  604 (710)
Q Consensus       526 ~~~~~~~~~~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~L  604 (710)
                      +..+.+..|+.|++..++ +|.+|.+|.||||.|+.+|+.+||+.|+.+|++++++...|+||||-||.. .+.+++-.|
T Consensus        71 ae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckW-nN~~va~~L  149 (228)
T KOG0512|consen   71 AEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKW-NNFEVAGRL  149 (228)
T ss_pred             HhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcc-cchhHHHHH
Confidence            788899999999987665 899999999999999999999999999999999999999999999999999 999999999


Q ss_pred             HHcCCCCCCCCCCCCCCHhHHHHhCCCh-hHHHHHHh-hhhccccCCCCCCCchhhHHHHhhh
Q psy15068        605 LHHGAYYDMKDGKTGKTPLKHAEAGKNR-DIIDLLHL-IDNLFASVTNPYDPNVYHRIELMNS  665 (710)
Q Consensus       605 l~~g~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~-~g~~~~~~~~~g~t~L~~~A~~~~~  665 (710)
                      |++|+|+|... ....||||+|+...+. ..+++|+. .++++-.++..+.||+ .+|.+-+.
T Consensus       150 LqhgaDVnA~t-~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~-~iARRT~~  210 (228)
T KOG0512|consen  150 LQHGADVNAQT-KGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAF-DIARRTSM  210 (228)
T ss_pred             HhccCcccccc-cccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHH-HHHHHhhh
Confidence            99999999999 8889999999976654 56777766 5889999999999999 99988765

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.81  E-value=9.3e-20  Score=157.35  Aligned_cols=132  Identities=19%  Similarity=0.277  Sum_probs=77.4

Q ss_pred             CCCccccchhHHHHHHhcCCHHHHHHHHhcCC------CCCccccCCCCcHHHHHHHcCcH---HHHHHHHHcCCCCCCC
Q psy15068         49 SSSAKSVELTLLCSAVWDNKIREVEFLLSTGD------HDVNEKLQDGRTALYMAILQGLY---KMVTLLIHHGANVNDR  119 (710)
Q Consensus        49 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~------~~~~~~~~~g~t~L~~A~~~g~~---~~v~~Ll~~g~~~~~~  119 (710)
                      ++..|..|.||||+|++.|+..  +.+...+.      ..++.+|..|+||||+|+..|+.   +++++|++.|++++.+
T Consensus        10 ~~~~d~~g~tpLh~A~~~g~~~--~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~   87 (154)
T PHA02736         10 ASEPDIEGENILHYLCRNGGVT--DLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGK   87 (154)
T ss_pred             HHhcCCCCCCHHHHHHHhCCHH--HHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCcccc
Confidence            3445556666666666666632  22211111      01223456666666666666655   3456666666666666


Q ss_pred             C-CCCCCHHHHHHhcCCHHHHHHHHh-CCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCc
Q psy15068        120 D-EKGYTPLHLACYLGNKNIVKFLLS-KKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANV  188 (710)
Q Consensus       120 ~-~~~~t~L~~A~~~g~~~iv~~Ll~-~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~  188 (710)
                      + ..|.||||+|+..|+.+++++|++ .|++++..+..|.|||++|+..+      +.+++++|+++|++.
T Consensus        88 ~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~------~~~i~~~Ll~~ga~~  152 (154)
T PHA02736         88 ERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERH------DAKMMNILRAKGAQC  152 (154)
T ss_pred             CCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcC------CHHHHHHHHHcCCCC
Confidence            5 366666666666666666666665 36666666666666666666666      666666666665543

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.81  E-value=1.3e-19  Score=156.47  Aligned_cols=130  Identities=18%  Similarity=0.140  Sum_probs=111.8

Q ss_pred             ccccccccchhhhhhcChhhHHHHHHhhhcc-------CCCccccchhHHHHHHhcCCH---HHHHHHHhcCCCCCcccc
Q psy15068         18 KESSYRHHHLFSEIMFSEEDAFGYFLQGIIN-------SSSAKSVELTLLCSAVWDNKI---REVEFLLSTGDHDVNEKL   87 (710)
Q Consensus        18 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~-------~~~~~~~~~t~L~~A~~~g~~---~~v~~Ll~~~~~~~~~~~   87 (710)
                      .....+.|||++|+..|+.  ++.+...+..       ++..|..|.||||.|+..|+.   +++++|++.|+ +++.++
T Consensus        12 ~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~ga-din~~~   88 (154)
T PHA02736         12 EPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGA-DINGKE   88 (154)
T ss_pred             hcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCC-CccccC
Confidence            4456699999999999983  3443333321       334678899999999999987   46899999999 999998


Q ss_pred             -CCCCcHHHHHHHcCcHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCcc
Q psy15068         88 -QDGRTALYMAILQGLYKMVTLLIHH-GANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVR  150 (710)
Q Consensus        88 -~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~  150 (710)
                       ..|+||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+++|++.+
T Consensus        89 ~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~  153 (154)
T PHA02736         89 RVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK  153 (154)
T ss_pred             CCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence             4999999999999999999999984 99999999999999999999999999999999998764

>KOG0195|consensus

Probab=99.80  E-value=5.7e-20  Score=159.11  Aligned_cols=113  Identities=27%  Similarity=0.292  Sum_probs=58.1

Q ss_pred             CCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCC
Q psy15068        575 ADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDP  654 (710)
Q Consensus       575 ~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t  654 (710)
                      -|.|.-|..|.+|||+|++. |+..+++.|+..|+.+|..+ .-..||||+|+..|+.++|+.|++..+|+|..+..|+|
T Consensus        25 hdln~gddhgfsplhwaake-gh~aivemll~rgarvn~tn-mgddtplhlaaahghrdivqkll~~kadvnavnehgnt  102 (448)
T KOG0195|consen   25 HDLNVGDDHGFSPLHWAAKE-GHVAIVEMLLSRGARVNSTN-MGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNT  102 (448)
T ss_pred             cccccccccCcchhhhhhhc-ccHHHHHHHHhccccccccc-CCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCC
Confidence            34444445555555555554 55555555555555555544 44445555555555555555555555555555555555


Q ss_pred             chhhHHHHhhh---cccccceeehhHHHHhhhcccchhHHHH
Q psy15068        655 NVYHRIELMNS---AKQLGLVHVFEIMKVVKNYAGETLIGVA  693 (710)
Q Consensus       655 ~L~~~A~~~~~---~~~L~~~~g~~~~~~~~~~~G~t~l~~a  693 (710)
                      || ||||..|.   .+-| ++.||.+  ++-|++|.|||+.|
T Consensus       103 pl-hyacfwgydqiaedl-i~~ga~v--~icnk~g~tpldka  140 (448)
T KOG0195|consen  103 PL-HYACFWGYDQIAEDL-ISCGAAV--NICNKKGMTPLDKA  140 (448)
T ss_pred             ch-hhhhhhcHHHHHHHH-Hhcccee--eecccCCCCchhhh
Confidence            55 55555554   4455 5555555  55555555555544

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.77  E-value=2.5e-18  Score=132.84  Aligned_cols=89  Identities=40%  Similarity=0.587  Sum_probs=69.3

Q ss_pred             HHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHH
Q psy15068         60 LCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIV  139 (710)
Q Consensus        60 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv  139 (710)
                      ||.|++.|+.+++++|++.+. +++.    |+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+.+++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~-~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~   75 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGA-DINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIV   75 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTS-TTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcC-CCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHH
Confidence            678888888888888888776 6655    77888888888888888888888888888888888888888888888888


Q ss_pred             HHHHhCCCCccccc
Q psy15068        140 KFLLSKKADVRAKC  153 (710)
Q Consensus       140 ~~Ll~~g~~~~~~~  153 (710)
                      ++|+++|++++.+|
T Consensus        76 ~~Ll~~g~~~~~~n   89 (89)
T PF12796_consen   76 KLLLEHGADVNIRN   89 (89)
T ss_dssp             HHHHHTTT-TTSS-
T ss_pred             HHHHHcCCCCCCcC
Confidence            88888888777653

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG3676|consensus

Probab=99.77  E-value=5.5e-18  Score=169.51  Aligned_cols=209  Identities=22%  Similarity=0.194  Sum_probs=162.0

Q ss_pred             cHHHHHHHcCCHHHHHHHHHcC---------CCCCchhhhhhhhhccccCccccCCHHHHHHH--ccCcHHHHHHHHHCC
Q psy15068        380 TPLLFAAKHCDLQSAKYLIQKG---------ANVNLTETQKAFISDARSSDFCFRSALQYACK--HKNNIEMVKLLLLHG  448 (710)
Q Consensus       380 t~L~~A~~~~~~~~~~~Ll~~g---------~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~--~~~~~~~~~~Ll~~~  448 (710)
                      .++..+...+..+....++..+         .+++.+             ..-|.|.||.|..  +.++-++++.|++--
T Consensus       103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~R-------------Ga~GET~Lh~~lL~~~~~~n~la~~LL~~~  169 (782)
T KOG3676|consen  103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNER-------------GATGETLLHKALLNLSDGHNELARVLLEIF  169 (782)
T ss_pred             hhhhhccccccHHHHhccchhhhhhhhhhhhhccccc-------------cchhhhHHHHHHhcCchhHHHHHHHHHHHh
Confidence            5677777777777777666554         333333             3339999999988  346668999998875


Q ss_pred             CC----CCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHH
Q psy15068        449 AD----VNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLK  524 (710)
Q Consensus       449 ~~----~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~  524 (710)
                      +.    +-......|+||||.|+.+.+.++|++|++.||||+...   .|.    +..+                     
T Consensus       170 p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa---~G~----FF~~---------------------  221 (782)
T KOG3676|consen  170 PKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARA---CGA----FFCP---------------------  221 (782)
T ss_pred             HHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHh---hcc----ccCc---------------------
Confidence            43    222235689999999999999999999999999998653   000    1111                     


Q ss_pred             hhhcCchHHHHHHHhcCCccccc--CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHH
Q psy15068        525 NVRSNKYDEVKKNIEDGACVNVS--SERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVR  602 (710)
Q Consensus       525 ~~~~~~~~~~~~ll~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~  602 (710)
                       -..+...       +  ..|..  --.|+.||-+||--++.+++++|+++|+|++++|..|+|.||..+.. -..+|..
T Consensus       222 -~dqk~~r-------k--~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~-~~~~My~  290 (782)
T KOG3676|consen  222 -DDQKASR-------K--STNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIH-FVTEMYD  290 (782)
T ss_pred             -ccccccc-------c--ccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHH-HHHHHHH
Confidence             0000000       0  01111  12588999999999999999999999999999999999999999998 8899999


Q ss_pred             HHHHcCCC--CCCCCCCCCCCHhHHHHhCCChhHHHHHHhh
Q psy15068        603 KLLHHGAY--YDMKDGKTGKTPLKHAEAGKNRDIIDLLHLI  641 (710)
Q Consensus       603 ~Ll~~g~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~  641 (710)
                      +++++|++  ...+| +.|.|||.+|++.|+.++.+.+++.
T Consensus       291 ~~L~~ga~~l~~v~N-~qgLTPLtLAaklGk~emf~~ile~  330 (782)
T KOG3676|consen  291 LALELGANALEHVRN-NQGLTPLTLAAKLGKKEMFQHILER  330 (782)
T ss_pred             HHHhcCCCccccccc-cCCCChHHHHHHhhhHHHHHHHHHh
Confidence            99999999  88888 9999999999999999999999997

>KOG0195|consensus

Probab=99.76  E-value=1.3e-18  Score=150.86  Aligned_cols=124  Identities=28%  Similarity=0.326  Sum_probs=110.5

Q ss_pred             HHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCC
Q psy15068         42 FLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDE  121 (710)
Q Consensus        42 ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~  121 (710)
                      |-+..-+.|.-|..|.+|||+|++.|+..+|+.|+..|+ .+|..+....||||+|+..|+.++|+.|++..+++|..++
T Consensus        20 ld~tehdln~gddhgfsplhwaakegh~aivemll~rga-rvn~tnmgddtplhlaaahghrdivqkll~~kadvnavne   98 (448)
T KOG0195|consen   20 LDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGA-RVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNE   98 (448)
T ss_pred             ecCcccccccccccCcchhhhhhhcccHHHHHHHHhccc-ccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhc
Confidence            334455778888899999999999999999999999999 9999888888999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhc
Q psy15068        122 KGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSAN  166 (710)
Q Consensus       122 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~  166 (710)
                      .|+|||||||.-|...|.+-|+..|+-++..+..|.||+..|-..
T Consensus        99 hgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkakp~  143 (448)
T KOG0195|consen   99 HGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAKPM  143 (448)
T ss_pred             cCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhchH
Confidence            999999999999999999999999999999999999999877443

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.76  E-value=4.6e-18  Score=131.38  Aligned_cols=89  Identities=38%  Similarity=0.462  Sum_probs=80.6

Q ss_pred             HHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhH
Q psy15068        555 LIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDI  634 (710)
Q Consensus       555 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~  634 (710)
                      ||+|+..|+.+++++|++.+.+++.    |+||||+|+.. |+.+++++|+++|++++.++ ..|+||||+|+..|+.++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~-~~~~~~~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~   74 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAEN-GNLEIVKLLLENGADINSQD-KNGNTALHYAAENGNLEI   74 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHT-TTHHHHHHHHHTTTCTT-BS-TTSSBHHHHHHHTTHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHc-CCHHHHHHHHHhcccccccC-CCCCCHHHHHHHcCCHHH
Confidence            7899999999999999999988876    88999999999 99999999999999999999 999999999999999999


Q ss_pred             HHHHHhhhhccccCC
Q psy15068        635 IDLLHLIDNLFASVT  649 (710)
Q Consensus       635 v~~Ll~~g~~~~~~~  649 (710)
                      +++|+++|++++.+|
T Consensus        75 ~~~Ll~~g~~~~~~n   89 (89)
T PF12796_consen   75 VKLLLEHGADVNIRN   89 (89)
T ss_dssp             HHHHHHTTT-TTSS-
T ss_pred             HHHHHHcCCCCCCcC
Confidence            999999999999876

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG3676|consensus

Probab=99.73  E-value=7.1e-17  Score=161.69  Aligned_cols=189  Identities=24%  Similarity=0.262  Sum_probs=165.3

Q ss_pred             cccchhhhhhcChhhHHHHHHhhh---------ccCCCccccchhHHHHHHh---cCCHHHHHHHHhcCCCCCccc----
Q psy15068         23 RHHHLFSEIMFSEEDAFGYFLQGI---------INSSSAKSVELTLLCSAVW---DNKIREVEFLLSTGDHDVNEK----   86 (710)
Q Consensus        23 ~~~~l~~a~~~~~~~~~~~ll~~~---------~~~~~~~~~~~t~L~~A~~---~g~~~~v~~Ll~~~~~~~~~~----   86 (710)
                      ...+++.|...+..+..+.+++.+         .+++.+..-|.|+||.|..   .++-++++.|++..+.-+|..    
T Consensus       101 d~~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~e  180 (782)
T KOG3676|consen  101 DRDALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSE  180 (782)
T ss_pred             chhhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhH
Confidence            348889999999999999998866         5677777889999999997   456699999999876333322    


Q ss_pred             cCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCC---------CC--------------CCCCHHHHHHhcCCHHHHHHHH
Q psy15068         87 LQDGRTALYMAILQGLYKMVTLLIHHGANVNDR---------DE--------------KGYTPLHLACYLGNKNIVKFLL  143 (710)
Q Consensus        87 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~---------~~--------------~~~t~L~~A~~~g~~~iv~~Ll  143 (710)
                      ...|.||||.|+.+.+.++|++|++.|||++.+         |.              .|..||.+|+..++.||+++|+
T Consensus       181 eY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl  260 (782)
T KOG3676|consen  181 EYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLL  260 (782)
T ss_pred             hhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHH
Confidence            247999999999999999999999999998764         11              3678999999999999999999


Q ss_pred             hCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCC--cccCCCCCCCCHHHHHHHhCCHHHHHHHHhC
Q psy15068        144 SKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGAN--VREKMPFTDFSPLHFAVVKKNLSVVELLIKC  218 (710)
Q Consensus       144 ~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~--~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~  218 (710)
                      ++|||++.+|..|.|.||..+..-      ..++..++++.|++  ....+. .|.|||..|+.-|..++.+.+++.
T Consensus       261 ~~gAd~~aqDS~GNTVLH~lVi~~------~~~My~~~L~~ga~~l~~v~N~-qgLTPLtLAaklGk~emf~~ile~  330 (782)
T KOG3676|consen  261 AHGADPNAQDSNGNTVLHMLVIHF------VTEMYDLALELGANALEHVRNN-QGLTPLTLAAKLGKKEMFQHILER  330 (782)
T ss_pred             hcCCCCCccccCCChHHHHHHHHH------HHHHHHHHHhcCCCcccccccc-CCCChHHHHHHhhhHHHHHHHHHh
Confidence            999999999999999999999987      99999999999998  666666 999999999999999999999988

>KOG4214|consensus

Probab=99.70  E-value=9.6e-17  Score=113.17  Aligned_cols=104  Identities=34%  Similarity=0.412  Sum_probs=92.8

Q ss_pred             hHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHH
Q psy15068         58 TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKN  137 (710)
Q Consensus        58 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~  137 (710)
                      --+.+++++|.++-|+.....|. ++|..- .|++|||+|+-+|+.+++++|+..|++++.+|+.|.|||.-|+..||.+
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~g~-nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~   81 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNEGL-NVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRD   81 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHccc-cHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHH
Confidence            34678899999999999999986 888765 8999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCccccccCCCchhHHh
Q psy15068        138 IVKFLLSKKADVRAKCSMMVTPILAV  163 (710)
Q Consensus       138 iv~~Ll~~g~~~~~~~~~~~~~l~~a  163 (710)
                      +|++|+++|++-.....+|.+.+..+
T Consensus        82 cVklLL~~GAdrt~~~PdG~~~~eat  107 (117)
T KOG4214|consen   82 CVKLLLQNGADRTIHAPDGTALIEAT  107 (117)
T ss_pred             HHHHHHHcCcccceeCCCchhHHhhc
Confidence            99999999999888888887766544

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.70  E-value=3.4e-16  Score=131.44  Aligned_cols=121  Identities=40%  Similarity=0.537  Sum_probs=72.3

Q ss_pred             ccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhc
Q psy15068         54 SVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYL  133 (710)
Q Consensus        54 ~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~  133 (710)
                      ..|.||||.|+..|+.+++++|++.++ +.+.++..|.||+|+|+..++.+++++|++.|++++..+..+.||+|+|+..
T Consensus         5 ~~g~t~l~~a~~~~~~~~i~~li~~~~-~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~   83 (126)
T cd00204           5 EDGRTPLHLAASNGHLEVVKLLLENGA-DVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARN   83 (126)
T ss_pred             cCCCCHHHHHHHcCcHHHHHHHHHcCC-CCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence            445566666666666666666666665 5455555666666666666666666666666655555555566666666666


Q ss_pred             CCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHH
Q psy15068        134 GNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISML  181 (710)
Q Consensus       134 g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~L  181 (710)
                      ++.+++++|+++|.+.+..+..+.+|++.|...+      ..+++++|
T Consensus        84 ~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~~~~L  125 (126)
T cd00204          84 GNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNG------HLEVVKLL  125 (126)
T ss_pred             CcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC------CHHHHHHh
Confidence            6666666666666555555555555555555554      55555444

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.67  E-value=8.4e-16  Score=129.00  Aligned_cols=122  Identities=33%  Similarity=0.432  Sum_probs=117.0

Q ss_pred             cccccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHc
Q psy15068         21 SYRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQ  100 (710)
Q Consensus        21 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~  100 (710)
                      ..+.|||+.|+..++.+++++|++.+.+.+..+..|.||||.|+..++.+++++|++.++ .++..+..|.||+|+|+..
T Consensus         5 ~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~-~~~~~~~~~~~~l~~a~~~   83 (126)
T cd00204           5 EDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGA-DVNARDKDGNTPLHLAARN   83 (126)
T ss_pred             cCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCC-CccccCCCCCCHHHHHHHc
Confidence            567899999999999999999999999989999999999999999999999999999998 8888999999999999999


Q ss_pred             CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHH
Q psy15068        101 GLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLL  143 (710)
Q Consensus       101 g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll  143 (710)
                      ++.+++++|++.|.+++..+..+.||+++|...++.+++++|+
T Consensus        84 ~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          84 GNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             CcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            9999999999999999999999999999999999999999884

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>KOG4214|consensus

Probab=99.63  E-value=2.2e-15  Score=106.44  Aligned_cols=98  Identities=28%  Similarity=0.376  Sum_probs=88.9

Q ss_pred             hhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHH
Q psy15068        526 VRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLL  605 (710)
Q Consensus       526 ~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll  605 (710)
                      ++++.++-|+..+..|.++|..- .|++|||+|+-.|..++++||+..|++++.+|+.|-|||.-|+.. |+.++|++|+
T Consensus        10 vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwE-GH~~cVklLL   87 (117)
T KOG4214|consen   10 VKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWE-GHRDCVKLLL   87 (117)
T ss_pred             hccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHH-hhHHHHHHHH
Confidence            78899999999999998888766 899999999999999999999999999999999999999999999 9999999999


Q ss_pred             HcCCCCCCCCCCCCCCHhHHH
Q psy15068        606 HHGAYYDMKDGKTGKTPLKHA  626 (710)
Q Consensus       606 ~~g~~~~~~~~~~g~t~L~~A  626 (710)
                      +.|++-.... .+|.+.+..+
T Consensus        88 ~~GAdrt~~~-PdG~~~~eat  107 (117)
T KOG4214|consen   88 QNGADRTIHA-PDGTALIEAT  107 (117)
T ss_pred             HcCcccceeC-CCchhHHhhc
Confidence            9999988887 7887766544

>KOG0515|consensus

Probab=99.51  E-value=4e-14  Score=133.66  Aligned_cols=121  Identities=22%  Similarity=0.217  Sum_probs=110.7

Q ss_pred             HHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchH
Q psy15068        520 LDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDN  599 (710)
Q Consensus       520 ~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~  599 (710)
                      ..++.+...|.+++|+..+..--|+...+.+|-|+||.|+-.|+.+||+||++.|+++|+.|.+||||||+|+.+ ++..
T Consensus       552 aLLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASC-Nnv~  630 (752)
T KOG0515|consen  552 ALLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASC-NNVP  630 (752)
T ss_pred             HHHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhc-CchH
Confidence            345677899999999999999889999999999999999999999999999999999999999999999999999 9999


Q ss_pred             HHHHHHHcCCCCCCCCCCCCCCHhHHHH--hCCChhHHHHHHhh
Q psy15068        600 IVRKLLHHGAYYDMKDGKTGKTPLKHAE--AGKNRDIIDLLHLI  641 (710)
Q Consensus       600 ~v~~Ll~~g~~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~  641 (710)
                      +++.|++.|+.+....-.++.||...+-  +.|..++.+||-.-
T Consensus       631 ~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~v  674 (752)
T KOG0515|consen  631 MCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYGV  674 (752)
T ss_pred             HHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHHH
Confidence            9999999999988887788999988865  56788999999553

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.50  E-value=1.7e-13  Score=129.40  Aligned_cols=131  Identities=35%  Similarity=0.448  Sum_probs=111.1

Q ss_pred             cCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCc-----HHHHHHHHHcCC---CCCCC
Q psy15068         48 NSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGL-----YKMVTLLIHHGA---NVNDR  119 (710)
Q Consensus        48 ~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~-----~~~v~~Ll~~g~---~~~~~  119 (710)
                      .....+..+.++++.|+..++.+++++++..+. +++.++..|.||||+|+..|+     .+++++|++.|+   ..+.+
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~  143 (235)
T COG0666          65 HLAARDLDGRLPLHSAASKGDDKIVKLLLASGA-DVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLR  143 (235)
T ss_pred             ccccCCccccCHHHHHHHcCcHHHHHHHHHcCC-CcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCcccc
Confidence            334555667888888888888888888888888 888888888999999998888     888999988888   55566


Q ss_pred             CCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcC
Q psy15068        120 DEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENG  185 (710)
Q Consensus       120 ~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~  185 (710)
                      |..|.||||+|+..|+.+++++|++.|++++..+..|.|+++.++..+      +.++++.++..+
T Consensus       144 ~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~------~~~~~~~l~~~~  203 (235)
T COG0666         144 DEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNG------RIELVKLLLDKG  203 (235)
T ss_pred             CCCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccc------hHHHHHHHHhcC
Confidence            888889999999888888888888888888888888889999888888      888888888865

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.48  E-value=4.2e-13  Score=126.72  Aligned_cols=131  Identities=31%  Similarity=0.406  Sum_probs=113.5

Q ss_pred             CCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCC-----HHHHHHHHhCCC---Cccccc
Q psy15068         82 DVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGN-----KNIVKFLLSKKA---DVRAKC  153 (710)
Q Consensus        82 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~-----~~iv~~Ll~~g~---~~~~~~  153 (710)
                      .....+..+.++++.|+..+..+++++++..|++++.++..|.||||+|+..++     .+++++|++.|+   ..+..+
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~  144 (235)
T COG0666          65 HLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRD  144 (235)
T ss_pred             ccccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccC
Confidence            345566678899999999999999999999999998899999999999999998     899999999998   556668


Q ss_pred             cCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCC
Q psy15068        154 SMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCK  219 (710)
Q Consensus       154 ~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g  219 (710)
                      ..|.||+|+|+..+      +.++++.|++.|++++.... .|.|+++.|+..++.++++.+++.+
T Consensus       145 ~~g~tpl~~A~~~~------~~~~~~~ll~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         145 EDGNTPLHWAALNG------DADIVELLLEAGADPNSRNS-YGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             CCCCchhHHHHHcC------chHHHHHHHhcCCCCccccc-CCCcchhhhcccchHHHHHHHHhcC
Confidence            89999999999998      88899999999998888877 8889999999999999999998876

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.47  E-value=1.1e-13  Score=94.15  Aligned_cols=54  Identities=54%  Similarity=0.799  Sum_probs=32.1

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHH
Q psy15068         90 GRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLL  143 (710)
Q Consensus        90 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll  143 (710)
                      |+||||+|++.|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            456666666666666666666666666666666666666666666666666664

...

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.46  E-value=7.3e-14  Score=95.22  Aligned_cols=54  Identities=44%  Similarity=0.573  Sum_probs=18.8

Q ss_pred             HhcC-CcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHH
Q psy15068        538 IEDG-ACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMA  591 (710)
Q Consensus       538 l~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A  591 (710)
                      +++| .+++..|..|.||||+|+..|+.+++++|++.|+|++.+|..|+||||+|
T Consensus         2 L~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    2 LEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             ----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            3444 44555555555555555555555555555555555555555555555554

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.45  E-value=8.6e-14  Score=94.85  Aligned_cols=55  Identities=49%  Similarity=0.724  Sum_probs=20.1

Q ss_pred             HHHcC-CCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHH
Q psy15068        570 LLDNG-ADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHA  626 (710)
Q Consensus       570 Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A  626 (710)
                      |+++| ++++.+|..|+||||+|+.. |+.+++++|++.|++++.++ ..|+||||+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~-g~~~~v~~Ll~~g~d~~~~d-~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARY-GHSEVVRLLLQNGADPNAKD-KDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHH-T-HHHHHHHHHCT--TT----TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHc-CcHHHHHHHHHCcCCCCCCc-CCCCCHHHhC
Confidence            34444 55555555555555555555 55555555555555555555 5555555554

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.44  E-value=4.2e-13  Score=143.01  Aligned_cols=106  Identities=32%  Similarity=0.358  Sum_probs=83.0

Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCCh
Q psy15068        553 SALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNR  632 (710)
Q Consensus       553 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~  632 (710)
                      +.|+.|+..|+.+++++|+++|+++|.+|..|+||||+|+.. |+.+++++|+++|++++.++ ..|.||||+|+..|+.
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~-g~~eiv~~LL~~Gadvn~~d-~~G~TpLh~A~~~g~~  161 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACAN-GHVQVVRVLLEFGADPTLLD-KDGKTPLELAEENGFR  161 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHC-CCHHHHHHHHHCCCCCCCCC-CCCCCHHHHHHHCCcH
Confidence            347777778888888888888888888888888888888887 88888888888888888777 7888888888888888


Q ss_pred             hHHHHHHhh-------hhccccCCCCCCCchhhHHH
Q psy15068        633 DIIDLLHLI-------DNLFASVTNPYDPNVYHRIE  661 (710)
Q Consensus       633 ~~v~~Ll~~-------g~~~~~~~~~g~t~L~~~A~  661 (710)
                      +++++|+++       |++++..+..|.+|+ ..+.
T Consensus       162 ~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~-~~~~  196 (664)
T PTZ00322        162 EVVQLLSRHSQCHFELGANAKPDSFTGKPPS-LEDS  196 (664)
T ss_pred             HHHHHHHhCCCcccccCCCCCccccCCCCcc-chhh
Confidence            888888777       777777777777777 5444

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.44  E-value=2.7e-13  Score=92.25  Aligned_cols=54  Identities=43%  Similarity=0.573  Sum_probs=33.7

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHH
Q psy15068        551 RGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLL  605 (710)
Q Consensus       551 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll  605 (710)
                      |.||||+|+..|+.+++++|+++|+|++.+|.+|+||||+|+.. |+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~-g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKN-GNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHT-T-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc-cCHHHHHHHC
Confidence            45677777777777777777777777777777777777777776 6777777664

...

>KOG0515|consensus

Probab=99.44  E-value=3.9e-13  Score=127.10  Aligned_cols=120  Identities=33%  Similarity=0.378  Sum_probs=100.1

Q ss_pred             hHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHH
Q psy15068         58 TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKN  137 (710)
Q Consensus        58 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~  137 (710)
                      -.|..|+..|-+|+|+..+..-. |+...+..|.|+||-|+..|+.+||++|++.|+++|..|++|+||||+|+.+++..
T Consensus       552 aLLLDaaLeGEldlVq~~i~ev~-DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~  630 (752)
T KOG0515|consen  552 ALLLDAALEGELDLVQRIIYEVT-DPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVP  630 (752)
T ss_pred             HHHHhhhhcchHHHHHHHHHhhc-CCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchH
Confidence            56788999999999999998888 99999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCccccc-cCCCchhHHhhhccCCCCCCHHHHHHHHH
Q psy15068        138 IVKFLLSKKADVRAKC-SMMVTPILAVSANMSEDSTDTNEIISMLI  182 (710)
Q Consensus       138 iv~~Ll~~g~~~~~~~-~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll  182 (710)
                      +++.|++.|+-+.... .++.|+..-+-    +..++...+.+||.
T Consensus       631 ~ckqLVe~GaavfAsTlSDmeTa~eKCe----e~eeGY~~CsqyL~  672 (752)
T KOG0515|consen  631 MCKQLVESGAAVFASTLSDMETAAEKCE----EMEEGYDQCSQYLY  672 (752)
T ss_pred             HHHHHHhccceEEeeecccccchhhhcc----hhhhhHHHHHHHHH
Confidence            9999999998775443 34455544332    22223666777664

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.44  E-value=6.4e-13  Score=141.58  Aligned_cols=106  Identities=30%  Similarity=0.377  Sum_probs=98.5

Q ss_pred             hHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHH
Q psy15068         58 TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKN  137 (710)
Q Consensus        58 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~  137 (710)
                      +.|+.|+..|+.++++.|++.|+ +++.+|..|+||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Ga-din~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~  162 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGA-DPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFRE  162 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCC-CCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHH
Confidence            45889999999999999999999 99999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhC-------CCCccccccCCCchhHHhh
Q psy15068        138 IVKFLLSK-------KADVRAKCSMMVTPILAVS  164 (710)
Q Consensus       138 iv~~Ll~~-------g~~~~~~~~~~~~~l~~a~  164 (710)
                      ++++|+++       |++.+..+..|.+|+....
T Consensus       163 iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        163 VVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS  196 (664)
T ss_pred             HHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence            99999998       8888888887887765443

>KOG1710|consensus

Probab=99.43  E-value=9.4e-13  Score=114.80  Aligned_cols=119  Identities=26%  Similarity=0.315  Sum_probs=108.5

Q ss_pred             hhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCcHHHHHHhcCC
Q psy15068        518 LNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNF-KSATGFTALHMACRFHS  596 (710)
Q Consensus       518 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~  596 (710)
                      ...+++.++..++.+-...|++--.++|.+|..|.|+|..|+..|+.+++++|++.|+|+|. .+..++||||+|+.+ |
T Consensus        12 ~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALS-G   90 (396)
T KOG1710|consen   12 PKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALS-G   90 (396)
T ss_pred             hhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHc-C
Confidence            34456677999999999999988777999999999999999999999999999999999985 467899999999999 9


Q ss_pred             chHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHH
Q psy15068        597 NDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL  638 (710)
Q Consensus       597 ~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L  638 (710)
                      +.++.++|++.|+.+...+ .-|+|+-.+|+.-|+-++|..+
T Consensus        91 n~dvcrllldaGa~~~~vN-svgrTAaqmAAFVG~H~CV~iI  131 (396)
T KOG1710|consen   91 NQDVCRLLLDAGARMYLVN-SVGRTAAQMAAFVGHHECVAII  131 (396)
T ss_pred             CchHHHHHHhccCcccccc-chhhhHHHHHHHhcchHHHHHH
Confidence            9999999999999999999 9999999999999998888766

>KOG1710|consensus

Probab=99.41  E-value=1.5e-12  Score=113.50  Aligned_cols=119  Identities=24%  Similarity=0.349  Sum_probs=69.3

Q ss_pred             cccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccc-cCCCCcHHHHHHHcC
Q psy15068         23 RHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEK-LQDGRTALYMAILQG  101 (710)
Q Consensus        23 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~g~t~L~~A~~~g  101 (710)
                      ...+|..++-.|..+-...|++.--.+|..|..|.|+|..|+..|+.+.|+.|++.|+ |+|-. +..+.||||+|+.+|
T Consensus        12 ~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~ga-DvN~~qhg~~YTpLmFAALSG   90 (396)
T KOG1710|consen   12 PKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGA-DVNDKQHGTLYTPLMFAALSG   90 (396)
T ss_pred             hhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCC-CcCcccccccccHHHHHHHcC
Confidence            4455555555566666666655443455566666666666666666666666666666 55533 335556666666666


Q ss_pred             cHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHH
Q psy15068        102 LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFL  142 (710)
Q Consensus       102 ~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~L  142 (710)
                      +.++.++|++.|+.....++-|+|+-..|+.-|+.++|..+
T Consensus        91 n~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iI  131 (396)
T KOG1710|consen   91 NQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAII  131 (396)
T ss_pred             CchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHH
Confidence            66666666666666555555666666666666665555544

>PF13606 Ank_3: Ankyrin repeat

Probab=98.82  E-value=5.7e-09  Score=59.72  Aligned_cols=28  Identities=43%  Similarity=0.669  Sum_probs=13.1

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHHcCCCCC
Q psy15068         90 GRTALYMAILQGLYKMVTLLIHHGANVN  117 (710)
Q Consensus        90 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~  117 (710)
                      |+||||+||+.|+.|++++|+++|+++|
T Consensus         2 G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    2 GNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            4444444444444444444444444443

>KOG0783|consensus

Probab=98.81  E-value=1.7e-09  Score=108.65  Aligned_cols=84  Identities=26%  Similarity=0.226  Sum_probs=49.7

Q ss_pred             CcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCch
Q psy15068        577 VNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNV  656 (710)
Q Consensus       577 ~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L  656 (710)
                      .|+.|..|+|+||+|+.. +.-+++++|+++|++++.+|...|+||||-|+..|+.+++-+|+++|+.+..+|..|.+||
T Consensus        45 anikD~~GR~alH~~~S~-~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglspl  123 (1267)
T KOG0783|consen   45 ANIKDRYGRTALHIAVSE-NKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPL  123 (1267)
T ss_pred             hhHHHhhccceeeeeecc-chhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHH
Confidence            345555566666666555 5555666666666666665555566666666666666666666666666666666666666


Q ss_pred             hhHHHH
Q psy15068        657 YHRIEL  662 (710)
Q Consensus       657 ~~~A~~  662 (710)
                       ...++
T Consensus       124 -q~~~r  128 (1267)
T KOG0783|consen  124 -QFLSR  128 (1267)
T ss_pred             -HHHhh
Confidence             55444

>PF13606 Ank_3: Ankyrin repeat

Probab=98.80  E-value=7.4e-09  Score=59.24  Aligned_cols=29  Identities=59%  Similarity=0.822  Sum_probs=27.3

Q ss_pred             CCCCHHHHHHhcCCHHHHHHHHhCCCCcc
Q psy15068        122 KGYTPLHLACYLGNKNIVKFLLSKKADVR  150 (710)
Q Consensus       122 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~  150 (710)
                      +|+||||+||..|+.++|++|+++|+++|
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            48999999999999999999999999986

>KOG0506|consensus

Probab=98.80  E-value=6.9e-09  Score=97.64  Aligned_cols=91  Identities=25%  Similarity=0.303  Sum_probs=75.6

Q ss_pred             cchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHhc
Q psy15068         55 VELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHH-GANVNDRDEKGYTPLHLACYL  133 (710)
Q Consensus        55 ~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~t~L~~A~~~  133 (710)
                      ++...+++|++.|++..++.+.-.|. |.+.+|.+.+|+||.||..|+.+++|+|++. +.+++.+|..|+|||.-|...
T Consensus       505 ~~~i~~~~aa~~GD~~alrRf~l~g~-D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F  583 (622)
T KOG0506|consen  505 DTVINVMYAAKNGDLSALRRFALQGM-DLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHF  583 (622)
T ss_pred             cchhhhhhhhhcCCHHHHHHHHHhcc-cccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhc
Confidence            45567888888888888888888888 8888888888888888888888888888876 778888888888888888888


Q ss_pred             CCHHHHHHHHhCC
Q psy15068        134 GNKNIVKFLLSKK  146 (710)
Q Consensus       134 g~~~iv~~Ll~~g  146 (710)
                      +|.+++++|-+..
T Consensus       584 ~h~~v~k~L~~~~  596 (622)
T KOG0506|consen  584 KHKEVVKLLEEAQ  596 (622)
T ss_pred             CcHHHHHHHHHHh
Confidence            8888888887753

>KOG0782|consensus

Probab=98.78  E-value=1.5e-08  Score=97.39  Aligned_cols=118  Identities=21%  Similarity=0.240  Sum_probs=96.7

Q ss_pred             HHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCC--CCCCCCCCCCHHHHHHhcCCHH
Q psy15068         60 LCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGAN--VNDRDEKGYTPLHLACYLGNKN  137 (710)
Q Consensus        60 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~~~t~L~~A~~~g~~~  137 (710)
                      +..|+..+++--++..-.+|. +.-.++.+..+.||+|+..|+.|+|+|++++|..  ++..|+.|.|+||.|+..++..
T Consensus       870 il~av~~~D~~klqE~h~~gg-~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~  948 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLNGG-SLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRA  948 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhcCC-ceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchH
Confidence            667777887777777777777 7888888888999999999999999999998743  4566788899999999999999


Q ss_pred             HHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHc
Q psy15068        138 IVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIEN  184 (710)
Q Consensus       138 iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~  184 (710)
                      +.++|++.|+.+...|..|.||-..|-+.+      +.++..+|-..
T Consensus       949 vc~~lvdagasl~ktd~kg~tp~eraqqa~------d~dlaayle~r  989 (1004)
T KOG0782|consen  949 VCQLLVDAGASLRKTDSKGKTPQERAQQAG------DPDLAAYLESR  989 (1004)
T ss_pred             HHHHHHhcchhheecccCCCChHHHHHhcC------CchHHHHHhhh
Confidence            999999999988888888888888888777      77777776543

>KOG0818|consensus

Probab=98.78  E-value=2.9e-08  Score=94.02  Aligned_cols=87  Identities=28%  Similarity=0.290  Sum_probs=79.8

Q ss_pred             hHHHHHHhcCCHHHHHHHHhcCCCCCccccC-CCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCH
Q psy15068         58 TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQ-DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNK  136 (710)
Q Consensus        58 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~  136 (710)
                      .-||..++.|+.++.-.||..|+ ++|..++ .|.||||.|++.|+..-+++|+-+||+++..|..|+||+.+|-..||-
T Consensus       135 rQLhasvRt~nlet~LRll~lGA-~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~  213 (669)
T KOG0818|consen  135 KQLHSSVRTGNLETCLRLLSLGA-QANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHH  213 (669)
T ss_pred             HHHHHHhhcccHHHHHHHHHccc-ccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCch
Confidence            35899999999999999999999 8887765 689999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhC
Q psy15068        137 NIVKFLLSK  145 (710)
Q Consensus       137 ~iv~~Ll~~  145 (710)
                      ++.+.|++.
T Consensus       214 ~laeRl~e~  222 (669)
T KOG0818|consen  214 ELAERLVEI  222 (669)
T ss_pred             HHHHHHHHH
Confidence            999998874

>KOG0783|consensus

Probab=98.75  E-value=7.5e-09  Score=104.24  Aligned_cols=98  Identities=29%  Similarity=0.312  Sum_probs=85.8

Q ss_pred             ChhhHHHHHHhhhc--cCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccC-CCCcHHHHHHHcCcHHHHHHHH
Q psy15068         34 SEEDAFGYFLQGII--NSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQ-DGRTALYMAILQGLYKMVTLLI  110 (710)
Q Consensus        34 ~~~~~~~~ll~~~~--~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll  110 (710)
                      +...-++-++++.+  -.|.+|..|+|+||.|+..|..++++||+++|. +++.+|. .|+||||.|+..|++|++-+|+
T Consensus        28 s~~Nqlk~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGi-dv~vqD~ESG~taLHRaiyyG~idca~lLL  106 (1267)
T KOG0783|consen   28 SEPNQLKGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGI-DVFVQDEESGYTALHRAIYYGNIDCASLLL  106 (1267)
T ss_pred             CChhHHHHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCc-eeeeccccccchHhhHhhhhchHHHHHHHH
Confidence            44445666666332  367889999999999999999999999999999 9998886 7999999999999999999999


Q ss_pred             HcCCCCCCCCCCCCCHHHHHHh
Q psy15068        111 HHGANVNDRDEKGYTPLHLACY  132 (710)
Q Consensus       111 ~~g~~~~~~~~~~~t~L~~A~~  132 (710)
                      .+|+.+...|++|.+||..-++
T Consensus       107 ~~g~SL~i~Dkeglsplq~~~r  128 (1267)
T KOG0783|consen  107 SKGRSLRIKDKEGLSPLQFLSR  128 (1267)
T ss_pred             hcCCceEEecccCCCHHHHHhh
Confidence            9999999999999999998776

>KOG0782|consensus

Probab=98.75  E-value=4e-08  Score=94.55  Aligned_cols=118  Identities=29%  Similarity=0.398  Sum_probs=87.1

Q ss_pred             HHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC--CcccCCCCCcHHHHHHhcCCchH
Q psy15068        522 FLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGAD--VNFKSATGFTALHMACRFHSNDN  599 (710)
Q Consensus       522 ~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~  599 (710)
                      +++++..+++--++....+|-++-.++.+-.|.||+|+..|+-++|+|++++|..  +++.|..|.|+||-|+.. ++..
T Consensus       870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~-~~r~  948 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQ-RNRA  948 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHh-cchH
Confidence            4555666666566666667777777777777888888888888888888877654  456677778888877777 7777


Q ss_pred             HHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhh
Q psy15068        600 IVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLI  641 (710)
Q Consensus       600 ~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~  641 (710)
                      +..+|++.|+.+-..+ ..|.||-.-|-+.|+.++..||-++
T Consensus       949 vc~~lvdagasl~ktd-~kg~tp~eraqqa~d~dlaayle~r  989 (1004)
T KOG0782|consen  949 VCQLLVDAGASLRKTD-SKGKTPQERAQQAGDPDLAAYLESR  989 (1004)
T ss_pred             HHHHHHhcchhheecc-cCCCChHHHHHhcCCchHHHHHhhh
Confidence            7788888888777777 7788888888888888877777654

>KOG0506|consensus

Probab=98.72  E-value=1.1e-08  Score=96.26  Aligned_cols=90  Identities=21%  Similarity=0.123  Sum_probs=85.8

Q ss_pred             ccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcH
Q psy15068         24 HHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLY  103 (710)
Q Consensus        24 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~  103 (710)
                      ...+.+|++.|+++.++.+.-.|.+.+.+|++.+|+||.|+..|++++|++|++.-..+++.+|.-|+|||.-|-..++.
T Consensus       507 ~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~  586 (622)
T KOG0506|consen  507 VINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHK  586 (622)
T ss_pred             hhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcH
Confidence            36789999999999999999999999999999999999999999999999999998779999999999999999999999


Q ss_pred             HHHHHHHHcC
Q psy15068        104 KMVTLLIHHG  113 (710)
Q Consensus       104 ~~v~~Ll~~g  113 (710)
                      +++++|-+.-
T Consensus       587 ~v~k~L~~~~  596 (622)
T KOG0506|consen  587 EVVKLLEEAQ  596 (622)
T ss_pred             HHHHHHHHHh
Confidence            9999998763

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.69  E-value=2.8e-08  Score=59.00  Aligned_cols=31  Identities=45%  Similarity=0.704  Sum_probs=16.4

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHHcCCCCCCCC
Q psy15068         90 GRTALYMAILQGLYKMVTLLIHHGANVNDRD  120 (710)
Q Consensus        90 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~  120 (710)
                      |+||||+|+..|+.+++++|+++|++++.+|
T Consensus         2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d   32 (33)
T PF00023_consen    2 GNTPLHYAAQRGHPDIVKLLLKHGADINARD   32 (33)
T ss_dssp             SBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred             cccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence            4555555555555555555555555555443

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.68  E-value=3.4e-08  Score=58.65  Aligned_cols=31  Identities=42%  Similarity=0.678  Sum_probs=16.3

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCcccC
Q psy15068        551 RGSALIYVAWKGYEEIVDLLLDNGADVNFKS  581 (710)
Q Consensus       551 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~  581 (710)
                      |.||||+|+..|+.+++++|+++|++++.+|
T Consensus         2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d   32 (33)
T PF00023_consen    2 GNTPLHYAAQRGHPDIVKLLLKHGADINARD   32 (33)
T ss_dssp             SBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred             cccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence            4455555555555555555555555555443

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0818|consensus

Probab=98.67  E-value=7.2e-08  Score=91.40  Aligned_cols=90  Identities=28%  Similarity=0.271  Sum_probs=81.4

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCCh
Q psy15068        554 ALIYVAWKGYEEIVDLLLDNGADVNFKS-ATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNR  632 (710)
Q Consensus       554 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~  632 (710)
                      -||..++.|+.+..--|+..|+++|..+ ..|.||||.|++. |+..=+++|+=+|+|+...+ ..|+||+.+|-..|+-
T Consensus       136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~-Gq~~Q~ElL~vYGAD~~a~d-~~GmtP~~~AR~~gH~  213 (669)
T KOG0818|consen  136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKA-GQILQAELLAVYGADPGAQD-SSGMTPVDYARQGGHH  213 (669)
T ss_pred             HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhc-cchhhhhHHhhccCCCCCCC-CCCCcHHHHHHhcCch
Confidence            4899999999999999999999999876 4699999999999 99999999999999999999 9999999999999999


Q ss_pred             hHHHHHHhhhhcc
Q psy15068        633 DIIDLLHLIDNLF  645 (710)
Q Consensus       633 ~~v~~Ll~~g~~~  645 (710)
                      ++.+-|++...++
T Consensus       214 ~laeRl~e~~y~v  226 (669)
T KOG0818|consen  214 ELAERLVEIQYEL  226 (669)
T ss_pred             HHHHHHHHHHHHH
Confidence            9988888765443

>KOG0705|consensus

Probab=98.51  E-value=2.8e-07  Score=89.31  Aligned_cols=92  Identities=26%  Similarity=0.290  Sum_probs=62.5

Q ss_pred             hhHHHHHhhhcCchHHHHHHHhcCCcc--c--ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHh
Q psy15068        518 LNLDFLKNVRSNKYDEVKKNIEDGACV--N--VSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACR  593 (710)
Q Consensus       518 ~~~~~~~~~~~~~~~~~~~ll~~~~~~--~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~  593 (710)
                      .+..++.+....++..+-.|+.+|...  |  ..+.+|+|+||+||..|+..+.++|+-+|+|+.++|..|+|+|.||-.
T Consensus       624 lgqqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~  703 (749)
T KOG0705|consen  624 LGQQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQ  703 (749)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhh
Confidence            345556666666677777777766432  2  224456677777777777777777777777777777777777777777


Q ss_pred             cCCchHHHHHHHHcCCC
Q psy15068        594 FHSNDNIVRKLLHHGAY  610 (710)
Q Consensus       594 ~~~~~~~v~~Ll~~g~~  610 (710)
                      . |..+++..|+++|..
T Consensus       704 a-~sqec~d~llq~gcp  719 (749)
T KOG0705|consen  704 A-GSQECIDVLLQYGCP  719 (749)
T ss_pred             c-ccHHHHHHHHHcCCC
Confidence            6 777777777777653

>KOG0705|consensus

Probab=98.48  E-value=4.7e-07  Score=87.78  Aligned_cols=93  Identities=32%  Similarity=0.390  Sum_probs=76.4

Q ss_pred             hHHHHHHhcCCHHHHHHHHhcCCC-CCc--cccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcC
Q psy15068         58 TLLCSAVWDNKIREVEFLLSTGDH-DVN--EKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLG  134 (710)
Q Consensus        58 t~L~~A~~~g~~~~v~~Ll~~~~~-~~~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g  134 (710)
                      .-|..|+...++-.+-.||.+|.. .+|  ..+.+|+|+||+||+.|+..+.++|+=+|+++..+|..|+|+|.||-+.|
T Consensus       626 qqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~  705 (749)
T KOG0705|consen  626 QQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAG  705 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcc
Confidence            346678888888888899988762 222  33557789999999999999999999889999999999999999999999


Q ss_pred             CHHHHHHHHhCCCCcc
Q psy15068        135 NKNIVKFLLSKKADVR  150 (710)
Q Consensus       135 ~~~iv~~Ll~~g~~~~  150 (710)
                      ..+++..|+.+|...+
T Consensus       706 sqec~d~llq~gcp~e  721 (749)
T KOG0705|consen  706 SQECIDVLLQYGCPDE  721 (749)
T ss_pred             cHHHHHHHHHcCCCcc
Confidence            9999999999887543

>KOG0511|consensus

Probab=98.48  E-value=6.1e-07  Score=82.33  Aligned_cols=70  Identities=29%  Similarity=0.235  Sum_probs=50.9

Q ss_pred             CcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchh
Q psy15068         91 RTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPI  160 (710)
Q Consensus        91 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l  160 (710)
                      .--|..||+.|+.|.|++|++.|.++|.+|....+||.+|+..||.++|++|+++||--+.-..+|...+
T Consensus        37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~  106 (516)
T KOG0511|consen   37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCH  106 (516)
T ss_pred             hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhh
Confidence            3457777777888888888777777777777777788888888888888888877775555455555443

>KOG0522|consensus

Probab=98.45  E-value=4.9e-07  Score=87.28  Aligned_cols=88  Identities=27%  Similarity=0.379  Sum_probs=69.7

Q ss_pred             hHHHHHHhcCCHHHHHHHHhcC-CCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCH
Q psy15068         58 TLLCSAVWDNKIREVEFLLSTG-DHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNK  136 (710)
Q Consensus        58 t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~  136 (710)
                      -|+|.++.....+-+..++... +..++.+|..|+||||+|++-|+.+.++.|+..|+++..+|+.|++|||.|+..|+.
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~  101 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNE  101 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCH
Confidence            4588888888777666644332 226778888888888888888888888888888888888888888888888888888


Q ss_pred             HHHHHHHhC
Q psy15068        137 NIVKFLLSK  145 (710)
Q Consensus       137 ~iv~~Ll~~  145 (710)
                      +++..++.+
T Consensus       102 q~i~~vlr~  110 (560)
T KOG0522|consen  102 QIITEVLRH  110 (560)
T ss_pred             HHHHHHHHH
Confidence            887777764

>KOG0522|consensus

Probab=98.38  E-value=9.2e-07  Score=85.45  Aligned_cols=86  Identities=26%  Similarity=0.339  Sum_probs=64.4

Q ss_pred             cHHHHHHHcCCHHHHHH-HHH-cCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCC
Q psy15068        553 SALIYVAWKGYEEIVDL-LLD-NGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGK  630 (710)
Q Consensus       553 t~L~~A~~~~~~~~v~~-Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~  630 (710)
                      -|+|+++.....+-... |.. .+..++..|..|+||||.|++- |+.+.++.|+.+|+++..++ ..|++|||.|+..|
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~L-g~~~~a~~Ll~a~Adv~~kN-~~gWs~L~EAv~~g   99 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRL-GHVEAARILLSAGADVSIKN-NEGWSPLHEAVSTG   99 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHh-cCHHHHHHHHhcCCCccccc-cccccHHHHHHHcC
Confidence            34888877765544433 332 3566777888888888888888 88888888888888888888 88888888888888


Q ss_pred             ChhHHHHHHh
Q psy15068        631 NRDIIDLLHL  640 (710)
Q Consensus       631 ~~~~v~~Ll~  640 (710)
                      +.+++..++.
T Consensus       100 ~~q~i~~vlr  109 (560)
T KOG0522|consen  100 NEQIITEVLR  109 (560)
T ss_pred             CHHHHHHHHH
Confidence            8877665554

>KOG2384|consensus

Probab=98.31  E-value=1.5e-06  Score=71.86  Aligned_cols=68  Identities=21%  Similarity=0.141  Sum_probs=52.4

Q ss_pred             hccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcC
Q psy15068         46 IINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHG  113 (710)
Q Consensus        46 ~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g  113 (710)
                      +.++|.+|..|+|+++.|+..|+.+.|.||+..|...+...|.+|.+++.+|-+.|..+.++.|.++-
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~   69 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEND   69 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHh
Confidence            34677778888888888888888888888888884377777888888888888888888888777763

>KOG0511|consensus

Probab=98.31  E-value=3.6e-06  Score=77.44  Aligned_cols=82  Identities=22%  Similarity=0.220  Sum_probs=54.3

Q ss_pred             HHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhH
Q psy15068        555 LIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDI  634 (710)
Q Consensus       555 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~  634 (710)
                      |-.||+.|.++.|++|++.|.++|.+|....+||.+|+.+ ||.++|++|+++|+--..-. -+|..++.-|..   ..+
T Consensus        40 lceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLc-GHe~vvklLLenGAiC~rdt-f~G~RC~YgaLn---d~I  114 (516)
T KOG0511|consen   40 LCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLC-GHEDVVKLLLENGAICSRDT-FDGDRCHYGALN---DRI  114 (516)
T ss_pred             HHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHc-CcHHHHHHHHHcCCcccccc-cCcchhhhhhhh---HHH
Confidence            5677777777777777777777777777777777777777 77777777777777544444 555554433332   333


Q ss_pred             HHHHHhh
Q psy15068        635 IDLLHLI  641 (710)
Q Consensus       635 v~~Ll~~  641 (710)
                      =+.|+++
T Consensus       115 R~mllsy  121 (516)
T KOG0511|consen  115 RRMLLSY  121 (516)
T ss_pred             HHHHHHH
Confidence            3455554

>KOG0521|consensus

Probab=98.27  E-value=4.8e-07  Score=96.08  Aligned_cols=85  Identities=14%  Similarity=0.032  Sum_probs=68.4

Q ss_pred             CCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh---cccccceeehhHHHHhhhcccchhHHHH
Q psy15068        617 KTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS---AKQLGLVHVFEIMKVVKNYAGETLIGVA  693 (710)
Q Consensus       617 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~~~~~~~~~~~G~t~l~~a  693 (710)
                      ..|.|+||.|+..+..-++++|+++|+++|..|..|+||| |.+...|+   +..| +..||+.  ++.|.+|.+||++|
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~pl-h~~~~~g~~~~~~~l-l~~~a~~--~a~~~~~~~~l~~a  729 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPL-HHATASGHTSIACLL-LKRGADP--NAFDPDGKLPLDIA  729 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcc-hhhhhhcccchhhhh-ccccccc--cccCccCcchhhHH
Confidence            5678888888888888888888888888888888888888 88888888   6677 7888888  88888888888888


Q ss_pred             hhhchhHHHHHH
Q psy15068        694 RKMNYSFLERLE  705 (710)
Q Consensus       694 ~~~~~~~~~~~~  705 (710)
                      .+..+.+..-|.
T Consensus       730 ~~~~~~d~~~l~  741 (785)
T KOG0521|consen  730 MEAANADIVLLL  741 (785)
T ss_pred             hhhccccHHHHH
Confidence            777655544443

>KOG3609|consensus

Probab=98.27  E-value=3.5e-06  Score=86.75  Aligned_cols=126  Identities=21%  Similarity=0.206  Sum_probs=104.8

Q ss_pred             cccccccchhhhhhcChhhHHHHHHhhh----ccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHH
Q psy15068         19 ESSYRHHHLFSEIMFSEEDAFGYFLQGI----INSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTAL   94 (710)
Q Consensus        19 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~----~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L   94 (710)
                      ..+.++.-+-.|+..|+...|+..++..    .++|-.|.-|+++|+.|+.+.+.|++++|++++- ..       ..+|
T Consensus        21 ~l~~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~-~~-------gdAL   92 (822)
T KOG3609|consen   21 DLNEGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSS-EE-------GDAL   92 (822)
T ss_pred             ccchhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcc-cc-------chHH
Confidence            3455667788999999999999999833    5789999999999999999999999999999865 22       4789


Q ss_pred             HHHHHcCcHHHHHHHHHcCCCC----------CCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCcccc
Q psy15068         95 YMAILQGLYKMVTLLIHHGANV----------NDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAK  152 (710)
Q Consensus        95 ~~A~~~g~~~~v~~Ll~~g~~~----------~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~  152 (710)
                      .+|+..|..++|+.++.+....          ...-..+.|||.+||..++.||+++|+++|+.+...
T Consensus        93 L~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~P  160 (822)
T KOG3609|consen   93 LLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIP  160 (822)
T ss_pred             HHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCC
Confidence            9999999999999999873222          112234689999999999999999999999987644

>KOG3609|consensus

Probab=98.25  E-value=3e-06  Score=87.27  Aligned_cols=86  Identities=23%  Similarity=0.173  Sum_probs=73.7

Q ss_pred             chhHHHHHHhcCCHHHHHHHHhcCC---CCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHh
Q psy15068         56 ELTLLCSAVWDNKIREVEFLLSTGD---HDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACY  132 (710)
Q Consensus        56 ~~t~L~~A~~~g~~~~v~~Ll~~~~---~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~  132 (710)
                      +......|+..|+.-.|+..++...   .++|..|.-|+++|+.|+.+.+.|++++|++++..+       .-+|.+|+.
T Consensus        25 ~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~   97 (822)
T KOG3609|consen   25 GEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIA   97 (822)
T ss_pred             hhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHH
Confidence            4456778999999999999988755   368889999999999999999999999999986544       358999999


Q ss_pred             cCCHHHHHHHHhCCCC
Q psy15068        133 LGNKNIVKFLLSKKAD  148 (710)
Q Consensus       133 ~g~~~iv~~Ll~~g~~  148 (710)
                      .|..+.|+.++.+...
T Consensus        98 ~~~v~~VE~ll~~~~~  113 (822)
T KOG3609|consen   98 VGSVPLVELLLVHFVD  113 (822)
T ss_pred             HHHHHHHHHHHhcccc
Confidence            9999999999987543

>KOG2384|consensus

Probab=98.24  E-value=3.4e-06  Score=69.82  Aligned_cols=68  Identities=24%  Similarity=0.278  Sum_probs=48.9

Q ss_pred             CcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCC
Q psy15068        542 ACVNVSSERRGSALIYVAWKGYEEIVDLLLDNG-ADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAY  610 (710)
Q Consensus       542 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~  610 (710)
                      .++|.+|..|+||++.|+..|+.+.+.||+.+| +++...|..|.+++.+|-+. |..++++.|.+...+
T Consensus         3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~-g~~~fvh~lfe~~~e   71 (223)
T KOG2384|consen    3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKG-GAQAFVHSLFENDRE   71 (223)
T ss_pred             CCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhc-ChHHHHHHHHHHhcc
Confidence            456777777777777777777777777777777 77777777777777777776 777777777766433

>KOG0521|consensus

Probab=98.12  E-value=2.8e-06  Score=90.40  Aligned_cols=87  Identities=39%  Similarity=0.400  Sum_probs=63.9

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhC
Q psy15068        550 RRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAG  629 (710)
Q Consensus       550 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~  629 (710)
                      .|.|+||.|+..+..-++++|+++|+++|..|..|+||||.+... |+...+..|+++|++++..+ .+|.+|+++|...
T Consensus       655 ~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~-g~~~~~~~ll~~~a~~~a~~-~~~~~~l~~a~~~  732 (785)
T KOG0521|consen  655 IGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATAS-GHTSIACLLLKRGADPNAFD-PDGKLPLDIAMEA  732 (785)
T ss_pred             cccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhh-cccchhhhhccccccccccC-ccCcchhhHHhhh
Confidence            467777777777777777777777777777777777777777777 77777777777777777777 7777777777665


Q ss_pred             CChhHHHHH
Q psy15068        630 KNRDIIDLL  638 (710)
Q Consensus       630 ~~~~~v~~L  638 (710)
                      .+.+++-++
T Consensus       733 ~~~d~~~l~  741 (785)
T KOG0521|consen  733 ANADIVLLL  741 (785)
T ss_pred             ccccHHHHH
Confidence            555544443

>KOG0520|consensus

Probab=97.91  E-value=1.2e-05  Score=84.95  Aligned_cols=128  Identities=24%  Similarity=0.210  Sum_probs=94.5

Q ss_pred             CCCccccchhHHHHHHhcCCHHHHHHHHhc-CCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHH
Q psy15068         49 SSSAKSVELTLLCSAVWDNKIREVEFLLST-GDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPL  127 (710)
Q Consensus        49 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L  127 (710)
                      +......|.+.+|.++..++..+++.+++- +. .....|..|.-.+|+|+..|....+....-.|..++.+|..|+|||
T Consensus       567 ~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~-~~~eld~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL  645 (975)
T KOG0520|consen  567 SSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGS-GDLELDRDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPL  645 (975)
T ss_pred             cccCCCcchHHHHHHHHHhHHHHHHHHhccccc-CchhhcccCCChhhHhhhcCCceeEEEEeecccccccccCCCCccc
Confidence            344555788999999999999999999886 54 5667777888888886666555555555556888999999999999


Q ss_pred             HHHHhcCCHHHHHHHHhCCCCcc------ccccCCCchhHHhhhccCCCCCCHHHHHHHHHH
Q psy15068        128 HLACYLGNKNIVKFLLSKKADVR------AKCSMMVTPILAVSANMSEDSTDTNEIISMLIE  183 (710)
Q Consensus       128 ~~A~~~g~~~iv~~Ll~~g~~~~------~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~  183 (710)
                      |+|+..|+..++..|++.|++..      .....|.|+-..|..+|      +..+..+|-+
T Consensus       646 ~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g------~~gia~~lse  701 (975)
T KOG0520|consen  646 HWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANG------HKGIAGYLSE  701 (975)
T ss_pred             chHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhccc------ccchHHHHhh
Confidence            99999999999999998776543      33445666666666666      5555555443

>KOG0520|consensus

Probab=97.72  E-value=1.6e-05  Score=83.97  Aligned_cols=116  Identities=12%  Similarity=0.005  Sum_probs=61.1

Q ss_pred             cCCCCCcHHHHHHhcCCchHHHHHHHHc-CCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHh-hhhccccCCCCCCCchh
Q psy15068        580 KSATGFTALHMACRFHSNDNIVRKLLHH-GAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHL-IDNLFASVTNPYDPNVY  657 (710)
Q Consensus       580 ~~~~g~t~L~~A~~~~~~~~~v~~Ll~~-g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~  657 (710)
                      ....|+|.+|+++.. +..-+++.+++- |......+ .+|...+|+++. ++.+..-+|+. .|..++.+|..|+||| 
T Consensus       570 ~~~r~~lllhL~a~~-lyawLie~~~e~~~~~~~eld-~d~qgV~hfca~-lg~ewA~ll~~~~~~ai~i~D~~G~tpL-  645 (975)
T KOG0520|consen  570 VNFRDMLLLHLLAEL-LYAWLIEKVIEWAGSGDLELD-RDGQGVIHFCAA-LGYEWAFLPISADGVAIDIRDRNGWTPL-  645 (975)
T ss_pred             CCCcchHHHHHHHHH-hHHHHHHHHhcccccCchhhc-ccCCChhhHhhh-cCCceeEEEEeecccccccccCCCCccc-
Confidence            344556666666655 555555555553 44444444 555555555333 33444333333 4556666666666666 


Q ss_pred             hHHHHhhh---cccccceeehhH----HHHhhhcccchhHHHHhhhchhH
Q psy15068        658 HRIELMNS---AKQLGLVHVFEI----MKVVKNYAGETLIGVARKMNYSF  700 (710)
Q Consensus       658 ~~A~~~~~---~~~L~~~~g~~~----~~~~~~~~G~t~l~~a~~~~~~~  700 (710)
                      |+|++.|+   +..| ...|++.    -++-.+..|.|+-.+|..+|+..
T Consensus       646 ~wAa~~G~e~l~a~l-~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~g  694 (975)
T KOG0520|consen  646 HWAAFRGREKLVASL-IELGADPGAVTDPSPETPGGKTAADLARANGHKG  694 (975)
T ss_pred             chHhhcCHHHHHHHH-HHhccccccccCCCCCCCCCCchhhhhhcccccc
Confidence            66666665   4444 4444333    00222355666666666666654

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=96.81  E-value=0.017  Score=48.63  Aligned_cols=139  Identities=13%  Similarity=0.099  Sum_probs=79.2

Q ss_pred             cccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCc
Q psy15068         23 RHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGL  102 (710)
Q Consensus        23 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~  102 (710)
                      ...-|..|++++.+.++++.-+...+.   -...++.+..||+..+.|+|+|+-++-.      -.+-.+....|...++
T Consensus        46 ~~CLl~HAVk~nmL~ILqkyke~L~~~---~~~~q~LFElAC~~qkydiV~WI~qnL~------i~~~~~iFdIA~~~kD  116 (192)
T PF03158_consen   46 MWCLLYHAVKYNMLSILQKYKEDLENE---RYLNQELFELACEEQKYDIVKWIGQNLH------IYNPEDIFDIAFAKKD  116 (192)
T ss_pred             HHHHHHHHHHcCcHHHHHHHHHHhhcc---hhHHHHHHHHHHHHccccHHHHHhhccC------CCCchhhhhhhhhccc
Confidence            345667777788888877776643211   2345677777888888888888744422      1223455666777776


Q ss_pred             HHHH----HHHHHcCCCCCCCCC--CCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHH
Q psy15068        103 YKMV----TLLIHHGANVNDRDE--KGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNE  176 (710)
Q Consensus       103 ~~~v----~~Ll~~g~~~~~~~~--~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~  176 (710)
                      .++.    ++++++..+-...|.  --..-|..|+..|-...+.-.+++|.+++.      +.|..|+.+.      +..
T Consensus       117 lsLyslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~yn------hRk  184 (192)
T PF03158_consen  117 LSLYSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYN------HRK  184 (192)
T ss_pred             hhHHHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhh------HHH
Confidence            6663    223333221111110  012345567777777777777777665542      4566666666      666


Q ss_pred             HHHHHH
Q psy15068        177 IISMLI  182 (710)
Q Consensus       177 ~~~~Ll  182 (710)
                      ++.+++
T Consensus       185 IL~yfi  190 (192)
T PF03158_consen  185 ILDYFI  190 (192)
T ss_pred             HHHHhh
Confidence            666554

These proteins may be involved in promoting survival of infected macrophages [].

>smart00248 ANK ankyrin repeats

Probab=96.70  E-value=0.0033  Score=35.60  Aligned_cols=23  Identities=39%  Similarity=0.579  Sum_probs=9.8

Q ss_pred             CcHHHHHHHcCcHHHHHHHHHcC
Q psy15068         91 RTALYMAILQGLYKMVTLLIHHG  113 (710)
Q Consensus        91 ~t~L~~A~~~g~~~~v~~Ll~~g  113 (710)
                      .||+|+|+..++.+++++|++.|
T Consensus         3 ~~~l~~~~~~~~~~~~~~ll~~~   25 (30)
T smart00248        3 RTPLHLAAENGNLEVVKLLLDKG   25 (30)
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcC
Confidence            34444444444444444444443

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>smart00248 ANK ankyrin repeats

Probab=96.64  E-value=0.0036  Score=35.42  Aligned_cols=29  Identities=55%  Similarity=0.788  Sum_probs=25.2

Q ss_pred             CCCCHHHHHHhcCCHHHHHHHHhCCCCcc
Q psy15068        122 KGYTPLHLACYLGNKNIVKFLLSKKADVR  150 (710)
Q Consensus       122 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~  150 (710)
                      .|.||+|+|+..++.+++++|+++|.+++
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~   29 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDKGADIN   29 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            36799999999999999999999887653

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>KOG2505|consensus

Probab=96.63  E-value=0.0042  Score=60.31  Aligned_cols=68  Identities=21%  Similarity=0.252  Sum_probs=55.0

Q ss_pred             hhcCchHHHHHHHhcCCccccc------CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHh
Q psy15068        526 VRSNKYDEVKKNIEDGACVNVS------SERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACR  593 (710)
Q Consensus       526 ~~~~~~~~~~~ll~~~~~~~~~------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~  593 (710)
                      ........+.+|.+++++.|..      +.-..|+||+|+..|..++|.+||+.|+|+.+.|..|.||..++..
T Consensus       399 kk~~~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~n  472 (591)
T KOG2505|consen  399 KKKPEPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSAN  472 (591)
T ss_pred             hccCchhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCccccccc
Confidence            4445577888899888877643      3346689999999999999999999999999999999999888763

>KOG2505|consensus

Probab=96.61  E-value=0.0036  Score=60.75  Aligned_cols=44  Identities=30%  Similarity=0.363  Sum_probs=29.1

Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Q psy15068         88 QDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLAC  131 (710)
Q Consensus        88 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~  131 (710)
                      ..-.|+||+|+..|..++|.+||+.|+|+...|..|.||...+.
T Consensus       428 ~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  428 YLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             cccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence            34456666666666666666666666666666666666666555

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=96.43  E-value=0.026  Score=48.99  Aligned_cols=121  Identities=22%  Similarity=0.281  Sum_probs=74.4

Q ss_pred             hHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHH
Q psy15068         58 TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKN  137 (710)
Q Consensus        58 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~  137 (710)
                      -.|..|+..-+.+-+.-++....        .-.+++-+|+..+..+++-+|+.+ .++...|        .|-..-...
T Consensus       155 isledAV~AsN~~~i~~~VtdKk--------dA~~Am~~si~~~K~dva~~lls~-f~ft~~d--------v~~~~~~~y  217 (284)
T PF06128_consen  155 ISLEDAVKASNYEEISNLVTDKK--------DAHQAMWLSIGNAKEDVALYLLSK-FNFTKQD--------VASMEKELY  217 (284)
T ss_pred             ccHHHHHhhcCHHHHHHHhcchH--------HHHHHHHHHhcccHHHHHHHHHhh-cceecch--------hhhcCcchh
Confidence            35667777777777766655432        224667777777777777777765 2222222        222222333


Q ss_pred             HHHHHHh-CCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCC-CcccC--CCCCCCCHHHHHHHhCCHHHHH
Q psy15068        138 IVKFLLS-KKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGA-NVREK--MPFTDFSPLHFAVVKKNLSVVE  213 (710)
Q Consensus       138 iv~~Ll~-~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~-~~~~~--~~~~~~~~l~~A~~~~~~~~v~  213 (710)
                      =++|+|+ +|+                          ...++++.+++|. +++.+  ...+|.|.|..|+.+++.+++.
T Consensus       218 dieY~LS~h~a--------------------------~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~  271 (284)
T PF06128_consen  218 DIEYLLSEHSA--------------------------SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIA  271 (284)
T ss_pred             hHHHHHhhcCC--------------------------cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHH
Confidence            4455553 232                          5667777777763 33322  2238889999999999999999


Q ss_pred             HHHhCCCC
Q psy15068        214 LLIKCKAD  221 (710)
Q Consensus       214 ~Ll~~g~~  221 (710)
                      .|+++|+-
T Consensus       272 ~Llk~GA~  279 (284)
T PF06128_consen  272 FLLKYGAI  279 (284)
T ss_pred             HHHHcCcc
Confidence            99999873

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=96.38  E-value=0.084  Score=44.65  Aligned_cols=46  Identities=24%  Similarity=0.313  Sum_probs=35.6

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHH
Q psy15068        554 ALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLH  606 (710)
Q Consensus       554 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~  606 (710)
                      -|..|+..|.+..+--.+++|-+++.      ++|..|+.. ++..++.+++.
T Consensus       146 hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~y-nhRkIL~yfi~  191 (192)
T PF03158_consen  146 HLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKY-NHRKILDYFIR  191 (192)
T ss_pred             HHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHh-hHHHHHHHhhc
Confidence            37778888888888888888877753      688888888 88888887764

These proteins may be involved in promoting survival of infected macrophages [].

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=95.78  E-value=0.067  Score=46.56  Aligned_cols=120  Identities=19%  Similarity=0.202  Sum_probs=83.7

Q ss_pred             HHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHH
Q psy15068        234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTH  313 (710)
Q Consensus       234 l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~  313 (710)
                      |.-|+...+.+.+..+....+        .-.++|.+++.++..+++.+|+.+ .++...        ..|....  .+.
T Consensus       157 ledAV~AsN~~~i~~~VtdKk--------dA~~Am~~si~~~K~dva~~lls~-f~ft~~--------dv~~~~~--~~y  217 (284)
T PF06128_consen  157 LEDAVKASNYEEISNLVTDKK--------DAHQAMWLSIGNAKEDVALYLLSK-FNFTKQ--------DVASMEK--ELY  217 (284)
T ss_pred             HHHHHhhcCHHHHHHHhcchH--------HHHHHHHHHhcccHHHHHHHHHhh-cceecc--------hhhhcCc--chh
Confidence            666777766666663443332        123788889988999999999875 112111        2222222  236


Q ss_pred             HHHHHhhcccccCCCCCCCCcchhhhhhccCCcccccHHHHHHHHHHHHHHHhcCC-CCCC---CCCCCCcHHHHHHHcC
Q psy15068        314 VAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTE-NINA---EGDDMITPLLFAAKHC  389 (710)
Q Consensus       314 ~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~-~~~~---~~~~~~t~L~~A~~~~  389 (710)
                      -++|+++.++.+.                                .++++++++|. ++|.   +-..|.|.|-.|+..+
T Consensus       218 dieY~LS~h~a~~--------------------------------kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~  265 (284)
T PF06128_consen  218 DIEYLLSEHSASY--------------------------------KVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYK  265 (284)
T ss_pred             hHHHHHhhcCCcH--------------------------------HHHHHHHhccccccchhhhccCCcchHHHhHHhcC
Confidence            7788888777664                                88899999984 5554   3458899999999999


Q ss_pred             CHHHHHHHHHcCCCC
Q psy15068        390 DLQSAKYLIQKGANV  404 (710)
Q Consensus       390 ~~~~~~~Ll~~g~~~  404 (710)
                      +.+++.+|+++|+-.
T Consensus       266 ~~emi~~Llk~GA~~  280 (284)
T PF06128_consen  266 NSEMIAFLLKYGAIS  280 (284)
T ss_pred             cHHHHHHHHHcCccc
Confidence            999999999999843

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PLN03218 maturation of RBCL 1; Provisional

Probab=93.58  E-value=18  Score=41.97  Aligned_cols=173  Identities=10%  Similarity=0.030  Sum_probs=75.6

Q ss_pred             HHHcCcHHHHHHHHHcCCCCCCCCCCC-CCHHHHHHhcCCHHHH----HHHHhCCCCccccccCCCchhHHhhhccCCCC
Q psy15068         97 AILQGLYKMVTLLIHHGANVNDRDEKG-YTPLHLACYLGNKNIV----KFLLSKKADVRAKCSMMVTPILAVSANMSEDS  171 (710)
Q Consensus        97 A~~~g~~~~v~~Ll~~g~~~~~~~~~~-~t~L~~A~~~g~~~iv----~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~  171 (710)
                      +++.|..+-+..+.+.-..+   |..- .+.|...+..|+.+-+    +.+.+.|..++....  .+.+...+..|..+ 
T Consensus       416 ~~~~g~~~eAl~lf~~M~~p---d~~Tyn~LL~a~~k~g~~e~A~~lf~~M~~~Gl~pD~~ty--nsLI~~y~k~G~vd-  489 (1060)
T PLN03218        416 CKKQRAVKEAFRFAKLIRNP---TLSTFNMLMSVCASSQDIDGALRVLRLVQEAGLKADCKLY--TTLISTCAKSGKVD-  489 (1060)
T ss_pred             HHHCCCHHHHHHHHHHcCCC---CHHHHHHHHHHHHhCcCHHHHHHHHHHHHHcCCCCCHHHH--HHHHHHHHhCcCHH-
Confidence            44556555544444432222   2111 2334444556665433    334445554432221  12333444444110 


Q ss_pred             CCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHH----HHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHH
Q psy15068        172 TDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSV----VELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVE  247 (710)
Q Consensus       172 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~----v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~  247 (710)
                       .-.++++.+.+.|..++..   .-.+.+...++.|..+-    ++.+.+.|..++..   ..+.++...++.|..+...
T Consensus       490 -~A~~vf~eM~~~Gv~Pdvv---TynaLI~gy~k~G~~eeAl~lf~~M~~~Gv~PD~v---TYnsLI~a~~k~G~~deA~  562 (1060)
T PLN03218        490 -AMFEVFHEMVNAGVEANVH---TFGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRV---VFNALISACGQSGAVDRAF  562 (1060)
T ss_pred             -HHHHHHHHHHHcCCCCCHH---HHHHHHHHHHHCcCHHHHHHHHHHHHHcCCCCCHH---HHHHHHHHHHHCCCHHHHH
Confidence             0223445555566544332   22233444556666543    34444556555432   2334355566667666544


Q ss_pred             HHHcc-----CCCccccCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy15068        248 AFLNS-----KNFDVSISDGDLNSLLHKACHVGNLQIVQMLV  284 (710)
Q Consensus       248 ~lL~~-----~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll  284 (710)
                      .++.+     .+..++..  ...+.+...++.|+++-...++
T Consensus       563 ~lf~eM~~~~~gi~PD~v--TynaLI~ay~k~G~ldeA~elf  602 (1060)
T PLN03218        563 DVLAEMKAETHPIDPDHI--TVGALMKACANAGQVDRAKEVY  602 (1060)
T ss_pred             HHHHHHHHhcCCCCCcHH--HHHHHHHHHHHCCCHHHHHHHH
Confidence            34322     22222221  1124555566667765444433

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=93.37  E-value=0.16  Score=37.07  Aligned_cols=47  Identities=17%  Similarity=0.171  Sum_probs=30.2

Q ss_pred             hHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHc
Q psy15068         58 TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHH  112 (710)
Q Consensus        58 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~  112 (710)
                      +.+..|+..|+.||++.+++.+.  ++      ...+..|+...+-+++++|+++
T Consensus         8 ~tl~~Ai~GGN~eII~~c~~~~~--~~------~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    8 KTLEYAIIGGNFEIINICLKKNK--PD------NDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHhc--cH------HHHHHHHHHHhhHHHHHHHHHh
Confidence            45667777777777777765543  11      2447777777777777777665

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=92.51  E-value=0.34  Score=35.27  Aligned_cols=66  Identities=9%  Similarity=0.025  Sum_probs=50.7

Q ss_pred             ccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcH
Q psy15068         24 HHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLY  103 (710)
Q Consensus        24 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~  103 (710)
                      ...+..|+..|+.+|++.+++.+ .++      ...+..|+..-+-|++++|+++..  ..       -++..+...++.
T Consensus         7 ~~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~y~--~~-------i~~~~~~~~~N~   70 (76)
T PF11929_consen    7 KKTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIENYN--LK-------ISISDCLKYYNL   70 (76)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHhcC--CC-------cCHHHHHHHCCh
Confidence            46789999999999999999766 332      467999999999999999999854  21       125556666666


Q ss_pred             HH
Q psy15068        104 KM  105 (710)
Q Consensus       104 ~~  105 (710)
                      +.
T Consensus        71 ~a   72 (76)
T PF11929_consen   71 RA   72 (76)
T ss_pred             Hh
Confidence            54

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>PLN03218 maturation of RBCL 1; Provisional

Probab=86.83  E-value=70  Score=37.37  Aligned_cols=213  Identities=5%  Similarity=-0.038  Sum_probs=107.2

Q ss_pred             HHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHH----HcCCCCCCCCCCCCCHHHHHHhcCCHH
Q psy15068         62 SAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLI----HHGANVNDRDEKGYTPLHLACYLGNKN  137 (710)
Q Consensus        62 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll----~~g~~~~~~~~~~~t~L~~A~~~g~~~  137 (710)
                      ..++.|..+-...+++.-. .++..  .-.+.|..+++.|+.+.+..++    +.|..++...  ..+.+...+..|..+
T Consensus       415 ~~~~~g~~~eAl~lf~~M~-~pd~~--Tyn~LL~a~~k~g~~e~A~~lf~~M~~~Gl~pD~~t--ynsLI~~y~k~G~vd  489 (1060)
T PLN03218        415 ACKKQRAVKEAFRFAKLIR-NPTLS--TFNMLMSVCASSQDIDGALRVLRLVQEAGLKADCKL--YTTLISTCAKSGKVD  489 (1060)
T ss_pred             HHHHCCCHHHHHHHHHHcC-CCCHH--HHHHHHHHHHhCcCHHHHHHHHHHHHHcCCCCCHHH--HHHHHHHHHhCcCHH
Confidence            3455677776666666544 22211  1234566677888876655544    4465544321  234455566778876


Q ss_pred             HHH----HHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHH
Q psy15068        138 IVK----FLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVE  213 (710)
Q Consensus       138 iv~----~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~  213 (710)
                      -+.    .+.+.|..++....  .+.+...+..|.-.  .-.++.+.+.+.|..++..   .-.+.+...++.|..+-+.
T Consensus       490 ~A~~vf~eM~~~Gv~PdvvTy--naLI~gy~k~G~~e--eAl~lf~~M~~~Gv~PD~v---TYnsLI~a~~k~G~~deA~  562 (1060)
T PLN03218        490 AMFEVFHEMVNAGVEANVHTF--GALIDGCARAGQVA--KAFGAYGIMRSKNVKPDRV---VFNALISACGQSGAVDRAF  562 (1060)
T ss_pred             HHHHHHHHHHHcCCCCCHHHH--HHHHHHHHHCcCHH--HHHHHHHHHHHcCCCCCHH---HHHHHHHHHHHCCCHHHHH
Confidence            444    44455655543322  12344444444111  0233455666677665432   2234455566777776555


Q ss_pred             HHHh------CCCCcchhhccCCChhHHHHHhcCcHHHHHHHH---ccCCCccccCCCCCCcHHHHHHHcCCHHHHH---
Q psy15068        214 LLIK------CKADTNLIVKVNQEPLLFFAIESNSVKIVEAFL---NSKNFDVSISDGDLNSLLHKACHVGNLQIVQ---  281 (710)
Q Consensus       214 ~Ll~------~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL---~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~---  281 (710)
                      .+++      .|..++   ......++...++.|..+....++   .+.+..++..  ...+.+...++.|+.+...   
T Consensus       563 ~lf~eM~~~~~gi~PD---~vTynaLI~ay~k~G~ldeA~elf~~M~e~gi~p~~~--tynsLI~ay~k~G~~deAl~lf  637 (1060)
T PLN03218        563 DVLAEMKAETHPIDPD---HITVGALMKACANAGQVDRAKEVYQMIHEYNIKGTPE--VYTIAVNSCSQKGDWDFALSIY  637 (1060)
T ss_pred             HHHHHHHHhcCCCCCc---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCChH--HHHHHHHHHHhcCCHHHHHHHH
Confidence            4443      233333   223344466677888876555343   3333332221  1224555666777755443   


Q ss_pred             -HHHHcCCCCC
Q psy15068        282 -MLVKRKFDIN  291 (710)
Q Consensus       282 -~Ll~~g~~~~  291 (710)
                       .+.+.|..++
T Consensus       638 ~eM~~~Gv~PD  648 (1060)
T PLN03218        638 DDMKKKGVKPD  648 (1060)
T ss_pred             HHHHHcCCCCC
Confidence             4444565543

>PLN03077 Protein ECB2; Provisional

Probab=81.46  E-value=1.1e+02  Score=35.28  Aligned_cols=163  Identities=10%  Similarity=0.011  Sum_probs=71.8

Q ss_pred             hhcCchHHHHHHHhcCCcccccCCCCCcH-HHHHHHcCCHH----HHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHH
Q psy15068        526 VRSNKYDEVKKNIEDGACVNVSSERRGSA-LIYVAWKGYEE----IVDLLLDNGADVNFKSATGFTALHMACRFHSNDNI  600 (710)
Q Consensus       526 ~~~~~~~~~~~ll~~~~~~~~~~~~g~t~-L~~A~~~~~~~----~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~  600 (710)
                      .+.+.++-...+++..    .+|...++. +...+..|..+    +++.+.+.|..+|...   .+.+..|+...|..+-
T Consensus       535 ~k~G~~~~A~~~f~~~----~~d~~s~n~lI~~~~~~G~~~~A~~lf~~M~~~g~~Pd~~T---~~~ll~a~~~~g~v~e  607 (857)
T PLN03077        535 VRCGRMNYAWNQFNSH----EKDVVSWNILLTGYVAHGKGSMAVELFNRMVESGVNPDEVT---FISLLCACSRSGMVTQ  607 (857)
T ss_pred             HHcCCHHHHHHHHHhc----CCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCccc---HHHHHHHHhhcChHHH
Confidence            4455555554444432    222222333 33334556553    4444455677766433   3444445544365543


Q ss_pred             HH----HHH-HcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhh-hhccccCCCCCCCchhhHHHHhhh--------c
Q psy15068        601 VR----KLL-HHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLI-DNLFASVTNPYDPNVYHRIELMNS--------A  666 (710)
Q Consensus       601 v~----~Ll-~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~~A~~~~~--------~  666 (710)
                      ..    .+. ++|..++...   =..-+..-.+.|+.+-..-+++. +..   .|..-+++| --|+....        +
T Consensus       608 a~~~f~~M~~~~gi~P~~~~---y~~lv~~l~r~G~~~eA~~~~~~m~~~---pd~~~~~aL-l~ac~~~~~~e~~e~~a  680 (857)
T PLN03077        608 GLEYFHSMEEKYSITPNLKH---YACVVDLLGRAGKLTEAYNFINKMPIT---PDPAVWGAL-LNACRIHRHVELGELAA  680 (857)
T ss_pred             HHHHHHHHHHHhCCCCchHH---HHHHHHHHHhCCCHHHHHHHHHHCCCC---CCHHHHHHH-HHHHHHcCChHHHHHHH
Confidence            33    333 3444443221   01122333466766555555543 332   233445556 44443322        2


Q ss_pred             ccccceeehhHHHHhhhcccchhH---HHHhhhchhHHHHHHHhhcC
Q psy15068        667 KQLGLVHVFEIMKVVKNYAGETLI---GVARKMNYSFLERLEEVLTE  710 (710)
Q Consensus       667 ~~L~~~~g~~~~~~~~~~~G~t~l---~~a~~~~~~~~~~~~~~~~~  710 (710)
                      +.| ++-       .++..|...+   -+|..+...+..++++.|.+
T Consensus       681 ~~l-~~l-------~p~~~~~y~ll~n~ya~~g~~~~a~~vr~~M~~  719 (857)
T PLN03077        681 QHI-FEL-------DPNSVGYYILLCNLYADAGKWDEVARVRKTMRE  719 (857)
T ss_pred             HHH-Hhh-------CCCCcchHHHHHHHHHHCCChHHHHHHHHHHHH
Confidence            222 211       1122222222   35555556678888887753

>PLN03077 Protein ECB2; Provisional

Probab=80.67  E-value=1.2e+02  Score=35.08  Aligned_cols=47  Identities=15%  Similarity=0.117  Sum_probs=26.6

Q ss_pred             HHHHHcCCHHHHHHHHHc-CCCCcccCCCCCcHHHHHHhcCCchHHHHHHH
Q psy15068        556 IYVAWKGYEEIVDLLLDN-GADVNFKSATGFTALHMACRFHSNDNIVRKLL  605 (710)
Q Consensus       556 ~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll  605 (710)
                      ..-++.|..+-+.-+++. +..+   |..-++.|.-|+..+++.++.+...
T Consensus       633 ~~l~r~G~~~eA~~~~~~m~~~p---d~~~~~aLl~ac~~~~~~e~~e~~a  680 (857)
T PLN03077        633 DLLGRAGKLTEAYNFINKMPITP---DPAVWGALLNACRIHRHVELGELAA  680 (857)
T ss_pred             HHHHhCCCHHHHHHHHHHCCCCC---CHHHHHHHHHHHHHcCChHHHHHHH
Confidence            334456776655555554 3333   3334566777776667777655443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	710
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		1e-17
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		3e-07
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		1e-06
1uoh_A	226	Human Gankyrin Length = 226		2e-17
1uoh_A	226	Human Gankyrin Length = 226		3e-07
1uoh_A	226	Human Gankyrin Length = 226		1e-06
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		2e-17
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		7e-10
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		3e-17
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		7e-08
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		3e-17
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		7e-08
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		4e-17
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		9e-11
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		4e-10
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		6e-17
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-12
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		1e-10
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		8e-16
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-09
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		4e-15
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		1e-12
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		4e-10
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-09
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		1e-14
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		5e-10
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		1e-08
2xee_A	157	Structural Determinants For Improved Thermal Stabil		2e-14
2xee_A	157	Structural Determinants For Improved Thermal Stabil		1e-11
2xee_A	157	Structural Determinants For Improved Thermal Stabil		1e-08
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		3e-14
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		2e-12
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		4e-09
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		5e-14
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		2e-12
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		1e-08
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		5e-14
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		2e-11
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		3e-07
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		8e-14
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		3e-08
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		6e-13
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		2e-09
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		9e-13
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		7e-11
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		1e-08
1svx_A	169	Crystal Structure Of A Designed Selected Ankyrin Re		1e-12
1svx_A	169	Crystal Structure Of A Designed Selected Ankyrin Re		6e-08
1svx_A	169	Crystal Structure Of A Designed Selected Ankyrin Re		2e-07
4b93_B	269	Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyri		1e-12
4b93_B	269	Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyri		1e-04
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		5e-12
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		4e-07
2v5q_C	167	Crystal Structure Of Wild-type Plk-1 Kinase Domain		5e-12
2v5q_C	167	Crystal Structure Of Wild-type Plk-1 Kinase Domain		6e-10
2v5q_C	167	Crystal Structure Of Wild-type Plk-1 Kinase Domain		2e-07
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		6e-12
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		4e-08
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		2e-11
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		9e-08
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		2e-11
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		6e-09
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		6e-06
2rfm_A	192	Structure Of A Thermophilic Ankyrin Repeat Protein		2e-11
2rfm_A	192	Structure Of A Thermophilic Ankyrin Repeat Protein		1e-07
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		3e-11
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		1e-09
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		1e-06
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		6e-05
2dzn_A	228	Crystal Structure Analysis Of Yeast Nas6p Complexed		3e-11
1ixv_A	231	Crystal Structure Analysis Of Homolog Of Oncoprotei		4e-11
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		4e-11
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		2e-07
1wg0_A	243	Structural Comparison Of Nas6p Protein Structures I		4e-11
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		4e-11
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		2e-09
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		5e-11
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		6e-04
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		6e-11
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		8e-09
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		5e-06
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		1e-10
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		1e-07
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		3e-07
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		2e-10
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		7e-08
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		3e-10
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		3e-05
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		7e-04
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		3e-10
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		1e-08
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		3e-06
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		7e-10
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		2e-06
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		1e-09
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		2e-06
2bkk_B	169	Crystal Structure Of Aminoglycoside Phosphotransfer		2e-09
2bkk_B	169	Crystal Structure Of Aminoglycoside Phosphotransfer		2e-05
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		2e-09
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		8e-09
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		2e-07
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		3e-09
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		5e-07
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		3e-09
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		1e-06
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		2e-06
4g8k_A	337	Intact Sensor Domain Of Human Rnase L In The Inacti		4e-09
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		8e-09
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		4e-06
1wdy_A	285	Crystal Structure Of Ribonuclease Length = 285		1e-08
3eu9_A	240	The Ankyrin Repeat Domain Of Huntingtin Interacting		1e-08
3eu9_A	240	The Ankyrin Repeat Domain Of Huntingtin Interacting		1e-07
1k1b_A	241	Crystal Structure Of The Ankyrin Repeat Domain Of B		2e-08
4grg_A	135	Crystal Structure Of Ige Complexed With E2_79, An A		2e-07
3hg0_D	136	Crystal Structure Of A Darpin In Complex With Orf49		2e-07
3hg0_D	136	Crystal Structure Of A Darpin In Complex With Orf49		5e-07
3twu_A	167	Crystal Structure Of Arc4 From Human Tankyrase 2 In		2e-07
3twu_A	167	Crystal Structure Of Arc4 From Human Tankyrase 2 In		3e-04
3twr_A	165	Crystal Structure Of Arc4 From Human Tankyrase 2 In		2e-07
3twr_A	165	Crystal Structure Of Arc4 From Human Tankyrase 2 In		4e-04
3twq_A	175	Crystal Structure Of Arc4 From Human Tankyrase 2 (A		3e-07
3twq_A	175	Crystal Structure Of Arc4 From Human Tankyrase 2 (A		4e-04
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		6e-07
1awc_B	153	Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 1		9e-07
1awc_B	153	Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 1		7e-06
3zkj_A	261	Crystal Structure Of Ankyrin Repeat And Socs Box-co		9e-07
3zkj_A	261	Crystal Structure Of Ankyrin Repeat And Socs Box-co		1e-06
3zkj_A	261	Crystal Structure Of Ankyrin Repeat And Socs Box-co		2e-06
4a63_B	239	Crystal Structure Of The P73-Aspp2 Complex At 2.6a		1e-06
1ycs_B	239	P53-53bp2 Complex Length = 239		1e-06
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		1e-06
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		2e-04
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		3e-04
1nfi_E	213	I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213		1e-06
3f6q_A	179	Crystal Structure Of Integrin-Linked Kinase Ankyrin		1e-06
3f6q_A	179	Crystal Structure Of Integrin-Linked Kinase Ankyrin		2e-04
3d9h_A	285	Crystal Structure Of The Splice Variant Of Human As		1e-06
3d9h_A	285	Crystal Structure Of The Splice Variant Of Human As		1e-05
2kbx_A	171	Solution Structure Of Ilk-Pinch Complex Length = 17		2e-06
2kbx_A	171	Solution Structure Of Ilk-Pinch Complex Length = 17		2e-04
1ikn_D	236	IkappabalphaNF-Kappab Complex Length = 236		2e-06
3aaa_C	123	Crystal Structure Of Actin Capping Protein In Compl		2e-06
1oy3_D	282	Crystal Structure Of An IkbbetaNF-Kb P65 Homodimer		3e-06
1k3z_D	282	X-Ray Crystal Structure Of The IkbbNF-Kb P65 Homodi		3e-06
1myo_A	118	Solution Structure Of Myotrophin, Nmr, 44 Structure		3e-06
2xen_A	91	Structural Determinants For Improved Thermal Stabil		5e-06
2xen_A	91	Structural Determinants For Improved Thermal Stabil		6e-05
1ot8_A	239	Structure Of The Ankyrin Domain Of The Drosophila N		3e-05
1ot8_A	239	Structure Of The Ankyrin Domain Of The Drosophila N		1e-04
3t9k_A	390	Crystal Structure Of Acap1 C-portion Mutant S554d F		4e-05
4f1p_A	368	Crystal Structure Of Mutant S554d For Arfgap And An		4e-05
3jue_A	368	Crystal Structure Of Arfgap And Ank Repeat Domain O		4e-05
3v2o_A	183	Crystal Structure Of The Peptide Bound Complex Of T		4e-05
2vge_A	229	Crystal Structure Of The C-Terminal Region Of Human		6e-05
3uxg_A	172	Crystal Structure Of Rfxank Length = 172		7e-05
4hbd_A	276	Crystal Structure Of Kank2 Ankyrin Repeats Length =		1e-04
4hbd_A	276	Crystal Structure Of Kank2 Ankyrin Repeats Length =		1e-04
3so8_A	162	Crystal Structure Of Ankra Length = 162		1e-04
3v2x_A	167	Crystal Structure Of The Peptide Bound Complex Of T		1e-04
2zgg_A	92	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		2e-04
2fo1_E	373	Crystal Structure Of The Csl-Notch-Mastermind Terna		5e-04
2zgd_A	110	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		5e-04
1ap7_A	168	P19-Ink4d From Mouse, Nmr, 20 Structures Length = 1		5e-04
3hra_A	201	Crystal Structure Of Ef0377 An Ankyrin Repeat Prote		6e-04
1blx_B	166	P19ink4dCDK6 COMPLEX Length = 166		6e-04

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 59  LLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVND 118
           ++C+  +  K+ E++  +           QD RTAL+ A   G  ++V  L+  G  VND
Sbjct: 10  MVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVND 69
Query: 119 RDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEII 178
           +D+ G++PLH+A   G   IVK LL K A V A      TP+   +      S + +EI 
Sbjct: 70  KDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAA------SKNRHEIA 123
Query: 179 SMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAI 238
            ML+E GAN   K  + + + +H A  K NL ++ +L+  KA TN               
Sbjct: 124 VMLLEGGANPDAKDHY-EATAMHRAAAKGNLKMIHILLYYKASTN--------------- 167
Query: 239 ESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFL 298
                               I D + N+ LH AC    ++  ++LV +   I  +N+   
Sbjct: 168 --------------------IQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEK 207
Query: 299 PPMFFAIG 306
            P+  A G
Sbjct: 208 TPLQVAKG 215

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 33/227 (14%)
Query: 406 LTETQKAFISD---ARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKP 462
           L E +++ ++D   A  +D   R+AL +AC    + E+V+ LL  G  VND  +     P
Sbjct: 20  LEELKESILADKSLATRTDQDSRTALHWACS-AGHTEIVEFLLQLGVPVNDKDD-AGWSP 77
Query: 463 LAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERXXXXXXXXXXXXX 522
           L +A  +G  +IVK L   GAQ++  N           +  T L                
Sbjct: 78  LHIAASAGRDEIVKALLGKGAQVNAVNQ----------NGCTPLH--------------- 112
Query: 523 XXXVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSA 582
                 N+++     +E GA  +       +A+   A KG  +++ +LL   A  N +  
Sbjct: 113 -YAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDT 171
Query: 583 TGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAG 629
            G T LH+AC     +   + L+  GA   +++ K  KTPL+ A+ G
Sbjct: 172 EGNTPLHLACDEERVEE-AKLLVSQGASIYIEN-KEEKTPLQVAKGG 216

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 9/181 (4%)
Query: 528 SNKYDEVKKNI-EDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           S K +E+K++I  D +    + +   +AL +    G+ EIV+ LL  G  VN K   G++
Sbjct: 17  SGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWS 76
Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRXXXXXXXXXXNLFA 646
            LH+A      D IV+ LL  GA  +  + + G TPL +A A KNR              
Sbjct: 77  PLHIAASA-GRDEIVKALLGKGAQVNAVN-QNGCTPLHYA-ASKNRHEIAVMLLEGGANP 133
Query: 647 SVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYSFLERLEE 706
              + Y+    HR     + K + ++  ++    +++  G T + +A        ER+EE
Sbjct: 134 DAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDE-----ERVEE 188
Query: 707 V 707
Sbjct: 189 A 189

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 59  LLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVND 118
           ++C+  +  K+ E++  +           QD RTAL+ A   G  ++V  L+  G  VND
Sbjct: 9   MVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVND 68
Query: 119 RDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEII 178
           +D+ G++PLH+A   G   IVK LL K A V A      TP+   +      S + +EI 
Sbjct: 69  KDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAA------SKNRHEIA 122
Query: 179 SMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAI 238
            ML+E GAN   K  + + + +H A  K NL ++ +L+  KA TN               
Sbjct: 123 VMLLEGGANPDAKDHY-EATAMHRAAAKGNLKMIHILLYYKASTN--------------- 166
Query: 239 ESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFL 298
                               I D + N+ LH AC    ++  ++LV +   I  +N+   
Sbjct: 167 --------------------IQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEK 206
Query: 299 PPMFFAIG 306
            P+  A G
Sbjct: 207 TPLQVAKG 214

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 33/227 (14%)
Query: 406 LTETQKAFISD---ARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKP 462
           L E +++ ++D   A  +D   R+AL +AC    + E+V+ LL  G  VND  +     P
Sbjct: 19  LEELKESILADKSLATRTDQDSRTALHWACS-AGHTEIVEFLLQLGVPVNDKDD-AGWSP 76
Query: 463 LAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERXXXXXXXXXXXXX 522
           L +A  +G  +IVK L   GAQ++  N           +  T L                
Sbjct: 77  LHIAASAGRDEIVKALLGKGAQVNAVNQ----------NGCTPLH--------------- 111
Query: 523 XXXVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSA 582
                 N+++     +E GA  +       +A+   A KG  +++ +LL   A  N +  
Sbjct: 112 -YAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDT 170
Query: 583 TGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAG 629
            G T LH+AC     +   + L+  GA   +++ K  KTPL+ A+ G
Sbjct: 171 EGNTPLHLACDEERVEE-AKLLVSQGASIYIEN-KEEKTPLQVAKGG 215

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 9/181 (4%)
Query: 528 SNKYDEVKKNI-EDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           S K +E+K++I  D +    + +   +AL +    G+ EIV+ LL  G  VN K   G++
Sbjct: 16  SGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWS 75
Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRXXXXXXXXXXNLFA 646
            LH+A      D IV+ LL  GA  +  + + G TPL +A A KNR              
Sbjct: 76  PLHIAASA-GRDEIVKALLGKGAQVNAVN-QNGCTPLHYA-ASKNRHEIAVMLLEGGANP 132
Query: 647 SVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYSFLERLEE 706
              + Y+    HR     + K + ++  ++    +++  G T + +A        ER+EE
Sbjct: 133 DAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDE-----ERVEE 187
Query: 707 V 707
Sbjct: 188 A 188

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 164/393 (41%), Gaps = 41/393 (10%)
Query: 92  TALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRA 151
           T L++A   G   +V  L+  GA+ N  + K  TPLH+A   G+  + K+LL  KA V A
Sbjct: 16  TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 75
Query: 152 KCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSV 211
           K     TP L  +A +      TN ++ +L+EN AN          +PLH A  + ++  
Sbjct: 76  KAKDDQTP-LHCAARIGH----TN-MVKLLLENNANPNLAT-TAGHTPLHIAAREGHVET 128
Query: 212 VELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKA 271
           V  L++ +A    + K    P L  A +   V++ E  L       +     L   LH A
Sbjct: 129 VLALLEKEASQACMTKKGFTP-LHVAAKYGKVRVAELLLERDAHPNAAGKNGLTP-LHVA 186
Query: 272 CHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQ-QDSINVNLPI 330
            H  NL IV++L+ R    ++       P+  A    +    VA  LLQ   S N     
Sbjct: 187 VHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIA--AKQNQVEVARSLLQYGGSANA---- 240
Query: 331 KRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCD 390
                  ++V  +    + +Q   +   +++  ++ +  N N      +TPL   A+   
Sbjct: 241 -------ESVQGVTPLHLAAQ---EGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGH 290
Query: 391 LQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGAD 450
           +  A  LI+ G  V+ T T+  +                +   H  NI++VK LL H AD
Sbjct: 291 VPVADVLIKHGVMVDAT-TRMGYTP-------------LHVASHYGNIKLVKFLLQHQAD 336
Query: 451 VNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGA 483
           VN    K    PL  A Q G   IV  L   GA
Sbjct: 337 VN-AKTKLGYSPLHQAAQQGHTDIVTLLLKNGA 368

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 107/473 (22%), Positives = 192/473 (40%), Gaps = 113/473 (23%)
Query: 259 ISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYL 318
           +S+  + + LH A   G+ ++ + L++ K  +NA+ +    P+  A  +G  HT++ + L
Sbjct: 42  VSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIG--HTNMVKLL 99
Query: 319 LQQDSINVNLPIKRPNLLL---------DTVMSLKDPKVMSQTQIKRLD----------- 358
           L+ ++ N NL     +  L         +TV++L + K  SQ  + +             
Sbjct: 100 LENNA-NPNLATTAGHTPLHIAAREGHVETVLALLE-KEASQACMTKKGFTPLHVAAKYG 157
Query: 359 --QIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISD 416
             ++ + +++R  + NA G + +TPL  A  H +L   K L+ +G +             
Sbjct: 158 KVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGS------------- 204
Query: 417 ARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVK 476
             S  +   + L  A K +N +E+ + LL +G   N  S +    PL +A Q G  ++V 
Sbjct: 205 PHSPAWNGYTPLHIAAK-QNQVEVARSLLQYGGSANAESVQ-GVTPLHLAAQEGHAEMVA 262
Query: 477 ELQNYGAQIDKENYLKNKEAARIAHSTTELEERXXXXXXXXXXXXXXXXVRSNKYDEVKK 536
            L +  A  +    L NK      H                         +         
Sbjct: 263 LLLSKQANGN----LGNKSGLTPLH----------------------LVAQEGHVPVADV 296
Query: 537 NIEDGACVNVSSERRGSALIYVAWK-GYEEIVDLLLDNGADVNFKSATGFTALHMACRFH 595
            I+ G  V+ ++ R G   ++VA   G  ++V  LL + ADVN K+  G++ LH A +  
Sbjct: 297 LIKHGVMVDATT-RMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQ-Q 354
Query: 596 SNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRXXXXXXXXXXNLFASVTNPYDPN 655
            + +IV  LL +GA  + +    G TPL                                
Sbjct: 355 GHTDIVTLLLKNGASPN-EVSSDGTTPLA------------------------------- 382
Query: 656 VYHRIELMNSAKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYSFLERLEEVL 708
                     AK+LG + V +++KVV +    + + V+ K   SF E ++E+L
Sbjct: 383 ---------IAKRLGYISVTDVLKVVTDET--SFVLVSDKHRMSFPETVDEIL 424

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 108/248 (43%), Gaps = 42/248 (16%)
Query: 59  LLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVND 118
           ++C+  +  K+ E++  +           QD RTAL+ A   G  ++V  L+  G  VND
Sbjct: 9   MICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVND 68
Query: 119 RDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEII 178
           +D+ G++PLH+A   G   IVK LL K A V A      TP+   +      S + +EI 
Sbjct: 69  KDDAGWSPLHIAASAGRDEIVKALLVKGAHVNAVNQNGCTPLHYAA------SKNRHEIA 122
Query: 179 SMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAI 238
            ML+E GAN   K  + D + +H A  K NL +V +L+  KA TN               
Sbjct: 123 VMLLEGGANPDAKDHY-DATAMHRAAAKGNLKMVHILLFYKASTN--------------- 166
Query: 239 ESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFL 298
                               I D + N+ LH AC    ++  + LV +   I  +N+   
Sbjct: 167 --------------------IQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEK 206
Query: 299 PPMFFAIG 306
            P+  A G
Sbjct: 207 TPLQVAKG 214

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 70/157 (44%), Gaps = 7/157 (4%)
Query: 528 SNKYDEVKKNI-EDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           S K DE+K+ I  D +    + +   +AL +    G+ EIV+ LL  G  VN K   G++
Sbjct: 16  SGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWS 75
Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRXXXXXXXXXXNLFA 646
            LH+A      D IV+ LL  GA+ +  + + G TPL +A A KNR              
Sbjct: 76  PLHIAASA-GRDEIVKALLVKGAHVNAVN-QNGCTPLHYA-ASKNRHEIAVMLLEGGANP 132
Query: 647 SVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKN 683
              + YD    HR     +   L +VH+    K   N
Sbjct: 133 DAKDHYDATAMHRAA---AKGNLKMVHILLFYKASTN 166

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 108/248 (43%), Gaps = 42/248 (16%)
Query: 59  LLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVND 118
           ++C+  +  K+ E++  +           QD RTAL+ A   G  ++V  L+  G  VND
Sbjct: 9   MICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVND 68
Query: 119 RDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEII 178
           +D+ G++PLH+A   G   IVK LL K A V A      TP+   +      S + +EI 
Sbjct: 69  KDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAA------SKNRHEIA 122
Query: 179 SMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAI 238
            ML+E GAN   K  + D + +H A  K NL +V +L+  KA TN               
Sbjct: 123 VMLLEGGANPDAKDHY-DATAMHRAAAKGNLKMVHILLFYKASTN--------------- 166
Query: 239 ESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFL 298
                               I D + N+ LH AC    ++  + LV +   I  +N+   
Sbjct: 167 --------------------IQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEK 206
Query: 299 PPMFFAIG 306
            P+  A G
Sbjct: 207 TPLQVAKG 214

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 70/157 (44%), Gaps = 7/157 (4%)
Query: 528 SNKYDEVKKNI-EDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           S K DE+K+ I  D +    + +   +AL +    G+ EIV+ LL  G  VN K   G++
Sbjct: 16  SGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWS 75
Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRXXXXXXXXXXNLFA 646
            LH+A      D IV+ LL  GA+ +  + + G TPL +A A KNR              
Sbjct: 76  PLHIAASA-GXDEIVKALLVKGAHVNAVN-QNGCTPLHYA-ASKNRHEIAVMLLEGGANP 132
Query: 647 SVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKN 683
              + YD    HR     +   L +VH+    K   N
Sbjct: 133 DAKDHYDATAMHRAA---AKGNLKMVHILLFYKASTN 166

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 85/159 (53%), Gaps = 9/159 (5%)
Query: 59  LLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVND 118
           L+ +A   NK R V+ L+  G  DVN    DGRT L+ A   G  ++V LLI  GA+VN 
Sbjct: 8   LIEAAENGNKDR-VKDLIENG-ADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNA 65
Query: 119 RDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEII 178
           +D  G TPLH A   G+K +VK L+SK ADV AK S   TP+   + N  +      E++
Sbjct: 66  KDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHK------EVV 119
Query: 179 SMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIK 217
            +LI  GA+V         +PL  A    N  VV+LL K
Sbjct: 120 KLLISKGADVN-TSDSDGRTPLDLAREHGNEEVVKLLEK 157

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 75/157 (47%), Gaps = 9/157 (5%)
Query: 130 ACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVR 189
           A   GNK+ VK L+   ADV A  S   TP+   + N  +      E++ +LI  GA+V 
Sbjct: 11  AAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHK------EVVKLLISKGADVN 64
Query: 190 EKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAF 249
            K      +PLH A    +  VV+LLI   AD N      + PL   A   N  K V   
Sbjct: 65  AK-DSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAA--ENGHKEVVKL 121
Query: 250 LNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKR 286
           L SK  DV+ SD D  + L  A   GN ++V++L K+
Sbjct: 122 LISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQ 158

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 532 DEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMA 591
           D VK  IE+GA VN S     + L + A  G++E+V LL+  GADVN K + G T LH A
Sbjct: 18  DRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHA 77
Query: 592 CRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHA 626
              + +  +V+ L+  GA  + KD   G+TPL HA
Sbjct: 78  AE-NGHKEVVKLLISKGADVNAKD-SDGRTPLHHA 110

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 86.3 bits (212), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 85/159 (53%), Gaps = 9/159 (5%)
Query: 59  LLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVND 118
           L+ +A   NK R V+ L+  G  DVN    DGRT L+ A  +G  ++V LLI  GA+VN 
Sbjct: 8   LIEAAENGNKDR-VKDLIENG-ADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNA 65
Query: 119 RDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEII 178
           +D  G TPLH A   G+K IVK L+SK ADV AK S   TP+   +    +      EI+
Sbjct: 66  KDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHK------EIV 119
Query: 179 SMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIK 217
            +LI  GA+V         +PL  A    N  +V+LL K
Sbjct: 120 KLLISKGADVN-TSDSDGRTPLDLAREHGNEEIVKLLEK 157

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/128 (38%), Positives = 74/128 (57%), Gaps = 15/128 (11%)
Query: 359 QIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDAR 418
           +I+K +I +  ++NA+  D  TPL +AAK    +  K LI KGA+VN           A+
Sbjct: 51  EIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGADVN-----------AK 99
Query: 419 SSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKEL 478
            SD   R+ L YA K + + E+VKLL+  GADVN TS+   + PL +A + G+ +IVK L
Sbjct: 100 DSD--GRTPLHYAAK-EGHKEIVKLLISKGADVN-TSDSDGRTPLDLAREHGNEEIVKLL 155
Query: 479 QNYGAQID 486
           +  G  ++
Sbjct: 156 EKQGGWLE 163

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 532 DEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMA 591
           D VK  IE+GA VN S     + L Y A +G++EIV LL+  GADVN K + G T LH A
Sbjct: 18  DRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYA 77
Query: 592 CRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHA 626
            +   +  IV+ L+  GA  + KD   G+TPL +A
Sbjct: 78  AK-EGHKEIVKLLISKGADVNAKD-SDGRTPLHYA 110

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 86/163 (52%), Gaps = 17/163 (10%)
Query: 59  LLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVND 118
           L+ +A   NK R V+ LL  G  DVN    DG+T L++A   G  ++V LL+  GA+ N 
Sbjct: 8   LIEAAENGNKDR-VKDLLENG-ADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNA 65
Query: 119 RDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEII 178
           +D  G TPLHLA   G+K +VK LLS+ AD  AK S   TP+   + N  +      E++
Sbjct: 66  KDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHK------EVV 119
Query: 179 SMLIENGANVREKMPFTDFS----PLHFAVVKKNLSVVELLIK 217
            +L+  GA+     P T  S    PL  A    N  VV+LL K
Sbjct: 120 KLLLSQGAD-----PNTSDSDGRTPLDLAREHGNEEVVKLLEK 157

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 532 DEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMA 591
           D VK  +E+GA VN S     + L   A  G++E+V LLL  GAD N K + G T LH+A
Sbjct: 18  DRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLA 77
Query: 592 CRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPL 623
              + +  +V+ LL  GA  + KD   GKTPL
Sbjct: 78  AE-NGHKEVVKLLLSQGADPNAKD-SDGKTPL 107

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/163 (39%), Positives = 83/163 (50%), Gaps = 17/163 (10%)
Query: 59  LLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVND 118
           L+ +A   NK R V+ LL  G  D N    DGRT L+ A   G  ++V LL+  GA+ N 
Sbjct: 8   LIEAAENGNKDR-VKDLLENG-ADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNA 65
Query: 119 RDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEII 178
           +D  G TPLH A   G+K IVK LLSK AD  AK S   TP+   + N  +      EI+
Sbjct: 66  KDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHK------EIV 119
Query: 179 SMLIENGANVREKMPFTDFS----PLHFAVVKKNLSVVELLIK 217
            +L+  GA+     P T  S    PL  A    N  +V+LL K
Sbjct: 120 KLLLSKGAD-----PNTSDSDGRTPLDLAREHGNEEIVKLLEK 157

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 94  LYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKC 153
           L  A   G    V  L+ +GA+ N  D  G TPLH A   G+K IVK LLSK AD  AK 
Sbjct: 8   LIEAAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKD 67
Query: 154 SMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVE 213
           S   TP+   + N  +      EI+ +L+  GA+   K      +PLH+A    +  +V+
Sbjct: 68  SDGRTPLHYAAENGHK------EIVKLLLSKGADPNAKD-SDGRTPLHYAAENGHKEIVK 120
Query: 214 LLIKCKADTNLIVKVNQEPLLFFAIESNS--VKIVE 247
           LL+   AD N      + PL       N   VK++E
Sbjct: 121 LLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLE 156

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 130 ACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVR 189
           A   GNK+ VK LL   AD  A  S   TP+   + N  +      EI+ +L+  GA+  
Sbjct: 11  AAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHK------EIVKLLLSKGADPN 64
Query: 190 EKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAF 249
            K      +PLH+A    +  +V+LL+   AD N      + P L +A E+   +IV+  
Sbjct: 65  AKD-SDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTP-LHYAAENGHKEIVKLL 122
Query: 250 LNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKR 286
           L SK  D + SD D  + L  A   GN +IV++L K+
Sbjct: 123 L-SKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQ 158

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 532 DEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMA 591
           D VK  +E+GA  N S     + L Y A  G++EIV LLL  GAD N K + G T LH A
Sbjct: 18  DRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYA 77
Query: 592 CRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHA 626
              + +  IV+ LL  GA  + KD   G+TPL +A
Sbjct: 78  AE-NGHKEIVKLLLSKGADPNAKD-SDGRTPLHYA 110

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 71/118 (60%), Gaps = 7/118 (5%)
Query: 106 VTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSA 165
           V +L+ +GA+VN  D  G+TPLHLA Y G+  IV+ LL   ADV A  ++  TP L ++A
Sbjct: 30  VRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLGSTP-LHLAA 88
Query: 166 NMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTN 223
           +         EI+ +L++NGA+V  K      +PLH A  + +L +VE+L+K  AD N
Sbjct: 89  HFGH-----LEIVEVLLKNGADVNAK-DDNGITPLHLAANRGHLEIVEVLLKYGADVN 140

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 67/119 (56%), Gaps = 3/119 (2%)
Query: 178 ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFA 237
           + +L+ NGA+V        ++PLH A    +L +VE+L+K  AD N    +   PL   A
Sbjct: 30  VRILMANGADVN-AADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLGSTPL-HLA 87
Query: 238 IESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
                ++IVE  L +   DV+  D +  + LH A + G+L+IV++L+K   D+NAQ+++
Sbjct: 88  AHFGHLEIVEVLLKN-GADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVNAQDKF 145

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           R+ + DEV+  + +GA VN +     + L   A+ G+ EIV++LL NGADVN     G T
Sbjct: 23  RAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLGST 82
Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPL 623
            LH+A  F  +  IV  LL +GA  + KD   G TPL
Sbjct: 83  PLHLAAHF-GHLEIVEVLLKNGADVNAKD-DNGITPL 117

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 83/147 (56%), Gaps = 8/147 (5%)
Query: 71  EVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLA 130
           EV  L++ G  DVN K +DG T L++A  +G  ++V +L+  GA+VN +D+ GYTPLHLA
Sbjct: 17  EVRILMANG-ADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLA 75
Query: 131 CYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVRE 190
              G+  IV+ LL   ADV AK     TP L ++A          EI+ +L++ GA+V  
Sbjct: 76  AREGHLEIVEVLLKAGADVNAKDKDGYTP-LHLAAREGH-----LEIVEVLLKAGADVNA 129
Query: 191 KMPFTDFSPLHFAVVKKNLSVVELLIK 217
           +  F   +P   A+   N  + E+L K
Sbjct: 130 QDKFGK-TPFDLAIDNGNEDIAEVLQK 155

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 178 ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFA 237
           + +L+ NGA+V  K     ++PLH A  + +L +VE+L+K  AD N   K    PL   A
Sbjct: 18  VRILMANGADVNAKDK-DGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAA 76
Query: 238 IESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYF 297
            E + ++IVE  L +   DV+  D D  + LH A   G+L+IV++L+K   D+NAQ+++ 
Sbjct: 77  REGH-LEIVEVLLKA-GADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFG 134
Query: 298 LPPMFFAIGMGRKHTHVAEYL 318
             P   AI  G +   +AE L
Sbjct: 135 KTPFDLAIDNGNE--DIAEVL 153

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/100 (42%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           R+ + DEV+  + +GA VN   +   + L   A +G+ EIV++LL  GADVN K   G+T
Sbjct: 11  RAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYT 70
Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHA 626
            LH+A R   +  IV  LL  GA  + KD K G TPL  A
Sbjct: 71  PLHLAAR-EGHLEIVEVLLKAGADVNAKD-KDGYTPLHLA 108

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query: 106 VTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPI-LAVS 164
           V +L+ +GA+VN +D+ GYTPLHLA   G+  IV+ LL   ADV AK     TP+ LA  
Sbjct: 30  VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAR 89
Query: 165 ANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTN 223
                      EI+ +L++ GA+V  K     ++PLH A  + +L +VE+L+K  AD N
Sbjct: 90  EGHL-------EIVEVLLKAGADVNAK-DKDGYTPLHLAAREGHLEIVEVLLKAGADVN 140

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 3/119 (2%)
Query: 178 ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFA 237
           + +L+ NGA+V  K     ++PLH A  + +L +VE+L+K  AD N   K    PL   A
Sbjct: 30  VRILMANGADVNAK-DKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAA 88
Query: 238 IESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
            E + ++IVE  L +   DV+  D D  + LH A   G+L+IV++L+K   D+NAQ+++
Sbjct: 89  REGH-LEIVEVLLKA-GADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKF 145

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 526 VRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGF 585
            R+ + DEV+  + +GA VN   +   + L   A +G+ EIV++LL  GADVN K   G+
Sbjct: 22  ARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGY 81
Query: 586 TALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPL 623
           T LH+A R   +  IV  LL  GA  + KD K G TPL
Sbjct: 82  TPLHLAAR-EGHLEIVEVLLKAGADVNAKD-KDGYTPL 117

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 84/147 (57%), Gaps = 8/147 (5%)
Query: 71  EVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLA 130
           EV  L++ G  DVN K +DG T L++A  +G  ++V +L+  GA+VN +D+ GYTPLHLA
Sbjct: 17  EVRILMANG-ADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLA 75
Query: 131 CYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVRE 190
              G+  IV+ LL   ADV AK     TP L ++A          EI+ +L++ GA+V  
Sbjct: 76  AREGHLEIVEVLLKAGADVNAKDKDGYTP-LHLAAREGH-----LEIVEVLLKAGADVNA 129
Query: 191 KMPFTDFSPLHFAVVKKNLSVVELLIK 217
           +  F   +P   A+ + +  + E+L K
Sbjct: 130 QDKFGK-TPFDLAIREGHEDIAEVLQK 155

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 178 ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFA 237
           + +L+ NGA+V  K     ++PLH A  + +L +VE+L+K  AD N   K    PL   A
Sbjct: 18  VRILMANGADVNAKDK-DGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAA 76
Query: 238 IESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYF 297
            E + ++IVE  L +   DV+  D D  + LH A   G+L+IV++L+K   D+NAQ+++ 
Sbjct: 77  REGH-LEIVEVLLKA-GADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFG 134
Query: 298 LPPMFFAIGMGRKHTHVAEYL 318
             P   AI  G  H  +AE L
Sbjct: 135 KTPFDLAIREG--HEDIAEVL 153

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/100 (42%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           R+ + DEV+  + +GA VN   +   + L   A +G+ EIV++LL  GADVN K   G+T
Sbjct: 11  RAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYT 70
Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHA 626
            LH+A R   +  IV  LL  GA  + KD K G TPL  A
Sbjct: 71  PLHLAAR-EGHLEIVEVLLKAGADVNAKD-KDGYTPLHLA 108

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 47/120 (39%), Positives = 69/120 (57%), Gaps = 11/120 (9%)
Query: 106 VTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTP--ILAV 163
           V +L+ +GA+VN  D+ G TPLHLA   G+  IV+ LL   ADV A   M  TP  + A+
Sbjct: 30  VRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMGDTPLHLAAL 89
Query: 164 SANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTN 223
             ++        EI+ +L++NGA+V     +  F+PLH A    +L +VE+L+K  AD N
Sbjct: 90  YGHL--------EIVEVLLKNGADVNATDTYG-FTPLHLAADAGHLEIVEVLLKYGADVN 140

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 178 ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFA 237
           + +L+ NGA+V  +   +  +PLH A +K +L +VE+L+K  AD N   K+   PL   A
Sbjct: 30  VRILMANGADVNAE-DDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMGDTPLHLAA 88
Query: 238 IESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
           +  + ++IVE  L +   DV+ +D    + LH A   G+L+IV++L+K   D+NAQ+++
Sbjct: 89  LYGH-LEIVEVLLKN-GADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVNAQDKF 145

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 526 VRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGF 585
            R+ + DEV+  + +GA VN   +   + L   A KG+ EIV++LL +GADVN     G 
Sbjct: 22  ARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMGD 81
Query: 586 TALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLK-HAEAG 629
           T LH+A   + +  IV  LL +GA  +  D   G TPL   A+AG
Sbjct: 82  TPLHLAA-LYGHLEIVEVLLKNGADVNATD-TYGFTPLHLAADAG 124

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 51/132 (38%), Positives = 74/132 (56%), Gaps = 7/132 (5%)
Query: 89  DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKAD 148
           +GRT L++A   G  ++V LL+  GA+VN +D+ G TPLHLA   G+  +VK LL   AD
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 149 VRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKN 208
           V AK     TP+   + N         E++ +L+E GA+V  K      +PLH A    +
Sbjct: 61  VNAKDKNGRTPLHLAARN------GHLEVVKLLLEAGADVNAKDK-NGRTPLHLAARNGH 113
Query: 209 LSVVELLIKCKA 220
           L VV+LL++  A
Sbjct: 114 LEVVKLLLEAGA 125

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           R+   + VK  +E GA VN   +   + L   A  G+ E+V LLL+ GADVN K   G T
Sbjct: 11  RNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRT 70
Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHA 626
            LH+A R + +  +V+ LL  GA  + KD K G+TPL  A
Sbjct: 71  PLHLAAR-NGHLEVVKLLLEAGADVNAKD-KNGRTPLHLA 108

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 44/118 (37%), Positives = 74/118 (62%), Gaps = 7/118 (5%)
Query: 106 VTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSA 165
           V +L+ +GA+VN  D++G TPLHLA ++G+  IV+ LL   ADV A+ +   TP+     
Sbjct: 30  VRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPL----- 84
Query: 166 NMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTN 223
           +++ D+    EI+ +L++ GA+V  +  +   +PLH A  + +L +VE+L+K  AD N
Sbjct: 85  HLAADNGHL-EIVEVLLKYGADVNAQDAY-GLTPLHLAADRGHLEIVEVLLKHGADVN 140

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           R+ + DEV+  + +GA VN   ++  + L   AW G+ EIV++LL +GADVN +   G+T
Sbjct: 23  RAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWT 82
Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHA 626
            LH+A   + +  IV  LL +GA  + +D   G TPL  A
Sbjct: 83  PLHLAAD-NGHLEIVEVLLKYGADVNAQDA-YGLTPLHLA 120

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 106 VTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSA 165
           V +L+ +GA+VN  D  GYTPLHLA   G+  IV+ LL   ADV A     +TP+   +A
Sbjct: 30  VRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTGITPLHLAAA 89
Query: 166 NMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTN 223
                 T   EI+ +L+++GA+V         +PLH A    +L +VE+L+K  AD N
Sbjct: 90  ------TGHLEIVEVLLKHGADVN-AYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVN 140

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 178 ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFA 237
           + +L+ NGA+V        ++PLH A    +L +VE+L+K  AD N        PL   A
Sbjct: 30  VRILMANGADVN-ATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTGITPL-HLA 87
Query: 238 IESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
             +  ++IVE  L     DV+  D D ++ LH A   G+L+IV++L+K   D+NAQ+++
Sbjct: 88  AATGHLEIVEVLL-KHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVNAQDKF 145

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 526 VRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGF 585
            R+ + DEV+  + +GA VN +     + L   A  G+ EIV++LL NGADVN    TG 
Sbjct: 22  ARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTGI 81
Query: 586 TALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPL 623
           T LH+A     +  IV  LL HGA  +  D   G TPL
Sbjct: 82  TPLHLAAAT-GHLEIVEVLLKHGADVNAYD-NDGHTPL 117

>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 53/147 (36%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Query: 71  EVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLA 130
           EV  L++ G  DVN     G T L++A   G  ++V +L+ HGA+V+  D  GYTPLHLA
Sbjct: 29  EVRILMANG-ADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLA 87
Query: 131 CYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVRE 190
            Y G+  IV+ LL   ADV A  S  +TP L ++A          EI+ +L+++GA+V  
Sbjct: 88  AYWGHLEIVEVLLKNGADVNAMDSDGMTP-LHLAAKWG-----YLEIVEVLLKHGADVNA 141
Query: 191 KMPFTDFSPLHFAVVKKNLSVVELLIK 217
           +  F   +    ++   N  + E+L K
Sbjct: 142 QDKFGK-TAFDISIDNGNEDLAEILQK 167

>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Query: 178 ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFA 237
           + +L+ NGA+V      T  +PLH A    +L +VE+L+K  AD +        PL   A
Sbjct: 30  VRILMANGADV-NAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPL-HLA 87
Query: 238 IESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
                ++IVE  L +   DV+  D D  + LH A   G L+IV++L+K   D+NAQ+++
Sbjct: 88  AYWGHLEIVEVLLKN-GADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKF 145

>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           R+ + DEV+  + +GA VN +     + L   A+ G+ EIV++LL +GADV+     G+T
Sbjct: 23  RAGQDDEVRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYT 82
Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHA 626
            LH+A  +  +  IV  LL +GA  +  D   G TPL  A
Sbjct: 83  PLHLAA-YWGHLEIVEVLLKNGADVNAMDSD-GMTPLHLA 120

>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin Repeat Domain Of Varp Length = 269

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 74/134 (55%), Gaps = 7/134 (5%)
Query: 83  VNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFL 142
           VN   QDG + L++A L G   ++ LL+ HGAN   R+     PLHLAC  G+  +VK L
Sbjct: 79  VNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCL 138
Query: 143 LSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHF 202
           L   A    K     TP++         S   +E++++L+++GA++       + + LH 
Sbjct: 139 LDSNAKPNKKDLSGNTPLIYAC------SGGHHELVALLLQHGASINASNNKGNTA-LHE 191
Query: 203 AVVKKNLSVVELLI 216
           AV++K++ VVELL+
Sbjct: 192 AVIEKHVFVVELLL 205

>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin Repeat Domain Of Varp Length = 269

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 541 GACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNI 600
           G  VNV+S+   S L   A  G  +++ LLL +GA+   ++A     LH+AC+   +  +
Sbjct: 76  GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQ-QGHFQV 134
Query: 601 VRKLLHHGAYYDMKDGKTGKTPLKHAEAG 629
           V+ LL   A  + KD  +G TPL +A +G
Sbjct: 135 VKCLLDSNAKPNKKD-LSGNTPLIYACSG 162

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 7/124 (5%)
Query: 71  EVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLA 130
           EV  L++ G  D N     GRT L+MA   G  ++V +L+ +GA+VN  D  G TPLHLA
Sbjct: 17  EVRILMANG-ADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLA 75
Query: 131 CYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVRE 190
             LG+  IV+ LL   ADV AK +  +TP L ++A          EI+ +L+++GA+V  
Sbjct: 76  ASLGHLEIVEVLLKYGADVNAKDATGITP-LYLAAYWGH-----LEIVEVLLKHGADVNA 129
Query: 191 KMPF 194
           +  F
Sbjct: 130 QDKF 133

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           R+ + DEV+  + +GA  N       + L   A  G+ EIV++LL NGADVN     G T
Sbjct: 11  RAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTT 70
Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPL 623
            LH+A     +  IV  LL +GA  + KD  TG TPL
Sbjct: 71  PLHLAASL-GHLEIVEVLLKYGADVNAKDA-TGITPL 105

>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/120 (38%), Positives = 67/120 (55%), Gaps = 11/120 (9%)
Query: 106 VTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTP--ILAV 163
           V +LI +GA+VN  D  G TPLHLA   G+  IV+ LL   ADV A      TP  + A+
Sbjct: 30  VRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYGFTPLHLAAM 89
Query: 164 SANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTN 223
           + ++        EI+ +L++ GA+V      T  +PLH A  + +L +VE+L+K  AD N
Sbjct: 90  TGHL--------EIVEVLLKYGADVN-AFDMTGSTPLHLAADEGHLEIVEVLLKYGADVN 140

>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 68/119 (57%), Gaps = 3/119 (2%)
Query: 178 ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFA 237
           + +LI NGA+V   +  T  +PLH A V  +L +VE+L+K  AD +        PL   A
Sbjct: 30  VRILIANGADVN-AVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYGFTPLHLAA 88
Query: 238 IESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
           + +  ++IVE  L     DV+  D   ++ LH A   G+L+IV++L+K   D+NAQ+++
Sbjct: 89  M-TGHLEIVEVLL-KYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVNAQDKF 145

>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           R+ + DEV+  I +GA VN       + L   A  G+ EIV++LL +GADV+     GFT
Sbjct: 23  RAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYGFT 82
Query: 587 ALHMACRFHSNDNIVRKLLHHGA---YYDMKDGKTGKTPL 623
            LH+A     +  IV  LL +GA    +DM    TG TPL
Sbjct: 83  PLHLAA-MTGHLEIVEVLLKYGADVNAFDM----TGSTPL 117

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 49/136 (36%), Positives = 71/136 (52%), Gaps = 7/136 (5%)
Query: 88  QDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKA 147
           QD    L  A   G    V +L+ +GA+VN  D+ G TPLHLA   G   IV+ LL   A
Sbjct: 4   QDLGKKLLEAAAAGQDDEVRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGA 63
Query: 148 DVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKK 207
           DV A  S  +TP+   + +         EI+ +L+++GA+V        ++PLH A +  
Sbjct: 64  DVNASDSAGITPLHLAAYD------GHLEIVEVLLKHGADV-NAYDRAGWTPLHLAALSG 116
Query: 208 NLSVVELLIKCKADTN 223
            L +VE+L+K  AD N
Sbjct: 117 QLEIVEVLLKHGADVN 132

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/95 (41%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 532 DEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMA 591
           DEV+  + +GA VN + +   + L   A  G  EIV++LL NGADVN   + G T LH+A
Sbjct: 20  DEVRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLA 79
Query: 592 CRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHA 626
             +  +  IV  LL HGA  +  D + G TPL  A
Sbjct: 80  A-YDGHLEIVEVLLKHGADVNAYD-RAGWTPLHLA 112

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 69/119 (57%), Gaps = 3/119 (2%)
Query: 178 ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFA 237
           + +L+ NGA+V  +  FT ++PLH A    +L +VE+L+K  AD N    +   PL   A
Sbjct: 30  VRILMANGADVNAR-DFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLGVTPL-HLA 87
Query: 238 IESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
                ++IVE  L +   DV+ SD    + LH A   G+L+IV++L+K   D+NAQ+++
Sbjct: 88  ARRGHLEIVEVLLKN-GADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVNAQDKF 145

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 526 VRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGF 585
            R+ + DEV+  + +GA VN       + L   A  G+ EIV++LL NGADVN K + G 
Sbjct: 22  ARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLGV 81
Query: 586 TALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPL 623
           T LH+A R   +  IV  LL +GA  +  D   G TPL
Sbjct: 82  TPLHLAAR-RGHLEIVEVLLKNGADVNASD-SHGFTPL 117

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 47/118 (39%), Positives = 69/118 (58%), Gaps = 7/118 (5%)
Query: 106 VTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSA 165
           V +L+ +GA+VN  D  G TPLHLA   G+  IV+ LL   ADV A   M  TP L ++A
Sbjct: 30  VRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMGSTP-LHLAA 88
Query: 166 NMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTN 223
            +        EI+ +L+++GA+V     + D +PLH A +  +L +VE+L+K  AD N
Sbjct: 89  LIGH-----LEIVEVLLKHGADVNAVDTWGD-TPLHLAAIMGHLEIVEVLLKHGADVN 140

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 3/119 (2%)
Query: 178 ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFA 237
           + +L+ NGA+V      +  +PLH A    +L +VE+L+K  AD N I  +   PL   A
Sbjct: 30  VRILMANGADV-NATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMGSTPLHLAA 88
Query: 238 IESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
           +  + ++IVE  L     DV+  D   ++ LH A  +G+L+IV++L+K   D+NAQ+++
Sbjct: 89  LIGH-LEIVEVLLK-HGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKF 145

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/100 (39%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           R+ + DEV+  + +GA VN +     + L   A  G+ EIV++LL +GADVN     G T
Sbjct: 23  RAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMGST 82
Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHA 626
            LH+A     +  IV  LL HGA  +  D   G TPL  A
Sbjct: 83  PLHLAALI-GHLEIVEVLLKHGADVNAVD-TWGDTPLHLA 120

>pdb|2RFM|A Chain A, Structure Of A Thermophilic Ankyrin Repeat Protein Length = 192

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/133 (37%), Positives = 69/133 (51%), Gaps = 3/133 (2%)
Query: 21  SYRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVE-LTLLCSAVWDNKIREVEFLLSTG 79
           SY    L    M   E+A    ++   +    K +E  T L  AV +N++   E LLS G
Sbjct: 33  SYNRTPLMVACMLGMENAIDKLVENF-DKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKG 91
Query: 80  DHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIV 139
             +VN K   G+T L  +I+ G  +M   L+ HGANVNDR+ +G TPL +A   G   IV
Sbjct: 92  -SNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIV 150
Query: 140 KFLLSKKADVRAK 152
           K LL   AD+ A+
Sbjct: 151 KKLLELGADISAR 163

>pdb|2RFM|A Chain A, Structure Of A Thermophilic Ankyrin Repeat Protein Length = 192

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 39/200 (19%)
Query: 310 KHTHVAEYLLQQDSINVNLPI--------KRPNLLLDTVMSLKDPKVMSQTQIKRLDQII 361
           K+  + E +  + SIN NL           R  L++  ++ +++           +D+++
Sbjct: 6   KNGEIVEKIKDEKSINQNLDFLRNYRDSYNRTPLMVACMLGMENA----------IDKLV 55
Query: 362 KRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSD 421
           +   D+ E+ + EG    T L++A K+  L  A+ L+ KG+NVN             + D
Sbjct: 56  ENF-DKLEDKDIEGS---TALIWAVKNNRLGIAEKLLSKGSNVN-------------TKD 98
Query: 422 FCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNY 481
           F  ++ L ++     + EM   LL HGA+VND  N   + PL VA + G  +IVK+L   
Sbjct: 99  FSGKTPLMWSIIFGYS-EMSYFLLEHGANVND-RNLEGETPLIVASKYGRSEIVKKLLEL 156
Query: 482 GAQIDKENY--LKNKEAARI 499
           GA I   +   L  + +ARI
Sbjct: 157 GADISARDLTGLTAEASARI 176

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           T L +A  +    EV+ LLS G  DVN + +DG T L++A   G  ++V LL+  GA+VN
Sbjct: 11  TPLHNAAKNGHAEEVKKLLSKGA-DVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN 69
Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKC 153
            R + G TP HLA   G+  IVK L +K ADV A+ 
Sbjct: 70  ARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 88  QDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKA 147
           +DG T L+ A   G  + V  L+  GA+VN R + G TPLHLA   G+  IVK LL+K A
Sbjct: 7   KDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGA 66
Query: 148 DVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANV 188
           DV A+     TP      N         EI+ +L   GA+V
Sbjct: 67  DVNARSKDGNTPEHLAKKNGHH------EIVKLLDAKGADV 101

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 59/114 (51%), Gaps = 15/114 (13%)
Query: 377 DMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKN 436
           D  TPL  AAK+   +  K L+ KGA+VN           ARS D    + L  A K+  
Sbjct: 8   DGNTPLHNAAKNGHAEEVKKLLSKGADVN-----------ARSKD--GNTPLHLAAKN-G 53
Query: 437 NIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENY 490
           + E+VKLLL  GADVN  S K    P  +A ++G  +IVK L   GA ++  ++
Sbjct: 54  HAEIVKLLLAKGADVNARS-KDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSW 106

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 38/68 (55%)
Query: 526 VRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGF 585
            ++   +EVKK +  GA VN  S+   + L   A  G+ EIV LLL  GADVN +S  G 
Sbjct: 17  AKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGN 76
Query: 586 TALHMACR 593
           T  H+A +
Sbjct: 77  TPEHLAKK 84

>pdb|2DZN|A Chain A, Crystal Structure Analysis Of Yeast Nas6p Complexed With The Proteasome Subunit, Rpt3 Length = 228

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 60  LCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN-- 117
           L  A  +N+  +V+ LL +    + +K QDGR  L+ ++    +++ + L+    NVN  
Sbjct: 6   LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD 65
Query: 118 -DRDEKGYTPLHLACYLGNKNIVKFLLSK--KADVRAKCSMMVTPI-LAVSANMSEDSTD 173
              D+ G+TP H+AC +GN  +VK L  +  K D+    +  VT + LAV          
Sbjct: 66  DYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWF----- 120
Query: 174 TNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKC-KADTNLIVKVNQEP 232
             E+   LIENGA+VR K  F    PLH A    +L ++ELL    K+  N   K    P
Sbjct: 121 --EVSQFLIENGASVRIKDKFNQI-PLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTP 177
Query: 233 LLFFAIESN---SVKIVEAF 249
           L     E +   +V +VE +
Sbjct: 178 LFHALAEGHGDAAVLLVEKY 197

>pdb|1IXV|A Chain A, Crystal Structure Analysis Of Homolog Of Oncoprotein Gankyrin, An Interactor Of Rb And Cdk46 Length = 231

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 60  LCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN-- 117
           L  A  +N+  +V+ LL +    + +K QDGR  L+ ++    +++ + L+    NVN  
Sbjct: 6   LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD 65
Query: 118 -DRDEKGYTPLHLACYLGNKNIVKFLLSK--KADVRAKCSMMVTPI-LAVSANMSEDSTD 173
              D+ G+TP H+AC +GN  +VK L  +  K D+    +  VT + LAV          
Sbjct: 66  DYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWF----- 120
Query: 174 TNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKC-KADTNLIVKVNQEP 232
             E+   LIENGA+VR K  F    PLH A    +L ++ELL    K+  N   K    P
Sbjct: 121 --EVSQFLIENGASVRIKDKFNQI-PLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTP 177
Query: 233 LLFFAIESN---SVKIVEAF 249
           L     E +   +V +VE +
Sbjct: 178 LFHALAEGHGDAAVLLVEKY 197

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 178 ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFA 237
           + +L+ NGA+V  +   + ++PLH A    +L +VE+L+K  AD N +      PL   A
Sbjct: 30  VRILMANGADVNAE-DASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAA 88
Query: 238 IESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
           +  + ++IVE  L +   DV+ +D + ++ LH A   G+L+IV++L+K   D+NAQ+++
Sbjct: 89  LFGH-LEIVEVLLKN-GADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKF 145

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           R+ + DEV+  + +GA VN       + L   A+ G+ EIV++LL NGADVN     G T
Sbjct: 23  RAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMT 82
Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPL 623
            L +A  F  +  IV  LL +GA  +  D   G TPL
Sbjct: 83  PLRLAALF-GHLEIVEVLLKNGADVNAND-MEGHTPL 117

>pdb|1WG0|A Chain A, Structural Comparison Of Nas6p Protein Structures In Two Different Crystal Forms Length = 243

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 60  LCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN-- 117
           L  A  +N+  +V+ LL +    + +K QDGR  L+ ++    +++ + L+    NVN  
Sbjct: 6   LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD 65
Query: 118 -DRDEKGYTPLHLACYLGNKNIVKFLLSK--KADVRAKCSMMVTPI-LAVSANMSEDSTD 173
              D+ G+TP H+AC +GN  +VK L  +  K D+    +  VT + LAV          
Sbjct: 66  DYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWF----- 120
Query: 174 TNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKC-KADTNLIVKVNQEP 232
             E+   LIENGA+VR K  F    PLH A    +L ++ELL    K+  N   K    P
Sbjct: 121 --EVSQFLIENGASVRIKDKFNQI-PLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTP 177
Query: 233 LLFFAIESN---SVKIVEAF 249
           L     E +   +V +VE +
Sbjct: 178 LFHALAEGHGDAAVLLVEKY 197

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Query: 60  LCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDR 119
           L  A    +  EV  L++ G  DVN K + G T LY+A   G  ++V +L+ +GA+VN  
Sbjct: 18  LLEAARAGQDDEVRILMANG-ADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAV 76
Query: 120 DEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSED 170
           D  G+TPLHLA ++G+  I + LL   ADV A+     T       N +ED
Sbjct: 77  DAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNED 127

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 526 VRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGF 585
            R+ + DEV+  + +GA VN   E   + L      G+ EIV++LL NGADVN   A GF
Sbjct: 22  ARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGF 81
Query: 586 TALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPL 623
           T LH+A  F  +  I   LL HGA  + +D K GKT  
Sbjct: 82  TPLHLAA-FIGHLEIAEVLLKHGADVNAQD-KFGKTAF 117

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 101/246 (41%), Gaps = 58/246 (23%)
Query: 71  EVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLA 130
           EV  LL  G  D+N    DG TAL+ A +     MV  L+ +GAN+N  D +G+ PLH A
Sbjct: 55  EVLRLLERG-ADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAA 113
Query: 131 CYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEI--ISMLIENGANV 188
              G  +I ++L+S+ A V A  S   TP L ++   + +    NE+    + IE     
Sbjct: 114 ASCGYLDIAEYLISQGAHVGAVNSEGDTP-LDIAEEEAMEELLQNEVNRQGVDIEAARKE 172
Query: 189 REKMPFTDF-------------------SPLHFAVVKKNLSVVELLIKCKADTNLIVKVN 229
            E++   D                    + LH A  K    V++LLI+ +          
Sbjct: 173 EERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR---------- 222
Query: 230 QEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFD 289
                                    +DV+I D D  + LH A H G  +  ++LV+   D
Sbjct: 223 -------------------------YDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCD 257
Query: 290 INAQNR 295
           + A N+
Sbjct: 258 MEAVNK 263

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 552 GSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYY 611
           G+  +     G  E V  LL+ GAD+N+ +  G TALH AC    N ++V+ L+ +GA  
Sbjct: 41  GAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQAC-IDDNVDMVKFLVENGANI 99
Query: 612 DMKDGKTGKTPLKHAEA 628
           +  D + G  PL HA A
Sbjct: 100 NQPDNE-GWIPL-HAAA 114

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 79/147 (53%), Gaps = 8/147 (5%)
Query: 71  EVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLA 130
           EV  L++ G  DVN     G T L++A   G  ++V +L+ HGA+VN  D  G TPLHLA
Sbjct: 29  EVRILMANG-ADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXGSTPLHLA 87
Query: 131 CYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVRE 190
             +G+  IV+ LL   ADV A  +   TP L ++A M        EI+ +L+++GA+V  
Sbjct: 88  ALIGHLEIVEVLLKHGADVNAVDTWGDTP-LHLAAIMGH-----LEIVEVLLKHGADVNA 141
Query: 191 KMPFTDFSPLHFAVVKKNLSVVELLIK 217
           +  F   +    ++   N  + E+L K
Sbjct: 142 QDKFGK-TAFDISIDNGNEDLAEILQK 167

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 3/119 (2%)
Query: 178 ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFA 237
           + +L+ NGA+V      +  +PLH A    +L +VE+L+K  AD N I      PL   A
Sbjct: 30  VRILMANGADV-NATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXGSTPLHLAA 88
Query: 238 IESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
           +  + ++IVE  L     DV+  D   ++ LH A  +G+L+IV++L+K   D+NAQ+++
Sbjct: 89  LIGH-LEIVEVLLK-HGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKF 145

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/100 (39%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           R+ + DEV+  + +GA VN +     + L   A  G+ EIV++LL +GADVN     G T
Sbjct: 23  RAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXGST 82
Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHA 626
            LH+A     +  IV  LL HGA  +  D   G TPL  A
Sbjct: 83  PLHLAALI-GHLEIVEVLLKHGADVNAVD-TWGDTPLHLA 120

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 3/119 (2%)
Query: 178 ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFA 237
           + +L+ NGA+V  +  + D +PLH A    +L +VE+L+K  AD N +      PL   A
Sbjct: 30  VRILMANGADVNAEDTYGD-TPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPL-HLA 87
Query: 238 IESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
            +   ++IVE  L     DV+  D   ++ LH A   G+L+IV++L+K   D+NAQ+++
Sbjct: 88  AKRGHLEIVEVLL-KYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKF 145

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 69/132 (52%), Gaps = 15/132 (11%)
Query: 358 DQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDA 417
           D  ++ ++    ++NAE     TPL  AA+   L+  + L++ GA+VN            
Sbjct: 27  DDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVN------------ 74
Query: 418 RSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKE 477
            + DF   + L  A K + ++E+V++LL +GADVN   +     PL +A  +G  +IV+ 
Sbjct: 75  -ALDFSGSTPLHLAAK-RGHLEIVEVLLKYGADVN-ADDTIGSTPLHLAADTGHLEIVEV 131
Query: 478 LQNYGAQIDKEN 489
           L  YGA ++ ++
Sbjct: 132 LLKYGADVNAQD 143

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           R+ + DEV+  + +GA VN       + L   A  G+ EIV++LL NGADVN    +G T
Sbjct: 23  RAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGST 82
Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPL 623
            LH+A +   +  IV  LL +GA  +  D   G TPL
Sbjct: 83  PLHLAAK-RGHLEIVEVLLKYGADVNADD-TIGSTPL 117

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 70/119 (58%), Gaps = 3/119 (2%)
Query: 178 ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFA 237
           + +L+ NGA+V        ++PLH A    +L +VE+L+K  AD N    +   PL   A
Sbjct: 30  VRILMANGADVNAS-DHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPL-HLA 87
Query: 238 IESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
            +   +++VE  L +   DV+ +D +  + LH A ++G+L+IV++L+K   D+NAQ+++
Sbjct: 88  ADRGHLEVVEVLLKN-GADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKF 145

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           R+ + DEV+  + +GA VN S     + L   A+ G+ EIV++LL NGADVN   + G T
Sbjct: 23  RAGQDDEVRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVT 82
Query: 587 ALHMAC-RFHSNDNIVRKLLHHGAYYDMKDGKTGKTPL 623
            LH+A  R H    +V  LL +GA  +  D   G TPL
Sbjct: 83  PLHLAADRGHL--EVVEVLLKNGADVNAND-HNGFTPL 117

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 109/245 (44%), Gaps = 34/245 (13%)
Query: 82  DVNEKLQDGR--TALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIV 139
           +VN    DGR  T L++A      ++V LL+ HGA+V+ +D+ G  PLH AC  G+  + 
Sbjct: 48  NVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVT 107
Query: 140 KFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSP 199
           + LL   A V A      TP+   +      S +  E+ S+L+ +GA+            
Sbjct: 108 ELLLKHGACVNAMDLWQFTPLHEAA------SKNRVEVCSLLLSHGADPT---------- 151
Query: 200 LHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAF-LNSKNFDVS 258
               V     S V++    +    L  +     LL  A E++  K+ +   L   NF   
Sbjct: 152 ---LVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQP 208
Query: 259 ISDGDLNSLLHKACHVGNL-----QIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTH 313
            S     + LH  C V +L     Q+ ++L+++  ++N +N+ F+ P+  A    R H  
Sbjct: 209 QSH---ETALH--CAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAA--ERAHND 261
Query: 314 VAEYL 318
           V E L
Sbjct: 262 VMEVL 266

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 122/287 (42%), Gaps = 27/287 (9%)
Query: 224 LIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQML 283
           L  +  ++ LL  A   N  K++ A L   N +   SDG  ++ LH A     ++IVQ+L
Sbjct: 19  LTGEYKKDELLEAARSGNEEKLM-ALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLL 77
Query: 284 VKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSL 343
           ++   D++A+++  L P+  A   G  H  V E LL+  +  VN         +D     
Sbjct: 78  LQHGADVHAKDKGGLVPLHNACSYG--HYEVTELLLKHGAC-VN--------AMDLWQFT 126
Query: 344 KDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMI----TPLLFAAKHCDLQSAKYLIQ 399
              +  S+ +++    ++    D T  +N  G   +    TP L      + +    L+Q
Sbjct: 127 PLHEAASKNRVEVCSLLLSHGADPTL-VNCHGKSAVDMAPTPELRERLTYEFK-GHSLLQ 184
Query: 400 KGANVNLTETQKAF------ISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVND 453
                +L + +K            +S +     A+  A  H    ++ +LLL  GA+VN+
Sbjct: 185 AAREADLAKVKKTLALEIINFKQPQSHETALHCAV--ASLHPKRKQVAELLLRKGANVNE 242
Query: 454 TSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIA 500
             NK    PL VA +     +++ L  +GA+++  + L      R A
Sbjct: 243 -KNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAA 288

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 547 SSERRGSALIYVAWKGYEE--IVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKL 604
           +S+ R S  +++A  GY    IV LLL +GADV+ K   G   LH AC +  +  +   L
Sbjct: 53  ASDGRKSTPLHLA-AGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSY-GHYEVTELL 110
Query: 605 LHHGAYYDMKDGKTGKTPLKHAEAGKNR 632
           L HGA  +  D     TPL H  A KNR
Sbjct: 111 LKHGACVNAMD-LWQFTPL-HEAASKNR 136

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 72  VEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLAC 131
           VE LL  G  DVN     G T L++A   G  ++V +L+ HGA+VN +D +G+TPLHLA 
Sbjct: 63  VEVLLKYG-ADVNAWDNYGATPLHLAADNGHLEIVEVLLKHGADVNAKDYEGFTPLHLAA 121
Query: 132 YLGNKNIVKFLLSKKADVRAK 152
           Y G+  IV+ LL   ADV A+
Sbjct: 122 YDGHLEIVEVLLKYGADVNAQ 142

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/119 (33%), Positives = 67/119 (56%), Gaps = 3/119 (2%)
Query: 178 ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFA 237
           + +L+ NGA+V     +   +PLH A    +L +VE+L+K  AD N        PL   A
Sbjct: 30  VRILMANGADV-NATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPL-HLA 87
Query: 238 IESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
            ++  ++IVE  L     DV+  D +  + LH A + G+L+IV++L+K   D+NAQ+++
Sbjct: 88  ADNGHLEIVEVLLK-HGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKF 145

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/100 (40%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           R+ + DEV+  + +GA VN +     + L   A  G+ EIV++LL  GADVN     G T
Sbjct: 23  RAGQDDEVRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGAT 82
Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHA 626
            LH+A   + +  IV  LL HGA  + KD + G TPL  A
Sbjct: 83  PLHLAAD-NGHLEIVEVLLKHGADVNAKDYE-GFTPLHLA 120

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 6/98 (6%)
Query: 89  DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKAD 148
           +GRT L++A   G  ++V LL+  GA+VN +D+ G TPLHLA   G+  +VK LL   AD
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 149 VRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGA 186
           V AK     TP+   + N         E++ +L+E GA
Sbjct: 61  VNAKDKNGRTPLHLAARN------GHLEVVKLLLEAGA 92

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           R+   + VK  +E GA VN   +   + L   A  G+ E+V LLL+ GADVN K   G T
Sbjct: 11  RNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRT 70
Query: 587 ALHMACRFHSNDNIVRKLLHHGAY 610
            LH+A R + +  +V+ LL  GAY
Sbjct: 71  PLHLAAR-NGHLEVVKLLLEAGAY 93

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 71  EVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLA 130
           EV  L++ G  DVN     G T L++A  +G  ++V +L+ HGA+VN RD  G TPLHLA
Sbjct: 29  EVRILMANG-ADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWGRTPLHLA 87
Query: 131 CYLGNKNIVKFLLSKKADVRAK 152
             +G+  IV+ LL   ADV A+
Sbjct: 88  ATVGHLEIVEVLLEYGADVNAQ 109

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           R+ + DEV+  + +GA VN   +   + L   A +G+ EIV++LL +GADVN +   G T
Sbjct: 23  RAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWGRT 82
Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKT 621
            LH+A     +  IV  LL +GA  + +D K GKT
Sbjct: 83  PLHLAATV-GHLEIVEVLLEYGADVNAQD-KFGKT 115

>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph (3')-Iiia In Complex With The Inhibitor Ar_3a Length = 169

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
Query: 178 ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFA 237
           + +L+ NGA+V     F   +PLH  V   +L ++E+L+K  AD N   K    PL   A
Sbjct: 30  VRILMANGADVNANDWFG-ITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAA 88
Query: 238 IESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
              + ++IVE  L     DV+  D    + LH A   G+L+IV++L+K   D+NAQ+++
Sbjct: 89  YRGH-LEIVEVLL-KYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKF 145

>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph (3')-Iiia In Complex With The Inhibitor Ar_3a Length = 169

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           R+ + DEV+  + +GA VN +     + L  V   G+ EI+++LL   ADVN    +G+T
Sbjct: 23  RAGQDDEVRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWT 82
Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPL 623
            LH+A  +  +  IV  LL +GA  +  D   G TPL
Sbjct: 83  PLHLAA-YRGHLEIVEVLLKYGADVNAMD-YQGYTPL 117

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 60  LCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDR 119
           L  A    +  EV  L++ G  DVN   +DG T L++A   G  ++V +L+ +GA+VN  
Sbjct: 18  LLEAARAGQDDEVRILMANG-ADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAE 76
Query: 120 DEKGYTPLHLACYLGNKNIVKFLLSKKADVRAK 152
           D  G TPLHLA   G+  IV+ LL   ADV A+
Sbjct: 77  DNFGITPLHLAAIRGHLEIVEVLLKHGADVNAQ 109

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 64/115 (55%), Gaps = 11/115 (9%)
Query: 106 VTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTP--ILAV 163
           V +L+ +GA+VN  DE G TPLHLA  LG+  IV+ LL   ADV A+ +  +TP  + A+
Sbjct: 30  VRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAI 89
Query: 164 SANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKC 218
             ++        EI+ +L+++GA+V  +  F   +    ++   N  + E+L K 
Sbjct: 90  RGHL--------EIVEVLLKHGADVNAQDKFGK-TAFDISIDNGNEDLAEILQKL 135

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           R+ + DEV+  + +GA VN   E   + L   A  G+ EIV++LL  GADVN +   G T
Sbjct: 23  RAGQDDEVRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGIT 82
Query: 587 ALHMAC-RFHSNDNIVRKLLHHGAYYDMKDGKTGKT 621
            LH+A  R H    IV  LL HGA  + +D K GKT
Sbjct: 83  PLHLAAIRGHL--EIVEVLLKHGADVNAQD-KFGKT 115

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 60  LCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDR 119
           L  A    +  EV  L++ G  DVN   + G T L++A      ++V +L+ HGA+VN  
Sbjct: 18  LLEAARAGQDDEVRILMANG-ADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAH 76
Query: 120 DEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSED 170
           D  G TPLHLA   G+  IV+ LL   ADV A+     T       N +ED
Sbjct: 77  DNDGSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNED 127

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Query: 526 VRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWK-GYEEIVDLLLDNGADVNFKSATG 584
            R+ + DEV+  + +GA VN +++R+G+  +++A    + EIV++LL +GADVN     G
Sbjct: 22  ARAGQDDEVRILMANGADVN-ANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 585 FTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKT 621
            T LH+A  F  +  IV  LL HGA  + +D K GKT
Sbjct: 81  STPLHLAALF-GHLEIVEVLLKHGADVNAQD-KFGKT 115

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 71  EVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLA 130
           EV  L++ G  DVN     G T L++A  +G  ++V +L+ HGA+VN  D  G TPLHLA
Sbjct: 29  EVRILMANG-ADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWGRTPLHLA 87
Query: 131 CYLGNKNIVKFLLSKKADVRAK 152
             +G+  IV+ LL   ADV A+
Sbjct: 88  ATVGHLEIVEVLLEYGADVNAQ 109

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 7/112 (6%)
Query: 106 VTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSA 165
           V +L+ +GA+VN  D+ G TPLHLA   G+  IV+ LL   ADV A  S   TP L ++A
Sbjct: 30  VRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWGRTP-LHLAA 88
Query: 166 NMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIK 217
            +        EI+ +L+E GA+V  +  F   +    ++   N  + E+L K
Sbjct: 89  TVGH-----LEIVEVLLEYGADVNAQDKFGK-TAFDISIDNGNEDLAEILQK 134

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           R+ + DEV+  + +GA VN   +   + L   A +G+ EIV++LL +GADVN   + G T
Sbjct: 23  RAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWGRT 82
Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKT 621
            LH+A     +  IV  LL +GA  + +D K GKT
Sbjct: 83  PLHLAATV-GHLEIVEVLLEYGADVNAQD-KFGKT 115

>pdb|4G8K|A Chain A, Intact Sensor Domain Of Human Rnase L In The Inactive Signaling State Length = 337

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 114/282 (40%), Gaps = 55/282 (19%)
Query: 59  LLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVND 118
           LL  AV +  +  V+ LL  G +   ++ + G T L+ A+      +V LL+ HGA+   
Sbjct: 28  LLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVL 87
Query: 119 RDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEII 178
           R + G TP  LA   G+  ++K  LSK ADV  +C                         
Sbjct: 88  RKKNGATPFILAAIAGSVKLLKLFLSKGADVN-ECD------------------------ 122
Query: 179 SMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNL--IVKVNQEPL--- 233
                          F  F+    A V   +  ++ L K  A+ NL    K +QE L   
Sbjct: 123 ---------------FYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKG 167
Query: 234 ----LFFAIESNSVKIVEAFLNSKNFDVSISDG-DLNSLLHKACHVGNLQ---IVQMLVK 285
               L  A E   V++++  L+    DV+  D    N+L+H      +     I  +L+ 
Sbjct: 168 GATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLD 227
Query: 286 RKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVN 327
              D+N +      P+  A+   +KH  + + LL+Q+ I +N
Sbjct: 228 HGADVNVRGERGKTPLILAV--EKKHLGLVQRLLEQEHIEIN 267

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 71  EVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLA 130
           EV  L++ G  DVN     G T L++A  +G  ++V +L+ HGA+VN  D  G TPLHLA
Sbjct: 29  EVRILMANG-ADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWGRTPLHLA 87
Query: 131 CYLGNKNIVKFLLSKKADVRAK 152
             +G+  IV+ LL   ADV A+
Sbjct: 88  ATVGHLEIVEVLLEYGADVNAQ 109

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           R+ + DEV+  + +GA VN   +   + L   A +G+ EIV++LL +GADVN     G T
Sbjct: 23  RAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWGRT 82
Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKT 621
            LH+A     +  IV  LL +GA  + +D K GKT
Sbjct: 83  PLHLAATV-GHLEIVEVLLEYGADVNAQD-KFGKT 115

>pdb|1WDY|A Chain A, Crystal Structure Of Ribonuclease Length = 285

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 114/282 (40%), Gaps = 55/282 (19%)
Query: 59  LLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVND 118
           LL  AV +  +  V+ LL  G +   ++ + G T L+ A+      +V LL+ HGA+   
Sbjct: 8   LLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVL 67
Query: 119 RDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEII 178
           R + G TP  LA   G+  ++K  LSK ADV  +C                         
Sbjct: 68  RKKNGATPFLLAAIAGSVKLLKLFLSKGADVN-ECD------------------------ 102
Query: 179 SMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNL--IVKVNQEPL--- 233
                          F  F+    A V   +  ++ L K  A+ NL    K +QE L   
Sbjct: 103 ---------------FYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKG 147
Query: 234 ----LFFAIESNSVKIVEAFLNSKNFDVSISDG-DLNSLLHKACHVGNLQ---IVQMLVK 285
               L  A E   V++++  L+    DV+  D    N+L+H      +     I  +L+ 
Sbjct: 148 GATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLD 207
Query: 286 RKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVN 327
              D+N +      P+  A+   +KH  + + LL+Q+ I +N
Sbjct: 208 HGADVNVRGERGKTPLILAV--EKKHLGLVQRLLEQEHIEIN 247

>pdb|3EU9|A Chain A, The Ankyrin Repeat Domain Of Huntingtin Interacting Protein 14 Length = 240

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 86/174 (49%), Gaps = 19/174 (10%)
Query: 57  LTLLCSAVWDNKIREVEFLLSTG------DHDVNEKLQDGRTALYMAILQGLYKMVTLLI 110
           +TLL  A  +N+I  V++ +S G        D+N       T L+ A  QG   MV  L+
Sbjct: 43  VTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNS------TPLHWATRQGHLSMVVQLM 96
Query: 111 HHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPIL-AVSANMSE 169
            +GA+ +  D +G + +HLA   G+ +IV +L++K  DV       +TP++ A     S 
Sbjct: 97  KYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSV 156
Query: 170 DSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTN 223
           D T       +L+    +V     +   + LH+AV+  N +V+ LL++  A+ +
Sbjct: 157 DPT------RLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVD 204

>pdb|3EU9|A Chain A, The Ankyrin Repeat Domain Of Huntingtin Interacting Protein 14 Length = 240

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 101 GLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPI 160
           G+Y+    L+  G +V   D++  T LH A      ++VK+ +SK A V      + +  
Sbjct: 20  GIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTP 79
Query: 161 LAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKA 220
           L  +      S     ++  L++ GA+    +     S +H A    + S+V  LI    
Sbjct: 80  LHWATRQGHLS-----MVVQLMKYGAD-PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQ 133
Query: 221 DTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGD---LNSLLHKACHVGNL 277
           D +++ +    PL++ A  ++SV      L    F+VS++ GD    N+ LH A   GN 
Sbjct: 134 DVDMMDQNGMTPLMWAAYRTHSVDPTRLLL---TFNVSVNLGDKYHKNTALHWAVLAGNT 190
Query: 278 QIVQMLVKRKFDINAQN 294
            ++ +L++   +++AQN
Sbjct: 191 TVISLLLEAGANVDAQN 207

>pdb|1K1B|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Bcl-3: A Unique Member Of The Ikappab Protein Family Length = 241

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 110/225 (48%), Gaps = 16/225 (7%)
Query: 88  QDGRTALYMAILQG----LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLL 143
           +DG T L++A++QG    ++++V L    G  ++  +    TPLHLA      ++V+ L+
Sbjct: 7   EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLV 66
Query: 144 SKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISML--IENGANVREKMPFTDFSPLH 201
           +  A       M +      +A+++ +      + ++L     G    E   +   + LH
Sbjct: 67  TAGAS-----PMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALH 121
Query: 202 FAVVKKNLSVVELLIKCKADTNLI-VKVNQEPLLFFAIESNSVKIVEAFL-NSKNFDVSI 259
            AV  +    V+LL++  AD + + +K  + PL+  A+E+NS+ +V+  L +  N +  +
Sbjct: 122 VAVNTECQETVQLLLERGADIDAVDIKSGRSPLIH-AVENNSLSMVQLLLQHGANVNAQM 180
Query: 260 SDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFA 304
             G  +S LH A   G L +V+ LV+   D + +N +   P+  A
Sbjct: 181 YSG--SSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVA 223

>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/95 (42%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           R+ + DEV+    +GA VN +     + L   A  G+ EIV++LL NGADVN    TG T
Sbjct: 23  RAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTGRT 82
Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKT 621
            LH+A  +  +  IV  LL HGA  + +D K GKT
Sbjct: 83  PLHLAA-WADHLEIVEVLLKHGADVNAQD-KFGKT 115

>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From Lactococcal Phage Tp901-1 Length = 136

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 60  LCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDR 119
           L  A    +  EV  L++ G  DVN + + G T L++A +    ++V +L+ +GA+VN  
Sbjct: 18  LLEAARAGQDDEVRILMANG-ADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAI 76
Query: 120 DEKGYTPLHLACYLGNKNIVKFLLSKKADVRAK 152
           D  G TPLHL    G+  IV+ LL   ADV A+
Sbjct: 77  DAIGETPLHLVAMYGHLEIVEVLLKHGADVNAQ 109

>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From Lactococcal Phage Tp901-1 Length = 136

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           R+ + DEV+  + +GA VN   +   + L   A   + EIV++LL NGADVN   A G T
Sbjct: 23  RAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIGET 82
Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKT 621
            LH+   +  +  IV  LL HGA  + +D K GKT
Sbjct: 83  PLHLVAMY-GHLEIVEVLLKHGADVNAQD-KFGKT 115

>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human Mcl1 Length = 167

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/114 (35%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 47  INSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMV 106
           +N    +  + T L  A   N++  VE+LL  G  DV+ K + G   L+ A   G Y++ 
Sbjct: 35  VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHG-ADVHAKDKGGLVPLHNACSYGHYEVA 93
Query: 107 TLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPI 160
            LL+ HGA VN  D   +TPLH A   G   I K LL   AD   K     TP+
Sbjct: 94  ELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPL 147

>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human Mcl1 Length = 167

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 15/129 (11%)
Query: 380 TPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIE 439
           TPL FAA +  +   +YL+Q GA+V+             + D      L  AC +  + E
Sbjct: 46  TPLHFAAGYNRVSVVEYLLQHGADVH-------------AKDKGGLVPLHNACSY-GHYE 91
Query: 440 MVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARI 499
           + +LL+ HGA VN  ++  K  PL  A   G ++I K L  +GA   K+N   N     +
Sbjct: 92  VAELLVKHGAVVN-VADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLV 150
Query: 500 AHSTTELEE 508
               T++++
Sbjct: 151 KDGDTDIQD 159

>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human 3bp2 Length = 165

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/114 (35%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 47  INSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMV 106
           +N    +  + T L  A   N++  VE+LL  G  DV+ K + G   L+ A   G Y++ 
Sbjct: 33  VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHG-ADVHAKDKGGLVPLHNACSYGHYEVA 91
Query: 107 TLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPI 160
            LL+ HGA VN  D   +TPLH A   G   I K LL   AD   K     TP+
Sbjct: 92  ELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPL 145

>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human 3bp2 Length = 165

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 15/129 (11%)
Query: 380 TPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIE 439
           TPL FAA +  +   +YL+Q GA+V+             + D      L  AC +  + E
Sbjct: 44  TPLHFAAGYNRVSVVEYLLQHGADVH-------------AKDKGGLVPLHNACSY-GHYE 89
Query: 440 MVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARI 499
           + +LL+ HGA VN  ++  K  PL  A   G ++I K L  +GA   K+N   N     +
Sbjct: 90  VAELLVKHGAVVN-VADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLV 148
Query: 500 AHSTTELEE 508
               T++++
Sbjct: 149 KDGDTDIQD 157

>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo Form) Length = 175

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/114 (35%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 47  INSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMV 106
           +N    +  + T L  A   N++  VE+LL  G  DV+ K + G   L+ A   G Y++ 
Sbjct: 37  VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHG-ADVHAKDKGGLVPLHNACSYGHYEVA 95
Query: 107 TLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPI 160
            LL+ HGA VN  D   +TPLH A   G   I K LL   AD   K     TP+
Sbjct: 96  ELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPL 149

>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo Form) Length = 175

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 15/129 (11%)
Query: 380 TPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIE 439
           TPL FAA +  +   +YL+Q GA+V+             + D      L  AC +  + E
Sbjct: 48  TPLHFAAGYNRVSVVEYLLQHGADVH-------------AKDKGGLVPLHNACSY-GHYE 93
Query: 440 MVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARI 499
           + +LL+ HGA VN  ++  K  PL  A   G ++I K L  +GA   K+N   N     +
Sbjct: 94  VAELLVKHGAVVN-VADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLV 152
Query: 500 AHSTTELEE 508
               T++++
Sbjct: 153 KDGDTDIQD 161

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 10/173 (5%)
Query: 88  QDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSK-K 146
           +D RT L  A      + V  LI  GA V+ +D +G T LHLA   G+  +V++LLS  +
Sbjct: 42  EDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQ 101
Query: 147 ADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVK 206
            DV  +     TP++  +     D      ++ +L+  G+++  +    +   LH+A   
Sbjct: 102 MDVNCQDDGGWTPMIWATEYKHVD------LVKLLLSKGSDINIRDNEENIC-LHWAAFS 154
Query: 207 KNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSI 259
             + + E+L+  K D +  V ++ +  L  A   N    V  FL S++ DV++
Sbjct: 155 GCVDIAEILLAAKCDLH-AVNIHGDSPLHIAARENRYDCVVLFL-SRDSDVTL 205

>pdb|1AWC|B Chain B, Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 153

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 8/124 (6%)
Query: 71  EVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLA 130
           EV  L++ G     + L  G + L++A   G +    +L+  G + + R +   TPLH+A
Sbjct: 17  EVRILMANGAPFTTDWL--GTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMA 74
Query: 131 CYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVRE 190
              G+ NIV+ LL   ADV AK  + +T +   + +      +  E++ +LI+ GA+V  
Sbjct: 75  ASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEH------NHQEVVELLIKYGADVHT 128
Query: 191 KMPF 194
           +  F
Sbjct: 129 QSKF 132

>pdb|1AWC|B Chain B, Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 153

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 12/123 (9%)
Query: 178 ISMLIENGANVREKMPFT-DF---SPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPL 233
           + +L+ NGA      PFT D+   SPLH A    + S  E+L++     +   KV++ PL
Sbjct: 18  VRILMANGA------PFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPL 71
Query: 234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQ 293
              A E ++  IVE  L     DV+  D    + LH A    + ++V++L+K   D++ Q
Sbjct: 72  HMAASEGHA-NIVEVLLK-HGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQ 129
Query: 294 NRY 296
           +++
Sbjct: 130 SKF 132

>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs Box-containing Protein 9 (asb9) In Complex With Elonginb And Elonginc Length = 261

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 8/141 (5%)
Query: 83  VNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFL 142
           VN    D  + L+ A L G    V +L+ HGA VN      +TPL  AC  G+ + V  L
Sbjct: 29  VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLL 88
Query: 143 LSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHF 202
           L   A V+ + S + +PI   +           E ++ LI  G N+  K+     +PL+ 
Sbjct: 89  LQHGASVQPE-SDLASPIHEAA------RRGHVECVNSLIAYGGNIDHKISHLG-TPLYL 140
Query: 203 AVVKKNLSVVELLIKCKADTN 223
           A   +  + V+ L++  AD N
Sbjct: 141 ACENQQRACVKKLLESGADVN 161

>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs Box-containing Protein 9 (asb9) In Complex With Elonginb And Elonginc Length = 261

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 13/204 (6%)
Query: 92  TALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRA 151
           + ++ A + G    +  LI  G  VN       +PLH AC  G+ + VK LL   A V  
Sbjct: 5   SPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNG 64
Query: 152 KCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDF-SPLHFAVVKKNLS 210
             +   TP+     + S D       +++L+++GA+V+   P +D  SP+H A  + ++ 
Sbjct: 65  VTADWHTPLFNACVSGSWD------CVNLLLQHGASVQ---PESDLASPIHEAARRGHVE 115
Query: 211 VVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHK 270
            V  LI    + +  +     P L+ A E+     V+  L S   DV+   G  +S LH 
Sbjct: 116 CVNSLIAYGGNIDHKISHLGTP-LYLACENQQRACVKKLLES-GADVNQGKGQ-DSPLHA 172
Query: 271 ACHVGNLQIVQMLVKRKFDINAQN 294
                + ++  +L+    D  A+N
Sbjct: 173 VARTASEELACLLMDFGADTQAKN 196

>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs Box-containing Protein 9 (asb9) In Complex With Elonginb And Elonginc Length = 261

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 86/211 (40%), Gaps = 22/211 (10%)
Query: 380 TPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIE 439
           +P+  AA H    S + LI +G  VN+                   S L  AC    ++ 
Sbjct: 5   SPMHEAAIHGHQLSLRNLISQGWAVNIITADHV-------------SPLHEACL-GGHLS 50
Query: 440 MVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNK--EAA 497
            VK+LL HGA VN  +      PL  A  SG +  V  L  +GA +  E+ L +   EAA
Sbjct: 51  CVKILLKHGAQVNGVTAD-WHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAA 109
Query: 498 RIAH----STTELEERXXXXXXXXXXXXXXXXVRSNKYDEVKKNIEDGACVNVSSERRGS 553
           R  H    ++                        + +   VKK +E GA VN   + + S
Sbjct: 110 RRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN-QGKGQDS 168
Query: 554 ALIYVAWKGYEEIVDLLLDNGADVNFKSATG 584
            L  VA    EE+  LL+D GAD   K+A G
Sbjct: 169 PLHAVARTASEELACLLMDFGADTQAKNAEG 199

>pdb|4A63|B Chain B, Crystal Structure Of The P73-Aspp2 Complex At 2.6a Resolution Length = 239

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 89  DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKAD 148
           +G TAL+ A+  G  ++V  L+  G NVN  D  G+TPLH A    N  + KFL+   A 
Sbjct: 69  EGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAA 128
Query: 149 VRA 151
           V A
Sbjct: 129 VFA 131

>pdb|1YCS|B Chain B, P53-53bp2 Complex Length = 239

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 89  DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKAD 148
           +G TAL+ A+  G  ++V  L+  G NVN  D  G+TPLH A    N  + KFL+   A 
Sbjct: 69  EGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAA 128
Query: 149 VRA 151
           V A
Sbjct: 129 VFA 131

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 58/125 (46%), Gaps = 10/125 (8%)
Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           TLL  A     I  VE+LL  G  D N K   G T L+ A   G  K+V LL+ H A VN
Sbjct: 12  TLLHIASIKGDIPSVEYLLQNGS-DPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVN 70
Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEI 177
               +  +PLH A   G+ +IVK LLS  A   A     + P+         D TD   +
Sbjct: 71  TTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPV---------DYTDDESM 121
Query: 178 ISMLI 182
            S+L+
Sbjct: 122 KSLLL 126

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 15/104 (14%)
Query: 380 TPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIE 439
           T L  A+   D+ S +YL+Q G             SD    D    + L  AC H  +++
Sbjct: 12  TLLHIASIKGDIPSVEYLLQNG-------------SDPNVKDHAGWTPLHEACNH-GHLK 57
Query: 440 MVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGA 483
           +V+LLL H A VN T  +    PL  A ++G   IVK L +YGA
Sbjct: 58  VVELLLQHKALVNTTGYQ-NDSPLHDAAKNGHVDIVKLLLSYGA 100

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 548 SERRGSALIYVA-WKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLH 606
           +  RG  L+++A  KG    V+ LL NG+D N K   G+T LH AC  H +  +V  LL 
Sbjct: 6   TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACN-HGHLKVVELLLQ 64
Query: 607 HGAYYDMKDGKTGKTPLKHAEAGKN 631
           H A  +   G    +PL   +A KN
Sbjct: 65  HKALVNTT-GYQNDSPLH--DAAKN 86

>pdb|1NFI|E Chain E, I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/142 (27%), Positives = 61/142 (42%)
Query: 91  RTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVR 150
           +T L++A++    ++   L+  G +   RD +G TPLHLAC  G    V  L        
Sbjct: 43  QTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPH 102
Query: 151 AKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLS 210
               +  T     +            I+ +L+  GA+V  + P    + LH AV  +N  
Sbjct: 103 LHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPD 162
Query: 211 VVELLIKCKADTNLIVKVNQEP 232
           +V LL+KC AD N +      P
Sbjct: 163 LVSLLLKCGADVNRVTYQGYSP 184

>pdb|3F6Q|A Chain A, Crystal Structure Of Integrin-Linked Kinase Ankyrin Repeat Domain In Complex With Pinch1 Lim1 Domain Length = 179

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 72  VEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLAC 131
           V   L   ++D+N+    G + L+ A  +G   +V +LI  GA +N  +    TPLHLA 
Sbjct: 21  VRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAA 80
Query: 132 YLGNKNIVKFLLSKKADVRA 151
             G+++IV+ LL  KAD+ A
Sbjct: 81  SHGHRDIVQKLLQYKADINA 100

>pdb|3F6Q|A Chain A, Crystal Structure Of Integrin-Linked Kinase Ankyrin Repeat Domain In Complex With Pinch1 Lim1 Domain Length = 179

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 197 FSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFD 256
           FSPLH+A  +   +VVE+LI   A  N++ + +  P L  A       IV+  L  K  D
Sbjct: 40  FSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTP-LHLAASHGHRDIVQKLLQYK-AD 97
Query: 257 VSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPM 301
           ++  +   N  LH AC  G  Q+ + LV     ++  N+Y   P+
Sbjct: 98  INAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPV 142

>pdb|3D9H|A Chain A, Crystal Structure Of The Splice Variant Of Human Asb9 (Hasb9-2), An Ankyrin Repeat Protein Length = 285

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 13/204 (6%)
Query: 92  TALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRA 151
           + ++ A + G    +  LI  G  VN       +PLH AC  G+ + VK LL   A V  
Sbjct: 61  SPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNG 120
Query: 152 KCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDF-SPLHFAVVKKNLS 210
             +   TP+     + S D       +++L+++GA+V+   P +D  SP+H A  + ++ 
Sbjct: 121 VTADWHTPLFNACVSGSWD------CVNLLLQHGASVQ---PESDLASPIHEAARRGHVE 171
Query: 211 VVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHK 270
            V  LI    + +  +     P L+ A E+     V+  L S   DV+   G  +S LH 
Sbjct: 172 CVNSLIAYGGNIDHKISHLGTP-LYLACENQQRACVKKLLES-GADVNQGKGQ-DSPLHA 228
Query: 271 ACHVGNLQIVQMLVKRKFDINAQN 294
                + ++  +L+    D  A+N
Sbjct: 229 VVRTASEELACLLMDFGADTQAKN 252

>pdb|3D9H|A Chain A, Crystal Structure Of The Splice Variant Of Human Asb9 (Hasb9-2), An Ankyrin Repeat Protein Length = 285

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 85/211 (40%), Gaps = 22/211 (10%)
Query: 380 TPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIE 439
           +P+  AA H    S + LI +G  VN+                   S L  AC    ++ 
Sbjct: 61  SPMHEAAIHGHQLSLRNLISQGWAVNIITADHV-------------SPLHEACL-GGHLS 106
Query: 440 MVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNK--EAA 497
            VK+LL HGA VN  +      PL  A  SG +  V  L  +GA +  E+ L +   EAA
Sbjct: 107 CVKILLKHGAQVNGVTAD-WHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAA 165
Query: 498 RIAH----STTELEERXXXXXXXXXXXXXXXXVRSNKYDEVKKNIEDGACVNVSSERRGS 553
           R  H    ++                        + +   VKK +E GA VN   + + S
Sbjct: 166 RRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN-QGKGQDS 224
Query: 554 ALIYVAWKGYEEIVDLLLDNGADVNFKSATG 584
            L  V     EE+  LL+D GAD   K+A G
Sbjct: 225 PLHAVVRTASEELACLLMDFGADTQAKNAEG 255

>pdb|2KBX|A Chain A, Solution Structure Of Ilk-Pinch Complex Length = 171

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 72  VEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLAC 131
           V   L   ++D+N+    G + L+ A  +G   +V +LI  GA +N  +    TPLHLA 
Sbjct: 16  VRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAA 75
Query: 132 YLGNKNIVKFLLSKKADVRA 151
             G+++IV+ LL  KAD+ A
Sbjct: 76  SHGHRDIVQKLLQYKADINA 95

>pdb|2KBX|A Chain A, Solution Structure Of Ilk-Pinch Complex Length = 171

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Query: 178 ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFA 237
           + + ++N  N   +     FSPLH+A  +   +VVE+LI   A  N++ + +  P L  A
Sbjct: 16  VRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTP-LHLA 74
Query: 238 IESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYF 297
                  IV+  L  K  D++  +   N  LH AC  G  Q+ + LV     ++  N+Y 
Sbjct: 75  ASHGHRDIVQKLLQYK-ADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYG 133
Query: 298 LPPM 301
             P+
Sbjct: 134 EMPV 137

>pdb|1IKN|D Chain D, IkappabalphaNF-Kappab Complex Length = 236

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/142 (27%), Positives = 61/142 (42%)
Query: 91  RTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVR 150
           +T L++A++    ++   L+  G +   RD +G TPLHLAC  G    V  L        
Sbjct: 46  QTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPH 105
Query: 151 AKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLS 210
               +  T     +            I+ +L+  GA+V  + P    + LH AV  +N  
Sbjct: 106 LHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPD 165
Query: 211 VVELLIKCKADTNLIVKVNQEP 232
           +V LL+KC AD N +      P
Sbjct: 166 LVSLLLKCGADVNRVTYQGYSP 187

>pdb|3AAA|C Chain C, Crystal Structure Of Actin Capping Protein In Complex With V-1 Length = 123

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 63  AVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEK 122
           A+ +  + EV+  ++ G+ DVN  L+ GR  L+ A   G  +++  L+  GA++N  D+ 
Sbjct: 14  ALKNGDLDEVKDYVAKGE-DVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKH 72
Query: 123 GYTPLHLACYLGNKNIVKFLLSKKADVRAK 152
             TPL  A Y G+ + VK LLSK AD   K
Sbjct: 73  HITPLLSAVYEGHVSCVKLLLSKGADKTVK 102

>pdb|1OY3|D Chain D, Crystal Structure Of An IkbbetaNF-Kb P65 Homodimer Complex Length = 282

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 73/179 (40%), Gaps = 25/179 (13%)
Query: 90  GRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKK--- 146
           G+TAL++A + G    V  L   GA V   +  G+T LHLAC +        LL  +   
Sbjct: 45  GQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSH 104
Query: 147 ----ADVRAKCSMMVTP-----ILAVSANMS----EDSTDTNEIISMLIENGANVREKMP 193
               +D     S   TP       AV +  +    E+  D +  + +  EN         
Sbjct: 105 PRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAEN--------- 155
Query: 194 FTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNS 252
           +   +PLH AV+ K+  +V LL    AD N          L  A+E+ +  ++E  L +
Sbjct: 156 YDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKA 214

>pdb|1K3Z|D Chain D, X-Ray Crystal Structure Of The IkbbNF-Kb P65 Homodimer Complex Length = 282

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 73/179 (40%), Gaps = 25/179 (13%)
Query: 90  GRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKK--- 146
           G+TAL++A + G    V  L   GA V   +  G+T LHLAC +        LL  +   
Sbjct: 45  GQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSH 104
Query: 147 ----ADVRAKCSMMVTP-----ILAVSANMS----EDSTDTNEIISMLIENGANVREKMP 193
               +D     S   TP       AV +  +    E+  D +  + +  EN         
Sbjct: 105 PRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAEN--------- 155
Query: 194 FTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNS 252
           +   +PLH AV+ K+  +V LL    AD N          L  A+E+ +  ++E  L +
Sbjct: 156 YDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKA 214

>pdb|1MYO|A Chain A, Solution Structure Of Myotrophin, Nmr, 44 Structures Length = 118

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 63  AVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEK 122
           A+ +  + EV+  ++ G+ DVN  L+ GR  L+ A   G  +++  L+  GA++N  D+ 
Sbjct: 9   ALKNGDLDEVKDYVAKGE-DVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKH 67
Query: 123 GYTPLHLACYLGNKNIVKFLLSKKADVRAK 152
             TPL  A Y G+ + VK LLSK AD   K
Sbjct: 68  HITPLLSAVYEGHVSCVKLLLSKGADKTVK 97

>pdb|2XEN|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module Length = 91

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 41/77 (53%)
Query: 94  LYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKC 153
           L  A   G    V +L+ +GA+VN +D+ GYTPLHLA   G+  IV+ LL   ADV A+ 
Sbjct: 6   LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQD 65
Query: 154 SMMVTPILAVSANMSED 170
               T       N +ED
Sbjct: 66  KFGKTAFDISIDNGNED 82

>pdb|2XEN|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module Length = 91

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 552 GSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYY 611
           G  L+  A  G ++ V +L+ NGADVN K   G+T LH+A R   +  IV  LL  GA  
Sbjct: 3   GKKLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAR-EGHLEIVEVLLKAGADV 61
Query: 612 DMKDGKTGKTPL 623
           + +D K GKT  
Sbjct: 62  NAQD-KFGKTAF 72

>pdb|1OT8|A Chain A, Structure Of The Ankyrin Domain Of The Drosophila Notch Receptor Length = 239

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 7/174 (4%)
Query: 42  FLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQG 101
            L    +++S  +   T L +AV  + +   + LL     ++N ++ DG T L +A    
Sbjct: 70  LLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLA 129
Query: 102 LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPIL 161
           +  MV  LI   A++N  D  G T LH A  + N   V  LL   A+  A+     TP+ 
Sbjct: 130 IEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLF 189
Query: 162 AVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELL 215
             +   S +++        L++N AN RE     D  P   A  + +  +V LL
Sbjct: 190 LAAREGSYEAS------KALLDNFAN-REITDHMDRLPRDVASERLHHDIVRLL 236

>pdb|1OT8|A Chain A, Structure Of The Ankyrin Domain Of The Drosophila Notch Receptor Length = 239

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 17/120 (14%)
Query: 359 QIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDAR 418
           QI+ R  +R  N+NA   D  TPL+ AA+       + LI   A++N             
Sbjct: 101 QILLR--NRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADIN------------- 145
Query: 419 SSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKEL 478
           ++D   ++AL +A    NN E V +LL+H A+  D  +   + PL +A + G ++  K L
Sbjct: 146 AADNSGKTALHWAAA-VNNTEAVNILLMHHAN-RDAQDDKDETPLFLAAREGSYEASKAL 203

>pdb|3T9K|A Chain A, Crystal Structure Of Acap1 C-portion Mutant S554d Fused With Integrin Beta1 Peptide Length = 390

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           T L  A   N +   EFLL  G  +VN+    GR  L+ A + G   +  L +  GA++ 
Sbjct: 237 TPLIQATAANSLLACEFLLQNGA-NVNQADSAGRGPLHHATILGHTGLACLFLKRGADLG 295
Query: 118 DRDEKGYTPLHLACYLGNKNIVKFL 142
            RD +G  PL +A    N +IV  L
Sbjct: 296 ARDSEGRDPLTIAMETANADIVTLL 320

>pdb|4F1P|A Chain A, Crystal Structure Of Mutant S554d For Arfgap And Ank Repeat Domain Of Acap1 Length = 368

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           T L  A   N +   EFLL  G  +VN+    GR  L+ A + G   +  L +  GA++ 
Sbjct: 237 TPLIQATAANSLLACEFLLQNG-ANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLG 295
Query: 118 DRDEKGYTPLHLACYLGNKNIVKFL 142
            RD +G  PL +A    N +IV  L
Sbjct: 296 ARDSEGRDPLTIAMETANADIVTLL 320

>pdb|3JUE|A Chain A, Crystal Structure Of Arfgap And Ank Repeat Domain Of Acap1 Length = 368

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           T L  A   N +   EFLL  G  +VN+    GR  L+ A + G   +  L +  GA++ 
Sbjct: 237 TPLIQATAANSLLACEFLLQNGA-NVNQADSAGRGPLHHATILGHTGLACLFLKRGADLG 295
Query: 118 DRDEKGYTPLHLACYLGNKNIVKFL 142
            RD +G  PL +A    N +IV  L
Sbjct: 296 ARDSEGRDPLTIAMETANADIVTLL 320

>pdb|3V2O|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 183

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 21/153 (13%)
Query: 332 RPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTEN-INAEGDDMITPLLFAAKHCD 390
           R NL      SL   ++ +Q ++  L   I++     EN IN   ++  TPL++AA H  
Sbjct: 10  RENLYFQGANSLSVHQLAAQGEMLYLATRIEQ-----ENVINHTDEEGFTPLMWAAAHGQ 64
Query: 391 LQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGAD 450
           +   ++L+Q GA+  L       +   R       SAL  AC  K   ++VK+LL  G D
Sbjct: 65  IAVVEFLLQNGADPQL-------LGKGR------ESALSLACS-KGYTDIVKMLLDCGVD 110
Query: 451 VNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGA 483
           VN+  +     PL  A+     + VK L   GA
Sbjct: 111 VNEY-DWNGGTPLLYAVHGNHVKCVKMLLESGA 142

>pdb|2VGE|A Chain A, Crystal Structure Of The C-Terminal Region Of Human Iaspp Length = 229

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/71 (38%), Positives = 38/71 (53%)
Query: 81  HDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVK 140
           +D ++  ++G TAL+ AI    Y +V  LI  GANVN  D  G+TPLH A    +  I  
Sbjct: 45  NDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICM 104
Query: 141 FLLSKKADVRA 151
            L+   A + A
Sbjct: 105 ALVQHGAAIFA 115

>pdb|3UXG|A Chain A, Crystal Structure Of Rfxank Length = 172

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 3/136 (2%)
Query: 182 IENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESN 241
           +  G N+  K     F+PL +A     +  V  L++  AD +++ K  +E  L  A    
Sbjct: 22  LRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAK-ERESALSLASTGG 80
Query: 242 SVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPM 301
              IV   L  ++ D++I D +  + L  A H  +++ V+ L+ R  D+  +      PM
Sbjct: 81  YTDIV-GLLLERDVDINIYDWNGGTPLLYAVHGNHVKCVEALLARGADLTTEADSGYTPM 139
Query: 302 FFAIGMG-RKHTHVAE 316
             A+ +G RK   V E
Sbjct: 140 DLAVALGYRKVQQVIE 155

>pdb|4HBD|A Chain A, Crystal Structure Of Kank2 Ankyrin Repeats Length = 276

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Query: 48  NSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKL-QDGRTALYMAILQGLYKMV 106
           N +    + LT L +    + I  V  L   G+  +N K  Q G+TAL +A+  G   +V
Sbjct: 142 NRAGYSPIMLTALATLKTQDDIETVLQLFRLGN--INAKASQAGQTALMLAVSHGRVDVV 199
Query: 107 TLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSAN 166
             L+   A+VN +D+ G T L  AC  G+K I   LL+  +     C + +T     +A 
Sbjct: 200 KALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPS-----CDISLTDRDGSTAL 254
Query: 167 MSEDSTDTNEIISML 181
           M       +EI SML
Sbjct: 255 MVALDAGQSEIASML 269

>pdb|4HBD|A Chain A, Crystal Structure Of Kank2 Ankyrin Repeats Length = 276

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 75/172 (43%), Gaps = 4/172 (2%)
Query: 116 VNDRDEKGYTPLHLACYLGNKNIVKFLL-SKKADVRAKCSMMVTPILAVSANMSEDSTDT 174
           VN  D  G T LH +    N  +V+ LL S    V  +     +PI+ ++A  +  + D 
Sbjct: 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIM-LTALATLKTQDD 162
Query: 175 NEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLL 234
            E +  L   G N+  K      + L  AV    + VV+ L+ C+AD N +   +    L
Sbjct: 163 IETVLQLFRLG-NINAKASQAGQTALMLAVSHGRVDVVKALLACEADVN-VQDDDGSTAL 220
Query: 235 FFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKR 286
             A E    +I    L   + D+S++D D ++ L  A   G  +I  ML  R
Sbjct: 221 MCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSR 272

>pdb|3SO8|A Chain A, Crystal Structure Of Ankra Length = 162

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 365 IDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCF 424
           I++   IN   ++  TPL++AA H  +   ++L+Q GA+  L       +   R      
Sbjct: 21  IEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL-------LGKGR------ 67
Query: 425 RSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGA 483
            SAL  AC  K   ++VK+LL  G DVN+  +     PL  A+     + VK L   GA
Sbjct: 68  ESALSLACS-KGYTDIVKMLLDCGVDVNEY-DWNGGTPLLYAVHGNHVKCVKMLLESGA 124

>pdb|3V2X|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 167

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 365 IDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCF 424
           I++   IN   ++  TPL++AA H  +   ++L+Q GA+  L       +   R      
Sbjct: 23  IEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL-------LGKGR------ 69
Query: 425 RSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGA 483
            SAL  AC  K   ++VK+LL  G DVN+  +     PL  A+     + VK L   GA
Sbjct: 70  ESALSLACS-KGYTDIVKMLLDCGVDVNEY-DWNGGTPLLYAVHGNHVKCVKMLLESGA 126

>pdb|2ZGG|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 92

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 94  LYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAK 152
           L  A   G    V +L+ +GA+V  +D+ G TPLHLA   G+  +VK LL   ADV A+
Sbjct: 10  LLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQ 68

>pdb|2FO1|E Chain E, Crystal Structure Of The Csl-Notch-Mastermind Ternary Complex Bound To Dna Length = 373

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 21/153 (13%)
Query: 82  DVNEKLQDGRTALYM-AILQGLYKMVT--LLIHHGANVN-------DRDE-KGYTPLHLA 130
           D+ E  ++G TAL + A  +G  ++ +  LL+  GA V+       D ++ KG T LH A
Sbjct: 227 DIEELDRNGXTALXIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYA 286
Query: 131 CYLGNKNIVKFLLSKKADVRAKCSM-MVTPI-LAVSANMSEDSTDTNEIISMLIENGANV 188
             + N  IVK+L+ +K   + K      TPI LA             E++  LI+ GA+V
Sbjct: 287 AQVSNXPIVKYLVGEKGSNKDKQDEDGKTPIXLAAQEGRI-------EVVXYLIQQGASV 339
Query: 189 REKMPFTDFSPLHFAVVKKNLSVVELLIKCKAD 221
            E +  TD +    A    + ++V++  +C+ +
Sbjct: 340 -EAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371

>pdb|2ZGD|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 110

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 106 VTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAK 152
           V +L+ +GA+V  +D+ G TPLHLA   G+  +VK LL   ADV A+
Sbjct: 40  VRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQ 86

>pdb|1AP7|A Chain A, P19-Ink4d From Mouse, Nmr, 20 Structures Length = 168

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 90  GRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADV 149
           G + ++ A   G    + +L+ HGA+VN  D  G  P+HLA   G+ ++V F L+ ++D+
Sbjct: 76  GTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGHSSVVSF-LAPESDL 134
Query: 150 RAKCSMMVTPI 160
             + +  +TP+
Sbjct: 135 HHRDASGLTPL 145

>pdb|3HRA|A Chain A, Crystal Structure Of Ef0377 An Ankyrin Repeat Protein Length = 201

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Query: 234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQ 293
           L  A      K V+  L    + V   D + N+ L+ A H  +++I + L+ R  DIN Q
Sbjct: 9   LLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQ 68
Query: 294 NRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVN 327
           N     P  +A   GR  T +  Y+L+  + ++N
Sbjct: 69  NSISDSPYLYAGAQGR--TEILAYMLKHATPDLN 100

>pdb|1BLX|B Chain B, P19ink4dCDK6 COMPLEX Length = 166

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 90  GRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADV 149
           G + ++ A   G    + +L+ HGA+VN  D  G  P+HLA   G+ ++V F L+ ++D+
Sbjct: 74  GTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGHSSVVSF-LAPESDL 132
Query: 150 RAKCSMMVTPI 160
             + +  +TP+
Sbjct: 133 HHRDASGLTPL 143

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	710
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-77
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	6e-77
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	4e-76
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-52
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	4e-62
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-36
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-32
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-20
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-13
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	9e-57
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	7e-53
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-45
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-43
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-41
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-38
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	5e-30
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	9e-27
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-20
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	2e-09
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-46
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	6e-42
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-36
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-34
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-32
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	5e-31
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-30
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-15
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-46
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	7e-41
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	1e-37
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	8e-37
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	3e-34
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	1e-30
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	7e-26
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	6e-18
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	4e-46
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	7e-42
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-35
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-35
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-25
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	4e-15
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	6e-08
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	1e-45
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	6e-39
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	1e-36
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-35
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-32
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	1e-31
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	7e-29
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-05
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	3e-44
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	3e-43
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	6e-38
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	9e-33
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	4e-29
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	4e-26
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-25
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	1e-15
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	1e-43
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-36
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	8e-36
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-34
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-30
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	4e-25
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-24
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	9e-07
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-43
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	3e-41
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	7e-39
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-35
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	3e-33
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-25
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-25
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-43
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	3e-41
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	3e-38
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	8e-31
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	4e-43
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-40
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	3e-37
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	4e-33
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-31
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-31
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-23
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	1e-40
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-36
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	4e-32
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	4e-29
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	8e-28
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	6e-19
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-40
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	3e-37
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	3e-33
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-31
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	1e-26
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	1e-25
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	7e-24
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	4e-23
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-39
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	3e-35
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	7e-31
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	9e-31
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	4e-29
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	8e-25
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	6e-23
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	5e-22
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-39
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	2e-36
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	3e-27
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	2e-25
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-38
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	4e-36
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	3e-30
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	6e-27
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	4e-25
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	3e-21
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	5e-05
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	6e-38
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	6e-35
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	7e-33
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	1e-27
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-25
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-24
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-22
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-16
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	6e-16
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	1e-04
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	7e-38
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-31
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-23
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	1e-22
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	8e-22
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	1e-21
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	4e-21
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	5e-20
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	7e-20
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-18
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	7e-14
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-09
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	9e-05
3v30_A	172	DNA-binding protein rfxank; structural genomics co	2e-35
3v30_A	172	DNA-binding protein rfxank; structural genomics co	5e-32
3v30_A	172	DNA-binding protein rfxank; structural genomics co	5e-27
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-23
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-23
3v30_A	172	DNA-binding protein rfxank; structural genomics co	2e-21
3v30_A	172	DNA-binding protein rfxank; structural genomics co	2e-21
3v30_A	172	DNA-binding protein rfxank; structural genomics co	7e-20
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	5e-34
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-32
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-27
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	1e-23
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	1e-21
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	1e-21
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	4e-20
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	7e-09
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	8e-04
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	6e-34
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	6e-27
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	7e-25
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	2e-24
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	6e-23
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	7e-34
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	6e-31
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	3e-24
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	5e-22
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-21
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	4e-21
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	2e-20
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	3e-18
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	9e-16
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-33
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	1e-22
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	7e-18
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	1e-17
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-15
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	3e-11
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	2e-33
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	8e-31
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-30
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	9e-26
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-20
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	8e-19
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	4e-18
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	2e-16
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-06
2rfa_A	232	Transient receptor potential cation channel subfa	4e-33
2rfa_A	232	Transient receptor potential cation channel subfa	2e-32
2rfa_A	232	Transient receptor potential cation channel subfa	1e-29
2rfa_A	232	Transient receptor potential cation channel subfa	1e-20
2rfa_A	232	Transient receptor potential cation channel subfa	2e-20
2rfa_A	232	Transient receptor potential cation channel subfa	1e-07
2rfa_A	232	Transient receptor potential cation channel subfa	6e-04
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	4e-33
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	6e-30
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-22
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	1e-20
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	1e-20
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	9e-19
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	3e-18
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	9e-18
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	9e-18
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-17
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	5e-17
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	5e-12
3hra_A	201	Ankyrin repeat family protein; structural protein;	8e-33
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-30
3hra_A	201	Ankyrin repeat family protein; structural protein;	3e-26
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-25
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-22
3hra_A	201	Ankyrin repeat family protein; structural protein;	3e-19
3hra_A	201	Ankyrin repeat family protein; structural protein;	8e-18
3hra_A	201	Ankyrin repeat family protein; structural protein;	4e-17
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-32
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-31
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	8e-27
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	4e-21
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	9e-21
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	4e-17
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	6e-32
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	6e-30
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-20
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-19
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	3e-17
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	6e-17
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-14
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	6e-31
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-27
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-19
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	3e-19
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-18
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	4e-18
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	3e-17
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	3e-15
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	4e-09
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	7e-31
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-24
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	3e-24
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-19
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	5e-18
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-17
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-17
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	9e-16
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	9e-16
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-13
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	8e-31
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	1e-28
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	8e-24
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	6e-19
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	2e-18
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	5e-18
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	6e-16
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-30
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	3e-27
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-19
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-18
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	3e-16
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	6e-15
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-14
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-13
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-13
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	5e-12
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	9e-05
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	3e-30
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-28
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	3e-18
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	6e-18
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-17
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	4e-17
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	5e-17
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	6e-17
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-16
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	5e-16
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	4e-30
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-27
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	4e-20
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-19
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	4e-17
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	2e-16
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	5e-16
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-15
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	7e-13
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	4e-11
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	8e-09
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	5e-30
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	2e-24
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	1e-18
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	5e-18
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	3e-15
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	1e-14
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	3e-13
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	9e-12
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	7e-29
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	9e-27
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	6e-19
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	7e-16
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	2e-15
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	3e-15
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	4e-15
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	3e-14
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	2e-12
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	9e-05
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-28
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	5e-28
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	3e-25
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	4e-23
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-22
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	3e-19
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	3e-19
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	8e-17
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-12
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	6e-28
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-21
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	6e-20
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	4e-19
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	4e-16
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	8e-15
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-14
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	4e-12
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	5e-11
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-07
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	4e-05
2pnn_A	273	Transient receptor potential cation channel subfa	3e-26
2pnn_A	273	Transient receptor potential cation channel subfa	8e-23
2pnn_A	273	Transient receptor potential cation channel subfa	2e-21
2pnn_A	273	Transient receptor potential cation channel subfa	1e-17
2pnn_A	273	Transient receptor potential cation channel subfa	2e-12
2pnn_A	273	Transient receptor potential cation channel subfa	4e-07
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-25
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	7e-25
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	7e-17
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	3e-16
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	1e-15
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-15
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	3e-14
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	1e-07
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-05
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	5e-25
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	3e-24
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-18
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	3e-16
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	4e-16
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-14
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	4e-13
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	2e-11
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	7e-11
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	3e-09
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-07
2etb_A	256	Transient receptor potential cation channel subfam	6e-25
2etb_A	256	Transient receptor potential cation channel subfam	4e-20
2etb_A	256	Transient receptor potential cation channel subfam	8e-20
2etb_A	256	Transient receptor potential cation channel subfam	7e-17
2etb_A	256	Transient receptor potential cation channel subfam	2e-13
2etb_A	256	Transient receptor potential cation channel subfam	2e-08
3jxi_A	260	Vanilloid receptor-related osmotically activated p	1e-23
3jxi_A	260	Vanilloid receptor-related osmotically activated p	2e-20
3jxi_A	260	Vanilloid receptor-related osmotically activated p	1e-16
3jxi_A	260	Vanilloid receptor-related osmotically activated p	1e-15
3jxi_A	260	Vanilloid receptor-related osmotically activated p	4e-14
3jxi_A	260	Vanilloid receptor-related osmotically activated p	4e-13
3jxi_A	260	Vanilloid receptor-related osmotically activated p	5e-10
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	6e-23
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	1e-19
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	5e-17
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	1e-15
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	4e-14
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	3e-13
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	9e-11
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	2e-09
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	3e-06
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	6e-06
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	5e-05
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	5e-22
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	6e-22
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	6e-16
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	3e-15
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	3e-13
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	4e-10
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	7e-09
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	3e-08
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	9e-08
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-07
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	1e-04
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-21
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-20
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	8e-16
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	2e-13
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	3e-04
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	7e-21
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	7e-19
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	3e-09
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	6e-08
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	2e-07
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	1e-06
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	3e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-15
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-10
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	4e-14
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	4e-12
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	4e-08
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	3e-05
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	2e-04
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	6e-14
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-13
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	1e-11
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	5e-09
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-06
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-05
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	4e-04
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	1e-13
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	4e-13
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	1e-12
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	6e-08
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	3e-07
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	2e-13
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	5e-09
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	3e-06
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	4e-05
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	1e-04

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  254 bits (651), Expect = 2e-77
 Identities = 107/531 (20%), Positives = 180/531 (33%), Gaps = 111/531 (20%)

Query: 82  DVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKF 141
                 + G T L++A   G   +V  L+  GA+ N  + K  TPLH+A   G+  + K+
Sbjct: 6   SGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKY 65

Query: 142 LLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLH 201
           LL  KA V AK     TP+   +            ++ +L+EN AN          +PLH
Sbjct: 66  LLQNKAKVNAKAKDDQTPLHCAARIGHT------NMVKLLLENNANPNLAT-TAGHTPLH 118

Query: 202 FAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISD 261
            A  + ++  V  L++ +A    + K    P L  A +   V++ E  L  ++   + + 
Sbjct: 119 IAAREGHVETVLALLEKEASQACMTKKGFTP-LHVAAKYGKVRVAE-LLLERDAHPNAAG 176

Query: 262 GDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQ 321
            +  + LH A H  NL IV++L+ R    ++       P+  A         VA  LLQ 
Sbjct: 177 KNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQN--QVEVARSLLQY 234

Query: 322 DSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITP 381
                                                           + NAE    +TP
Sbjct: 235 GG----------------------------------------------SANAESVQGVTP 248

Query: 382 LLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMV 441
           L  AA+    +    L+ K AN N               +    + L    +   ++ + 
Sbjct: 249 LHLAAQEGHAEMVALLLSKQANGN-------------LGNKSGLTPLHLVAQE-GHVPVA 294

Query: 442 KLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAH 501
            +L+ HG  V+ T+      PL VA   G+ ++VK L  + A ++ +           A 
Sbjct: 295 DVLIKHGVMVDATTRM-GYTPLHVASHYGNIKLVKFLLQHQADVNAKTK-LGYSPLHQA- 351

Query: 502 STTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWK 561
                                    +    D V   +++GA  N  S    + L      
Sbjct: 352 ------------------------AQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRL 387

Query: 562 GYEEIVDLL---LDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGA 609
           GY  + D+L    D  + V        +              V ++L    
Sbjct: 388 GYISVTDVLKVVTDETSFVLVSDKHRMSFPE----------TVDEILDVSE 428

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  252 bits (647), Expect = 6e-77
 Identities = 118/529 (22%), Positives = 187/529 (35%), Gaps = 119/529 (22%)

Query: 57  LTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANV 116
           LT L  A +   +  V+ LL  G    N       T L+MA   G  ++   L+ + A V
Sbjct: 15  LTPLHVASFMGHLPIVKNLLQRG-ASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV 73

Query: 117 NDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNE 176
           N + +   TPLH A  +G+ N+VK LL   A+     +   TP+   +           E
Sbjct: 74  NAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHV------E 127

Query: 177 IISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFF 236
            +  L+E  A+         F+PLH A     + V ELL++  A  N   K    P L  
Sbjct: 128 TVLALLEKEASQACMTKK-GFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTP-LHV 185

Query: 237 AIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
           A+  N++ IV+  L  +         +  + LH A     +++ + L++     NA++  
Sbjct: 186 AVHHNNLDIVK-LLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQ 244

Query: 297 FLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKR 356
            + P+  A   G  H  +   LL + +                                 
Sbjct: 245 GVTPLHLAAQEG--HAEMVALLLSKQA--------------------------------- 269

Query: 357 LDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISD 416
                        N N      +TPL   A+   +  A  LI+ G  V+           
Sbjct: 270 -------------NGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVD----------- 305

Query: 417 ARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVK 476
             ++     + L  A  H  NI++VK LL H ADVN  +      PL  A Q G   IV 
Sbjct: 306 --ATTRMGYTPLHVAS-HYGNIKLVKFLLQHQADVNAKTKL-GYSPLHQAAQQGHTDIVT 361

Query: 477 ELQNYGAQIDKENYLKNKE-------AARIAHSTTELEERKKINDLLKLNLDFLKNVRSN 529
            L   GA  ++     + +       A R+ +          + D+LK+           
Sbjct: 362 LLLKNGASPNE----VSSDGTTPLAIAKRLGY--------ISVTDVLKV----------- 398

Query: 530 KYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVN 578
                    ++ + V VS + R S           E VD +LD   D  
Sbjct: 399 -------VTDETSFVLVSDKHRMSFP---------ETVDEILDVSEDEG 431

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  250 bits (641), Expect = 4e-76
 Identities = 113/536 (21%), Positives = 191/536 (35%), Gaps = 111/536 (20%)

Query: 112 HGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDS 171
            G +     E G TPLH+A ++G+  IVK LL + A        + TP+   +       
Sbjct: 3   PGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHT-- 60

Query: 172 TDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQE 231
               E+   L++N A V  K    D +PLH A    + ++V+LL++  A+ NL       
Sbjct: 61  ----EVAKYLLQNKAKVNAKAKD-DQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHT 115

Query: 232 PLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDIN 291
           P L  A     V+ V   L  K    +       + LH A   G +++ ++L++R    N
Sbjct: 116 P-LHIAAREGHVETVL-ALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPN 173

Query: 292 AQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQ 351
           A  +  L P+  A+     +  + + LL +                              
Sbjct: 174 AAGKNGLTPLHVAVHHN--NLDIVKLLLPRGG---------------------------- 203

Query: 352 TQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQK 411
                             + ++   +  TPL  AAK   ++ A+ L+Q G + N      
Sbjct: 204 ------------------SPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSAN------ 239

Query: 412 AFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGD 471
                  +      + L  A + + + EMV LLL   A+ N   NK    PL +  Q G 
Sbjct: 240 -------AESVQGVTPLHLAAQ-EGHAEMVALLLSKQANGN-LGNKSGLTPLHLVAQEGH 290

Query: 472 FQIVKELQNYGAQIDKENYLKNKEAA-RIAHSTTELEERKKINDLLKLNLDFLKNVRSNK 530
             +   L  +G  +D     +       +A                              
Sbjct: 291 VPVADVLIKHGVMVDATT--RMGYTPLHVA-------------------------SHYGN 323

Query: 531 YDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHM 590
              VK  ++  A VN  ++   S L   A +G+ +IV LLL NGA  N  S+ G T L +
Sbjct: 324 IKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAI 383

Query: 591 ACRFHSNDNIVRKL---LHHGAYYDMKDGKTGKTPLKHAE------AGKNRDIIDL 637
           A R     ++   L       ++  + D K   +  +  +        +  ++I  
Sbjct: 384 AKR-LGYISVTDVLKVVTDETSFVLVSD-KHRMSFPETVDEILDVSEDEGEELISF 437

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  186 bits (476), Expect = 2e-52
 Identities = 85/456 (18%), Positives = 148/456 (32%), Gaps = 129/456 (28%)

Query: 184 NGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSV 243
            G +          +PLH A    +L +V+ L++  A  N                    
Sbjct: 3   PGISGGGGGES-GLTPLHVASFMGHLPIVKNLLQRGASPN-------------------- 41

Query: 244 KIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFF 303
                          +S+  + + LH A   G+ ++ + L++ K  +NA+ +    P+  
Sbjct: 42  ---------------VSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHC 86

Query: 304 AIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKR 363
           A  +G  HT++ + LL+ ++                                        
Sbjct: 87  AARIG--HTNMVKLLLENNA---------------------------------------- 104

Query: 364 IIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFC 423
                 N N       TPL  AA+   +++   L++K A+                    
Sbjct: 105 ------NPNLATTAGHTPLHIAAREGHVETVLALLEKEASQA-------------CMTKK 145

Query: 424 FRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGA 483
             + L  A K    + + +LLL   A  N         PL VA+   +  IVK L   G 
Sbjct: 146 GFTPLHVAAK-YGKVRVAELLLERDAHPNAAGKN-GLTPLHVAVHHNNLDIVKLLLPRGG 203

Query: 484 QIDKENYLKNKEAA-RIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGA 542
                    N      IA                          + N+ +  +  ++ G 
Sbjct: 204 SPHSPA--WNGYTPLHIA-------------------------AKQNQVEVARSLLQYGG 236

Query: 543 CVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVR 602
             N  S +  + L   A +G+ E+V LLL   A+ N  + +G T LH+  +   +  +  
Sbjct: 237 SANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQ-EGHVPVAD 295

Query: 603 KLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
            L+ HG   D    + G TPL  A    N  ++  L
Sbjct: 296 VLIKHGVMVDATT-RMGYTPLHVASHYGNIKLVKFL 330

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  211 bits (539), Expect = 4e-62
 Identities = 59/558 (10%), Positives = 137/558 (24%), Gaps = 203/558 (36%)

Query: 75  LLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLG 134
           +      +  +   +    +++A  +G    V  LI  G +   ++  G T LHLAC  G
Sbjct: 5   MTDFPKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFG 64

Query: 135 NKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPF 194
             +  K+L S                                       +G         
Sbjct: 65  CVDTAKYLASVGEVHSLW-------------------------------HG--------- 84

Query: 195 TDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKN 254
               P+H AV+     +V  L++   +                                 
Sbjct: 85  --QKPIHLAVMANKTDLVVALVEGAKERG------------------------------- 111

Query: 255 FDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHV 314
                                  ++       +   + ++      + + +G+G ++  +
Sbjct: 112 ----------QMPESLLNECDEREVN------EIGSHVKHCKGQTALHWCVGLGPEYLEM 155

Query: 315 AEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAE 374
            + L+Q  +                                              +  A+
Sbjct: 156 IKILVQLGA----------------------------------------------SPTAK 169

Query: 375 GDDMITPLLFAAKHCDLQSAKYLI-----QKGANVNLTETQKAFISDARSSDFCFRSALQ 429
                TPL+ A +  + ++   ++     +    ++              ++    S L 
Sbjct: 170 DKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLD-------------YANKQGNSHLH 216

Query: 430 YACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
           +A    N  ++    +  G DVN   N+    PL +++++    + KEL         + 
Sbjct: 217 WAIL-INWEDVAMRFVEMGIDVNMEDNE-HTVPLYLSVRAAMVLLTKELLQKTDVFLIQA 274

Query: 490 YLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSE 549
              +                                              +G  V     
Sbjct: 275 CPYH----------------------------------------------NGTTVLPDRV 288

Query: 550 RRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGA 609
                +   A    +E++ LL +   +V     TG        +  +   + R  L   A
Sbjct: 289 VWLDFVPAAADPSKQEVLQLLQEKLDEVVRSLNTGAGGAVKRKK-KAAPAVKRMKLAPSA 347

Query: 610 YYDMKDGKTGKTPLKHAE 627
               +  ++       ++
Sbjct: 348 PVRTRS-RSRARSSAVSK 364

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  140 bits (355), Expect = 1e-36
 Identities = 51/422 (12%), Positives = 99/422 (23%), Gaps = 114/422 (27%)

Query: 248 AFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGM 307
           +  +    +   SD +    +H A   G    V+ L++       QNR+    +  A   
Sbjct: 4   SMTDFPKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKF 63

Query: 308 GRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDR 367
           G      A+YL                                                 
Sbjct: 64  G--CVDTAKYLASVGE-------------------------------------------- 77

Query: 368 TENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLT-----------ETQKAFISD 416
               +        P+  A           L++                   E  +     
Sbjct: 78  --VHSLW--HGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEI---G 130

Query: 417 ARSSDFCFRSALQYACKHKNN-IEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIV 475
           +       ++AL +        +EM+K+L+  GA      +K  + PL  A++  + + +
Sbjct: 131 SHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPT-AKDKADETPLMRAMEFRNREAL 189

Query: 476 KEL-----QNYGAQIDKENYLKNKEAA-RIAHSTTELEERKKINDLLKLNLDFLKNVRSN 529
             +          ++D  N  K   +    A                         +  N
Sbjct: 190 DLMMDTVPSKSSLRLDYAN--KQGNSHLHWA-------------------------ILIN 222

Query: 530 KYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLD-------------NGAD 576
             D   + +E G  VN+        L          +   LL              NG  
Sbjct: 223 WEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTT 282

Query: 577 VNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIID 636
           V          +  A      + +++ L             TG       +      +  
Sbjct: 283 VLPDRVVWLDFVPAAADPSKQE-VLQLLQEKLDEVVRSL-NTGAGGAVKRKKKAAPAVKR 340

Query: 637 LL 638
           + 
Sbjct: 341 MK 342

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  128 bits (324), Expect = 2e-32
 Identities = 43/370 (11%), Positives = 89/370 (24%), Gaps = 127/370 (34%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGD--------------------HDVNEKLQDGRTALYMA 97
             +  AV  NK   V  L+                           + K   G+TAL+  
Sbjct: 86  KPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWC 145

Query: 98  ILQGLY--KMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSM 155
           +  G    +M+ +L+  GA+   +D+   TPL  A    N+  +  ++            
Sbjct: 146 VGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSK------ 199

Query: 156 MVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELL 215
                                       +   +         S LH+A++     V    
Sbjct: 200 ----------------------------SSLRLDYANKQ-GNSHLHWAILINWEDVAMRF 230

Query: 216 IKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVG 275
           ++   D N+    +  PL + ++ +  V + +  L        +   D+  +     H G
Sbjct: 231 VEMGIDVNMEDNEHTVPL-YLSVRAAMVLLTK-EL--------LQKTDVFLIQACPYHNG 280

Query: 276 NLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNL 335
                         +      +L  +  A         V + L ++              
Sbjct: 281 T------------TVLPDRVVWLDFVPAAADPS--KQEVLQLLQEKLD------------ 314

Query: 336 LLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAK 395
                                              +    +      +   K       +
Sbjct: 315 ----------------------------------EVVRSLNTGAGGAVKRKKKAAPAVKR 340

Query: 396 YLIQKGANVN 405
             +   A V 
Sbjct: 341 MKLAPSAPVR 350

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 92.6 bits (231), Expect = 2e-20
 Identities = 15/107 (14%), Positives = 26/107 (24%), Gaps = 12/107 (11%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDH------------DVNEKLQDGRTALYMAILQGLYKM 105
             L  +V    +   + LL   D              V          +  A      ++
Sbjct: 246 VPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEV 305

Query: 106 VTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAK 152
           + LL      V      G              + +  L+  A VR +
Sbjct: 306 LQLLQEKLDEVVRSLNTGAGGAVKRKKKAAPAVKRMKLAPSAPVRTR 352

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 72.2 bits (178), Expect = 1e-13
 Identities = 11/74 (14%), Positives = 23/74 (31%), Gaps = 1/74 (1%)

Query: 57  LTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANV 116
           L  + +A   +K   ++ L    D +V   L  G         +    +  + +   A V
Sbjct: 291 LDFVPAAADPSKQEVLQLLQEKLD-EVVRSLNTGAGGAVKRKKKAAPAVKRMKLAPSAPV 349

Query: 117 NDRDEKGYTPLHLA 130
             R         ++
Sbjct: 350 RTRSRSRARSSAVS 363

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  196 bits (500), Expect = 9e-57
 Identities = 78/417 (18%), Positives = 143/417 (34%), Gaps = 95/417 (22%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
            LL +A   N+ + +  L      + +       T L++A      ++V LL+ HGA+V+
Sbjct: 27  ELLEAARSGNEEKLMALLTPLN-VNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVH 85

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEI 177
            +D+ G  PLH AC  G+  + + LL   A V A      TP+   ++          E+
Sbjct: 86  AKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRV------EV 139

Query: 178 ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFA 237
            S+L+ +GA+          S +  A   +    +    K  +            LL  A
Sbjct: 140 CSLLLSHGADPTLVNCH-GKSAVDMAPTPELRERLTYEFKGHS------------LLQAA 186

Query: 238 IESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKAC---HVGNLQIVQMLVKRKFDINAQN 294
            E++  K+ +    +             + LH A    H    Q+ ++L+++  ++N +N
Sbjct: 187 READLAKVKK--TLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKN 244

Query: 295 RYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQI 354
           + F+ P+  A      H  V E L +  +                               
Sbjct: 245 KDFMTPLHVAAERA--HNDVMEVLHKHGA------------------------------- 271

Query: 355 KRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFI 414
                           +NA      T L  AA    LQ+ + L+  G++ ++   Q    
Sbjct: 272 ---------------KMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQG--- 313

Query: 415 SDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGD 471
                      +A Q         E V+ +L     +  +        L  A ++GD
Sbjct: 314 ----------FTAAQMGN------EAVQQILSESTPMRTSDVD---YRLLEASKAGD 351

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  185 bits (472), Expect = 7e-53
 Identities = 84/433 (19%), Positives = 146/433 (33%), Gaps = 93/433 (21%)

Query: 70  REVEFLLSTGDHDVNEKLQDGRTALYMAILQG-LYKMVTLLIHHGANVNDRDEKGYTPLH 128
           +    L            +  +  L  A   G   K++ LL     N +  D +  TPLH
Sbjct: 5   KSALDLADPS-AKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLH 63

Query: 129 LACYLGNKNIVKFLLSKKADVRAKCSMMVTP-ILAVSANMSEDSTDTNEIISMLIENGAN 187
           LA       IV+ LL   ADV AK    + P   A S           E+  +L+++GA 
Sbjct: 64  LAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGH-------YEVTELLLKHGAC 116

Query: 188 VREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVE 247
           V        F+PLH A  K  + V  LL+   AD  L+    +   +  A      + + 
Sbjct: 117 VNAMD-LWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSA-VDMAPTPELRERLT 174

Query: 248 AFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGM 307
                            +SLL  A    +L  V+  +  +     Q +     +  A+  
Sbjct: 175 YEFKG------------HSLLQAARE-ADLAKVKKTLALEIINFKQPQSHETALHCAVAS 221

Query: 308 G-RKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIID 366
              K   VAE LL++ +                                           
Sbjct: 222 LHPKRKQVAELLLRKGA------------------------------------------- 238

Query: 367 RTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRS 426
              N+N +  D +TPL  AA+       + L + GA +N             + D   ++
Sbjct: 239 ---NVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMN-------------ALDSLGQT 282

Query: 427 ALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQID 486
           AL  A     +++  +LLL +G+D +  S +       +       + V+++ +    + 
Sbjct: 283 ALHRAALA-GHLQTCRLLLSYGSDPSIISLQ-GFTAAQMGN-----EAVQQILSESTPMR 335

Query: 487 -KENYLKNKEAAR 498
             +   +  EA++
Sbjct: 336 TSDVDYRLLEASK 348

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  164 bits (417), Expect = 3e-45
 Identities = 80/421 (19%), Positives = 139/421 (33%), Gaps = 111/421 (26%)

Query: 211 VVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHK 270
               L    A   L  +  ++ LL  A   N  K++   L   N +   SDG  ++ LH 
Sbjct: 6   SALDLADPSAKAVLTGEYKKDELLEAARSGNEEKLMA-LLTPLNVNCHASDGRKSTPLHL 64

Query: 271 ACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPI 330
           A     ++IVQ+L++   D++A+++  L P+  A   G  H  V E LL+  +       
Sbjct: 65  AAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYG--HYEVTELLLKHGA------- 115

Query: 331 KRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCD 390
                                                   +NA      TPL  AA    
Sbjct: 116 ---------------------------------------CVNAMDLWQFTPLHEAASKNR 136

Query: 391 LQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGAD 450
           ++    L+  GA+  L                  +SA+  A       E +       + 
Sbjct: 137 VEVCSLLLSHGADPTLVNCHG-------------KSAVDMAPT-PELRERLTYEFKGHSL 182

Query: 451 VNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE-----AARIAHSTTE 505
           +              A +  D   VK+         K+   ++ E     A    H    
Sbjct: 183 LQ-------------AAREADLAKVKKTLALEIINFKQP--QSHETALHCAVASLH---- 223

Query: 506 LEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEE 565
             +RK++ +LL                     +  GA VN  ++   + L   A + + +
Sbjct: 224 -PKRKQVAELL---------------------LRKGANVNEKNKDFMTPLHVAAERAHND 261

Query: 566 IVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKH 625
           ++++L  +GA +N   + G TALH A     +    R LL +G+   +     G T  + 
Sbjct: 262 VMEVLHKHGAKMNALDSLGQTALHRAAL-AGHLQTCRLLLSYGSDPSIIS-LQGFTAAQM 319

Query: 626 A 626
            
Sbjct: 320 G 320

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  159 bits (406), Expect = 1e-43
 Identities = 81/549 (14%), Positives = 135/549 (24%), Gaps = 216/549 (39%)

Query: 89  DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGN-KNIVKFLLSKKA 147
            G++AL              L    A      E     L  A   GN + ++  L     
Sbjct: 3   FGKSAL-------------DLADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNV 49

Query: 148 DVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKK 207
           +  A                                              +PLH A    
Sbjct: 50  NCHASD-----------------------------GRK-----------STPLHLAAGYN 69

Query: 208 NLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSL 267
            + +V+LL++  AD +                                     D      
Sbjct: 70  RVRIVQLLLQHGADVH-----------------------------------AKDKGGLVP 94

Query: 268 LHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVN 327
           LH AC  G+ ++ ++L+K    +NA + +   P+  A         V   LL   +    
Sbjct: 95  LHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKN--RVEVCSLLLSHGA---- 148

Query: 328 LPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAK 387
                                                     +         + +  A  
Sbjct: 149 ------------------------------------------DPTLVNCHGKSAVDMAPT 166

Query: 388 HCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLH 447
               +   Y  +  +                         LQ A +   ++  VK  L  
Sbjct: 167 PELRERLTYEFKGHS------------------------LLQAARE--ADLAKVKKTLAL 200

Query: 448 GADVNDTSNKPKQKPLAVAIQSGDF---QIVKELQNYGAQIDKENYLKNKE-------AA 497
                       +  L  A+ S      Q+ + L   GA +++    KNK+       AA
Sbjct: 201 EIINFKQPQS-HETALHCAVASLHPKRKQVAELLLRKGANVNE----KNKDFMTPLHVAA 255

Query: 498 RIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIY 557
             AH          + ++L                      + GA +N       +AL  
Sbjct: 256 ERAH--------NDVMEVL---------------------HKHGAKMNALDSLGQTALHR 286

Query: 558 VAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGK 617
            A  G+ +   LLL  G+D +  S  GFTA  M          V+++L            
Sbjct: 287 AALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGNE------AVQQILSEST---PMRTS 337

Query: 618 TGKTPLKHA 626
                L  A
Sbjct: 338 DVDYRLLEA 346

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  154 bits (391), Expect = 1e-41
 Identities = 63/292 (21%), Positives = 109/292 (37%), Gaps = 39/292 (13%)

Query: 357 LDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISD 416
            ++++  +     N +A      TPL  AA +  ++  + L+Q GA+V+  +        
Sbjct: 37  EEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGG----- 91

Query: 417 ARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVK 476
                      L  AC +  + E+ +LLL HGA VN      +  PL  A      ++  
Sbjct: 92  --------LVPLHNACSY-GHYEVTELLLKHGACVNAMDLW-QFTPLHEAASKNRVEVCS 141

Query: 477 ELQNYGAQIDKENYLKNKE-------AARIAHSTTELEERKKINDLLKLNLDFLKNVRSN 529
            L ++GA         N         A           E ++           L+  R  
Sbjct: 142 LLLSHGADPTL----VNCHGKSAVDMAPT--------PELRERLTYEFKGHSLLQAAREA 189

Query: 530 KYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYE---EIVDLLLDNGADVNFKSATGFT 586
              +VKK +          +   +AL       +    ++ +LLL  GA+VN K+    T
Sbjct: 190 DLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMT 249

Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
            LH+A    ++++++  L  HGA  +  D   G+T L  A    +     LL
Sbjct: 250 PLHVAAE-RAHNDVMEVLHKHGAKMNALD-SLGQTALHRAALAGHLQTCRLL 299

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  145 bits (369), Expect = 1e-38
 Identities = 51/274 (18%), Positives = 94/274 (34%), Gaps = 33/274 (12%)

Query: 57  LTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANV 116
           L  L +A         E LL  G   VN       T L+ A  +   ++ +LL+ HGA+ 
Sbjct: 92  LVPLHNACSYGHYEVTELLLKHGA-CVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADP 150

Query: 117 NDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNE 176
              +  G + + +A     +  + +                + + A          D  +
Sbjct: 151 TLVNCHGKSAVDMAPTPELRERLTYEFKGH-----------SLLQAAREA------DLAK 193

Query: 177 IISMLIENGANVREKMPFTDFSPLHFAVVK---KNLSVVELLIKCKADTNLIVKVNQEPL 233
           +   L     N ++    +  + LH AV     K   V ELL++  A+ N   K    PL
Sbjct: 194 VKKTLALEIINFKQPQ--SHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPL 251

Query: 234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQ 293
              A E     ++E  L+     ++  D    + LH+A   G+LQ  ++L+    D +  
Sbjct: 252 -HVAAERAHNDVME-VLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSII 309

Query: 294 NRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVN 327
           +                     + +L +    + 
Sbjct: 310 SLQGFTAAQMG-------NEAVQQILSES-TPMR 335

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  121 bits (305), Expect = 5e-30
 Identities = 54/298 (18%), Positives = 92/298 (30%), Gaps = 76/298 (25%)

Query: 370 NINAEGDDMITPLLFAAKHCDLQS-AKYLIQKGANVNLTETQKAFISDARSSDFCFRSAL 428
                G+     LL AA+  + +     L     N +             +SD    + L
Sbjct: 16  KAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCH-------------ASDGRKSTPL 62

Query: 429 QYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKE 488
             A  + N + +V+LLL HGADV+         PL  A   G +++ + L  +GA ++  
Sbjct: 63  HLAAGY-NRVRIVQLLLQHGADVHAKDKG-GLVPLHNACSYGHYEVTELLLKHGACVNAM 120

Query: 489 NYLKNKE-----AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGAC 543
           +    +      AA             ++  LL                     +  GA 
Sbjct: 121 D--LWQFTPLHEAASKNR--------VEVCSLL---------------------LSHGAD 149

Query: 544 VNVSSERRGSALIYVAWKGYEEIVDLLLDN---------------------GADVNFKSA 582
             + +    SA+         E +                                 +  
Sbjct: 150 PTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQ 209

Query: 583 TGFTALHMACR--FHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
           +  TALH A          +   LL  GA  + K+ K   TPL  A    + D++++L
Sbjct: 210 SHETALHCAVASLHPKRKQVAELLLRKGANVNEKN-KDFMTPLHVAAERAHNDVMEVL 266

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  111 bits (279), Expect = 9e-27
 Identities = 52/270 (19%), Positives = 88/270 (32%), Gaps = 68/270 (25%)

Query: 394 AKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVND 453
           A  L    A   LT   K             +  L  A +  N  +++ LL     + + 
Sbjct: 7   ALDLADPSAKAVLTGEYK-------------KDELLEAARSGNEEKLMALLTPLNVNCH- 52

Query: 454 TSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAA-RIAHSTTELEERKKI 512
            S+  K  PL +A      +IV+ L  +GA +  ++  K        A            
Sbjct: 53  ASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKD--KGGLVPLHNA------------ 98

Query: 513 NDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLD 572
                             Y+  +  ++ GACVN     + + L   A K   E+  LLL 
Sbjct: 99  -------------CSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLS 145

Query: 573 NGADVNFKSATGFTALHMACRFHS--------------------NDNIVRKLLHHGAYYD 612
           +GAD    +  G +A+ MA                         +   V+K L       
Sbjct: 146 HGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINF 205

Query: 613 MKDGKTGKTPLKH--AEAG--KNRDIIDLL 638
            +  ++ +T L H    +   K + + +LL
Sbjct: 206 KQP-QSHETAL-HCAVASLHPKRKQVAELL 233

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 93.3 bits (233), Expect = 1e-20
 Identities = 40/205 (19%), Positives = 65/205 (31%), Gaps = 38/205 (18%)

Query: 439 EMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE--- 495
           +    L    A    T    K + L  A    + +++  L          +    K    
Sbjct: 5   KSALDLADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASD--GRKSTPL 62

Query: 496 --AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGS 553
             AA             +I  LL                     ++ GA V+   +    
Sbjct: 63  HLAAGYNR--------VRIVQLL---------------------LQHGADVHAKDKGGLV 93

Query: 554 ALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDM 613
            L      G+ E+ +LLL +GA VN      FT LH A    +   +   LL HGA   +
Sbjct: 94  PLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAAS-KNRVEVCSLLLSHGADPTL 152

Query: 614 KDGKTGKTPLKHAEAGKNRDIIDLL 638
            +   GK+ +  A   + R+ +   
Sbjct: 153 VN-CHGKSAVDMAPTPELRERLTYE 176

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 59.0 bits (144), Expect = 2e-09
 Identities = 19/77 (24%), Positives = 26/77 (33%), Gaps = 3/77 (3%)

Query: 563 YEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTP 622
           + +    L D  A            L  A R  + + ++  L          D     TP
Sbjct: 3   FGKSALDLADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASD-GRKSTP 61

Query: 623 LKHAEAGKNR-DIIDLL 638
           L H  AG NR  I+ LL
Sbjct: 62  L-HLAAGYNRVRIVQLL 77

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  165 bits (420), Expect = 2e-46
 Identities = 55/275 (20%), Positives = 91/275 (33%), Gaps = 14/275 (5%)

Query: 58  TLLCSAVWDNKIREVEFLLSTG--DHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGAN 115
           T L  AV       ++FLL        ++ +   G+TAL++A + G    V  L   GA 
Sbjct: 11  TALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG 70

Query: 116 VNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDST--- 172
           V   +  G+T LHLAC +        LL  +       S             +  +    
Sbjct: 71  VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAV 130

Query: 173 -----DTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVK 227
                  NE      +    +  +      +PLH AV+ K+  +V LL    AD N    
Sbjct: 131 DSQPNPENEEEPRDEDWRLQLEAENYD-GHTPLHVAVIHKDAEMVRLLRDAGADLNKPEP 189

Query: 228 VNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRK 287
                 L  A+E+ +  ++E  L     D +       + L  A    N  + ++L    
Sbjct: 190 TCGRTPLHLAVEAQAASVLE-LLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHG 248

Query: 288 FDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQD 322
                     L P   +       +   +   + D
Sbjct: 249 APEPEDGGDKLSPCSSSGSDS--DSDNRDEGDEYD 281

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  153 bits (388), Expect = 6e-42
 Identities = 54/404 (13%), Positives = 105/404 (25%), Gaps = 128/404 (31%)

Query: 83  VNEKLQDGRTALYMAILQGLYKMVTLLIHHGAN---VNDRDEKGYTPLHLACYLGNKNIV 139
                +DG TAL++A++      +  L+   A    ++ +++ G T LHLA  LG  + V
Sbjct: 2   FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTV 61

Query: 140 KFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSP 199
           + L +  A V                                   G            + 
Sbjct: 62  EKLYAAGAGVLVAE-----------------------------RGG-----------HTA 81

Query: 200 LHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSI 259
           LH A   +  +   +L++ +                        +       +++ D + 
Sbjct: 82  LHLACRVRAHTCACVLLQPRPSHP--------------------RDASDTYLTQSQDCTP 121

Query: 260 SDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLL 319
                      +      +        +  + A+N     P+  A+        +   L 
Sbjct: 122 DTSHA-PAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHK--DAEMVRLLR 178

Query: 320 QQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINA-EGDDM 378
              +                                              ++N  E    
Sbjct: 179 DAGA----------------------------------------------DLNKPEPTCG 192

Query: 379 ITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNI 438
            TPL  A +       + L++ GA+               +  +  R+ L  A   + N 
Sbjct: 193 RTPLHLAVEAQAASVLELLLKAGADPT-------------ARMYGGRTPLGSAL-LRPNP 238

Query: 439 EMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYG 482
            + +LL  HGA         K  P + +    D     E   Y 
Sbjct: 239 ILARLLRAHGAPEP-EDGGDKLSPCSSSGSDSDSDNRDEGDEYD 281

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  138 bits (349), Expect = 1e-36
 Identities = 51/269 (18%), Positives = 85/269 (31%), Gaps = 27/269 (10%)

Query: 371 INAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQY 430
                +D  T L  A  H       +L+   A     + Q          +   ++AL  
Sbjct: 2   FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQ----------NDLGQTALHL 51

Query: 431 ACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENY 490
           A         V+ L   GA V           L +A +         L        ++  
Sbjct: 52  AAIL-GEASTVEKLYAAGAGVLVAERG-GHTALHLACRVRAHTCACVLLQPRPSHPRDA- 108

Query: 491 LKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSER 550
                      S T L + +            + +  + + +E  ++ +    +   +  
Sbjct: 109 -----------SDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYD 157

Query: 551 RGSALIYVAWKGYEEIVDLLLDNGADVNFKSAT-GFTALHMACRFHSNDNIVRKLLHHGA 609
             + L         E+V LL D GAD+N    T G T LH+A       +++  LL  GA
Sbjct: 158 GHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVE-AQAASVLELLLKAGA 216

Query: 610 YYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
               +    G+TPL  A    N  +  LL
Sbjct: 217 DPTARM-YGGRTPLGSALLRPNPILARLL 244

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  131 bits (333), Expect = 2e-34
 Identities = 50/292 (17%), Positives = 84/292 (28%), Gaps = 70/292 (23%)

Query: 368 TENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSA 427
            E ++ + D   T L  AA   +  + + L   GA V + E                 +A
Sbjct: 35  HEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGG-------------HTA 81

Query: 428 LQYACKHKNNIEMVKLLLLHGADVN------------DTSNKPKQKPLAVAIQSGDFQIV 475
           L  AC+         +LL                   D +      P AV  Q       
Sbjct: 82  LHLACR-VRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEE 140

Query: 476 KE-LQNYGAQIDKENYLKNKE-------AARIAHSTTELEERKKINDLLKLNLDFLKNVR 527
           +   +++  Q++     +N +       A           +  ++  LL           
Sbjct: 141 EPRDEDWRLQLEA----ENYDGHTPLHVAVI--------HKDAEMVRLL----------- 177

Query: 528 SNKYDEVKKNIEDGACVNVSSERRGS-ALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
                      + GA +N      G   L          +++LLL  GAD   +   G T
Sbjct: 178 ----------RDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRT 227

Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
            L  A    +   + R L  HGA           +P   + +  + D  D  
Sbjct: 228 PLGSALLRPNPI-LARLLRAHGAPEPEDG-GDKLSPCSSSGSDSDSDNRDEG 277

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  126 bits (319), Expect = 1e-32
 Identities = 53/292 (18%), Positives = 90/292 (30%), Gaps = 49/292 (16%)

Query: 199 PLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVS 258
            LH AV+ ++   ++ L+   A    +                         + +N    
Sbjct: 12  ALHLAVIHQHEPFLDFLLGFSAGHEYL-------------------------DLQN---- 42

Query: 259 ISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYL 318
              G   + LH A  +G    V+ L      +    R     +  A  +       A  L
Sbjct: 43  -DLG--QTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVR--AHTCACVL 97

Query: 319 LQQD-SINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDD 377
           LQ   S   +          D             +Q    ++   R  D    + AE  D
Sbjct: 98  LQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYD 157

Query: 378 MITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNN 437
             TPL  A  H D +  + L   GA++N                   R+ L  A      
Sbjct: 158 GHTPLHVAVIHKDAEMVRLLRDAGADLN-----------KPEPTCG-RTPLHLAV-EAQA 204

Query: 438 IEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
             +++LLL  GAD         + PL  A+   +  + + L+ +GA   ++ 
Sbjct: 205 ASVLELLLKAGADPTARMYG-GRTPLGSALLRPNPILARLLRAHGAPEPEDG 255

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  121 bits (307), Expect = 5e-31
 Identities = 41/337 (12%), Positives = 79/337 (23%), Gaps = 79/337 (23%)

Query: 268 LHKACHVGNLQIVQMLVKR---KFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSI 324
           LH A    +   +  L+        ++ QN      +  A  +G       E L    + 
Sbjct: 13  LHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILG--EASTVEKLYAAGA- 69

Query: 325 NVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLF 384
                                                         +        T L  
Sbjct: 70  ---------------------------------------------GVLVAERGGHTALHL 84

Query: 385 AAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLL 444
           A +      A  L+Q   +     +          +     +      +     E     
Sbjct: 85  ACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRD 144

Query: 445 LLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIA-HST 503
                 +   +      PL VA+   D ++V+ L++ GA ++K          R   H  
Sbjct: 145 EDWRLQLEAENYD-GHTPLHVAVIHKDAEMVRLLRDAGADLNK----PEPTCGRTPLHLA 199

Query: 504 TELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGY 563
            E  +   + +LL                     ++ GA          + L     +  
Sbjct: 200 VE-AQAASVLELL---------------------LKAGADPTARMYGGRTPLGSALLRPN 237

Query: 564 EEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNI 600
             +  LL  +GA          +    +     +DN 
Sbjct: 238 PILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDSDNR 274

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  120 bits (304), Expect = 1e-30
 Identities = 34/168 (20%), Positives = 61/168 (36%), Gaps = 11/168 (6%)

Query: 52  AKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIH 111
             +        +  + +  E           +  +  DG T L++A++    +MV LL  
Sbjct: 121 PDTSHAPAAVDSQPNPENEEEPRDEDWR-LQLEAENYDGHTPLHVAVIHKDAEMVRLLRD 179

Query: 112 HGANVNDRDEK-GYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTP-ILAVSANMSE 169
            GA++N  +   G TPLHLA      ++++ LL   AD  A+     TP   A+      
Sbjct: 180 AGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRP--- 236

Query: 170 DSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIK 217
                  +  +L  +GA   E       SP   +    +    +   +
Sbjct: 237 ----NPILARLLRAHGAPEPEDGGD-KLSPCSSSGSDSDSDNRDEGDE 279

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 76.4 bits (189), Expect = 2e-15
 Identities = 22/116 (18%), Positives = 33/116 (28%), Gaps = 14/116 (12%)

Query: 540 DGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDN 599
               +++ ++   +AL   A  G    V+ L   GA V      G TALH+ACR      
Sbjct: 34  GHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACR-VRAHT 92

Query: 600 IVRKLLHHGAYYDMKD------------GKTGKTPLKHAEAGKNRDIIDLLHLIDN 643
               LL     +                  T   P          +  +     D 
Sbjct: 93  CACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPR-DEDW 147

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  165 bits (420), Expect = 2e-46
 Identities = 68/372 (18%), Positives = 126/372 (33%), Gaps = 103/372 (27%)

Query: 89  DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEK-GYTPLHLACYLGNKNIVKFLLSKKA 147
           +    L  A+      +V  L+  GANVN ++E+ G+TPLH A  +  ++IV+ LL   A
Sbjct: 4   EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63

Query: 148 DVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTD---FSPLHFAV 204
           D   +     TP L  +   S       +++ + +  GA+V E     D   F+    A 
Sbjct: 64  DPVLRKKNGATPFLLAAIAGSV------KLLKLFLSKGADVNEC----DFYGFTAFMEAA 113

Query: 205 VKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDL 264
           V   +  ++ L K  A+ NL                               D        
Sbjct: 114 VYGKVKALKFLYKRGANVNL-------------------------RRKTKEDQERLRKGG 148

Query: 265 NSLLHKACHVGNLQIVQMLV-KRKFDINAQNRYFLPPMFFAIGMGRKHTH--VAEYLLQQ 321
            + L  A   G+++++++L+ +   D+NA +      +  A+          +   LL  
Sbjct: 149 ATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDH 208

Query: 322 DSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITP 381
            +                                              ++N  G+   TP
Sbjct: 209 GA----------------------------------------------DVNVRGERGKTP 222

Query: 382 LLFAAKHCDLQSAKYLI-QKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEM 440
           L+ A +   L   + L+ Q+   +N              +D   ++AL  A +     ++
Sbjct: 223 LILAVEKKHLGLVQRLLEQEHIEIN-------------DTDSDGKTALLLAVE-LKLKKI 268

Query: 441 VKLLLLHGADVN 452
            +LL   GA  +
Sbjct: 269 AELLCKRGASTD 280

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  149 bits (380), Expect = 7e-41
 Identities = 60/255 (23%), Positives = 112/255 (43%), Gaps = 30/255 (11%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           T L +AV  ++   VE LL  G  D   + ++G T   +A + G  K++ L +  GA+VN
Sbjct: 41  TPLHNAVQMSREDIVELLLRHG-ADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVN 99

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAK----------CSMMVTPILAVSANM 167
           + D  G+T    A   G    +KFL  + A+V  +               T ++  +   
Sbjct: 100 ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKG 159

Query: 168 SEDSTDTNEIISMLI-ENGANVREKMPFTD---FSPLHFAVVKKNLS----VVELLIKCK 219
                   E++ +L+ E GA+V       D    + L  A++  + S    +  LL+   
Sbjct: 160 HV------EVLKILLDEMGADVNAC----DNMGRNALIHALLSSDDSDVEAITHLLLDHG 209

Query: 220 ADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQI 279
           AD N+  +  + P L  A+E   + +V+  L  ++ +++ +D D  + L  A  +   +I
Sbjct: 210 ADVNVRGERGKTP-LILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKI 268

Query: 280 VQMLVKRKFDINAQN 294
            ++L KR    +  +
Sbjct: 269 AELLCKRGASTDCGD 283

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  141 bits (357), Expect = 1e-37
 Identities = 73/370 (19%), Positives = 117/370 (31%), Gaps = 111/370 (30%)

Query: 265 NSLLHKACHVGNLQIVQMLVKRKFDINAQNRYF-LPPMFFAIGMGRKHTHVAEYLLQQDS 323
           N LL KA    ++ +VQ L++   ++N Q       P+  A+ M      + E LL+  +
Sbjct: 6   NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMS--REDIVELLLRHGA 63

Query: 324 INVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLL 383
                                                         +      +  TP L
Sbjct: 64  ----------------------------------------------DPVLRKKNGATPFL 77

Query: 384 FAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKL 443
            AA    ++  K  + KGA+VN               DF   +A   A      ++ +K 
Sbjct: 78  LAAIAGSVKLLKLFLSKGADVN-------------ECDFYGFTAFMEAAV-YGKVKALKF 123

Query: 444 LLLHGADVNDTSNKPKQK---------PLAVAIQSGDFQIVKEL-QNYGAQIDKENYLKN 493
           L   GA+VN      + +          L  A + G  +++K L    GA ++      +
Sbjct: 124 LYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNA----CD 179

Query: 494 KE-------AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNV 546
                    A   +  +        I  LL                     ++ GA VNV
Sbjct: 180 NMGRNALIHALLSSDDSDVEA----ITHLL---------------------LDHGADVNV 214

Query: 547 SSERRGSALIYVAWKGYEEIVDLLLDN-GADVNFKSATGFTALHMACRFHSNDNIVRKLL 605
             ER  + LI    K +  +V  LL+    ++N   + G TAL +A        I   L 
Sbjct: 215 RGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKK-IAELLC 273

Query: 606 HHGAYYDMKD 615
             GA  D  D
Sbjct: 274 KRGASTDCGD 283

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  138 bits (351), Expect = 8e-37
 Identities = 67/291 (23%), Positives = 110/291 (37%), Gaps = 48/291 (16%)

Query: 359 QIIKRIIDRTENINAEGDDM-ITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDA 417
            +++++++   N+N + ++   TPL  A +       + L++ GA+  L           
Sbjct: 19  DLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLR---------- 68

Query: 418 RSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKE 477
                   +    A     +++++KL L  GADVN+            A   G  + +K 
Sbjct: 69  ---KKNGATPFLLAAI-AGSVKLLKLFLSKGADVNECDFY-GFTAFMEAAVYGKVKALKF 123

Query: 478 LQNYGAQIDKENYLKNKEAARIAHSTTEL-----EERKKINDLLKLNLDFLKNVRSNKYD 532
           L   GA ++     K  +        T L     +   ++  +L   LD           
Sbjct: 124 LYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKIL---LD----------- 169

Query: 533 EVKKNIEDGACVNVSSERRGSALIYVAWKG----YEEIVDLLLDNGADVNFKSATGFTAL 588
                 E GA VN       +ALI+          E I  LLLD+GADVN +   G T L
Sbjct: 170 ------EMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPL 223

Query: 589 HMACRFHSNDNIVRKLL-HHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
            +A        +V++LL       +  D   GKT L  A   K + I +LL
Sbjct: 224 ILAVEKKHLG-LVQRLLEQEHIEINDTD-SDGKTALLLAVELKLKKIAELL 272

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  131 bits (332), Expect = 3e-34
 Identities = 66/269 (24%), Positives = 112/269 (41%), Gaps = 47/269 (17%)

Query: 380 TPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIE 439
             L+ A ++ D+   + L++ GANVN  E            +    + L  A    +  +
Sbjct: 7   HLLIKAVQNEDVDLVQQLLEGGANVNFQE------------EEGGWTPLHNAV-QMSRED 53

Query: 440 MVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE---- 495
           +V+LLL HGAD           P  +A  +G  +++K   + GA +++ +          
Sbjct: 54  IVELLLRHGADPVLRKKN-GATPFLLAAIAGSVKLLKLFLSKGADVNECD--FYGFTAFM 110

Query: 496 -AARIAH-STTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGS 553
            AA        +         L K   +   N+R    ++ ++  + GA          +
Sbjct: 111 EAAVYGKVKALKF--------LYKRGAN--VNLRRKTKEDQERLRKGGA----------T 150

Query: 554 ALIYVAWKGYEEIVDLLLDN-GADVNFKSATGFTALHMACRFHSNDN---IVRKLLHHGA 609
           AL+  A KG+ E++ +LLD  GADVN     G  AL  A     + +   I   LL HGA
Sbjct: 151 ALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGA 210

Query: 610 YYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
             +++  + GKTPL  A   K+  ++  L
Sbjct: 211 DVNVRG-ERGKTPLILAVEKKHLGLVQRL 238

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  121 bits (305), Expect = 1e-30
 Identities = 63/390 (16%), Positives = 127/390 (32%), Gaps = 121/390 (31%)

Query: 198 SPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDV 257
             L  AV  +++ +V+ L++  A+                            +N +  + 
Sbjct: 7   HLLIKAVQNEDVDLVQQLLEGGAN----------------------------VNFQEEEG 38

Query: 258 SISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEY 317
             +       LH A  +    IV++L++   D   + +    P   A   G     + + 
Sbjct: 39  GWT------PLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAG--SVKLLKL 90

Query: 318 LLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDD 377
            L + +                                              ++N     
Sbjct: 91  FLSKGA----------------------------------------------DVNECDFY 104

Query: 378 MITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNN 437
             T  + AA +  +++ K+L ++GANVN    ++    D         +AL  A + K +
Sbjct: 105 GFTAFMEAAVYGKVKALKFLYKRGANVN---LRRKTKEDQERLRKGGATALMDAAE-KGH 160

Query: 438 IEMVKLLLLH-GADVNDTSNKPKQKPLAVAIQSGDF----QIVKELQNYGAQIDKENYLK 492
           +E++K+LL   GADVN   +   +  L  A+ S D      I   L ++GA ++     +
Sbjct: 161 VEVLKILLDEMGADVN-ACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRG--E 217

Query: 493 NKEAA-RIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIE-DGACVNVSSER 550
             +    +A                         V       V++ +E +   +N +   
Sbjct: 218 RGKTPLILA-------------------------VEKKHLGLVQRLLEQEHIEINDTDSD 252

Query: 551 RGSALIYVAWKGYEEIVDLLLDNGADVNFK 580
             +AL+       ++I +LL   GA  +  
Sbjct: 253 GKTALLLAVELKLKKIAELLCKRGASTDCG 282

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  107 bits (269), Expect = 7e-26
 Identities = 48/214 (22%), Positives = 75/214 (35%), Gaps = 42/214 (19%)

Query: 425 RSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQ 484
              L  A +   ++++V+ LL  GA+VN    +    PL  A+Q     IV+ L  +GA 
Sbjct: 6   NHLLIKAVQ-NEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD 64

Query: 485 IDKENYLKNKEAA-RIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGAC 543
                  KN      +A                           +     +K  +  GA 
Sbjct: 65  PVLRK--KNGATPFLLA-------------------------AIAGSVKLLKLFLSKGAD 97

Query: 544 VNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFK----------SATGFTALHMACR 593
           VN       +A +  A  G  + +  L   GA+VN +             G TAL  A  
Sbjct: 98  VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 157

Query: 594 FHSNDNIVRKLL-HHGAYYDMKDGKTGKTPLKHA 626
               + +++ LL   GA  +  D   G+  L HA
Sbjct: 158 KGHVE-VLKILLDEMGADVNACD-NMGRNALIHA 189

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 83.7 bits (208), Expect = 6e-18
 Identities = 40/202 (19%), Positives = 73/202 (36%), Gaps = 37/202 (18%)

Query: 456 NKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDL 515
                  L  A+Q+ D  +V++L   GA ++ +           A               
Sbjct: 2   AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNA--------------- 46

Query: 516 LKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGA 575
                     V+ ++ D V+  +  GA   +  +   +  +  A  G  +++ L L  GA
Sbjct: 47  ----------VQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGA 96

Query: 576 DVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKD---------GKTGKTPLKHA 626
           DVN     GFTA   A  +      ++ L   GA  +++           K G T L  A
Sbjct: 97  DVNECDFYGFTAFMEAAVYGKVK-ALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDA 155

Query: 627 EAGKNRDIIDLLHLIDNLFASV 648
               + +++ +  L+D + A V
Sbjct: 156 AEKGHVEVLKI--LLDEMGADV 175

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  167 bits (425), Expect = 4e-46
 Identities = 58/414 (14%), Positives = 119/414 (28%), Gaps = 98/414 (23%)

Query: 80  DHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIV 139
               NE               G   +      +     + + +    LH     G+  I 
Sbjct: 51  KRQRNELQHYSLYPNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTEAA-GSYAIT 109

Query: 140 KFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDT--NEIISMLIENGANVREKMPFTDF 197
           + +  +  ++        T +  +++N S + ++          I  GA+V       + 
Sbjct: 110 EPITRESVNIIDPRHNR-TVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMD-CDEN 167

Query: 198 SPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDV 257
           +PL  AV+ +   +V  L+K  AD                                    
Sbjct: 168 TPLMLAVLARRRRLVAYLMKAGADPT---------------------------------- 193

Query: 258 SISDGDLNSLLHKACHVGNLQIVQMLVKRKF---DINAQNRYFLPPMFFAIGMGRK-HTH 313
            I +    S LH+A    +  ++  ++       DI   +R  +  +        +    
Sbjct: 194 -IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVA 252

Query: 314 VAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINA 373
            A+ L+++    V+                                      D     ++
Sbjct: 253 SAKLLVEKG-AKVD-------------------------------------YDGAARKDS 274

Query: 374 EGDDMITPLLFAAKHCDLQSAKYLI-QKGANVNLTETQKAFISDARSSDFCFRSALQYAC 432
           E     T L +AA+  ++   KYL+ +KG+N +               D   ++ +  A 
Sbjct: 275 EKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKD-------------KQDEDGKTPIMLAA 321

Query: 433 KHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQID 486
           +    IE+V  L+  GA V             +A  +    IV        + +
Sbjct: 322 QE-GRIEVVMYLIQQGASVEAVDAT-DHTARQLAQANNHHNIVDIFDRCRPERE 373

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  155 bits (394), Expect = 7e-42
 Identities = 65/414 (15%), Positives = 121/414 (29%), Gaps = 101/414 (24%)

Query: 80  DHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIV 139
           +   ++ +   + +L  A   G         +     N+       P       GN  + 
Sbjct: 27  NRKNHQSITSSQHSLLEASYDG---------YIKRQRNELQHYSLYPNPQGYGNGNDFLG 77

Query: 140 KFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSP 199
            F  +                L   A  S        I   +     N+ +     + + 
Sbjct: 78  DFNHTNLQIPTEPEPESPIK-LHTEAAGSY------AITEPITRESVNIIDPR--HNRTV 128

Query: 200 LHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSI 259
           LH+     +    E LI                        +  K       +   DV+ 
Sbjct: 129 LHWIASNSSAEKSEDLI-----------------------VHEAK----ECIAAGADVNA 161

Query: 260 SDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLL 319
            D D N+ L  A      ++V  L+K   D    N+     +  A         +  Y+L
Sbjct: 162 MDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANR--DFGMMVYML 219

Query: 320 QQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMI 379
               +                                             +I     + +
Sbjct: 220 NSTKLKG-------------------------------------------DIEELDRNGM 236

Query: 380 TPLLFAAK---HCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKN 436
           T L+  A       + SAK L++KGA V+         +   S  +  R+AL YA +  +
Sbjct: 237 TALMIVAHNEGRDQVASAKLLVEKGAKVDYDGA-----ARKDSEKYKGRTALHYAAQV-S 290

Query: 437 NIEMVKLLLLH-GADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
           N+ +VK L+   G++ +       + P+ +A Q G  ++V  L   GA ++  +
Sbjct: 291 NMPIVKYLVGEKGSNKDKQDED-GKTPIMLAAQEGRIEVVMYLIQQGASVEAVD 343

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  137 bits (347), Expect = 2e-35
 Identities = 45/252 (17%), Positives = 95/252 (37%), Gaps = 25/252 (9%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDH-------DVNEKLQDGRTALYMAILQGLYKMVTLLI 110
           T+L     ++   + E L+            DVN    D  T L +A+L    ++V  L+
Sbjct: 127 TVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLM 186

Query: 111 HHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKK---ADVRAKCSMMVTP-ILAVSAN 166
             GA+    ++   + LH A    +  ++ ++L+      D+       +T  ++     
Sbjct: 187 KAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNE 246

Query: 167 MSEDSTDTNEIISMLIENGANVREKMPFTDFS-------PLHFAVVKKNLSVVELLIKCK 219
                 D      +L+E GA V         S        LH+A    N+ +V+ L+  K
Sbjct: 247 ----GRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEK 302

Query: 220 -ADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQ 278
            ++ +   +  + P +  A +   +++V  +L  +   V   D   ++    A    +  
Sbjct: 303 GSNKDKQDEDGKTP-IMLAAQEGRIEVVM-YLIQQGASVEAVDATDHTARQLAQANNHHN 360

Query: 279 IVQMLVKRKFDI 290
           IV +  + + + 
Sbjct: 361 IVDIFDRCRPER 372

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  137 bits (346), Expect = 2e-35
 Identities = 60/447 (13%), Positives = 124/447 (27%), Gaps = 128/447 (28%)

Query: 199 PLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVS 258
            L  A     +      ++  +                   + +  + + F ++     +
Sbjct: 40  SLLEASYDGYIKRQRNELQHYSLYPNP----------QGYGNGNDFLGD-FNHTNLQIPT 88

Query: 259 ISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYL 318
             + +    LH     G+  I + + +   +I     +    + +           +E L
Sbjct: 89  EPEPESPIKLHTEAA-GSYAITEPITRESVNIIDPR-HNRTVLHWIASNS--SAEKSEDL 144

Query: 319 LQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDM 378
           +                                          K  I    ++NA   D 
Sbjct: 145 I--------------------------------------VHEAKECIAAGADVNAMDCDE 166

Query: 379 ITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNI 438
            TPL+ A      +   YL++ GA+                 +   RSAL  A  +  + 
Sbjct: 167 NTPLMLAVLARRRRLVAYLMKAGADPT-------------IYNKSERSALHQAAAN-RDF 212

Query: 439 EMVKLLLLH---GADVNDTSNKPKQKPLAVAIQSG---DFQIVKELQNYGAQIDKENYLK 492
            M+  +L       D+ +         L +   +         K L   GA++       
Sbjct: 213 GMMVYMLNSTKLKGDIEELDRN-GMTALMIVAHNEGRDQVASAKLLVEKGAKV------- 264

Query: 493 NKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRG 552
                                           +       + +K    G           
Sbjct: 265 --------------------------------DYDGAARKDSEKY--KGR---------- 280

Query: 553 SALIYVAWKGYEEIVDLLL-DNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYY 611
           +AL Y A      IV  L+ + G++ + +   G T + +A +    + +V  L+  GA  
Sbjct: 281 TALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIE-VVMYLIQQGASV 339

Query: 612 DMKDGKTGKTPLKHAEAGKNRDIIDLL 638
           +  D  T  T  + A+A  + +I+D+ 
Sbjct: 340 EAVD-ATDHTARQLAQANNHHNIVDIF 365

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  108 bits (272), Expect = 1e-25
 Identities = 33/278 (11%), Positives = 68/278 (24%), Gaps = 74/278 (26%)

Query: 370 NINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQ 429
             N      + P      + +     +                        +      L 
Sbjct: 53  QRNELQHYSLYPNPQGYGNGNDFLGDFNHTNLQIPT-------------EPEPESPIKLH 99

Query: 430 YACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
                  +  + + +     ++ D  +   +  L     +   +  ++L           
Sbjct: 100 TEAA--GSYAITEPITRESVNIIDPRHN--RTVLHWIASNSSAEKSEDL----------- 144

Query: 490 YLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSE 549
                    I H                               E K+ I  GA VN    
Sbjct: 145 ---------IVH-------------------------------EAKECIAAGADVNAMDC 164

Query: 550 RRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHH-- 607
              + L+         +V  L+  GAD    + +  +ALH A        ++  +L+   
Sbjct: 165 DENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFG-MMVYMLNSTK 223

Query: 608 -GAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL-HLIDN 643
                +  D + G T L      + RD +     L++ 
Sbjct: 224 LKGDIEELD-RNGMTALMIVAHNEGRDQVASAKLLVEK 260

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 76.9 bits (190), Expect = 4e-15
 Identities = 30/222 (13%), Positives = 62/222 (27%), Gaps = 49/222 (22%)

Query: 425 RSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQ 484
           + +L  A  +   I+  +  L H +            P      +G+  +          
Sbjct: 38  QHSLLEAS-YDGYIKRQRNELQHYSLY----------PNPQGYGNGNDFLGDFNHTNLQI 86

Query: 485 IDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACV 544
             +                                   L    +  Y   +    +   +
Sbjct: 87  PTEPE--PESPIK-------------------------LHTEAAGSYAITEPITRESVNI 119

Query: 545 NVSSERRGSALIYVAWKGYEEIVDLLL--------DNGADVNFKSATGFTALHMACRFHS 596
                 R + L ++A     E  + L+          GADVN       T L +A     
Sbjct: 120 IDPRHNR-TVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARR 178

Query: 597 NDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
              +V  L+  GA   + + K+ ++ L  A A ++  ++  +
Sbjct: 179 RR-LVAYLMKAGADPTIYN-KSERSALHQAAANRDFGMMVYM 218

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 54.2 bits (131), Expect = 6e-08
 Identities = 14/103 (13%), Positives = 28/103 (27%), Gaps = 12/103 (11%)

Query: 536 KNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFH 595
           +N E     + S      +L+  ++ GY +            N                +
Sbjct: 22  ENEEKNRKNHQSITSSQHSLLEASYDGYIKRQ---------RNELQHYSLYPNPQGYG-N 71

Query: 596 SNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
            ND +      +       +       L H EA  +  I + +
Sbjct: 72  GNDFLGDFNHTNLQIPTEPE-PESPIKL-HTEAAGSYAITEPI 112

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  159 bits (404), Expect = 3e-44
 Identities = 45/240 (18%), Positives = 95/240 (39%), Gaps = 24/240 (10%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           +    A+ DN +R V  LL+ G    N    +    L+ A      K+V +L+  G + +
Sbjct: 33  SASYYAIADNNVRLVCTLLNAGA-LKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDS 89

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKC-SMMVTP-ILAVSANMSEDSTDTN 175
             D+KG T L+ A   GN   VK  + K   +     +   T    AV  N         
Sbjct: 90  QFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLND-------V 142

Query: 176 EIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLF 235
            I+S  +    +  +       S +H  +   ++ ++ LL+     TN    +   P + 
Sbjct: 143 SIVSYFLSEIPSTFDL--AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIK 200

Query: 236 FAIESNSVKIVEAFLNSKNFDVSISDG-DLNSLLHKACHVGNLQIVQMLVKRKFDINAQN 294
            AI++  +++++  L             ++ S   +   + + +I +M++++  +  + +
Sbjct: 201 LAIDNKDIEMLQ-AL--------FKYDINIYSANLENVLLDDAEIAKMIIEKHVEYKSDS 251

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  156 bits (397), Expect = 3e-43
 Identities = 44/282 (15%), Positives = 102/282 (36%), Gaps = 26/282 (9%)

Query: 57  LTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANV 116
           + L     W +K  +++  LS    D  +    G +A Y AI     ++V  L++ GA  
Sbjct: 2   MDLSRINTWKSK--QLKSFLS--SKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALK 57

Query: 117 NDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNE 176
           N  +     PLH A  L +  IVK LL    D         T +     + +       +
Sbjct: 58  NLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNM------Q 109

Query: 177 IISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFF 236
            + + ++    +         +  + AV+  ++S+V   +         + +     +  
Sbjct: 110 TVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS-TFDLAILLSC-IHI 167

Query: 237 AIESNSVKIVEAFLNSKNFDVSISDGDLNS-LLHKACHVGNLQIVQMLVKRKFDINAQNR 295
            I++  V ++   L       + ++  L    +  A    +++++Q L K   +I + N 
Sbjct: 168 TIKNGHVDMMI-LLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL 226

Query: 296 YFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLL 337
                    + +      +A+ ++++  +         +L +
Sbjct: 227 E-------NVLLD--DAEIAKMIIEKH-VEYKSDSYTKDLDI 258

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  141 bits (359), Expect = 6e-38
 Identities = 51/320 (15%), Positives = 97/320 (30%), Gaps = 76/320 (23%)

Query: 90  GRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADV 149
           G     +       K +   +    +    D  G++  + A    N  +V  LL+  A  
Sbjct: 1   GMDLSRINT--WKSKQLKSFLS-SKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALK 57

Query: 150 RAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTD---FSPLHFAVVK 206
               +    P+   +           +I+ +L+ +G +  +     D    + L++AV  
Sbjct: 58  NLLENE--FPLHQAATLEDT------KIVKILLFSGLDDSQF----DDKGNTALYYAVDS 105

Query: 207 KNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNS 266
            N+  V+L +K         K   +   + A+  N V IV  FL+      +     L S
Sbjct: 106 GNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEI--PSTFDLAILLS 163

Query: 267 LLHKACHVGNLQIVQMLVKRKFDINAQNRY-FLPPMFFAIGMGRKHTHVAEYLLQQDSIN 325
            +H     G++ ++ +L+      N  N   F+P +  AI        + + L + D   
Sbjct: 164 CIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNK--DIEMLQALFKYDI-- 219

Query: 326 VNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFA 385
                                                       NI        +  L  
Sbjct: 220 --------------------------------------------NIY-------SANLEN 228

Query: 386 AKHCDLQSAKYLIQKGANVN 405
               D + AK +I+K     
Sbjct: 229 VLLDDAEIAKMIIEKHVEYK 248

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  127 bits (321), Expect = 9e-33
 Identities = 45/360 (12%), Positives = 104/360 (28%), Gaps = 99/360 (27%)

Query: 237 AIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
            I +   K +++FL+SK  D   +D   +S  + A    N+++V  L+      N     
Sbjct: 6   RINTWKSKQLKSFLSSK--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLENE 63

Query: 297 FLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKR 356
           F  P+  A  +    T + + LL                                     
Sbjct: 64  F--PLHQAATLE--DTKIVKILLFSGL--------------------------------- 86

Query: 357 LDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISD 416
                        + +   D   T L +A    ++Q+ K  ++K   +            
Sbjct: 87  -------------DDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLM----------- 122

Query: 417 ARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVK 476
                  ++++  +A    N++ +V   L       D +       + + I++G   ++ 
Sbjct: 123 FYGKTG-WKTSFYHAV-MLNDVSIVSYFLSEIPSTFDLAI--LLSCIHITIKNGHVDMMI 178

Query: 477 ELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKK 536
            L +Y    +  N L      ++A                         + +   + ++ 
Sbjct: 179 LLLDYMTSTNTNNSLLFIPDIKLA-------------------------IDNKDIEMLQA 213

Query: 537 NIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHS 596
             +    +        SA +        EI  ++++   +    S T    +    +   
Sbjct: 214 LFKYDINIY-------SANLENVLLDDAEIAKMIIEKHVEYKSDSYTKDLDIVKNNKLDE 266

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  116 bits (293), Expect = 4e-29
 Identities = 39/289 (13%), Positives = 77/289 (26%), Gaps = 73/289 (25%)

Query: 370 NINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQ 429
           +         +   +A    +++    L+  GA  NL E +                 L 
Sbjct: 23  DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLENE---------------FPLH 67

Query: 430 YACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
            A     + ++VK+LL  G D +   +K     L  A+ SG+ Q VK       ++    
Sbjct: 68  QAATL-EDTKIVKILLFSGLDDSQFDDK-GNTALYYAVDSGNMQTVKLFVKKNWRLMF-- 123

Query: 490 YLKNKEAARIA-HSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSS 548
               K   + + +                        V  N    V   + +        
Sbjct: 124 --YGKTGWKTSFYHA----------------------VMLNDVSIVSYFLSEIP-STFDL 158

Query: 549 ERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT-ALHMACR-------------- 593
               S +      G+ +++ LLLD     N  ++  F   + +A                
Sbjct: 159 AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYD 218

Query: 594 -----------FHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKN 631
                         +  I + ++     Y      T    +       +
Sbjct: 219 INIYSANLENVLLDDAEIAKMIIEKHVEYKSDS-YTKDLDI-VKNNKLD 265

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  107 bits (271), Expect = 4e-26
 Identities = 35/328 (10%), Positives = 91/328 (27%), Gaps = 107/328 (32%)

Query: 175 NEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLL 234
           ++ +   + +  +  +       S  ++A+   N+ +V  L+   A  N           
Sbjct: 12  SKQLKSFL-SSKDTFKADVH-GHSASYYAIADNNVRLVCTLLNAGALKN----------- 58

Query: 235 FFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQN 294
                                   + + +    LH+A  + + +IV++L+    D +  +
Sbjct: 59  ------------------------LLENE--FPLHQAATLEDTKIVKILLFSGLDDSQFD 92

Query: 295 RYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQI 354
                 +++A+  G  +    +  ++++                                
Sbjct: 93  DKGNTALYYAVDSG--NMQTVKLFVKKNW------------------------------- 119

Query: 355 KRLDQIIKRIIDRTENINAEGDD-MITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAF 413
                           +   G     T    A    D+    Y + +  +          
Sbjct: 120 ---------------RLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF-------- 156

Query: 414 ISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQ 473
                       S +        +++M+ LLL +    N  ++      + +AI + D +
Sbjct: 157 ------DLAILLSCIHITI-KNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIE 209

Query: 474 IVKELQNYGAQIDKENYLKNKEAARIAH 501
           +++ L  Y   I       N E   +  
Sbjct: 210 MLQALFKYDINIYS----ANLENVLLDD 233

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  105 bits (265), Expect = 2e-25
 Identities = 40/257 (15%), Positives = 69/257 (26%), Gaps = 51/257 (19%)

Query: 385 AAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLL 444
                  +  K  +    +                +D    SA  YA    NN+ +V  L
Sbjct: 6   RINTWKSKQLKSFLS-SKDTF-------------KADVHGHSASYYAI-ADNNVRLVCTL 50

Query: 445 LLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAA-RIAHST 503
           L  GA  N   N+    PL  A    D +IVK L   G    + +       A   A   
Sbjct: 51  LNAGALKNLLENEF---PLHQAATLEDTKIVKILLFSGLDDSQFD--DKGNTALYYA--- 102

Query: 504 TELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSER-RGSALIYVAWKG 562
                                 V S     VK  ++    +    +    ++  +     
Sbjct: 103 ----------------------VDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLN 140

Query: 563 YEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTP 622
              IV   L          A   + +H+  +    D ++  LL +    +  +      P
Sbjct: 141 DVSIVSYFLSEIPSTF-DLAILLSCIHITIKNGHVD-MMILLLDYMTSTNTNN-SLLFIP 197

Query: 623 LKHAEAGKNR-DIIDLL 638
                      +++  L
Sbjct: 198 DIKLAIDNKDIEMLQAL 214

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 77.2 bits (191), Expect = 1e-15
 Identities = 27/116 (23%), Positives = 39/116 (33%), Gaps = 5/116 (4%)

Query: 523 LKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSA 582
           L  + + K  ++K  +        +     SA  Y        +V  LL+ GA  N    
Sbjct: 4   LSRINTWKSKQLKSFLS-SKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL-- 60

Query: 583 TGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
                LH A     +  IV+ LL  G      D   G T L +A    N   + L 
Sbjct: 61  ENEFPLHQAA-TLEDTKIVKILLFSGLDDSQFD-DKGNTALYYAVDSGNMQTVKLF 114

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  156 bits (397), Expect = 1e-43
 Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 16/243 (6%)

Query: 82  DVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKF 141
           +   + Q+ R+ L+ A   G   +  +L+  GAN++   E   TPL  A    +   VK+
Sbjct: 3   NFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKY 62

Query: 142 LLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGA---NVREKMPFTDFS 198
           L+   A V  K +   T +   +           E++  L+ NG    N ++   +T   
Sbjct: 63  LIKAGALVDPKDAEGSTCLHLAAKKGHY------EVVQYLLSNGQMDVNCQDDGGWT--- 113

Query: 199 PLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVS 258
           P+ +A   K++ +V+LL+   +D N+         L +A  S  V I E  L +   D+ 
Sbjct: 114 PMIWATEYKHVDLVKLLLSKGSDINIRDNEENIC-LHWAAFSGCVDIAE-ILLAAKCDLH 171

Query: 259 ISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYL 318
             +   +S LH A        V + + R  D+  +N+    P+  A          A  +
Sbjct: 172 AVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNS--QVWSALQM 229

Query: 319 LQQ 321
            + 
Sbjct: 230 SKA 232

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  136 bits (344), Expect = 2e-36
 Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 13/168 (7%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           T L  A        V++LLS G  DVN +   G T +  A       +V LL+  G+++N
Sbjct: 79  TCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDIN 138

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEI 177
            RD +    LH A + G  +I + LL+ K D+ A      +P+   +           + 
Sbjct: 139 IRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRY------DC 192

Query: 178 ISMLIENGANVREKMPFTD---FSPLHFAVVKKNLSVVELLIKCKADT 222
           + + +   ++V  K    +    +PL  A +   +     + K   D+
Sbjct: 193 VVLFLSRDSDVTLK----NKEGETPLQCASLNSQVWSALQMSKALQDS 236

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  134 bits (340), Expect = 8e-36
 Identities = 58/284 (20%), Positives = 108/284 (38%), Gaps = 60/284 (21%)

Query: 370 NINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQ 429
           N   E  +  +PL  AA+   +     L+Q GAN++             +     R+ L 
Sbjct: 3   NFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANID-------------TCSEDQRTPLM 49

Query: 430 YACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQ-IDKE 488
            A ++ N++E VK L+  GA V+    +     L +A + G +++V+ L + G   ++  
Sbjct: 50  EAAEN-NHLEAVKYLIKAGALVDPKDAE-GSTCLHLAAKKGHYEVVQYLLSNGQMDVNC- 106

Query: 489 NYLKNKE-------AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDG 541
              ++         A    H          +  LL                     +  G
Sbjct: 107 ---QDDGGWTPMIWATEYKH--------VDLVKLL---------------------LSKG 134

Query: 542 ACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIV 601
           + +N+        L + A+ G  +I ++LL    D++  +  G + LH+A R +  D  V
Sbjct: 135 SDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYD-CV 193

Query: 602 RKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL--HLIDN 643
              L   +   +K+ K G+TPL+ A           +   L D+
Sbjct: 194 VLFLSRDSDVTLKN-KEGETPLQCASLNSQVWSALQMSKALQDS 236

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  130 bits (330), Expect = 2e-34
 Identities = 61/291 (20%), Positives = 103/291 (35%), Gaps = 58/291 (19%)

Query: 114 ANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTD 173
            N     +   +PLH A   G+ +I   L+   A++        TP++  + N       
Sbjct: 2   MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHL---- 57

Query: 174 TNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKA-DTNLIVKVNQEP 232
             E +  LI+ GA V  K      + LH A  K +  VV+ L+     D N        P
Sbjct: 58  --EAVKYLIKAGALVDPKDAE-GSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTP 114

Query: 233 LLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINA 292
            + +A E   V +V+  L SK  D++I D + N  LH A   G + I ++L+  K D++A
Sbjct: 115 -MIWATEYKHVDLVK-LLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHA 172

Query: 293 QNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQT 352
            N +   P+  A              L +DS                             
Sbjct: 173 VNIHGDSPLHIAAREN--RYDCVVLFLSRDS----------------------------- 201

Query: 353 QIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGAN 403
                            ++  +  +  TPL  A+ +  + SA  + +   +
Sbjct: 202 -----------------DVTLKNKEGETPLQCASLNSQVWSALQMSKALQD 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  119 bits (300), Expect = 2e-30
 Identities = 51/252 (20%), Positives = 89/252 (35%), Gaps = 43/252 (17%)

Query: 359 QIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDAR 418
            I   ++    NI+   +D  TPL+ AA++  L++ KYLI+ GA V+             
Sbjct: 25  DICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVD------------- 71

Query: 419 SSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKEL 478
             D    + L  A K K + E+V+ LL +G    +  +     P+  A +     +VK L
Sbjct: 72  PKDAEGSTCLHLAAK-KGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLL 130

Query: 479 QNYGAQIDKENYLKNKEAA-RIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKN 537
            + G+ I+  +    +      A                           S   D  +  
Sbjct: 131 LSKGSDINIRD--NEENICLHWA-------------------------AFSGCVDIAEIL 163

Query: 538 IEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSN 597
           +     ++  +    S L   A +   + V L L   +DV  K+  G T L  A   +S 
Sbjct: 164 LAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASL-NSQ 222

Query: 598 DNIVRKLLHHGA 609
                ++     
Sbjct: 223 VWSALQMSKALQ 234

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  103 bits (260), Expect = 4e-25
 Identities = 53/325 (16%), Positives = 103/325 (31%), Gaps = 92/325 (28%)

Query: 254 NFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTH 313
           + +  +   +  S LH A   G++ I  MLV+   +I+  +     P+  A      H  
Sbjct: 1   HMNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENN--HLE 58

Query: 314 VAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINA 373
             +YL++  +                                               ++ 
Sbjct: 59  AVKYLIKAGA----------------------------------------------LVDP 72

Query: 374 EGDDMITPLLFAAKHCDLQSAKYLIQKGA-NVNLTETQKAFISDARSSDFCFRSALQYAC 432
           +  +  T L  AAK    +  +YL+  G  +VN               D    + + +A 
Sbjct: 73  KDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVN-------------CQDDGGWTPMIWAT 119

Query: 433 KHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLK 492
           ++  ++++VKLLL  G+D+N   N+ +   L  A  SG   I + L      +   N   
Sbjct: 120 EY-KHVDLVKLLLSKGSDINIRDNE-ENICLHWAAFSGCVDIAEILLAAKCDLHAVN--I 175

Query: 493 NKEAA-RIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERR 551
           + ++   IA                          R N+YD V   +   + V + ++  
Sbjct: 176 HGDSPLHIA-------------------------ARENRYDCVVLFLSRDSDVTLKNKEG 210

Query: 552 GSALIYVAWKGYEEIVDLLLDNGAD 576
            + L   +          +     D
Sbjct: 211 ETPLQCASLNSQVWSALQMSKALQD 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  101 bits (255), Expect = 2e-24
 Identities = 41/256 (16%), Positives = 86/256 (33%), Gaps = 63/256 (24%)

Query: 234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQ 293
           L  A E+  V I    L     ++     D  + L +A    +L+ V+ L+K    ++ +
Sbjct: 15  LHAAAEAGHVDICH-MLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPK 73

Query: 294 NRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQ 353
           +      +  A   G  H  V +YLL    ++                            
Sbjct: 74  DAEGSTCLHLAAKKG--HYEVVQYLLSNGQMD---------------------------- 103

Query: 354 IKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAF 413
                            +N + D   TP+++A ++  +   K L+ KG+++N        
Sbjct: 104 -----------------VNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDIN-------- 138

Query: 414 ISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQ 473
                  D      L +A      +++ ++LL    D++  +      PL +A +   + 
Sbjct: 139 -----IRDNEENICLHWAAFS-GCVDIAEILLAAKCDLHAVNIH-GDSPLHIAARENRYD 191

Query: 474 IVKELQNYGAQIDKEN 489
            V    +  + +  +N
Sbjct: 192 CVVLFLSRDSDVTLKN 207

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 49.7 bits (120), Expect = 9e-07
 Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 575 ADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDI 634
            +   +     + LH A      D I   L+  GA  D    +  +TPL  A    + + 
Sbjct: 2   MNFKMEHQNKRSPLHAAAEAGHVD-ICHMLVQAGANIDTCS-EDQRTPLMEAAENNHLEA 59

Query: 635 IDLL 638
           +  L
Sbjct: 60  VKYL 63

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  156 bits (396), Expect = 2e-43
 Identities = 52/243 (21%), Positives = 100/243 (41%), Gaps = 18/243 (7%)

Query: 83  VNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFL 142
           +          +  A   G+Y+    L+  G +V   D++  T LH A      ++VK+ 
Sbjct: 2   MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYY 61

Query: 143 LSKKADVRAKCS-MMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTD---FS 198
           +SK A V      +  TP+   +            ++  L++ GA+        D    S
Sbjct: 62  ISKGAIVDQLGGDLNSTPLHWATRQGHL------SMVVQLMKYGADPSLI----DGEGCS 111

Query: 199 PLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVS 258
            +H A    + S+V  LI    D +++ +    PL++ A  ++SV      L + N  V+
Sbjct: 112 CIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTR-LLLTFNVSVN 170

Query: 259 ISD-GDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEY 317
           + D    N+ LH A   GN  ++ +L++   +++AQN      +  A      +  +  +
Sbjct: 171 LGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRK--NVWMINH 228

Query: 318 LLQ 320
           L +
Sbjct: 229 LQE 231

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  149 bits (380), Expect = 3e-41
 Identities = 48/242 (19%), Positives = 88/242 (36%), Gaps = 17/242 (7%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
             +  A           L+  G  DV +  ++  T L+ A +     +V   I  GA V+
Sbjct: 11  WDIVKATQYGIYERCRELVEAGY-DVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVD 69

Query: 118 DRD-EKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNE 176
               +   TPLH A   G+ ++V  L+   AD         + I   +            
Sbjct: 70  QLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHT------S 123

Query: 177 IISMLIENGANVREKMPFTD---FSPLHFAVVKKN-LSVVELLIKCKADTNLIVKVNQEP 232
           I++ LI  G +V       D    +PL +A  + + +    LL+      NL  K ++  
Sbjct: 124 IVAYLIAKGQDVDMM----DQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNT 179

Query: 233 LLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINA 292
            L +A+ + +  ++   L     +V   +    S L  A    N+ ++  L + +     
Sbjct: 180 ALHWAVLAGNTTVIS-LLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKGY 238

Query: 293 QN 294
            N
Sbjct: 239 DN 240

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  142 bits (362), Expect = 7e-39
 Identities = 58/278 (20%), Positives = 99/278 (35%), Gaps = 58/278 (20%)

Query: 370 NINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQ 429
           ++    D     ++ A ++   +  + L++ G +V                D    + L 
Sbjct: 1   HMTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVR-------------QPDKENVTLLH 47

Query: 430 YACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
           +A    N I++VK  +  GA V+         PL  A + G   +V +L  YGA      
Sbjct: 48  WAA-INNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSL-- 104

Query: 490 YLKNKE-------AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGA 542
              + E       AA+  H          I   L                     I  G 
Sbjct: 105 --IDGEGCSCIHLAAQFGH--------TSIVAYL---------------------IAKGQ 133

Query: 543 CVNVSSERRGSALIYVAWKGYE-EIVDLLLDNGADVNFK-SATGFTALHMACRFHSNDNI 600
            V++  +   + L++ A++ +  +   LLL     VN        TALH A     N  +
Sbjct: 134 DVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVL-AGNTTV 192

Query: 601 VRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
           +  LL  GA  D ++   G++ L  A+  KN  +I+ L
Sbjct: 193 ISLLLEAGANVDAQN-IKGESALDLAKQRKNVWMINHL 229

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  133 bits (338), Expect = 1e-35
 Identities = 51/293 (17%), Positives = 102/293 (34%), Gaps = 58/293 (19%)

Query: 115 NVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDT 174
           ++   D+     +  A   G     + L+    DVR      VT +   + N        
Sbjct: 1   HMTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRI----- 55

Query: 175 NEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLL 234
            +++   I  GA V +     + +PLH+A  + +LS+V  L+K  AD +LI        +
Sbjct: 56  -DLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSC-I 113

Query: 235 FFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGN-LQIVQMLVKRKFDINAQ 293
             A +     IV  +L +K  DV + D +  + L  A +  + +   ++L+     +N  
Sbjct: 114 HLAAQFGHTSIVA-YLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLG 172

Query: 294 NRYF-LPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQT 352
           ++Y     + +A+  G  +T V   LL+  +                             
Sbjct: 173 DKYHKNTALHWAVLAG--NTTVISLLLEAGA----------------------------- 201

Query: 353 QIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVN 405
                            N++A+     + L  A +  ++    +L +      
Sbjct: 202 -----------------NVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKG 237

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  126 bits (320), Expect = 3e-33
 Identities = 51/257 (19%), Positives = 97/257 (37%), Gaps = 51/257 (19%)

Query: 359 QIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDAR 418
           +  + +++   ++     + +T L +AA +  +   KY I KGA V+             
Sbjct: 23  ERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVD-----------QL 71

Query: 419 SSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKEL 478
             D    + L +A + + ++ MV  L+ +GAD +    +     + +A Q G   IV  L
Sbjct: 72  GGDL-NSTPLHWATR-QGHLSMVVQLMKYGADPSLIDGE-GCSCIHLAAQFGHTSIVAYL 128

Query: 479 QNYGAQIDKENYLKNKE-----AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDE 533
              G  +D  +  +N       AA   HS            LL                 
Sbjct: 129 IAKGQDVDMMD--QNGMTPLMWAAYRTHS-------VDPTRLL----------------- 162

Query: 534 VKKNIEDGACVNVSSERRGS-ALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMAC 592
               +     VN+  +   + AL +    G   ++ LLL+ GA+V+ ++  G +AL +A 
Sbjct: 163 ----LTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAK 218

Query: 593 RFHSNDNIVRKLLHHGA 609
           +  +   ++  L     
Sbjct: 219 QRKNVW-MINHLQEARQ 234

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  105 bits (264), Expect = 1e-25
 Identities = 39/257 (15%), Positives = 81/257 (31%), Gaps = 63/257 (24%)

Query: 234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQ 293
           +  A +    +     +    +DV   D +  +LLH A     + +V+  + +   ++  
Sbjct: 13  IVKATQYGIYERCRELV-EAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQL 71

Query: 294 NRYF-LPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQT 352
                  P+ +A   G  H  +   L++  +                             
Sbjct: 72  GGDLNSTPLHWATRQG--HLSMVVQLMKYGA----------------------------- 100

Query: 353 QIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKA 412
                            + +    +  + +  AA+        YLI KG +V+       
Sbjct: 101 -----------------DPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVD------- 136

Query: 413 FISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDF 472
                   D    + L +A    ++++  +LLL     VN      K   L  A+ +G+ 
Sbjct: 137 ------MMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNT 190

Query: 473 QIVKELQNYGAQIDKEN 489
            ++  L   GA +D +N
Sbjct: 191 TVISLLLEAGANVDAQN 207

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  104 bits (262), Expect = 2e-25
 Identities = 42/316 (13%), Positives = 92/316 (29%), Gaps = 92/316 (29%)

Query: 268 LHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVN 327
           + KA   G  +  + LV+  +D+   ++  +  + +A         + +Y + + +    
Sbjct: 13  IVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINN--RIDLVKYYISKGA---- 66

Query: 328 LPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDM-ITPLLFAA 386
                                                      ++  G D+  TPL +A 
Sbjct: 67  ------------------------------------------IVDQLGGDLNSTPLHWAT 84

Query: 387 KHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLL 446
           +   L     L++ GA+ +L + +               S +  A +   +  +V  L+ 
Sbjct: 85  RQGHLSMVVQLMKYGADPSLIDGEG-------------CSCIHLAAQ-FGHTSIVAYLIA 130

Query: 447 HGADVNDTSNKPKQKPLAVAIQSG-DFQIVKELQNYGAQIDKENYLKNKEAARIA-HSTT 504
            G DV+         PL  A          + L  +   ++      +K     A H   
Sbjct: 131 KGQDVDMMDQN-GMTPLMWAAYRTHSVDPTRLLLTFNVSVNL----GDKYHKNTALHWA- 184

Query: 505 ELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYE 564
                                V +     +   +E GA V+  + +  SAL     +   
Sbjct: 185 ---------------------VLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNV 223

Query: 565 EIVDLLLDNGADVNFK 580
            +++ L +      + 
Sbjct: 224 WMINHLQEARQAKGYD 239

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  157 bits (400), Expect = 2e-43
 Identities = 55/379 (14%), Positives = 110/379 (29%), Gaps = 86/379 (22%)

Query: 83  VNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFL 142
           +       +    +    G    +   +        + + G      AC  G+   V  L
Sbjct: 1   MKMADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDG-AVFLAACSSGDTEEVLRL 59

Query: 143 LSKKADVRAKCSMMVTP-ILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTD---FS 198
           L + AD+       +T    A   +         +++  L+ENGAN+ +     D   + 
Sbjct: 60  LERGADINYANVDGLTALHQACIDD-------NVDMVKFLVENGANINQP----DNEGWI 108

Query: 199 PLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVS 258
           PLH A     L + E LI   A    +      P L  A E    ++++  +N +  D+ 
Sbjct: 109 PLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTP-LDIAEEEAMEELLQNEVNRQGVDI- 166

Query: 259 ISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYL 318
                  +   +   +      Q L     +     +     +  A   G  +T V + L
Sbjct: 167 ------EAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKG--YTEVLKLL 218

Query: 319 LQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDM 378
           +Q                                                 ++N +  D 
Sbjct: 219 IQARY----------------------------------------------DVNIKDYDG 232

Query: 379 ITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNI 438
            TPL  AA     ++ + L++   ++            A +     ++A   A +     
Sbjct: 233 WTPLHAAAHWGKEEACRILVENLCDME-----------AVNKV--GQTAFDVADE-DILG 278

Query: 439 EMVKLLLLHGADVNDTSNK 457
            + +L        ++   K
Sbjct: 279 YLEELQKKQNLLHSEKREK 297

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  151 bits (384), Expect = 3e-41
 Identities = 56/357 (15%), Positives = 112/357 (31%), Gaps = 71/357 (19%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
                  W     ++E  +         K  DG   L  A   G  + V  L+  GA++N
Sbjct: 10  RNEQLKRWIGSETDLEPPVVKRK-KTKVKFDDGAVFLA-ACSSGDTEEVLRLLERGADIN 67

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEI 177
             +  G T LH AC   N ++VKFL+   A++    +    P+ A ++          +I
Sbjct: 68  YANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYL------DI 121

Query: 178 ISMLIENGANVREKMPFTD---FSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLL 234
              LI  GA+V       +    +PL  A  +    +++  +  +        V+ E   
Sbjct: 122 AEYLISQGAHVGAV----NSEGDTPLDIAEEEAMEELLQNEVNRQ-------GVDIEAAR 170

Query: 235 FFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQN 294
                       + +LNS + +         + LH A   G  +++++L++ ++D+N ++
Sbjct: 171 KEEERIMLRDARQ-WLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKD 229

Query: 295 RYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQI 354
                P+  A   G         L++                                  
Sbjct: 230 YDGWTPLHAAAHWG--KEEACRILVENLC------------------------------- 256

Query: 355 KRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQK 411
                          ++ A      T    A +       +   ++    +    +K
Sbjct: 257 ---------------DMEAVNKVGQTAFDVADEDILGYLEELQKKQNLLHSEKREKK 298

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  143 bits (363), Expect = 3e-38
 Identities = 68/309 (22%), Positives = 122/309 (39%), Gaps = 34/309 (11%)

Query: 341 MSLKDPKVMSQTQIKRL---DQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYL 397
           M + D K     Q+KR    +  ++  + + +    + DD     L A    D +    L
Sbjct: 1   MKMADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDG-AVFLAACSSGDTEEVLRL 59

Query: 398 IQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNK 457
           +++GA++N              ++    +AL  AC   +N++MVK L+ +GA++N   N+
Sbjct: 60  LERGADIN-------------YANVDGLTALHQAC-IDDNVDMVKFLVENGANINQPDNE 105

Query: 458 PKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE-----AARIAH-STTELEERKK 511
               PL  A   G   I + L + GA +   N     +     A   A     + E  ++
Sbjct: 106 -GWIPLHAAASCGYLDIAEYLISQGAHVGAVN--SEGDTPLDIAEEEAMEELLQNEVNRQ 162

Query: 512 INDLLKLNLDFLKNVRSNKYDEVKKN-IEDGACVNVSSERRGSALIYVAWKGYEEIVDLL 570
             D+        K        + ++            ++  G+AL   A KGY E++ LL
Sbjct: 163 GVDIEAA----RKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLL 218

Query: 571 LDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGK 630
           +    DVN K   G+T LH A  +   +   R L+ +    +  + K G+T    A+   
Sbjct: 219 IQARYDVNIKDYDGWTPLHAAAHWGKEE-ACRILVENLCDMEAVN-KVGQTAFDVADEDI 276

Query: 631 NRDIIDLLH 639
              + +L  
Sbjct: 277 LGYLEELQK 285

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  121 bits (307), Expect = 8e-31
 Identities = 51/385 (13%), Positives = 108/385 (28%), Gaps = 110/385 (28%)

Query: 259 ISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYL 318
           ++D            +G+   ++  V ++     +       +          T     L
Sbjct: 3   MADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACS---SGDTEEVLRL 59

Query: 319 LQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDM 378
           L++ +                                              +IN    D 
Sbjct: 60  LERGA----------------------------------------------DINYANVDG 73

Query: 379 ITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNI 438
           +T L  A    ++   K+L++ GAN+N              ++      L  A      +
Sbjct: 74  LTALHQACIDDNVDMVKFLVENGANIN-----------QPDNEG--WIPLHAAAS-CGYL 119

Query: 439 EMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAAR 498
           ++ + L+  GA V   +++    PL +A +    ++++   N            + EAAR
Sbjct: 120 DIAEYLISQGAHVGAVNSE-GDTPLDIAEEEAMEELLQNEVNRQG--------VDIEAAR 170

Query: 499 IAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKN--------------------- 537
                              +  D  + + S   ++V+                       
Sbjct: 171 KEEER-------------IMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKL 217

Query: 538 -IEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHS 596
            I+    VN+      + L   A  G EE   +L++N  D+   +  G TA  +A     
Sbjct: 218 LIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDIL 277

Query: 597 NDNIVRKLLHHGAYYDMKDGKTGKT 621
              +              + +  K+
Sbjct: 278 GY-LEELQKKQNL--LHSEKREKKS 299

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  156 bits (397), Expect = 4e-43
 Identities = 54/261 (20%), Positives = 103/261 (39%), Gaps = 21/261 (8%)

Query: 71  EVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLA 130
                L +     +       + ++ A + G    +  LI  G  VN       +PLH A
Sbjct: 42  FPGIRLLSNPLMGDAV--SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEA 99

Query: 131 CYLGNKNIVKFLLSKKADVRAKCSMMVTP-ILAVSANMSEDSTDTNEIISMLIENGANVR 189
           C  G+ + VK LL   A V    +   TP   A  +          + +++L+++GA+V+
Sbjct: 100 CLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSW-------DCVNLLLQHGASVQ 152

Query: 190 EKMPFTD-FSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEA 248
            +   +D  SP+H A  + ++  V  LI    + +  +     P L+ A E+     V+ 
Sbjct: 153 PE---SDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTP-LYLACENQQRACVK- 207

Query: 249 FLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMG 308
            L     DV+      +S LH      + ++  +L+    D  A+N     P+       
Sbjct: 208 KLLESGADVNQGK-GQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPES 266

Query: 309 RKHTHVAEYLLQQDSINVNLP 329
                +A+  L+++  ++  P
Sbjct: 267 ----PLAQLFLEREGASLPKP 283

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  149 bits (379), Expect = 1e-40
 Identities = 65/429 (15%), Positives = 120/429 (27%), Gaps = 152/429 (35%)

Query: 63  AVWDNKIREVEFLLSTG----DHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVND 118
               +       L+  G      D  +   DG          G+      L+ +    + 
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGI-----RLLSNPLMGDA 56

Query: 119 RDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEII 178
                ++P+H A   G++  ++ L+S+   V                    +    + + 
Sbjct: 57  VS--DWSPMHEAAIHGHQLSLRNLISQGWAV--------------------NIITADHV- 93

Query: 179 SMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAI 238
                              SPLH A +  +LS V++L+K  A  N               
Sbjct: 94  -------------------SPLHEACLGGHLSCVKILLKHGAQVN--------------- 119

Query: 239 ESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFL 298
                                   D ++ L  AC  G+   V +L++    +  ++    
Sbjct: 120 --------------------GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLA- 158

Query: 299 PPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLD 358
            P+  A   G  H      L+                                       
Sbjct: 159 SPIHEAARRG--HVECVNSLIAYGG----------------------------------- 181

Query: 359 QIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDAR 418
                      NI+ +   + TPL  A ++      K L++ GA+VN  + Q        
Sbjct: 182 -----------NIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQ-------- 222

Query: 419 SSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKEL 478
                  S L    +   + E+  LL+  GAD     N   ++P+ +         +  L
Sbjct: 223 ------DSPLHAVVRT-ASEELACLLMDFGADTQ-AKNAEGKRPVELVPPESPLAQLF-L 273

Query: 479 QNYGAQIDK 487
           +  GA + K
Sbjct: 274 EREGASLPK 282

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  139 bits (354), Expect = 3e-37
 Identities = 69/331 (20%), Positives = 112/331 (33%), Gaps = 67/331 (20%)

Query: 311 HTHVAEYLLQQDSINVNLP-IKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTE 369
           H H +  L+ +   ++     K+  +        +D                  I   + 
Sbjct: 7   HHHHSSGLVPR-GSHMASMDGKQGGMDGSKPAGPRD---------------FPGIRLLSN 50

Query: 370 NINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQ 429
            +  +     +P+  AA H    S + LI +G  VN+                   S L 
Sbjct: 51  PLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADH-------------VSPLH 97

Query: 430 YACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
            AC    ++  VK+LL HGA VN  +      PL  A  SG +  V  L  +GA +  E+
Sbjct: 98  EAC-LGGHLSCVKILLKHGAQVNGVTAD-WHTPLFNACVSGSWDCVNLLLQHGASVQPES 155

Query: 490 YLKNK--EAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVS 547
            L +   EAAR  H         +  + L                     I  G  ++  
Sbjct: 156 DLASPIHEAARRGH--------VECVNSL---------------------IAYGGNIDHK 186

Query: 548 SERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHH 607
               G+ L           V  LL++GADVN +     + LH   R  +++ +   L+  
Sbjct: 187 ISHLGTPLYLACENQQRACVKKLLESGADVN-QGKGQDSPLHAVVR-TASEELACLLMDF 244

Query: 608 GAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
           GA    K+   GK P+      ++      L
Sbjct: 245 GADTQAKN-AEGKRPV-ELVPPESPLAQLFL 273

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  127 bits (323), Expect = 4e-33
 Identities = 64/343 (18%), Positives = 103/343 (30%), Gaps = 70/343 (20%)

Query: 271 ACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPI 330
                +      LV R   + + +                        L  + +  +   
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSK---PAGPRDFPGIRLLSNPLMGDA-- 56

Query: 331 KRPNLLLDTVMSLKDPK--VMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKH 388
                              +            ++ +I +   +N    D ++PL  A   
Sbjct: 57  -------------VSDWSPMHEAAIHGHQL-SLRNLISQGWAVNIITADHVSPLHEACLG 102

Query: 389 CDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHG 448
             L   K L++ GA VN                  + + L  AC    + + V LLL HG
Sbjct: 103 GHLSCVKILLKHGAQVN-------------GVTADWHTPLFNACV-SGSWDCVNLLLQHG 148

Query: 449 ADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAA-RIAHSTTELE 507
           A V   S+     P+  A + G  + V  L  YG  ID +    +      +A       
Sbjct: 149 ASVQPESD--LASPIHEAARRGHVECVNSLIAYGGNIDHKI--SHLGTPLYLA------- 197

Query: 508 ERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIV 567
                               + +   VKK +E GA VN    +  S L  V     EE+ 
Sbjct: 198 ------------------CENQQRACVKKLLESGADVNQGKGQD-SPLHAVVRTASEELA 238

Query: 568 DLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLL-HHGA 609
            LL+D GAD   K+A G   + +         + +  L   GA
Sbjct: 239 CLLMDFGADTQAKNAEGKRPVELVPP---ESPLAQLFLEREGA 278

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  123 bits (312), Expect = 1e-31
 Identities = 56/283 (19%), Positives = 96/283 (33%), Gaps = 72/283 (25%)

Query: 385 AAKHCDLQSAKYLIQKGANVN----------------------LTETQKAFISDARSSDF 422
            + H     +  L+ +G+++                       +       + DA S   
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSD-- 59

Query: 423 CFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYG 482
              S +  A  H  +   ++ L+  G  VN  +      PL  A   G    VK L  +G
Sbjct: 60  --WSPMHEAAIH-GHQLSLRNLISQGWAVNIITAD-HVSPLHEACLGGHLSCVKILLKHG 115

Query: 483 AQIDKENYLKNKE-------AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVK 535
           AQ++        +       A                               S  +D V 
Sbjct: 116 AQVNG----VTADWHTPLFNACV-----------------------------SGSWDCVN 142

Query: 536 KNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFH 595
             ++ GA V   S+   S +   A +G+ E V+ L+  G +++ K +   T L++AC   
Sbjct: 143 LLLQHGASVQPESDLA-SPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQ 201

Query: 596 SNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
                V+KLL  GA  D+  GK   +PL       + ++  LL
Sbjct: 202 QRA-CVKKLLESGA--DVNQGKGQDSPLHAVVRTASEELACLL 241

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  123 bits (311), Expect = 2e-31
 Identities = 50/378 (13%), Positives = 105/378 (27%), Gaps = 100/378 (26%)

Query: 203 AVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDG 262
                +      L+   +         ++  +  +  +         L S          
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMA--SMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSD 59

Query: 263 DLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQD 322
              S +H+A   G+   ++ L+ + + +N      + P+  A   G  H    + LL+  
Sbjct: 60  --WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGG--HLSCVKILLKHG 115

Query: 323 SINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPL 382
           +                                               +N    D  TPL
Sbjct: 116 A----------------------------------------------QVNGVTADWHTPL 129

Query: 383 LFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVK 442
             A           L+Q GA+V                +    S +  A + + ++E V 
Sbjct: 130 FNACVSGSWDCVNLLLQHGASVQ--------------PESDLASPIHEAAR-RGHVECVN 174

Query: 443 LLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKN--KEAARIA 500
            L+ +G +++   +     PL +A ++     VK+L   GA +++     +      R A
Sbjct: 175 SLIAYGGNIDHKISH-LGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVVRTA 233

Query: 501 HSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAW 560
                    +++  LL                     ++ GA     +      +  V  
Sbjct: 234 S--------EELACLL---------------------MDFGADTQAKNAEGKRPVELVPP 264

Query: 561 KGYEEIVDLLLDNGADVN 578
           +     +  L   GA + 
Sbjct: 265 ESPLAQL-FLEREGASLP 281

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  100 bits (252), Expect = 1e-23
 Identities = 30/142 (21%), Positives = 57/142 (40%), Gaps = 9/142 (6%)

Query: 52  AKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIH 111
            +S   + +  A     +  V  L++ G  +++ K+    T LY+A        V  L+ 
Sbjct: 153 PESDLASPIHEAARRGHVECVNSLIAYG-GNIDHKISHLGTPLYLACENQQRACVKKLLE 211

Query: 112 HGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDS 171
            GA+VN + +   +PLH      ++ +   L+   AD +AK +    P+  V        
Sbjct: 212 SGADVN-QGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPE----- 265

Query: 172 TDTNEIISMLIENGANVREKMP 193
             +      L   GA++ +  P
Sbjct: 266 --SPLAQLFLEREGASLPKPKP 285

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  147 bits (375), Expect = 1e-40
 Identities = 52/248 (20%), Positives = 94/248 (37%), Gaps = 16/248 (6%)

Query: 51  SAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLI 110
           S     L    S   ++    +   +  G    N+  + G TAL++A           L+
Sbjct: 18  SCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLL 77

Query: 111 HHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKA-DVRAKCSMMVTPILAVSANMSE 169
              A+ N +D  G TPLH A     + + + L+  +A D+ A+     TP++  +    E
Sbjct: 78  EASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVE 137

Query: 170 DSTDTNEIISMLIENGANVREKMPFTD---FSPLHFAVVKKNLSVVELLIKCKADTNLIV 226
                  ++  LI + A+V       D    S LH+A    N+    +L+K  A+ ++  
Sbjct: 138 ------GMLEDLINSHADVNAV----DDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQN 187

Query: 227 KVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKR 286
              + P LF A    S +  +  L     +  I+D         A    +  IV++L   
Sbjct: 188 NREETP-LFLAAREGSYETAK-VLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLE 245

Query: 287 KFDINAQN 294
               +  +
Sbjct: 246 HHHHHHHH 253

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  136 bits (346), Expect = 2e-36
 Identities = 57/339 (16%), Positives = 112/339 (33%), Gaps = 89/339 (26%)

Query: 115 NVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDT 174
           +VN R   G+TPL +A   G          ++                          D 
Sbjct: 2   DVNVRGPDGFTPLMIASCSGGGLETGNSEEEE--------------------------DA 35

Query: 175 NEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLL 234
             +IS  I  GA++  +   T  + LH A         + L++  AD N+   + + PL 
Sbjct: 36  PAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPL- 94

Query: 235 FFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQN 294
             A+ +++  + +  + ++  D+     D  + L  A  +    +++ L+    D+NA +
Sbjct: 95  HAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVD 154

Query: 295 RYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQI 354
                 + +A  +   +   A  LL+  +                               
Sbjct: 155 DLGKSALHWAAAVN--NVDAAVVLLKNGA------------------------------- 181

Query: 355 KRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFI 414
                          N + + +   TPL  AA+    ++AK L+   AN ++T       
Sbjct: 182 ---------------NKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDIT------- 219

Query: 415 SDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVND 453
                 D   R     A   + + ++V+LL L     + 
Sbjct: 220 ------DHMDRLPRDIAQ-ERMHHDIVRLLDLEHHHHHH 251

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  124 bits (314), Expect = 4e-32
 Identities = 62/290 (21%), Positives = 103/290 (35%), Gaps = 70/290 (24%)

Query: 370 NINAEGDDMITPLLFAAKHCDLQS-------------AKYLIQKGANVNLTETQKAFISD 416
           ++N  G D  TPL+ A+                        I +GA+          + +
Sbjct: 2   DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGAS----------LHN 51

Query: 417 ARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVK 476
               D    +AL  A ++ +  +  K LL   AD N   N   + PL  A+ +    + +
Sbjct: 52  QT--DRTGETALHLAARY-SRSDAAKRLLEASADANIQDNM-GRTPLHAAVSADAQGVFQ 107

Query: 477 ELQNYGAQ-IDKENYLKNKE-------AARIAHSTTELEERKKINDLLKLNLDFLKNVRS 528
            L    A  +D     +  +       AAR+A         + + + L            
Sbjct: 108 ILIRNRATDLDA----RMHDGTTPLILAARLAV--------EGMLEDL------------ 143

Query: 529 NKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTAL 588
                    I   A VN   +   SAL + A     +   +LL NGA+ + ++    T L
Sbjct: 144 ---------INSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPL 194

Query: 589 HMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
            +A R  S +   + LL H A  D+ D    + P   A+   + DI+ LL
Sbjct: 195 FLAAREGSYE-TAKVLLDHFANRDITD-HMDRLPRDIAQERMHHDIVRLL 242

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  115 bits (291), Expect = 4e-29
 Identities = 45/271 (16%), Positives = 84/271 (30%), Gaps = 79/271 (29%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGA-NV 116
           T L  A   ++    + LL     D N +   GRT L+ A+      +  +LI + A ++
Sbjct: 59  TALHLAARYSRSDAAKRLLEASA-DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDL 117

Query: 117 NDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNE 176
           + R   G TPL LA  L  + +++ L++  ADV A                     D   
Sbjct: 118 DARMHDGTTPLILAARLAVEGMLEDLINSHADVNAV--------------------DDLG 157

Query: 177 IISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFF 236
                                S LH+A    N+    +L+K  A+ +             
Sbjct: 158 --------------------KSALHWAAAVNNVDAAVVLLKNGANKD------------- 184

Query: 237 AIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
                                 + +    + L  A   G+ +  ++L+    + +  +  
Sbjct: 185 ----------------------MQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHM 222

Query: 297 FLPPMFFAIGMGRKHTHVAEYLLQQDSINVN 327
              P   A      H  +   L  +   + +
Sbjct: 223 DRLPRDIAQERM--HHDIVRLLDLEHHHHHH 251

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  111 bits (281), Expect = 8e-28
 Identities = 46/253 (18%), Positives = 90/253 (35%), Gaps = 44/253 (17%)

Query: 359 QIIKRIIDRTENINAEGD-DMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDA 417
            +I   I +  +++ + D    T L  AA++    +AK L++  A+ N            
Sbjct: 37  AVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAN------------ 84

Query: 418 RSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKE 477
              D   R+ L  A    +   + ++L+ + A   D        PL +A +     ++++
Sbjct: 85  -IQDNMGRTPLHAAVS-ADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLED 142

Query: 478 LQNYGAQIDKENYLKNKEAA-RIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKK 536
           L N  A ++  +     ++A   A                            N  D    
Sbjct: 143 LINSHADVNAVD--DLGKSALHWA-------------------------AAVNNVDAAVV 175

Query: 537 NIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHS 596
            +++GA  ++ + R  + L   A +G  E   +LLD+ A+ +           +A     
Sbjct: 176 LLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 235

Query: 597 NDNIVRKLLHHGA 609
           +D IVR L     
Sbjct: 236 HD-IVRLLDLEHH 247

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 86.0 bits (214), Expect = 6e-19
 Identities = 35/223 (15%), Positives = 69/223 (30%), Gaps = 44/223 (19%)

Query: 360 IIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGA-NVNLTETQKAFISDAR 418
             KR+++ + + N + +   TPL  A         + LI+  A +++             
Sbjct: 72  AAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD------------- 118

Query: 419 SSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKEL 478
           +      + L  A +      M++ L+   ADVN   +   +  L  A    +      L
Sbjct: 119 ARMHDGTTPLILAARL-AVEGMLEDLINSHADVNAVDDL-GKSALHWAAAVNNVDAAVVL 176

Query: 479 QNYGAQIDKENYLKNKEAA-RIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKN 537
              GA  D +N    +E    +A                          R   Y+  K  
Sbjct: 177 LKNGANKDMQN--NREETPLFLA-------------------------AREGSYETAKVL 209

Query: 538 IEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFK 580
           ++  A  +++             + + +IV LL       +  
Sbjct: 210 LDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHHHHHH 252

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  147 bits (373), Expect = 2e-40
 Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 17/235 (7%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDH---DVNEKLQDGRTALYMAILQGLYKMVTLLIHHGA 114
           T L  AV    +  V  L++       +++      +T L++A++  L  +V LL+  GA
Sbjct: 11  TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGA 70

Query: 115 NVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKA----DVRAKCSMMVTP-ILAVSANMSE 169
           +    D  G T  HLAC   +   ++ LL   A    D+ A+    +T   +AV+     
Sbjct: 71  SPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTEC-- 128

Query: 170 DSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVN 229
                 E + +L+E GA++      +  SPL  AV   +LS+V+LL++  A+ N  +   
Sbjct: 129 -----QETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSG 183

Query: 230 QEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLV 284
               L  A     + +V   L     D S+ +   ++ L  A     + I++   
Sbjct: 184 SSA-LHSASGRGLLPLVR-TLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKA 236

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  138 bits (350), Expect = 3e-37
 Identities = 56/372 (15%), Positives = 108/372 (29%), Gaps = 138/372 (37%)

Query: 83  VNEKLQDGRTALYMAILQGLYKMVTLLI----HHGANVNDRDEKGYTPLHLACYLGNKNI 138
                +DG T L++A++QG    V  L+      G  ++  +    TPLHLA      ++
Sbjct: 2   ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSV 61

Query: 139 VKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFS 198
           V+ L++  A   A                                +G            +
Sbjct: 62  VRLLVTAGASPMALD-----------------------------RHG-----------QT 81

Query: 199 PLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVS 258
             H A   ++ + +  L+   A   L                               D+ 
Sbjct: 82  AAHLACEHRSPTCLRALLDSAAPGTL-------------------------------DLE 110

Query: 259 ISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYF-LPPMFFAIGMGRKHTHVAEY 317
             + D  + LH A +    + VQ+L++R  DI+A +      P+  A+        + + 
Sbjct: 111 ARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENN--SLSMVQL 168

Query: 318 LLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDD 377
           LLQ  +                                              N+NA+   
Sbjct: 169 LLQHGA----------------------------------------------NVNAQMYS 182

Query: 378 MITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNN 437
             + L  A+    L   + L++ GA+ +               +    + L  A   +  
Sbjct: 183 GSSALHSASGRGLLPLVRTLVRSGADSS-------------LKNCHNDTPLMVARS-RRV 228

Query: 438 IEMVKLLLLHGA 449
           I++++      A
Sbjct: 229 IDILRGKATRPA 240

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  127 bits (321), Expect = 3e-33
 Identities = 57/276 (20%), Positives = 102/276 (36%), Gaps = 50/276 (18%)

Query: 371 INAEGDDMITPLLFAAKHCDLQSAKYLI----QKGANVNLTETQKAFISDARSSDFCFRS 426
                +D  TPL  A    +L +   L+    Q G  +++              +   ++
Sbjct: 2   ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIY-------------NNLRQT 48

Query: 427 ALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQID 486
            L  A        +V+LL+  GA      ++  Q    +A +      ++ L +  A   
Sbjct: 49  PLHLAVIT-TLPSVVRLLVTAGASPMAL-DRHGQTAAHLACEHRSPTCLRALLDSAAPGT 106

Query: 487 KENYLKNKE---AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGAC 543
            +   +N +   A  +A                         V +   + V+  +E GA 
Sbjct: 107 LDLEARNYDGLTALHVA-------------------------VNTECQETVQLLLERGAD 141

Query: 544 VNVSSERRG-SALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVR 602
           ++    + G S LI+        +V LLL +GA+VN +  +G +ALH A        +VR
Sbjct: 142 IDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSAS-GRGLLPLVR 200

Query: 603 KLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
            L+  GA   +K+     TPL  A + +  DI+   
Sbjct: 201 TLVRSGADSSLKN-CHNDTPLMVARSRRVIDILRGK 235

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  122 bits (308), Expect = 2e-31
 Identities = 52/268 (19%), Positives = 85/268 (31%), Gaps = 81/268 (30%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGA--- 114
           T L  AV       V  L++ G        + G+TA ++A        +  L+   A   
Sbjct: 48  TPLHLAVITTLPSVVRLLVTAG-ASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGT 106

Query: 115 -NVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTD 173
            ++  R+  G T LH+A     +  V+ LL + AD+ A                     D
Sbjct: 107 LDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAV--------------------D 146

Query: 174 TNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPL 233
                     +G            SPL  AV   +LS+V+LL++  A+ N          
Sbjct: 147 IK--------SG-----------RSPLIHAVENNSLSMVQLLLQHGANVN---------- 177

Query: 234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQ 293
                                          +S LH A   G L +V+ LV+   D + +
Sbjct: 178 -------------------------AQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLK 212

Query: 294 NRYFLPPMFFAIGMGRKHTHVAEYLLQQ 321
           N +   P+  A         +      +
Sbjct: 213 NCHNDTPLMVARSRR--VIDILRGKATR 238

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  107 bits (271), Expect = 1e-26
 Identities = 40/133 (30%), Positives = 59/133 (44%), Gaps = 10/133 (7%)

Query: 57  LTLLCSAVWDNKIREVEFLLSTGDHDVNEK-LQDGRTALYMAILQGLYKMVTLLIHHGAN 115
           LT L  AV       V+ LL  G  D++   ++ GR+ L  A+      MV LL+ HGAN
Sbjct: 117 LTALHVAVNTECQETVQLLLERG-ADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN 175

Query: 116 VNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTP-ILAVSANMSEDSTDT 174
           VN +   G + LH A   G   +V+ L+   AD   K     TP ++A S  +       
Sbjct: 176 VNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVI------ 229

Query: 175 NEIISMLIENGAN 187
            +I+       A+
Sbjct: 230 -DILRGKATRPAS 241

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  104 bits (263), Expect = 1e-25
 Identities = 54/293 (18%), Positives = 90/293 (30%), Gaps = 89/293 (30%)

Query: 197 FSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFD 256
            +PLH AVV+ NL  V  L+                                       +
Sbjct: 10  DTPLHIAVVQGNLPAVHRLVN-------------------------------LFQQGGRE 38

Query: 257 VSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAE 316
           + I +    + LH A       +V++LV       A +R+       A            
Sbjct: 39  LDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHR--SPTCLR 96

Query: 317 YLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGD 376
            LL   +                                            T ++ A   
Sbjct: 97  ALLDSAA------------------------------------------PGTLDLEARNY 114

Query: 377 DMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKN 436
           D +T L  A      ++ + L+++GA+++  + +              RS L +A +  N
Sbjct: 115 DGLTALHVAVNTECQETVQLLLERGADIDAVDIKSG------------RSPLIHAVE-NN 161

Query: 437 NIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
           ++ MV+LLL HGA+VN          L  A   G   +V+ L   GA    +N
Sbjct: 162 SLSMVQLLLQHGANVNAQMYS-GSSALHSASGRGLLPLVRTLVRSGADSSLKN 213

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  100 bits (251), Expect = 7e-24
 Identities = 47/319 (14%), Positives = 87/319 (27%), Gaps = 102/319 (31%)

Query: 268 LHKACHVGNLQIVQMLVKRKF----DINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDS 323
           LH A   GNL  V  LV        +++  N     P+  A+        V   L+   +
Sbjct: 13  LHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITT--LPSVVRLLVTAGA 70

Query: 324 INVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLL 383
                                                         +  A      T   
Sbjct: 71  ----------------------------------------------SPMALDRHGQTAAH 84

Query: 384 FAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKL 443
            A +H      + L+   A             D  + ++   +AL  A  +    E V+L
Sbjct: 85  LACEHRSPTCLRALLDSAAPGT---------LDLEARNYDGLTALHVAV-NTECQETVQL 134

Query: 444 LLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE-------A 496
           LL  GAD++    K  + PL  A+++    +V+ L  +GA ++     +          A
Sbjct: 135 LLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNA----QMYSGSSALHSA 190

Query: 497 ARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALI 556
           +              +   L                     +  GA  ++ +    + L+
Sbjct: 191 SGRGL--------LPLVRTL---------------------VRSGADSSLKNCHNDTPLM 221

Query: 557 YVAWKGYEEIVDLLLDNGA 575
               +   +I+       A
Sbjct: 222 VARSRRVIDILRGKATRPA 240

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 97.9 bits (245), Expect = 4e-23
 Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 2/101 (1%)

Query: 47  INSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMV 106
           I++   KS   + L  AV +N +  V+ LL  G  +VN ++  G +AL+ A  +GL  +V
Sbjct: 142 IDAVDIKS-GRSPLIHAVENNSLSMVQLLLQHG-ANVNAQMYSGSSALHSASGRGLLPLV 199

Query: 107 TLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKA 147
             L+  GA+ + ++    TPL +A      +I++   ++ A
Sbjct: 200 RTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  144 bits (367), Expect = 1e-39
 Identities = 48/214 (22%), Positives = 86/214 (40%), Gaps = 10/214 (4%)

Query: 72  VEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLAC 131
           +   +  G    N+  + G TAL++A           L+   A+ N +D  G TPLH A 
Sbjct: 7   ISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAV 66

Query: 132 YLGNKNIVKFLLSKKA-DVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVRE 190
               + + + L+  +A D+ A+     TP++  +    E       ++  LI + A+V  
Sbjct: 67  SADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVE------GMLEDLINSHADVNA 120

Query: 191 KMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFL 250
                  S LH+A    N+    +L+K  A+ ++     + P LF A    S +  +  L
Sbjct: 121 VDDL-GKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETP-LFLAAREGSYETAK-VL 177

Query: 251 NSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLV 284
                +  I+D         A    +  IV++L 
Sbjct: 178 LDHFANRDITDHMDRLPRDIAQERMHHDIVRLLD 211

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  132 bits (334), Expect = 3e-35
 Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 13/203 (6%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGA-NV 116
           T L  A   ++    + LL     D N +   GRT L+ A+      +  +LI + A ++
Sbjct: 27  TALHLAARYSRSDAAKRLLEAS-ADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDL 85

Query: 117 NDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTP-ILAVSANMSEDSTDTN 175
           + R   G TPL LA  L  + +++ L++  ADV A   +  +    A + N         
Sbjct: 86  DARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNN-------V 138

Query: 176 EIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLF 235
           +   +L++NGAN   +    + +PL  A  + +    ++L+   A+ ++   +++ P   
Sbjct: 139 DAAVVLLKNGANKDMQNNR-EETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLP-RD 196

Query: 236 FAIESNSVKIVEAFLNSKNFDVS 258
            A E     IV   L+  N   S
Sbjct: 197 IAQERMHHDIVR-LLDEYNLVRS 218

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  119 bits (302), Expect = 7e-31
 Identities = 46/253 (18%), Positives = 91/253 (35%), Gaps = 44/253 (17%)

Query: 360 IIKRIIDRTENINAEGD-DMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDAR 418
           +I   I +  +++ + D    T L  AA++    +AK L++  A+ N             
Sbjct: 6   VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAN------------- 52

Query: 419 SSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKEL 478
             D   R+ L  A    +   + ++L+ + A   D        PL +A +     ++++L
Sbjct: 53  IQDNMGRTPLHAAVS-ADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDL 111

Query: 479 QNYGAQIDKENYLKNKEAA-RIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKN 537
            N  A ++  +     ++A   A                            N  D     
Sbjct: 112 INSHADVNAVD--DLGKSALHWA-------------------------AAVNNVDAAVVL 144

Query: 538 IEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSN 597
           +++GA  ++ + R  + L   A +G  E   +LLD+ A+ +           +A     +
Sbjct: 145 LKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHH 204

Query: 598 DNIVRKLLHHGAY 610
           D IVR L  +   
Sbjct: 205 D-IVRLLDEYNLV 216

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  119 bits (301), Expect = 9e-31
 Identities = 45/277 (16%), Positives = 96/277 (34%), Gaps = 63/277 (22%)

Query: 176 EIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLF 235
            +IS  I  GA++  +   T  + LH A         + L++  AD N+   + + P L 
Sbjct: 5   AVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTP-LH 63

Query: 236 FAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNR 295
            A+ +++  + +  + ++  D+     D  + L  A  +    +++ L+    D+NA + 
Sbjct: 64  AAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDD 123

Query: 296 YFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIK 355
                + +A  +   +   A  LL+  +                                
Sbjct: 124 LGKSALHWAAAVN--NVDAAVVLLKNGA-------------------------------- 149

Query: 356 RLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFIS 415
                         N + + +   TPL  AA+    ++AK L+   AN +          
Sbjct: 150 --------------NKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD---------- 185

Query: 416 DARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVN 452
               +D   R     A   + + ++V+LL  +    +
Sbjct: 186 ---ITDHMDRLPRDIAQ-ERMHHDIVRLLDEYNLVRS 218

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  114 bits (288), Expect = 4e-29
 Identities = 54/252 (21%), Positives = 90/252 (35%), Gaps = 55/252 (21%)

Query: 394 AKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVND 453
               I +GA+          + +    D    +AL  A ++ +  +  K LL   AD N 
Sbjct: 7   ISDFIYQGAS----------LHNQT--DRTGETALHLAARY-SRSDAAKRLLEASADANI 53

Query: 454 TSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE-------AARIAHSTTEL 506
             N   + PL  A+ +    + + L    A        +  +       AAR+A      
Sbjct: 54  QDNM-GRTPLHAAVSADAQGVFQILIRNRATDLDA---RMHDGTTPLILAARLAV----- 104

Query: 507 EERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEI 566
              + + + L                     I   A VN   +   SAL + A     + 
Sbjct: 105 ---EGMLEDL---------------------INSHADVNAVDDLGKSALHWAAAVNNVDA 140

Query: 567 VDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHA 626
             +LL NGA+ + ++    T L +A R  S +   + LL H A  D+ D    + P   A
Sbjct: 141 AVVLLKNGANKDMQNNREETPLFLAAREGSYE-TAKVLLDHFANRDITD-HMDRLPRDIA 198

Query: 627 EAGKNRDIIDLL 638
           +   + DI+ LL
Sbjct: 199 QERMHHDIVRLL 210

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  102 bits (257), Expect = 8e-25
 Identities = 37/209 (17%), Positives = 76/209 (36%), Gaps = 39/209 (18%)

Query: 436 NNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE 495
           +   ++   +  GA +++ +++  +  L +A +       K L    A  + ++      
Sbjct: 2   DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQD--NMGR 59

Query: 496 -----AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGAC-VNVSSE 549
                A             + +  +L                     I + A  ++    
Sbjct: 60  TPLHAAVSADA--------QGVFQIL---------------------IRNRATDLDARMH 90

Query: 550 RRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGA 609
              + LI  A    E +++ L+++ ADVN     G +ALH A   ++ D     LL +GA
Sbjct: 91  DGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVD-AAVVLLKNGA 149

Query: 610 YYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
             DM++    +TPL  A    + +   +L
Sbjct: 150 NKDMQN-NREETPLFLAAREGSYETAKVL 177

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 96.7 bits (242), Expect = 6e-23
 Identities = 51/350 (14%), Positives = 104/350 (29%), Gaps = 130/350 (37%)

Query: 241 NSVKIVEAFLNSKNFDVS-ISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLP 299
           ++  ++  F+  +   +   +D    + LH A         + L++   D N Q+     
Sbjct: 2   DAPAVISDFI-YQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRT 60

Query: 300 PMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQ 359
           P+  A+        V + L++                                       
Sbjct: 61  PLHAAVSAD--AQGVFQILIRN-------------------------------------- 80

Query: 360 IIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARS 419
                  R  +++A   D  TPL+ AA+       + LI   A+VN  +           
Sbjct: 81  -------RATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG-------- 125

Query: 420 SDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQ 479
                +SAL +A    NN++   +LL +GA+ +  +N+ ++ PL +A + G         
Sbjct: 126 -----KSALHWAAAV-NNVDAAVVLLKNGANKDMQNNR-EETPLFLAAREG--------- 169

Query: 480 NYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIE 539
                        + E A+                +L                     ++
Sbjct: 170 -------------SYETAK----------------VL---------------------LD 179

Query: 540 DGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALH 589
             A  +++             + + +IV LL +     +         LH
Sbjct: 180 HFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS-------PQLH 222

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 94.4 bits (236), Expect = 5e-22
 Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 1/95 (1%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           + L  A   N +     LL  G  + + +     T L++A  +G Y+   +L+ H AN +
Sbjct: 127 SALHWAAAVNNVDAAVVLLKNGA-NKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 185

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAK 152
             D     P  +A    + +IV+ L         +
Sbjct: 186 ITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRSPQ 220

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  144 bits (365), Expect = 1e-39
 Identities = 53/245 (21%), Positives = 94/245 (38%), Gaps = 16/245 (6%)

Query: 85  EKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLS 144
           E          +A    L ++   ++   +     D+   T LH AC  G+  IV+FLL 
Sbjct: 2   EGCVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQ 61

Query: 145 KKADVRAKCSMMVTP-ILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFA 203
               V  K     +P  +A SA          EI+  L+  GA+V         +PLH+A
Sbjct: 62  LGVPVNDKDDAGWSPLHIAASAGXD-------EIVKALLVKGAHVNAV-NQNGCTPLHYA 113

Query: 204 VVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGD 263
             K    +  +L++  A+ +     +    +  A    ++K+V   L       +I D +
Sbjct: 114 ASKNRHEIAVMLLEGGANPDAKDHYDATA-MHRAAAKGNLKMVH-ILLFYKASTNIQDTE 171

Query: 264 LNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDS 323
            N+ LH AC    ++  + LV +   I  +N+    P+  A G       +    L +  
Sbjct: 172 GNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKG----GLGLILKRLAEGE 227

Query: 324 INVNL 328
              ++
Sbjct: 228 -EASM 231

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  135 bits (342), Expect = 2e-36
 Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 12/235 (5%)

Query: 57  LTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANV 116
           + +   A         E +L+          QD RTAL+ A   G  ++V  L+  G  V
Sbjct: 8   IMICNLAYSGKLDELKERILADKS-LATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV 66

Query: 117 NDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNE 176
           ND+D+ G++PLH+A   G   IVK LL K A V A      TP+   ++       + +E
Sbjct: 67  NDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASK------NRHE 120

Query: 177 IISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFF 236
           I  ML+E GAN   K  + D + +H A  K NL +V +L+  KA TN+       P L  
Sbjct: 121 IAVMLLEGGANPDAKDHY-DATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTP-LHL 178

Query: 237 AIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDIN 291
           A +   V+  + FL ++   + I + +  + L  A   G L ++   +    + +
Sbjct: 179 ACDEERVEEAK-FLVTQGASIYIENKEEKTPLQVAK--GGLGLILKRLAEGEEAS 230

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  109 bits (274), Expect = 3e-27
 Identities = 58/263 (22%), Positives = 96/263 (36%), Gaps = 45/263 (17%)

Query: 376 DDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHK 435
              I     A      +  + ++   +    T+                R+AL +AC   
Sbjct: 5   VSNIMICNLAYSGKLDELKERILADKSLATRTDQDS-------------RTALHWACSA- 50

Query: 436 NNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE 495
            + E+V+ LL  G  VND  +     PL +A  +G  +IVK L   GA ++      N+ 
Sbjct: 51  GHTEIVEFLLQLGVPVNDKDDA-GWSPLHIAASAGXDEIVKALLVKGAHVNA----VNQN 105

Query: 496 AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSAL 555
                H                           N+++     +E GA  +       +A+
Sbjct: 106 GCTPLHYAAS----------------------KNRHEIAVMLLEGGANPDAKDHYDATAM 143

Query: 556 IYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKD 615
              A KG  ++V +LL   A  N +   G T LH+AC         + L+  GA   +++
Sbjct: 144 HRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACD-EERVEEAKFLVTQGASIYIEN 202

Query: 616 GKTGKTPLKHAEAGKNRDIIDLL 638
            K  KTPL+ A+ G    +I   
Sbjct: 203 -KEEKTPLQVAKGGL--GLILKR 222

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  104 bits (261), Expect = 2e-25
 Identities = 52/253 (20%), Positives = 77/253 (30%), Gaps = 44/253 (17%)

Query: 357 LDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISD 416
           LD++ +RI+           D  T L +A      +  ++L+Q G  VN           
Sbjct: 19  LDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVN----------- 67

Query: 417 ARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVK 476
               D    S L  A       E+VK LL+ GA VN   N+    PL  A      +I  
Sbjct: 68  --DKDDAGWSPLHIAA-SAGXDEIVKALLVKGAHVN-AVNQNGCTPLHYAASKNRHEIAV 123

Query: 477 ELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKK 536
            L   GA  D     K+   A   H                                V  
Sbjct: 124 MLLEGGANPDA----KDHYDATAMHRAAA----------------------KGNLKMVHI 157

Query: 537 NIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHS 596
            +   A  N+      + L     +   E    L+  GA +  ++    T L +A     
Sbjct: 158 LLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGL- 216

Query: 597 NDNIVRKLLHHGA 609
              ++ K L  G 
Sbjct: 217 --GLILKRLAEGE 227

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  142 bits (360), Expect = 1e-38
 Identities = 65/236 (27%), Positives = 100/236 (42%), Gaps = 21/236 (8%)

Query: 58  TLLCSAVWDNKIREV-EFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANV 116
             L  A  +N+  +V E L S     + +K QDGR  L+ ++    +++ + L+    NV
Sbjct: 4   YPLHQACMENEFFKVQELLHSKPS-LLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV 62

Query: 117 NDRDEK---GYTPLHLACYLGNKNIVKFLLSK--KADVRAKCSMMVTP-ILAVSANMSED 170
           N  D     G+TP H+AC +GN  +VK L  +  K D+    +  VT   LAV       
Sbjct: 63  NLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKK---- 118

Query: 171 STDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLI-KCKADTNLIVKVN 229
                E+   LIENGA+VR K  F +  PLH A    +L ++ELL    K+  N   K  
Sbjct: 119 ---WFEVSQFLIENGASVRIKDKF-NQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQG 174

Query: 230 QEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVK 285
             P LF A+           +     +  + D         A +    Q+ +  + 
Sbjct: 175 WTP-LFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN---EQVKKFFLN 226

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  134 bits (341), Expect = 4e-36
 Identities = 51/240 (21%), Positives = 88/240 (36%), Gaps = 26/240 (10%)

Query: 90  GRTALYMAILQG-LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKAD 148
               L+ A ++   +K+  LL    + +  +D+ G  PLH +       I  FLLSK  +
Sbjct: 2   SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMEN 61

Query: 149 VRAKCSMM---VTPILAVSANMSEDSTDTNEIISMLIEN--GANVREKMPFTD---FSPL 200
           V           TP     +  +       E++  L +     ++ +          + L
Sbjct: 62  VNLDDYPDDSGWTPFHIACSVGNL------EVVKSLYDRPLKPDLNKI----TNQGVTCL 111

Query: 201 HFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSIS 260
           H AV KK   V + LI+  A   +  K NQ P L  A    S+K++E         V+  
Sbjct: 112 HLAVGKKWFEVSQFLIENGASVRIKDKFNQIP-LHRAASVGSLKLIELLCGLGKSAVNWQ 170

Query: 261 DGDLNSLLHKACHVGNLQIVQMLV-KRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLL 319
           D    + L  A   G+     +LV K   + +  +         A+     +  V ++ L
Sbjct: 171 DKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL-----NEQVKKFFL 225

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  118 bits (298), Expect = 3e-30
 Identities = 51/273 (18%), Positives = 90/273 (32%), Gaps = 56/273 (20%)

Query: 380 TPLLFAAKHCDLQS-AKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNI 438
            PL  A    +     + L  K + +             +  D   R  L ++       
Sbjct: 4   YPLHQACMENEFFKVQELLHSKPSLLL-----------QKDQDG--RIPLHWSVS-FQAH 49

Query: 439 EMVKLLLLHGADVN--DTSNKPKQKPLAVAIQSGDFQIVKEL--QNYGAQIDKENYLKNK 494
           E+   LL    +VN  D  +     P  +A   G+ ++VK L  +     ++K       
Sbjct: 50  EITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKIT--NQG 107

Query: 495 EAA-RIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGS 553
                +A                         V    ++  +  IE+GA V +  +    
Sbjct: 108 VTCLHLA-------------------------VGKKWFEVSQFLIENGASVRIKDKFNQI 142

Query: 554 ALIYVAWKGYEEIVDLLLDNG-ADVNFKSATGFTALHMACRFHSNDNIVRKLL-HHGAYY 611
            L   A  G  ++++LL   G + VN++   G+T L  A      D     L+  +GA Y
Sbjct: 143 PLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGD-AAVLLVEKYGAEY 201

Query: 612 DMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNL 644
           D+ D   G      A    N  +      ++N+
Sbjct: 202 DLVD-NKGAKAEDVA---LNEQVKKF--FLNNV 228

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  108 bits (273), Expect = 6e-27
 Identities = 47/263 (17%), Positives = 94/263 (35%), Gaps = 60/263 (22%)

Query: 356 RLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFIS 415
              ++ + +  +   +  +  D   PL ++      +   +L+ K  NVNL +       
Sbjct: 14  EFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYP----- 68

Query: 416 DARSSDFCFRSALQYACKHKNNIEMVKLLLLH--GADVNDTSNKPKQKPLAVAIQSGDFQ 473
                D    +    AC    N+E+VK L       D+N  +N+     L +A+    F+
Sbjct: 69  -----DDSGWTPFHIACS-VGNLEVVKSLYDRPLKPDLNKITNQ-GVTCLHLAVGKKWFE 121

Query: 474 IVKELQNYGAQIDKENYLKNKE-------AARIAHSTTELEERKKINDLLKLNLDFLKNV 526
           + + L   GA +      K+K        AA +           K+ +LL          
Sbjct: 122 VSQFLIENGASVRI----KDKFNQIPLHRAASVGS--------LKLIELL---------- 159

Query: 527 RSNKYDEVKKNIEDG-ACVNVSSERRGSALIYVAWKGYEEIVDLLLDN-GADVNFKSATG 584
                         G + VN   ++  + L +   +G+ +   LL++  GA+ +     G
Sbjct: 160 -----------CGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKG 208

Query: 585 FTALHMACRFHSNDNIVRKLLHH 607
             A  +A     N+ + +  L++
Sbjct: 209 AKAEDVA----LNEQVKKFFLNN 227

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  103 bits (259), Expect = 4e-25
 Identities = 40/221 (18%), Positives = 73/221 (33%), Gaps = 37/221 (16%)

Query: 425 RSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQ 484
              L  AC      ++ +LL    + +        + PL  ++     +I   L +    
Sbjct: 3   NYPLHQACMENEFFKVQELLHSKPSLLLQKDQD-GRIPLHWSVSFQAHEITSFLLSKMEN 61

Query: 485 IDKENYLKNKE------AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNI 538
           ++ ++Y  +        A  + +         ++   L                      
Sbjct: 62  VNLDDYPDDSGWTPFHIACSVGN--------LEVVKSL------YDR------------- 94

Query: 539 EDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSND 598
                +N  + +  + L     K + E+   L++NGA V  K       LH A    S  
Sbjct: 95  PLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLK 154

Query: 599 NIVRKLLHHG-AYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
            ++  L   G +  + +D K G TPL HA A  + D   LL
Sbjct: 155 -LIELLCGLGKSAVNWQD-KQGWTPLFHALAEGHGDAAVLL 193

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 92.1 bits (230), Expect = 3e-21
 Identities = 56/351 (15%), Positives = 95/351 (27%), Gaps = 140/351 (39%)

Query: 123 GYTPLHLACYLGNKNIV-KFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISML 181
              PLH AC       V + L SK + +  K                    D +      
Sbjct: 2   SNYPLHQACMENEFFKVQELLHSKPSLLLQK--------------------DQDG----- 36

Query: 182 IENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESN 241
                            PLH++V  +   +   L+    + NL                 
Sbjct: 37  ---------------RIPLHWSVSFQAHEITSFLLSKMENVNLD---------------- 65

Query: 242 SVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKF--DINAQNRYFLP 299
                              D    +  H AC VGNL++V+ L  R    D+N      + 
Sbjct: 66  ----------------DYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVT 109

Query: 300 PMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQ 359
            +  A+G       V+++L++  +                                    
Sbjct: 110 CLHLAVGKK--WFEVSQFLIENGA------------------------------------ 131

Query: 360 IIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGAN-VNLTETQKAFISDAR 418
                     ++  +      PL  AA    L+  + L   G + VN             
Sbjct: 132 ----------SVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVN------------- 168

Query: 419 SSDFCFRSALQYACKHKNNIEMVKLLLL-HGADVNDTSNKPKQKPLAVAIQ 468
             D    + L +A     + +   LL+  +GA+ +   NK   K   VA+ 
Sbjct: 169 WQDKQGWTPLFHALAE-GHGDAAVLLVEKYGAEYDLVDNK-GAKAEDVALN 217

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 44.4 bits (106), Expect = 5e-05
 Identities = 12/55 (21%), Positives = 21/55 (38%), Gaps = 1/55 (1%)

Query: 584 GFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
               LH AC  +    +   L    +    KD + G+ PL  + + +  +I   L
Sbjct: 2   SNYPLHQACMENEFFKVQELLHSKPSLLLQKD-QDGRIPLHWSVSFQAHEITSFL 55

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  140 bits (355), Expect = 6e-38
 Identities = 44/221 (19%), Positives = 77/221 (34%), Gaps = 18/221 (8%)

Query: 85  EKLQDGRTALYMAILQG----LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVK 140
           +  +DG + L++AI+        +++  +    A +N ++    TPLHLA       I +
Sbjct: 3   QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAE 62

Query: 141 FLLSKKADVRAKCSMMVTP-ILAVSANMSEDSTDTNEIISMLIENGANVREKMP-----F 194
            LL    D   +     TP  LA               + +L ++              +
Sbjct: 63  ALLGAGCDPELRDFRGNTPLHLACEQG-------CLASVGVLTQSCTTPHLHSILKATNY 115

Query: 195 TDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKN 254
              + LH A +   L +VELL+   AD N     N    L  A++  +  +V   L    
Sbjct: 116 NGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVS-LLLKCG 174

Query: 255 FDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNR 295
            DV+       S         + +I Q L +   +      
Sbjct: 175 ADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLP 215

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  131 bits (333), Expect = 6e-35
 Identities = 45/216 (20%), Positives = 76/216 (35%), Gaps = 17/216 (7%)

Query: 72  VEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLAC 131
           +  +       +N +    +T L++A++    ++   L+  G +   RD +G TPLHLAC
Sbjct: 28  IRQVKGDLA-FLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLAC 86

Query: 132 YLGNKNIVKFLLSKKADVRAKCSMMV------TPI-LAVSANMSEDSTDTNEIISMLIEN 184
             G    V  L            +        T + LA              I+ +L+  
Sbjct: 87  EQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHG-------YLGIVELLVSL 139

Query: 185 GANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVK 244
           GA+V  + P    + LH AV  +N  +V LL+KC AD N +      P         S +
Sbjct: 140 GADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSP-YQLTWGRPSTR 198

Query: 245 IVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIV 280
           I +  L     +      +              +  
Sbjct: 199 IQQ-QLGQLTLENLQMLPESEDEESYDTESEFTEFT 233

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  125 bits (317), Expect = 7e-33
 Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 18/198 (9%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGAN-- 115
           T L  AV  N+    E LL  G  D   +   G T L++A  QG    V +L        
Sbjct: 47  TPLHLAVITNQPEIAEALLGAG-CDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPH 105

Query: 116 ----VNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMM-VTP-ILAVSANMSE 169
               +   +  G+T LHLA   G   IV+ L+S  ADV A+      T   LAV      
Sbjct: 106 LHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ--- 162

Query: 170 DSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVN 229
                 +++S+L++ GA+V     +  +SP      + +  + + L +   +   ++   
Sbjct: 163 ----NPDLVSLLLKCGADVNRVT-YQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLP-E 216

Query: 230 QEPLLFFAIESNSVKIVE 247
            E    +  ES   +  E
Sbjct: 217 SEDEESYDTESEFTEFTE 234

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  111 bits (279), Expect = 1e-27
 Identities = 45/271 (16%), Positives = 78/271 (28%), Gaps = 60/271 (22%)

Query: 380 TPLLFAAKH----CDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHK 435
           + L  A  H      ++  + +    A +N               +   ++ L  A    
Sbjct: 10  SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQ-------------NNLQQTPLHLAVIT- 55

Query: 436 NNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYL--KN 493
           N  E+ + LL  G D      +    PL +A + G    V  L          + L   N
Sbjct: 56  NQPEIAEALLGAGCDPELRDFR-GNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATN 114

Query: 494 KE-------AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNV 546
                    A+   +          I +LL                     +  GA VN 
Sbjct: 115 YNGHTCLHLASIHGY--------LGIVELL---------------------VSLGADVNA 145

Query: 547 SSERRG-SALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLL 605
                G +AL         ++V LLL  GADVN  +  G++   +     S   I ++L 
Sbjct: 146 QEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTR-IQQQLG 204

Query: 606 HHGAYYDMKDGKTGKTPLKHAEAGKNRDIID 636
                         +    +    +  +  +
Sbjct: 205 QLTLENLQML-PESEDEESYDTESEFTEFTE 234

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  104 bits (261), Expect = 3e-25
 Identities = 39/239 (16%), Positives = 71/239 (29%), Gaps = 46/239 (19%)

Query: 359 QIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDAR 418
           ++I+++      +N + +   TPL  A      + A+ L+  G +  L            
Sbjct: 26  EVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELR----------- 74

Query: 419 SSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTS-----NKPKQKPLAVAIQSGDFQ 473
             DF   + L  AC+    +  V +L       +  S     N      L +A   G   
Sbjct: 75  --DFRGNTPLHLACEQ-GCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLG 131

Query: 474 IVKELQNYGAQIDKENYLKNKEAARIA-HSTTELEERKKINDLLKLNLDFLKNVRSNKYD 532
           IV+ L + GA ++     +     R A H   +  +   +  LL                
Sbjct: 132 IVELLVSLGADVNA----QEPCNGRTALHLAVD-LQNPDLVSLL---------------- 170

Query: 533 EVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMA 591
                ++ GA VN  + +  S       +    I   L     +               
Sbjct: 171 -----LKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYD 224

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  101 bits (255), Expect = 2e-24
 Identities = 49/347 (14%), Positives = 84/347 (24%), Gaps = 140/347 (40%)

Query: 120 DEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIIS 179
            E G + LHLA     K +                                     E+I 
Sbjct: 5   TEDGDSFLHLAIIHEEKALTM-----------------------------------EVIR 29

Query: 180 MLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIE 239
            +  + A +  +      +PLH AV+     + E L+    D  L               
Sbjct: 30  QVKGDLAFLNFQNNL-QQTPLHLAVITNQPEIAEALLGAGCDPEL--------------- 73

Query: 240 SNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKR------KFDINAQ 293
                                D   N+ LH AC  G L  V +L +          + A 
Sbjct: 74  --------------------RDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKAT 113

Query: 294 NRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQ 353
           N      +  A   G  +  + E L+   +                              
Sbjct: 114 NYNGHTCLHLASIHG--YLGIVELLVSLGA------------------------------ 141

Query: 354 IKRLDQIIKRIIDRTENINA-EGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKA 412
                           ++NA E  +  T L  A    +      L++ GA+VN       
Sbjct: 142 ----------------DVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVN------- 178

Query: 413 FISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPK 459
                    +   S  Q     + +  + + L     +      + +
Sbjct: 179 ------RVTYQGYSPYQLTWG-RPSTRIQQQLGQLTLENLQMLPESE 218

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 95.3 bits (238), Expect = 3e-22
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 2/97 (2%)

Query: 57  LTLLCSAVWDNKIREVEFLLSTGDHDVNEK-LQDGRTALYMAILQGLYKMVTLLIHHGAN 115
            T L  A     +  VE L+S G  DVN +   +GRTAL++A+      +V+LL+  GA+
Sbjct: 118 HTCLHLASIHGYLGIVELLVSLG-ADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGAD 176

Query: 116 VNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAK 152
           VN    +GY+P  L     +  I + L     +    
Sbjct: 177 VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQM 213

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 77.6 bits (192), Expect = 3e-16
 Identities = 25/121 (20%), Positives = 41/121 (33%), Gaps = 8/121 (6%)

Query: 524 KNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSAT 583
              ++   + +++   D A +N  +  + + L         EI + LL  G D   +   
Sbjct: 18  HEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFR 77

Query: 584 GFTALHMACRFHSNDNIVRKLLHHGA------YYDMKDGKTGKTPLKHAEAGKNRDIIDL 637
           G T LH+AC        V  L                +   G T L  A       I++L
Sbjct: 78  GNTPLHLACE-QGCLASVGVLTQSCTTPHLHSILKATN-YNGHTCLHLASIHGYLGIVEL 135

Query: 638 L 638
           L
Sbjct: 136 L 136

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 76.8 bits (190), Expect = 6e-16
 Identities = 27/119 (22%), Positives = 48/119 (40%), Gaps = 7/119 (5%)

Query: 526 VRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGAD------VNF 579
           V +N+ +  +  +  G    +   R  + L     +G    V +L  +         +  
Sbjct: 53  VITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKA 112

Query: 580 KSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
            +  G T LH+A   H    IV  L+  GA  + ++   G+T L  A   +N D++ LL
Sbjct: 113 TNYNGHTCLHLASI-HGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLL 170

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 43.3 bits (103), Expect = 1e-04
 Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 4/58 (6%)

Query: 584 GFTALHMACRFHSND---NIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
           G + LH+A           ++R++    A+ + ++    +TPL  A      +I + L
Sbjct: 8   GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQN-NLQQTPLHLAVITNQPEIAEAL 64

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  137 bits (349), Expect = 7e-38
 Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 9/168 (5%)

Query: 57  LTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANV 116
           +  + +   +     V   L   ++D+N+    G + L+ A  +G   +V +LI  GA +
Sbjct: 6   MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI 65

Query: 117 NDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTP-ILAVSANMSEDSTDTN 175
           N  +    TPLHLA   G+++IV+ LL  KAD+ A       P   A            +
Sbjct: 66  NVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWG-------QD 118

Query: 176 EIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTN 223
           ++   L+ NGA V     +    P+  A       + E   K   + N
Sbjct: 119 QVAEDLVANGALVSICNKY-GEMPVDKAKAPLRELLRERAEKMGQNLN 165

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  119 bits (300), Expect = 3e-31
 Identities = 40/197 (20%), Positives = 72/197 (36%), Gaps = 28/197 (14%)

Query: 89  DGRTALYMAILQGLYKMVTLLIHHGAN-VNDRDEKGYTPLHLACYLGNKNIVKFLLSKKA 147
           +    ++    +G    V L + +  N +N  D+ G++PLH AC  G   +V+ L+ + A
Sbjct: 4   EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGA 63

Query: 148 DVRAKCSMMVTP-ILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTD---FSPLHFA 203
            +        TP  LA S           +I+  L++  A++       +     PLH+A
Sbjct: 64  RINVMNRGDDTPLHLAASHGH-------RDIVQKLLQYKADINAV----NEHGNVPLHYA 112

Query: 204 VVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDG- 262
                  V E L+   A  ++  K  + P +  A       + E              G 
Sbjct: 113 CFWGQDQVAEDLVANGALVSICNKYGEMP-VDKAKAPLRELLRE-RA--------EKMGQ 162

Query: 263 DLNSL-LHKACHVGNLQ 278
           +LN +        G  +
Sbjct: 163 NLNRIPYKDTFWKGTTR 179

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 96.3 bits (241), Expect = 3e-23
 Identities = 37/177 (20%), Positives = 63/177 (35%), Gaps = 12/177 (6%)

Query: 120 DEKGYTPLHLACYLGNKNIVKFLLSKKA-DVRAKCSMMVTP-ILAVSANMSEDSTDTNEI 177
             +    +   C  GN   V+  L     D+        +P   A     S        +
Sbjct: 2   SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRS-------AV 54

Query: 178 ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFA 237
           + MLI  GA +       D +PLH A    +  +V+ L++ KAD N + +    P L +A
Sbjct: 55  VEMLIMRGARINVMNRG-DDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVP-LHYA 112

Query: 238 IESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQN 294
                 ++ E  L +    VSI +      + KA       + +   K   ++N   
Sbjct: 113 CFWGQDQVAE-DLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIP 168

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 94.8 bits (237), Expect = 1e-22
 Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 1/96 (1%)

Query: 57  LTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANV 116
            T L  A        V+ LL     D+N   + G   L+ A   G  ++   L+ +GA V
Sbjct: 73  DTPLHLAASHGHRDIVQKLLQYK-ADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALV 131

Query: 117 NDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAK 152
           +  ++ G  P+  A     + + +       ++   
Sbjct: 132 SICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRI 167

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 92.5 bits (231), Expect = 8e-22
 Identities = 42/224 (18%), Positives = 69/224 (30%), Gaps = 62/224 (27%)

Query: 234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQ 293
           +F      +   V  +L++   D++  D    S LH AC  G   +V+ML+ R   IN  
Sbjct: 9   IFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVM 68

Query: 294 NRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQ 353
           NR    P+  A   G  H  + + LLQ  +                              
Sbjct: 69  NRGDDTPLHLAASHG--HRDIVQKLLQYKA------------------------------ 96

Query: 354 IKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAF 413
                           +INA  +    PL +A      Q A+ L+  GA V++       
Sbjct: 97  ----------------DINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSIC------ 134

Query: 414 ISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNK 457
                  +      +  A        + +     G ++N    K
Sbjct: 135 -------NKYGEMPVDKAKAP-LRELLRERAEKMGQNLNRIPYK 170

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 92.1 bits (230), Expect = 1e-21
 Identities = 39/236 (16%), Positives = 74/236 (31%), Gaps = 67/236 (28%)

Query: 268 LHKACHVGNLQIVQMLVKRK-FDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINV 326
           +   C  GN   V++ +     D+N  + +   P+ +A   G   + V E L+ + +   
Sbjct: 9   IFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREG--RSAVVEMLIMRGA--- 63

Query: 327 NLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAA 386
                                                       IN       TPL  AA
Sbjct: 64  -------------------------------------------RINVMNRGDDTPLHLAA 80

Query: 387 KHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLL 446
            H      + L+Q  A++N             + +      L YAC      ++ + L+ 
Sbjct: 81  SHGHRDIVQKLLQYKADIN-------------AVNEHGNVPLHYAC-FWGQDQVAEDLVA 126

Query: 447 HGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHS 502
           +GA V+   NK  + P+  A       + +  +  G  +++  Y   K+      +
Sbjct: 127 NGALVS-ICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIPY---KDTFWKGTT 178

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 90.2 bits (225), Expect = 4e-21
 Identities = 36/191 (18%), Positives = 64/191 (33%), Gaps = 44/191 (23%)

Query: 427 ALQYACKHKNNIEMVKLLLLHGA-DVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQI 485
            +   C  + N   V+L L +   D+N   +     PL  A + G   +V+ L   GA+I
Sbjct: 8   DIFTQC-REGNAVAVRLWLDNTENDLNQGDDH-GFSPLHWACREGRSAVVEMLIMRGARI 65

Query: 486 DKENYLKNKE-------AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNI 538
           +      N+        AA                                  D V+K +
Sbjct: 66  NV----MNRGDDTPLHLAAS-----------------------------HGHRDIVQKLL 92

Query: 539 EDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSND 598
           +  A +N  +E     L Y  + G +++ + L+ NGA V+  +  G   +  A       
Sbjct: 93  QYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLREL 152

Query: 599 NIVRKLLHHGA 609
            +  +    G 
Sbjct: 153 -LRERAEKMGQ 162

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 87.1 bits (217), Expect = 5e-20
 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 2/101 (1%)

Query: 538 IEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSN 597
           I  GA +NV +    + L   A  G+ +IV  LL   AD+N  +  G   LH AC F   
Sbjct: 59  IMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYAC-FWGQ 117

Query: 598 DNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
           D +   L+ +GA   + + K G+ P+  A+A     + +  
Sbjct: 118 DQVAEDLVANGALVSICN-KYGEMPVDKAKAPLRELLRERA 157

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 86.7 bits (216), Expect = 7e-20
 Identities = 31/207 (14%), Positives = 67/207 (32%), Gaps = 56/207 (27%)

Query: 380 TPLLFAAKHCDLQSAKYLIQKGAN-VNLTETQKAFISDARSSDFCFRSALQYACKHKNNI 438
             +    +  +  + +  +    N +N  +                 S L +AC+     
Sbjct: 7   DDIFTQCREGNAVAVRLWLDNTENDLNQGDDHG-------------FSPLHWACRE-GRS 52

Query: 439 EMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE--- 495
            +V++L++ GA +N   N+    PL +A   G   IV++L  Y A I+      N+    
Sbjct: 53  AVVEMLIMRGARINVM-NRGDDTPLHLAASHGHRDIVQKLLQYKADINA----VNEHGNV 107

Query: 496 ----AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERR 551
               A              ++ + L                     + +GA V++ ++  
Sbjct: 108 PLHYACFWGQ--------DQVAEDL---------------------VANGALVSICNKYG 138

Query: 552 GSALIYVAWKGYEEIVDLLLDNGADVN 578
              +        E + +     G ++N
Sbjct: 139 EMPVDKAKAPLRELLRERAEKMGQNLN 165

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 82.5 bits (205), Expect = 2e-18
 Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 3/114 (2%)

Query: 526 VRSNKYDEVKKNIEDGAC-VNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATG 584
            R      V+  +++    +N   +   S L +   +G   +V++L+  GA +N  +   
Sbjct: 13  CREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGD 72

Query: 585 FTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
            T LH+A   H + +IV+KLL + A  +  + + G  PL +A       + + L
Sbjct: 73  DTPLHLAAS-HGHRDIVQKLLQYKADINAVN-EHGNVPLHYACFWGQDQVAEDL 124

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 69.4 bits (171), Expect = 7e-14
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 3/86 (3%)

Query: 554 ALIYVAWKGYEEIVDLLLDNGA-DVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYD 612
            +     +G    V L LDN   D+N     GF+ LH ACR   +  +V  L+  GA  +
Sbjct: 8   DIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSA-VVEMLIMRGARIN 66

Query: 613 MKDGKTGKTPLKHAEAGKNRDIIDLL 638
           + + +   TPL  A +  +RDI+  L
Sbjct: 67  VMN-RGDDTPLHLAASHGHRDIVQKL 91

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 56.7 bits (138), Expect = 2e-09
 Identities = 12/73 (16%), Positives = 23/73 (31%), Gaps = 7/73 (9%)

Query: 63  AVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEK 122
           A +  + +  E L++ G   V+   + G   +  A       +       G N+N     
Sbjct: 112 ACFWGQDQVAEDLVANG-ALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNR---- 166

Query: 123 GYTPLHLACYLGN 135
              P     + G 
Sbjct: 167 --IPYKDTFWKGT 177

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 42.8 bits (102), Expect = 9e-05
 Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 5/57 (8%)

Query: 584 GFTALHMACRFHSNDNIVRKLLHHGAYY-DMKDGKTGKTPLKHAEAGKNR-DIIDLL 638
               +   CR   N   VR  L +     +  D   G +PL H    + R  ++++L
Sbjct: 5   FMDDIFTQCR-EGNAVAVRLWLDNTENDLNQGD-DHGFSPL-HWACREGRSAVVEML 58

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  130 bits (331), Expect = 2e-35
 Identities = 33/166 (19%), Positives = 65/166 (39%), Gaps = 7/166 (4%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
             +       ++ +++  L  GD+ VN+  + G T L  A   G  + V  L+  GA+ +
Sbjct: 4   LSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPH 63

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEI 177
              ++  + L LA   G  +IV  LL +  D+        TP+L              + 
Sbjct: 64  ILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHV------KC 117

Query: 178 ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTN 223
           +  L+  GA++  +     ++P+  AV      V +++        
Sbjct: 118 VEALLARGADLTTEADS-GYTPMDLAVALGYRKVQQVIENHILKLF 162

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  121 bits (306), Expect = 5e-32
 Identities = 39/212 (18%), Positives = 69/212 (32%), Gaps = 51/212 (24%)

Query: 90  GRTALYMAILQGLYKMVTLLIHHGAN-VNDRDEKGYTPLHLACYLGNKNIVKFLLSKKAD 148
              +++    QG    +   +  G N VN  DE+G+TPL  A   G    V+FLL   AD
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD 61

Query: 149 VRAKCSMMVTP-ILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTD---FSPLHFAV 204
                    +   LA +   +       +I+ +L+E   ++       D    +PL +AV
Sbjct: 62  PHILAKERESALSLASTGGYT-------DIVGLLLERDVDINIY----DWNGGTPLLYAV 110

Query: 205 VKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDL 264
              ++  VE L+   AD                                           
Sbjct: 111 RGNHVKCVEALLARGADLT-----------------------------------TEADSG 135

Query: 265 NSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
            + +  A  +G  ++ Q++      +   N  
Sbjct: 136 YTPMDLAVALGYRKVQQVIENHILKLFQSNLV 167

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  107 bits (269), Expect = 5e-27
 Identities = 33/203 (16%), Positives = 70/203 (34%), Gaps = 43/203 (21%)

Query: 427 ALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQID 486
           ++      +  ++ +K  L  G ++ +  ++    PL  A   G+ + V+ L  +GA   
Sbjct: 5   SIHQLAA-QGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPH 63

Query: 487 KENYLKNKE-------AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIE 539
                  KE       A+   +          I  LL                     +E
Sbjct: 64  I----LAKERESALSLASTGGY--------TDIVGLL---------------------LE 90

Query: 540 DGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDN 599
               +N+     G+ L+Y     + + V+ LL  GAD+  ++ +G+T + +A        
Sbjct: 91  RDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVA-LGYRK 149

Query: 600 IVRKLLHHGAYYDMKDGKTGKTP 622
           + + + +H       +      P
Sbjct: 150 VQQVIENHILKLFQSN-LVPADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 97.1 bits (243), Expect = 1e-23
 Identities = 29/223 (13%), Positives = 73/223 (32%), Gaps = 64/223 (28%)

Query: 268 LHKACHVGNLQIVQMLVKRKFD-INAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINV 326
           +H+    G L  ++  +++  + +N  +     P+ +A   G        +LL+  +   
Sbjct: 6   IHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFG--EIETVRFLLEWGA--- 60

Query: 327 NLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAA 386
                                                      + +    +  + L  A+
Sbjct: 61  -------------------------------------------DPHILAKERESALSLAS 77

Query: 387 KHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLL 446
                     L+++  ++N               +    + L YA    N+++ V+ LL 
Sbjct: 78  TGGYTDIVGLLLERDVDIN-----------IYDWN--GGTPLLYAV-RGNHVKCVEALLA 123

Query: 447 HGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
            GAD+  T       P+ +A+  G  ++ + ++N+  ++ + N
Sbjct: 124 RGADLT-TEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSN 165

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 97.1 bits (243), Expect = 1e-23
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 1/88 (1%)

Query: 72  VEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLAC 131
           V  LL     D+N    +G T L  A+     K V  L+  GA++    + GYTP+ LA 
Sbjct: 85  VGLLLERDV-DINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAV 143

Query: 132 YLGNKNIVKFLLSKKADVRAKCSMMVTP 159
            LG + + + + +    +     +   P
Sbjct: 144 ALGYRKVQQVIENHILKLFQSNLVPADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 90.9 bits (227), Expect = 2e-21
 Identities = 39/184 (21%), Positives = 64/184 (34%), Gaps = 41/184 (22%)

Query: 462 PLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE-------AARIAHSTTELEERKKIND 514
            +      G+   +KE    G   +  N   ++        A+             +   
Sbjct: 5   SIHQLAAQGELDQLKEHLRKGD--NLVN-KPDERGFTPLIWASAFGE--------IETVR 53

Query: 515 LLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNG 574
            L                     +E GA  ++ ++ R SAL   +  GY +IV LLL+  
Sbjct: 54  FL---------------------LEWGADPHILAKERESALSLASTGGYTDIVGLLLERD 92

Query: 575 ADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDI 634
            D+N     G T L  A R  ++   V  LL  GA    +   +G TP+  A A   R +
Sbjct: 93  VDINIYDWNGGTPLLYAVR-GNHVKCVEALLARGADLTTEA-DSGYTPMDLAVALGYRKV 150

Query: 635 IDLL 638
             ++
Sbjct: 151 QQVI 154

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 90.6 bits (226), Expect = 2e-21
 Identities = 35/215 (16%), Positives = 66/215 (30%), Gaps = 56/215 (26%)

Query: 380 TPLLFAAKHCDLQSAKYLIQKGAN-VNLTETQKAFISDARSSDFCFRSALQYACKHKNNI 438
             +   A   +L   K  ++KG N VN               D    + L +A      I
Sbjct: 4   LSIHQLAAQGELDQLKEHLRKGDNLVN-------------KPDERGFTPLIWASA-FGEI 49

Query: 439 EMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE--- 495
           E V+ LL  GAD +  + + ++  L++A   G   IV  L      I+      +     
Sbjct: 50  ETVRFLLEWGADPHILAKE-RESALSLASTGGYTDIVGLLLERDVDINI----YDWNGGT 104

Query: 496 ----AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERR 551
               A R  H         K  + L                     +  GA +   ++  
Sbjct: 105 PLLYAVRGNH--------VKCVEAL---------------------LARGADLTTEADSG 135

Query: 552 GSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
            + +      GY ++  ++ ++   +   +     
Sbjct: 136 YTPMDLAVALGYRKVQQVIENHILKLFQSNLVPAD 170

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 86.7 bits (216), Expect = 7e-20
 Identities = 29/261 (11%), Positives = 72/261 (27%), Gaps = 96/261 (36%)

Query: 199 PLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVS 258
            +H    +  L  ++  ++   +                                   V+
Sbjct: 5   SIHQLAAQGELDQLKEHLRKGDN----------------------------------LVN 30

Query: 259 ISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYL 318
             D    + L  A   G ++ V+ L++   D +   +     +  A   G  +T +   L
Sbjct: 31  KPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGG--YTDIVGLL 88

Query: 319 LQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDM 378
           L++D                                               +IN    + 
Sbjct: 89  LERDV----------------------------------------------DINIYDWNG 102

Query: 379 ITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNI 438
            TPLL+A +   ++  + L+ +GA++              +      + +  A       
Sbjct: 103 GTPLLYAVRGNHVKCVEALLARGADLT-----------TEADS--GYTPMDLAVAL-GYR 148

Query: 439 EMVKLLLLHGADVNDTSNKPK 459
           ++ +++  H   +  ++  P 
Sbjct: 149 KVQQVIENHILKLFQSNLVPA 169

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  126 bits (320), Expect = 5e-34
 Identities = 34/169 (20%), Positives = 63/169 (37%), Gaps = 14/169 (8%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
             +       ++  +   +   +  +N   ++G T L  A   G   +V  L+ +GA+  
Sbjct: 5   LSVHQLAAQGEMLYLATRIEQEN-VINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQ 63

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEI 177
              +   + L LAC  G  +IVK LL    DV        TP+L              + 
Sbjct: 64  LLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHV------KC 117

Query: 178 ISMLIENGANVREKMPFTD---FSPLHFAVVKKNLSVVELLIKCKADTN 223
           + ML+E+GA+   +        ++ +  AV     SV +++        
Sbjct: 118 VKMLLESGADPTIE----TDSGYNSMDLAVALGYRSVQQVIESHLLKLL 162

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  122 bits (308), Expect = 2e-32
 Identities = 39/208 (18%), Positives = 72/208 (34%), Gaps = 44/208 (21%)

Query: 89  DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKAD 148
               +++    QG    +   I     +N  DE+G+TPL  A   G   +V+FLL   AD
Sbjct: 2   ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD 61

Query: 149 VRAKCSMMVTP-ILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKK 207
            +       +   LA S   +       +I+ ML++ G +V E       +PL +AV   
Sbjct: 62  PQLLGKGRESALSLACSKGYT-------DIVKMLLDCGVDVNEYDWN-GGTPLLYAVHGN 113

Query: 208 NLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSL 267
           ++  V++L++  AD                                     I      + 
Sbjct: 114 HVKCVKMLLESGADPT-----------------------------------IETDSGYNS 138

Query: 268 LHKACHVGNLQIVQMLVKRKFDINAQNR 295
           +  A  +G   + Q++      +    +
Sbjct: 139 MDLAVALGYRSVQQVIESHLLKLLQNIK 166

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  108 bits (272), Expect = 2e-27
 Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 7/134 (5%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           T L  A    +I  VEFLL  G  D     +   +AL +A  +G   +V +L+  G +VN
Sbjct: 38  TPLMWAAAHGQIAVVEFLLQNGA-DPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVN 96

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEI 177
           + D  G TPL  A +  +   VK LL   AD   +       +    A           +
Sbjct: 97  EYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYR------SV 150

Query: 178 ISMLIENGANVREK 191
             ++  +   + + 
Sbjct: 151 QQVIESHLLKLLQN 164

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 97.5 bits (244), Expect = 1e-23
 Identities = 34/222 (15%), Positives = 69/222 (31%), Gaps = 63/222 (28%)

Query: 268 LHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVN 327
           +H+    G +  +   ++++  IN  +     P+ +A   G     V E+LLQ  +    
Sbjct: 7   VHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHG--QIAVVEFLLQNGA---- 60

Query: 328 LPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAK 387
                                                     +    G    + L  A  
Sbjct: 61  ------------------------------------------DPQLLGKGRESALSLACS 78

Query: 388 HCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLH 447
                  K L+  G +VN               +    + L YA  H N+++ VK+LL  
Sbjct: 79  KGYTDIVKMLLDCGVDVN-----------EYDWNG--GTPLLYAV-HGNHVKCVKMLLES 124

Query: 448 GADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
           GAD            + +A+  G   + + ++++  ++ +  
Sbjct: 125 GADPT-IETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQNI 165

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 91.3 bits (228), Expect = 1e-21
 Identities = 37/184 (20%), Positives = 62/184 (33%), Gaps = 42/184 (22%)

Query: 462 PLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE-------AARIAHSTTELEERKKIND 514
            +      G+   +         I+      ++E       AA              + +
Sbjct: 6   SVHQLAAQGEMLYLATRIEQENVINH----TDEEGFTPLMWAAAHGQ--------IAVVE 53

Query: 515 LLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNG 574
            L                     +++GA   +  + R SAL     KGY +IV +LLD G
Sbjct: 54  FL---------------------LQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCG 92

Query: 575 ADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDI 634
            DVN     G T L  A    ++   V+ LL  GA   ++   +G   +  A A   R +
Sbjct: 93  VDVNEYDWNGGTPLLYAVH-GNHVKCVKMLLESGADPTIET-DSGYNSMDLAVALGYRSV 150

Query: 635 IDLL 638
             ++
Sbjct: 151 QQVI 154

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 91.3 bits (228), Expect = 1e-21
 Identities = 33/202 (16%), Positives = 67/202 (33%), Gaps = 43/202 (21%)

Query: 380 TPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIE 439
             +   A   ++      I++   +N T+ +               + L +A      I 
Sbjct: 5   LSVHQLAAQGEMLYLATRIEQENVINHTDEEG-------------FTPLMWAAA-HGQIA 50

Query: 440 MVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAA-R 498
           +V+ LL +GAD      K ++  L++A   G   IVK L + G  +++ +   N      
Sbjct: 51  VVEFLLQNGADPQ-LLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYD--WNGGTPLL 107

Query: 499 IAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYV 558
            A                         V  N    VK  +E GA   + ++   +++   
Sbjct: 108 YA-------------------------VHGNHVKCVKMLLESGADPTIETDSGYNSMDLA 142

Query: 559 AWKGYEEIVDLLLDNGADVNFK 580
              GY  +  ++  +   +   
Sbjct: 143 VALGYRSVQQVIESHLLKLLQN 164

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 87.1 bits (217), Expect = 4e-20
 Identities = 33/283 (11%), Positives = 61/283 (21%), Gaps = 123/283 (43%)

Query: 123 GYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLI 182
               +H     G    +   + ++  +                                 
Sbjct: 3   NSLSVHQLAAQGEMLYLATRIEQENVINHTD----------------------------- 33

Query: 183 ENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNS 242
           E G           F+PL +A     ++VVE L++  AD                     
Sbjct: 34  EEG-----------FTPLMWAAAHGQIAVVEFLLQNGADPQ------------------- 63

Query: 243 VKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMF 302
                           +      S L  AC  G   IV+ML+    D+N  +     P+ 
Sbjct: 64  ----------------LLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLL 107

Query: 303 FAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIK 362
           +A+     H    + LL+  +                                       
Sbjct: 108 YAVHGN--HVKCVKMLLESGA--------------------------------------- 126

Query: 363 RIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVN 405
                  +   E D     +  A         + +      + 
Sbjct: 127 -------DPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLL 162

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 54.7 bits (133), Expect = 7e-09
 Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 1/63 (1%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           T L  AV  N ++ V+ LL +G  D   +   G  ++ +A+  G   +  ++  H   + 
Sbjct: 104 TPLLYAVHGNHVKCVKMLLESGA-DPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLL 162

Query: 118 DRD 120
              
Sbjct: 163 QNI 165

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 39.7 bits (94), Expect = 8e-04
 Identities = 9/55 (16%), Positives = 18/55 (32%), Gaps = 2/55 (3%)

Query: 584 GFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
              ++H           +   +      +  D + G TPL  A A     +++ L
Sbjct: 3   NSLSVHQLAA-QGEMLYLATRIEQENVINHTD-EEGFTPLMWAAAHGQIAVVEFL 55

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  129 bits (326), Expect = 6e-34
 Identities = 34/252 (13%), Positives = 72/252 (28%), Gaps = 32/252 (12%)

Query: 47  INSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMV 106
           I  S               D               DV  +     T  + A  +   + +
Sbjct: 6   IIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAA-DVVSE---YETPWWTAARKADEQAL 61

Query: 107 TLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMM-VTPILAVSA 165
           + L+    +V+  DE G T L     LG+   V+ L    AD+  +     +T +   + 
Sbjct: 62  SQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120

Query: 166 NMSEDSTDTNEIISMLIENGANVREKMPFTD---FSPLHFAVVKKNLSVVELLIKCKADT 222
            +        E++  L+E GA++  +    D    + L  A      +     ++     
Sbjct: 121 YVRP------EVVEALVELGADIEVE----DERGLTALELAREILKTTPKGNPMQFGRRI 170

Query: 223 NLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQM 282
            L   +N    +         ++ E         +    G    + +            +
Sbjct: 171 GLEKVIN----VLEGQVFEYAEVDE---------IVEKRGKGKDVEYLVRWKDGGDCEWV 217

Query: 283 LVKRKFDINAQN 294
                 +  A++
Sbjct: 218 KGVHVAEDVAKD 229

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  108 bits (273), Expect = 6e-27
 Identities = 30/177 (16%), Positives = 58/177 (32%), Gaps = 22/177 (12%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEK-LQDGRTALYMAILQGLYKMVTLLIHHGANV 116
           T L         + V  L   G  D++ + ++ G TAL+MA      ++V  L+  GA++
Sbjct: 79  TALLFVAGLGSDKCVRLLAEAG-ADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADI 137

Query: 117 NDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNE 176
              DE+G T L LA  +         +     +  +          V   +     +  E
Sbjct: 138 EVEDERGLTALELAREILKTTPKGNPMQFGRRIGLE---------KVINVLEGQVFEYAE 188

Query: 177 IISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPL 233
           +  ++ + G               +    K       +     A+     K  ++ L
Sbjct: 189 VDEIVEKRGKGK---------DVEYLVRWKDGGDCEWVKGVHVAEDV--AKDYEDGL 234

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  103 bits (258), Expect = 7e-25
 Identities = 34/269 (12%), Positives = 71/269 (26%), Gaps = 82/269 (30%)

Query: 370 NINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQ 429
             +    +     L   K     S        A+V                     +   
Sbjct: 7   IGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEY----------------ETPWW 50

Query: 430 YACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
            A + K + + +  LL    DV+   ++  +  L      G  + V+ L   GA +D   
Sbjct: 51  TAAR-KADEQALSQLL-EDRDVDAV-DENGRTALLFVAGLGSDKCVRLLAEAGADLDH-- 105

Query: 490 YLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSE 549
                                                         +++  G        
Sbjct: 106 ----------------------------------------------RDMRGGL------- 112

Query: 550 RRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGA 609
              +AL   A     E+V+ L++ GAD+  +   G TAL +A             +  G 
Sbjct: 113 ---TALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTT-PKGNPMQFGR 168

Query: 610 YYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
              ++        +   +  +  ++ +++
Sbjct: 169 RIGLEK----VINVLEGQVFEYAEVDEIV 193

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  101 bits (255), Expect = 2e-24
 Identities = 37/229 (16%), Positives = 76/229 (33%), Gaps = 38/229 (16%)

Query: 370 NINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQ 429
           ++ +E +   TP   AA+  D Q+   L++   +V+           A   +   R+AL 
Sbjct: 40  DVVSEYE---TPWWTAARKADEQALSQLLE-DRDVD-----------AVDENG--RTALL 82

Query: 430 YACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
           +      + + V+LL   GAD++    +     L +A      ++V+ L   GA I+   
Sbjct: 83  FVA-GLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEV-- 139

Query: 490 YLKNKE-------AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGA 542
             +++        A  I  +T          + ++           N  +       +  
Sbjct: 140 --EDERGLTALELAREILKTTP-------KGNPMQFGRRIGLEKVINVLEGQVFEYAEVD 190

Query: 543 CVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMA 591
            +     +       V WK   +   +   + A+   K       L  A
Sbjct: 191 EIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAEDVAK--DYEDGLEYA 237

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 97.7 bits (244), Expect = 6e-23
 Identities = 45/393 (11%), Positives = 87/393 (22%), Gaps = 154/393 (39%)

Query: 78  TGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKN 137
                 +    +G     +    G         +  A+V     +  TP   A    ++ 
Sbjct: 3   VNKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVV---SEYETPWWTAARKADEQ 59

Query: 138 IVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDF 197
            +  LL +  DV A                               ENG            
Sbjct: 60  ALSQLL-EDRDVDAVD-----------------------------ENG-----------R 78

Query: 198 SPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDV 257
           + L F     +   V LL +  AD                            L+ ++   
Sbjct: 79  TALLFVAGLGSDKCVRLLAEAGAD----------------------------LDHRDMR- 109

Query: 258 SISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEY 317
                   + LH A      ++V+ LV+   DI  ++   L  +  A  +    T     
Sbjct: 110 -----GGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREIL--KTTPKGN 162

Query: 318 LLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDD 377
            +Q                                                  I  E   
Sbjct: 163 PMQFGR----------------------------------------------RIGLEK-- 174

Query: 378 MITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNN 437
            +  +L        +  + + ++G   +                           + K+ 
Sbjct: 175 -VINVLEGQVFEYAEVDEIVEKRGKGKD---------------------VEYLV-RWKDG 211

Query: 438 IEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSG 470
            +   +  +H A+      K  +  L  A+   
Sbjct: 212 GDCEWVKGVHVAEDV---AKDYEDGLEYAVAES 241

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  126 bits (319), Expect = 7e-34
 Identities = 52/164 (31%), Positives = 77/164 (46%), Gaps = 16/164 (9%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
             L  A    +  EV  L++ G  DVN +   G T L++A   G  ++V +L+ +GA+VN
Sbjct: 16  KKLLEAARAGRDDEVRILMANGA-DVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVN 74

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTP-ILAVSANMSEDSTDTNE 176
             D  G TPL LA   G+  IV+ LL   ADV A      TP  LA             E
Sbjct: 75  AVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHL-------E 127

Query: 177 IISMLIENGANVREKMPFTD---FSPLHFAVVKKNLSVVELLIK 217
           I+ +L++NGA+V  +    D    +    ++   N  + E+L K
Sbjct: 128 IVEVLLKNGADVNAQ----DKFGKTAFDISIDNGNEDLAEILQK 167

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  117 bits (297), Expect = 6e-31
 Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 9/176 (5%)

Query: 79  GDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNI 138
           G H  +    D    L  A   G    V +L+ +GA+VN  D  G+TPLHLA + G+  I
Sbjct: 3   GSHHHHHHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEI 62

Query: 139 VKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFS 198
           V+ LL   ADV A     +TP+   +           EI+ +L++NGA+V         +
Sbjct: 63  VEVLLKNGADVNAVDHAGMTPLRLAALFGHL------EIVEVLLKNGADVNANDME-GHT 115

Query: 199 PLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKN 254
           PLH A +  +L +VE+L+K  AD N   K  +      +I++ +  + E  L   N
Sbjct: 116 PLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTA-FDISIDNGNEDLAE-ILQKLN 169

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 99.0 bits (248), Expect = 3e-24
 Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 16/178 (8%)

Query: 108 LLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANM 167
              HHG+++          L  A   G  + V+ L++  ADV A+ +   TP+   + N 
Sbjct: 6   HHHHHGSDLG-------KKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNG 58

Query: 168 SEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVK 227
                   EI+ +L++NGA+V         +PL  A +  +L +VE+L+K  AD N    
Sbjct: 59  HL------EIVEVLLKNGADVNAVDHA-GMTPLRLAALFGHLEIVEVLLKNGADVNANDM 111

Query: 228 VNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVK 285
               P L  A     ++IVE  L     DV+  D    +    +   GN  + ++L K
Sbjct: 112 EGHTP-LHLAAMFGHLEIVE-VLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 92.8 bits (232), Expect = 5e-22
 Identities = 52/200 (26%), Positives = 81/200 (40%), Gaps = 42/200 (21%)

Query: 446 LHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE-------AAR 498
           + G+  +        K L  A ++G    V+ L   GA ++     ++         AA 
Sbjct: 1   MRGSHHHHHHGSDLGKKLLEAARAGRDDEVRILMANGADVNA----EDASGWTPLHLAAF 56

Query: 499 IAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYV 558
             H         +I ++L                     +++GA VN       + L   
Sbjct: 57  NGH--------LEIVEVL---------------------LKNGADVNAVDHAGMTPLRLA 87

Query: 559 AWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKT 618
           A  G+ EIV++LL NGADVN     G T LH+A  F   + IV  LL +GA  + +D K 
Sbjct: 88  ALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLE-IVEVLLKNGADVNAQD-KF 145

Query: 619 GKTPLKHAEAGKNRDIIDLL 638
           GKT    +    N D+ ++L
Sbjct: 146 GKTAFDISIDNGNEDLAEIL 165

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 91.7 bits (229), Expect = 1e-21
 Identities = 47/224 (20%), Positives = 83/224 (37%), Gaps = 63/224 (28%)

Query: 391 LQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGAD 450
           ++ + +    G+++                       L  A +     + V++L+ +GAD
Sbjct: 1   MRGSHHHHHHGSDLG--------------------KKLLEAAR-AGRDDEVRILMANGAD 39

Query: 451 VNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE-------AARIAHST 503
           VN         PL +A  +G  +IV+ L   GA ++      +         AA   H  
Sbjct: 40  VNAEDAS-GWTPLHLAAFNGHLEIVEVLLKNGADVNA----VDHAGMTPLRLAALFGH-- 92

Query: 504 TELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGY 563
                  +I ++L                     +++GA VN +     + L   A  G+
Sbjct: 93  ------LEIVEVL---------------------LKNGADVNANDMEGHTPLHLAAMFGH 125

Query: 564 EEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHH 607
            EIV++LL NGADVN +   G TA  ++    + D +   L   
Sbjct: 126 LEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNED-LAEILQKL 168

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 90.1 bits (225), Expect = 4e-21
 Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           T L  A     +  VE LL  G  DVN    +G T L++A + G  ++V +L+ +GA+VN
Sbjct: 82  TPLRLAALFGHLEIVEVLLKNGA-DVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSK 145
            +D+ G T   ++   GN+++ + L   
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEILQKL 168

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 88.2 bits (220), Expect = 2e-20
 Identities = 47/224 (20%), Positives = 83/224 (37%), Gaps = 64/224 (28%)

Query: 256 DVSISDG-DLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHV 314
                 G DL   L +A   G    V++L+    D+NA++     P+  A   G  H  +
Sbjct: 5   HHHHHHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNG--HLEI 62

Query: 315 AEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAE 374
            E LL+  +                                              ++NA 
Sbjct: 63  VEVLLKNGA----------------------------------------------DVNAV 76

Query: 375 GDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKH 434
               +TPL  AA    L+  + L++ GA+VN             ++D    + L  A   
Sbjct: 77  DHAGMTPLRLAALFGHLEIVEVLLKNGADVN-------------ANDMEGHTPLHLAAMF 123

Query: 435 KNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKEL 478
             ++E+V++LL +GADVN   +K  +    ++I +G+  + + L
Sbjct: 124 -GHLEIVEVLLKNGADVN-AQDKFGKTAFDISIDNGNEDLAEIL 165

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 82.0 bits (204), Expect = 3e-18
 Identities = 45/208 (21%), Positives = 79/208 (37%), Gaps = 51/208 (24%)

Query: 369 ENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSAL 428
            + +  G D+   LL AA+       + L+  GA+VN             + D    + L
Sbjct: 5   HHHHHHGSDLGKKLLEAARAGRDDEVRILMANGADVN-------------AEDASGWTPL 51

Query: 429 QYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKE 488
             A     ++E+V++LL +GADVN   +     PL +A   G  +IV+ L   GA ++  
Sbjct: 52  HLAAF-NGHLEIVEVLLKNGADVN-AVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNAN 109

Query: 489 NYLKNKE-----AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGAC 543
           +           AA   H         +I ++L                     +++GA 
Sbjct: 110 D--MEGHTPLHLAAMFGH--------LEIVEVL---------------------LKNGAD 138

Query: 544 VNVSSERRGSALIYVAWKGYEEIVDLLL 571
           VN   +   +A       G E++ ++L 
Sbjct: 139 VNAQDKFGKTAFDISIDNGNEDLAEILQ 166

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 74.7 bits (185), Expect = 9e-16
 Identities = 45/267 (16%), Positives = 80/267 (29%), Gaps = 105/267 (39%)

Query: 181 LIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIES 240
              +G+++           L  A        V +L+   AD N                 
Sbjct: 7   HHHHGSDLG--------KKLLEAARAGRDDEVRILMANGADVN----------------- 41

Query: 241 NSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPP 300
                               D    + LH A   G+L+IV++L+K   D+NA +   + P
Sbjct: 42  ------------------AEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTP 83

Query: 301 MFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQI 360
           +  A   G  H  + E LL+  +                                     
Sbjct: 84  LRLAALFG--HLEIVEVLLKNGA------------------------------------- 104

Query: 361 IKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSS 420
                    ++NA   +  TPL  AA    L+  + L++ GA+VN             + 
Sbjct: 105 ---------DVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN-------------AQ 142

Query: 421 DFCFRSALQYACKHKNNIEMVKLLLLH 447
           D   ++A   +     N ++ ++L   
Sbjct: 143 DKFGKTAFDISI-DNGNEDLAEILQKL 168

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  127 bits (321), Expect = 2e-33
 Identities = 37/214 (17%), Positives = 70/214 (32%), Gaps = 15/214 (7%)

Query: 72  VEFLLSTGDHDVNEK---LQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLH 128
           +  +L        +      +    L  A L G  ++V   +    + +  +E+G T LH
Sbjct: 1   MRSVLRKAG-SPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALH 59

Query: 129 LACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANV 188
            A    N +IV FL++  A+V +  S   TP+   ++           I   L+++GA +
Sbjct: 60  NAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDT------VICMALVQHGAAI 113

Query: 189 REKMPFTDFSPLHFAVVKKN--LSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIV 246
                    +        +         L   +    L+       L  ++ E       
Sbjct: 114 FATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFG---DE 170

Query: 247 EAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIV 280
            +F   ++  V   DG   +    A   G    V
Sbjct: 171 LSFREGESVTVLRRDGPEETDWWWAALHGQEGYV 204

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 95.8 bits (239), Expect = 1e-22
 Identities = 38/285 (13%), Positives = 74/285 (25%), Gaps = 81/285 (28%)

Query: 361 IKRIIDRTENINA---EGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDA 417
           ++ ++ +  +         + +  LL AA   +L+  +  +++  + +            
Sbjct: 1   MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPS------------ 48

Query: 418 RSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKE 477
              +    +AL  A     N  +V  L+  GA+VN   +     PL  A    D  I   
Sbjct: 49  -QPNEEGITALHNAI-CGANYSIVDFLITAGANVNSPDSH-GWTPLHCAASCNDTVICMA 105

Query: 478 LQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKN 537
           L  +GA I                                                    
Sbjct: 106 LVQHGAAIFA------------------------------------------------TT 117

Query: 538 IEDGACVNVSSERRGSALIY--VAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFH 595
           + DGA          +A        +GY +    L D    +   ++    AL       
Sbjct: 118 LSDGA----------TAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSA-- 165

Query: 596 SNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHL 640
              + +            +DG   +T    A        +   + 
Sbjct: 166 EFGDELSFREGESVTVLRRDGP-EETDWWWAALHGQEGYVPRNYF 209

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 82.3 bits (204), Expect = 7e-18
 Identities = 39/345 (11%), Positives = 68/345 (19%), Gaps = 140/345 (40%)

Query: 106 VTLLIHHGANVNDRDEKGYTP---LHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILA 162
           +  ++    +          P   L  A   G   +V+  + +  D              
Sbjct: 1   MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPN--------- 51

Query: 163 VSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADT 222
                               E G            + LH A+   N S+V+ LI   A+ 
Sbjct: 52  --------------------EEG-----------ITALHNAICGANYSIVDFLITAGAN- 79

Query: 223 NLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQM 282
                                      +NS +     S G   + LH A    +  I   
Sbjct: 80  ---------------------------VNSPD-----SHG--WTPLHCAASCNDTVICMA 105

Query: 283 LVKRKFDINAQNRYF-LPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVM 341
           LV+    I A                   +   A YL                       
Sbjct: 106 LVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYL----------------------- 142

Query: 342 SLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKG 401
                                   D  +++       +  L   +     +   +   + 
Sbjct: 143 -----------------------ADVEQSMGLMNSGAVYALWDYSAEFGDE-LSFREGES 178

Query: 402 ANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLL 446
             V                D    +   +A  H      V     
Sbjct: 179 VTVL-------------RRDGPEETDWWWAALH-GQEGYVPRNYF 209

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 81.5 bits (202), Expect = 1e-17
 Identities = 32/210 (15%), Positives = 58/210 (27%), Gaps = 43/210 (20%)

Query: 360 IIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARS 419
           ++++ +    + +   ++ IT L  A    +     +LI  GANVN           +  
Sbjct: 36  VVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVN-----------SPD 84

Query: 420 SDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPL--AVAIQSGDFQIVKE 477
           S     + L  A    N+  +   L+ HGA +  T+              + G       
Sbjct: 85  SH--GWTPLHCAA-SCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATY 141

Query: 478 LQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKN 537
           L +    +   N       A   +S                             DE+   
Sbjct: 142 LADVEQSMGLMN--SGAVYALWDYSAEFG-------------------------DELSFR 174

Query: 538 IEDGACVNVSSERRGSALIYVAWKGYEEIV 567
             +   V        +   + A  G E  V
Sbjct: 175 EGESVTVLRRDGPEETDWWWAALHGQEGYV 204

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 75.4 bits (186), Expect = 2e-15
 Identities = 38/270 (14%), Positives = 71/270 (26%), Gaps = 72/270 (26%)

Query: 212 VELLIKCKADTNLIVKVNQEPL--LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLH 269
           +  +++         +    PL  L  A  +  +++V+     +  D S  + +  + LH
Sbjct: 1   MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQ-QAVKEMNDPSQPNEEGITALH 59

Query: 270 KACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLP 329
            A    N  IV  L+    ++N+ + +   P+  A       T +   L+Q  +      
Sbjct: 60  NAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCN--DTVICMALVQHGA------ 111

Query: 330 IKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGD-DMITPLLFAAKH 388
                                                    I A    D  T       +
Sbjct: 112 ----------------------------------------AIFATTLSDGATAFEKCDPY 131

Query: 389 CD--LQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLL 446
            +     A YL     ++ L  +                 AL      +   E   L   
Sbjct: 132 REGYADCATYLADVEQSMGLMNSGA-------------VYALWDYSA-EFGDE---LSFR 174

Query: 447 HGADVN-DTSNKPKQKPLAVAIQSGDFQIV 475
            G  V     + P++     A   G    V
Sbjct: 175 EGESVTVLRRDGPEETDWWWAALHGQEGYV 204

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 63.0 bits (154), Expect = 3e-11
 Identities = 13/101 (12%), Positives = 25/101 (24%), Gaps = 3/101 (2%)

Query: 60  LCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDR 119
            C    +       +L       +         AL+    +     ++        V  R
Sbjct: 127 KCDPYREGYADCATYLADVEQ-SMGLMNSGAVYALWDYSAEFG-DELSFREGESVTVLRR 184

Query: 120 DEKGYTPLHLACYLGNKNIV-KFLLSKKADVRAKCSMMVTP 159
           D    T    A   G +  V +        V+ + S +   
Sbjct: 185 DGPEETDWWWAALHGQEGYVPRNYFGLFPRVKPQRSKVKHH 225

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  127 bits (322), Expect = 2e-33
 Identities = 41/235 (17%), Positives = 84/235 (35%), Gaps = 29/235 (12%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
             L      N  +     ++ G   V          L  + L+G + +V  +I+   + +
Sbjct: 7   VSLPPGKRTNLRKTGSERIAHGM-RVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPS 64

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTP-ILAVSANMSEDSTDTNE 176
             +++G T LH A   G+  IVKFL+    +V A  S   TP   A S N         +
Sbjct: 65  LPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCN-------NVQ 117

Query: 177 IISMLIENGANVREK--MPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLL 234
           +   L+E+GA V           +     + +      + L   +    ++ K     L 
Sbjct: 118 VCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALW 177

Query: 235 FFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFD 289
            +  +++              ++ + +GD  +++H+     +   ++    R  D
Sbjct: 178 DYEPQNDD-------------ELPMKEGDCMTIIHR----EDEDEIEWWWARLND 215

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  120 bits (302), Expect = 8e-31
 Identities = 38/179 (21%), Positives = 62/179 (34%), Gaps = 14/179 (7%)

Query: 52  AKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIH 111
              + L LL  +  + +   V+ ++   D D +    +G TAL+ A+  G  ++V  L+ 
Sbjct: 33  FNPLPLALLLDSSLEGEFDLVQRIIYEVD-DPSLPNDEGITALHNAVCAGHTEIVKFLVQ 91

Query: 112 HGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCS---MMVTPILAVSANMS 168
            G NVN  D  G+TPLH A    N  + KFL+   A V A                    
Sbjct: 92  FGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGY 151

Query: 169 EDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVK 227
                  +    L      +           L     + +    EL +K      +I +
Sbjct: 152 T------QCSQFLYGVQEKMGIMNKG-VIYALWDYEPQNDD---ELPMKEGDCMTIIHR 200

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  118 bits (298), Expect = 3e-30
 Identities = 38/228 (16%), Positives = 70/228 (30%), Gaps = 48/228 (21%)

Query: 89  DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKAD 148
            G+ +L       L K  +  I HG  V   +      L  +   G  ++V+ ++ +  D
Sbjct: 4   TGQVSLPPGKRTNLRKTGSERIAHGMRVK-FNPLPLALLLDSSLEGEFDLVQRIIYEVDD 62

Query: 149 VRAKCSMMVTP-ILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTD---FSPLHFAV 204
                   +T    AV A  +       EI+  L++ G NV       D   ++PLH A 
Sbjct: 63  PSLPNDEGITALHNAVCAGHT-------EIVKFLVQFGVNVNAA----DSDGWTPLHCAA 111

Query: 205 VKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDL 264
              N+ V + L++  A                             + +       SD   
Sbjct: 112 SCNNVQVCKFLVESGAA----------------------------VFAMT----YSDMQT 139

Query: 265 NSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHT 312
            +   +    G  Q  Q L   +  +   N+  +  ++          
Sbjct: 140 AADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDEL 187

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  105 bits (264), Expect = 9e-26
 Identities = 32/240 (13%), Positives = 59/240 (24%), Gaps = 63/240 (26%)

Query: 380 TPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIE 439
             L    +    ++    I  G  V       A               L  +   +   +
Sbjct: 7   VSLPPGKRTNLRKTGSERIAHGMRVKFNPLPLA--------------LLLDSSL-EGEFD 51

Query: 440 MVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE---- 495
           +V+ ++    D +   N      L  A+ +G  +IVK L  +G  ++      + +    
Sbjct: 52  LVQRIIYEVDDPS-LPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA----ADSDGWTP 106

Query: 496 ---AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRG 552
              AA                               N     K  +E GA V   +    
Sbjct: 107 LHCAA-----------------------------SCNNVQVCKFLVESGAAVFAMTYSDM 137

Query: 553 ---SALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGA 609
              +       +GY +    L      +   +     AL          N     +  G 
Sbjct: 138 QTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDY----EPQNDDELPMKEGD 193

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 89.6 bits (223), Expect = 3e-20
 Identities = 31/224 (13%), Positives = 58/224 (25%), Gaps = 65/224 (29%)

Query: 268 LHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVN 327
           L         +     +     +          +  +   G     + + ++ +      
Sbjct: 9   LPPGKRTNLRKTGSERIAHGMRVKFNPLPLAL-LLDSSLEG--EFDLVQRIIYEVD---- 61

Query: 328 LPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAK 387
                                                     + +   D+ IT L  A  
Sbjct: 62  ------------------------------------------DPSLPNDEGITALHNAVC 79

Query: 388 HCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLH 447
               +  K+L+Q G NVN           A  SD    + L  A    NN+++ K L+  
Sbjct: 80  AGHTEIVKFLVQFGVNVN-----------AADSD--GWTPLHCAA-SCNNVQVCKFLVES 125

Query: 448 GADVNDTSNKPKQK--PLAVAIQSGDFQIVKELQNYGAQIDKEN 489
           GA V   +    Q        ++ G  Q  + L     ++   N
Sbjct: 126 GAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMN 169

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 85.4 bits (212), Expect = 8e-19
 Identities = 40/241 (16%), Positives = 69/241 (28%), Gaps = 62/241 (25%)

Query: 234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQ 293
           L     +N  K       +    V  +   L +LL  +   G   +VQ ++    D +  
Sbjct: 9   LPPGKRTNLRKTGS-ERIAHGMRVKFNPLPL-ALLLDSSLEGEFDLVQRIIYEVDDPSLP 66

Query: 294 NRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQ 353
           N   +  +  A+  G  HT + ++L+Q                                 
Sbjct: 67  NDEGITALHNAVCAG--HTEIVKFLVQFGV------------------------------ 94

Query: 354 IKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAF 413
                           N+NA   D  TPL  AA   ++Q  K+L++ GA V         
Sbjct: 95  ----------------NVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVF-------- 130

Query: 414 ISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQ 473
                 SD    +        +   +  + L      +    NK     L       D +
Sbjct: 131 --AMTYSDMQTAADKCEEM-EEGYTQCSQFLYGVQEKMGIM-NKGVIYALWDYEPQNDDE 186

Query: 474 I 474
           +
Sbjct: 187 L 187

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 83.0 bits (206), Expect = 4e-18
 Identities = 29/179 (16%), Positives = 59/179 (32%), Gaps = 30/179 (16%)

Query: 462 PLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLD 521
            L    ++   +   E   +G ++    +     A  +  S                   
Sbjct: 8   SLPPGKRTNLRKTGSERIAHGMRV---KFNPLPLALLLDSS------------------- 45

Query: 522 FLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKS 581
                   ++D V++ I +    ++ ++   +AL      G+ EIV  L+  G +VN   
Sbjct: 46  -----LEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAAD 100

Query: 582 ATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKN--RDIIDLL 638
           + G+T LH A   ++   + + L+  GA          +T     E  +         L
Sbjct: 101 SDGWTPLHCAASCNNVQ-VCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 158

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 78.0 bits (193), Expect = 2e-16
 Identities = 32/236 (13%), Positives = 65/236 (27%), Gaps = 44/236 (18%)

Query: 359 QIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDAR 418
           +     I     +       +  LL ++   +    + +I +  + +L   +        
Sbjct: 19  KTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEG------- 70

Query: 419 SSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKEL 478
                  +AL  A     + E+VK L+  G +VN   +     PL  A    + Q+ K L
Sbjct: 71  ------ITALHNAV-CAGHTEIVKFLVQFGVNVNAADSD-GWTPLHCAASCNNVQVCKFL 122

Query: 479 QNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNI 538
              GA +    Y   + AA                            +        +   
Sbjct: 123 VESGAAVFAMTYSDMQTAADKCEE-----------------------MEEGYTQCSQFLY 159

Query: 539 EDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNF--KSATGFTALHMAC 592
                + + ++    AL     +  +E   L +  G  +    +          A 
Sbjct: 160 GVQEKMGIMNKGVIYALWDYEPQNDDE---LPMKEGDCMTIIHREDEDEIEWWWAR 212

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 48.4 bits (116), Expect = 3e-06
 Identities = 12/87 (13%), Positives = 25/87 (28%), Gaps = 16/87 (18%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
              C  + +   +  +FL       +    +    AL+    Q     + +       + 
Sbjct: 141 ADKCEEMEEGYTQCSQFLYGVQ-EKMGIMNKGVIYALWDYEPQN-DDELPMKEGDCMTII 198

Query: 118 DR--------------DEKGYTPLHLA 130
            R              D++GY P +L 
Sbjct: 199 HREDEDEIEWWWARLNDKEGYVPRNLL 225

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score =  116 bits (293), Expect = 1e-29
 Identities = 50/272 (18%), Positives = 89/272 (32%), Gaps = 73/272 (26%)

Query: 380 TPLLFAAKHCDLQS-AKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNI 438
           +PLL AAK  D+Q+ +K L  +G  V+                    +AL  A  + +N+
Sbjct: 5   SPLLLAAKENDVQALSKLLKFEGCEVHQR-------------GAMGETALHIAALY-DNL 50

Query: 439 EMVKLLLLHGADVNDTSNKPKQK----PLAVAIQSGDFQIVKELQNYGAQIDKENYLKNK 494
           E   +L+    ++       +       L +A+ + +  +V+ L   GA +      +  
Sbjct: 51  EAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSA----RAT 106

Query: 495 EAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSA 554
            +         +   +                                            
Sbjct: 107 GSVFHYRPHNLIYYGE------------------------------------------HP 124

Query: 555 LIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSND---NIVRKLLHHGAYY 611
           L + A  G EEIV LL+++GAD+  + + G T LH+     +      +   LL +    
Sbjct: 125 LSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGD 184

Query: 612 DMKDG-----KTGKTPLKHAEAGKNRDIIDLL 638
            +K         G TP K A    N  +   L
Sbjct: 185 HLKSLELVPNNQGLTPFKLAGVEGNIVMFQHL 216

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 41.1 bits (97), Expect = 6e-04
 Identities = 10/55 (18%), Positives = 20/55 (36%), Gaps = 1/55 (1%)

Query: 584 GFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
             + L +A + +    + + L   G     +    G+T L  A    N +   +L
Sbjct: 3   WESPLLLAAKENDVQALSKLLKFEGCEVHQRG-AMGETALHIAALYDNLEAAMVL 56

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  124 bits (313), Expect = 4e-33
 Identities = 37/164 (22%), Positives = 65/164 (39%), Gaps = 16/164 (9%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
             L  A     +  V+ L +    +  +      T L+ A       +V  L+ HGA+V+
Sbjct: 10  RQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVH 69

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTP-ILAVSANMSEDSTDTNE 176
            +D+ G  PLH AC  G+  + + L+   A V        TP   A +           E
Sbjct: 70  AKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKY-------E 122

Query: 177 IISMLIENGANVREKMPFTD---FSPLHFAVVKKNLSVVELLIK 217
           I  +L+++GA+  +K    +    +PL       +  + +LL  
Sbjct: 123 ICKLLLQHGADPTKK----NRDGNTPLDLV-KDGDTDIQDLLRG 161

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  115 bits (290), Expect = 6e-30
 Identities = 40/147 (27%), Positives = 59/147 (40%), Gaps = 19/147 (12%)

Query: 82  DVNEKLQDGRTALYMAILQGLYKMVTLLI-HHGANVNDRDEKGYTPLHLACYLGNKNIVK 140
             N    +    L  A   G  + V  L      N  D + +  TPLH A      ++V+
Sbjct: 3   MGNS---EADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVE 59

Query: 141 FLLSKKADVRAKCSMMVTP-ILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTD--- 196
           +LL   ADV AK    + P   A S           E+  +L+++GA V       D   
Sbjct: 60  YLLQHGADVHAKDKGGLVPLHNACSYG-------HYEVAELLVKHGAVVNVA----DLWK 108

Query: 197 FSPLHFAVVKKNLSVVELLIKCKADTN 223
           F+PLH A  K    + +LL++  AD  
Sbjct: 109 FTPLHEAAAKGKYEICKLLLQHGADPT 135

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 93.6 bits (234), Expect = 2e-22
 Identities = 43/178 (24%), Positives = 64/178 (35%), Gaps = 22/178 (12%)

Query: 113 GANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKK-ADVRAKCSMMVTP-ILAVSANMSED 170
           GA  N    +    L  A   G+   VK L + +  + R       TP   A   N    
Sbjct: 1   GAMGN---SEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRV-- 55

Query: 171 STDTNEIISMLIENGANVREKMPFTD---FSPLHFAVVKKNLSVVELLIKCKADTNLIVK 227
                 ++  L+++GA+V  K    D     PLH A    +  V ELL+K  A  N+   
Sbjct: 56  -----SVVEYLLQHGADVHAK----DKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADL 106

Query: 228 VNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVK 285
               P L  A      +I +  L     D +  + D N+ L      G+  I  +L  
Sbjct: 107 WKFTP-LHEAAAKGKYEICK-LLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRG 161

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 88.6 bits (221), Expect = 1e-20
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 2/90 (2%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
             L +A         E L+  G   VN       T L+ A  +G Y++  LL+ HGA+  
Sbjct: 77  VPLHNACSYGHYEVAELLVKHGA-VVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPT 135

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKA 147
            ++  G TPL L    G+ +I   L    A
Sbjct: 136 KKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 88.2 bits (220), Expect = 1e-20
 Identities = 45/193 (23%), Positives = 68/193 (35%), Gaps = 45/193 (23%)

Query: 425 RSALQYACKHKNNIEMVKLLL-LHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGA 483
              L  A K   ++E VK L  +   +  D     +  PL  A       +V+ L  +GA
Sbjct: 9   DRQLLEAAK-AGDVETVKKLCTVQSVNCRDI-EGRQSTPLHFAAGYNRVSVVEYLLQHGA 66

Query: 484 QIDKENYLKNKE-------AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKK 536
            +      K+K        A    H         ++ +LL                    
Sbjct: 67  DVHA----KDKGGLVPLHNACSYGH--------YEVAELL-------------------- 94

Query: 537 NIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHS 596
            ++ GA VNV+   + + L   A KG  EI  LLL +GAD   K+  G T L +      
Sbjct: 95  -VKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVK--DG 151

Query: 597 NDNIVRKLLHHGA 609
           + +I   L    A
Sbjct: 152 DTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 82.8 bits (206), Expect = 9e-19
 Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 3/101 (2%)

Query: 538 IEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSN 597
           ++ GA V+   +     L      G+ E+ +LL+ +GA VN      FT LH A      
Sbjct: 62  LQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKY 121

Query: 598 DNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
           + I + LL HGA    K+ + G TPL       + DI DLL
Sbjct: 122 E-ICKLLLQHGADPTKKN-RDGNTPL-DLVKDGDTDIQDLL 159

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 81.3 bits (202), Expect = 3e-18
 Identities = 37/216 (17%), Positives = 71/216 (32%), Gaps = 63/216 (29%)

Query: 234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQ 293
           L  A ++  V+ V+     ++ +    +G  ++ LH A     + +V+ L++   D++A+
Sbjct: 12  LLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAK 71

Query: 294 NRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQ 353
           ++  L P+  A   G  H  VAE L++  +                              
Sbjct: 72  DKGGLVPLHNACSYG--HYEVAELLVKHGA------------------------------ 99

Query: 354 IKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAF 413
                            +N       TPL  AA     +  K L+Q GA+          
Sbjct: 100 ----------------VVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPT-------- 135

Query: 414 ISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGA 449
               ++ D    + L        + ++  LL    A
Sbjct: 136 ---KKNRD--GNTPLDLVK--DGDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 80.1 bits (199), Expect = 9e-18
 Identities = 37/120 (30%), Positives = 52/120 (43%), Gaps = 15/120 (12%)

Query: 370 NINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQ 429
           N         TPL FAA +  +   +YL+Q GA+V+             + D      L 
Sbjct: 34  NCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVH-------------AKDKGGLVPLH 80

Query: 430 YACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
            AC    + E+ +LL+ HGA VN      K  PL  A   G ++I K L  +GA   K+N
Sbjct: 81  NAC-SYGHYEVAELLVKHGAVVNVADLW-KFTPLHEAAAKGKYEICKLLLQHGADPTKKN 138

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 80.1 bits (199), Expect = 9e-18
 Identities = 46/224 (20%), Positives = 75/224 (33%), Gaps = 65/224 (29%)

Query: 261 DGDLNSLLHKACHVGNLQIVQMLVKRK-FDINAQNRYFLPPMFFAIGMGRKHTHVAEYLL 319
           + + +  L +A   G+++ V+ L   +  +          P+ FA G       V EYLL
Sbjct: 5   NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYN--RVSVVEYLL 62

Query: 320 QQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMI 379
           Q  +                                              +++A+    +
Sbjct: 63  QHGA----------------------------------------------DVHAKDKGGL 76

Query: 380 TPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIE 439
            PL  A  +   + A+ L++ GA VN              +D    + L  A   K   E
Sbjct: 77  VPLHNACSYGHYEVAELLVKHGAVVN-------------VADLWKFTPLHEAAA-KGKYE 122

Query: 440 MVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGA 483
           + KLLL HGAD     N+    PL +  + GD  I   L+   A
Sbjct: 123 ICKLLLQHGADPTKK-NRDGNTPLDLV-KDGDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 79.4 bits (197), Expect = 2e-17
 Identities = 46/208 (22%), Positives = 75/208 (36%), Gaps = 48/208 (23%)

Query: 370 NINAEGDDMITPLLFAAKHCDLQSAKYLI-QKGANVNLTETQKAFISDARSSDFCFRSAL 428
             N+E D     LL AAK  D+++ K L   +  N                 +    + L
Sbjct: 3   MGNSEAD---RQLLEAAKAGDVETVKKLCTVQSVNCR-------------DIEGRQSTPL 46

Query: 429 QYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKE 488
            +A  + N + +V+ LL HGADV+   +K    PL  A   G +++ + L  +GA ++  
Sbjct: 47  HFAAGY-NRVSVVEYLLQHGADVHAK-DKGGLVPLHNACSYGHYEVAELLVKHGAVVNVA 104

Query: 489 NYLKNKEAA-RIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVS 547
           +    K      A                             KY+  K  ++ GA     
Sbjct: 105 D--LWKFTPLHEA-------------------------AAKGKYEICKLLLQHGADPTKK 137

Query: 548 SERRGSALIYVAWKGYEEIVDLLLDNGA 575
           +    + L  V   G  +I DLL  + A
Sbjct: 138 NRDGNTPLDLVK-DGDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 78.2 bits (194), Expect = 5e-17
 Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 3/114 (2%)

Query: 526 VRSNKYDEVKKNIEDGAC-VNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATG 584
            ++   + VKK     +        R+ + L + A      +V+ LL +GADV+ K   G
Sbjct: 16  AKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGG 75

Query: 585 FTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
              LH AC +   + +   L+ HGA  ++ D     TPL  A A    +I  LL
Sbjct: 76  LVPLHNACSYGHYE-VAELLVKHGAVVNVAD-LWKFTPLHEAAAKGKYEICKLL 127

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 63.6 bits (156), Expect = 5e-12
 Identities = 28/99 (28%), Positives = 39/99 (39%), Gaps = 6/99 (6%)

Query: 541 GACVNVSSERRGSALIYVAWKGYEEIVDLLLD-NGADVNFKSATGFTALHMACRFHSNDN 599
           GA  N         L+  A  G  E V  L      +         T LH A  ++    
Sbjct: 1   GAMGN---SEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVS- 56

Query: 600 IVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
           +V  LL HGA    KD K G  PL +A +  + ++ +LL
Sbjct: 57  VVEYLLQHGADVHAKD-KGGLVPLHNACSYGHYEVAELL 94

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  124 bits (314), Expect = 8e-33
 Identities = 41/203 (20%), Positives = 85/203 (41%), Gaps = 14/203 (6%)

Query: 89  DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKAD 148
           +    L  A  +   K+  +L      V++ D +G TPL++A +  +  I K L+ + AD
Sbjct: 5   EVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD 64

Query: 149 VRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGA-NVREKMPFTDFSPLHFAVVKK 207
           +  + S+  +P L   A          EI++ ++++   ++ +   +   + L  A  K 
Sbjct: 65  INLQNSISDSPYLYAGAQGRT------EILAYMLKHATPDLNKHNRY-GGNALIPAAEKG 117

Query: 208 NLSVVELLIKC-KADTNLIVKVNQEPLLFFAIESNSVK----IVEAFLNSKNFDVSISDG 262
           ++  V+LL++  + D +         L+         +    IV+  L     D SI D 
Sbjct: 118 HIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVK-LLMENGADQSIKDN 176

Query: 263 DLNSLLHKACHVGNLQIVQMLVK 285
              + +  A   G  +I ++L +
Sbjct: 177 SGRTAMDYANQKGYTEISKILAQ 199

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  117 bits (296), Expect = 2e-30
 Identities = 38/207 (18%), Positives = 83/207 (40%), Gaps = 23/207 (11%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
            LL +A   +  +  E L  T    V+E   +G T L +A+     ++   LI  GA++N
Sbjct: 8   ALLEAANQRDTKKVKEILQDTTY-QVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADIN 66

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKA-DVRAKCSMMVTPILAVSANMSEDSTDTNE 176
            ++    +P   A   G   I+ ++L     D+          ++  +           +
Sbjct: 67  LQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHI------D 120

Query: 177 IISMLIENG-ANVREKMPFTD---FSPLHFAVVKKN-----LSVVELLIKCKADTNLIVK 227
            + +L+E+G  ++  +    +   ++ L  AV  +        +V+LL++  AD ++   
Sbjct: 121 NVKLLLEDGREDIDFQ----NDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDN 176

Query: 228 VNQEPLLFFAIESNSVKIVEAFLNSKN 254
             +   + +A +    +I +  L   N
Sbjct: 177 SGRTA-MDYANQKGYTEISK-ILAQYN 201

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  105 bits (265), Expect = 3e-26
 Identities = 48/221 (21%), Positives = 97/221 (43%), Gaps = 37/221 (16%)

Query: 425 RSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQ 484
            + L+ A + ++  ++ ++L      V++  +     PL +A+ + D +I K L + GA 
Sbjct: 7   GALLEAANQ-RDTKKVKEILQDTTYQVDEV-DTEGNTPLNIAVHNNDIEIAKALIDRGAD 64

Query: 485 IDKENYLKNKEAA-RIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGAC 543
           I+ +N     ++    A                             + + +   ++    
Sbjct: 65  INLQN--SISDSPYLYA-------------------------GAQGRTEILAYMLKHATP 97

Query: 544 -VNVSSERRGSALIYVAWKGYEEIVDLLLDNG-ADVNFKSATGFTALHMACRFHSNDN-- 599
            +N  +   G+ALI  A KG+ + V LLL++G  D++F++  G+TAL  A      +   
Sbjct: 98  DLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLY 157

Query: 600 --IVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
             IV+ L+ +GA   +KD  +G+T + +A      +I  +L
Sbjct: 158 QDIVKLLMENGADQSIKD-NSGRTAMDYANQKGYTEISKIL 197

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  103 bits (259), Expect = 2e-25
 Identities = 38/210 (18%), Positives = 75/210 (35%), Gaps = 16/210 (7%)

Query: 119 RDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEII 178
           +  +    L  A     K + + L      V    +   TP+     N         EI 
Sbjct: 2   KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDI------EIA 55

Query: 179 SMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKA-DTNLIVKVNQEPLLFFA 237
             LI+ GA++  +      SP  +A  +    ++  ++K    D N   +      L  A
Sbjct: 56  KALIDRGADINLQNSI-SDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNA-LIPA 113

Query: 238 IESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHV-----GNLQIVQMLVKRKFDINA 292
            E   +  V+  L     D+   +    + L +A  +         IV++L++   D + 
Sbjct: 114 AEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSI 173

Query: 293 QNRYFLPPMFFAIGMGRKHTHVAEYLLQQD 322
           ++      M +A   G  +T +++ L Q +
Sbjct: 174 KDNSGRTAMDYANQKG--YTEISKILAQYN 201

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 94.8 bits (237), Expect = 2e-22
 Identities = 50/241 (20%), Positives = 84/241 (34%), Gaps = 61/241 (25%)

Query: 380 TPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIE 439
             L  A +    +  + L      V+               D    + L  A  H N+IE
Sbjct: 8   ALLEAANQRDTKKVKEILQDTTYQVD-------------EVDTEGNTPLNIAV-HNNDIE 53

Query: 440 MVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE---- 495
           + K L+  GAD+N  ++     P   A   G  +I+  +  +    D      N+     
Sbjct: 54  IAKALIDRGADINLQNSI-SDSPYLYAGAQGRTEILAYMLKHAT-PDLN--KHNRYGGNA 109

Query: 496 ---AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDG-ACVNVSSERR 551
              AA   H             LL                     +EDG   ++  ++  
Sbjct: 110 LIPAAEKGH--------IDNVKLL---------------------LEDGREDIDFQNDFG 140

Query: 552 GSALIYVAW-----KGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLH 606
            +ALI         + Y++IV LL++NGAD + K  +G TA+  A +    + I + L  
Sbjct: 141 YTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTE-ISKILAQ 199

Query: 607 H 607
           +
Sbjct: 200 Y 200

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 85.6 bits (213), Expect = 3e-19
 Identities = 50/255 (19%), Positives = 90/255 (35%), Gaps = 67/255 (26%)

Query: 229 NQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKF 288
               LL  A + ++ K+ E  L    + V   D + N+ L+ A H  +++I + L+ R  
Sbjct: 5   EVGALLEAANQRDTKKVKE-ILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGA 63

Query: 289 DINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKV 348
           DIN QN     P  +A   G   T +  Y+L+  + +                       
Sbjct: 64  DINLQNSISDSPYLYAGAQG--RTEILAYMLKHATPD----------------------- 98

Query: 349 MSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKG-ANVNLT 407
                                 +N         L+ AA+   + + K L++ G  +++  
Sbjct: 99  ----------------------LNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDID-- 134

Query: 408 ETQKAFISDARSSDFCFRSALQYACKH----KNNIEMVKLLLLHGADVNDTSNKPKQKPL 463
                        +    +AL  A       +   ++VKLL+ +GAD +   N   +  +
Sbjct: 135 -----------FQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNS-GRTAM 182

Query: 464 AVAIQSGDFQIVKEL 478
             A Q G  +I K L
Sbjct: 183 DYANQKGYTEISKIL 197

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 81.3 bits (202), Expect = 8e-18
 Identities = 50/218 (22%), Positives = 82/218 (37%), Gaps = 44/218 (20%)

Query: 359 QIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDAR 418
           ++ + + D T  ++    +  TPL  A  + D++ AK LI +GA++NL            
Sbjct: 20  KVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQ----------- 68

Query: 419 SSDFCFRSALQYACKHKNNIEMVKLLLLHGA-DVNDTSNKPKQKPLAVAIQSGDFQIVKE 477
             +    S   YA   +   E++  +L H   D+N   N+     L  A + G    VK 
Sbjct: 69  --NSISDSPYLYAGA-QGRTEILAYMLKHATPDLNKH-NRYGGNALIPAAEKGHIDNVKL 124

Query: 478 LQNYG-AQIDKENYLKN---KEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDE 533
           L   G   ID +N        EA  +       +  + I  LL                 
Sbjct: 125 LLEDGREDIDFQNDFGYTALIEAVGLREGN---QLYQDIVKLL----------------- 164

Query: 534 VKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLL 571
               +E+GA  ++      +A+ Y   KGY EI  +L 
Sbjct: 165 ----MENGADQSIKDNSGRTAMDYANQKGYTEISKILA 198

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 79.4 bits (197), Expect = 4e-17
 Identities = 35/238 (14%), Positives = 74/238 (31%), Gaps = 70/238 (29%)

Query: 259 ISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYL 318
           +   ++ +LL  A      ++ ++L    + ++  +     P+  A+        +A+ L
Sbjct: 1   MKTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNN--DIEIAKAL 58

Query: 319 LQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDM 378
           + + +                                              +IN +    
Sbjct: 59  IDRGA----------------------------------------------DINLQNSIS 72

Query: 379 ITPLLFAAKHCDLQSAKYLIQKGA-NVNLTETQKAFISDARSSDFCFRSALQYACKHKNN 437
            +P L+A      +   Y+++    ++N                    +AL  A +   +
Sbjct: 73  DSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYG-------------GNALIPAAEK-GH 118

Query: 438 IEMVKLLLLHG-ADVNDTSNKPKQKPLAVAIQSGDFQ-----IVKELQNYGAQIDKEN 489
           I+ VKLLL  G  D++   N      L  A+   +       IVK L   GA    ++
Sbjct: 119 IDNVKLLLEDGREDIDFQ-NDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKD 175

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  123 bits (312), Expect = 1e-32
 Identities = 39/166 (23%), Positives = 68/166 (40%), Gaps = 14/166 (8%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           T L  A        ++ L+   D  + +K  +G TAL  A+      +   L+  G+NVN
Sbjct: 37  TPLMVACMLGMENAIDKLVENFD-KLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVN 95

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEI 177
            +D  G TPL  +   G   +  FLL   A+V  +     TP++  S           EI
Sbjct: 96  TKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRS------EI 149

Query: 178 ISMLIENGANVREKMPFTD---FSPLHFAVVKKNLSVVELLIKCKA 220
           +  L+E GA++  +    D    +    A +     V+++  + + 
Sbjct: 150 VKKLLELGADISAR----DLTGLTAEASARIFGRQEVIKIFTEVRR 191

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  120 bits (304), Expect = 1e-31
 Identities = 42/192 (21%), Positives = 75/192 (39%), Gaps = 22/192 (11%)

Query: 66  DNKIREVEFLLS------TGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDR 119
           D     VE +          D   N +    RT L +A + G+   +  L+ +   + D+
Sbjct: 5   DKNGEIVEKIKDEKSINQNLDFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDK 64

Query: 120 DEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTP-ILAVSANMSEDSTDTNEII 178
           D +G T L  A       I + LLSK ++V  K     TP + ++    S       E+ 
Sbjct: 65  DIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYS-------EMS 117

Query: 179 SMLIENGANVREKMPFTD---FSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLF 235
             L+E+GANV ++    +    +PL  A       +V+ L++  AD +            
Sbjct: 118 YFLLEHGANVNDR----NLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTA-EA 172

Query: 236 FAIESNSVKIVE 247
            A      ++++
Sbjct: 173 SARIFGRQEVIK 184

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  107 bits (269), Expect = 8e-27
 Identities = 43/236 (18%), Positives = 81/236 (34%), Gaps = 50/236 (21%)

Query: 84  NEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLL 143
           +   ++G     +   + + + +  L       N RD    TPL +AC LG +N +  L+
Sbjct: 2   SHMDKNGEIVEKIKDEKSINQNLDFLR------NYRDSYNRTPLMVACMLGMENAIDKLV 55

Query: 144 SKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFA 203
                +  K     T ++    N          I   L+  G+NV  K      +PL ++
Sbjct: 56  ENFDKLEDKDIEGSTALIWAVKNNRL------GIAEKLLSKGSNVNTKDFS-GKTPLMWS 108

Query: 204 VVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGD 263
           ++     +   L++  A+                            +N +N      +G 
Sbjct: 109 IIFGYSEMSYFLLEHGAN----------------------------VNDRN-----LEG- 134

Query: 264 LNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLL 319
             + L  A   G  +IV+ L++   DI+A++   L     A   G     V +   
Sbjct: 135 -ETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFG--RQEVIKIFT 187

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 90.9 bits (227), Expect = 4e-21
 Identities = 43/250 (17%), Positives = 82/250 (32%), Gaps = 70/250 (28%)

Query: 229 NQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKF 288
           N E +     E +  + ++   N ++     S     + L  AC +G    +  LV+   
Sbjct: 7   NGEIVEKIKDEKSINQNLDFLRNYRD-----SYN--RTPLMVACMLGMENAIDKLVENFD 59

Query: 289 DINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKV 348
            +  ++      + +A+        +AE LL + S                         
Sbjct: 60  KLEDKDIEGSTALIWAVKNN--RLGIAEKLLSKGS------------------------- 92

Query: 349 MSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTE 408
                                N+N +     TPL+++      + + +L++ GANVN   
Sbjct: 93  ---------------------NVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVN--- 128

Query: 409 TQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQ 468
                       +    + L  A K+    E+VK LL  GAD++   +       A A  
Sbjct: 129 ----------DRNLEGETPLIVASKY-GRSEIVKKLLELGADISAR-DLTGLTAEASARI 176

Query: 469 SGDFQIVKEL 478
            G  +++K  
Sbjct: 177 FGRQEVIKIF 186

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 89.8 bits (224), Expect = 9e-21
 Identities = 37/241 (15%), Positives = 78/241 (32%), Gaps = 53/241 (21%)

Query: 370 NINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQ 429
           +++  G+          +    Q+  +L     + N T                    L 
Sbjct: 3   HMDKNGE---IVEKIKDEKSINQNLDFLRNYRDSYNRT-------------------PLM 40

Query: 430 YACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
            AC        +  L+ +   + D  +      L  A+++    I ++L + G+ ++ ++
Sbjct: 41  VACM-LGMENAIDKLVENFDKLEDK-DIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKD 98

Query: 490 YLKNKEAA-RIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSS 548
              + +     +                         +     +     +E GA VN  +
Sbjct: 99  --FSGKTPLMWS-------------------------IIFGYSEMSYFLLEHGANVNDRN 131

Query: 549 ERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHG 608
               + LI  +  G  EIV  LL+ GAD++ +  TG TA   A  F   + +++      
Sbjct: 132 LEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQE-VIKIFTEVR 190

Query: 609 A 609
            
Sbjct: 191 R 191

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 79.4 bits (197), Expect = 4e-17
 Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 15/137 (10%)

Query: 515 LLKLNLDFLKN-------------VRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWK 561
            +  NLDFL+N                   + + K +E+   +        +ALI+    
Sbjct: 19  SINQNLDFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKN 78

Query: 562 GYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKT 621
               I + LL  G++VN K  +G T L  +  F  ++ +   LL HGA  + ++   G+T
Sbjct: 79  NRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSE-MSYFLLEHGANVNDRN-LEGET 136

Query: 622 PLKHAEAGKNRDIIDLL 638
           PL  A      +I+  L
Sbjct: 137 PLIVASKYGRSEIVKKL 153

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  120 bits (303), Expect = 6e-32
 Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 11/159 (6%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
             L  A    +  EV  L++ G          G + L++A   G +    +L+  G + +
Sbjct: 4   KKLLEAARAGQDDEVRILMANG-APFTTD-WLGTSPLHLAAQYGHFSTTEVLLRAGVSRD 61

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTP-ILAVSANMSEDSTDTNE 176
            R +   TPLH+A   G+ NIV+ LL   ADV AK  + +T    A   N         E
Sbjct: 62  ARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHN-------HQE 114

Query: 177 IISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELL 215
           ++ +LI+ GA+V  +  F   +    ++   N  + E+L
Sbjct: 115 VVELLIKYGADVHTQSKF-CKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  114 bits (289), Expect = 6e-30
 Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 17/163 (10%)

Query: 89  DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKAD 148
           D    L  A   G    V +L+ +GA     D  G +PLHLA   G+ +  + LL     
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS 59

Query: 149 VRAKCSMMVTP-ILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTD---FSPLHFAV 204
             A+  +  TP  +A S            I+ +L+++GA+V  K    D    + LH+A 
Sbjct: 60  RDARTKVDRTPLHMAASEG-------HANIVEVLLKHGADVNAK----DMLKMTALHWAT 108

Query: 205 VKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVE 247
              +  VVELLIK  AD +   K  +      +I++ +  + E
Sbjct: 109 EHNHQEVVELLIKYGADVHTQSKFCKTA-FDISIDNGNEDLAE 150

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 88.2 bits (220), Expect = 1e-20
 Identities = 35/162 (21%), Positives = 60/162 (37%), Gaps = 12/162 (7%)

Query: 123 GYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTP-ILAVSANMSEDSTDTNEIISML 181
               L  A   G  + V+ L++  A          +P  LA                 +L
Sbjct: 2   LGKKLLEAARAGQDDEVRILMANGAPFTTDWLGT-SPLHLAAQYGH-------FSTTEVL 53

Query: 182 IENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESN 241
           +  G +   +    D +PLH A  + + ++VE+L+K  AD N    +     L +A E N
Sbjct: 54  LRAGVSRDARTKV-DRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTA-LHWATEHN 111

Query: 242 SVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQML 283
             ++VE  L     DV        +    +   GN  + ++L
Sbjct: 112 HQEVVE-LLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 84.4 bits (210), Expect = 2e-19
 Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 33/182 (18%)

Query: 460 QKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKN--KEAARIAHSTTELEERKKINDLLK 517
            K L  A ++G    V+ L   GA    +    +    AA+  H            ++L 
Sbjct: 3   GKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGH--------FSTTEVL- 53

Query: 518 LNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADV 577
                               +  G   +  ++   + L   A +G+  IV++LL +GADV
Sbjct: 54  --------------------LRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADV 93

Query: 578 NFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDL 637
           N K     TALH A   +  + +V  L+ +GA    +  K  KT    +    N D+ ++
Sbjct: 94  NAKDMLKMTALHWATEHNHQE-VVELLIKYGADVHTQS-KFCKTAFDISIDNGNEDLAEI 151

Query: 638 LH 639
           L 
Sbjct: 152 LQ 153

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 78.2 bits (194), Expect = 3e-17
 Identities = 44/217 (20%), Positives = 74/217 (34%), Gaps = 64/217 (29%)

Query: 263 DLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQD 322
           DL   L +A   G    V++L+         +     P+  A   G  H    E LL+  
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFTT-DWLGTSPLHLAAQYG--HFSTTEVLLRAG 57

Query: 323 SINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPL 382
                                                          + +A      TPL
Sbjct: 58  V----------------------------------------------SRDARTKVDRTPL 71

Query: 383 LFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVK 442
             AA        + L++ GA+VN             + D    +AL +A +H N+ E+V+
Sbjct: 72  HMAASEGHANIVEVLLKHGADVN-------------AKDMLKMTALHWATEH-NHQEVVE 117

Query: 443 LLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQ 479
           LL+ +GADV+  S    +    ++I +G+  + + LQ
Sbjct: 118 LLIKYGADVHTQSKF-CKTAFDISIDNGNEDLAEILQ 153

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 77.4 bits (192), Expect = 6e-17
 Identities = 39/195 (20%), Positives = 69/195 (35%), Gaps = 44/195 (22%)

Query: 377 DMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKN 436
           D+   LL AA+       + L+  GA                 +D+   S L  A ++  
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFT--------------TDWLGTSPLHLAAQY-G 45

Query: 437 NIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEA 496
           +    ++LL  G   +    K  + PL +A   G   IV+ L  +GA ++ ++    K  
Sbjct: 46  HFSTTEVLLRAGVSRDAR-TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKD--MLKMT 102

Query: 497 A-RIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSAL 555
           A   A                            N  + V+  I+ GA V+  S+   +A 
Sbjct: 103 ALHWA-------------------------TEHNHQEVVELLIKYGADVHTQSKFCKTAF 137

Query: 556 IYVAWKGYEEIVDLL 570
                 G E++ ++L
Sbjct: 138 DISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 70.9 bits (175), Expect = 1e-14
 Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 16/120 (13%)

Query: 370 NINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQ 429
               +     +PL  AA++    + + L++ G + +             +     R+ L 
Sbjct: 27  PFTTDWLGT-SPLHLAAQYGHFSTTEVLLRAGVSRD-------------ARTKVDRTPLH 72

Query: 430 YACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
            A   + +  +V++LL HGADVN      K   L  A +    ++V+ L  YGA +  ++
Sbjct: 73  MAA-SEGHANIVEVLLKHGADVNAKDML-KMTALHWATEHNHQEVVELLIKYGADVHTQS 130

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  118 bits (298), Expect = 6e-31
 Identities = 35/187 (18%), Positives = 63/187 (33%), Gaps = 17/187 (9%)

Query: 50  SSAKSVELTLLCSAVWDNKIREVEFLLSTGD--HDVNEKLQDGRTALYMAILQGLYKMVT 107
           S+A S E   + +A       +   L   G    +   K       L     +  YK+  
Sbjct: 1   SNAMS-EYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISM 59

Query: 108 LLIHHGANVNDRDEKGYTPLHLACYLGNKNI------VKFLLSKKADVRAKCSMMVTPIL 161
            LI+ GA++  R ++G T        G  +I       K  L K AD+ A        + 
Sbjct: 60  FLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVF 119

Query: 162 AVSANMSEDSTDTNEIISMLI-ENGANVREKMPFTD---FSPLHFAVVKKNLSVVELLIK 217
               N   D  +   +  ++  ++G  +  K    D    + L F    +    ++++  
Sbjct: 120 KNIFNYFVDENEMIPLYKLIFSQSGLQLLIK----DKWGLTALEFVKRCQKPIALKMMED 175

Query: 218 CKADTNL 224
                NL
Sbjct: 176 YIKKYNL 182

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  108 bits (272), Expect = 2e-27
 Identities = 28/213 (13%), Positives = 58/213 (27%), Gaps = 38/213 (17%)

Query: 88  QDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEK---GYTPLHLACYLGNKNIVKFLLS 144
                 +  A + G Y+    L   G    +   K    Y  L          I  FL++
Sbjct: 4   MSEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLIN 63

Query: 145 KKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFS---PLH 201
           K AD++++     T    +      D T T E+  + +E GA++              + 
Sbjct: 64  KGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITAL----YKPYKIVVF 119

Query: 202 FAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISD 261
             +    +   E++                             + +   +     + I D
Sbjct: 120 KNIFNYFVDENEMIP----------------------------LYKLIFSQSGLQLLIKD 151

Query: 262 GDLNSLLHKACHVGNLQIVQMLVKRKFDINAQN 294
               + L           ++M+       N + 
Sbjct: 152 KWGLTALEFVKRCQKPIALKMMEDYIKKYNLKE 184

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 85.9 bits (213), Expect = 1e-19
 Identities = 27/192 (14%), Positives = 54/192 (28%), Gaps = 36/192 (18%)

Query: 459 KQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKL 518
           + + ++ A   G ++   EL   G +  +                   E R KI+  L  
Sbjct: 6   EYRTVSAAAMLGTYEDFLELFEKGYEDKESV--LKSNILYDVLRNNNDEARYKISMFL-- 61

Query: 519 NLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYE------EIVDLLLD 572
                              I  GA +   ++   +    +   G        E+  + L+
Sbjct: 62  -------------------INKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLE 102

Query: 573 NGADVNFKSATGFTALHMACRFHSNDNIVRK------LLHHGAYYDMKDGKTGKTPLKHA 626
            GAD+          +      +  D               G    +KD K G T L+  
Sbjct: 103 KGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKD-KWGLTALEFV 161

Query: 627 EAGKNRDIIDLL 638
           +  +    + ++
Sbjct: 162 KRCQKPIALKMM 173

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 85.1 bits (211), Expect = 3e-19
 Identities = 22/130 (16%), Positives = 42/130 (32%), Gaps = 9/130 (6%)

Query: 526 VRSNKYDEVKKNIEDGACVNVSSERRG---SALIYVAWKGYEEIVDLLLDNGADVNFKSA 582
                Y++  +  E G     S  +       L     +   +I   L++ GAD+  ++ 
Sbjct: 14  AMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTK 73

Query: 583 TGFTALHMACRFHSND-----NIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDL 637
            G T      +   ND      + +  L  GA       K  K  +         D  ++
Sbjct: 74  EGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALY-KPYKIVVFKNIFNYFVDENEM 132

Query: 638 LHLIDNLFAS 647
           + L   +F+ 
Sbjct: 133 IPLYKLIFSQ 142

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 82.8 bits (205), Expect = 2e-18
 Identities = 11/88 (12%), Positives = 23/88 (26%), Gaps = 8/88 (9%)

Query: 72  VEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMV-------TLLIHHGANVNDRDEKGY 124
            +  L  G  D+    +  +  ++  I                +    G  +  +D+ G 
Sbjct: 97  CKIFLEKG-ADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGL 155

Query: 125 TPLHLACYLGNKNIVKFLLSKKADVRAK 152
           T L           +K +         K
Sbjct: 156 TALEFVKRCQKPIALKMMEDYIKKYNLK 183

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 81.6 bits (202), Expect = 4e-18
 Identities = 26/207 (12%), Positives = 57/207 (27%), Gaps = 45/207 (21%)

Query: 425 RSALQYACKHKNNIEMVKLLLLHGADVNDTSNK--PKQKPLAVAIQSGDFQIVKELQNYG 482
              +  A       E    L   G +  ++  K       L        ++I   L N G
Sbjct: 7   YRTVSAAAM-LGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKG 65

Query: 483 AQIDKENYLKNKE-------AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVK 535
           A I      + KE         +      ++    ++  +                    
Sbjct: 66  ADIKS----RTKEGTTLFFPLFQGGG--NDITGTTELCKIF------------------- 100

Query: 536 KNIEDGACVNVSSERRGSALIYVAWKGYEEIVD-------LLLDNGADVNFKSATGFTAL 588
             +E GA +    +     +    +  + +  +       +   +G  +  K   G TAL
Sbjct: 101 --LEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTAL 158

Query: 589 HMACRFHSNDNIVRKLLHHGAYYDMKD 615
               R       ++ +  +   Y++K+
Sbjct: 159 EFVKRCQKPI-ALKMMEDYIKKYNLKE 184

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 79.7 bits (197), Expect = 3e-17
 Identities = 26/210 (12%), Positives = 51/210 (24%), Gaps = 43/210 (20%)

Query: 380 TPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIE 439
             +  AA     +    L +KG     +  +                 L+         +
Sbjct: 8   RTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNI----------LYDVLRNNNDE-ARYK 56

Query: 440 MVKLLLLHGADVNDTSNKPKQKPLAVAIQSG------DFQIVKELQNYGAQIDKENYLKN 493
           +   L+  GAD+     K          Q G        ++ K     GA I        
Sbjct: 57  ISMFLINKGADIKSR-TKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYK 115

Query: 494 ---KEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSER 550
               +         +  E   +  L+                      + G  + +  + 
Sbjct: 116 IVVFKNIFNYF--VDENEMIPLYKLI--------------------FSQSGLQLLIKDKW 153

Query: 551 RGSALIYVAWKGYEEIVDLLLDNGADVNFK 580
             +AL +V        + ++ D     N K
Sbjct: 154 GLTALEFVKRCQKPIALKMMEDYIKKYNLK 183

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 73.6 bits (181), Expect = 3e-15
 Identities = 23/269 (8%), Positives = 59/269 (21%), Gaps = 95/269 (35%)

Query: 195 TDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKN 254
           +++  +  A +         L +   +      V +  +L+                   
Sbjct: 5   SEYRTVSAAAMLGTYEDFLELFEKGYEDK--ESVLKSNILYDV----------------- 45

Query: 255 FDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHV 314
                        L         +I   L+ +  DI ++ +      F     G      
Sbjct: 46  -------------LRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGND--- 89

Query: 315 AEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAE 374
                                                  I    ++ K  +++  +I A 
Sbjct: 90  ---------------------------------------ITGTTELCKIFLEKGADITAL 110

Query: 375 GDDMITPLLFAAKHCDLQSAK-------YLIQKGANVNLTETQKAFISDARSSDFCFRSA 427
                  +     +  +   +          Q G  + +              D    +A
Sbjct: 111 YKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIK-------------DKWGLTA 157

Query: 428 LQYACKHKNNIEMVKLLLLHGADVNDTSN 456
           L++  +       +K++  +    N   N
Sbjct: 158 LEFVKR-CQKPIALKMMEDYIKKYNLKEN 185

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 55.8 bits (135), Expect = 4e-09
 Identities = 8/70 (11%), Positives = 24/70 (34%), Gaps = 6/70 (8%)

Query: 58  TLLCSAVWDNKIRE------VEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIH 111
            ++   +++  + E       + + S     +  K + G TAL           + ++  
Sbjct: 116 IVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMED 175

Query: 112 HGANVNDRDE 121
           +    N ++ 
Sbjct: 176 YIKKYNLKEN 185

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  116 bits (294), Expect = 7e-31
 Identities = 24/141 (17%), Positives = 49/141 (34%), Gaps = 7/141 (4%)

Query: 81  HDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVK 140
             ++         L  A  +G  + V  L+  GA+ N  +  G  P+ +    G+  + +
Sbjct: 3   PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAE 61

Query: 141 FLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPL 200
            LL   A+        +T  +  +A   E      + + +L   GA +     +    P+
Sbjct: 62  LLLLHGAEPNCADPATLTRPVHDAA--REGFL---DTLVVLHRAGARLDVCDAW-GRLPV 115

Query: 201 HFAVVKKNLSVVELLIKCKAD 221
             A  + +  +   L     D
Sbjct: 116 DLAEEQGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 98.7 bits (247), Expect = 1e-24
 Identities = 28/131 (21%), Positives = 46/131 (35%), Gaps = 9/131 (6%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
             L +A    ++  V  LL  G  D N   + GR  + + +  G  ++  LL+ HGA  N
Sbjct: 14  AGLATAAARGQVETVRQLLEAGA-DPNALNRFGRRPIQVMM-MGSAQVAELLLLHGAEPN 71

Query: 118 DRDEKGYT-PLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNE 176
             D    T P+H A   G  + +  L    A +    +    P+               +
Sbjct: 72  CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHR------D 125

Query: 177 IISMLIENGAN 187
           I   L     +
Sbjct: 126 IARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 97.5 bits (244), Expect = 3e-24
 Identities = 26/175 (14%), Positives = 47/175 (26%), Gaps = 44/175 (25%)

Query: 113 GANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTP-ILAVSANMSEDS 171
              ++         L  A   G    V+ LL   AD  A       P  + +  +     
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMMGSA---- 57

Query: 172 TDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQE 231
               ++  +L+ +GA      P T   P+H A  +  L  + +L +  A  +        
Sbjct: 58  ----QVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLD-------- 105

Query: 232 PLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKR 286
                                      + D      +  A   G+  I + L   
Sbjct: 106 ---------------------------VCDAWGRLPVDLAEEQGHRDIARYLHAA 133

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 84.4 bits (210), Expect = 2e-19
 Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 15/120 (12%)

Query: 370 NINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQ 429
            I+  G      L  AA    +++ + L++ GA+ N             + +   R  +Q
Sbjct: 4   GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPN-------------ALNRFGRRPIQ 50

Query: 430 YACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
                  + ++ +LLLLHGA+ N        +P+  A + G    +  L   GA++D  +
Sbjct: 51  VMMM--GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCD 108

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 79.8 bits (198), Expect = 5e-18
 Identities = 23/170 (13%), Positives = 45/170 (26%), Gaps = 44/170 (25%)

Query: 448 GADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE-------AARIA 500
              ++          LA A   G  + V++L   GA  +      N+             
Sbjct: 2   SPGIH-MLGGSSDAGLATAAARGQVETVRQLLEAGADPNA----LNRFGRRPIQVMMM-- 54

Query: 501 HSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRG-SALIYVA 559
                                             +  +  GA  N +        +   A
Sbjct: 55  ----------------------------GSAQVAELLLLHGAEPNCADPATLTRPVHDAA 86

Query: 560 WKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGA 609
            +G+ + + +L   GA ++   A G   + +A     + +I R L     
Sbjct: 87  REGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEE-QGHRDIARYLHAATG 135

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 78.6 bits (195), Expect = 2e-17
 Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 2/98 (2%)

Query: 541 GACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNI 600
              +++      + L   A +G  E V  LL+ GAD N  +  G   + +     +   +
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMMGSA--QV 59

Query: 601 VRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
              LL HGA  +  D  T   P+  A      D + +L
Sbjct: 60  AELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVL 97

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 78.3 bits (194), Expect = 2e-17
 Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 4/113 (3%)

Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
              + + V++ +E GA  N  +      +      G  ++ +LLL +GA+ N       T
Sbjct: 21  ARGQVETVRQLLEAGADPNALNRFGRRPIQV-MMMGSAQVAELLLLHGAEPNCADPATLT 79

Query: 587 -ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
             +H A R     + +  L   GA  D+ D   G+ P+  AE   +RDI   L
Sbjct: 80  RPVHDAAR-EGFLDTLVVLHRAGARLDVCD-AWGRLPVDLAEEQGHRDIARYL 130

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 73.6 bits (182), Expect = 9e-16
 Identities = 17/115 (14%), Positives = 37/115 (32%), Gaps = 17/115 (14%)

Query: 370 NINAEGDDMITPLLFAAK-HCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSAL 428
           + NA       P+         +  A+ L+  GA  N  +                   +
Sbjct: 37  DPNALNRFGRRPIQVMMMGSAQV--AELLLLHGAEPNCADPAT------------LTRPV 82

Query: 429 QYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGA 483
             A   +  ++ + +L   GA ++   +   + P+ +A + G   I + L     
Sbjct: 83  HDAA-REGFLDTLVVLHRAGARLD-VCDAWGRLPVDLAEEQGHRDIARYLHAATG 135

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 73.6 bits (182), Expect = 9e-16
 Identities = 30/196 (15%), Positives = 58/196 (29%), Gaps = 64/196 (32%)

Query: 256 DVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVA 315
            + +  G  ++ L  A   G ++ V+ L++   D NA NR+   P+   +        VA
Sbjct: 4   GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMM---MGSAQVA 60

Query: 316 EYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEG 375
           E LL   +                                                N   
Sbjct: 61  ELLLLHGA----------------------------------------------EPNCAD 74

Query: 376 DDMIT-PLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKH 434
              +T P+  AA+   L +   L + GA ++              +    R  +  A + 
Sbjct: 75  PATLTRPVHDAAREGFLDTLVVLHRAGARLD-----------VCDAWG--RLPVDLAEE- 120

Query: 435 KNNIEMVKLLLLHGAD 450
           + + ++ + L     D
Sbjct: 121 QGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 67.5 bits (166), Expect = 1e-13
 Identities = 28/152 (18%), Positives = 50/152 (32%), Gaps = 28/152 (18%)

Query: 425 RSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQ 484
            + L  A   +  +E V+ LL  GAD N   N+  ++P+ V +  G  Q+ + L  +GA+
Sbjct: 13  DAGLATAAA-RGQVETVRQLLEAGADPN-ALNRFGRRPIQVMMM-GSAQVAELLLLHGAE 69

Query: 485 IDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACV 544
            +  +          A                          R    D +      GA +
Sbjct: 70  PNCADPATLTRPVHDA-------------------------AREGFLDTLVVLHRAGARL 104

Query: 545 NVSSERRGSALIYVAWKGYEEIVDLLLDNGAD 576
           +V        +     +G+ +I   L     D
Sbjct: 105 DVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  117 bits (296), Expect = 8e-31
 Identities = 38/164 (23%), Positives = 64/164 (39%), Gaps = 16/164 (9%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
             L SA     + ++  LL     +VN +   GRTAL +    G  ++   L+  GAN +
Sbjct: 7   NELASAAARGDLEQLTSLLQNN-VNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGANPD 64

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTP-ILAVSANMSEDSTDTNE 176
            +D  G+  +H A   G  + ++ LL  +ADV  + +    P  LA              
Sbjct: 65  LKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEG-------HLR 117

Query: 177 IISMLIENGA---NVREKMPFTDFSPLHFAVVKKNLSVVELLIK 217
           ++  L+++ A     R     T       A +     VV L+  
Sbjct: 118 VVEFLVKHTASNVGHRNHKGDT---ACDLARLYGRNEVVSLMQA 158

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  110 bits (279), Expect = 1e-28
 Identities = 39/200 (19%), Positives = 67/200 (33%), Gaps = 48/200 (24%)

Query: 89  DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKAD 148
                L  A  +G  + +T L+ +  NVN ++  G T L +    GN  I + LL + A+
Sbjct: 4   PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGAN 62

Query: 149 VRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTD---FSPLHFAVV 205
              K       I   +           + +  L+E  A+V  +    D     PLH A  
Sbjct: 63  PDLKDRTGFAVIHDAARAGFL------DTLQTLLEFQADVNIE----DNEGNLPLHLAAK 112

Query: 206 KKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLN 265
           + +L VVE L+K  A                                   +V   +   +
Sbjct: 113 EGHLRVVEFLVKHTAS----------------------------------NVGHRNHKGD 138

Query: 266 SLLHKACHVGNLQIVQMLVK 285
           +    A   G  ++V ++  
Sbjct: 139 TACDLARLYGRNEVVSLMQA 158

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 97.5 bits (244), Expect = 8e-24
 Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 11/131 (8%)

Query: 58  TLLCSAVWDNKIRE-VEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANV 116
           T L      N   E    LL  G  + + K + G   ++ A   G    +  L+   A+V
Sbjct: 40  TALQVMKLGNP--EIARRLLLRG-ANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADV 96

Query: 117 NDRDEKGYTPLHLACYLGNKNIVKFLLSKKA-DVRAKCSMMVTPILAVSANMSEDSTDTN 175
           N  D +G  PLHLA   G+  +V+FL+   A +V  +     T                 
Sbjct: 97  NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRN------ 150

Query: 176 EIISMLIENGA 186
           E++S++  NGA
Sbjct: 151 EVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 83.6 bits (208), Expect = 6e-19
 Identities = 40/209 (19%), Positives = 73/209 (34%), Gaps = 57/209 (27%)

Query: 375 GDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKH 434
            +     L  AA   DL+    L+Q   NVN             + +   R+ALQ     
Sbjct: 2   AEPWGNELASAAARGDLEQLTSLLQNNVNVN-------------AQNGFGRTALQVMK-- 46

Query: 435 KNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNK 494
             N E+ + LLL GA+ +   ++     +  A ++G    ++ L  + A ++     ++ 
Sbjct: 47  LGNPEIARRLLLRGANPD-LKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNI----EDN 101

Query: 495 E-------AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGAC-VNV 546
           E       AA+  H         ++ + L                     ++  A  V  
Sbjct: 102 EGNLPLHLAAKEGH--------LRVVEFL---------------------VKHTASNVGH 132

Query: 547 SSERRGSALIYVAWKGYEEIVDLLLDNGA 575
            + +  +A       G  E+V L+  NGA
Sbjct: 133 RNHKGDTACDLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 82.0 bits (204), Expect = 2e-18
 Identities = 36/217 (16%), Positives = 68/217 (31%), Gaps = 65/217 (29%)

Query: 268 LHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVN 327
           L  A   G+L+ +  L++   ++NAQN +    +         +  +A  LL + +    
Sbjct: 9   LASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK---LGNPEIARRLLLRGA---- 61

Query: 328 LPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAK 387
                                                     N + +       +  AA+
Sbjct: 62  ------------------------------------------NPDLKDRTGFAVIHDAAR 79

Query: 388 HCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLH 447
              L + + L++  A+VN               D      L  A K   ++ +V+ L+ H
Sbjct: 80  AGFLDTLQTLLEFQADVN-------------IEDNEGNLPLHLAAKE-GHLRVVEFLVKH 125

Query: 448 GA-DVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGA 483
            A +V    N        +A   G  ++V  +Q  GA
Sbjct: 126 TASNVGHR-NHKGDTACDLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 80.9 bits (201), Expect = 5e-18
 Identities = 31/184 (16%), Positives = 60/184 (32%), Gaps = 42/184 (22%)

Query: 462 PLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE------AARIAHSTTELEERKKINDL 515
            LA A   GD + +  L      ++     +N          ++ +         +I   
Sbjct: 8   ELASAAARGDLEQLTSLLQNNVNVNA----QNGFGRTALQVMKLGN--------PEIARR 55

Query: 516 LKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGA 575
           L                     +  GA  ++      + +   A  G+ + +  LL+  A
Sbjct: 56  L---------------------LLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQA 94

Query: 576 DVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYY-DMKDGKTGKTPLKHAEAGKNRDI 634
           DVN +   G   LH+A +      +V  L+ H A     ++   G T    A      ++
Sbjct: 95  DVNIEDNEGNLPLHLAAKEGHLR-VVEFLVKHTASNVGHRN-HKGDTACDLARLYGRNEV 152

Query: 635 IDLL 638
           + L+
Sbjct: 153 VSLM 156

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 74.7 bits (185), Expect = 6e-16
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 3/91 (3%)

Query: 548 SERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHH 607
           +E  G+ L   A +G  E +  LL N  +VN ++  G TAL +    +    I R+LL  
Sbjct: 2   AEPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNP--EIARRLLLR 59

Query: 608 GAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
           GA  D+KD +TG   +  A      D +  L
Sbjct: 60  GANPDLKD-RTGFAVIHDAARAGFLDTLQTL 89

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  115 bits (292), Expect = 2e-30
 Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 9/160 (5%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
             L  A     ++EV  LL       +   + G+TAL + +  G   +   L+  GA+ N
Sbjct: 4   DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASPN 62

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEI 177
            +D  G +P+H A   G  + +K L+   ADV         PI                +
Sbjct: 63  VQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHT------AV 116

Query: 178 ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIK 217
           +S L    +++  +      +PL  A+ +    +V++L  
Sbjct: 117 VSFLAA-ESDLHRRDAR-GLTPLELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  107 bits (269), Expect = 3e-27
 Identities = 33/166 (19%), Positives = 65/166 (39%), Gaps = 17/166 (10%)

Query: 90  GRTALYMAILQGLYKMVT-LLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKAD 148
               L  A  +G  + V  LL     + +  +  G T L +  + G+  I   LL + A 
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF-GSTAIALELLKQGAS 60

Query: 149 VRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTD---FSPLHFAVV 205
              + +   +P+   +           + + +L+E+GA+V       D     P+H AV 
Sbjct: 61  PNVQDTSGTSPVHDAARTGFL------DTLKVLVEHGADVNVP----DGTGALPIHLAVQ 110

Query: 206 KKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLN 251
           + + +VV  L   ++D +        P L  A++  +  +V+    
Sbjct: 111 EGHTAVVSFLAA-ESDLHRRDARGLTP-LELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 84.4 bits (210), Expect = 2e-19
 Identities = 38/204 (18%), Positives = 66/204 (32%), Gaps = 53/204 (25%)

Query: 122 KGYTPLHLACYLGNKNIVKFLLSKK-ADVRAKCSMMVTPILAVSANMSEDSTDTNEIISM 180
           +    L  A   G+   V+ LL ++     A      T  L V    S        I   
Sbjct: 1   RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTA-LQVMMFGST------AIALE 53

Query: 181 LIENGANVREKMPFTD---FSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFA 237
           L++ GA+   +    D    SP+H A     L  +++L++  AD N              
Sbjct: 54  LLKQGASPNVQ----DTSGTSPVHDAARTGFLDTLKVLVEHGADVN-------------- 95

Query: 238 IESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYF 297
                                + DG     +H A   G+  +V  L   + D++ ++   
Sbjct: 96  ---------------------VPDGTGALPIHLAVQEGHTAVVSFLAA-ESDLHRRDARG 133

Query: 298 LPPMFFAIGMGRKHTHVAEYLLQQ 321
           L P+  A+  G     + + L   
Sbjct: 134 LTPLELALQRG--AQDLVDILQGH 155

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 81.7 bits (203), Expect = 2e-18
 Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 3/101 (2%)

Query: 538 IEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSN 597
           ++ GA  NV      S +   A  G+ + + +L+++GADVN    TG   +H+A +    
Sbjct: 55  LKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHT 114

Query: 598 DNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
             +V   L   +    +D   G TPL+ A     +D++D+L
Sbjct: 115 A-VV-SFLAAESDLHRRD-ARGLTPLELALQRGAQDLVDIL 152

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 75.5 bits (187), Expect = 3e-16
 Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 4/113 (3%)

Query: 527 RSNKYDEVKKNIE-DGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGF 585
                 EV++ +  +    +  +    +AL  V   G   I   LL  GA  N +  +G 
Sbjct: 11  ARGDVQEVRRLLHRELVHPDALNRFGKTAL-QVMMFGSTAIALELLKQGASPNVQDTSGT 69

Query: 586 TALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
           + +H A R    D  ++ L+ HGA  ++ D  TG  P+  A    +  ++  L
Sbjct: 70  SPVHDAARTGFLD-TLKVLVEHGADVNVPD-GTGALPIHLAVQEGHTAVVSFL 120

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 72.1 bits (178), Expect = 6e-15
 Identities = 30/202 (14%), Positives = 62/202 (30%), Gaps = 60/202 (29%)

Query: 380 TPLLFAAKHCDLQSAKYLI-QKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNI 438
             L  AA   D+Q  + L+ ++  + +             + +   ++ALQ       + 
Sbjct: 4   DRLSGAAARGDVQEVRRLLHRELVHPD-------------ALNRFGKTALQVMMF--GST 48

Query: 439 EMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE--- 495
            +   LL  GA  N         P+  A ++G    +K L  +GA ++      +     
Sbjct: 49  AIALELLKQGASPNVQDTS-GTSPVHDAARTGFLDTLKVLVEHGADVNV----PDGTGAL 103

Query: 496 ----AARIAHS-TTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSER 550
               A +  H+             L                          + ++    R
Sbjct: 104 PIHLAVQEGHTAVVSF--------LAA-----------------------ESDLHRRDAR 132

Query: 551 RGSALIYVAWKGYEEIVDLLLD 572
             + L     +G +++VD+L  
Sbjct: 133 GLTPLELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 70.9 bits (175), Expect = 1e-14
 Identities = 38/214 (17%), Positives = 73/214 (34%), Gaps = 66/214 (30%)

Query: 268 LHKACHVGNLQIVQMLVKRKF-DINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINV 326
           L  A   G++Q V+ L+ R+    +A NR+    +   +      T +A  LL+Q +   
Sbjct: 6   LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM---FGSTAIALELLKQGA--- 59

Query: 327 NLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAA 386
                                                      + N +     +P+  AA
Sbjct: 60  -------------------------------------------SPNVQDTSGTSPVHDAA 76

Query: 387 KHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLL 446
           +   L + K L++ GA+VN+ +                   +  A + + +  +V   L 
Sbjct: 77  RTGFLDTLKVLVEHGADVNVPDGTG-------------ALPIHLAVQ-EGHTAVVS-FLA 121

Query: 447 HGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQN 480
             +D++   +     PL +A+Q G   +V  LQ 
Sbjct: 122 AESDLHRR-DARGLTPLELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 68.2 bits (168), Expect = 1e-13
 Identities = 25/121 (20%), Positives = 47/121 (38%), Gaps = 19/121 (15%)

Query: 370 NINAEGDDMITPLLFAAK-HCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSAL 428
           + +A      T L         +  A  L+++GA+ N               D    S +
Sbjct: 28  HPDALNRFGKTALQVMMFGSTAI--ALELLKQGASPN-------------VQDTSGTSPV 72

Query: 429 QYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKE 488
             A +    ++ +K+L+ HGADVN         P+ +A+Q G   +V  L    + + + 
Sbjct: 73  HDAAR-TGFLDTLKVLVEHGADVNVPDGT-GALPIHLAVQEGHTAVVSFLAA-ESDLHRR 129

Query: 489 N 489
           +
Sbjct: 130 D 130

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 67.4 bits (166), Expect = 2e-13
 Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 4/90 (4%)

Query: 550 RRGSALIYVAWKGYEEIVDLLLD-NGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHG 608
           R G  L   A +G  + V  LL       +  +  G TAL +     +   I  +LL  G
Sbjct: 1   RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGST--AIALELLKQG 58

Query: 609 AYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
           A  +++D  +G +P+  A      D + +L
Sbjct: 59  ASPNVQD-TSGTSPVHDAARTGFLDTLKVL 87

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 63.6 bits (156), Expect = 5e-12
 Identities = 26/214 (12%), Positives = 55/214 (25%), Gaps = 64/214 (29%)

Query: 234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQ 293
           L  A     V+ V   L+ +       +    + L      G+  I   L+K+    N Q
Sbjct: 6   LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF-GSTAIALELLKQGASPNVQ 64

Query: 294 NRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQ 353
           +     P+  A   G       + L++  +                              
Sbjct: 65  DTSGTSPVHDAARTG--FLDTLKVLVEHGA------------------------------ 92

Query: 354 IKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAF 413
                           ++N        P+  A +        +L    ++++        
Sbjct: 93  ----------------DVNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLH-------- 127

Query: 414 ISDARSSDFCFRSALQYACKHKNNIEMVKLLLLH 447
                  D    + L+ A +     ++V +L  H
Sbjct: 128 -----RRDARGLTPLELALQR-GAQDLVDILQGH 155

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 42.4 bits (101), Expect = 9e-05
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHH 112
             +  AV +     V FL +  D  ++ +   G T L +A+ +G   +V +L  H
Sbjct: 103 LPIHLAVQEGHTAVVSFLAAESD--LHRRDARGLTPLELALQRGAQDLVDILQGH 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  115 bits (291), Expect = 3e-30
 Identities = 25/146 (17%), Positives = 47/146 (32%), Gaps = 11/146 (7%)

Query: 80  DHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIV 139
           +      ++     L  A  +G  + V  L+  GAN N  +  G  P+ +    G+  + 
Sbjct: 2   EPAAGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMM-GSARVA 60

Query: 140 KFLLSKKADVRAKCSMMVTP--ILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDF 197
           + LL   A+        +T     A             + + +L   GA +  +  +   
Sbjct: 61  ELLLLHGAEPNCADPATLTRPVHDAAREGFL-------DTLVVLHRAGARLDVRDAW-GR 112

Query: 198 SPLHFAVVKKNLSVVELLIKCKADTN 223
            P+  A    +  V   L      T 
Sbjct: 113 LPVDLAEELGHRDVARYLRAAAGGTR 138

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  110 bits (277), Expect = 2e-28
 Identities = 30/158 (18%), Positives = 52/158 (32%), Gaps = 17/158 (10%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
             L +A    ++ EV  LL  G  + N     GR  + + +  G  ++  LL+ HGA  N
Sbjct: 14  DWLATAAARGRVEEVRALLEAG-ANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPN 71

Query: 118 DRDEKGYT-PLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTP-ILAVSANMSEDSTDTN 175
             D    T P+H A   G  + +  L    A +  + +    P  LA             
Sbjct: 72  CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHR------- 124

Query: 176 EIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVE 213
           ++   L       R        +       +    + +
Sbjct: 125 DVARYLRAAAGGTRGS------NHARIDAAEGPSDIPD 156

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 81.4 bits (202), Expect = 3e-18
 Identities = 30/198 (15%), Positives = 53/198 (26%), Gaps = 52/198 (26%)

Query: 447 HGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE-------AARI 499
             A  +    +P    LA A   G  + V+ L   GA  +      N             
Sbjct: 3   PAAGSSM---EPSADWLATAAARGRVEEVRALLEAGANPNA----PNSYGRRPIQVMMM- 54

Query: 500 AHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRG-SALIYV 558
                                              +  +  GA  N +        +   
Sbjct: 55  -----------------------------GSARVAELLLLHGAEPNCADPATLTRPVHDA 85

Query: 559 AWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKT 618
           A +G+ + + +L   GA ++ + A G   + +A     + ++ R L           G  
Sbjct: 86  AREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEE-LGHRDVARYLRAAAG------GTR 138

Query: 619 GKTPLKHAEAGKNRDIID 636
           G    +   A    DI D
Sbjct: 139 GSNHARIDAAEGPSDIPD 156

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 80.6 bits (200), Expect = 6e-18
 Identities = 27/119 (22%), Positives = 47/119 (39%), Gaps = 15/119 (12%)

Query: 371 INAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQY 430
             +  +     L  AA    ++  + L++ GAN N           A +S    R  +Q 
Sbjct: 5   AGSSMEPSADWLATAAARGRVEEVRALLEAGANPN-----------APNSYG--RRPIQV 51

Query: 431 ACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
                 +  + +LLLLHGA+ N        +P+  A + G    +  L   GA++D  +
Sbjct: 52  MMM--GSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRD 108

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 79.1 bits (196), Expect = 2e-17
 Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 4/113 (3%)

Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
              + +EV+  +E GA  N  +      +  V   G   + +LLL +GA+ N       T
Sbjct: 21  ARGRVEEVRALLEAGANPNAPNSYGRRPI-QVMMMGSARVAELLLLHGAEPNCADPATLT 79

Query: 587 -ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
             +H A R     + +  L   GA  D++D   G+ P+  AE   +RD+   L
Sbjct: 80  RPVHDAAR-EGFLDTLVVLHRAGARLDVRD-AWGRLPVDLAEELGHRDVARYL 130

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 77.9 bits (193), Expect = 4e-17
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 72/221 (32%)

Query: 256 DVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVA 315
             S+        L  A   G ++ V+ L++   + NA N Y   P+   + MG     VA
Sbjct: 6   GSSMEPSA--DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MG--SARVA 60

Query: 316 EYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEG 375
           E LL   +                                                N   
Sbjct: 61  ELLLLHGA----------------------------------------------EPNCAD 74

Query: 376 DDMIT-PLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKH 434
              +T P+  AA+   L +   L + GA ++            R +    R  +  A + 
Sbjct: 75  PATLTRPVHDAAREGFLDTLVVLHRAGARLD-----------VRDAWG--RLPVDLAEE- 120

Query: 435 KNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIV 475
             + ++ + L                    +    G   I 
Sbjct: 121 LGHRDVARYLRAAAGGTR------GSNHARIDAAEGPSDIP 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 77.5 bits (192), Expect = 5e-17
 Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 6/103 (5%)

Query: 538 IEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSN 597
           +E  A    S E     L   A +G  E V  LL+ GA+ N  ++ G   + +     + 
Sbjct: 1   MEPAA--GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSA- 57

Query: 598 DNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNR-DIIDLLH 639
             +   LL HGA  +  D  T   P+ H  A +   D + +LH
Sbjct: 58  -RVAELLLLHGAEPNCADPATLTRPV-HDAAREGFLDTLVVLH 98

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 77.5 bits (192), Expect = 6e-17
 Identities = 30/211 (14%), Positives = 53/211 (25%), Gaps = 81/211 (38%)

Query: 112 HGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDS 171
             A  +         L  A   G    V+ LL   A+  A                    
Sbjct: 3   PAAGSSMEP--SADWLATAAARGRVEEVRALLEAGANPNAP------------------- 41

Query: 172 TDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQE 231
            ++                        P+   +   +  V ELL+   A+ N        
Sbjct: 42  -NSY--------------------GRRPIQVMM-MGSARVAELLLLHGAEPN-------- 71

Query: 232 PLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSL-LHKACHVGNLQIVQMLVKRKFDI 290
                                       +D    +  +H A   G L  + +L +    +
Sbjct: 72  ---------------------------CADPATLTRPVHDAAREGFLDTLVVLHRAGARL 104

Query: 291 NAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQ 321
           + ++ +   P+  A  +G  H  VA YL   
Sbjct: 105 DVRDAWGRLPVDLAEELG--HRDVARYLRAA 133

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 76.4 bits (189), Expect = 2e-16
 Identities = 25/163 (15%), Positives = 48/163 (29%), Gaps = 28/163 (17%)

Query: 427 ALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQID 486
            L  A   +  +E V+ LL  GA+ N   N   ++P+ V +  G  ++ + L  +GA+ +
Sbjct: 15  WLATAA-ARGRVEEVRALLEAGANPN-APNSYGRRPIQVMMM-GSARVAELLLLHGAEPN 71

Query: 487 KENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNV 546
             +          A                          R    D +      GA ++V
Sbjct: 72  CADPATLTRPVHDA-------------------------AREGFLDTLVVLHRAGARLDV 106

Query: 547 SSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALH 589
                   +      G+ ++   L          +     A  
Sbjct: 107 RDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE 149

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 75.2 bits (186), Expect = 5e-16
 Identities = 19/133 (14%), Positives = 41/133 (30%), Gaps = 19/133 (14%)

Query: 370 NINAEGDDMITPLLFAAK-HCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSAL 428
           N NA       P+         +  A+ L+  GA  N             +        +
Sbjct: 37  NPNAPNSYGRRPIQVMMMGSARV--AELLLLHGAEPN------------CADPATLTRPV 82

Query: 429 QYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKE 488
             A +    ++ + +L   GA ++   +   + P+ +A + G   + + L+         
Sbjct: 83  HDAARE-GFLDTLVVLHRAGARLD-VRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGS 140

Query: 489 NYLKNKEAARIAH 501
           N    +  A    
Sbjct: 141 N--HARIDAAEGP 151

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  114 bits (288), Expect = 4e-30
 Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 12/138 (8%)

Query: 82  DVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKF 141
           D       G T L++A ++G    V  L+ +G++ N +D  G+TPLH AC  G+  +V+ 
Sbjct: 3   DPF-TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVEL 61

Query: 142 LLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDF--SP 199
           LL  KA V        +P+   + N         +I+ +L+  GA+         F   P
Sbjct: 62  LLQHKALVNTTGYQNDSPLHDAAKNGHV------DIVKLLLSYGASRNAV---NIFGLRP 112

Query: 200 LHFAVVKKNLSVVELLIK 217
           + +   +   S++ L  K
Sbjct: 113 VDYTDDESMKSLLLLPEK 130

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  107 bits (270), Expect = 1e-27
 Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 9/131 (6%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           TLL  A     I  VE+LL  G  D N K   G T L+ A   G  K+V LL+ H A VN
Sbjct: 12  TLLHIASIKGDIPSVEYLLQNG-SDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVN 70

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTP-ILAVSANMSEDSTDTNE 176
               +  +PLH A   G+ +IVK LLS  A   A     + P       +M         
Sbjct: 71  TTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESM-------KS 123

Query: 177 IISMLIENGAN 187
           ++ +  +N ++
Sbjct: 124 LLLLPEKNESS 134

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 85.9 bits (214), Expect = 4e-20
 Identities = 25/112 (22%), Positives = 51/112 (45%), Gaps = 2/112 (1%)

Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
                  V+  +++G+  NV      + L      G+ ++V+LLL + A VN       +
Sbjct: 19  IKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDS 78

Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
            LH A + + + +IV+ LL +GA  +  +   G  P+ + +    + ++ L 
Sbjct: 79  PLHDAAK-NGHVDIVKLLLSYGASRNAVN-IFGLRPVDYTDDESMKSLLLLP 128

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 84.4 bits (210), Expect = 1e-19
 Identities = 41/213 (19%), Positives = 69/213 (32%), Gaps = 78/213 (36%)

Query: 113 GANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDST 172
           G +    + +G T LH+A   G+   V++LL   +D                        
Sbjct: 1   GIDPF-TNHRGETLLHIASIKGDIPSVEYLLQNGSDP----------------------- 36

Query: 173 DTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEP 232
                         NV++   +T   PLH A    +L VVELL++ KA  N         
Sbjct: 37  --------------NVKDHAGWT---PLHEACNHGHLKVVELLLQHKALVN--------- 70

Query: 233 LLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINA 292
                                      +    +S LH A   G++ IV++L+      NA
Sbjct: 71  --------------------------TTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA 104

Query: 293 QNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSIN 325
            N + L P+ +          +     + +S +
Sbjct: 105 VNIFGLRPVDYTDDES--MKSLLLLPEKNESSS 135

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 77.5 bits (192), Expect = 4e-17
 Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 16/120 (13%)

Query: 370 NINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQ 429
           +         T L  A+   D+ S +YL+Q G++ N               D    + L 
Sbjct: 3   DPFTNHRGE-TLLHIASIKGDIPSVEYLLQNGSDPN-------------VKDHAGWTPLH 48

Query: 430 YACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
            AC H  ++++V+LLL H A VN T  +    PL  A ++G   IVK L +YGA  +  N
Sbjct: 49  EACNH-GHLKVVELLLQHKALVNTTGYQ-NDSPLHDAAKNGHVDIVKLLLSYGASRNAVN 106

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 75.9 bits (188), Expect = 2e-16
 Identities = 34/169 (20%), Positives = 56/169 (33%), Gaps = 43/169 (25%)

Query: 448 GADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNK-------EAARIA 500
           G D    +N   +  L +A   GD   V+ L   G+  +     K+        EA    
Sbjct: 1   GIDPF--TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNV----KDHAGWTPLHEACNHG 54

Query: 501 HSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAW 560
           H         K+ +LL                     ++  A VN +  +  S L   A 
Sbjct: 55  H--------LKVVELL---------------------LQHKALVNTTGYQNDSPLHDAAK 85

Query: 561 KGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGA 609
            G+ +IV LLL  GA  N  +  G   +       S  +++     + +
Sbjct: 86  NGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDD-ESMKSLLLLPEKNES 133

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 74.4 bits (184), Expect = 5e-16
 Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 15/114 (13%)

Query: 370 NINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQ 429
           + N +     TPL  A  H  L+  + L+Q  A VN             ++ +   S L 
Sbjct: 35  DPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVN-------------TTGYQNDSPLH 81

Query: 430 YACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGA 483
            A K   ++++VKLLL +GA  N   N    +P+          ++   +   +
Sbjct: 82  DAAK-NGHVDIVKLLLSYGASRN-AVNIFGLRPVDYTDDESMKSLLLLPEKNES 133

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 73.2 bits (181), Expect = 1e-15
 Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 5/97 (5%)

Query: 544 VNVSSERRGS-ALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVR 602
           ++  +  RG   L   + KG    V+ LL NG+D N K   G+T LH AC  H +  +V 
Sbjct: 2   IDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACN-HGHLKVVE 60

Query: 603 KLLHHGAYYDMKDGKTGKTPLKHAEAGKNR-DIIDLL 638
            LL H A  +        +PL H  A     DI+ LL
Sbjct: 61  LLLQHKALVNTTG-YQNDSPL-HDAAKNGHVDIVKLL 95

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 65.1 bits (160), Expect = 7e-13
 Identities = 31/183 (16%), Positives = 53/183 (28%), Gaps = 62/183 (33%)

Query: 268 LHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVN 327
           LH A   G++  V+ L++   D N ++     P+  A   G  H  V E LLQ  +    
Sbjct: 14  LHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHG--HLKVVELLLQHKA---- 67

Query: 328 LPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAK 387
                                                      +N  G    +PL  AAK
Sbjct: 68  ------------------------------------------LVNTTGYQNDSPLHDAAK 85

Query: 388 HCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLH 447
           +  +   K L+  GA+ N                      + Y    ++   ++ L   +
Sbjct: 86  NGHVDIVKLLLSYGASRNAVNIFG-------------LRPVDYTD-DESMKSLLLLPEKN 131

Query: 448 GAD 450
            + 
Sbjct: 132 ESS 134

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 60.1 bits (147), Expect = 4e-11
 Identities = 30/155 (19%), Positives = 53/155 (34%), Gaps = 34/155 (21%)

Query: 425 RSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQ 484
            + L  A   K +I  V+ LL +G+D N   +     PL  A   G  ++V+ L  + A 
Sbjct: 11  ETLLHIASI-KGDIPSVEYLLQNGSDPN-VKDHAGWTPLHEACNHGHLKVVELLLQHKAL 68

Query: 485 IDKENYLKNK---EAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDG 541
           ++   Y  +    +AA+  H          I  LL                     +  G
Sbjct: 69  VNTTGYQNDSPLHDAAKNGH--------VDIVKLL---------------------LSYG 99

Query: 542 ACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGAD 576
           A  N  +      + Y   +  + ++ L   N + 
Sbjct: 100 ASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 53.6 bits (130), Expect = 8e-09
 Identities = 29/205 (14%), Positives = 57/205 (27%), Gaps = 83/205 (40%)

Query: 199 PLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVS 258
            LH A +K ++  VE L++  +D                             N K+    
Sbjct: 13  LLHIASIKGDIPSVEYLLQNGSD----------------------------PNVKDHAGW 44

Query: 259 ISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYL 318
                    LH+AC+ G+L++V++L++ K  +N        P+  A   G  H  + + L
Sbjct: 45  TP-------LHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNG--HVDIVKLL 95

Query: 319 LQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDM 378
           L   +                                              + NA     
Sbjct: 96  LSYGA----------------------------------------------SRNAVNIFG 109

Query: 379 ITPLLFAAKHCDLQSAKYLIQKGAN 403
           + P+ +              +  ++
Sbjct: 110 LRPVDYTDDESMKSLLLLPEKNESS 134

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  116 bits (292), Expect = 5e-30
 Identities = 31/190 (16%), Positives = 60/190 (31%), Gaps = 21/190 (11%)

Query: 45  GIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYK 104
             I  S               D               DV  +     T  + A  +   +
Sbjct: 3   NKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAA-DVVSE---YETPWWTAARKADEQ 58

Query: 105 MVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMM-VTPILAV 163
            ++ L+    +V+  DE G T L     LG+   V+ L    AD+  +     +T +   
Sbjct: 59  ALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMA 117

Query: 164 SANMSEDSTDTNEIISMLIENGANVREKMPFTD---FSPLHFAVVKKNLSVVELLIKCKA 220
           +  +        E++  L+E GA++  +    D    + L  A      +     ++   
Sbjct: 118 AGYVRP------EVVEALVELGADIEVE----DERGLTALELAREILKTTPKGNPMQFGR 167

Query: 221 DTNL--IVKV 228
              L  ++ V
Sbjct: 168 RIGLEKVINV 177

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 99.9 bits (250), Expect = 2e-24
 Identities = 35/246 (14%), Positives = 64/246 (26%), Gaps = 78/246 (31%)

Query: 370 NINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQ 429
             +    +     L   K     S        A+V              S      +   
Sbjct: 6   IGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVV-------------SEY---ETPWW 49

Query: 430 YACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
            A + K + + +  LL    DV+   ++  +  L      G  + V+ L   GA +D   
Sbjct: 50  TAAR-KADEQALSQLL-EDRDVD-AVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH-- 104

Query: 490 YLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSE 549
                                                         +++  G        
Sbjct: 105 ----------------------------------------------RDMRGGL------- 111

Query: 550 RRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGA 609
              +AL   A     E+V+ L++ GAD+  +   G TAL +A             +  G 
Sbjct: 112 ---TALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELARE-ILKTTPKGNPMQFGR 167

Query: 610 YYDMKD 615
              ++ 
Sbjct: 168 RIGLEK 173

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 82.9 bits (206), Expect = 1e-18
 Identities = 37/238 (15%), Positives = 63/238 (26%), Gaps = 80/238 (33%)

Query: 83  VNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFL 142
            +    +G     +    G         +  A+V     +  TP   A    ++  +  L
Sbjct: 7   GSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVS---EYETPWWTAARKADEQALSQL 63

Query: 143 LSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHF 202
           L +  DV A                     D         ENG            + L F
Sbjct: 64  L-EDRDVDAV--------------------D---------ENG-----------RTALLF 82

Query: 203 AVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDG 262
                +   V LL +  AD                            L+ ++       G
Sbjct: 83  VAGLGSDKCVRLLAEAGAD----------------------------LDHRDMR----GG 110

Query: 263 DLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQ 320
              + LH A      ++V+ LV+   DI  ++   L  +  A  +    T      +Q
Sbjct: 111 --LTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREIL--KTTPKGNPMQ 164

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 81.4 bits (202), Expect = 5e-18
 Identities = 34/178 (19%), Positives = 61/178 (34%), Gaps = 33/178 (18%)

Query: 462 PLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLD 521
              +  + G            A +      + +     A                     
Sbjct: 17  EYLIEWKDGHSPSWVPSSYIAADVVS----EYETPWWTA--------------------- 51

Query: 522 FLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFK- 580
                R      + + +E    V+   E   +AL++VA  G ++ V LL + GAD++ + 
Sbjct: 52  ----ARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRD 106

Query: 581 SATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
              G TALHMA  +   + +V  L+  GA  +++D + G T L+ A            
Sbjct: 107 MRGGLTALHMAAGYVRPE-VVEALVELGADIEVED-ERGLTALELAREILKTTPKGNP 162

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 73.3 bits (181), Expect = 3e-15
 Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 18/130 (13%)

Query: 360 IIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARS 419
                     ++ +E +   TP   AA+  D Q+   L+ +  +V+           A  
Sbjct: 29  SWVPSSYIAADVVSEYE---TPWWTAARKADEQALSQLL-EDRDVD-----------AVD 73

Query: 420 SDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQ 479
            +   R+AL +      + + V+LL   GAD++    +     L +A      ++V+ L 
Sbjct: 74  ENG--RTALLFVAGL-GSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALV 130

Query: 480 NYGAQIDKEN 489
             GA I+ E+
Sbjct: 131 ELGADIEVED 140

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 71.8 bits (177), Expect = 1e-14
 Identities = 31/300 (10%), Positives = 68/300 (22%), Gaps = 128/300 (42%)

Query: 113 GANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDST 172
               +    +G     +    G+           ADV ++                   T
Sbjct: 4   KIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSE-----------------YET 46

Query: 173 DTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEP 232
                                     P   A  K +   +  L++   D           
Sbjct: 47  --------------------------PWWTAARKADEQALSQLLE-DRD----------- 68

Query: 233 LLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINA 292
                            +++ +      +G   + L     +G+ + V++L +   D++ 
Sbjct: 69  -----------------VDAVD-----ENG--RTALLFVAGLGSDKCVRLLAEAGADLDH 104

Query: 293 QNRYF-LPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQ 351
           ++    L  +  A G       V E L++  +                            
Sbjct: 105 RDMRGGLTALHMAAGYV--RPEVVEALVELGA---------------------------- 134

Query: 352 TQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQK 411
                             +I  E +  +T L  A +          +Q G  + L +   
Sbjct: 135 ------------------DIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVIN 176

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 67.5 bits (166), Expect = 3e-13
 Identities = 23/219 (10%), Positives = 59/219 (26%), Gaps = 66/219 (30%)

Query: 234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQ 293
                +           +    DV     +  +    A    + Q +  L++ + D++A 
Sbjct: 18  YLIEWKDGHSPSWVP-SSYIAADV---VSEYETPWWTAARKADEQALSQLLEDR-DVDAV 72

Query: 294 NRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQ 353
           +      + F  G+G         L +    +++                +D +      
Sbjct: 73  DENGRTALLFVAGLG--SDKCVRLLAEAG-ADLDH---------------RDMR------ 108

Query: 354 IKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAF 413
                                    +T L  AA +   +  + L++ GA++ + + +   
Sbjct: 109 -----------------------GGLTALHMAAGYVRPEVVEALVELGADIEVEDERG-- 143

Query: 414 ISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVN 452
                       +AL+ A +           +  G  + 
Sbjct: 144 -----------LTALELARE-ILKTTPKGNPMQFGRRIG 170

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 63.3 bits (155), Expect = 9e-12
 Identities = 20/106 (18%), Positives = 32/106 (30%), Gaps = 11/106 (10%)

Query: 533 EVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMAC 592
           EV K I      + ++       +     G+           ADV    +   T    A 
Sbjct: 1   EVNKII-----GSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVV---SEYETPWWTAA 52

Query: 593 RFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
           R       + +LL      D  D + G+T L       +   + LL
Sbjct: 53  RKADEQ-ALSQLL-EDRDVDAVD-ENGRTALLFVAGLGSDKCVRLL 95

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  110 bits (278), Expect = 7e-29
 Identities = 52/135 (38%), Positives = 75/135 (55%), Gaps = 13/135 (9%)

Query: 89  DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKAD 148
           +GRT L++A   G  ++V LL+  GA+VN +D+ G TPLHLA   G+  +VK LL   AD
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 149 VRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTD---FSPLHFAVV 205
           V AK     TP+   + N         E++ +L+E GA+V  K    D    +PLH A  
Sbjct: 61  VNAKDKNGRTPLHLAARNGHL------EVVKLLLEAGADVNAK----DKNGRTPLHLAAR 110

Query: 206 KKNLSVVELLIKCKA 220
             +L VV+LL++  A
Sbjct: 111 NGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  104 bits (263), Expect = 9e-27
 Identities = 50/129 (38%), Positives = 71/129 (55%), Gaps = 7/129 (5%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           T L  A  +  +  V+ LL  G  DVN K ++GRT L++A   G  ++V LL+  GA+VN
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGA-DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN 62

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEI 177
            +D+ G TPLHLA   G+  +VK LL   ADV AK     TP+   + N         E+
Sbjct: 63  AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL------EV 116

Query: 178 ISMLIENGA 186
           + +L+E GA
Sbjct: 117 VKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 82.4 bits (205), Expect = 6e-19
 Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 2/112 (1%)

Query: 527 RSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFT 586
           R+   + VK  +E GA VN   +   + L   A  G+ E+V LLL+ GADVN K   G T
Sbjct: 11  RNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRT 70

Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
            LH+A R    + +V+ LL  GA  + KD K G+TPL  A    + +++ LL
Sbjct: 71  PLHLAARNGHLE-VVKLLLEAGADVNAKD-KNGRTPLHLAARNGHLEVVKLL 120

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 73.5 bits (182), Expect = 7e-16
 Identities = 50/199 (25%), Positives = 74/199 (37%), Gaps = 77/199 (38%)

Query: 123 GYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLI 182
           G TPLHLA   G+  +VK LL   ADV AK                    D         
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAK--------------------D--------- 32

Query: 183 ENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNS 242
           +NG            +PLH A    +L VV+LL++  AD N                   
Sbjct: 33  KNG-----------RTPLHLAARNGHLEVVKLLLEAGADVN------------------- 62

Query: 243 VKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMF 302
                             D +  + LH A   G+L++V++L++   D+NA+++    P+ 
Sbjct: 63  ----------------AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLH 106

Query: 303 FAIGMGRKHTHVAEYLLQQ 321
            A   G  H  V + LL+ 
Sbjct: 107 LAARNG--HLEVVKLLLEA 123

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 72.4 bits (179), Expect = 2e-15
 Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 15/114 (13%)

Query: 370 NINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQ 429
           ++NA+  +  TPL  AA++  L+  K L++ GA+VN           A+  +   R+ L 
Sbjct: 27  DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-----------AKDKN--GRTPLH 73

Query: 430 YACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGA 483
            A     ++E+VKLLL  GADVN   +K  + PL +A ++G  ++VK L   GA
Sbjct: 74  LAA-RNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 71.6 bits (177), Expect = 3e-15
 Identities = 48/156 (30%), Positives = 68/156 (43%), Gaps = 41/156 (26%)

Query: 462 PLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE-------AARIAHSTTELEERKKIND 514
           PL +A ++G  ++VK L   GA ++     K+K        AAR  H         ++  
Sbjct: 5   PLHLAARNGHLEVVKLLLEAGADVNA----KDKNGRTPLHLAARNGH--------LEVVK 52

Query: 515 LLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNG 574
           LL                     +E GA VN   +   + L   A  G+ E+V LLL+ G
Sbjct: 53  LL---------------------LEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 91

Query: 575 ADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAY 610
           ADVN K   G T LH+A R    + +V+ LL  GAY
Sbjct: 92  ADVNAKDKNGRTPLHLAARNGHLE-VVKLLLEAGAY 126

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 71.6 bits (177), Expect = 4e-15
 Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 2/85 (2%)

Query: 554 ALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDM 613
            L   A  G+ E+V LLL+ GADVN K   G T LH+A R    + +V+ LL  GA  + 
Sbjct: 5   PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLE-VVKLLLEAGADVNA 63

Query: 614 KDGKTGKTPLKHAEAGKNRDIIDLL 638
           KD K G+TPL  A    + +++ LL
Sbjct: 64  KD-KNGRTPLHLAARNGHLEVVKLL 87

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 68.9 bits (170), Expect = 3e-14
 Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 15/110 (13%)

Query: 380 TPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIE 439
           TPL  AA++  L+  K L++ GA+VN           A+  +   R+ L  A     ++E
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVN-----------AKDKN--GRTPLHLAA-RNGHLE 49

Query: 440 MVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
           +VKLLL  GADVN   +K  + PL +A ++G  ++VK L   GA ++ ++
Sbjct: 50  VVKLLLEAGADVN-AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD 98

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 63.5 bits (156), Expect = 2e-12
 Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 42/158 (26%)

Query: 425 RSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQ 484
           R+ L  A     ++E+VKLLL  GADVN       + PL +A ++G  ++VK L   GA 
Sbjct: 3   RTPLHLAA-RNGHLEVVKLLLEAGADVNAKDKN-GRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 485 IDKENYLKNKE-------AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKN 537
           ++     K+K        AAR  H         ++  LL                     
Sbjct: 61  VNA----KDKNGRTPLHLAARNGH--------LEVVKLL--------------------- 87

Query: 538 IEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGA 575
           +E GA VN   +   + L   A  G+ E+V LLL+ GA
Sbjct: 88  LEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 41.6 bits (99), Expect = 9e-05
 Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)

Query: 584 GFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
           G T LH+A R + +  +V+ LL  GA  + KD K G+TPL  A    + +++ LL
Sbjct: 2   GRTPLHLAAR-NGHLEVVKLLLEAGADVNAKD-KNGRTPLHLAARNGHLEVVKLL 54

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  113 bits (284), Expect = 1e-28
 Identities = 31/199 (15%), Positives = 66/199 (33%), Gaps = 41/199 (20%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDH---------------------------DVNEKLQDG 90
             +  A++  + R  + L                                  V E+ +  
Sbjct: 14  VKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQAESI 73

Query: 91  RTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKK-ADV 149
              L+ A  +G    +   + +   VN  D+ G T L+ AC+ G+K+IV+ L ++   ++
Sbjct: 74  DNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL 133

Query: 150 RAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTD---FSPLHFAVVK 206
             +  +  T + A +           +I+ +L+  GA    +    +         A   
Sbjct: 134 NQQNKLGDTALHAAAWKGYA------DIVQLLLAKGARTDLR----NIEKKLAFDMATNA 183

Query: 207 KNLSVVELLIKCKADTNLI 225
              S+++      A   L 
Sbjct: 184 ACASLLKKKQGTDAVRTLS 202

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  111 bits (280), Expect = 5e-28
 Identities = 23/214 (10%), Positives = 61/214 (28%), Gaps = 15/214 (7%)

Query: 84  NEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLL 143
            + ++ G+  ++ A+     +    L     ++    +   T        G   ++    
Sbjct: 6   PKPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNY 65

Query: 144 SKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFA 203
             +            P+   +   +         +   ++N   V         + L++A
Sbjct: 66  VAEQAESID-----NPLHEAAKRGNL------SWLRECLDNRVGVNGLDKA-GSTALYWA 113

Query: 204 VVKKNLSVVELLI-KCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDG 262
               +  +VE+L  +   + N   K+     L  A       IV+  L +K     + + 
Sbjct: 114 CHGGHKDIVEMLFTQPNIELNQQNKLGDTA-LHAAAWKGYADIVQ-LLLAKGARTDLRNI 171

Query: 263 DLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
           +       A +     +++            N  
Sbjct: 172 EKKLAFDMATNAACASLLKKKQGTDAVRTLSNAE 205

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  103 bits (259), Expect = 3e-25
 Identities = 34/255 (13%), Positives = 73/255 (28%), Gaps = 63/255 (24%)

Query: 380 TPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIE 439
             +  A    + ++   L  +  ++                     +             
Sbjct: 14  VKVFRALYTFEPRTPDELYIEEGDIIYITDMS-------------DTNWWKGTSK----- 55

Query: 440 MVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE---- 495
             +  L+    V +   +    PL  A + G+   ++E  +    ++      +K     
Sbjct: 56  -GRTGLIPSNYVAEQ-AESIDNPLHEAAKRGNLSWLRECLDNRVGVNG----LDKAGSTA 109

Query: 496 ---AARIAH-STTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERR 551
              A    H    E+        L                       +    +N  ++  
Sbjct: 110 LYWACHGGHKDIVEM--------LFT---------------------QPNIELNQQNKLG 140

Query: 552 GSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYY 611
            +AL   AWKGY +IV LLL  GA  + ++     A  MA    +  ++++K     A  
Sbjct: 141 DTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATN-AACASLLKKKQGTDAVR 199

Query: 612 DMKDGKTGKTPLKHA 626
            + +        + +
Sbjct: 200 TLSN-AEDYLDDEDS 213

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 97.3 bits (243), Expect = 4e-23
 Identities = 34/259 (13%), Positives = 73/259 (28%), Gaps = 68/259 (26%)

Query: 199 PLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVS 258
            +  A+        + L   + D   I  ++               ++       +  V+
Sbjct: 15  KVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWK-GTSKGRTGLI------PSNYVA 67

Query: 259 ISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYL 318
                +++ LH+A   GNL  ++  +  +  +N  ++     +++A   G  H  + E L
Sbjct: 68  EQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGG--HKDIVEML 125

Query: 319 LQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDM 378
             Q +I                                              +N +    
Sbjct: 126 FTQPNI---------------------------------------------ELNQQNKLG 140

Query: 379 ITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNI 438
            T L  AA        + L+ KGA  +L   +K             + A   A  +    
Sbjct: 141 DTALHAAAWKGYADIVQLLLAKGARTDLRNIEK-------------KLAFDMAT-NAACA 186

Query: 439 EMVKLLLLHGADVNDTSNK 457
            ++K      A    ++ +
Sbjct: 187 SLLKKKQGTDAVRTLSNAE 205

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 96.2 bits (240), Expect = 1e-22
 Identities = 33/215 (15%), Positives = 67/215 (31%), Gaps = 36/215 (16%)

Query: 425 RSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQ 484
           +  +  A  +         L +   D+                  G   ++         
Sbjct: 13  QVKVFRAL-YTFEPRTPDELYIEEGDIIYI-TDMSDTNWWKGTSKGRTGLIPSNYVAEQA 70

Query: 485 IDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACV 544
              +N L   EAA+                                   +++ +++   V
Sbjct: 71  ESIDNPLH--EAAK-----------------------------RGNLSWLRECLDNRVGV 99

Query: 545 NVSSERRGSALIYVAWKGYEEIVDLLLDN-GADVNFKSATGFTALHMACRFHSNDNIVRK 603
           N   +   +AL +    G+++IV++L      ++N ++  G TALH A       +IV+ 
Sbjct: 100 NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW-KGYADIVQL 158

Query: 604 LLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
           LL  GA  D+++    K     A       ++   
Sbjct: 159 LLAKGARTDLRN-IEKKLAFDMATNAACASLLKKK 192

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 86.1 bits (214), Expect = 3e-19
 Identities = 30/243 (12%), Positives = 58/243 (23%), Gaps = 61/243 (25%)

Query: 359 QIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDAR 418
           +    +     +I    D   T                 +     V              
Sbjct: 26  RTPDELYIEEGDIIYITDMSDTNWWKGTSKGRT-----GLIPSNYVAEQ----------- 69

Query: 419 SSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKEL 478
                  + L  A K + N+  ++  L +   VN   +K     L  A   G   IV+ L
Sbjct: 70  --AESIDNPLHEAAK-RGNLSWLRECLDNRVGVN-GLDKAGSTALYWACHGGHKDIVEML 125

Query: 479 -QNYGAQIDKENYLKNKE-------AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNK 530
                 ++++    +NK        AA   +          I  LL              
Sbjct: 126 FTQPNIELNQ----QNKLGDTALHAAAWKGY--------ADIVQLL-------------- 159

Query: 531 YDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHM 590
                  +  GA  ++ +  +  A           ++       A     +A  +     
Sbjct: 160 -------LAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDYLDDED 212

Query: 591 ACR 593
           +  
Sbjct: 213 SDL 215

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 86.1 bits (214), Expect = 3e-19
 Identities = 38/272 (13%), Positives = 73/272 (26%), Gaps = 73/272 (26%)

Query: 234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQ 293
           +F A+ +   +  +  L  +  D+       ++   K    G   ++         +  Q
Sbjct: 16  VFRALYTFEPRTPD-ELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSN-----YVAEQ 69

Query: 294 NRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQ 353
                 P+  A   G  +       L                                  
Sbjct: 70  AESIDNPLHEAAKRG--NLSWLRECLDNRV------------------------------ 97

Query: 354 IKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLI-QKGANVNLTETQKA 412
                            +N       T L +A         + L  Q    +N       
Sbjct: 98  ----------------GVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLG- 140

Query: 413 FISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDF 472
                        +AL  A   K   ++V+LLL  GA  +   N  K+    +A  +   
Sbjct: 141 ------------DTALHAAA-WKGYADIVQLLLAKGARTD-LRNIEKKLAFDMATNAACA 186

Query: 473 QIVKELQNYGAQI---DKENYLKNKEAARIAH 501
            ++K+ Q   A     + E+YL ++++    H
Sbjct: 187 SLLKKKQGTDAVRTLSNAEDYLDDEDSDLEHH 218

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 79.2 bits (196), Expect = 8e-17
 Identities = 38/188 (20%), Positives = 58/188 (30%), Gaps = 42/188 (22%)

Query: 456 NKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNK---EAARIAHSTTELEERKKI 512
            KP Q  +  A+ + + +   EL      I     + +    +                 
Sbjct: 9   VKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGR----------- 57

Query: 513 NDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLD 572
                                    +     V   +E   + L   A +G    +   LD
Sbjct: 58  -----------------------TGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLD 94

Query: 573 NGADVNFKSATGFTALHMACRFHSNDNIVRKLL-HHGAYYDMKDGKTGKTPLKHAEAGKN 631
           N   VN     G TAL+ AC    + +IV  L        + ++ K G T L HA A K 
Sbjct: 95  NRVGVNGLDKAGSTALYWACH-GGHKDIVEMLFTQPNIELNQQN-KLGDTAL-HAAAWKG 151

Query: 632 R-DIIDLL 638
             DI+ LL
Sbjct: 152 YADIVQLL 159

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 66.5 bits (163), Expect = 2e-12
 Identities = 13/77 (16%), Positives = 25/77 (32%), Gaps = 1/77 (1%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           T L +A W      V+ LL+ G    + +  + + A  MA       ++       A   
Sbjct: 142 TALHAAAWKGYADIVQLLLAKGA-RTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRT 200

Query: 118 DRDEKGYTPLHLACYLG 134
             + + Y     +    
Sbjct: 201 LSNAEDYLDDEDSDLEH 217

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  108 bits (272), Expect = 6e-28
 Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 13/132 (9%)

Query: 89  DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKAD 148
           D    L  A   G    V +L+ +GA+VN +DE G TPL+LA   G+  IV+ LL   AD
Sbjct: 13  DLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD 72

Query: 149 VRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTD---FSPLHFAVV 205
           V A  ++  TP+   +           EI  +L+++GA+V  +    D    +    ++ 
Sbjct: 73  VNAVDAIGFTPLHLAAFIGHL------EIAEVLLKHGADVNAQ----DKFGKTAFDISIG 122

Query: 206 KKNLSVVELLIK 217
             N  + E+L K
Sbjct: 123 NGNEDLAEILQK 134

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 89.8 bits (224), Expect = 2e-21
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           T L  A     +  VE LL  G  DVN     G T L++A   G  ++  +L+ HGA+VN
Sbjct: 49  TPLYLATAHGHLEIVEVLLKNGA-DVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVN 107

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLS 144
            +D+ G T   ++   GN+++ + L  
Sbjct: 108 AQDKFGKTAFDISIGNGNEDLAEILQK 134

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 85.5 bits (213), Expect = 6e-20
 Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 22/149 (14%)

Query: 109 LIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMS 168
             HHG+++          L  A   G  + V+ L++  ADV AK    +TP+   +A+  
Sbjct: 7   HHHHGSDLG-------KKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGH 59

Query: 169 EDSTDTNEIISMLIENGANVREKMPFTD---FSPLHFAVVKKNLSVVELLIKCKADTNLI 225
                  EI+ +L++NGA+V       D   F+PLH A    +L + E+L+K  AD N  
Sbjct: 60  L------EIVEVLLKNGADVNAV----DAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQ 109

Query: 226 VKVNQEPLLFFAIESNSVKIVEAFLNSKN 254
            K  +      +I + +  + E  L   N
Sbjct: 110 DKFGKTA-FDISIGNGNEDLAE-ILQKLN 136

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 83.2 bits (207), Expect = 4e-19
 Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 2/113 (1%)

Query: 526 VRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGF 585
            R+ + DEV+  + +GA VN   E   + L      G+ EIV++LL NGADVN   A GF
Sbjct: 22  ARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGF 81

Query: 586 TALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
           T LH+A      + I   LL HGA  + +D K GKT    +    N D+ ++L
Sbjct: 82  TPLHLAAFIGHLE-IAEVLLKHGADVNAQD-KFGKTAFDISIGNGNEDLAEIL 132

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 74.7 bits (185), Expect = 4e-16
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 9/102 (8%)

Query: 537 NIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHS 596
           +   G+ +          L+  A  G ++ V +L+ NGADVN K   G T L++A     
Sbjct: 7   HHHHGSDLG-------KKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGH 59

Query: 597 NDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
            + IV  LL +GA  +  D   G TPL  A    + +I ++L
Sbjct: 60  LE-IVEVLLKNGADVNAVD-AIGFTPLHLAAFIGHLEIAEVL 99

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 70.9 bits (175), Expect = 8e-15
 Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 15/121 (12%)

Query: 369 ENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSAL 428
            + +  G D+   LL AA+       + L+  GA+VN             + D    + L
Sbjct: 5   HHHHHHGSDLGKKLLEAARAGQDDEVRILMANGADVN-------------AKDEYGLTPL 51

Query: 429 QYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKE 488
             A  H  ++E+V++LL +GADVN   +     PL +A   G  +I + L  +GA ++ +
Sbjct: 52  YLATAH-GHLEIVEVLLKNGADVNAV-DAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQ 109

Query: 489 N 489
           +
Sbjct: 110 D 110

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 69.7 bits (172), Expect = 2e-14
 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 15/109 (13%)

Query: 370 NINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQ 429
           ++NA+ +  +TPL  A  H  L+  + L++ GA+VN             + D    + L 
Sbjct: 39  DVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVN-------------AVDAIGFTPLH 85

Query: 430 YACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKEL 478
            A     ++E+ ++LL HGADVN   +K  +    ++I +G+  + + L
Sbjct: 86  LAA-FIGHLEIAEVLLKHGADVN-AQDKFGKTAFDISIGNGNEDLAEIL 132

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 62.8 bits (154), Expect = 4e-12
 Identities = 38/193 (19%), Positives = 66/193 (34%), Gaps = 63/193 (32%)

Query: 256 DVSISDG-DLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHV 314
                 G DL   L +A   G    V++L+    D+NA++ Y L P++ A   G  H  +
Sbjct: 5   HHHHHHGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHG--HLEI 62

Query: 315 AEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAE 374
            E LL+  +                                              ++NA 
Sbjct: 63  VEVLLKNGA----------------------------------------------DVNAV 76

Query: 375 GDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKH 434
                TPL  AA    L+ A+ L++ GA+VN             + D   ++A   +  +
Sbjct: 77  DAIGFTPLHLAAFIGHLEIAEVLLKHGADVN-------------AQDKFGKTAFDISIGN 123

Query: 435 KNNIEMVKLLLLH 447
             N ++ ++L   
Sbjct: 124 -GNEDLAEILQKL 135

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 60.1 bits (147), Expect = 5e-11
 Identities = 33/188 (17%), Positives = 65/188 (34%), Gaps = 62/188 (32%)

Query: 391 LQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGAD 450
           ++ + +    G+++                       L  A +     + V++L+ +GAD
Sbjct: 1   MRGSHHHHHHGSDLG--------------------KKLLEAAR-AGQDDEVRILMANGAD 39

Query: 451 VNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE-------AARIAHST 503
           VN   ++    PL +A   G  +IV+ L   GA ++      +         AA I H  
Sbjct: 40  VNAK-DEYGLTPLYLATAHGHLEIVEVLLKNGADVNA----VDAIGFTPLHLAAFIGH-- 92

Query: 504 TELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGY 563
                  +I ++L                     ++ GA VN   +   +A       G 
Sbjct: 93  ------LEIAEVL---------------------LKHGADVNAQDKFGKTAFDISIGNGN 125

Query: 564 EEIVDLLL 571
           E++ ++L 
Sbjct: 126 EDLAEILQ 133

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 49.7 bits (120), Expect = 2e-07
 Identities = 34/218 (15%), Positives = 65/218 (29%), Gaps = 91/218 (41%)

Query: 181 LIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIES 240
              +G+++ +         L  A        V +L+   AD                   
Sbjct: 7   HHHHGSDLGK--------KLLEAARAGQDDEVRILMANGAD------------------- 39

Query: 241 NSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPP 300
                    +N+K+       G   + L+ A   G+L+IV++L+K   D+NA +     P
Sbjct: 40  ---------VNAKD-----EYG--LTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTP 83

Query: 301 MFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQI 360
           +  A  +G  H  +AE LL+  +                                     
Sbjct: 84  LHLAAFIG--HLEIAEVLLKHGA------------------------------------- 104

Query: 361 IKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLI 398
                    ++NA+     T    +  + +   A+ L 
Sbjct: 105 ---------DVNAQDKFGKTAFDISIGNGNEDLAEILQ 133

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 43.1 bits (103), Expect = 4e-05
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHH 112
           T L  A +   +   E LL  G  DVN + + G+TA  ++I  G   +  +L   
Sbjct: 82  TPLHLAAFIGHLEIAEVLLKHG-ADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  107 bits (270), Expect = 3e-26
 Identities = 45/266 (16%), Positives = 86/266 (32%), Gaps = 52/266 (19%)

Query: 58  TLLCSAVWDNKIREV----EFLLSTGDHDVNEKLQD---GRTALYMAIL---QGLYKMVT 107
             +  AV  +  +E+     FL  +     + + +D   G+T L  A+L    G    + 
Sbjct: 15  RSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIA 74

Query: 108 LLIHHGA-----------NVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMM 156
           LL+               +  D   KG T LH+A    N  +V  L+   ADV+A  +  
Sbjct: 75  LLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGD 134

Query: 157 VTPILAVSANMSEDST------DTN--EIISMLIENG---ANVREKMPFTDFSPLHFAVV 205
                                  TN   I+  L++N    A++  +      + LH  V 
Sbjct: 135 FFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSV-GNTVLHALVE 193

Query: 206 KKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLN 265
             + +V            +++                     A L+       I++    
Sbjct: 194 VADNTVDNTKFVTSMYNEILILG-------------------AKLHPTLKLEEITNRKGL 234

Query: 266 SLLHKACHVGNLQIVQMLVKRKFDIN 291
           + L  A   G + ++  +++R+    
Sbjct: 235 TPLALAASSGKIGVLAYILQREIHEP 260

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 97.9 bits (244), Expect = 8e-23
 Identities = 47/343 (13%), Positives = 99/343 (28%), Gaps = 97/343 (28%)

Query: 77  STGDHDVNEKLQDGRTALYMAI-------LQGLYKMVTLLIHHGANVNDRD-EKGYTPLH 128
           S    +   +L D R +++ A+       L+ L   +        +   +D E G T L 
Sbjct: 1   SVSAGEKPPRLYD-RRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLL 59

Query: 129 LA---CYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENG 185
            A    + G  + +  LL                                + +   +   
Sbjct: 60  KAMLNLHNGQNDTIALLLDVARKT--------------------------DSLKQFV--N 91

Query: 186 ANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKI 245
           A+  +   +   + LH A+ ++N+++V LL++  AD                        
Sbjct: 92  ASYTDS-YYKGQTALHIAIERRNMTLVTLLVENGADVQ-------------------AAA 131

Query: 246 VEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKF---DINAQNRYFLPPMF 302
              F            G+L   L  A     L IV+ L++  +   DI+A++      + 
Sbjct: 132 NGDFFKKTKGRPGFYFGELP--LSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLH 189

Query: 303 FAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIK 362
             + +        +++               N +L                         
Sbjct: 190 ALVEVADNTVDNTKFV-----------TSMYNEILILG---------------------A 217

Query: 363 RIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVN 405
           ++    +         +TPL  AA    +    Y++Q+  +  
Sbjct: 218 KLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEP 260

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 93.7 bits (233), Expect = 2e-21
 Identities = 44/268 (16%), Positives = 89/268 (33%), Gaps = 47/268 (17%)

Query: 354 IKRLDQIIKRIIDRTENINA-EGDDMITPLLFAAKHC---DLQSAKYLIQKGANVNLTET 409
           ++ L   ++R   R  +    + +   T LL A  +       +   L+      +    
Sbjct: 29  LESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTD--SL 86

Query: 410 QKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQK-------- 461
           ++   +    S +  ++AL  A + + N+ +V LL+ +GADV   +N    K        
Sbjct: 87  KQFVNASYTDSYYKGQTALHIAIE-RRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGF 145

Query: 462 -----PLAVAIQSGDFQIVKELQNYG---AQIDKENYLKN---KEAARIAHSTTELEERK 510
                PL++A  +    IVK L       A I   + + N        +A +T +     
Sbjct: 146 YFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVD----- 200

Query: 511 KINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLL 570
                   N  F+ ++ +       K         +++ +  + L   A  G   ++  +
Sbjct: 201 --------NTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYI 252

Query: 571 LDNGADVNFKSATGFTALHMACRF-HSN 597
           L                 H A    H +
Sbjct: 253 LQREIH-------EPECRHAAAHHHHHH 273

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 82.9 bits (205), Expect = 1e-17
 Identities = 38/306 (12%), Positives = 70/306 (22%), Gaps = 95/306 (31%)

Query: 370 NINAEGDDMITPLLFAAKHCD-------LQSAKYLIQKGANVNLTETQKAFISDARSSDF 422
                       +  A    +       L   +   ++  +    + +            
Sbjct: 5   GEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETG---------- 54

Query: 423 CFRSALQYA--CKHKNNIEMVKLLLLHGADVNDT----------SNKPKQKPLAVAIQSG 470
             ++ L  A    H    + + LLL      +            S    Q  L +AI+  
Sbjct: 55  --KTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERR 112

Query: 471 DFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNK 530
           +  +V  L   GA +                                             
Sbjct: 113 NMTLVTLLVENGADVQAAA----------------------------------------- 131

Query: 531 YDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNG---ADVNFKSATGFTA 587
                 +                 L   A      IV  LL N    AD++ + + G T 
Sbjct: 132 ----NGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTV 187

Query: 588 LHMACRFHSND---------------NIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNR 632
           LH       N                 +  KL       ++ + + G TPL  A +    
Sbjct: 188 LHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITN-RKGLTPLALAASSGKI 246

Query: 633 DIIDLL 638
            ++  +
Sbjct: 247 GVLAYI 252

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 67.1 bits (164), Expect = 2e-12
 Identities = 39/218 (17%), Positives = 70/218 (32%), Gaps = 34/218 (15%)

Query: 447 HGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTEL 506
             A          ++ +  A+   + Q ++ L  +  +  K   L + E        T L
Sbjct: 2   VSAGEKP-PRLYDRRSIFDAVAQSNCQELESLLPFLQRSKK--RLTDSEFKDPETGKTCL 58

Query: 507 -----EERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWK 561
                      ND + L LD  +       D +K+ +   A    S  +  +AL     +
Sbjct: 59  LKAMLNLHNGQNDTIALLLDVARKT-----DSLKQFV--NASYTDSYYKGQTALHIAIER 111

Query: 562 GYEEIVDLLLDNGADVNFKS--------------ATGFTALHMACRFHSNDNIVRKLLHH 607
               +V LL++NGADV   +                G   L +A    +   IV+ LL +
Sbjct: 112 RNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAAC-TNQLAIVKFLLQN 170

Query: 608 GAYY---DMKDGKTGKTPLKHAEAGKNRDIIDLLHLID 642
                    +D   G T L       +  + +   +  
Sbjct: 171 SWQPADISARD-SVGNTVLHALVEVADNTVDNTKFVTS 207

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 51.3 bits (123), Expect = 4e-07
 Identities = 11/85 (12%), Positives = 29/85 (34%), Gaps = 8/85 (9%)

Query: 53  KSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHH 112
            +V+ T   +++++  +     L  T         + G T L +A   G   ++  ++  
Sbjct: 197 NTVDNTKFVTSMYNEILILGAKLHPTLK-LEEITNRKGLTPLALAASSGKIGVLAYILQR 255

Query: 113 GANVNDRDEKGYTPLHLACYLGNKN 137
             +            H A +  + +
Sbjct: 256 EIH-------EPECRHAAAHHHHHH 273

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  100 bits (251), Expect = 2e-25
 Identities = 42/95 (44%), Positives = 57/95 (60%), Gaps = 1/95 (1%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           T L +A  +    EV+ LLS G  DVN + +DG T L++A   G  ++V LL+  GA+VN
Sbjct: 11  TPLHNAAKNGHAEEVKKLLSKGA-DVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN 69

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAK 152
            R + G TP HLA   G+  IVK L +K ADV A+
Sbjct: 70  ARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNAR 104

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 98.6 bits (247), Expect = 7e-25
 Identities = 42/111 (37%), Positives = 54/111 (48%), Gaps = 8/111 (7%)

Query: 81  HDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVK 140
           H    K  DG T L+ A   G  + V  L+  GA+VN R + G TPLHLA   G+  IVK
Sbjct: 2   HMWGSK--DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVK 59

Query: 141 FLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREK 191
            LL+K ADV A+     TP      N         EI+ +L   GA+V  +
Sbjct: 60  LLLAKGADVNARSKDGNTPEHLAKKNGHH------EIVKLLDAKGADVNAR 104

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 75.9 bits (188), Expect = 7e-17
 Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 2/88 (2%)

Query: 538 IEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSN 597
           +  GA VN  S+   + L   A  G+ EIV LLL  GADVN +S  G T  H+A +   +
Sbjct: 29  LSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHH 88

Query: 598 DNIVRKLLHHGAYYDMKDGKTGKTPLKH 625
           + IV+ L   GA  + +          H
Sbjct: 89  E-IVKLLDAKGADVNARS-WGSSHHHHH 114

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 74.3 bits (184), Expect = 3e-16
 Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 2/85 (2%)

Query: 554 ALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDM 613
            L   A  G+ E V  LL  GADVN +S  G T LH+A + + +  IV+ LL  GA  + 
Sbjct: 12  PLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAK-NGHAEIVKLLLAKGADVNA 70

Query: 614 KDGKTGKTPLKHAEAGKNRDIIDLL 638
           +  K G TP   A+   + +I+ LL
Sbjct: 71  RS-KDGNTPEHLAKKNGHHEIVKLL 94

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 72.4 bits (179), Expect = 1e-15
 Identities = 40/184 (21%), Positives = 58/184 (31%), Gaps = 77/184 (41%)

Query: 113 GANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDST 172
           G     +D  G TPLH A   G+   VK LLSK ADV A+                    
Sbjct: 1   GHMWGSKD--GNTPLHNAAKNGHAEEVKKLLSKGADVNAR-------------------- 38

Query: 173 DTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEP 232
             +                      +PLH A    +  +V+LL+   AD N         
Sbjct: 39  SKD--------------------GNTPLHLAAKNGHAEIVKLLLAKGADVN--------- 69

Query: 233 LLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINA 292
                                         D N+  H A   G+ +IV++L  +  D+NA
Sbjct: 70  --------------------------ARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNA 103

Query: 293 QNRY 296
           ++  
Sbjct: 104 RSWG 107

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 71.6 bits (177), Expect = 2e-15
 Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 17/121 (14%)

Query: 370 NINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQ 429
              ++  D  TPL  AAK+   +  K L+ KGA+VN             +      + L 
Sbjct: 3   MWGSK--DGNTPLHNAAKNGHAEEVKKLLSKGADVN-------------ARSKDGNTPLH 47

Query: 430 YACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
            A     + E+VKLLL  GADVN  S      P  +A ++G  +IVK L   GA ++  +
Sbjct: 48  LAA-KNGHAEIVKLLLAKGADVNARSKD-GNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105

Query: 490 Y 490
           +
Sbjct: 106 W 106

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 68.6 bits (169), Expect = 3e-14
 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 1/71 (1%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           T L  A  +     V+ LL+ G  DVN + +DG T  ++A   G +++V LL   GA+VN
Sbjct: 44  TPLHLAAKNGHAEIVKLLLAKGA-DVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVN 102

Query: 118 DRDEKGYTPLH 128
            R        H
Sbjct: 103 ARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 49.7 bits (120), Expect = 1e-07
 Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 4/94 (4%)

Query: 234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQ 293
           L  A ++   + V+  L SK  DV+    D N+ LH A   G+ +IV++L+ +  D+NA+
Sbjct: 13  LHNAAKNGHAEEVK-KLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNAR 71

Query: 294 NRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVN 327
           ++    P   A   G  H  + + L  + + +VN
Sbjct: 72  SKDGNTPEHLAKKNG--HHEIVKLLDAKGA-DVN 102

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 43.5 bits (104), Expect = 2e-05
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 4/65 (6%)

Query: 574 GADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRD 633
           G     K   G T LH A + + +   V+KLL  GA  + +  K G TPL  A    + +
Sbjct: 1   GHMWGSKD--GNTPLHNAAK-NGHAEEVKKLLSKGADVNARS-KDGNTPLHLAAKNGHAE 56

Query: 634 IIDLL 638
           I+ LL
Sbjct: 57  IVKLL 61

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 99.4 bits (249), Expect = 5e-25
 Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 7/125 (5%)

Query: 89  DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKAD 148
                   A+  G    V   +  G +VN   E G  PLH A   G   I++FLL K AD
Sbjct: 6   MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD 65

Query: 149 VRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKN 208
           + A     +TP+L+               + +L+  GA+   K P    +       +  
Sbjct: 66  INAPDKHHITPLLSAVYEGHV------SCVKLLLSKGADKTVKGPD-GLTAFEATDNQAI 118

Query: 209 LSVVE 213
            ++++
Sbjct: 119 KALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 97.1 bits (243), Expect = 3e-24
 Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 1/95 (1%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
                A+ +  + EV+  ++ G+ DVN  L+ GR  L+ A   G  +++  L+  GA++N
Sbjct: 9   KEFMWALKNGDLDEVKDYVAKGE-DVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADIN 67

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAK 152
             D+   TPL  A Y G+ + VK LLSK AD   K
Sbjct: 68  APDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVK 102

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 81.3 bits (202), Expect = 1e-18
 Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 2/104 (1%)

Query: 532 DEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMA 591
           DEVK  +  G  VN + E     L Y A  G  EI++ LL  GAD+N       T L  A
Sbjct: 21  DEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSA 80

Query: 592 CRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDII 635
                + + V+ LL  GA   +K    G T  +  +    + ++
Sbjct: 81  VY-EGHVSCVKLLLSKGADKTVKG-PDGLTAFEATDNQAIKALL 122

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 74.4 bits (184), Expect = 3e-16
 Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 1/83 (1%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
             L  A    ++  +EFLL  G  D+N   +   T L  A+ +G    V LL+  GA+  
Sbjct: 42  KPLHYAADCGQLEILEFLLLKGA-DINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKT 100

Query: 118 DRDEKGYTPLHLACYLGNKNIVK 140
            +   G T          K +++
Sbjct: 101 VKGPDGLTAFEATDNQAIKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 74.4 bits (184), Expect = 4e-16
 Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 18/119 (15%)

Query: 371 INAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQY 430
           + +  D      ++A K+ DL   K  + KG +VN              +    R  L Y
Sbjct: 3   LGSMCD---KEFMWALKNGDLDEVKDYVAKGEDVN-------------RTLEGGRKPLHY 46

Query: 431 ACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
           A      +E+++ LLL GAD+N   +K    PL  A+  G    VK L + GA    + 
Sbjct: 47  AADC-GQLEILEFLLLKGADIN-APDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKG 103

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 69.7 bits (172), Expect = 1e-14
 Identities = 22/86 (25%), Positives = 31/86 (36%), Gaps = 4/86 (4%)

Query: 554 ALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDM 613
             ++    G  + V   +  G DVN     G   LH A        I+  LL  GA  + 
Sbjct: 10  EFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAAD-CGQLEILEFLLLKGADINA 68

Query: 614 KDGKTGKTPLKHAEAGKNR-DIIDLL 638
            D K   TPL  +   +     + LL
Sbjct: 69  PD-KHHITPL-LSAVYEGHVSCVKLL 92

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 65.5 bits (161), Expect = 4e-13
 Identities = 24/117 (20%), Positives = 44/117 (37%), Gaps = 15/117 (12%)

Query: 360 IIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARS 419
            +K  + + E++N   +    PL +AA    L+  ++L+ KGA++N           A  
Sbjct: 22  EVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADIN-----------APD 70

Query: 420 SDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVK 476
                 + L  A   + ++  VKLLL  GAD                       +++
Sbjct: 71  KHHI--TPLLSAVY-EGHVSCVKLLLSKGADKT-VKGPDGLTAFEATDNQAIKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 60.5 bits (148), Expect = 2e-11
 Identities = 27/138 (19%), Positives = 41/138 (29%), Gaps = 48/138 (34%)

Query: 268 LHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVN 327
              A   G+L  V+  V +  D+N        P+ +A   G     + E+LL + +    
Sbjct: 11  FMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCG--QLEILEFLLLKGA---- 64

Query: 328 LPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAK 387
                                                     +INA     ITPLL A  
Sbjct: 65  ------------------------------------------DINAPDKHHITPLLSAVY 82

Query: 388 HCDLQSAKYLIQKGANVN 405
              +   K L+ KGA+  
Sbjct: 83  EGHVSCVKLLLSKGADKT 100

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 58.9 bits (144), Expect = 7e-11
 Identities = 26/174 (14%), Positives = 44/174 (25%), Gaps = 75/174 (43%)

Query: 123 GYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLI 182
                  A   G+ + VK  ++K  DV                                +
Sbjct: 7   CDKEFMWALKNGDLDEVKDYVAKGEDVNRT-----------------------------L 37

Query: 183 ENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNS 242
           E G             PLH+A     L ++E L+   AD N                   
Sbjct: 38  EGG-----------RKPLHYAADCGQLEILEFLLLKGADIN------------------- 67

Query: 243 VKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
                             D    + L  A + G++  V++L+ +  D   +   
Sbjct: 68  ----------------APDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPD 105

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 54.3 bits (132), Expect = 3e-09
 Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 3/88 (3%)

Query: 234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQ 293
             +A+++  +  V+    +K  DV+ +       LH A   G L+I++ L+ +  DINA 
Sbjct: 11  FMWALKNGDLDEVK-DYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAP 69

Query: 294 NRYFLPPMFFAIGMGRKHTHVAEYLLQQ 321
           +++ + P+  A+  G  H    + LL +
Sbjct: 70  DKHHITPLLSAVYEG--HVSCVKLLLSK 95

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 49.7 bits (120), Expect = 1e-07
 Identities = 31/141 (21%), Positives = 48/141 (34%), Gaps = 28/141 (19%)

Query: 427 ALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQID 486
              +A K   +++ VK  +  G DVN T     +KPL  A   G  +I++ L   GA I+
Sbjct: 10  EFMWALK-NGDLDEVKDYVAKGEDVNRTLEG-GRKPLHYAADCGQLEILEFLLLKGADIN 67

Query: 487 KENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNV 546
                 +K      H  T L                L  V       VK  +  GA   V
Sbjct: 68  A----PDK------HHITPL----------------LSAVYEGHVSCVKLLLSKGADKTV 101

Query: 547 SSERRGSALIYVAWKGYEEIV 567
                 +A      +  + ++
Sbjct: 102 KGPDGLTAFEATDNQAIKALL 122

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  103 bits (259), Expect = 6e-25
 Identities = 45/278 (16%), Positives = 79/278 (28%), Gaps = 67/278 (24%)

Query: 58  TLLCSAVWDNKIREV----EFLLSTGDH---DVNEKLQDGRTALYMAIL---QGLYKMVT 107
             L S V      E+    E+L     +       +   G+T L  A+L    G+   + 
Sbjct: 4   DRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIM 63

Query: 108 LLIHHG-----------ANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMM 156
            L+              A   D   +G++ LH+A    +   VK L+   ADV  +    
Sbjct: 64  PLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGR 123

Query: 157 VTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLI 216
                                                     PL  A   K   VV  L+
Sbjct: 124 FFQ-KHQGTCFYFGEL--------------------------PLSLAACTKQWDVVTYLL 156

Query: 217 K---CKADTNLIVKVNQEPL---------------LFFAIESNSVKIVEAFLNSKNFDVS 258
           +     A       +    L               L   +    +++    L        
Sbjct: 157 ENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGA-RLCPTVQLEE 215

Query: 259 ISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
           IS+    + L  A   G ++I + +++R+F   A + +
Sbjct: 216 ISNHQGLTPLKLAAKEGKIEIFRHILQREFSGAAAHHH 253

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 89.5 bits (222), Expect = 4e-20
 Identities = 48/338 (14%), Positives = 87/338 (25%), Gaps = 97/338 (28%)

Query: 90  GRTALYMAILQGLYKMVTLLIHH--------GANVNDRDEKGYTPLHLA---CYLGNKNI 138
            R  L+  + +G+ + +T L+ +          +       G T L  A      G    
Sbjct: 2   DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNAC 61

Query: 139 VKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFS 198
           +  LL    D          P   V+A  +++                           S
Sbjct: 62  IMPLLQIDKDSGN-------PKPLVNAQCTDEFYQ----------------------GHS 92

Query: 199 PLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVS 258
            LH A+ K++L  V+LL++  AD +L                                  
Sbjct: 93  ALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQK----------------------HQG 130

Query: 259 ISDGDLNSLLHKACHVGNLQIVQMLVKRKF---DINAQNRYFLPPMFFAIGMGRKHTHVA 315
                    L  A       +V  L++       + A +             G    H  
Sbjct: 131 TCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSL-----------GNTVLHAL 179

Query: 316 EYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEG 375
             +      N  L I   + LL                         R+    +      
Sbjct: 180 VMIADNSPENSALVIHMYDGLLQMG---------------------ARLCPTVQLEEISN 218

Query: 376 DDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAF 413
              +TPL  AAK   ++  ++++Q+  +          
Sbjct: 219 HQGLTPLKLAAKEGKIEIFRHILQREFSGAAAHHHHHH 256

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 88.7 bits (220), Expect = 8e-20
 Identities = 45/271 (16%), Positives = 83/271 (30%), Gaps = 65/271 (23%)

Query: 357 LDQIIKRIIDRTENINAEGDDMITPLLFAAKHC---DLQSAKYLIQKGANVNLTETQKAF 413
           L+ +       T++   EG    T L+ A  +           L+Q   +    +     
Sbjct: 22  LEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN- 80

Query: 414 ISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVN------------DTSNKPKQK 461
            +      +   SAL  A + K +++ VKLL+ +GADV+             T     + 
Sbjct: 81  -AQCTDEFYQGHSALHIAIE-KRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGEL 138

Query: 462 PLAVAIQSGDFQIVKEL---QNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKL 518
           PL++A  +  + +V  L    +  A ++  + L N          T L            
Sbjct: 139 PLSLAACTKQWDVVTYLLENPHQPASLEATDSLGN----------TVL------------ 176

Query: 519 NLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVN 578
                                    +   +    SAL+   + G  ++   L        
Sbjct: 177 ---------------------HALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEE 215

Query: 579 FKSATGFTALHMACRFHSNDNIVRKLLHHGA 609
             +  G T L +A +      I R +L    
Sbjct: 216 ISNHQGLTPLKLAAK-EGKIEIFRHILQREF 245

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 80.2 bits (198), Expect = 7e-17
 Identities = 40/290 (13%), Positives = 64/290 (22%), Gaps = 82/290 (28%)

Query: 379 ITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYA--CKHKN 436
              L         +    L++      L    K     A +     ++ L  A       
Sbjct: 3   RDRLFSVVSRGVPEELTGLLEY-----LRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDG 57

Query: 437 NIEMVKLLLLHGADVNDT----------SNKPKQKPLAVAIQSGDFQIVKELQNYGAQID 486
               +  LL    D  +                   L +AI+    Q VK L   GA + 
Sbjct: 58  VNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVH 117

Query: 487 KENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNV 546
                                                +                G     
Sbjct: 118 L------------------------------------RACGRFFQKHQGTCFYFGE---- 137

Query: 547 SSERRGSALIYVAWKGYEEIVDLLLDNG---ADVNFKSATGFTALHMACRFHSNDN---- 599
                   L   A     ++V  LL+N    A +    + G T LH       N      
Sbjct: 138 ------LPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSA 191

Query: 600 -----------IVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
                      +  +L       ++ +   G TPLK A      +I   +
Sbjct: 192 LVIHMYDGLLQMGARLCPTVQLEEISN-HQGLTPLKLAAKEGKIEIFRHI 240

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 69.8 bits (171), Expect = 2e-13
 Identities = 39/293 (13%), Positives = 73/293 (24%), Gaps = 72/293 (24%)

Query: 196 DFSPLHFAVVKKNLSVVELLIK--CKADTNLIVKVNQE------PLLFFAIES--NSVKI 245
           D   L   V +     +  L++        L      E       L+   +         
Sbjct: 2   DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNAC 61

Query: 246 VEAFLN----------SKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNR 295
           +   L             N   +      +S LH A    +LQ V++LV+   D++ +  
Sbjct: 62  IMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRAC 121

Query: 296 YFLPPMFFAIGMGRK-----------HTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLK 344
                                        V  YLL+      +L     + L +TV+   
Sbjct: 122 GRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEAT--DSLGNTVLHA- 178

Query: 345 DPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANV 404
                                     + A+     + L+       LQ    L       
Sbjct: 179 ------------------------LVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLE 214

Query: 405 NLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNK 457
            ++  Q               + L+ A K +  IE+ + +L          + 
Sbjct: 215 EISNHQG-------------LTPLKLAAK-EGKIEIFRHILQREFSGAAAHHH 253

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 54.8 bits (132), Expect = 2e-08
 Identities = 38/287 (13%), Positives = 72/287 (25%), Gaps = 64/287 (22%)

Query: 234 LFFAIESNSVKIVEAFL-----NSKNFDVSISDGDLN--SLLHKA---CHVGNLQIVQML 283
           LF  +     + +   L     NSK    S         + L KA      G    +  L
Sbjct: 6   LFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPL 65

Query: 284 VKRKFD-----------INAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKR 332
           ++   D              +       +  AI          + L++  + +V+L    
Sbjct: 66  LQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKR--SLQCVKLLVENGA-DVHLRACG 122

Query: 333 PNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQ 392
                         +                                 PL  AA      
Sbjct: 123 RFFQKHQGTCFYFGE--------------------------------LPLSLAACTKQWD 150

Query: 393 SAKYLIQKG---ANVNLTETQKA---FISDARSSDFCFRSALQYACKHKNNIEMVKLLLL 446
              YL++     A++  T++            + +    SAL         ++M   L  
Sbjct: 151 VVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMY-DGLLQMGARLCP 209

Query: 447 HGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKN 493
                   SN     PL +A + G  +I + +          ++  +
Sbjct: 210 TVQLEE-ISNHQGLTPLKLAAKEGKIEIFRHILQREFSGAAAHHHHH 255

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score =  100 bits (250), Expect = 1e-23
 Identities = 50/254 (19%), Positives = 86/254 (33%), Gaps = 50/254 (19%)

Query: 72  VEFLLSTGDHDVNEKL----QDGRTALYMAILQ---GLYKMVTLLIHHG----------- 113
           + FLL+     + ++       G+T L  A+L    G    + +L+              
Sbjct: 25  LSFLLTHKK-RLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFIN 83

Query: 114 ANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDST- 172
           +   D   +G T LH+A     K+ V+ L+ K ADV A+                     
Sbjct: 84  SPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELP 143

Query: 173 -----DTN--EIISMLIENG---ANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADT 222
                 TN   I+  L ENG   A++R +      + LH  V   + +        K   
Sbjct: 144 LSLAACTNQPHIVHYLTENGHKQADLRRQDSR-GNTVLHALVAIADNTRENTKFVTKMYD 202

Query: 223 NLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQM 282
            L++K                    A L       ++ + D  S L  A   G + I Q 
Sbjct: 203 LLLIKC-------------------AKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQH 243

Query: 283 LVKRKFDINAQNRY 296
           +++R+    A + +
Sbjct: 244 IIRREIADAAAHHH 257

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 90.6 bits (225), Expect = 2e-20
 Identities = 48/330 (14%), Positives = 94/330 (28%), Gaps = 96/330 (29%)

Query: 90  GRTALYMAI----LQGLYKMVTLLIHHGANVNDRDEK----GYTPLHLA---CYLGNKNI 138
            R  L+  +      GL  +++ L+ H   + D + +    G T L  A      G  + 
Sbjct: 5   NRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDT 64

Query: 139 VKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFS 198
           +  LL                   ++          N     +   G            +
Sbjct: 65  IPILLD------------------IAEKTGNMREFINSPFRDVYYRG-----------QT 95

Query: 199 PLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVS 258
            LH A+ ++    VELL++  AD +                    +    F   K+    
Sbjct: 96  ALHIAIERRCKHYVELLVEKGADVH-------------------AQARGRFFQPKDEGGY 136

Query: 259 ISDGDLNSLLHKACHVGNLQIVQMLVKRKF---DINAQNRYFLPPMFFAIGMGRKHTHVA 315
              G+L   L  A       IV  L +      D+  Q+      +   + +        
Sbjct: 137 FYFGEL--PLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENT 194

Query: 316 EYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEG 375
           +++            K  +LLL                       +    +    +N +G
Sbjct: 195 KFV-----------TKMYDLLLI------------------KCAKLFPDTNLEALLNNDG 225

Query: 376 DDMITPLLFAAKHCDLQSAKYLIQKGANVN 405
               +PL+ AAK   +   +++I++     
Sbjct: 226 L---SPLMMAAKTGKIGIFQHIIRREIADA 252

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 79.4 bits (196), Expect = 1e-16
 Identities = 32/178 (17%), Positives = 60/178 (33%), Gaps = 32/178 (17%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           T L  A+       VE L+  G  DV+ + +                          +  
Sbjct: 95  TALHIAIERRCKHYVELLVEKG-ADVHAQARGRF-------------------FQPKDEG 134

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSK---KADVRAKCSMMVTP---ILAVSANMSEDS 171
                G  PL LA      +IV +L      +AD+R + S   T    ++A++ N  E++
Sbjct: 135 GYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENT 194

Query: 172 TDTNEIISMLIENGANVREKMPFTD------FSPLHFAVVKKNLSVVELLIKCKADTN 223
               ++  +L+   A +               SPL  A     + + + +I+ +    
Sbjct: 195 KFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADA 252

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 76.7 bits (189), Expect = 1e-15
 Identities = 39/292 (13%), Positives = 63/292 (21%), Gaps = 87/292 (29%)

Query: 380 TPLLFAAKHCDLQS----AKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYA--CK 433
             L                 +L+     +           + R      ++ L  A    
Sbjct: 7   PILFDIVSRGSPDGLEGLLSFLLTHKKRLT--------DEEFREPSTG-KTCLPKALLNL 57

Query: 434 HKNNIEMVKLLLLHGADVNDT----------SNKPKQKPLAVAIQSGDFQIVKELQNYGA 483
                + + +LL       +                Q  L +AI+      V+ L   GA
Sbjct: 58  SAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGA 117

Query: 484 QIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGAC 543
            +  +                                      R  +  +       G  
Sbjct: 118 DVHAQA-----------------------------------RGRFFQPKDEGGYFYFGE- 141

Query: 544 VNVSSERRGSALIYVAWKGYEEIVDLLLDNG---ADVNFKSATGFTALHMACRFHSND-- 598
                      L   A      IV  L +NG   AD+  + + G T LH       N   
Sbjct: 142 ---------LPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRE 192

Query: 599 ------NIVRKLLHHGAYYDMKDG------KTGKTPLKHAEAGKNRDIIDLL 638
                  +   LL   A               G +PL  A       I   +
Sbjct: 193 NTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHI 244

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 72.1 bits (177), Expect = 4e-14
 Identities = 40/248 (16%), Positives = 77/248 (31%), Gaps = 36/248 (14%)

Query: 354 IKRLDQIIKRIIDRTENINAE----GDDMITPLLFAAKHC---DLQSAKYLIQKGANVNL 406
              L+ ++  ++   + +  E         T L  A  +       +   L+        
Sbjct: 18  PDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTG- 76

Query: 407 TETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQK----- 461
              ++   S  R   +  ++AL  A +       V+LL+  GADV+  +     +     
Sbjct: 77  -NMREFINSPFRDVYYRGQTALHIAIER-RCKHYVELLVEKGADVHAQARGRFFQPKDEG 134

Query: 462 --------PLAVAIQSGDFQIVKELQNYG---AQIDKENYLKNKEAARIAHSTTELEERK 510
                   PL++A  +    IV  L   G   A + +++   N          T L    
Sbjct: 135 GYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGN----------TVLHALV 184

Query: 511 KINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLL 570
            I D  + N  F+  +      +  K   D     + +    S L+  A  G   I   +
Sbjct: 185 AIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHI 244

Query: 571 LDNGADVN 578
           +       
Sbjct: 245 IRREIADA 252

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 69.0 bits (169), Expect = 4e-13
 Identities = 42/322 (13%), Positives = 82/322 (25%), Gaps = 108/322 (33%)

Query: 162 AVSANMSEDSTDTNEIISMLIENGANVREKMPFTD---FSPLHFAVV---KKNLSVVELL 215
            VS            ++S L+ +   + ++         + L  A++         + +L
Sbjct: 12  IVSRG---SPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPIL 68

Query: 216 IKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVG 275
           +     T                       +  F+NS   DV        + LH A    
Sbjct: 69  LDIAEKTG---------------------NMREFINSPFRDV---YYRGQTALHIAIERR 104

Query: 276 NLQIVQMLVKRKFDINAQ--NRYFLP------------PMFFAIGMGRKHTHVAEYLLQQ 321
               V++LV++  D++AQ   R+F P            P+  A        H+  YL + 
Sbjct: 105 CKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTN--QPHIVHYLTEN 162

Query: 322 DSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITP 381
                +                                           +  +     T 
Sbjct: 163 GHKQAD-------------------------------------------LRRQDSRGNTV 179

Query: 382 LLFAAKHCD---------LQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYAC 432
           L       D          +    L+ K A +      +A +++         S L  A 
Sbjct: 180 LHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDG------LSPLMMAA 233

Query: 433 KHKNNIEMVKLLLLHGADVNDT 454
           K    I + + ++         
Sbjct: 234 KT-GKIGIFQHIIRREIADAAA 254

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 59.8 bits (145), Expect = 5e-10
 Identities = 34/194 (17%), Positives = 61/194 (31%), Gaps = 33/194 (17%)

Query: 460 QKPLAVAIQSGDFQ----IVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDL 515
           +  L   +  G       ++  L  +  ++  E + +             L      ND 
Sbjct: 6   RPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKAL-LNLSAGRNDT 64

Query: 516 LKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRG-SALIYVAWKGYEEIVDLLLDNG 574
           + + LD  +    N  + +     D          RG +AL     +  +  V+LL++ G
Sbjct: 65  IPILLDIAEKT-GNMREFINSPFRD-------VYYRGQTALHIAIERRCKHYVELLVEKG 116

Query: 575 ADVNFK--------------SATGFTALHMACRFHSNDNIVRKLLHHGAYY---DMKDGK 617
           ADV+ +                 G   L +A   +    IV  L  +G        +D  
Sbjct: 117 ADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPH-IVHYLTENGHKQADLRRQD-S 174

Query: 618 TGKTPLKHAEAGKN 631
            G T L    A  +
Sbjct: 175 RGNTVLHALVAIAD 188

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 93.4 bits (233), Expect = 6e-23
 Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 4/111 (3%)

Query: 63  AVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEK 122
               +       L+  G   +     D    L  A   G    V +L+ +GA+V  +D+ 
Sbjct: 1   GSSHHHHHHSSGLVPRGS-HMGS---DLGKKLLEAARAGQDDEVRILMANGADVAAKDKN 56

Query: 123 GYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTD 173
           G TPLHLA   G+  +VK LL   ADV A+     T       N +ED  +
Sbjct: 57  GSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAE 107

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 83.4 bits (207), Expect = 1e-19
 Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 10/111 (9%)

Query: 105 MVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVS 164
             + L+  G+++          L  A   G  + V+ L++  ADV AK     TP+   +
Sbjct: 9   HSSGLVPRGSHMG---SDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAA 65

Query: 165 ANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELL 215
            N         E++ +L+E GA+V  +  F   +    ++   N  + E+L
Sbjct: 66  RNGHL------EVVKLLLEAGADVXAQDKF-GKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 76.5 bits (189), Expect = 5e-17
 Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 5/102 (4%)

Query: 538 IEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSN 597
           +  G+ +       G  L+  A  G ++ V +L+ NGADV  K   G T LH+A R    
Sbjct: 14  VPRGSHMG---SDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHL 70

Query: 598 DNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLH 639
           + +V+ LL  GA    +D K GKT    +    N D+ ++L 
Sbjct: 71  E-VVKLLLEAGADVXAQD-KFGKTAFDISIDNGNEDLAEILQ 110

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 72.2 bits (178), Expect = 1e-15
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
             L  A    +  EV  L++ G  DV  K ++G T L++A   G  ++V LL+  GA+V 
Sbjct: 26  KKLLEAARAGQDDEVRILMANGA-DVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVX 84

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFL 142
            +D+ G T   ++   GN+++ + L
Sbjct: 85  AQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 68.0 bits (167), Expect = 4e-14
 Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 18/120 (15%)

Query: 360 IIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARS 419
               ++ R  ++ ++       LL AA+       + L+  GA+V            A+ 
Sbjct: 9   HSSGLVPRGSHMGSDLG---KKLLEAARAGQDDEVRILMANGADVA-----------AKD 54

Query: 420 SDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQ 479
            +    + L  A ++  ++E+VKLLL  GADV    +K  +    ++I +G+  + + LQ
Sbjct: 55  KN--GSTPLHLAARN-GHLEVVKLLLEAGADV-XAQDKFGKTAFDISIDNGNEDLAEILQ 110

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 65.7 bits (161), Expect = 3e-13
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 5/80 (6%)

Query: 559 AWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKT 618
           +   +      L+  G+ +    +     L  A R    D+ VR L+ +GA    KD K 
Sbjct: 2   SSHHHHHHSSGLVPRGSHMG---SDLGKKLLEAAR-AGQDDEVRILMANGADVAAKD-KN 56

Query: 619 GKTPLKHAEAGKNRDIIDLL 638
           G TPL  A    + +++ LL
Sbjct: 57  GSTPLHLAARNGHLEVVKLL 76

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 58.4 bits (142), Expect = 9e-11
 Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 18/105 (17%)

Query: 385 AAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLL 444
            + H     +  L+ +G+++          SD           L  A +     + V++L
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMG---------SDL-------GKKLLEAAR-AGQDDEVRIL 43

Query: 445 LLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
           + +GADV          PL +A ++G  ++VK L   GA +  ++
Sbjct: 44  MANGADVAAKDKN-GSTPLHLAARNGHLEVVKLLLEAGADVXAQD 87

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 54.9 bits (133), Expect = 2e-09
 Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 41/143 (28%)

Query: 176 EIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLF 235
              S L+  G+++           L  A        V +L+   AD              
Sbjct: 8   HHSSGLVPRGSHMGSD----LGKKLLEAARAGQDDEVRILMANGADVA------------ 51

Query: 236 FAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNR 295
                                    D + ++ LH A   G+L++V++L++   D+ AQ++
Sbjct: 52  -----------------------AKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDK 88

Query: 296 YFLPPMFFAIGMGRKHTHVAEYL 318
           +       +I  G  +  +AE L
Sbjct: 89  FGKTAFDISIDNG--NEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 45.6 bits (109), Expect = 3e-06
 Identities = 26/143 (18%), Positives = 45/143 (31%), Gaps = 44/143 (30%)

Query: 435 KNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNK 494
            ++      L+  G+ +         K L  A ++G    V+ L   GA +      K+K
Sbjct: 4   HHHHHHSSGLVPRGSHMGSDLG----KKLLEAARAGQDDEVRILMANGADVAA----KDK 55

Query: 495 E-------AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVS 547
                   AAR  H         ++  LL                     +E GA V   
Sbjct: 56  NGSTPLHLAARNGH--------LEVVKLL---------------------LEAGADVXAQ 86

Query: 548 SERRGSALIYVAWKGYEEIVDLL 570
            +   +A       G E++ ++L
Sbjct: 87  DKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 44.9 bits (107), Expect = 6e-06
 Identities = 17/85 (20%), Positives = 31/85 (36%), Gaps = 6/85 (7%)

Query: 237 AIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
               +        L  +   +     DL   L +A   G    V++L+    D+ A+++ 
Sbjct: 1   GSSHHHHHHSS-GLVPRGSHM---GSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKN 56

Query: 297 FLPPMFFAIGMGRKHTHVAEYLLQQ 321
              P+  A   G  H  V + LL+ 
Sbjct: 57  GSTPLHLAARNG--HLEVVKLLLEA 79

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 42.2 bits (100), Expect = 5e-05
 Identities = 18/134 (13%), Positives = 34/134 (25%), Gaps = 51/134 (38%)

Query: 271 ACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPI 330
                +      LV R   + +        +  A   G         L+   +       
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGSDLGK---KLLEAARAG--QDDEVRILMANGA------- 48

Query: 331 KRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCD 390
                                                  ++ A+  +  TPL  AA++  
Sbjct: 49  ---------------------------------------DVAAKDKNGSTPLHLAARNGH 69

Query: 391 LQSAKYLIQKGANV 404
           L+  K L++ GA+V
Sbjct: 70  LEVVKLLLEAGADV 83

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 89.7 bits (224), Expect = 5e-22
 Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 1/90 (1%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           T L  A  +  +  V+ LL  G  DVN K ++GRT L++A   G  ++V LL+  GA+VN
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGA-DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN 62

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKA 147
            +D+ G TPLHLA   G+  +VK LL   A
Sbjct: 63  AKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 89.7 bits (224), Expect = 6e-22
 Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 6/98 (6%)

Query: 89  DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKAD 148
           +GRT L++A   G  ++V LL+  GA+VN +D+ G TPLHLA   G+  +VK LL   AD
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 149 VRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGA 186
           V AK     TP+   + N         E++ +L+E GA
Sbjct: 61  VNAKDKNGRTPLHLAARNGHL------EVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 72.8 bits (180), Expect = 6e-16
 Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 554 ALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDM 613
            L   A  G+ E+V LLL+ GADVN K   G T LH+A R + +  +V+ LL  GA  + 
Sbjct: 5   PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAAR-NGHLEVVKLLLEAGADVNA 63

Query: 614 KDGKTGKTPLKHAEAGKNRDIIDLL 638
           KD K G+TPL  A    + +++ LL
Sbjct: 64  KD-KNGRTPLHLAARNGHLEVVKLL 87

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 70.5 bits (174), Expect = 3e-15
 Identities = 33/77 (42%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 534 VKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACR 593
           VK  +E GA VN   +   + L   A  G+ E+V LLL+ GADVN K   G T LH+A R
Sbjct: 18  VKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAAR 77

Query: 594 FHSNDNIVRKLLHHGAY 610
            + +  +V+ LL  GAY
Sbjct: 78  -NGHLEVVKLLLEAGAY 93

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 65.1 bits (160), Expect = 3e-13
 Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 15/104 (14%)

Query: 380 TPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIE 439
           TPL  AA++  L+  K L++ GA+VN           A+  +   R+ L  A     ++E
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVN-----------AKDKN--GRTPLHLAA-RNGHLE 49

Query: 440 MVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGA 483
           +VKLLL  GADVN       + PL +A ++G  ++VK L   GA
Sbjct: 50  VVKLLLEAGADVNAKDKN-GRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 55.8 bits (136), Expect = 4e-10
 Identities = 36/125 (28%), Positives = 49/125 (39%), Gaps = 41/125 (32%)

Query: 123 GYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLI 182
           G TPLHLA   G+  +VK LL   ADV AK                    D N       
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAK--------------------DKN------- 34

Query: 183 ENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNS 242
                          +PLH A    +L VV+LL++  AD N   K  + P L  A  +  
Sbjct: 35  -------------GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTP-LHLAARNGH 80

Query: 243 VKIVE 247
           +++V+
Sbjct: 81  LEVVK 85

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 52.4 bits (127), Expect = 7e-09
 Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 14/80 (17%)

Query: 370 NINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQ 429
           ++NA+  +  TPL  AA++  L+  K L++ GA+VN           A+  +   R+ L 
Sbjct: 27  DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-----------AKDKN--GRTPLH 73

Query: 430 YACKHKNNIEMVKLLLLHGA 449
            A +   ++E+VKLLL  GA
Sbjct: 74  LAAR-NGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 50.8 bits (123), Expect = 3e-08
 Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 48/135 (35%)

Query: 268 LHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVN 327
           LH A   G+L++V++L++   D+NA+++    P+  A   G  H  V + LL+  +    
Sbjct: 6   LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG--HLEVVKLLLEAGA---- 59

Query: 328 LPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAK 387
                                                     ++NA+  +  TPL  AA+
Sbjct: 60  ------------------------------------------DVNAKDKNGRTPLHLAAR 77

Query: 388 HCDLQSAKYLIQKGA 402
           +  L+  K L++ GA
Sbjct: 78  NGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 49.3 bits (119), Expect = 9e-08
 Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 3/88 (3%)

Query: 234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQ 293
           L  A  +  +++V+  L     DV+  D +  + LH A   G+L++V++L++   D+NA+
Sbjct: 6   LHLAARNGHLEVVK-LLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAK 64

Query: 294 NRYFLPPMFFAIGMGRKHTHVAEYLLQQ 321
           ++    P+  A   G  H  V + LL+ 
Sbjct: 65  DKNGRTPLHLAARNG--HLEVVKLLLEA 90

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 48.1 bits (116), Expect = 2e-07
 Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 2/65 (3%)

Query: 425 RSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQ 484
           R+ L  A +   ++E+VKLLL  GADVN       + PL +A ++G  ++VK L   GA 
Sbjct: 3   RTPLHLAAR-NGHLEVVKLLLEAGADVNAKDKN-GRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 485 IDKEN 489
           ++ ++
Sbjct: 61  VNAKD 65

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 40.4 bits (96), Expect = 1e-04
 Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)

Query: 584 GFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
           G T LH+A R + +  +V+ LL  GA  + KD K G+TPL  A    + +++ LL
Sbjct: 2   GRTPLHLAAR-NGHLEVVKLLLEAGADVNAKD-KNGRTPLHLAARNGHLEVVKLL 54

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 95.5 bits (237), Expect = 1e-21
 Identities = 45/320 (14%), Positives = 99/320 (30%), Gaps = 58/320 (18%)

Query: 7   HRRNSGLVHSVKESSYRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSV-ELTLLCSAVW 65
            +     V +  E   +       ++F E       L    ++ +++            +
Sbjct: 46  MKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSF 105

Query: 66  DNKIREVEFLLSTGDHDVNEKL-QDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGY 124
           D+ ++EV         ++N  + + G T L+        ++V  L+ HG+N    D  G 
Sbjct: 106 DSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGE 165

Query: 125 TPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIEN 184
           + L  A    N                                   + D+    ++L   
Sbjct: 166 SCLVKAVKSVN-----------------------------------NYDSGTFEALLDYL 190

Query: 185 GANVREKMPFTD---FSPLHFAVVKKNLS------------VVELLIKCKADTNLIVKVN 229
              +  +    D    + LH  ++   ++            ++  ++K +          
Sbjct: 191 YPCLILE----DSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNE 246

Query: 230 QEPLLFFAIESNSVKIVEAFLNSKNFDVSIS--DGDLNSLLHKACHVGNLQIVQMLVKRK 287
           +E             I+E           ++  D + ++ L+ A  +GN+ IV  L+   
Sbjct: 247 KESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYG 306

Query: 288 FDINAQNRYFLPPMFFAIGM 307
            D    N+  L P+ F  G+
Sbjct: 307 ADPFIANKSGLRPVDFGAGL 326

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 92.4 bits (229), Expect = 1e-20
 Identities = 60/329 (18%), Positives = 113/329 (34%), Gaps = 36/329 (10%)

Query: 305 IGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRL-----DQ 359
               R    +  +     S  ++ P+K    L   V++  + K+  +  ++RL      +
Sbjct: 18  DDNDRTAGPIITFTHDLTSDFLSSPLKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQE 77

Query: 360 IIKRIIDRTENINAEGDDMITPLLFAA-KHCDLQSAKYLIQKGANVNLTETQKAFISDAR 418
           +   + + + N N+EG          +      +          N+N+            
Sbjct: 78  MPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIP----------- 126

Query: 419 SSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSG---DFQIV 475
             D    + L +      N+E+VK L+ HG++     +   +  L  A++S    D    
Sbjct: 127 -VDEHGNTPLHWLTS-IANLELVKHLVKHGSNRLYG-DNMGESCLVKAVKSVNNYDSGTF 183

Query: 476 KELQNY-GAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEV 534
           + L +Y    +     L++     I H           +   K  LD L          V
Sbjct: 184 EALLDYLYPCLI----LEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGW------IV 233

Query: 535 KKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRF 594
           KK            E + +           E +DL       +N + + G T L++A R 
Sbjct: 234 KKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARL 293

Query: 595 HSNDNIVRKLLHHGAYYDMKDGKTGKTPL 623
             N +IV  LL +GA   + + K+G  P+
Sbjct: 294 G-NISIVDALLDYGADPFIAN-KSGLRPV 320

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 78.1 bits (192), Expect = 8e-16
 Identities = 50/304 (16%), Positives = 104/304 (34%), Gaps = 15/304 (4%)

Query: 168 SEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVK 227
           S+  +   +I+  L     N  E+      + L   +  +   +   L    ++ N    
Sbjct: 36  SDFLSSPLKIMKALPSPVVNDNEQ-KMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGG 94

Query: 228 VNQEPLLFFAIESNSVKIVEAFLNSK-NFDVSISDGDLNSLLHKACHVGNLQIVQMLVKR 286
            + +     + +S   ++ +AF N++ N ++ + D   N+ LH    + NL++V+ LVK 
Sbjct: 95  SSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPV-DEHGNTPLHWLTSIANLELVKHLVKH 153

Query: 287 KFDINAQNRYFLPPMFFAIGMGRKHTH-VAEYLLQQDSINVNLPIKRPNLLLDTVMSLKD 345
             +    +      +  A+     +     E LL      + L       +L  ++    
Sbjct: 154 GSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSG 213

Query: 346 PKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVN 405
               S      LD ++  I+ +       G +               S    +     + 
Sbjct: 214 MTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWII- 272

Query: 406 LTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAV 465
                   + +A+  D    + L  A +   NI +V  LL +GAD    +NK   +P+  
Sbjct: 273 -----ANML-NAQ--DSNGDTCLNIAAR-LGNISIVDALLDYGADPF-IANKSGLRPVDF 322

Query: 466 AIQS 469
               
Sbjct: 323 GAGL 326

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 70.8 bits (173), Expect = 2e-13
 Identities = 25/206 (12%), Positives = 64/206 (31%), Gaps = 28/206 (13%)

Query: 445 LLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTT 504
           ++        ++  ++  L   +Q   F  ++E+             +   + +     +
Sbjct: 45  IMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVS 104

Query: 505 ELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRG-SALIYVAWKGY 563
                +++ND                             +N+  +  G + L ++     
Sbjct: 105 FDSLLQEVNDAF---------------------PNTQLNLNIPVDEHGNTPLHWLTSIAN 143

Query: 564 EEIVDLLLDNGADVNFKSATGFTALHMACRFHSN---DNIVRKLLHHGAYYDMKDGKTGK 620
            E+V  L+ +G++  +    G + L  A +  +N         L +      ++D    +
Sbjct: 144 LELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILED-SMNR 202

Query: 621 TPLKHA--EAGKNRDIIDLLHLIDNL 644
           T L H    +G         + +D L
Sbjct: 203 TILHHIIITSGMTGCSAAAKYYLDIL 228

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 42.7 bits (100), Expect = 3e-04
 Identities = 14/120 (11%), Positives = 38/120 (31%)

Query: 519 NLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVN 578
             D   +  S+    +K         N    +  + L  + +   +E+   L ++ ++ N
Sbjct: 31  THDLTSDFLSSPLKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRN 90

Query: 579 FKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
            +  +                +     +     ++   + G TPL    +  N +++  L
Sbjct: 91  SEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHL 150

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 94.2 bits (234), Expect = 7e-21
 Identities = 36/403 (8%), Positives = 91/403 (22%), Gaps = 78/403 (19%)

Query: 211 VVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHK 270
            + + +    +        ++      +           L S      I    +  +   
Sbjct: 49  AIHIFLPGTKN-------MEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAI 101

Query: 271 ACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPI 330
                 L  + +L+     +             A   G  H HV   L +     +    
Sbjct: 102 TGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENG--HLHVLNRLCELAPTEIM--- 156

Query: 331 KRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCD 390
                                                   I AE          AA++  
Sbjct: 157 --------------------------------------AMIQAENY---HAFRLAAENGH 175

Query: 391 LQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGAD 450
           L     L +                  ++ ++    A ++A   + +  ++  LL     
Sbjct: 176 LHVLNRLCELAPTEATA--------MIQAENYY---AFRWAAVGRGHHNVINFLLDCPVM 224

Query: 451 VNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERK 510
           +                + G+  +   +  +  ++ + +                  E  
Sbjct: 225 LAYAEIH--------EFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECL 276

Query: 511 KINDLLKLNLD--FLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVD 568
           +   +L+  +       +   ++      I+  A            L      G +    
Sbjct: 277 QGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACA 336

Query: 569 LLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYY 611
           LLL   + +    A  +   ++       D +    L H  ++
Sbjct: 337 LLLSIPSVLALTKANNY---YINETGGRLD-LRAVALEHHHHH 375

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 88.1 bits (218), Expect = 7e-19
 Identities = 43/391 (10%), Positives = 97/391 (24%), Gaps = 92/391 (23%)

Query: 29  SEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQ 88
           S +  S ++A   FL G  N    +     LLC           +        D ++K  
Sbjct: 40  SLMTLSYKEAIHIFLPGTKNMEQVRQ----LLCLYYAHYNRNAKQLW-----SDAHKKGI 90

Query: 89  DGRTALYMAILQG---LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSK 145
                 ++A + G       + LL+     V     + Y    LA   G+ +++  L   
Sbjct: 91  KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCEL 150

Query: 146 KADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVV 205
                                                   A ++ +    ++     A  
Sbjct: 151 APTE----------------------------------IMAMIQAE----NYHAFRLAAE 172

Query: 206 KKNLSVVELLIKCKADTNL--IVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGD 263
             +L V+  L +         I   N     + A+      ++   L+            
Sbjct: 173 NGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLD--------CPVM 224

Query: 264 LNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDS 323
           L          G   +   + +    +   +                         +  +
Sbjct: 225 LAYAEIHEFEYGEKYVNPFIARHVNRLKEMH----------------------DAFKLSN 262

Query: 324 INVNLPI------KRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDD 377
            +    +       +   +L  ++   D  ++   +       IK +            D
Sbjct: 263 PDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAP----TATIPGD 318

Query: 378 MITPLLFAAKHCDLQSAKYLIQKGANVNLTE 408
               L  A +  +  +   L+   + + LT+
Sbjct: 319 ANELLRLALRLGNQGACALLLSIPSVLALTK 349

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 58.4 bits (141), Expect = 3e-09
 Identities = 18/114 (15%), Positives = 35/114 (30%), Gaps = 19/114 (16%)

Query: 84  NEKLQDGRTALYMAILQGLYKMVTLL--------IHHGANVNDRDEKGYTPLHLACYLGN 135
             +   G   L   I +    ++  +        I   A            L LA  LGN
Sbjct: 272 KSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGN 331

Query: 136 KNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTN-EIISMLIENGANV 188
           +     LLS  + +           L  + N   + T    ++ ++ +E+  + 
Sbjct: 332 QGACALLLSIPSVL----------ALTKANNYYINETGGRLDLRAVALEHHHHH 375

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 54.6 bits (131), Expect = 6e-08
 Identities = 19/197 (9%), Positives = 50/197 (25%), Gaps = 22/197 (11%)

Query: 72  VEFLLSTG--DHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHL 129
           +  L      +     + ++     + A+ +G + ++  L+     +   +   +     
Sbjct: 179 LNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEK 238

Query: 130 ACYLGNKNIVKFLLSKKADVRAKCSMMVTPIL----------AVSANMSEDSTDTNEIIS 179
                    V  L       +      V  ++           +   +  +     + I 
Sbjct: 239 YVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIR 298

Query: 180 MLI-----ENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLL 234
            L+     +  A     +P      L  A+   N     LL+   +   L    N     
Sbjct: 299 FLLSIPGIKALAPT-ATIPGDANELLRLALRLGNQGACALLLSIPSVLALTKANN----Y 353

Query: 235 FFAIESNSVKIVEAFLN 251
           +       + +    L 
Sbjct: 354 YINETGGRLDLRAVALE 370

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 53.0 bits (127), Expect = 2e-07
 Identities = 18/126 (14%), Positives = 36/126 (28%), Gaps = 14/126 (11%)

Query: 513 NDLLKLNLDFLKNVRSNK----------YDEVKKNIEDGACVNVSSERRGSALIYVAWKG 562
            + + + L   KN+   +              K+   D     + SE             
Sbjct: 47  KEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSS 106

Query: 563 YEEIVDLLLDNGADVNFKSATGFTALHMACRF-HSNDNIVRKLLHHGAYYDMKDGKT-GK 620
             + + LLL +   V    A  + A  +A    H   +++ +L        M   +    
Sbjct: 107 ALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHL--HVLNRLCELAPTEIMAMIQAENY 164

Query: 621 TPLKHA 626
              + A
Sbjct: 165 HAFRLA 170

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 49.9 bits (119), Expect = 1e-06
 Identities = 21/198 (10%), Positives = 54/198 (27%), Gaps = 29/198 (14%)

Query: 435 KNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNK 494
            +  E + + L    ++         + L     +   +  K+L +   +   ++ +   
Sbjct: 44  LSYKEAIHIFLPGTKNMEQV------RQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICF 97

Query: 495 EAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDE-------------VKKNIEDG 541
            AA              +  LL  +      V   +  +             + +  E  
Sbjct: 98  VAAITGC----SSALDTLCLLLTSDEI--VKVIQAENYQAFRLAAENGHLHVLNRLCELA 151

Query: 542 ACVNVSSERRG--SALIYVAWKGYEEIVDLLLDNGADVNFK--SATGFTALHMACRFHSN 597
               ++  +     A    A  G+  +++ L +           A  + A   A     +
Sbjct: 152 PTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGH 211

Query: 598 DNIVRKLLHHGAYYDMKD 615
            N++  LL         +
Sbjct: 212 HNVINFLLDCPVMLAYAE 229

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 45.7 bits (108), Expect = 3e-05
 Identities = 15/100 (15%), Positives = 29/100 (29%), Gaps = 10/100 (10%)

Query: 57  LTLLCSAVWDNKIREVE---FLLSTGD----HDVNEKLQDGRTALYMAILQGLYKMVTLL 109
             +L + +  N    ++   FLLS               D    L +A+  G      LL
Sbjct: 279 FYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALL 338

Query: 110 IHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADV 149
           +   + +       Y   ++    G  ++    L      
Sbjct: 339 LSIPSVLALTKANNY---YINETGGRLDLRAVALEHHHHH 375

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 77.6 bits (190), Expect = 9e-15
 Identities = 80/598 (13%), Positives = 186/598 (31%), Gaps = 162/598 (27%)

Query: 166 NMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLI 225
              E      +I+S+  +      +     D   +  +++ K    ++ +I  K      
Sbjct: 10  ETGEHQYQYKDILSVFEDA---FVDNFDCKDVQDMPKSILSK--EEIDHIIMSKDA---- 60

Query: 226 VKVNQEPLLFFAIESNSVKIVEAFLNS---KNFD-------VSISDGDLNSLLHKACHV- 274
             V+    LF+ + S   ++V+ F+      N+               + + ++      
Sbjct: 61  --VSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDR 118

Query: 275 ---GNLQIVQMLVKRKFDINAQNR--YFLPPMFFAI--GMG--RKHTHVAEYLLQQDSIN 325
               N    +  V R        +    L P    +  G+    K     + +     + 
Sbjct: 119 LYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALD-VCLSYKVQ 177

Query: 326 VNLP----------IKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEG 375
             +              P  +L+          M Q  + ++D       D + NI    
Sbjct: 178 CKMDFKIFWLNLKNCNSPETVLE----------MLQKLLYQIDPNWTSRSDHSSNIKLRI 227

Query: 376 DDMITPL--LFAAK---HC-----DLQSAKYLIQKGANVN---LTETQKAFISDARSSDF 422
             +   L  L  +K   +C     ++Q+AK       N++   L  T+   ++D  S+  
Sbjct: 228 HSIQAELRRLLKSKPYENCLLVLLNVQNAKAW--NAFNLSCKILLTTRFKQVTDFLSAAT 285

Query: 423 CFRSALQYACKHKNNIEMVKLLLLH-GADVNDTSNKPKQK----PLAVAIQSGDFQIVKE 477
               +L +        E+  LLL +      D    P++     P  ++I      I + 
Sbjct: 286 TTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL---PREVLTTNPRRLSI------IAES 336

Query: 478 LQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKN 537
           +++  A  D  N+                    K+  +++ +L+ L+        E +K 
Sbjct: 337 IRDGLATWD--NWKHV--------------NCDKLTTIIESSLNVLEP------AEYRKM 374

Query: 538 IEDGAC----VNVSSERRGSALIYVAWKGY-----EEIVDLLLDNG-ADVNFKSAT-GFT 586
            +  +      ++ +      L+ + W          +V+ L      +   K +T    
Sbjct: 375 FDRLSVFPPSAHIPTI-----LLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIP 429

Query: 587 ALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHL-IDNLF 645
           ++++  +    +      LH             ++ + H    K  D  DL+   +D  F
Sbjct: 430 SIYLELKVKLEN---EYALH-------------RSIVDHYNIPKTFDSDDLIPPYLDQYF 473

Query: 646 ASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYSFLER 703
                 Y    +H    + + +    + +F ++     +           +++ FLE+
Sbjct: 474 ------YSHIGHH----LKNIEHPERMTLFRMV-----F-----------LDFRFLEQ 505

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 64.5 bits (156), Expect = 1e-10
 Identities = 88/696 (12%), Positives = 196/696 (28%), Gaps = 217/696 (31%)

Query: 22  YRHHHL---FSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLST 78
           + HHH+     E  +  +D    F    +++   K V+  +  S +      E++ ++ +
Sbjct: 2   HHHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQ-DMPKSIL---SKEEIDHIIMS 57

Query: 79  GDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGAN-----VNDRDEKGY----TPLHL 129
            D                    G  ++   L+          V +     Y    +P+  
Sbjct: 58  KDAV-----------------SGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKT 100

Query: 130 ACYLGNKNIVKFLLSKKA---DVRAKCSMMVT---PILAVSANMSEDSTDTNEII----- 178
                +     ++  +     D +      V+   P L +   + E     N +I     
Sbjct: 101 EQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLG 160

Query: 179 ---SMLIENGAN---VREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEP 232
              + +  +      V+ KM F  F  L+                C +   ++  + +  
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKIFW-LNLK-------------NCNSPETVLEMLQK-- 204

Query: 233 LLFFAIESNSVKIVEAFLNSKNFDVSISDGD--LNSLL----HKAC-----HVGNLQIV- 280
            L + I+ N     +   +S N  + I      L  LL    ++ C     +V N +   
Sbjct: 205 -LLYQIDPNWTSRSD---HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWN 260

Query: 281 ------QMLV----KRKFD-INAQNRYFLPPMFFAIGMGRKHTH--VAEYLLQQDSINVN 327
                 ++L+    K+  D ++A     +     ++ +        + +YL  +     +
Sbjct: 261 AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ---D 317

Query: 328 LP--IKRPNLLLDTVM--SLKDPKVMS----QTQIKRLDQIIKRIIDRTENINAEGDDMI 379
           LP  +   N    +++  S++D              +L  II+  ++           ++
Sbjct: 318 LPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN-----------VL 366

Query: 380 TPLLFAAKHCDLQSAKYLIQKGANV----------NLTETQKAFISDARSSDFCFRSALQ 429
            P  +      L     +    A++          ++ ++    + +         S ++
Sbjct: 367 EPAEYRKMFDRL----SVFPPSAHIPTILLSLIWFDVIKSDVMVVVN----KLHKYSLVE 418

Query: 430 YACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPL-AVAIQSGDFQIVKELQNYGAQIDKE 488
              K          + +    +        +  L    +    + I K   +        
Sbjct: 419 ---KQPKE----STISIPSIYLELKVKLENEYALHRSIVDH--YNIPKTFDSDDLIPPYL 469

Query: 489 -NY--------LKNKE------------------AARIAHSTTELEERKKINDLLKLNLD 521
             Y        LKN E                    +I H +T       I + L     
Sbjct: 470 DQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTL---QQ 526

Query: 522 FLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKS 581
                    Y   K  I D       ++ +           YE +V+ +LD         
Sbjct: 527 L------KFY---KPYICD-------NDPK-----------YERLVNAILD--------- 550

Query: 582 ATGFTALHMACRFHSND-NIVRKLLHH--GAYYDMK 614
              F          S   +++R  L     A ++  
Sbjct: 551 ---FLPKIEENLICSKYTDLLRIALMAEDEAIFEEA 583

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 73.3 bits (179), Expect = 4e-14
 Identities = 32/146 (21%), Positives = 56/146 (38%), Gaps = 7/146 (4%)

Query: 59  LLCSAVWDNKIREVEFLLSTG-DHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           L  ++     +  +   L+ G D +     QD  T L  A           L+ +GANVN
Sbjct: 203 LFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVN 262

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPI-LAVSANMSEDSTDTNE 176
             D  G  PLH A  LG+  +    L + AD+ A+ S    P+ +A+       + D   
Sbjct: 263 QADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETA----NADIVT 318

Query: 177 IISMLIENGANVREKMPFTD-FSPLH 201
           ++ +     A   +     + +  + 
Sbjct: 319 LLRLAKMREAEAAQGQAGDETYLDIF 344

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 67.5 bits (164), Expect = 4e-12
 Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 4/102 (3%)

Query: 541 GACVN--VSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSND 598
           GA VN     +   + LI           + LL NGA+VN   + G   LH A     + 
Sbjct: 223 GADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATI-LGHT 281

Query: 599 NIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHL 640
            +    L  GA    +D   G+ PL  A    N DI+ LL L
Sbjct: 282 GLACLFLKRGADLGARD-SEGRDPLTIAMETANADIVTLLRL 322

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 55.2 bits (132), Expect = 4e-08
 Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 15/109 (13%)

Query: 370 NINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQ 429
           N    G D  TPL+ A     L + ++L+Q GANVN  ++               R  L 
Sbjct: 227 NWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAG-------------RGPLH 273

Query: 430 YACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKEL 478
           +A     +  +  L L  GAD+    +   + PL +A+++ +  IV  L
Sbjct: 274 HATIL-GHTGLACLFLKRGADL-GARDSEGRDPLTIAMETANADIVTLL 320

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 45.9 bits (108), Expect = 3e-05
 Identities = 27/203 (13%), Positives = 63/203 (31%), Gaps = 17/203 (8%)

Query: 345 DPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANV 404
            P V  +  I+     ++   +                  +     L +    +  GA+V
Sbjct: 167 QPPVPPKPSIRPRPGSLRSKPEPPSEDLGSLHPGALLFRASGHPPSLPTMADALAHGADV 226

Query: 405 NLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLA 464
           N                    + L  A    N++   + LL +GA+VN   +   + PL 
Sbjct: 227 NWVN-----------GGQDNATPLIQATAA-NSLLACEFLLQNGANVNQA-DSAGRGPLH 273

Query: 465 VAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAH--STTELEERKKINDLLKLNLDF 522
            A   G   +       GA +   +  + ++   IA   +  ++    ++  + +     
Sbjct: 274 HATILGHTGLACLFLKRGADLGARDS-EGRDPLTIAMETANADIVTLLRLAKMREAEAAQ 332

Query: 523 LKNVRSNKYDEVKKNIEDGACVN 545
            +      Y ++ ++    A  +
Sbjct: 333 GQAG-DETYLDIFRDFSLMASDD 354

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 43.2 bits (101), Expect = 2e-04
 Identities = 35/186 (18%), Positives = 58/186 (31%), Gaps = 43/186 (23%)

Query: 87  LQDGRTALYMAILQGLYKMVTLLIHHGANVN--DRDEKGYTPLHLACYLGNKNIVKFLLS 144
           L  G      +        +   + HGA+VN  +  +   TPL  A    +    +FLL 
Sbjct: 197 LHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLL- 255

Query: 145 KKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAV 204
                                                 +NGANV +        PLH A 
Sbjct: 256 --------------------------------------QNGANVNQADSAG-RGPLHHAT 276

Query: 205 VKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDL 264
           +  +  +  L +K  AD        ++P L  A+E+ +  IV     +K  +   + G  
Sbjct: 277 ILGHTGLACLFLKRGADLGARDSEGRDP-LTIAMETANADIVTLLRLAKMREAEAAQGQA 335

Query: 265 NSLLHK 270
               + 
Sbjct: 336 GDETYL 341

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 72.0 bits (176), Expect = 6e-14
 Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 1/97 (1%)

Query: 57  LTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANV 116
           L L   +V    +  V+FL+     +++++   G TAL+   L    + + LL+   A++
Sbjct: 173 LHLAVRSVDRTSLHIVDFLVQNSG-NLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASI 231

Query: 117 NDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKC 153
              +E G TPL +A  L +++  + L    +      
Sbjct: 232 EIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSH 268

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 70.0 bits (171), Expect = 2e-13
 Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 11/122 (9%)

Query: 61  CSAVWDNKIREVEFLLSTGDHDVNEKL------QDGRTALYMAILQG---LYKMVTLLIH 111
           C AV    I  +    + G  D+ EK+      +   TAL++A+         +V  L+ 
Sbjct: 135 CEAVKTRDIFGLLQAYADG-VDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQ 193

Query: 112 HGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPI-LAVSANMSED 170
           +  N++ +  KG T LH  C   N   +K LL  KA +        TP+ +A        
Sbjct: 194 NSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHC 253

Query: 171 ST 172
             
Sbjct: 254 EE 255

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 64.6 bits (157), Expect = 1e-11
 Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 2/83 (2%)

Query: 558 VAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGK 617
              +    IVD L+ N  +++ ++  G TALH  C    N   ++ LL   A  ++ +  
Sbjct: 179 SVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCL-TDNAECLKLLLRGKASIEIANES 237

Query: 618 TGKTPLKHAEAGKNRDIIDLLHL 640
            G+TPL  A+  K+    +LL  
Sbjct: 238 -GETPLDIAKRLKHEHCEELLTQ 259

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 57.3 bits (138), Expect = 5e-09
 Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 18/109 (16%)

Query: 376 DDMITPLLFAAKHCD---LQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYAC 432
           +   T L  A +  D   L    +L+Q   N++    +               +AL Y C
Sbjct: 167 EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKG-------------STALHYCC 213

Query: 433 KHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNY 481
              +N E +KLLL   A +   +N+  + PL +A +       + L   
Sbjct: 214 LT-DNAECLKLLLRGKASIE-IANESGETPLDIAKRLKHEHCEELLTQA 260

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 48.8 bits (116), Expect = 2e-06
 Identities = 28/183 (15%), Positives = 56/183 (30%), Gaps = 51/183 (27%)

Query: 93  ALYMAILQGLYKMVTLLIHHGANVN------DRDEKGYTPLHLACYLGNKNIVKFLLSKK 146
           +L  A+       +      G ++       +  E   T LHLA    ++  +       
Sbjct: 133 SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSL------- 185

Query: 147 ADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVK 206
                                         I+  L++N  N+ ++      + LH+  + 
Sbjct: 186 -----------------------------HIVDFLVQNSGNLDKQTGKGS-TALHYCCLT 215

Query: 207 KNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNS 266
            N   ++LL++ KA   +  +  + PL   A         E    + +       G  NS
Sbjct: 216 DNAECLKLLLRGKASIEIANESGETPLD-IAKRLKHEHCEELLTQALS-------GRFNS 267

Query: 267 LLH 269
            +H
Sbjct: 268 HVH 270

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 46.1 bits (109), Expect = 2e-05
 Identities = 13/61 (21%), Positives = 26/61 (42%)

Query: 538 IEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSN 597
           +++   ++  + +  +AL Y       E + LLL   A +   + +G T L +A R    
Sbjct: 192 VQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHE 251

Query: 598 D 598
            
Sbjct: 252 H 252

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 41.9 bits (98), Expect = 4e-04
 Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 11/126 (8%)

Query: 203 AVVKKNLSVVELLIKCKADTNLIVKV-----NQEPLLFFAIES---NSVKIVEAFLNSKN 254
           AV  +++  +        D    + +       E  L  A+ S    S+ IV+ FL   +
Sbjct: 137 AVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVD-FLVQNS 195

Query: 255 FDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHV 314
            ++    G  ++ LH  C   N + +++L++ K  I   N     P+  A  +   H H 
Sbjct: 196 GNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLK--HEHC 253

Query: 315 AEYLLQ 320
            E L Q
Sbjct: 254 EELLTQ 259

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 71.6 bits (175), Expect = 1e-13
 Identities = 23/122 (18%), Positives = 45/122 (36%), Gaps = 11/122 (9%)

Query: 61  CSAVWDNKIREVEFLLSTGDHDVNEKL------QDGRTALYMAILQG---LYKMVTLLIH 111
            +A+ +  +  V    + G  D  + L            L++A+         +V  +I 
Sbjct: 156 WTAICNRDLLSVLEAFANGQ-DFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQ 214

Query: 112 HGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPI-LAVSANMSED 170
           +G +++ +   G T LH A      + +K LL  +A V        T + +A   +  E 
Sbjct: 215 NGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKEC 274

Query: 171 ST 172
             
Sbjct: 275 EE 276

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 69.6 bits (170), Expect = 4e-13
 Identities = 26/143 (18%), Positives = 52/143 (36%), Gaps = 11/143 (7%)

Query: 507 EERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGS---------ALIY 557
            E +               + +     V +   +G           +           + 
Sbjct: 140 VEHRFARRCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVK 199

Query: 558 VAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGK 617
           VA +    +VD ++ NG  ++ K+A G TALH A   ++  + ++ LL   A     + +
Sbjct: 200 VANQASLPLVDFIIQNGGHLDAKAADGNTALHYAAL-YNQPDCLKLLLKGRALVGTVN-E 257

Query: 618 TGKTPLKHAEAGKNRDIIDLLHL 640
            G+T L  A    +++  +LL  
Sbjct: 258 AGETALDIARKKHHKECEELLEQ 280

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 68.1 bits (166), Expect = 1e-12
 Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 1/97 (1%)

Query: 57  LTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANV 116
           L L         +  V+F++  G   ++ K  DG TAL+ A L      + LL+   A V
Sbjct: 194 LHLAVKVANQASLPLVDFIIQNGG-HLDAKAADGNTALHYAALYNQPDCLKLLLKGRALV 252

Query: 117 NDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKC 153
              +E G T L +A    +K   + L   +A   A  
Sbjct: 253 GTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFP 289

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 53.8 bits (129), Expect = 6e-08
 Identities = 25/134 (18%), Positives = 46/134 (34%), Gaps = 20/134 (14%)

Query: 365 IDRTENINAEGDDMITPLLFAAKHCD---LQSAKYLIQKGANVNLTETQKAFISDARSSD 421
             +              L  A K  +   L    ++IQ G +++                
Sbjct: 177 FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADG---------- 226

Query: 422 FCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNY 481
               +AL YA  + N  + +KLLL   A V  T N+  +  L +A +    +  + L+  
Sbjct: 227 ---NTALHYAALY-NQPDCLKLLLKGRALVG-TVNEAGETALDIARKKHHKECEELLEQ- 280

Query: 482 GAQIDKENYLKNKE 495
            AQ     +  + +
Sbjct: 281 -AQAGTFAFPLHVD 293

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 51.9 bits (124), Expect = 3e-07
 Identities = 28/191 (14%), Positives = 57/191 (29%), Gaps = 51/191 (26%)

Query: 85  EKLQDGRTALYMAILQGLYKMVTLLIHHGANVN------DRDEKGYTPLHLACYLGNKNI 138
            +       L+ AI       V     +G +        D        LHLA  + N+  
Sbjct: 146 RRCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQAS 205

Query: 139 VKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFS 198
           +                                     ++  +I+NG ++  K    + +
Sbjct: 206 L------------------------------------PLVDFIIQNGGHLDAKAADGN-T 228

Query: 199 PLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVS 258
            LH+A +      ++LL+K +A    + +  +  L   A + +  +  E    ++     
Sbjct: 229 ALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALD-IARKKHHKECEELLEQAQA---- 283

Query: 259 ISDGDLNSLLH 269
              G     LH
Sbjct: 284 ---GTFAFPLH 291

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 72.2 bits (177), Expect = 2e-13
 Identities = 21/102 (20%), Positives = 40/102 (39%), Gaps = 10/102 (9%)

Query: 60  LCSAVWDNKIREVEFLLSTGDHDVNEKL------QDGRTALYMAILQGLYK---MVTLLI 110
           L +A+ +  +  V    + G  D  + L            L++A+         +V  +I
Sbjct: 136 LWTAICNRDLLSVLEAFANGQ-DFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFII 194

Query: 111 HHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAK 152
            +G +++ +   G T LH A      + +K LL  +A V   
Sbjct: 195 QNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTV 236

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 58.0 bits (140), Expect = 5e-09
 Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 9/154 (5%)

Query: 490 YLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSE 549
           Y++++ A R       L       DLL +   F       +          G       E
Sbjct: 120 YVEHRFARRCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQ-------PLPGPDAQAPEE 172

Query: 550 RRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGA 609
                 + VA +    +VD ++ NG  ++ K+A G TALH A   ++  + ++ LL   A
Sbjct: 173 LVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAAL-YNQPDCLKLLLKGRA 231

Query: 610 YYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDN 643
                + + G+T L  A    +++  +LL     
Sbjct: 232 LVGTVN-EAGETALDIARKKHHKECEELLEQAQA 264

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 46.0 bits (109), Expect = 4e-05
 Identities = 23/154 (14%), Positives = 47/154 (30%), Gaps = 43/154 (27%)

Query: 86  KLQDGRTALYMAILQGLYKMVTLLIHHGANVN------DRDEKGYTPLHLACYLGNKNIV 139
           +       L+ AI       V     +G +        D        LHLA  + N+  +
Sbjct: 128 RCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASL 187

Query: 140 KFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSP 199
                                                ++  +I+NG ++  K    + + 
Sbjct: 188 ------------------------------------PLVDFIIQNGGHLDAKAADGN-TA 210

Query: 200 LHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPL 233
           LH+A +      ++LL+K +A    + +  +  L
Sbjct: 211 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETAL 244

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	710
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	100.0
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	100.0
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	100.0
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	100.0
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	100.0
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	100.0
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	100.0
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	100.0
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	100.0
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	100.0
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	100.0
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	100.0
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	100.0
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	100.0
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	100.0
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	100.0
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	100.0
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	100.0
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	100.0
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	100.0
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	100.0
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	100.0
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	100.0
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	100.0
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	100.0
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	100.0
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	100.0
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	100.0
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	100.0
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	100.0
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	100.0
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	100.0
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	100.0
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	100.0
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	100.0
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	100.0
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	100.0
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	100.0
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	100.0
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	100.0
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	100.0
2rfa_A	232	Transient receptor potential cation channel subfa	100.0
4gpm_A	169	Engineered protein OR264; de novo protein, structu	100.0
2rfa_A	232	Transient receptor potential cation channel subfa	100.0
4gpm_A	169	Engineered protein OR264; de novo protein, structu	100.0
3hra_A	201	Ankyrin repeat family protein; structural protein;	100.0
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	100.0
2etb_A	256	Transient receptor potential cation channel subfam	100.0
2etb_A	256	Transient receptor potential cation channel subfam	100.0
2pnn_A	273	Transient receptor potential cation channel subfa	100.0
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.98
2pnn_A	273	Transient receptor potential cation channel subfa	99.97
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.97
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.97
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.97
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.97
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.97
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.96
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.96
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.96
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.96
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.96
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.96
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.96
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.96
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.96
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.96
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.96
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.96
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.96
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.96
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.96
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.96
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.96
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.96
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.96
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.96
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.95
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.95
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.95
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.94
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.94
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.93
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.93
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.93
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.93
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.92
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.92
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.92
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.92
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.92
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.91
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.91
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.91
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.91
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.9
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.9
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.9
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.89
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.89
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.88
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.88
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.87
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.86
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.86
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.86
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.85
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.85
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.85
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.84
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.84
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.84
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.76
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.74

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=7.4e-63  Score=511.44  Aligned_cols=397  Identities=28%  Similarity=0.367  Sum_probs=317.2

Q ss_pred             cCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCC
Q psy15068         78 TGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMV  157 (710)
Q Consensus        78 ~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~  157 (710)
                      .|+ +++..+..|+||||+|+..|+.++|++|++.|++++..+..|.||||+|+..|+.++|++|+++|++++.++..|.
T Consensus         3 ~g~-~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~   81 (437)
T 1n11_A            3 PGI-SGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQ   81 (437)
T ss_dssp             -------------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSC
T ss_pred             CCC-CccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCC
Confidence            455 7888899999999999999999999999999999999999999999999999999999999999999888887777


Q ss_pred             chhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHH
Q psy15068        158 TPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFA  237 (710)
Q Consensus       158 ~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A  237 (710)
                      |||++|+..|      +.+++++|+++|++++..+. .|.|||+.|+..|+.+++++|++.+++.               
T Consensus        82 t~L~~A~~~g------~~~~v~~Ll~~ga~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~~~~~---------------  139 (437)
T 1n11_A           82 TPLHCAARIG------HTNMVKLLLENNANPNLATT-AGHTPLHIAAREGHVETVLALLEKEASQ---------------  139 (437)
T ss_dssp             CHHHHHHHHT------CHHHHHHHHHHTCCTTCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCCS---------------
T ss_pred             CHHHHHHHCC------CHHHHHHHHhCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHhCCCCC---------------
Confidence            7777777777      77777777777777666665 6666776666666666666666655543               


Q ss_pred             HhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHH
Q psy15068        238 IESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEY  317 (710)
Q Consensus       238 ~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~  317 (710)
                                          +..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..++.       
T Consensus       140 --------------------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-------  192 (437)
T 1n11_A          140 --------------------ACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNL-------  192 (437)
T ss_dssp             --------------------CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCH-------
T ss_pred             --------------------cCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCH-------
Confidence                                34455667788888888888888888888888777777777888887777766       


Q ss_pred             HhhcccccCCCCCCCCcchhhhhhccCCcccccHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q psy15068        318 LLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYL  397 (710)
Q Consensus       318 Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~L  397 (710)
                                                               +++++|+++|.+++..+..|.||||+|+..|+.+++++|
T Consensus       193 -----------------------------------------~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~L  231 (437)
T 1n11_A          193 -----------------------------------------DIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSL  231 (437)
T ss_dssp             -----------------------------------------HHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred             -----------------------------------------HHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence                                                     444445556667777777888888888888888888888


Q ss_pred             HHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCCHhHHHH
Q psy15068        398 IQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKE  477 (710)
Q Consensus       398 l~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~  477 (710)
                      ++.|++++..+..             |.||||+|+.. ++.+++++|+++|++++.. +..|.||||+|+..|+.+++++
T Consensus       232 l~~g~~~~~~~~~-------------g~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~-~~~g~t~L~~A~~~~~~~~~~~  296 (437)
T 1n11_A          232 LQYGGSANAESVQ-------------GVTPLHLAAQE-GHAEMVALLLSKQANGNLG-NKSGLTPLHLVAQEGHVPVADV  296 (437)
T ss_dssp             HHTTCCTTCCCTT-------------CCCHHHHHHHT-TCHHHHHHHHTTTCCTTCC-CTTCCCHHHHHHHHTCHHHHHH
T ss_pred             HHcCCCCCCCCCC-------------CCCHHHHHHHC-CCHHHHHHHHhcCCCCCCC-CCCCCCHHHHHHHcCCHHHHHH
Confidence            8888888877666             88899988888 8888999988888888877 8888888888888888888888


Q ss_pred             HHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHH
Q psy15068        478 LQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIY  557 (710)
Q Consensus       478 Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~  557 (710)
                      |+++|+++                                                           +.++..|.||||+
T Consensus       297 Ll~~g~~~-----------------------------------------------------------~~~~~~g~t~L~~  317 (437)
T 1n11_A          297 LIKHGVMV-----------------------------------------------------------DATTRMGYTPLHV  317 (437)
T ss_dssp             HHHHTCCT-----------------------------------------------------------TCCCSSCCCHHHH
T ss_pred             HHhCCccC-----------------------------------------------------------CCCCCCCCCHHHH
Confidence            87776654                                                           4455778899999


Q ss_pred             HHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHH
Q psy15068        558 VAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDL  637 (710)
Q Consensus       558 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~  637 (710)
                      |+..|+.+++++|+++|++++.+|..|+||||+|+.. |+.++|++|+++|++++.++ .+|.|||++|...|+.+++++
T Consensus       318 A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~-g~~~iv~~Ll~~ga~~~~~~-~~g~t~l~~A~~~g~~~~~~~  395 (437)
T 1n11_A          318 ASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQ-GHTDIVTLLLKNGASPNEVS-SDGTTPLAIAKRLGYISVTDV  395 (437)
T ss_dssp             HHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHTTCCSCCCC-SSSCCHHHHHHHTTCHHHHHH
T ss_pred             HHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHC-ChHHHHHHHHHCcCCCCCCC-CCCCCHHHHHHHcCcHHHHHH
Confidence            9999999999999999999999999999999999998 99999999999999999998 899999999999999999998


Q ss_pred             HHhh
Q psy15068        638 LHLI  641 (710)
Q Consensus       638 Ll~~  641 (710)
                      |...
T Consensus       396 l~~~  399 (437)
T 1n11_A          396 LKVV  399 (437)
T ss_dssp             HHHH
T ss_pred             HHhc
Confidence            8664

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=1.8e-63  Score=516.07  Aligned_cols=387  Identities=23%  Similarity=0.319  Sum_probs=256.8

Q ss_pred             cCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCC
Q psy15068        184 NGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGD  263 (710)
Q Consensus       184 ~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~  263 (710)
                      .|++++..+. .|.||||.|+..|+.+++++|++.|++++..+..+.+| ||.|+..|+.++++ +|.+.|++++..+..
T Consensus         3 ~g~~~~~~~~-~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~-L~~A~~~g~~~~v~-~Ll~~g~~~~~~~~~   79 (437)
T 1n11_A            3 PGISGGGGGE-SGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETP-LHMAARAGHTEVAK-YLLQNKAKVNAKAKD   79 (437)
T ss_dssp             -------------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCH-HHHHHHHTCHHHHH-HHHHHTCCSSCCCTT
T ss_pred             CCCCccccCC-CCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCH-HHHHHHcCCHHHHH-HHHhCCCCCCCCCCC
Confidence            4666666666 78888888888888888888888888877777777776 77777777777777 666677777777777


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCcchhhhhhcc
Q psy15068        264 LNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSL  343 (710)
Q Consensus       264 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~  343 (710)
                      |.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.                                 
T Consensus        80 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~---------------------------------  126 (437)
T 1n11_A           80 DQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHV---------------------------------  126 (437)
T ss_dssp             SCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCH---------------------------------
T ss_pred             CCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH---------------------------------
Confidence            77788877777777777777777777777777777777777777776                                 


Q ss_pred             CCcccccHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccc
Q psy15068        344 KDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFC  423 (710)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~  423 (710)
                                     +++++|++.+.+.+..+..|.||||+|+..|+.+++++|+++|++++..+..             
T Consensus       127 ---------------~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-------------  178 (437)
T 1n11_A          127 ---------------ETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKN-------------  178 (437)
T ss_dssp             ---------------HHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSS-------------
T ss_pred             ---------------HHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCC-------------
Confidence                           6677777777777777777777777777777777777777777777766555             


Q ss_pred             cCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhh
Q psy15068        424 FRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHST  503 (710)
Q Consensus       424 ~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a  503 (710)
                      |.|||+.|+.. ++.+++++|+++|.+++.. +..|.|||++|+..|+.+++++|+++|++++..+  ..+.+|  +|.|
T Consensus       179 g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~--~~g~t~--L~~A  252 (437)
T 1n11_A          179 GLTPLHVAVHH-NNLDIVKLLLPRGGSPHSP-AWNGYTPLHIAAKQNQVEVARSLLQYGGSANAES--VQGVTP--LHLA  252 (437)
T ss_dssp             CCCHHHHHHHT-TCHHHHHHHGGGTCCSCCC-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC--TTCCCH--HHHH
T ss_pred             CCCHHHHHHHc-CCHHHHHHHHhCCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC--CCCCCH--HHHH
Confidence            77777777777 7777777777777777666 6677777777777777777777777777666555  455555  5555


Q ss_pred             hhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCC
Q psy15068        504 TELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSAT  583 (710)
Q Consensus       504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~  583 (710)
                                            +..++.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..
T Consensus       253 ----------------------~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~  310 (437)
T 1n11_A          253 ----------------------AQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRM  310 (437)
T ss_dssp             ----------------------HHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSS
T ss_pred             ----------------------HHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCC
Confidence                                  5555555555555555555555555555555555555555555555555555555555


Q ss_pred             CCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHh
Q psy15068        584 GFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELM  663 (710)
Q Consensus       584 g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~  663 (710)
                      |+||||+|+.. |+.++|++|+++|++++.++ ..|.||||+|+..|+.++|++|+++|++++.+|..|+||| ++|+..
T Consensus       311 g~t~L~~A~~~-g~~~~v~~Ll~~gad~n~~~-~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l-~~A~~~  387 (437)
T 1n11_A          311 GYTPLHVASHY-GNIKLVKFLLQHQADVNAKT-KLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPL-AIAKRL  387 (437)
T ss_dssp             CCCHHHHHHHS-SCSHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHH-HHHHHT
T ss_pred             CCCHHHHHHHc-CcHHHHHHHHhcCCCCCCCC-CCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHH-HHHHHc
Confidence            55555555555 55555555555555555555 5555555555555555555555555555555555555555 555555


Q ss_pred             hh
Q psy15068        664 NS  665 (710)
Q Consensus       664 ~~  665 (710)
                      |+
T Consensus       388 g~  389 (437)
T 1n11_A          388 GY  389 (437)
T ss_dssp             TC
T ss_pred             Cc
Confidence            54

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=100.00  E-value=3.2e-45  Score=364.71  Aligned_cols=305  Identities=26%  Similarity=0.309  Sum_probs=239.3

Q ss_pred             ccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccC-CCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHh
Q psy15068         54 SVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQ-DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACY  132 (710)
Q Consensus        54 ~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~  132 (710)
                      .+|.|+||.|++.|++++|++||++|+ ++|.++. .|+||||+|+..|+.++|++|+++|++++.++..+.+|++.++.
T Consensus        23 ~~~~t~L~~Av~~g~~~~V~~LL~~Ga-dvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~  101 (337)
T 4g8k_A           23 VEDNHLLIKAVQNEDVDLVQQLLEGGA-NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAI  101 (337)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHHTC-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred             CCCChHHHHHHHcCCHHHHHHHHHCCC-CCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHh
Confidence            357788888888888888888888887 8877765 47888888888888888888888888888888888888888888


Q ss_pred             cCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHH
Q psy15068        133 LGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVV  212 (710)
Q Consensus       133 ~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v  212 (710)
                      .+...++..+++++++++..+..|                                        .||++.|+..|+.+++
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~d~~g----------------------------------------~t~l~~A~~~~~~~~~  141 (337)
T 4g8k_A          102 AGSVKLLKLFLSKGADVNECDFYG----------------------------------------FTAFMEAAVYGKVKAL  141 (337)
T ss_dssp             HTCHHHHHHHHTTTCCTTCBCTTC----------------------------------------CBHHHHHHHTTCHHHH
T ss_pred             cccchhhHHhhhccchhhhhccCC----------------------------------------CCHHHHHHHcCcHHHH
Confidence            888888888877777776655544                                        4555555555566666


Q ss_pred             HHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCC
Q psy15068        213 ELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVK-RKFDIN  291 (710)
Q Consensus       213 ~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~-~g~~~~  291 (710)
                      ++|+++|++++.....                         ..+....+..|.||||+|+..|+.++|++|++ .|++++
T Consensus       142 ~~ll~~ga~~~~~~~~-------------------------~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n  196 (337)
T 4g8k_A          142 KFLYKRGANVNLRRKT-------------------------KEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVN  196 (337)
T ss_dssp             HHHHHTTCCTTCCCCC-------------------------C-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTT
T ss_pred             HHHHHcCCCcchhhcc-------------------------ccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcC
Confidence            6666666655432221                         11234456678899999999999999999996 589999


Q ss_pred             CCcCCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCcchhhhhhccCCcccccHHHHHHHHHHHHHHHhcCCCC
Q psy15068        292 AQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENI  371 (710)
Q Consensus       292 ~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~  371 (710)
                      ..+..|.|+++.++..+..  .                                          ....++++|+++|+++
T Consensus       197 ~~d~~g~t~l~~~~~~~~~--~------------------------------------------~~~~i~~lLl~~gad~  232 (337)
T 4g8k_A          197 ACDNMGRNALIHALLSSDD--S------------------------------------------DVEAITHLLLDHGADV  232 (337)
T ss_dssp             CCCTTSCCHHHHHHHHSCT--T------------------------------------------THHHHHHHHHHTTCCT
T ss_pred             ccCCCCCcHHHHHHHHcCc--c------------------------------------------cHHHHHHHHHHCCCCC
Confidence            9999999999888776654  1                                          1115677888899999


Q ss_pred             CCCCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCC
Q psy15068        372 NAEGDDMITPLLFAAKHCDLQSAKYLIQK-GANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGAD  450 (710)
Q Consensus       372 ~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~  450 (710)
                      +.++..|.||||+|+..|+.+++++|++. |++++..+..             |+||||+|+.. ++.+++++|+++|++
T Consensus       233 n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~-------------G~TpL~~A~~~-g~~~iv~~Ll~~GAd  298 (337)
T 4g8k_A          233 NVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSD-------------GKTALLLAVEL-KLKKIAELLCKRGAS  298 (337)
T ss_dssp             TCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTT-------------SCBHHHHHHHT-TCHHHHHHHHTTSCS
T ss_pred             CCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCC-------------CCCHHHHHHHc-CCHHHHHHHHHCCCC
Confidence            99999999999999999999999999985 8899988777             99999999999 999999999999998


Q ss_pred             CCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCch
Q psy15068        451 VNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKE  488 (710)
Q Consensus       451 ~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~  488 (710)
                      ++..      +||++|+.+|+.++|++|+++|++++..
T Consensus       299 ~n~~------~~L~~A~~~~~~~iv~~Ll~~GA~~d~~  330 (337)
T 4g8k_A          299 TDCG------DLVMTARRNYDHSLVKVLLSHGAKEDFH  330 (337)
T ss_dssp             STTC------CHHHHHHHTTCHHHHHHHHHTTCCC---
T ss_pred             CCCC------CHHHHHHHcCCHHHHHHHHHCcCCCCCC
Confidence            8754      6999999999999999999999998854

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=100.00  E-value=5.4e-45  Score=363.04  Aligned_cols=255  Identities=24%  Similarity=0.286  Sum_probs=188.6

Q ss_pred             ccccchhhhhhcChhhHHHHHHhhhccCCCccc-cchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHc
Q psy15068         22 YRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKS-VELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQ  100 (710)
Q Consensus        22 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~  100 (710)
                      .+.|+|+.|+..|+.++|++|+++|+++|.++. .|+||||.|+..|+.++|++|+++|+ +++.++..+.++++.++..
T Consensus        24 ~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga-~~~~~~~~~~~~~~~~~~~  102 (337)
T 4g8k_A           24 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA-DPVLRKKNGATPFILAAIA  102 (337)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTCCCHHHHHHHH
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCC-chhhhccCCCchhHHHHhc
Confidence            467999999999999999999999999998876 58999999999999999999999999 9999999999999999999


Q ss_pred             CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHH
Q psy15068        101 GLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISM  180 (710)
Q Consensus       101 g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~  180 (710)
                      +..+++..+++.+++++..|..|.||||+|+..|+.+++++|+++|++++........                      
T Consensus       103 ~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~----------------------  160 (337)
T 4g8k_A          103 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKED----------------------  160 (337)
T ss_dssp             TCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC------------------------
T ss_pred             ccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccc----------------------
Confidence            9999999999999999999999999999999999999999999999998765432211                      


Q ss_pred             HHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHh-CCCCcchhhccCCChhHHHHHhcC---c-HHHHHHHHccCCC
Q psy15068        181 LIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIK-CKADTNLIVKVNQEPLLFFAIESN---S-VKIVEAFLNSKNF  255 (710)
Q Consensus       181 Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~~~~~l~~A~~~~---~-~~~v~~lL~~~~~  255 (710)
                             ...... .|.||||.|+..|+.+++++|++ .|++++..+..+.++ ++.++..+   . ..+++ +|++.|+
T Consensus       161 -------~~~~~~-~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~-l~~~~~~~~~~~~~~i~~-lLl~~ga  230 (337)
T 4g8k_A          161 -------QERLRK-GGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNA-LIHALLSSDDSDVEAITH-LLLDHGA  230 (337)
T ss_dssp             ----------CTT-CSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCH-HHHHHHHSCTTTHHHHHH-HHHHTTC
T ss_pred             -------cccccC-CCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcH-HHHHHHHcCcccHHHHHH-HHHHCCC
Confidence                   111122 67788888888888888888884 577777666666666 44333221   1 12333 4444555


Q ss_pred             ccccCCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCCcCCCCChHHHHHHhCC
Q psy15068        256 DVSISDGDLNSLLHKACHVGNLQIVQMLVKR-KFDINAQNRYFLPPMFFAIGMGR  309 (710)
Q Consensus       256 ~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~~t~l~~a~~~~~  309 (710)
                      +++..+..|.||||+|+..|+.+++++|++. |++++.++..|.||||+|+..|+
T Consensus       231 d~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~  285 (337)
T 4g8k_A          231 DVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKL  285 (337)
T ss_dssp             CTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTC
T ss_pred             CCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCC
Confidence            5555555555555555555555555554442 34444444444444444443333

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=100.00  E-value=3.5e-44  Score=361.00  Aligned_cols=338  Identities=21%  Similarity=0.218  Sum_probs=255.7

Q ss_pred             HhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCC
Q psy15068         43 LQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEK  122 (710)
Q Consensus        43 l~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~  122 (710)
                      .+.+.+.+..+..+.|+||.|++.|+.+.|+.|+.....+++.+|..|+||||+|+..|+.+++++|++.|++++..|..
T Consensus        11 ~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~   90 (351)
T 3utm_A           11 ADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKG   90 (351)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred             cCCceeeeeeccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC
Confidence            34444555566677888888888888888888887644478888888888888888888888888888888888888888


Q ss_pred             CCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHH
Q psy15068        123 GYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHF  202 (710)
Q Consensus       123 ~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~  202 (710)
                      |.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..+      +.+++++|+++|++++..+. .+.+|++.
T Consensus        91 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~v~~Ll~~g~~~~~~~~-~g~~~l~~  163 (351)
T 3utm_A           91 GLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKN------RVEVCSLLLSHGADPTLVNC-HGKSAVDM  163 (351)
T ss_dssp             CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT------CHHHHHHHHHTTCCTTCCCT-TSCCHHHH
T ss_pred             CCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC------CHHHHHHHHHcCCCCccccC-CCCcchHH
Confidence            888888888888888888888888888888888888888888888      88888888888888877776 78888888


Q ss_pred             HHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHc---CCHHH
Q psy15068        203 AVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHV---GNLQI  279 (710)
Q Consensus       203 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~---~~~~~  279 (710)
                      |+..+..+.+++....            .+ +..++..+..+.++.++... ......+..|.||||+|+..   +..++
T Consensus       164 a~~~~~~~~~~~~~~~------------~~-~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~t~L~~A~~~~~~~~~~~  229 (351)
T 3utm_A          164 APTPELRERLTYEFKG------------HS-LLQAAREADLAKVKKTLALE-IINFKQPQSHETALHCAVASLHPKRKQV  229 (351)
T ss_dssp             CSSHHHHHHHHHHHHH------------HH-HHHHHHTTCHHHHHHHTTTC-CTTCCCTTTCCCHHHHHHHCCSTTHHHH
T ss_pred             HhhhhhHHHHHhhhcc------------cH-HHHHHHhccHHHHHHHHHhh-cccccCCCCCCCHHHHHHHHhCccHHHH
Confidence            8877777777665531            22 77788888888888455443 34445667788999999988   55889


Q ss_pred             HHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCcchhhhhhccCCcccccHHHHHHHHH
Q psy15068        280 VQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQ  359 (710)
Q Consensus       280 v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (710)
                      +++|+++|++++..+..|.||||+|+..++.                                                +
T Consensus       230 ~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~------------------------------------------------~  261 (351)
T 3utm_A          230 AELLLRKGANVNEKNKDFMTPLHVAAERAHN------------------------------------------------D  261 (351)
T ss_dssp             HHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH------------------------------------------------H
T ss_pred             HHHHHHcCCCcCCcCCCCCCHHHHHHHcCCH------------------------------------------------H
Confidence            9999999999999999999999999998887                                                5


Q ss_pred             HHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHH
Q psy15068        360 IIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIE  439 (710)
Q Consensus       360 ~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~  439 (710)
                      ++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+..             |.||+++|     ..+
T Consensus       262 ~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~-------------g~tal~~a-----~~~  323 (351)
T 3utm_A          262 VMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQ-------------GFTAAQMG-----NEA  323 (351)
T ss_dssp             HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-------------SCCHHHHS-----CHH
T ss_pred             HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCC-------------CCChhhhh-----hHH
Confidence            666666688888888999999999999999999999999999999888777             89998886     456


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCC
Q psy15068        440 MVKLLLLHGADVNDTSNKPKQKPLAVAIQSGD  471 (710)
Q Consensus       440 ~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~  471 (710)
                      ++++|.+.+...    ...+.+++..|++.|+
T Consensus       324 ~~~~l~~~~~~~----~~~~~~~l~~A~~~gd  351 (351)
T 3utm_A          324 VQQILSESTPMR----TSDVDYRLLEASKAGD  351 (351)
T ss_dssp             HHHHHHHC------------------------
T ss_pred             HHHHHHhccccc----cCcceeehhhhhccCC
Confidence            888888877654    3456678888887763

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=100.00  E-value=5e-43  Score=352.56  Aligned_cols=327  Identities=21%  Similarity=0.198  Sum_probs=284.4

Q ss_pred             ccccccccchhhhhhcChhhHHHHHHhh-hccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHH
Q psy15068         18 KESSYRHHHLFSEIMFSEEDAFGYFLQG-IINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYM   96 (710)
Q Consensus        18 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~   96 (710)
                      ....++.++|+.|+..|+.+.+++|+.. +.+++..|..|.||||.|+..|+.++|++|++.|+ +++.++..|+||||+
T Consensus        19 ~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~   97 (351)
T 3utm_A           19 LTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGA-DVHAKDKGGLVPLHN   97 (351)
T ss_dssp             HHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTCCCHHHH
T ss_pred             eeccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCccCCCCCcHHHH
Confidence            3456678999999999999999999975 88999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHH
Q psy15068         97 AILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNE  176 (710)
Q Consensus        97 A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~  176 (710)
                      |+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+..+.+|+++++..+      ..+
T Consensus        98 A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~------~~~  171 (351)
T 3utm_A           98 ACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPE------LRE  171 (351)
T ss_dssp             HHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHH------HHH
T ss_pred             HHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhh------hHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999888      888


Q ss_pred             HHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhc---CcHHHHHHHHccC
Q psy15068        177 IISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIES---NSVKIVEAFLNSK  253 (710)
Q Consensus       177 ~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~---~~~~~v~~lL~~~  253 (710)
                      .+.+....             .++..++..+..+.++.++..+......+..+.+| |+.|+..   +..++++ +|.+.
T Consensus       172 ~~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~-L~~A~~~~~~~~~~~~~-~Ll~~  236 (351)
T 3utm_A          172 RLTYEFKG-------------HSLLQAAREADLAKVKKTLALEIINFKQPQSHETA-LHCAVASLHPKRKQVAE-LLLRK  236 (351)
T ss_dssp             HHHHHHHH-------------HHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCH-HHHHHHCCSTTHHHHHH-HHHHT
T ss_pred             HHHhhhcc-------------cHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCH-HHHHHHHhCccHHHHHH-HHHHc
Confidence            88776532             57888999999999999998876666666677777 9999999   6689999 88899


Q ss_pred             CCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCC
Q psy15068        254 NFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRP  333 (710)
Q Consensus       254 ~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~  333 (710)
                      |++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.                       
T Consensus       237 g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~-----------------------  293 (351)
T 3utm_A          237 GANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHL-----------------------  293 (351)
T ss_dssp             TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH-----------------------
T ss_pred             CCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcH-----------------------
Confidence            999999999999999999999999999999999999999999999999999999988                       


Q ss_pred             cchhhhhhccCCcccccHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhh
Q psy15068        334 NLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAF  413 (710)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~  413 (710)
                                               +++++|+++|++++.++..|.||+++|    ..+++++|.+.+.....   .   
T Consensus       294 -------------------------~~v~~Ll~~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~~~~~---~---  338 (351)
T 3utm_A          294 -------------------------QTCRLLLSYGSDPSIISLQGFTAAQMG----NEAVQQILSESTPMRTS---D---  338 (351)
T ss_dssp             -------------------------HHHHHHHHTTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC-------------
T ss_pred             -------------------------HHHHHHHHcCCCCCCcCCCCCChhhhh----hHHHHHHHHhccccccC---c---
Confidence                                     666677779999999999999999997    67888888887553211   1   


Q ss_pred             hhccccCccccCCHHHHHHHc
Q psy15068        414 ISDARSSDFCFRSALQYACKH  434 (710)
Q Consensus       414 ~~~~~~~~~~~~t~l~~A~~~  434 (710)
                                +.+++..|++.
T Consensus       339 ----------~~~~l~~A~~~  349 (351)
T 3utm_A          339 ----------VDYRLLEASKA  349 (351)
T ss_dssp             ---------------------
T ss_pred             ----------ceeehhhhhcc
Confidence                      56788888776

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=1.7e-42  Score=337.66  Aligned_cols=264  Identities=24%  Similarity=0.344  Sum_probs=231.6

Q ss_pred             ccccchhhhhhcChhhHHHHHHhhhccCCCc-cccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHc
Q psy15068         22 YRHHHLFSEIMFSEEDAFGYFLQGIINSSSA-KSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQ  100 (710)
Q Consensus        22 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~  100 (710)
                      .+.++|+.|+..|+.+++++|+++|.+++.. +..|.||||.|+..|+.+++++|++.|+ +++.++..|.||||+|+..
T Consensus         4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~   82 (285)
T 1wdy_A            4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA-DPVLRKKNGATPFLLAAIA   82 (285)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTCCCHHHHHHHH
T ss_pred             ccchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC-CCcccCCCCCCHHHHHHHc
Confidence            3678899999999999999999999888887 7788899999999999999999999998 8899999999999999999


Q ss_pred             CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCcccc----------ccCCCchhHHhhhccCCC
Q psy15068        101 GLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAK----------CSMMVTPILAVSANMSED  170 (710)
Q Consensus       101 g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~----------~~~~~~~l~~a~~~~~~~  170 (710)
                      |+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..          +..|.|||+.|+..+   
T Consensus        83 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~---  159 (285)
T 1wdy_A           83 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKG---  159 (285)
T ss_dssp             TCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHT---
T ss_pred             CCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcC---
Confidence            9999999999999999999999999999999999999999999999888776          677888899888888   


Q ss_pred             CCCHHHHHHHHHHc-CCCcccCCCCCCCCHHHHHHHhCC----HHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHH
Q psy15068        171 STDTNEIISMLIEN-GANVREKMPFTDFSPLHFAVVKKN----LSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKI  245 (710)
Q Consensus       171 ~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~~l~~A~~~~~----~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~  245 (710)
                         +.+++++|+++ |++++..+. .|.|||+.|+..++    .+++++|++.|++++..+..+.+| ||.|+..|+.++
T Consensus       160 ---~~~~v~~Ll~~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~-L~~A~~~~~~~~  234 (285)
T 1wdy_A          160 ---HVEVLKILLDEMGADVNACDN-MGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTP-LILAVEKKHLGL  234 (285)
T ss_dssp             ---CHHHHHHHHHTSCCCTTCCCT-TSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCH-HHHHHHTTCHHH
T ss_pred             ---CHHHHHHHHHhcCCCCCccCC-CCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcH-HHHHHHcCCHHH
Confidence               88888888887 888888777 88889988888888    888888888888888888888888 888888888888


Q ss_pred             HHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCc
Q psy15068        246 VEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQN  294 (710)
Q Consensus       246 v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~  294 (710)
                      +++++...|++++..+..|.|||++|+..|+.+++++|+++|++++.+|
T Consensus       235 v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d  283 (285)
T 1wdy_A          235 VQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD  283 (285)
T ss_dssp             HHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred             HHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCccc
Confidence            8855555888888888888888888888888888888888888887765

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=9.3e-42  Score=332.36  Aligned_cols=256  Identities=27%  Similarity=0.309  Sum_probs=240.8

Q ss_pred             ccchhHHHHHHhcCCHHHHHHHHhcCCCCCccc-cCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHh
Q psy15068         54 SVELTLLCSAVWDNKIREVEFLLSTGDHDVNEK-LQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACY  132 (710)
Q Consensus        54 ~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~  132 (710)
                      .+|.|+|+.|++.|+.++|++|++.++ +++.. +..|+||||+|+..|+.+++++|++.|++++..+..|.||||+|+.
T Consensus         3 ~~g~~~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~   81 (285)
T 1wdy_A            3 VEDNHLLIKAVQNEDVDLVQQLLEGGA-NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAI   81 (285)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred             cccchHHHHHHHcCCHHHHHHHHHcCC-CcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence            468999999999999999999999999 88887 7889999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCC---------CCCCCCHHHHH
Q psy15068        133 LGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKM---------PFTDFSPLHFA  203 (710)
Q Consensus       133 ~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~---------~~~~~~~l~~A  203 (710)
                      .|+.+++++|+++|++++..+..|.|||++|+..+      +.+++++|+++|++++...         ...|.|||+.|
T Consensus        82 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A  155 (285)
T 1wdy_A           82 AGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYG------KVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDA  155 (285)
T ss_dssp             HTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTT------CHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHH
T ss_pred             cCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhC------CHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHH
Confidence            99999999999999999999999999999999999      9999999999999988762         23789999999


Q ss_pred             HHhCCHHHHHHHHhC-CCCcchhhccCCChhHHHHHhcCc----HHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHH
Q psy15068        204 VVKKNLSVVELLIKC-KADTNLIVKVNQEPLLFFAIESNS----VKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQ  278 (710)
Q Consensus       204 ~~~~~~~~v~~Ll~~-g~~~~~~~~~~~~~~l~~A~~~~~----~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~  278 (710)
                      +..|+.+++++|++. |++++..+..+.+| |+.|+..++    .++++ +|.+.|++++..+..|.||||+|+..|+.+
T Consensus       156 ~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~-l~~a~~~~~~~~~~~i~~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~  233 (285)
T 1wdy_A          156 AEKGHVEVLKILLDEMGADVNACDNMGRNA-LIHALLSSDDSDVEAITH-LLLDHGADVNVRGERGKTPLILAVEKKHLG  233 (285)
T ss_dssp             HHHTCHHHHHHHHHTSCCCTTCCCTTSCCH-HHHHHHCSCTTTHHHHHH-HHHHTTCCSSCCCTTSCCHHHHHHHTTCHH
T ss_pred             HHcCCHHHHHHHHHhcCCCCCccCCCCCCH-HHHHHHccccchHHHHHH-HHHHcCCCCCCcCCCCCcHHHHHHHcCCHH
Confidence            999999999999987 99999999999998 999999999    89999 888899999999999999999999999999


Q ss_pred             HHHHHHH-cCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhh
Q psy15068        279 IVQMLVK-RKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQ  320 (710)
Q Consensus       279 ~v~~Ll~-~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~  320 (710)
                      ++++|++ .|++++..+..|.|||++|+..++.  +++++|++
T Consensus       234 ~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~--~i~~~Ll~  274 (285)
T 1wdy_A          234 LVQRLLEQEHIEINDTDSDGKTALLLAVELKLK--KIAELLCK  274 (285)
T ss_dssp             HHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCH--HHHHHHHH
T ss_pred             HHHHHHhccCCCccccCCCCCcHHHHHHHcCcH--HHHHHHHH
Confidence            9999999 8999999999999999999999988  44444444

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=100.00  E-value=2.7e-42  Score=346.90  Aligned_cols=326  Identities=18%  Similarity=0.165  Sum_probs=246.2

Q ss_pred             CCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCC
Q psy15068        197 FSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGN  276 (710)
Q Consensus       197 ~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~  276 (710)
                      ..+|..++..|+.+.+..+++.......    .+.+ +..+...|++++++ ++..     ...+..|.||||+|+..+.
T Consensus        38 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~g~~~~~~-~~~~-----~~~~~~g~t~L~~Aa~~~~  106 (373)
T 2fo1_E           38 QHSLLEASYDGYIKRQRNELQHYSLYPN----PQGY-GNGNDFLGDFNHTN-LQIP-----TEPEPESPIKLHTEAAGSY  106 (373)
T ss_dssp             -------------------------------------------------------------------CCCHHHHHHHSSS
T ss_pred             ccccccccCCccccchhhhhhhhccccC----cccc-CCCCCccccccccc-cccc-----cCCCCCCccHHHHHhcCCc
Confidence            3467777788888888888876655431    1222 56677788888888 4432     2457788999999999554


Q ss_pred             HHHHHHHHHcCCCCCCCc-CCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCcchhhhhhccCCcccccHHHHH
Q psy15068        277 LQIVQMLVKRKFDINAQN-RYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIK  355 (710)
Q Consensus       277 ~~~v~~Ll~~g~~~~~~~-~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (710)
                       +++++|+.  .+++..+ ..|.||||+|+..|+.  +++++|+.                                   
T Consensus       107 -~~~~~L~~--~~~n~~d~~~g~t~Lh~Aa~~g~~--~~v~~Ll~-----------------------------------  146 (373)
T 2fo1_E          107 -AITEPITR--ESVNIIDPRHNRTVLHWIASNSSA--EKSEDLIV-----------------------------------  146 (373)
T ss_dssp             -CCCSCCST--TTTTTCCCSSCCCHHHHHHCTTCC--SCCTTHHH-----------------------------------
T ss_pred             -hHHHHhcc--ccccccCCcCCCCHHHHHHHCCCH--HHHHHHHH-----------------------------------
Confidence             78888865  4677777 7899999999999998  99999988                                   


Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHcc
Q psy15068        356 RLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHK  435 (710)
Q Consensus       356 ~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~  435 (710)
                         ..++.+++.|++++.++..|.||||+|+..|+.+++++|+++|++++..+..             |.||||+|+.. 
T Consensus       147 ---~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~-------------g~t~L~~A~~~-  209 (373)
T 2fo1_E          147 ---HEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKS-------------ERSALHQAAAN-  209 (373)
T ss_dssp             ---HHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT-------------CCCHHHHHHHT-
T ss_pred             ---HHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCC-------------CCCHHHHHHHC-
Confidence               7888999999999999999999999999999999999999999999988777             99999999999 


Q ss_pred             CcHHHHHHHHHCC---CCCCCCCCCCCCCHHHHHHHcC---CHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHH
Q psy15068        436 NNIEMVKLLLLHG---ADVNDTSNKPKQKPLAVAIQSG---DFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEER  509 (710)
Q Consensus       436 ~~~~~~~~Ll~~~---~~~~~~~~~~~~t~L~~A~~~~---~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~  509 (710)
                      ++.+++++|++++   .+++.. +..|.||||+|+..+   +.+++++|+++|++++...  .                 
T Consensus       210 g~~~~v~~Ll~~~~~~~~~~~~-d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~--~-----------------  269 (373)
T 2fo1_E          210 RDFGMMVYMLNSTKLKGDIEEL-DRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDG--A-----------------  269 (373)
T ss_dssp             TCHHHHHHHTTSHHHHHTTSCC-CTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCS--G-----------------
T ss_pred             CCHHHHHHHHhcCccccChhhc-CCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCccccc--c-----------------
Confidence            9999999999998   788887 899999999999998   8999999999999887543  0                 


Q ss_pred             HhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCcHH
Q psy15068        510 KKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNG-ADVNFKSATGFTAL  588 (710)
Q Consensus       510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L  588 (710)
                                                      ...+..+..|.||||+|+..|+.+++++|+++| ++++.+|..|+|||
T Consensus       270 --------------------------------~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL  317 (373)
T 2fo1_E          270 --------------------------------ARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPI  317 (373)
T ss_dssp             --------------------------------GGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHH
T ss_pred             --------------------------------cccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHH
Confidence                                            012456788999999999999999999999886 99999999999999


Q ss_pred             HHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhc
Q psy15068        589 HMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNL  644 (710)
Q Consensus       589 ~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~  644 (710)
                      |+|+.. |+.++|++|+++|++++.++ ..|.||||+|+..|+.+++++|++++++
T Consensus       318 ~~A~~~-g~~~iv~~Ll~~gad~~~~d-~~g~t~l~~A~~~g~~~iv~~Ll~~~a~  371 (373)
T 2fo1_E          318 MLAAQE-GRIEVVMYLIQQGASVEAVD-ATDHTARQLAQANNHHNIVDIFDRCRPE  371 (373)
T ss_dssp             HHHHHH-TCHHHHHHHHHTTCCSSCCC-SSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred             HHHHHc-CCHHHHHHHHHcCCCccCCC-CCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence            999999 99999999999999999999 9999999999999999999999999876

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=100.00  E-value=5e-40  Score=317.29  Aligned_cols=228  Identities=22%  Similarity=0.272  Sum_probs=127.4

Q ss_pred             cccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhh
Q psy15068         85 EKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVS  164 (710)
Q Consensus        85 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~  164 (710)
                      .++..|+||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.++|++|+++|++++..+..|.|||++|+
T Consensus        54 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~  133 (285)
T 3d9h_A           54 GDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNAC  133 (285)
T ss_dssp             SSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHH
T ss_pred             CCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence            34444444444444444444444444444444444444444444444444444444444444444444444444444444


Q ss_pred             hccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHH
Q psy15068        165 ANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVK  244 (710)
Q Consensus       165 ~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~  244 (710)
                      ..+      +.+++++|+++|++++...  .|.|||+.|+..|+.+++++|++.|++++..+..+.+| |+.|+..|+.+
T Consensus       134 ~~~------~~~~v~~Ll~~g~~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~-L~~A~~~~~~~  204 (285)
T 3d9h_A          134 VSG------SWDCVNLLLQHGASVQPES--DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTP-LYLACENQQRA  204 (285)
T ss_dssp             HHT------CHHHHHHHHHTTCCSSCSC--TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCH-HHHHHHTTCHH
T ss_pred             HcC------HHHHHHHHHHCCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCH-HHHHHHcCcHH
Confidence            444      4444444444444443322  35556666666666666666666666665555555555 66666666666


Q ss_pred             HHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccc
Q psy15068        245 IVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSI  324 (710)
Q Consensus       245 ~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~  324 (710)
                      +++ +|.+.|++++. +..|.||||+|+..++.+++++|+++|++++.++..|.|||++|+  ++.  +++++|++..+.
T Consensus       205 ~v~-~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~--~~~~~Ll~~~~a  278 (285)
T 3d9h_A          205 CVK-KLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--PES--PLAQLFLEREGA  278 (285)
T ss_dssp             HHH-HHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTS--HHHHHHHHHC--
T ss_pred             HHH-HHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--Ccc--HHHHHHHHhhcc
Confidence            666 44555556553 566677777777777777777777777777777777777777776  333  777777775454


Q ss_pred             cCC
Q psy15068        325 NVN  327 (710)
Q Consensus       325 ~~~  327 (710)
                      +..
T Consensus       279 ~l~  281 (285)
T 3d9h_A          279 SLP  281 (285)
T ss_dssp             ---
T ss_pred             CCC
Confidence            443

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=100.00  E-value=3.3e-40  Score=318.51  Aligned_cols=260  Identities=21%  Similarity=0.216  Sum_probs=213.5

Q ss_pred             cccccccchhhhhhcChhhHHHHHHhhh-----------ccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCcccc
Q psy15068         19 ESSYRHHHLFSEIMFSEEDAFGYFLQGI-----------INSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKL   87 (710)
Q Consensus        19 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~-----------~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~   87 (710)
                      .+..+.|+||+|+..|+.+.+..++..+           ..++..|..|+||||.|+..|+.++|++|++.|+ +++.++
T Consensus        11 ~~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~-~~~~~~   89 (285)
T 3d9h_A           11 SSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGW-AVNIIT   89 (285)
T ss_dssp             -------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTC-CSCEEC
T ss_pred             cchHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCC-CCCCcC
Confidence            4567889999999999988777765432           2367788999999999999999999999999999 999999


Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhcc
Q psy15068         88 QDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANM  167 (710)
Q Consensus        88 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~  167 (710)
                      ..|+||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++..+ .|.|||++|+..+
T Consensus        90 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g  168 (285)
T 3d9h_A           90 ADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRG  168 (285)
T ss_dssp             TTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHT
T ss_pred             CCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcC
Confidence            999999999999999999999999999999999999999999999999999999999999988654 5999999999999


Q ss_pred             CCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHH
Q psy15068        168 SEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVE  247 (710)
Q Consensus       168 ~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~  247 (710)
                            +.+++++|+++|++++..+. .|.|||+.|+..|+.+++++|++.|++++. +..+.+| |++|+..++.++++
T Consensus       169 ------~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~-L~~A~~~~~~~~v~  239 (285)
T 3d9h_A          169 ------HVECVNSLIAYGGNIDHKIS-HLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSP-LHAVVRTASEELAC  239 (285)
T ss_dssp             ------CHHHHHHHHHTTCCTTCCBT-TTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCH-HHHHHHTTCHHHHH
T ss_pred             ------CHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCH-HHHHHHcCCHHHHH
Confidence                  99999999999999998888 999999999999999999999999999985 6677777 99999999999999


Q ss_pred             HHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCC
Q psy15068        248 AFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKR-KFDINA  292 (710)
Q Consensus       248 ~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~  292 (710)
                       +|.+.|++++..|..|.|||++|+  ++.+++++|+++ |+++..
T Consensus       240 -~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~l~~  282 (285)
T 3d9h_A          240 -LLMDFGADTQAKNAEGKRPVELVP--PESPLAQLFLEREGASLPK  282 (285)
T ss_dssp             -HHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC------
T ss_pred             -HHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhccCCCC
Confidence             788899999999999999999999  557999999998 766543

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=100.00  E-value=6.1e-41  Score=337.08  Aligned_cols=311  Identities=17%  Similarity=0.153  Sum_probs=210.6

Q ss_pred             cccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCc
Q psy15068         23 RHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGL  102 (710)
Q Consensus        23 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~  102 (710)
                      -..+|..++..|+.+.+..++++...+.    .-.+++..+...|+.+++++++..      ..+..|+||||+|+..+.
T Consensus        37 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~------~~~~~g~t~L~~Aa~~~~  106 (373)
T 2fo1_E           37 SQHSLLEASYDGYIKRQRNELQHYSLYP----NPQGYGNGNDFLGDFNHTNLQIPT------EPEPESPIKLHTEAAGSY  106 (373)
T ss_dssp             -------------------------------------------------------------------CCCHHHHHHHSSS
T ss_pred             cccccccccCCccccchhhhhhhhcccc----CccccCCCCCcccccccccccccc------CCCCCCccHHHHHhcCCc
Confidence            4466777778888888888887665543    123456667777888888877554      346778888888888554


Q ss_pred             HHHHHHHHHcCCCCCCCC-CCCCCHHHHHHhcCCHHHHHHHH--------hCCCCccccccCCCchhHHhhhccCCCCCC
Q psy15068        103 YKMVTLLIHHGANVNDRD-EKGYTPLHLACYLGNKNIVKFLL--------SKKADVRAKCSMMVTPILAVSANMSEDSTD  173 (710)
Q Consensus       103 ~~~v~~Ll~~g~~~~~~~-~~~~t~L~~A~~~g~~~iv~~Ll--------~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~  173 (710)
                       +++++|+.  .+++..| ..|.||||+|+..|+.+++++|+        ++|++++..+..|.||||+|+..+      
T Consensus       107 -~~~~~L~~--~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g------  177 (373)
T 2fo1_E          107 -AITEPITR--ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLAR------  177 (373)
T ss_dssp             -CCCSCCST--TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHT------
T ss_pred             -hHHHHhcc--ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcC------
Confidence             67777654  4666777 67888888888888887777665        678888888888888888888888      


Q ss_pred             HHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCC---CCcchhhccCCChhHHHHHhcC---cHHHHH
Q psy15068        174 TNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCK---ADTNLIVKVNQEPLLFFAIESN---SVKIVE  247 (710)
Q Consensus       174 ~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~~~~~~l~~A~~~~---~~~~v~  247 (710)
                      +.+++++|+++|++++..+. .|.|||+.|+..|+.+++++|++.+   ++++..+..+.+| |++|+..+   +.++++
T Consensus       178 ~~~iv~~Ll~~ga~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~-L~~A~~~~~~~~~~~v~  255 (373)
T 2fo1_E          178 RRRLVAYLMKAGADPTIYNK-SERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTA-LMIVAHNEGRDQVASAK  255 (373)
T ss_dssp             CHHHHHHHHHTTCCSCCCCT-TCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCH-HHHHHHSCSTTHHHHHH
T ss_pred             hHHHHHHHHHCCCCCcccCC-CCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCH-HHHHHHhCCcchHHHHH
Confidence            88888888888888887776 7888888888888888888888877   6777777777777 88888777   788888


Q ss_pred             HHHccCCCcccc--------CCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCCcCCCCChHHHHHHhCCCcHHHHHHH
Q psy15068        248 AFLNSKNFDVSI--------SDGDLNSLLHKACHVGNLQIVQMLVKRK-FDINAQNRYFLPPMFFAIGMGRKHTHVAEYL  318 (710)
Q Consensus       248 ~lL~~~~~~~~~--------~~~~~~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~L  318 (710)
                       +|.+.|++++.        .+..|.||||+|+..|+.+++++|++++ ++++..+..|.||||+|+..|+.        
T Consensus       256 -~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~--------  326 (373)
T 2fo1_E          256 -LLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRI--------  326 (373)
T ss_dssp             -HHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCH--------
T ss_pred             -HHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCH--------
Confidence             77777777765        5678999999999999999999999886 99999999999999999999988        


Q ss_pred             hhcccccCCCCCCCCcchhhhhhccCCcccccHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy15068        319 LQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLI  398 (710)
Q Consensus       319 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll  398 (710)
                                                              +++++|+++|++++.++..|.|||++|+..|+.+++++|+
T Consensus       327 ----------------------------------------~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll  366 (373)
T 2fo1_E          327 ----------------------------------------EVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFD  366 (373)
T ss_dssp             ----------------------------------------HHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHH
T ss_pred             ----------------------------------------HHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence                                                    6666667789999999999999999999999999999999


Q ss_pred             HcCCC
Q psy15068        399 QKGAN  403 (710)
Q Consensus       399 ~~g~~  403 (710)
                      +++++
T Consensus       367 ~~~a~  371 (373)
T 2fo1_E          367 RCRPE  371 (373)
T ss_dssp             TTC--
T ss_pred             hcCcc
Confidence            98875

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=100.00  E-value=1.2e-40  Score=335.49  Aligned_cols=263  Identities=18%  Similarity=0.196  Sum_probs=185.9

Q ss_pred             CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHC
Q psy15068        368 TENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLH  447 (710)
Q Consensus       368 ~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~  447 (710)
                      +.+.+..+..|.||||+|+..|+.+++++|++.|++++..+..             |.||||+|+.. ++.+++++|+++
T Consensus        10 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~-------------g~t~L~~A~~~-g~~~~v~~Ll~~   75 (364)
T 3ljn_A           10 KLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRF-------------GCTALHLACKF-GCVDTAKYLASV   75 (364)
T ss_dssp             ------CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-------------CCCHHHHHHHH-CCHHHHHHHHHH
T ss_pred             CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCC-------------CCcHHHHHHHc-CCHHHHHHHHHC
Confidence            3456778889999999999999999999999999999988877             99999999999 999999999999


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHc----CCCCCc-----------------hhhccchHHHHhhhhhhhH
Q psy15068        448 GADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNY----GAQIDK-----------------ENYLKNKEAARIAHSTTEL  506 (710)
Q Consensus       448 ~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~----~~~~~~-----------------~~~~~~~~~~~~l~~a~~~  506 (710)
                      |++++   ...|.||||+|+..|+.+++++|++.    |++++.                 .+  ..+.+|  +|.|   
T Consensus        76 g~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~t~--L~~A---  145 (364)
T 3ljn_A           76 GEVHS---LWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKH--CKGQTA--LHWC---  145 (364)
T ss_dssp             CCCCC---CBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEE--ESCCCH--HHHH---
T ss_pred             CCCcc---ccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCC--CCCCCH--HHHH---
Confidence            99765   45799999999999999999999998    666554                 33  455555  6666   


Q ss_pred             HHHHhhhHHHhhhHHHHHhhhcC--chHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-----Ccc
Q psy15068        507 EERKKINDLLKLNLDFLKNVRSN--KYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGAD-----VNF  579 (710)
Q Consensus       507 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~  579 (710)
                                         +..+  +.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++     ++.
T Consensus       146 -------------------~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~  206 (364)
T 3ljn_A          146 -------------------VGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDY  206 (364)
T ss_dssp             -------------------HHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTC
T ss_pred             -------------------HHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccc
Confidence                               5555  56666666666666666666666666666666666666666666655     666


Q ss_pred             cCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhcccc------------
Q psy15068        580 KSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFAS------------  647 (710)
Q Consensus       580 ~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------  647 (710)
                      .|..|+||||+|+.. |+.++|++|+++|++++.++ ..|.||||+|+..|+.+++++|+++|++++.            
T Consensus       207 ~~~~g~t~L~~A~~~-g~~~~v~~Ll~~gad~~~~d-~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~  284 (364)
T 3ljn_A          207 ANKQGNSHLHWAILI-NWEDVAMRFVEMGIDVNMED-NEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVL  284 (364)
T ss_dssp             CCTTCCCTTHHHHTT-TCHHHHHHHHTTTCCTTCCC-TTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBC
T ss_pred             cCCCCCcHHHHHHHc-CCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCccccc
Confidence            666666666666665 66666666666666666666 6666666666666666666666666555432            


Q ss_pred             CCCCCCCchhhHHHHhhh---cccccceeehhH
Q psy15068        648 VTNPYDPNVYHRIELMNS---AKQLGLVHVFEI  677 (710)
Q Consensus       648 ~~~~g~t~L~~~A~~~~~---~~~L~~~~g~~~  677 (710)
                      .+..|+||+ +.|+..++   +..| ++.+++.
T Consensus       285 ~~~~~~~~l-~~aa~~~~~~~v~~l-l~~~~~~  315 (364)
T 3ljn_A          285 PDRVVWLDF-VPAAADPSKQEVLQL-LQEKLDE  315 (364)
T ss_dssp             GGGCCCCTT-SCSSCCHHHHHHHHH-HHHHHHH
T ss_pred             ccccccccc-hhhhhccCHHHHHHH-HHHHHHH
Confidence            344555666 66665554   4445 5555544

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=100.00  E-value=3.7e-40  Score=332.04  Aligned_cols=244  Identities=18%  Similarity=0.108  Sum_probs=229.9

Q ss_pred             ccccCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhh
Q psy15068        421 DFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIA  500 (710)
Q Consensus       421 ~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l  500 (710)
                      |..|.||||+|+.. |+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|+++|++++.    ..+.+|  +
T Consensus        17 d~~g~t~L~~Aa~~-g~~~~v~~Ll~~g~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~----~~g~t~--L   88 (364)
T 3ljn_A           17 DDENMEKIHVAARK-GQTDEVRRLIETGVSPTIQ-NRFGCTALHLACKFGCVDTAKYLASVGEVHSL----WHGQKP--I   88 (364)
T ss_dssp             CHHHHHHHHHHHHH-TCHHHHHHHHHTTCCTTCC-CTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC----BTTBCH--H
T ss_pred             CCCCCCHHHHHHHc-CCHHHHHHHHHcCCCcccc-CCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc----cCCCCH--H
Confidence            33499999999999 9999999999999999988 99999999999999999999999999997664    468889  9


Q ss_pred             hhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhc----CCcccc-----------------cCCCCCcHHHHHH
Q psy15068        501 HSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIED----GACVNV-----------------SSERRGSALIYVA  559 (710)
Q Consensus       501 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~----~~~~~~-----------------~~~~g~t~L~~A~  559 (710)
                      |.|                      +..++.+++++|++.    |.+++.                 .+..|.||||+|+
T Consensus        89 ~~A----------------------~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~  146 (364)
T 3ljn_A           89 HLA----------------------VMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCV  146 (364)
T ss_dssp             HHH----------------------HHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHH
T ss_pred             HHH----------------------HHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHH
Confidence            999                      999999999999998    888877                 8889999999999


Q ss_pred             HcC--CHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCC-----CCCCCCCCCCCHhHHHHhCCCh
Q psy15068        560 WKG--YEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAY-----YDMKDGKTGKTPLKHAEAGKNR  632 (710)
Q Consensus       560 ~~~--~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~-----~~~~~~~~g~t~L~~A~~~~~~  632 (710)
                      ..|  +.+++++|+++|++++..|..|.||||+|+.. |+.+++++|+++|++     ++..+ ..|.||||+|+..|+.
T Consensus       147 ~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~g~~~~~~~~~~~~-~~g~t~L~~A~~~g~~  224 (364)
T 3ljn_A          147 GLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEF-RNREALDLMMDTVPSKSSLRLDYAN-KQGNSHLHWAILINWE  224 (364)
T ss_dssp             HSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHHCSCSSSCCTTCCC-TTCCCTTHHHHTTTCH
T ss_pred             HcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc-CCHHHHHHHHhcccccccccccccC-CCCCcHHHHHHHcCCH
Confidence            999  99999999999999999999999999999999 999999999999999     99999 9999999999999999


Q ss_pred             hHHHHHHhhhhccccCCCCCCCchhhHHHHhhh---cccccceeehhHHHHh------------hhcccchhHHHHhhhc
Q psy15068        633 DIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS---AKQLGLVHVFEIMKVV------------KNYAGETLIGVARKMN  697 (710)
Q Consensus       633 ~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~~~~~~~------------~~~~G~t~l~~a~~~~  697 (710)
                      ++|++|+++|+++|.+|..|.||| |+|+..|+   +++| +++|+++  +.            .+..|+|||++|+..|
T Consensus       225 ~~v~~Ll~~gad~~~~d~~g~tpL-~~A~~~g~~~~v~~L-l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~  300 (364)
T 3ljn_A          225 DVAMRFVEMGIDVNMEDNEHTVPL-YLSVRAAMVLLTKEL-LQKTDVF--LIQACPYHNGTTVLPDRVVWLDFVPAAADP  300 (364)
T ss_dssp             HHHHHHHTTTCCTTCCCTTSCCHH-HHHHHTCCHHHHHHH-HHHSCHH--HHHTCTTBSSSSBCGGGCCCCTTSCSSCCH
T ss_pred             HHHHHHHHcCCCCCCCCCCCCCHH-HHHHHhChHHHHHHH-HHcCCch--hhhcCcccCcccccccccccccchhhhhcc
Confidence            999999999999999999999999 99999999   9999 9999988  55            6678899999999998


Q ss_pred             hhH
Q psy15068        698 YSF  700 (710)
Q Consensus       698 ~~~  700 (710)
                      +.+
T Consensus       301 ~~~  303 (364)
T 3ljn_A          301 SKQ  303 (364)
T ss_dssp             HHH
T ss_pred             CHH
Confidence            754

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=100.00  E-value=5.1e-39  Score=312.13  Aligned_cols=264  Identities=18%  Similarity=0.119  Sum_probs=189.2

Q ss_pred             CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC---CCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHC
Q psy15068        371 INAEGDDMITPLLFAAKHCDLQSAKYLIQKGAN---VNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLH  447 (710)
Q Consensus       371 ~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~  447 (710)
                      ++.++..|.||||+|+..|+.+++++|++.|++   ++..+..             |.||||+|+.. ++.+++++|+++
T Consensus         2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~-------------g~t~L~~A~~~-g~~~~v~~Ll~~   67 (282)
T 1oy3_D            2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDL-------------GQTALHLAAIL-GEASTVEKLYAA   67 (282)
T ss_dssp             CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTT-------------SCCHHHHHHHH-TCHHHHHHHHHT
T ss_pred             CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCC-------------CCCHHHHHHHc-CCHHHHHHHHHc
Confidence            467889999999999999999999999999988   5555555             99999999999 999999999999


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhh
Q psy15068        448 GADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVR  527 (710)
Q Consensus       448 ~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~  527 (710)
                      |++++.. +..|.||||+|+..|+.+++++|+++|++.....  ......    ......      ..............
T Consensus        68 ga~~~~~-~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~--~~~~~~----~~~~~~------~~~~~~~~~~~~~~  134 (282)
T 1oy3_D           68 GAGVLVA-ERGGHTALHLACRVRAHTCACVLLQPRPSHPRDA--SDTYLT----QSQDCT------PDTSHAPAAVDSQP  134 (282)
T ss_dssp             TCCSSCC-CTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC--------------------------------------
T ss_pred             CCCCCCC-CCCCCCHHHHHHHcCCcchhHhhhccCCCCchhh--HHHHhh----cccccC------cchhcchhhhcccc
Confidence            9999988 8999999999999999999999999998754322  111000    000000      00000000000122


Q ss_pred             cCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-CCcHHHHHHhcCCchHHHHHHHH
Q psy15068        528 SNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSAT-GFTALHMACRFHSNDNIVRKLLH  606 (710)
Q Consensus       528 ~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~~v~~Ll~  606 (710)
                      .........+...+.+++..+..|.||||+|+..|+.+++++|+++|++++..+.. |+||||+|+.. ++.+++++|++
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~-~~~~~v~~Ll~  213 (282)
T 1oy3_D          135 NPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEA-QAASVLELLLK  213 (282)
T ss_dssp             ---------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT-TCHHHHHHHHH
T ss_pred             ccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHc-CCHHHHHHHHH
Confidence            22334445555567778888888888888888888888888888888888888754 88888888888 88888888888


Q ss_pred             cCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhh
Q psy15068        607 HGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMN  664 (710)
Q Consensus       607 ~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~  664 (710)
                      +|++++.++ ..|.||||+|+..|+.+++++|+++|++++.+|..|.||| ++|....
T Consensus       214 ~gad~~~~d-~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl-~~a~~~~  269 (282)
T 1oy3_D          214 AGADPTARM-YGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPC-SSSGSDS  269 (282)
T ss_dssp             TTCCTTCCC-TTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC---------------
T ss_pred             cCCCCcccc-cCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccc-cccCCcc
Confidence            888888888 8888888888888888888888888888888888888888 8877543

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=100.00  E-value=8.3e-39  Score=303.70  Aligned_cols=229  Identities=21%  Similarity=0.236  Sum_probs=141.4

Q ss_pred             cCCCccccchhHHHHHHhcC-------------CHHHHHHHHhcCCCCCc-cccCCCCcHHHHHHHcCcHHHHHHHHHcC
Q psy15068         48 NSSSAKSVELTLLCSAVWDN-------------KIREVEFLLSTGDHDVN-EKLQDGRTALYMAILQGLYKMVTLLIHHG  113 (710)
Q Consensus        48 ~~~~~~~~~~t~L~~A~~~g-------------~~~~v~~Ll~~~~~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g  113 (710)
                      ++|.+|.+|.||||.|+..|             +.+++++|++.|+ +++ ..+..|+||||+|+..|+.+++++|++.|
T Consensus         2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~-~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g   80 (253)
T 1yyh_A            2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGA-SLHNQTDRTGETALHLAARYSRSDAAKRLLEAS   80 (253)
T ss_dssp             ---------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred             CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccC-CcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence            57778888888888888876             7888888888888 554 45778888888888888888888888888


Q ss_pred             CCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCC-CccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCC
Q psy15068        114 ANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKA-DVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKM  192 (710)
Q Consensus       114 ~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~-~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~  192 (710)
                      ++++..|..|.||||+|+..|+.+++++|+++|+ +++..+..|.|||++|+..+      +.+++++|+++|++++..+
T Consensus        81 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~------~~~~v~~Ll~~g~~~~~~d  154 (253)
T 1yyh_A           81 ADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLA------VEGMLEDLINSHADVNAVD  154 (253)
T ss_dssp             CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHT------CSSHHHHHHHTTCCTTCBC
T ss_pred             CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcC------hHHHHHHHHHcCCCCCCcC
Confidence            8888888888888888888888888888888876 77777777777777777777      7777777777777777666


Q ss_pred             CCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHH
Q psy15068        193 PFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKAC  272 (710)
Q Consensus       193 ~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~  272 (710)
                      . .|.||||.|+..|+.+++++|+++|++++..+..+.+| |+.|+..|+.++++ +|.+.|++++..+..|.|||++|+
T Consensus       155 ~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tp-L~~A~~~~~~~~v~-~Ll~~ga~~~~~d~~g~tpl~~A~  231 (253)
T 1yyh_A          155 D-LGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETP-LFLAAREGSYETAK-VLLDHFANRDITDHMDRLPRDIAQ  231 (253)
T ss_dssp             T-TSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCH-HHHHHHHTCHHHHH-HHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred             C-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH-HHHHHHCCCHHHHH-HHHHcCCCccccccCCCCHHHHHH
Confidence            5 67777777777777777777777777766666656555 66666666666666 555556666666666666666666


Q ss_pred             HcCCHHHHHHHHHc
Q psy15068        273 HVGNLQIVQMLVKR  286 (710)
Q Consensus       273 ~~~~~~~v~~Ll~~  286 (710)
                      ..|+.+++++|.+.
T Consensus       232 ~~g~~~i~~~l~~~  245 (253)
T 1yyh_A          232 ERMHHDIVRLLDLE  245 (253)
T ss_dssp             HTTCHHHHHHHHC-
T ss_pred             HcCCHHHHHHHHHH
Confidence            66666666666544

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=100.00  E-value=1.3e-38  Score=302.48  Aligned_cols=219  Identities=23%  Similarity=0.226  Sum_probs=115.9

Q ss_pred             CCCCCCCCCCcHHHHHHHcC-------------CHHHHHHHHHcCCCCCch-hhhhhhhhccccCccccCCHHHHHHHcc
Q psy15068        370 NINAEGDDMITPLLFAAKHC-------------DLQSAKYLIQKGANVNLT-ETQKAFISDARSSDFCFRSALQYACKHK  435 (710)
Q Consensus       370 ~~~~~~~~~~t~L~~A~~~~-------------~~~~~~~Ll~~g~~~~~~-~~~~~~~~~~~~~~~~~~t~l~~A~~~~  435 (710)
                      ++|.++..|.||||+|+..|             +.+++++|++.|++++.. +..             |.||||+|+.. 
T Consensus         2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~-------------g~t~L~~A~~~-   67 (253)
T 1yyh_A            2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRT-------------GETALHLAARY-   67 (253)
T ss_dssp             --------------------------------------------------CCCTT-------------SCCHHHHHHHT-
T ss_pred             CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCC-------------CCcHHHHHHHc-
Confidence            67889999999999999977             677777777777766532 333             77777777777 


Q ss_pred             CcHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCC-CCCchhhccchHHHHhhhhhhhHHHHHhhhH
Q psy15068        436 NNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGA-QIDKENYLKNKEAARIAHSTTELEERKKIND  514 (710)
Q Consensus       436 ~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~  514 (710)
                      ++.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++++. +++                            
T Consensus        68 g~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~----------------------------  118 (253)
T 1yyh_A           68 SRSDAAKRLLEASADANIQ-DNMGRTPLHAAVSADAQGVFQILIRNRATDLD----------------------------  118 (253)
T ss_dssp             TCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTT----------------------------
T ss_pred             CCHHHHHHHHHcCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc----------------------------
Confidence            7777777777777777766 6777777777777777777777777664 444                            


Q ss_pred             HHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhc
Q psy15068        515 LLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRF  594 (710)
Q Consensus       515 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~  594 (710)
                                                     ..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus       119 -------------------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~  167 (253)
T 1yyh_A          119 -------------------------------ARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAV  167 (253)
T ss_dssp             -------------------------------CCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHH
T ss_pred             -------------------------------ccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence                                           4445555666666666666666666666666666665666666666665


Q ss_pred             CCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh
Q psy15068        595 HSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS  665 (710)
Q Consensus       595 ~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~  665 (710)
                       ++.+++++|+++|++++.++ ..|.||||+|+..|+.+++++|+++|++++.+|..|+||| |+|+.+|+
T Consensus       168 -~~~~~v~~Ll~~ga~~~~~~-~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl-~~A~~~g~  235 (253)
T 1yyh_A          168 -NNVDAAVVLLKNGANKDMQN-NREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPR-DIAQERMH  235 (253)
T ss_dssp             -TCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHH-HHHHHTTC
T ss_pred             -CCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHH-HHHHHcCC
Confidence             56666666666666666555 5566666666666666666666666666666666666666 66666655

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=100.00  E-value=2e-37  Score=292.05  Aligned_cols=228  Identities=22%  Similarity=0.308  Sum_probs=175.6

Q ss_pred             ccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCH
Q psy15068         47 INSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTP  126 (710)
Q Consensus        47 ~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~  126 (710)
                      .+++..|..|.||||.|+..|+.+++++|+++|+ +++..+..|+||||+|+..|+.+++++|++.|++++..+..|.||
T Consensus         2 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~   80 (237)
T 3b7b_A            2 MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGA-NIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTC   80 (237)
T ss_dssp             CCCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCH
T ss_pred             CCcccccCCCCCHHHHHHHcCcHHHHHHHHHcCC-CcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcH
Confidence            4667778888888888888888888888888888 888888888888888888888888888888888888888888888


Q ss_pred             HHHHHhcCCHHHHHHHHhCC-CCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHH
Q psy15068        127 LHLACYLGNKNIVKFLLSKK-ADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVV  205 (710)
Q Consensus       127 L~~A~~~g~~~iv~~Ll~~g-~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~  205 (710)
                      ||+|+..|+.+++++|+++| .+++..+..|.|||++|+..+      +.+++++|+++|++++..+. .|.||||.|+.
T Consensus        81 L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~------~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~  153 (237)
T 3b7b_A           81 LHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYK------HVDLVKLLLSKGSDINIRDN-EENICLHWAAF  153 (237)
T ss_dssp             HHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHH
T ss_pred             HHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcC------CHHHHHHHHHCCCCCCccCC-CCCCHHHHHHH
Confidence            88888888888888888887 777777777777777777777      77777777777777776666 77777777777


Q ss_pred             hCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy15068        206 KKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLV  284 (710)
Q Consensus       206 ~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll  284 (710)
                      .|+.+++++|++.|++++..+..+.+| |+.|+..++.++++ +|.+.|++++..+..|.|||++|+..++...+..|+
T Consensus       154 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~-L~~A~~~~~~~~v~-~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~  230 (237)
T 3b7b_A          154 SGCVDIAEILLAAKCDLHAVNIHGDSP-LHIAARENRYDCVV-LFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMS  230 (237)
T ss_dssp             HCCHHHHHHHHTTTCCTTCCCTTCCCH-HHHHHHTTCHHHHH-HHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHH
T ss_pred             CCCHHHHHHHHHcCCCCCCcCCCCCCH-HHHHHHhCCHhHHH-HHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            777777777777777776666666666 66666666666666 555666666666666666666666666665444443

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=100.00  E-value=4.9e-38  Score=297.25  Aligned_cols=229  Identities=25%  Similarity=0.264  Sum_probs=168.4

Q ss_pred             CCccccchhHHHHHHhcCCHHHHHHHHh----cCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCC
Q psy15068         50 SSAKSVELTLLCSAVWDNKIREVEFLLS----TGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYT  125 (710)
Q Consensus        50 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~----~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t  125 (710)
                      +.+|.+|.||||.|+..|+.+++++|++    .+. +++.++..|+||||+|+..|+.+++++|++.|++++..+..|.|
T Consensus         3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t   81 (241)
T 1k1a_A            3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGR-ELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQT   81 (241)
T ss_dssp             ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTC-CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCC-CCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC
Confidence            4567788888888888888888888886    566 88888888888888888888888888888888888888888888


Q ss_pred             HHHHHHhcCCHHHHHHHHhCCC----CccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHH
Q psy15068        126 PLHLACYLGNKNIVKFLLSKKA----DVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLH  201 (710)
Q Consensus       126 ~L~~A~~~g~~~iv~~Ll~~g~----~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~  201 (710)
                      |||+|+..|+.+++++|+++++    +++..+..|.|||++|+..+      +.+++++|+++|++++..+...|.||||
T Consensus        82 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~------~~~~~~~Ll~~g~~~~~~~~~~g~t~L~  155 (241)
T 1k1a_A           82 AAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE------CQETVQLLLERGADIDAVDIKSGRSPLI  155 (241)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHT------CHHHHHHHHHTTCCTTCCCTTTCCCHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcC------CHHHHHHHHHcCCCcccccccCCCcHHH
Confidence            8888888888888888888876    66777777777777777777      7777777777777777666336777777


Q ss_pred             HHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHH
Q psy15068        202 FAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQ  281 (710)
Q Consensus       202 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~  281 (710)
                      .|+..|+.+++++|+++|++++..+..+.+| ||+|+..|+.++++ +|.+.|++++..+..|.|||++|+..|+.++++
T Consensus       156 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~-L~~A~~~~~~~~v~-~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~  233 (241)
T 1k1a_A          156 HAVENNSLSMVQLLLQHGANVNAQMYSGSSA-LHSASGRGLLPLVR-TLVRSGADSSLKNCHNDTPLMVARSRRVIDILR  233 (241)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCTTCBCTTSCBH-HHHHHHHTCHHHHH-HHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHT
T ss_pred             HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH-HHHHHHcCCHHHHH-HHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHh
Confidence            7777777777777777777776666666666 66666666666666 555666666666666666666666666666666


Q ss_pred             HHHHcC
Q psy15068        282 MLVKRK  287 (710)
Q Consensus       282 ~Ll~~g  287 (710)
                      .|.+++
T Consensus       234 ~l~~~~  239 (241)
T 1k1a_A          234 GKATRP  239 (241)
T ss_dssp             C-----
T ss_pred             hhccCC
Confidence            666554

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.6e-38  Score=302.08  Aligned_cols=226  Identities=20%  Similarity=0.248  Sum_probs=178.1

Q ss_pred             CccccCCHHHHHHHccCcHHHHHHHHHCCCCC--------CCCCCCCCCCHHHHHHHcCCH-hHHHHHHHcCCCCCchhh
Q psy15068        420 SDFCFRSALQYACKHKNNIEMVKLLLLHGADV--------NDTSNKPKQKPLAVAIQSGDF-QIVKELQNYGAQIDKENY  490 (710)
Q Consensus       420 ~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~--------~~~~~~~~~t~L~~A~~~~~~-~~v~~Ll~~~~~~~~~~~  490 (710)
                      .|+.+.+||+.|+.. |+.++|++|++.|.+.        +.. +..+.|||+.|+..+.. .++++|++.|++++..+ 
T Consensus         7 kd~~~~~~L~~A~~~-G~~~~v~~LL~~~~~~~~~~~~~~~~~-~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d-   83 (269)
T 4b93_B            7 KDYREVEKLLRAVAD-GDLEMVRYLLEWTEEDLEDAEDTVSAA-DPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTS-   83 (269)
T ss_dssp             CCCHHHHHHHHHHHT-TCHHHHHHHHTCC-----------------------------------------CCCCTTCCC-
T ss_pred             cCccchhHHHHHHHc-CCHHHHHHHHHCCCccccccccccccc-CccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcC-
Confidence            445578999999999 9999999999998763        233 66789999999988765 58899999999999999 


Q ss_pred             ccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHH
Q psy15068        491 LKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLL  570 (710)
Q Consensus       491 ~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L  570 (710)
                       ..|.||  +|.|                      +..++.+++++|++.|++++..+..|.||+|.|+..++.+++++|
T Consensus        84 -~~G~Tp--Lh~A----------------------~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~L  138 (269)
T 4b93_B           84 -QDGSSP--LHVA----------------------ALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCL  138 (269)
T ss_dssp             -TTSCCH--HHHH----------------------HHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred             -CCCCCH--HHHH----------------------HHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHH
Confidence             999999  9999                      999999999999999999999999999999999999999999999


Q ss_pred             HHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCC
Q psy15068        571 LDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTN  650 (710)
Q Consensus       571 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~  650 (710)
                      +++|++++.+|..|+||||+|+.. |+.++|++|+++|++++.++ ..|.||||+|+..|+.++|++|+++|+|+|.+|.
T Consensus       139 l~~g~~~n~~d~~g~TpL~~A~~~-g~~~~v~~Ll~~gadvn~~~-~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~  216 (269)
T 4b93_B          139 LDSNAKPNKKDLSGNTPLIYACSG-GHHELVALLLQHGASINASN-NKGNTALHEAVIEKHVFVVELLLLHGASVQVLNK  216 (269)
T ss_dssp             HHTTCCSCCCCTTCCCHHHHHHHT-TCGGGHHHHHHTTCCTTCBC-TTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCT
T ss_pred             HHCCCCCCCCCCCCCCHHHHHHHC-CCHHHHHHHHHCCCCCCccc-cCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence            999999999999999999999999 99999999999999999999 9999999999999999999999999999999999


Q ss_pred             CCCCchhhHHHHhhh----cccccceeehhH
Q psy15068        651 PYDPNVYHRIELMNS----AKQLGLVHVFEI  677 (710)
Q Consensus       651 ~g~t~L~~~A~~~~~----~~~L~~~~g~~~  677 (710)
                      .|+||| |+|+.+++    ++.| .+.++++
T Consensus       217 ~G~TpL-~~A~~~~~i~~lL~~l-~~~~~~~  245 (269)
T 4b93_B          217 RQRTAV-DCAEQNSKIMELLQVV-PSCVASL  245 (269)
T ss_dssp             TSCCSG-GGSCTTCHHHHHTTC---------
T ss_pred             CCCCHH-HHHHhCCcHHHHHHHH-HHhchhh
Confidence            999999 99998888    3444 4445444

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=100.00  E-value=1e-37  Score=295.06  Aligned_cols=223  Identities=20%  Similarity=0.176  Sum_probs=156.4

Q ss_pred             CccccCCHHHHHHHccCcHHHHHHHHH----CCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchH
Q psy15068        420 SDFCFRSALQYACKHKNNIEMVKLLLL----HGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE  495 (710)
Q Consensus       420 ~~~~~~t~l~~A~~~~~~~~~~~~Ll~----~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~  495 (710)
                      .|..|.||||+|+.. |+.+++++|++    .+.+++.. +..|.||||+|+..|+.+++++|+++|++++..+  ..+.
T Consensus         5 ~d~~g~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~g~   80 (241)
T 1k1a_A            5 ADEDGDTPLHIAVVQ-GNLPAVHRLVNLFQQGGRELDIY-NNLRQTPLHLAVITTLPSVVRLLVTAGASPMALD--RHGQ   80 (241)
T ss_dssp             --CTTCCHHHHHHHT-TCHHHHHHHHHHHHHTTCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC--TTSC
T ss_pred             cCCCCCcHHHHHHHc-CCHHHHHHHHHHHHhcCCCCCcc-cccCCCHHHHHHHcCCHHHHHHHHHcCCCccccC--CCCC
Confidence            455589999999999 99999998887    78888887 8889999999999999999999999888877666  5666


Q ss_pred             HHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCC----cccccCCCCCcHHHHHHHcCCHHHHHHHH
Q psy15068        496 AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGA----CVNVSSERRGSALIYVAWKGYEEIVDLLL  571 (710)
Q Consensus       496 ~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll  571 (710)
                      +|  +|.|                      +..++.+++++|++.+.    +++..+..|.||||+|+..|+.+++++|+
T Consensus        81 t~--l~~A----------------------~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll  136 (241)
T 1k1a_A           81 TA--AHLA----------------------CEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLL  136 (241)
T ss_dssp             CH--HHHH----------------------HHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred             CH--HHHH----------------------HHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHH
Confidence            66  6666                      66666666666666655    55666666666666666666666666666


Q ss_pred             HcCCCCcccC-CCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCC
Q psy15068        572 DNGADVNFKS-ATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTN  650 (710)
Q Consensus       572 ~~g~~~~~~~-~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~  650 (710)
                      ++|++++..+ ..|.||||+|+.. ++.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++++.+|.
T Consensus       137 ~~g~~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~  214 (241)
T 1k1a_A          137 ERGADIDAVDIKSGRSPLIHAVEN-NSLSMVQLLLQHGANVNAQM-YSGSSALHSASGRGLLPLVRTLVRSGADSSLKNC  214 (241)
T ss_dssp             HTTCCTTCCCTTTCCCHHHHHHHT-TCHHHHHHHHHTTCCTTCBC-TTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred             HcCCCcccccccCCCcHHHHHHHc-CCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCC
Confidence            6666666666 5666666666666 66666666666666666666 6666666666666666666666666666666666


Q ss_pred             CCCCchhhHHHHhhh---cccccceee
Q psy15068        651 PYDPNVYHRIELMNS---AKQLGLVHV  674 (710)
Q Consensus       651 ~g~t~L~~~A~~~~~---~~~L~~~~g  674 (710)
                      .|+||| |+|+..|+   ++.| .+.+
T Consensus       215 ~g~tpl-~~A~~~~~~~i~~~l-~~~~  239 (241)
T 1k1a_A          215 HNDTPL-MVARSRRVIDILRGK-ATRP  239 (241)
T ss_dssp             TSCCTT-TTCSSHHHHHHHTC------
T ss_pred             CCCCHH-HHHHhcCcHHHHhhh-ccCC
Confidence            666666 66666666   5555 4444

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=100.00  E-value=7.8e-38  Score=303.78  Aligned_cols=253  Identities=22%  Similarity=0.172  Sum_probs=196.9

Q ss_pred             CCCccccchhHHHHHHhcCCHHHHHHHHhcCCCC---CccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCC
Q psy15068         49 SSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHD---VNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYT  125 (710)
Q Consensus        49 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~---~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t  125 (710)
                      ++..|..|+||||.|+..|+.++|++|++.++ +   ++.++..|+||||+|+..|+.+++++|+++|++++.++..|.|
T Consensus         2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t   80 (282)
T 1oy3_D            2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSA-GHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHT   80 (282)
T ss_dssp             CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHT-TSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCC
T ss_pred             CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCC-CcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Confidence            35678899999999999999999999999988 6   7888999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCHHHHHHHHhCCCCcccc-------------ccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCC
Q psy15068        126 PLHLACYLGNKNIVKFLLSKKADVRAK-------------CSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKM  192 (710)
Q Consensus       126 ~L~~A~~~g~~~iv~~Ll~~g~~~~~~-------------~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~  192 (710)
                      |||+|+..|+.+++++|+++|++....             ...+.++++.+.....     .......+...+.+++..+
T Consensus        81 pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~  155 (282)
T 1oy3_D           81 ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNP-----ENEEEPRDEDWRLQLEAEN  155 (282)
T ss_dssp             HHHHHTTTTCHHHHHHHSSSCCSSCCCC----------------------------------------CCCGGGGTTCCC
T ss_pred             HHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhcccccc-----chhhhhhhhhhhhcCCCcC
Confidence            999999999999999999998774322             1223444444443331     2233444555667777777


Q ss_pred             CCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhcc-CCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHH
Q psy15068        193 PFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKV-NQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKA  271 (710)
Q Consensus       193 ~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A  271 (710)
                      . .|.||||.|+..|+.+++++|+++|++++..+.. +.+| ||+|+..|+.++++ +|++.|++++..+..|.||||+|
T Consensus       156 ~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tp-L~~A~~~~~~~~v~-~Ll~~gad~~~~d~~g~tpL~~A  232 (282)
T 1oy3_D          156 Y-DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP-LHLAVEAQAASVLE-LLLKAGADPTARMYGGRTPLGSA  232 (282)
T ss_dssp             T-TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCH-HHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             C-CCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCH-HHHHHHcCCHHHHH-HHHHcCCCCcccccCCCCHHHHH
Confidence            7 9999999999999999999999999999988865 7777 99999999999999 88888999999999999999999


Q ss_pred             HHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCC
Q psy15068        272 CHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRK  310 (710)
Q Consensus       272 ~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~  310 (710)
                      +..|+.+++++|+++|++++..+..|.||+++|......
T Consensus       233 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~~  271 (282)
T 1oy3_D          233 LLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDS  271 (282)
T ss_dssp             HTSSCHHHHHHHHHTTCCCCCCC----------------
T ss_pred             HHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCcccc
Confidence            999999999999999999999999999999999876543

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=100.00  E-value=4.8e-37  Score=289.39  Aligned_cols=220  Identities=24%  Similarity=0.300  Sum_probs=191.1

Q ss_pred             CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCC
Q psy15068        369 ENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHG  448 (710)
Q Consensus       369 ~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~  448 (710)
                      .+++.++..|.||||+|+..|+.+++++|+++|++++..+..             |.||||+|+.. ++.+++++|+++|
T Consensus         2 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-------------g~t~L~~A~~~-~~~~~v~~Ll~~g   67 (237)
T 3b7b_A            2 MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSED-------------QRTPLMEAAEN-NHLEAVKYLIKAG   67 (237)
T ss_dssp             CCCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-------------CCCHHHHHHHT-TCHHHHHHHHTTT
T ss_pred             CCcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCC-------------CCCHHHHHHHh-CCHHHHHHHHhCC
Confidence            356777888889999999989999999999888888877766             88899988888 8888899888888


Q ss_pred             CCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcC-CCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhh
Q psy15068        449 ADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYG-AQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVR  527 (710)
Q Consensus       449 ~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~  527 (710)
                      ++++.. +..|.|||++|+..|+.+++++|++.| .+                                           
T Consensus        68 ~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~-------------------------------------------  103 (237)
T 3b7b_A           68 ALVDPK-DAEGSTCLHLAAKKGHYEVVQYLLSNGQMD-------------------------------------------  103 (237)
T ss_dssp             CCCCCC-CTTSCCHHHHHHHTTCHHHHHHHHTTTCCC-------------------------------------------
T ss_pred             CCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-------------------------------------------
Confidence            888877 788888888888888888888888766 33                                           


Q ss_pred             cCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHc
Q psy15068        528 SNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHH  607 (710)
Q Consensus       528 ~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~  607 (710)
                                      ++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+.. |+.+++++|+++
T Consensus       104 ----------------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~  166 (237)
T 3b7b_A          104 ----------------VNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFS-GCVDIAEILLAA  166 (237)
T ss_dssp             ----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH-CCHHHHHHHHTT
T ss_pred             ----------------cccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHC-CCHHHHHHHHHc
Confidence                            345567788999999999999999999999999999999999999999998 899999999999


Q ss_pred             CCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh
Q psy15068        608 GAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS  665 (710)
Q Consensus       608 g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~  665 (710)
                      |++++..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|+||| |+|+.+++
T Consensus       167 g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l-~~A~~~~~  222 (237)
T 3b7b_A          167 KCDLHAVN-IHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPL-QCASLNSQ  222 (237)
T ss_dssp             TCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHH-HHSCTTCH
T ss_pred             CCCCCCcC-CCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHH-HHHHHHHH
Confidence            99999888 8899999999999999999999999999999999999999 99998887

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=100.00  E-value=4.9e-38  Score=303.06  Aligned_cols=242  Identities=17%  Similarity=0.188  Sum_probs=222.0

Q ss_pred             hcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHH
Q psy15068         32 MFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIH  111 (710)
Q Consensus        32 ~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~  111 (710)
                      ..+..++.++|.+.  +++.+|..|.||||+|+..|+.++|++|++.|+ +++..+  |+||||+|+..|+.+++++|++
T Consensus         9 ~~~~~~v~~lL~~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~   83 (285)
T 3kea_A            9 TWKSKQLKSFLSSK--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGA-LKNLLE--NEFPLHQAATLEDTKIVKILLF   83 (285)
T ss_dssp             GCCHHHHHHHHHST--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTG-GGSCCT--TCCHHHHHTTSSSCHHHHHHHH
T ss_pred             hcCHHHHHHHHHhC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCC-CCCCCC--CCCHHHHHHHcCCHHHHHHHHH
Confidence            44566677777665  588999999999999999999999999999999 888874  9999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCC-CchhHHhhhccCCCCCCHHHHHHHHHHcCCCccc
Q psy15068        112 HGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMM-VTPILAVSANMSEDSTDTNEIISMLIENGANVRE  190 (710)
Q Consensus       112 ~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~-~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~  190 (710)
                      +|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..| .||||+|+..+      +.+++++|+++|++...
T Consensus        84 ~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~------~~~~v~~Ll~~g~~~~~  157 (285)
T 3kea_A           84 SGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLN------DVSIVSYFLSEIPSTFD  157 (285)
T ss_dssp             TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTT------CHHHHHHHHTTSCTTCC
T ss_pred             CCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcC------CHHHHHHHHhCCCcccc
Confidence            999999999999999999999999999999999999999999999 89999999999      99999999999988743


Q ss_pred             CCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHH
Q psy15068        191 KMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHK  270 (710)
Q Consensus       191 ~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~  270 (710)
                      .  ..|.||||.|+..|+.+++++|+++|++++..+..+.+|+|++|+..++.++++ +|.+.|++++..+.       .
T Consensus       158 ~--~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~-~Ll~~gad~~~~~~-------~  227 (285)
T 3kea_A          158 L--AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQ-ALFKYDINIYSANL-------E  227 (285)
T ss_dssp             C--STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHH-HHTTSCBCSTTTTG-------G
T ss_pred             c--cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHH-HHHHcCCCCCCCCh-------h
Confidence            3  278899999999999999999999999999999999998899999999999999 88899999998873       5


Q ss_pred             HHHcCCHHHHHHHHHcCCCCCCCc
Q psy15068        271 ACHVGNLQIVQMLVKRKFDINAQN  294 (710)
Q Consensus       271 A~~~~~~~~v~~Ll~~g~~~~~~~  294 (710)
                      |+..|+.+++++|+++|+++....
T Consensus       228 a~~~~~~~iv~~Ll~~g~~~~~~~  251 (285)
T 3kea_A          228 NVLLDDAEIAKMIIEKHVEYKSDS  251 (285)
T ss_dssp             GGTTTCHHHHHHHHHHHHHHTTCT
T ss_pred             hhhcCCHHHHHHHHHcCCCCCCcc
Confidence            678999999999999998876543

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=100.00  E-value=2.7e-37  Score=289.83  Aligned_cols=225  Identities=29%  Similarity=0.383  Sum_probs=159.6

Q ss_pred             chhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCC
Q psy15068         56 ELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGN  135 (710)
Q Consensus        56 ~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~  135 (710)
                      +.||||.|+..|+.+.+++|++.++..++..+..|+||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+
T Consensus         6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~   85 (231)
T 3aji_A            6 SNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGX   85 (231)
T ss_dssp             SSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTC
T ss_pred             ccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCH
Confidence            55677777777777777777766653456666677777777777777777777777777777777777777777777777


Q ss_pred             HHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHH
Q psy15068        136 KNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELL  215 (710)
Q Consensus       136 ~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~L  215 (710)
                      .+++++|+++|++++..+..|.|||++|+..+      +.+++++|+++|++++..+. .|.||||.|+..|+.+++++|
T Consensus        86 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~L  158 (231)
T 3aji_A           86 DEIVKALLVKGAHVNAVNQNGCTPLHYAASKN------RHEIAVMLLEGGANPDAKDH-YDATAMHRAAAKGNLKMVHIL  158 (231)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC------CHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHcCCHHHHHHH
Confidence            77777777777777766666777777777666      66677777777666666655 677777777777777777777


Q ss_pred             HhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy15068        216 IKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFD  289 (710)
Q Consensus       216 l~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~  289 (710)
                      ++.|++++..+..+.+| |++|+..++.++++ +|.+.|++++..+..|.|||++|+..++.+++++|+++|++
T Consensus       159 l~~g~~~~~~~~~g~t~-L~~A~~~~~~~~v~-~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~  230 (231)
T 3aji_A          159 LFYKASTNIQDTEGNTP-LHLACDEERVEEAK-FLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEAS  230 (231)
T ss_dssp             HHTTCCSCCCCTTSCCH-HHHHHHTTCHHHHH-HHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred             HhcCCCccccCCCCCCH-HHHHHHCCCHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence            77777777666666666 77777777777777 55566777777777777777777777777777777776654

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=100.00  E-value=4.9e-38  Score=298.82  Aligned_cols=237  Identities=24%  Similarity=0.271  Sum_probs=178.9

Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCCCCC
Q psy15068        374 EGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVND  453 (710)
Q Consensus       374 ~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~  453 (710)
                      +|..+.++|+.|+..|+.+++++|++.|.+.......     .....+..+.|||+.|+.......++++|++.|++++.
T Consensus         7 kd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~-----~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~   81 (269)
T 4b93_B            7 KDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAED-----TVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNV   81 (269)
T ss_dssp             CCCHHHHHHHHHHHTTCHHHHHHHHTCC---------------------------------------------CCCCTTC
T ss_pred             cCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccc-----cccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCC
Confidence            4556679999999999999999999998764321111     12233445899999999873445689999999999998


Q ss_pred             CCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHH
Q psy15068        454 TSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDE  533 (710)
Q Consensus       454 ~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  533 (710)
                      . +..|+||||+|+..|+.+++++|++.|++++..+  ..+.+|  ++.+                      +..+..++
T Consensus        82 ~-d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~--~~g~t~--l~~a----------------------~~~~~~~~  134 (269)
T 4b93_B           82 T-SQDGSSPLHVAALHGRADLIPLLLKHGANAGARN--ADQAVP--LHLA----------------------CQQGHFQV  134 (269)
T ss_dssp             C-CTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCC--TTCCCH--HHHH----------------------HHHTCHHH
T ss_pred             c-CCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccC--CCCCCc--cccc----------------------cccChHHH
Confidence            8 9999999999999999999999999999999988  899999  9999                      88999999


Q ss_pred             HHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCC
Q psy15068        534 VKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDM  613 (710)
Q Consensus       534 ~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~  613 (710)
                      +++|++.|++++.++..|.||||+|+..|+.+++++|+++|+++|.++..|+||||+|+.. |+.++|++|+++|++++.
T Consensus       135 ~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~-g~~~~v~~Ll~~Gad~~~  213 (269)
T 4b93_B          135 VKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIE-KHVFVVELLLLHGASVQV  213 (269)
T ss_dssp             HHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHT-TCHHHHHHHHHTTCCSCC
T ss_pred             HHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHc-CCHHHHHHHHHCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999 999999999999999999


Q ss_pred             CCCCCCCCHhHHHHhCCC-hhHHHHHHhhhhc
Q psy15068        614 KDGKTGKTPLKHAEAGKN-RDIIDLLHLIDNL  644 (710)
Q Consensus       614 ~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~  644 (710)
                      ++ ..|+||||+|+++++ .+++++|.+.++.
T Consensus       214 ~d-~~G~TpL~~A~~~~~i~~lL~~l~~~~~~  244 (269)
T 4b93_B          214 LN-KRQRTAVDCAEQNSKIMELLQVVPSCVAS  244 (269)
T ss_dssp             CC-TTSCCSGGGSCTTCHHHHHTTC-------
T ss_pred             cC-CCCCCHHHHHHhCCcHHHHHHHHHHhchh
Confidence            99 999999999988764 2333444444443

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=100.00  E-value=1.8e-37  Score=290.96  Aligned_cols=222  Identities=19%  Similarity=0.181  Sum_probs=186.6

Q ss_pred             cCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhh
Q psy15068        424 FRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHST  503 (710)
Q Consensus       424 ~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a  503 (710)
                      +.+||+.|+.. |+.+.++.|++.+.......+..|.||||+|+..|+.+++++|+++|++++..+  ..+.+|  +|.|
T Consensus         6 ~~~~l~~A~~~-g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--~~g~t~--L~~A   80 (231)
T 3aji_A            6 SNIMICNLAYS-GKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKD--DAGWSP--LHIA   80 (231)
T ss_dssp             SSSHHHHHHHH-TCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC--TTSCCH--HHHH
T ss_pred             ccchHHHHHHh-CCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcC--CCCCCH--HHHH
Confidence            78999999999 999999999998766444448899999999999999999999999999988877  777888  8888


Q ss_pred             hhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCC
Q psy15068        504 TELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSAT  583 (710)
Q Consensus       504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~  583 (710)
                                            +..++.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++.++..
T Consensus        81 ----------------------~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~  138 (231)
T 3aji_A           81 ----------------------ASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHY  138 (231)
T ss_dssp             ----------------------HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred             ----------------------HHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence                                  7778888888888888888888888888888888888888888888888888888888


Q ss_pred             CCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHh
Q psy15068        584 GFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELM  663 (710)
Q Consensus       584 g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~  663 (710)
                      |.||||+|+.. ++.+++++|+++|++++.++ ..|.||||+|+..|+.+++++|+++|++++.+|..|.||| |+|+..
T Consensus       139 g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l-~~A~~~  215 (231)
T 3aji_A          139 DATAMHRAAAK-GNLKMVHILLFYKASTNIQD-TEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPL-QVAKGG  215 (231)
T ss_dssp             SCCHHHHHHHH-TCHHHHHHHHHTTCCSCCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHH-HHSCHH
T ss_pred             CCcHHHHHHHc-CCHHHHHHHHhcCCCccccC-CCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHH-HHHHhh
Confidence            88888888887 88888888888888888887 7888888888888888888888888888888888888888 888777


Q ss_pred             hh---cccccceeehh
Q psy15068        664 NS---AKQLGLVHVFE  676 (710)
Q Consensus       664 ~~---~~~L~~~~g~~  676 (710)
                      ++   +++| .++|++
T Consensus       216 ~~~~i~~lL-~~~~a~  230 (231)
T 3aji_A          216 LGLILKRLA-EGEEAS  230 (231)
T ss_dssp             HHHHHHHHH-HHHHHC
T ss_pred             HHHHHHHHH-cccccc
Confidence            76   6777 777665

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=100.00  E-value=9.8e-37  Score=285.48  Aligned_cols=212  Identities=19%  Similarity=0.159  Sum_probs=148.3

Q ss_pred             cCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhh
Q psy15068        424 FRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHST  503 (710)
Q Consensus       424 ~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a  503 (710)
                      |.||||.|+.. ++.+++++|++.+.+.....+..|.||||+|+..|+.+++++|+++|++++...              
T Consensus         2 g~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~--------------   66 (228)
T 2dzn_A            2 SNYPLHQACME-NEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDD--------------   66 (228)
T ss_dssp             -CCHHHHHHHT-TCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGG--------------
T ss_pred             CccHHHHHHHh-CCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccc--------------
Confidence            78999999999 999999999999988877558999999999999999999999999996554321              


Q ss_pred             hhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC--CCCcccC
Q psy15068        504 TELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNG--ADVNFKS  581 (710)
Q Consensus       504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~  581 (710)
                                                                ..+..|.||||+|+..|+.+++++|+++|  ++++..+
T Consensus        67 ------------------------------------------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~  104 (228)
T 2dzn_A           67 ------------------------------------------YPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKIT  104 (228)
T ss_dssp             ------------------------------------------CCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCC
T ss_pred             ------------------------------------------cCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCC
Confidence                                                      13445566666666666666666666665  5666666


Q ss_pred             CCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhh-hccccCCCCCCCchhhHH
Q psy15068        582 ATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLID-NLFASVTNPYDPNVYHRI  660 (710)
Q Consensus       582 ~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~~A  660 (710)
                      ..|.||||+|+.. ++.+++++|+++|++++.++ ..|.||||+|+..|+.+++++|+++| ++++.+|..|+||| |+|
T Consensus       105 ~~g~t~L~~A~~~-~~~~~~~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L-~~A  181 (228)
T 2dzn_A          105 NQGVTCLHLAVGK-KWFEVSQFLIENGASVRIKD-KFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPL-FHA  181 (228)
T ss_dssp             TTCCCHHHHHHHT-TCHHHHHHHHHTTCCSCCCC-TTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHH-HHH
T ss_pred             cCCCCHHHHHHHc-CCHhHHHHHHHcCCCccccC-CCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHH-HHH
Confidence            6666666666665 66666666666666666666 66666666666666666666666666 66666666666666 666


Q ss_pred             HHhhh---cccccc-eeehhHHHHhhhcccchhHHHHhhhch
Q psy15068        661 ELMNS---AKQLGL-VHVFEIMKVVKNYAGETLIGVARKMNY  698 (710)
Q Consensus       661 ~~~~~---~~~L~~-~~g~~~~~~~~~~~G~t~l~~a~~~~~  698 (710)
                      +..|+   +++| + ++|+++  +.+|.+|.|||++|++.+.
T Consensus       182 ~~~~~~~~v~~L-l~~~ga~~--~~~~~~g~t~l~~A~~~~~  220 (228)
T 2dzn_A          182 LAEGHGDAAVLL-VEKYGAEY--DLVDNKGAKAEDVALNEQV  220 (228)
T ss_dssp             HHTTCHHHHHHH-HHHHCCCS--CCBCTTSCBGGGGCSSTTH
T ss_pred             HHcCCHHHHHHH-HHhcCCCC--CccCCCCCcHHHHHHHHHH
Confidence            66665   5666 6 556666  6666666666666655543

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=100.00  E-value=1.6e-35  Score=280.10  Aligned_cols=231  Identities=20%  Similarity=0.197  Sum_probs=147.9

Q ss_pred             CCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCC-CCCCHHH
Q psy15068         50 SSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDE-KGYTPLH  128 (710)
Q Consensus        50 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~~~t~L~  128 (710)
                      +..|..|.|+|+.|++.|+.+++++|++.|+ +++.++..|.||||+|+..|+.+++++|++.|++++..+. .|.||||
T Consensus         3 ~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~   81 (240)
T 3eu9_A            3 THIDDYSTWDIVKATQYGIYERCRELVEAGY-DVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLH   81 (240)
T ss_dssp             CCCSCGGGCCHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHH
T ss_pred             cccccccchHHHHHHHcCChHHHHHHHHcCC-CcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhH
Confidence            3445556666666666666666666666665 6666666666666666666666666666666665554332 3566666


Q ss_pred             HHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCC
Q psy15068        129 LACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKN  208 (710)
Q Consensus       129 ~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~  208 (710)
                      +|+..|+.+++++|+++|++++..+..|.|||++|+..+      +.+++++|+++|++++..+. .|.|||+.|+..++
T Consensus        82 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~------~~~~~~~Ll~~~~~~~~~~~-~g~t~l~~a~~~~~  154 (240)
T 3eu9_A           82 WATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFG------HTSIVAYLIAKGQDVDMMDQ-NGMTPLMWAAYRTH  154 (240)
T ss_dssp             HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHCC
T ss_pred             HHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC------HHHHHHHHHhcCCCccccCC-CCCcHHHHHHHhCC
Confidence            666666666666666666666666666666666666666      66666666666666655555 66666666665544


Q ss_pred             -HHHHHHHHhCCCCcchhhc-cCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy15068        209 -LSVVELLIKCKADTNLIVK-VNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKR  286 (710)
Q Consensus       209 -~~~v~~Ll~~g~~~~~~~~-~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~  286 (710)
                       .+++++|++.|++++..+. .+.+| |+.|+..|+.++++ +|.+.|++++..+..|.|||++|++.|+.+++++|+++
T Consensus       155 ~~~~~~~L~~~~~~~~~~~~~~g~t~-L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~  232 (240)
T 3eu9_A          155 SVDPTRLLLTFNVSVNLGDKYHKNTA-LHWAVLAGNTTVIS-LLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEA  232 (240)
T ss_dssp             SSTTHHHHHHTTCCTTCCCTTTCCCH-HHHHHHHTCHHHHH-HHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHH
T ss_pred             hHHHHHHHHhcCCCcchhhccCCCcH-HHHHHHcCCHHHHH-HHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHh
Confidence             5666667777766666655 44444 77777777777776 55556677777777788888888888888888888887


Q ss_pred             CCCC
Q psy15068        287 KFDI  290 (710)
Q Consensus       287 g~~~  290 (710)
                      +.+.
T Consensus       233 ~~~~  236 (240)
T 3eu9_A          233 RQAK  236 (240)
T ss_dssp             C---
T ss_pred             hhcc
Confidence            7654

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=100.00  E-value=1.9e-36  Score=292.01  Aligned_cols=239  Identities=16%  Similarity=0.116  Sum_probs=195.9

Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCc
Q psy15068        358 DQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNN  437 (710)
Q Consensus       358 ~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~  437 (710)
                      .++.++|.+.  +++.++..|.||||+|+..|+.+++++|++.|++++..  .             |.||||+|+.. ++
T Consensus        13 ~~v~~lL~~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~-------------g~t~L~~A~~~-g~   74 (285)
T 3kea_A           13 KQLKSFLSSK--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--E-------------NEFPLHQAATL-ED   74 (285)
T ss_dssp             HHHHHHHHST--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--T-------------TCCHHHHHTTS-SS
T ss_pred             HHHHHHHHhC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--C-------------CCCHHHHHHHc-CC
Confidence            3666666665  57889999999999999999999999999999988765  2             78999999999 99


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccch-HHHHhhhhhhhHHHHHhhhHHH
Q psy15068        438 IEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNK-EAARIAHSTTELEERKKINDLL  516 (710)
Q Consensus       438 ~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~-~~~~~l~~a~~~~~~~~~~~~~  516 (710)
                      .+++++|+++|++++.. +..|.||||+|+..|+.+++++|+++|++++..+  ..+ .+|  +|.|             
T Consensus        75 ~~~v~~Ll~~ga~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~--~~g~~t~--L~~A-------------  136 (285)
T 3kea_A           75 TKIVKILLFSGLDDSQF-DDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYG--KTGWKTS--FYHA-------------  136 (285)
T ss_dssp             CHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCS--SSGGGSH--HHHH-------------
T ss_pred             HHHHHHHHHCCCCCCCc-CCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccC--CCCCCCH--HHHH-------------
Confidence            99999999999999887 8899999999999999999999999998888777  666 677  7777             


Q ss_pred             hhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcH-HHHHHhcC
Q psy15068        517 KLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTA-LHMACRFH  595 (710)
Q Consensus       517 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~-L~~A~~~~  595 (710)
                               +..++.+++++|+++|.+.... ..|.||||+|+..|+.+++++|+++|++++.+|..|+|| ||+|+.. 
T Consensus       137 ---------~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~-  205 (285)
T 3kea_A          137 ---------VMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDN-  205 (285)
T ss_dssp             ---------HHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHH-
T ss_pred             ---------HHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHc-
Confidence                     7777888888888887665322 267788888888888888888888888888888888886 8888887 


Q ss_pred             CchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCC
Q psy15068        596 SNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNP  651 (710)
Q Consensus       596 ~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~  651 (710)
                      ++.+++++|+++|++++..+        +.|+..|+.+++++|+++|++++.....
T Consensus       206 ~~~~~v~~Ll~~gad~~~~~--------~~a~~~~~~~iv~~Ll~~g~~~~~~~~~  253 (285)
T 3kea_A          206 KDIEMLQALFKYDINIYSAN--------LENVLLDDAEIAKMIIEKHVEYKSDSYT  253 (285)
T ss_dssp             TCHHHHHHHTTSCBCSTTTT--------GGGGTTTCHHHHHHHHHHHHHHTTCTTT
T ss_pred             CCHHHHHHHHHcCCCCCCCC--------hhhhhcCCHHHHHHHHHcCCCCCCcccc
Confidence            88888888888888877776        2556677888888888888877655443

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=100.00  E-value=1.3e-35  Score=280.78  Aligned_cols=232  Identities=21%  Similarity=0.224  Sum_probs=158.6

Q ss_pred             CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCC
Q psy15068        371 INAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGAD  450 (710)
Q Consensus       371 ~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~  450 (710)
                      ++..+..+.++|+.|+..|+.+++++|++.|++++..+..             |.||||.|+.. ++.+++++|+++|.+
T Consensus         2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~-------------g~t~L~~A~~~-~~~~~v~~Ll~~~~~   67 (240)
T 3eu9_A            2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKE-------------NVTLLHWAAIN-NRIDLVKYYISKGAI   67 (240)
T ss_dssp             CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-------------SCCHHHHHHHT-TCHHHHHHHHHTTCC
T ss_pred             ccccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCC-------------CCCHHHHHHHh-CCHHHHHHHHHcCCc
Confidence            3455667778888888888888888888888887776666             78888888888 888888888888888


Q ss_pred             CCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCc
Q psy15068        451 VNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNK  530 (710)
Q Consensus       451 ~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~  530 (710)
                      ++...+..|.|||+.|+..|+.+++++|++.|++++..                                          
T Consensus        68 ~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~------------------------------------------  105 (240)
T 3eu9_A           68 VDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLI------------------------------------------  105 (240)
T ss_dssp             TTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCC------------------------------------------
T ss_pred             chhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCccc------------------------------------------
Confidence            77665566788888888888888888887777665544                                          


Q ss_pred             hHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCC
Q psy15068        531 YDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAY  610 (710)
Q Consensus       531 ~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~  610 (710)
                                       +..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++..+++++|++.|++
T Consensus       106 -----------------~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~  168 (240)
T 3eu9_A          106 -----------------DGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVS  168 (240)
T ss_dssp             -----------------CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCC
T ss_pred             -----------------CCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCC
Confidence                             445556666666666666666666666666666666666666666552335666666666666


Q ss_pred             CCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh---cccccceeehhH
Q psy15068        611 YDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS---AKQLGLVHVFEI  677 (710)
Q Consensus       611 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~~~  677 (710)
                      ++..+...|.||||+|+..|+.+++++|+++|++++.+|..|.||| |+|+..|+   +++| +++|++.
T Consensus       169 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l-~~A~~~~~~~~v~~L-~~~~~~~  236 (240)
T 3eu9_A          169 VNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESAL-DLAKQRKNVWMINHL-QEARQAK  236 (240)
T ss_dssp             TTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHH-HHHHHTTCHHHHHHH-HHHC---
T ss_pred             cchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH-HHHHHcCcHHHHHHH-HHhhhcc
Confidence            6666522666666666666666666666666666666666666666 66666666   6666 6655544

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=100.00  E-value=3.9e-37  Score=301.31  Aligned_cols=277  Identities=21%  Similarity=0.215  Sum_probs=208.3

Q ss_pred             HHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCCCCCCCHH
Q psy15068        384 FAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPL  463 (710)
Q Consensus       384 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L  463 (710)
                      .++..++.+.++.++....++......    ......+..+.|||+.|+.. |+.+++++|+++|++++.. +..|.|||
T Consensus         4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~t~l~~A~~~-g~~~~v~~Ll~~g~~~~~~-~~~g~t~L   77 (299)
T 1s70_B            4 ADAKQKRNEQLKRWIGSETDLEPPVVK----RKKTKVKFDDGAVFLAACSS-GDTEEVLRLLERGADINYA-NVDGLTAL   77 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSCCSCCC----CSCCCCEECHHHHHHHHHHH-TCHHHHHHHHHHCCCTTCB-CTTCCBHH
T ss_pred             hHHHHHHHHHHHHHHcccccccccccc----CcccccccCCccHHHHHHHc-CCHHHHHHHHHcCCCCccc-CCCCCCHH
Confidence            355666777777777766554432221    11223344578999999999 9999999999999999988 89999999


Q ss_pred             HHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCc
Q psy15068        464 AVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGAC  543 (710)
Q Consensus       464 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~  543 (710)
                      |+|+..|+.+++++|+++|++++..+  ..|.+|  +|.|                      +..++.+++++|+++|++
T Consensus        78 ~~A~~~g~~~~v~~Ll~~ga~~~~~~--~~g~tp--L~~A----------------------~~~g~~~~v~~Ll~~g~~  131 (299)
T 1s70_B           78 HQACIDDNVDMVKFLVENGANINQPD--NEGWIP--LHAA----------------------ASCGYLDIAEYLISQGAH  131 (299)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCTTCCC--TTSCCH--HHHH----------------------HHHTCHHHHHHHHHTTCC
T ss_pred             HHHHHcCCHHHHHHHHHCCCCCCCCC--CCCCcH--HHHH----------------------HHcCCHHHHHHHHhCCCC
Confidence            99999999999999999999988877  677777  7777                      777777777777777777


Q ss_pred             ccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCH
Q psy15068        544 VNVSSERRGSALIYVAWKGYEEIVDLLLDN-GADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTP  622 (710)
Q Consensus       544 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~  622 (710)
                      ++..+..|.||||+|+..++.+++++++.. |.+++..+..+.++++.         .++.++..+.......+..|.||
T Consensus       132 ~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~---------~~~~~l~~~~~~~~~~~~~g~t~  202 (299)
T 1s70_B          132 VGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLR---------DARQWLNSGHINDVRHAKSGGTA  202 (299)
T ss_dssp             TTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH---------HHHHHHHHTCCCCCCCTTTCCCH
T ss_pred             CCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHH---------HHHHHHhccCcchhhhcCCCCCH
Confidence            777777777777777777777777776654 66655433333333222         22334444444333333788888


Q ss_pred             hHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh---cccccceeehhHHHHhhhcccchhHHHHhhhchh
Q psy15068        623 LKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS---AKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYS  699 (710)
Q Consensus       623 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~~~~~~~~~~~G~t~l~~a~~~~~~  699 (710)
                      ||+|+..|+.+++++|+++|+++|.+|..|+||| |+|+..|+   +++| +++|+++  +.+|..|.||||+|.+....
T Consensus       203 L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL-~~A~~~~~~~~v~~L-l~~gad~--~~~d~~g~t~l~~A~~~~~~  278 (299)
T 1s70_B          203 LHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPL-HAAAHWGKEEACRIL-VENLCDM--EAVNKVGQTAFDVADEDILG  278 (299)
T ss_dssp             HHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHH-HHHHHTTCHHHHHHH-HHTTCCT--TCCCTTSCCTTTSCCSGGGH
T ss_pred             HHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHH-HHHHhcCCHHHHHHH-HHcCCCC--CCcCCCCCCHHHHHHHHHHH
Confidence            8888888888888888888888888888888888 88888888   8888 8888888  88888888888888776665


Q ss_pred             HHHHHH
Q psy15068        700 FLERLE  705 (710)
Q Consensus       700 ~~~~~~  705 (710)
                      .+..+.
T Consensus       279 ~l~~l~  284 (299)
T 1s70_B          279 YLEELQ  284 (299)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            554443

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=100.00  E-value=1.8e-35  Score=289.49  Aligned_cols=271  Identities=23%  Similarity=0.260  Sum_probs=227.6

Q ss_pred             hhhhcChhhHHHHHHhhhccCCC---------ccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHH
Q psy15068         29 SEIMFSEEDAFGYFLQGIINSSS---------AKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAIL   99 (710)
Q Consensus        29 ~a~~~~~~~~~~~ll~~~~~~~~---------~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~   99 (710)
                      .++..++.+.++.++.....+..         .+..|.|+|+.|+..|+.++|++|++.|+ +++..+..|+||||+|+.
T Consensus         4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~   82 (299)
T 1s70_B            4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGA-DINYANVDGLTALHQACI   82 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCC-CTTCBCTTCCBHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCC-CCcccCCCCCCHHHHHHH
Confidence            46677888888888876644332         24467899999999999999999999999 999999999999999999


Q ss_pred             cCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHH
Q psy15068        100 QGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIIS  179 (710)
Q Consensus       100 ~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~  179 (710)
                      .|+.+++++|+++|++++..|..|.||||+|+..|+.++|++|+++|++++..+..|.|||++|+..+      +.++++
T Consensus        83 ~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~------~~~~~~  156 (299)
T 1s70_B           83 DDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEA------MEELLQ  156 (299)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHH------HHHHHH
T ss_pred             cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcc------hHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999      999999


Q ss_pred             HHHHc-CCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCC-CcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCcc
Q psy15068        180 MLIEN-GANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKA-DTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDV  257 (710)
Q Consensus       180 ~Ll~~-~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~  257 (710)
                      .++.. +.+++.... .+.++        ....+..++..+. .....+..+.+| ||.|+..|+.++++ +|.+.|+++
T Consensus       157 ~ll~~~~~~~~~~~~-~~~~~--------~~~~~~~~l~~~~~~~~~~~~~g~t~-L~~A~~~g~~~~v~-~Ll~~g~d~  225 (299)
T 1s70_B          157 NEVNRQGVDIEAARK-EEERI--------MLRDARQWLNSGHINDVRHAKSGGTA-LHVAAAKGYTEVLK-LLIQARYDV  225 (299)
T ss_dssp             HHHHHHTCCHHHHHH-HHHHH--------HHHHHHHHHHHTCCCCCCCTTTCCCH-HHHHHHHTCHHHHH-HHHTTTCCT
T ss_pred             HHHhhcCCCchhhhh-hhhhH--------HHHHHHHHHhccCcchhhhcCCCCCH-HHHHHHCCcHHHHH-HHHHcCCCC
Confidence            88754 555433221 11111        1233444455444 333445566777 99999999999999 888899999


Q ss_pred             ccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhh
Q psy15068        258 SISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQ  320 (710)
Q Consensus       258 ~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~  320 (710)
                      +..+..|.||||+|+..|+.+++++|+++|++++..+..|.||+++|.... .  +.++.+++
T Consensus       226 ~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~-~--~~l~~l~~  285 (299)
T 1s70_B          226 NIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDI-L--GYLEELQK  285 (299)
T ss_dssp             TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSGG-G--HHHHHHHH
T ss_pred             CCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHHH-H--HHHHHHHH
Confidence            999999999999999999999999999999999999999999999996533 2  66666665

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=100.00  E-value=2.2e-35  Score=275.11  Aligned_cols=214  Identities=21%  Similarity=0.202  Sum_probs=171.8

Q ss_pred             ChhhHHHHHHhhhccCCCc-cccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHc
Q psy15068         34 SEEDAFGYFLQGIINSSSA-KSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHH  112 (710)
Q Consensus        34 ~~~~~~~~ll~~~~~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~  112 (710)
                      |+.+++++|+++|.+++.. |..|.||||.|+..|+.+++++|++.|+ +++.++..|+||||+|+..|+.+++++|++.
T Consensus         2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~   80 (223)
T 2f8y_A            2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA-DANIQDNMGRTPLHAAVSADAQGVFQILIRN   80 (223)
T ss_dssp             ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHB
T ss_pred             CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence            6788999999999988776 7899999999999999999999999998 9999999999999999999999999999998


Q ss_pred             CC-CCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccC
Q psy15068        113 GA-NVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREK  191 (710)
Q Consensus       113 g~-~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~  191 (710)
                      ++ +++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..+      +.+++++|+++|++++..
T Consensus        81 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~v~~Ll~~g~~~~~~  154 (223)
T 2f8y_A           81 RATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVN------NVDAAVVLLKNGANKDMQ  154 (223)
T ss_dssp             TTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTT------CHHHHHHHHHTTCCTTCC
T ss_pred             CCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcC------CHHHHHHHHHcCCCCCCc
Confidence            86 88888999999999999999999999999999998888887777777777777      777777777777777666


Q ss_pred             CCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHH
Q psy15068        192 MPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKA  271 (710)
Q Consensus       192 ~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A  271 (710)
                      +. .|.|||+.|+..|+.+++++|+++|++++.                                   .+..|.|||++|
T Consensus       155 ~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-----------------------------------~~~~g~t~l~~A  198 (223)
T 2f8y_A          155 NN-REETPLFLAAREGSYETAKVLLDHFANRDI-----------------------------------TDHMDRLPRDIA  198 (223)
T ss_dssp             CT-TCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-----------------------------------CCTTCCCHHHHH
T ss_pred             CC-CCcCHHHHHHHcCCHHHHHHHHHcCCCCcc-----------------------------------ccccCCCHHHHH
Confidence            65 667777777777777777776666665544                                   444555666666


Q ss_pred             HHcCCHHHHHHHHHcCCCC
Q psy15068        272 CHVGNLQIVQMLVKRKFDI  290 (710)
Q Consensus       272 ~~~~~~~~v~~Ll~~g~~~  290 (710)
                      +..++.+++++|+++|+..
T Consensus       199 ~~~~~~~i~~~L~~~g~~~  217 (223)
T 2f8y_A          199 QERMHHDIVRLLDEYNLVR  217 (223)
T ss_dssp             HHTTCHHHHHHHHHTTCSS
T ss_pred             HHhcchHHHHHHHHcCCCc
Confidence            6666666666666666543

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=100.00  E-value=3.7e-37  Score=303.21  Aligned_cols=262  Identities=12%  Similarity=0.045  Sum_probs=162.2

Q ss_pred             HHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhh----ccccCccccCCHHHHHHHc
Q psy15068        359 QIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFIS----DARSSDFCFRSALQYACKH  434 (710)
Q Consensus       359 ~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~----~~~~~~~~~~t~l~~A~~~  434 (710)
                      +++++|++.|++++..+..|.++++     |+.+++++|+++|++++..........    ..........+..|.|+..
T Consensus        33 dlv~~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~  107 (327)
T 1sw6_A           33 DLTSDFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDS  107 (327)
T ss_dssp             TCCCSTTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------CHHH
T ss_pred             chHHHHhhCCcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHh
Confidence            6788899999999999999999987     899999999999988654211000000    0000111122334677776


Q ss_pred             cCcHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhH
Q psy15068        435 KNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKIND  514 (710)
Q Consensus       435 ~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~  514 (710)
                       +..+++++|++.|++++...+..|.||||+|+..|+.+++++|+++|++++..+  ..|.+|  +|.|           
T Consensus       108 -~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d--~~g~Tp--Lh~A-----------  171 (327)
T 1sw6_A          108 -LLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGD--NMGESC--LVKA-----------  171 (327)
T ss_dssp             -HHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCC--TTCCCH--HHHH-----------
T ss_pred             -hHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcC--CCCCCH--HHHH-----------
Confidence             778899999999999998338899999999999999999999999888887766  666666  6666           


Q ss_pred             HHhhhHHHHHhhhcCc---hHHHHHHHhcC-CcccccCCCCCcHHHHHHH----cCCHHHHHHHHHc-------------
Q psy15068        515 LLKLNLDFLKNVRSNK---YDEVKKNIEDG-ACVNVSSERRGSALIYVAW----KGYEEIVDLLLDN-------------  573 (710)
Q Consensus       515 ~~~~~~~~~~~~~~~~---~~~~~~ll~~~-~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~-------------  573 (710)
                                 +..++   .++++.|++.+ .+++.++..|+||||+|+.    .|+.+++++|++.             
T Consensus       172 -----------~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i  240 (327)
T 1sw6_A          172 -----------VKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPI  240 (327)
T ss_dssp             -----------HHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCE
T ss_pred             -----------HHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHH
Confidence                       55444   45555555554 4566666666666666666    5666666666655             


Q ss_pred             -------CCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccc
Q psy15068        574 -------GADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFA  646 (710)
Q Consensus       574 -------g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~  646 (710)
                             |++++.++..|.||||+|+.       +++|+++  +++.++ ..|+||||+|+..|+.++|++|+++|+|++
T Consensus       241 ~~~~~~~g~~~~~~~~~g~t~L~~a~~-------~~~Ll~~--~~n~~d-~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~  310 (327)
T 1sw6_A          241 QSGTNEKESKPNDKNGERKDSILENLD-------LKWIIAN--MLNAQD-SNGDTCLNIAARLGNISIVDALLDYGADPF  310 (327)
T ss_dssp             EEC----------------CHHHHHCS-------HHHHHHH--TTTCCC-TTSCCHHHHHHHHCCHHHHHHHHHTTCCTT
T ss_pred             HhhhhcccCCcccccccCCChhHHHHH-------HHHHHHh--CCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence                   56666666666666666653       5556555  355555 566666666666666666666666666666


Q ss_pred             cCCCCCCCchhhHHHHh
Q psy15068        647 SVTNPYDPNVYHRIELM  663 (710)
Q Consensus       647 ~~~~~g~t~L~~~A~~~  663 (710)
                      .+|..|+||| |+|+..
T Consensus       311 ~~d~~G~TpL-~~A~~~  326 (327)
T 1sw6_A          311 IANKSGLRPV-DFGAGL  326 (327)
T ss_dssp             CCCTTSCCGG-GGTCC-
T ss_pred             ccCCCCCCHH-HHHHhc
Confidence            6666666666 666544

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=100.00  E-value=4e-37  Score=302.92  Aligned_cols=257  Identities=16%  Similarity=0.150  Sum_probs=209.5

Q ss_pred             hhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCcc-----------------ccCCCC
Q psy15068         29 SEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNE-----------------KLQDGR   91 (710)
Q Consensus        29 ~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-----------------~~~~g~   91 (710)
                      .+......+++++|+++|++++..+..|.|+++     |+.++|++|+++|. +++.                 +.....
T Consensus        25 ~~~~~~~~dlv~~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~-~~~~~~~~~a~~~~~~~~~~~~~~~~~   98 (327)
T 1sw6_A           25 GPIITFTHDLTSDFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLL-FPEIQEMPTSLNNDSSNRNSEGGSSNQ   98 (327)
T ss_dssp             CCEEECCTTCCCSTTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHH-C--------------------------
T ss_pred             cchhhhcCchHHHHhhCCcccccCCCCCCcccC-----chhHHHHHHHHhcc-CCccccchHhhhcccccccccccCCcc
Confidence            333456779999999999999999999999987     99999999999997 6554                 111222


Q ss_pred             cHHHHHHHcCcHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCC
Q psy15068         92 TALYMAILQGLYKMVTLLIHHGANVND-RDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSED  170 (710)
Q Consensus        92 t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~  170 (710)
                      +.+|.|+..+..+++++|++.|++++. +|..|.||||+|+..|+.++|++|+++|++++.++..|.||||+|+..+   
T Consensus        99 ~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g---  175 (327)
T 1sw6_A           99 QQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSV---  175 (327)
T ss_dssp             -----CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSS---
T ss_pred             chhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhc---
Confidence            345888888889999999999999999 8999999999999999999999999999999999999999999999998   


Q ss_pred             CCCH---HHHHHHHHHcC-CCcccCCCCCCCCHHHHHHH----hCCHHHHHHHHhC--------------------CCCc
Q psy15068        171 STDT---NEIISMLIENG-ANVREKMPFTDFSPLHFAVV----KKNLSVVELLIKC--------------------KADT  222 (710)
Q Consensus       171 ~~~~---~~~~~~Ll~~~-~~~~~~~~~~~~~~l~~A~~----~~~~~~v~~Ll~~--------------------g~~~  222 (710)
                         +   .++++.|++.+ .+++..+. .|.||||+|+.    .|+.+++++|++.                    |+++
T Consensus       176 ---~~~~~~~~~~ll~~~~~~~~~~d~-~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~  251 (327)
T 1sw6_A          176 ---NNYDSGTFEALLDYLYPCLILEDS-MNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKP  251 (327)
T ss_dssp             ---HHHHTTCHHHHHHHHGGGGGEECT-TCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC--------
T ss_pred             ---ccccHHHHHHHHHhhhccccCCCC-CCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCc
Confidence               7   57777777776 66777777 99999999999    8999999999987                    8899


Q ss_pred             chhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHH
Q psy15068        223 NLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMF  302 (710)
Q Consensus       223 ~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~  302 (710)
                      +..+..+.+| |+.|+.      ++ +|++.  +++..+..|+||||+|+..|+.++|++|+++|++++.++..|.|||+
T Consensus       252 ~~~~~~g~t~-L~~a~~------~~-~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~  321 (327)
T 1sw6_A          252 NDKNGERKDS-ILENLD------LK-WIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVD  321 (327)
T ss_dssp             --------CH-HHHHCS------HH-HHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGG
T ss_pred             ccccccCCCh-hHHHHH------HH-HHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHH
Confidence            9999999998 999986      77 45444  68899999999999999999999999999999999999999999999


Q ss_pred             HHHHhC
Q psy15068        303 FAIGMG  308 (710)
Q Consensus       303 ~a~~~~  308 (710)
                      +|+..|
T Consensus       322 ~A~~~g  327 (327)
T 1sw6_A          322 FGAGLE  327 (327)
T ss_dssp             GTCC--
T ss_pred             HHHhcC
Confidence            998654

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=100.00  E-value=5.5e-35  Score=273.59  Aligned_cols=209  Identities=21%  Similarity=0.179  Sum_probs=111.8

Q ss_pred             cccchhhhhhcChhhHHHHHHhhhccCCC-ccccchhHHHHHHhcCCHHHHHHHHhcCC-CCCcc-ccCCCCcHHHHHHH
Q psy15068         23 RHHHLFSEIMFSEEDAFGYFLQGIINSSS-AKSVELTLLCSAVWDNKIREVEFLLSTGD-HDVNE-KLQDGRTALYMAIL   99 (710)
Q Consensus        23 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~-~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~-~~~~~-~~~~g~t~L~~A~~   99 (710)
                      +.|||+.|+..|+.+++++|++.+.++.. .+..|.||||.|+..|+.+++++|++.++ .+++. .+..|+||||+|+.
T Consensus         2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~   81 (228)
T 2dzn_A            2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS   81 (228)
T ss_dssp             -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred             CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence            34555555555555555555555544333 55555555555555555555555555552 03333 44555555555555


Q ss_pred             cCcHHHHHHHHHcC--CCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHH
Q psy15068        100 QGLYKMVTLLIHHG--ANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEI  177 (710)
Q Consensus       100 ~g~~~~v~~Ll~~g--~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~  177 (710)
                      .|+.+++++|++.|  ++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..+      +.++
T Consensus        82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~  155 (228)
T 2dzn_A           82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVG------SLKL  155 (228)
T ss_dssp             HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTT------CHHH
T ss_pred             cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcC------CHHH
Confidence            55555555555555  555555555555555555555555555555555555555555555555555555      5555


Q ss_pred             HHHHHHcC-CCcccCCCCCCCCHHHHHHHhCCHHHHHHHH-hCCCCcchhhccCCChhHHHHHh
Q psy15068        178 ISMLIENG-ANVREKMPFTDFSPLHFAVVKKNLSVVELLI-KCKADTNLIVKVNQEPLLFFAIE  239 (710)
Q Consensus       178 ~~~Ll~~~-~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~~~~~~l~~A~~  239 (710)
                      +++|++.| ++++..+. .|.|||+.|+..|+.+++++|+ +.|++++..+..+.+| +++|+.
T Consensus       156 v~~Ll~~g~~~~~~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~-l~~A~~  217 (228)
T 2dzn_A          156 IELLCGLGKSAVNWQDK-QGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKA-EDVALN  217 (228)
T ss_dssp             HHHHHTTTCCCSCCCCT-TSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBG-GGGCSS
T ss_pred             HHHHHhcCcccccCcCC-CCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcH-HHHHHH
Confidence            55555555 44444444 4555555555555555555555 4454444444444444 444433

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=100.00  E-value=5e-35  Score=272.67  Aligned_cols=213  Identities=19%  Similarity=0.229  Sum_probs=163.7

Q ss_pred             CCHHHHHHHHhcCCCCCccc-cCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhC
Q psy15068         67 NKIREVEFLLSTGDHDVNEK-LQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSK  145 (710)
Q Consensus        67 g~~~~v~~Ll~~~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~  145 (710)
                      |+.+++++|++.|+ +++.. +..|+||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++
T Consensus         2 g~~~~i~~Ll~~g~-~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~   80 (223)
T 2f8y_A            2 DAPAVISDFIYQGA-SLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRN   80 (223)
T ss_dssp             ---CCEETTEETTC-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHB
T ss_pred             CcHHHHHHHHHcCC-CcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence            67888888888888 66654 78899999999999999999999999999888888899999999999999999999888


Q ss_pred             CC-CccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcch
Q psy15068        146 KA-DVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNL  224 (710)
Q Consensus       146 g~-~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~  224 (710)
                      ++ +++..+..+.|||++|+                                        ..++.+++++|++.|++++.
T Consensus        81 ~~~~~~~~~~~g~t~L~~A~----------------------------------------~~~~~~~~~~Ll~~g~~~~~  120 (223)
T 2f8y_A           81 RATDLDARMHDGTTPLILAA----------------------------------------RLAVEGMLEDLINSHADVNA  120 (223)
T ss_dssp             TTSCTTCCCTTCCCHHHHHH----------------------------------------HHTCHHHHHHHHHTTCCTTC
T ss_pred             CCCCcccCCCCCCcHHHHHH----------------------------------------HhCcHHHHHHHHHcCCCCcC
Confidence            76 56555555555555554                                        44555555555555555554


Q ss_pred             hhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHH
Q psy15068        225 IVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFA  304 (710)
Q Consensus       225 ~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a  304 (710)
                      .+..+.+| ||+|+..|+.++++ +|.+.|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||+++|
T Consensus       121 ~~~~g~t~-L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A  198 (223)
T 2f8y_A          121 VDDLGKSA-LHWAAAVNNVDAAV-VLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIA  198 (223)
T ss_dssp             BCTTSCBH-HHHHHHTTCHHHHH-HHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred             cCCCCCcH-HHHHHHcCCHHHHH-HHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHH
Confidence            44445554 55555555555555 44455666677788889999999999999999999999999999999999999999


Q ss_pred             HHhCCCcHHHHHHHhhccccc
Q psy15068        305 IGMGRKHTHVAEYLLQQDSIN  325 (710)
Q Consensus       305 ~~~~~~~~~~~~~Ll~~~~~~  325 (710)
                      +..++.  +++++|++ .+..
T Consensus       199 ~~~~~~--~i~~~L~~-~g~~  216 (223)
T 2f8y_A          199 QERMHH--DIVRLLDE-YNLV  216 (223)
T ss_dssp             HHTTCH--HHHHHHHH-TTCS
T ss_pred             HHhcch--HHHHHHHH-cCCC
Confidence            999988  99999998 4443

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=100.00  E-value=4.2e-35  Score=275.44  Aligned_cols=219  Identities=22%  Similarity=0.206  Sum_probs=190.0

Q ss_pred             CCCCCCCcHHHHHHHcCCHHHHHHHHHcCC----CCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCC
Q psy15068        373 AEGDDMITPLLFAAKHCDLQSAKYLIQKGA----NVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHG  448 (710)
Q Consensus       373 ~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~----~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~  448 (710)
                      .++..|.||||+|+..|+.+++++|++.+.    +++..+..             |.||||+|+.. ++.+++++|+++|
T Consensus         3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~-------------g~t~L~~A~~~-~~~~~v~~Ll~~g   68 (236)
T 1ikn_D            3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNL-------------QQTPLHLAVIT-NQPEIAEALLGAG   68 (236)
T ss_dssp             ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTT-------------CCCHHHHHHHT-TCHHHHHCCCSCC
T ss_pred             cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCC-------------CCCHHHHHHHc-CCHHHHHHHHHcC
Confidence            467789999999999999999999988765    57766666             99999999999 9999999999999


Q ss_pred             CCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhc
Q psy15068        449 ADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRS  528 (710)
Q Consensus       449 ~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~  528 (710)
                      ++++.. +..|.||||+|+..|+.+++++|++.|++.....                                       
T Consensus        69 ~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~---------------------------------------  108 (236)
T 1ikn_D           69 CDPELR-DFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHS---------------------------------------  108 (236)
T ss_dssp             CCSCCC-CTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSC---------------------------------------
T ss_pred             CCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHH---------------------------------------
Confidence            999888 8899999999999999999999999887643221                                       


Q ss_pred             CchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCcHHHHHHhcCCchHHHHHHHHc
Q psy15068        529 NKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSA-TGFTALHMACRFHSNDNIVRKLLHH  607 (710)
Q Consensus       529 ~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~~v~~Ll~~  607 (710)
                                    .++..+..|.||||+|+..|+.+++++|+++|++++.++. .|+||||+|+.. ++.+++++|+++
T Consensus       109 --------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~-~~~~~v~~Ll~~  173 (236)
T 1ikn_D          109 --------------ILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDL-QNPDLVSLLLKC  173 (236)
T ss_dssp             --------------GGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT-TCHHHHHHHHTT
T ss_pred             --------------HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHc
Confidence                          1456778899999999999999999999999999999997 999999999999 999999999999


Q ss_pred             CCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccc--cCCCCCCCchhhHHHH
Q psy15068        608 GAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFA--SVTNPYDPNVYHRIEL  662 (710)
Q Consensus       608 g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~~A~~  662 (710)
                      |++++.++ ..|.||||+|+..|+.+++++|+++|++..  .++..|.||. +.++.
T Consensus       174 ga~~~~~~-~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~-~~~~~  228 (236)
T 1ikn_D          174 GADVNRVT-YQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESY-DTESE  228 (236)
T ss_dssp             TCCSCCCC-TTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCC-CCC--
T ss_pred             CCCCCccc-CCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHH-hhhcc
Confidence            99999999 999999999999999999999999999877  7899999998 66543

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=100.00  E-value=1.1e-33  Score=246.75  Aligned_cols=156  Identities=33%  Similarity=0.408  Sum_probs=84.2

Q ss_pred             chhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHH
Q psy15068         26 HLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKM  105 (710)
Q Consensus        26 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~  105 (710)
                      .|+.|+..|+.++|++|+++|+++|.+|..|.||||.|+..++.+++++|++.|+ +++.+|..|+||||+|+..|+.++
T Consensus         7 ~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~ga-d~~~~d~~g~TpLh~A~~~g~~~~   85 (169)
T 4gpm_A            7 RLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGA-DVNAKDSDGRTPLHHAAENGHKEV   85 (169)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhccc-chhhhccCCCCHHHHHHHcCCHHH
Confidence            3555555555555555555555555555555555555555555555555555555 555555555555555555555555


Q ss_pred             HHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcC
Q psy15068        106 VTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENG  185 (710)
Q Consensus       106 v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~  185 (710)
                      +++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++++.++..|.|||++|+..+      +.+++++|+++|
T Consensus        86 v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g------~~~iv~~Ll~~G  159 (169)
T 4gpm_A           86 VKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHG------NEEVVKLLEKQG  159 (169)
T ss_dssp             HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHTC-
T ss_pred             HHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcC------CHHHHHHHHHCC
Confidence            55555555555555555555555555555555555555555555555555555555555555      555555555555


Q ss_pred             CCc
Q psy15068        186 ANV  188 (710)
Q Consensus       186 ~~~  188 (710)
                      +++
T Consensus       160 A~i  162 (169)
T 4gpm_A          160 GWL  162 (169)
T ss_dssp             ---
T ss_pred             CCc
Confidence            444

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=100.00  E-value=1e-32  Score=240.63  Aligned_cols=159  Identities=38%  Similarity=0.451  Sum_probs=150.2

Q ss_pred             hHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHH
Q psy15068         58 TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKN  137 (710)
Q Consensus        58 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~  137 (710)
                      +.|+.||+.|+.++|++|++.|+ ++|.+|..|+||||+|+..++.+++++|++.|++++.+|..|.||||+|+..|+.+
T Consensus         6 ~~L~~Aa~~G~~~~v~~Ll~~Ga-dvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~   84 (169)
T 4gpm_A            6 KRLIEAAENGNKDRVKDLIENGA-DVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKE   84 (169)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHH
Confidence            67999999999999999999999 99999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHh
Q psy15068        138 IVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIK  217 (710)
Q Consensus       138 iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~  217 (710)
                      +|++|+++|++++.++..|.||||+|+..+      +.+++++|+++|++++..+. .|.|||++|+..|+.+++++|++
T Consensus        85 ~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g------~~~~v~~Ll~~gad~~~~d~-~G~TpL~~A~~~g~~~iv~~Ll~  157 (169)
T 4gpm_A           85 VVKLLISKGADVNAKDSDGRTPLHHAAENG------HKEVVKLLISKGADVNTSDS-DGRTPLDLAREHGNEEVVKLLEK  157 (169)
T ss_dssp             HHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHT
T ss_pred             HHHHHHHCcCCCCCCCCCCCCHHHHHHHcC------CHHHHHHHHHcCCCccccCC-CCCCHHHHHHHcCCHHHHHHHHH
Confidence            999999999999999999999999999999      99999999999999999888 99999999999999999999999


Q ss_pred             CCCCcch
Q psy15068        218 CKADTNL  224 (710)
Q Consensus       218 ~g~~~~~  224 (710)
                      +|+++.-
T Consensus       158 ~GA~ie~  164 (169)
T 4gpm_A          158 QGGWLEH  164 (169)
T ss_dssp             C------
T ss_pred             CCCCcCC
Confidence            9998753

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=100.00  E-value=2e-32  Score=250.51  Aligned_cols=196  Identities=20%  Similarity=0.244  Sum_probs=166.8

Q ss_pred             cccccchhhhhhcChhhHHHHHHhhhc-cCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHH
Q psy15068         21 SYRHHHLFSEIMFSEEDAFGYFLQGII-NSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAIL   99 (710)
Q Consensus        21 ~~~~~~l~~a~~~~~~~~~~~ll~~~~-~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~   99 (710)
                      +++.++|+.|+..|+.+.+++|++.+. +++..|..|.||||.|+..|+.++|++|++.|+ +++.++..|+||||+|+.
T Consensus         3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~l~~A~~   81 (201)
T 3hra_A            3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGA-DINLQNSISDSPYLYAGA   81 (201)
T ss_dssp             CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHH
T ss_pred             cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCCCCCCCCHHHHHHH
Confidence            467788999999999999998888775 888888889999999999999999999999988 888888889999999999


Q ss_pred             cCcHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCC-CCccccccCCCchhHHhhhccCCCCCCHHHH
Q psy15068        100 QGLYKMVTLLI-HHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKK-ADVRAKCSMMVTPILAVSANMSEDSTDTNEI  177 (710)
Q Consensus       100 ~g~~~~v~~Ll-~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g-~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~  177 (710)
                      .|+.+++++|+ ..+++++..+..|.||||+|+..|+.+++++|+++| ++++.++..|.||||+|+..+.... .+.++
T Consensus        82 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~-~~~~~  160 (201)
T 3hra_A           82 QGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQ-LYQDI  160 (201)
T ss_dssp             TTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSH-HHHHH
T ss_pred             cCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchh-hHHHH
Confidence            99999999888 556788888888899999999999999999999888 8888888888999999887772100 02888


Q ss_pred             HHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCC
Q psy15068        178 ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCK  219 (710)
Q Consensus       178 ~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g  219 (710)
                      +++|+++|++++..+. .|.|||++|+..|+.+++++|+++|
T Consensus       161 v~~Ll~~ga~~~~~~~-~g~t~l~~A~~~~~~~~~~~Ll~~G  201 (201)
T 3hra_A          161 VKLLMENGADQSIKDN-SGRTAMDYANQKGYTEISKILAQYN  201 (201)
T ss_dssp             HHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred             HHHHHHCCCCCCccCC-CCCCHHHHHHHcCCHhHHHHHHhcC
Confidence            8888888888888877 8888999988888888888888876

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=100.00  E-value=1.1e-33  Score=265.84  Aligned_cols=206  Identities=23%  Similarity=0.215  Sum_probs=171.2

Q ss_pred             cccccccchhhhhhcChhhHHHHHHhhhc----cCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHH
Q psy15068         19 ESSYRHHHLFSEIMFSEEDAFGYFLQGII----NSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTAL   94 (710)
Q Consensus        19 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~----~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L   94 (710)
                      ....+.|||+.|+..|+.+++++|++.+.    +++..+..|.||||.|+..|+.++|++|++.|+ +++.++..|+|||
T Consensus         4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L   82 (236)
T 1ikn_D            4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGC-DPELRDFRGNTPL   82 (236)
T ss_dssp             ---CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCC-CSCCCCTTCCCHH
T ss_pred             CCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCCCHH
Confidence            34567899999999999999999988765    688888889999999999999999999999988 8888888999999


Q ss_pred             HHHHHcCcHHHHHHHHHcCCC------CCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCcccccc-CCCchhHHhhhcc
Q psy15068         95 YMAILQGLYKMVTLLIHHGAN------VNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCS-MMVTPILAVSANM  167 (710)
Q Consensus        95 ~~A~~~g~~~~v~~Ll~~g~~------~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~-~~~~~l~~a~~~~  167 (710)
                      |+|+..|+.+++++|++.|++      ++..+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..+
T Consensus        83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~  162 (236)
T 1ikn_D           83 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ  162 (236)
T ss_dssp             HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred             HHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcC
Confidence            999999999999999998865      466778889999999999999999999999999888887 8888888888888


Q ss_pred             CCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcc--hhhccCCCh
Q psy15068        168 SEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTN--LIVKVNQEP  232 (710)
Q Consensus       168 ~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~~~~~  232 (710)
                            +.+++++|+++|++++..+. .|.|||++|+..|+.+++++|+++|++..  .++..+.++
T Consensus       163 ------~~~~v~~Ll~~ga~~~~~~~-~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~  222 (236)
T 1ikn_D          163 ------NPDLVSLLLKCGADVNRVTY-QGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEES  222 (236)
T ss_dssp             ------CHHHHHHHHTTTCCSCCCCT-TCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTC
T ss_pred             ------CHHHHHHHHHcCCCCCcccC-CCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHH
Confidence                  88888888888888888877 88888888888888888888888888665  444444444

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=100.00  E-value=4e-33  Score=265.53  Aligned_cols=201  Identities=19%  Similarity=0.152  Sum_probs=179.2

Q ss_pred             cCCHHHHHHHccCcHH----HHHHHHHCCCCCCC---CCCCCCCCHHHHHHHc---CCHhHHHHHHHcCCCCCchhhccc
Q psy15068        424 FRSALQYACKHKNNIE----MVKLLLLHGADVND---TSNKPKQKPLAVAIQS---GDFQIVKELQNYGAQIDKENYLKN  493 (710)
Q Consensus       424 ~~t~l~~A~~~~~~~~----~~~~Ll~~~~~~~~---~~~~~~~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~~~  493 (710)
                      |+||||.|+.. |+.+    ++++|+++|.+++.   ..+..|.||||+|+..   |+.+++++|++.|++++..+    
T Consensus         2 G~t~L~~A~~~-g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~----   76 (256)
T 2etb_A            2 DRDRLFSVVSR-GVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPK----   76 (256)
T ss_dssp             CHHHHHHHHHH-TCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSS----
T ss_pred             CccHHHHHHHc-CCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchh----
Confidence            88999999999 9986    67788889999998   2389999999999999   99999999999887765332    


Q ss_pred             hHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy15068        494 KEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDN  573 (710)
Q Consensus       494 ~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~  573 (710)
                            .                                    ++.  ......+..|.||||+|+..|+.+++++|+++
T Consensus        77 ------~------------------------------------~~~--~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~  112 (256)
T 2etb_A           77 ------P------------------------------------LVN--AQCTDEFYQGHSALHIAIEKRSLQCVKLLVEN  112 (256)
T ss_dssp             ------C------------------------------------GGG--CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             ------h------------------------------------hcc--cccccccccCCCHHHHHHHcCCHHHHHHHHHc
Confidence                  0                                    000  11234557899999999999999999999999


Q ss_pred             CCCCcccCCC-------------CCcHHHHHHhcCCchHHHHHHHH---cCCCCCCCCCCCCCCHhHHHHh--CCChh--
Q psy15068        574 GADVNFKSAT-------------GFTALHMACRFHSNDNIVRKLLH---HGAYYDMKDGKTGKTPLKHAEA--GKNRD--  633 (710)
Q Consensus       574 g~~~~~~~~~-------------g~t~L~~A~~~~~~~~~v~~Ll~---~g~~~~~~~~~~g~t~L~~A~~--~~~~~--  633 (710)
                      |++++..+..             |.||||+|+.. |+.+++++|++   +|++++.++ ..|+||||+|+.  .++.+  
T Consensus       113 ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~-~~~~~v~~Ll~~~~~ga~~n~~d-~~g~TpLh~A~~~~~~~~~~~  190 (256)
T 2etb_A          113 GADVHLRACGRFFQKHQGTCFYFGELPLSLAACT-KQWDVVTYLLENPHQPASLEATD-SLGNTVLHALVMIADNSPENS  190 (256)
T ss_dssp             TCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHT-TCHHHHHHHHHCSSCCCCTTCCC-TTSCCHHHHHHHHCCSCHHHH
T ss_pred             CCCCCcccccccccccccccccCCCCHHHHHHHc-CCHHHHHHHHhccccCCCcCccC-CCCCCHHHHHHHcccCCchhh
Confidence            9999999886             99999999999 99999999999   999999999 999999999998  88888  


Q ss_pred             -----HHHHHHhhhhcc-------ccCCCCCCCchhhHHHHhhh---cccccceeehhH
Q psy15068        634 -----IIDLLHLIDNLF-------ASVTNPYDPNVYHRIELMNS---AKQLGLVHVFEI  677 (710)
Q Consensus       634 -----~v~~Ll~~g~~~-------~~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~~~  677 (710)
                           ++++|+++|+++       +.+|..|+||| |+|+..|+   +++| +++|++.
T Consensus       191 ~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL-~~A~~~g~~~~v~~L-l~~g~~~  247 (256)
T 2etb_A          191 ALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPL-KLAAKEGKIEIFRHI-LQREFSG  247 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHH-HHHHHTTCHHHHHHH-HHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCcccccccccccCCCCCCHH-HHHHHhCCHHHHHHH-HhCCCCC
Confidence                 999999999999       99999999999 99999999   9999 9999988

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=100.00  E-value=3.4e-33  Score=266.08  Aligned_cols=195  Identities=23%  Similarity=0.283  Sum_probs=178.3

Q ss_pred             ccccchhhhhhcChhh----HHHHHHhhhccCCC----ccccchhHHHHHHhc---CCHHHHHHHHhcCCCCCcc-----
Q psy15068         22 YRHHHLFSEIMFSEED----AFGYFLQGIINSSS----AKSVELTLLCSAVWD---NKIREVEFLLSTGDHDVNE-----   85 (710)
Q Consensus        22 ~~~~~l~~a~~~~~~~----~~~~ll~~~~~~~~----~~~~~~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~-----   85 (710)
                      ++.|+|+.|+..|+.+    ++++|+++|++++.    .|..|.||||.|+..   |+.++|++|++.|+ +++.     
T Consensus         1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~-~~~~~~~~~   79 (256)
T 2etb_A            1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDK-DSGNPKPLV   79 (256)
T ss_dssp             CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHH-HTTCSSCGG
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCC-cccchhhhc
Confidence            4789999999999997    66777779999998    899999999999999   99999999999988 6553     


Q ss_pred             ------ccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCC-------------CCCHHHHHHhcCCHHHHHHHHh--
Q psy15068         86 ------KLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEK-------------GYTPLHLACYLGNKNIVKFLLS--  144 (710)
Q Consensus        86 ------~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-------------~~t~L~~A~~~g~~~iv~~Ll~--  144 (710)
                            +|..|+||||+|+..|+.+++++|+++|++++..+..             |.||||+|+..|+.+++++|++  
T Consensus        80 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~  159 (256)
T 2etb_A           80 NAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENP  159 (256)
T ss_dssp             GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred             ccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence                  3478999999999999999999999999999999886             9999999999999999999999  


Q ss_pred             -CCCCccccccCCCchhHHhhh--ccCCCCCCHHH-------HHHHHHHcCCCc-------ccCCCCCCCCHHHHHHHhC
Q psy15068        145 -KKADVRAKCSMMVTPILAVSA--NMSEDSTDTNE-------IISMLIENGANV-------REKMPFTDFSPLHFAVVKK  207 (710)
Q Consensus       145 -~g~~~~~~~~~~~~~l~~a~~--~~~~~~~~~~~-------~~~~Ll~~~~~~-------~~~~~~~~~~~l~~A~~~~  207 (710)
                       +|++++.++..|.||||+|+.  .+      +.+       ++++|+++|+++       +..+. .|.|||++|+..|
T Consensus       160 ~~ga~~n~~d~~g~TpLh~A~~~~~~------~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~-~g~tpL~~A~~~g  232 (256)
T 2etb_A          160 HQPASLEATDSLGNTVLHALVMIADN------SPENSALVIHMYDGLLQMGARLCPTVQLEEISNH-QGLTPLKLAAKEG  232 (256)
T ss_dssp             SCCCCTTCCCTTSCCHHHHHHHHCCS------CHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCT-TSCCHHHHHHHTT
T ss_pred             ccCCCcCccCCCCCCHHHHHHHcccC------CchhhHHHHHHHHHHHHcCCCcccccccccccCC-CCCCHHHHHHHhC
Confidence             999999999999999999998  56      777       999999999998       66776 9999999999999


Q ss_pred             CHHHHHHHHhCCCCcch
Q psy15068        208 NLSVVELLIKCKADTNL  224 (710)
Q Consensus       208 ~~~~v~~Ll~~g~~~~~  224 (710)
                      +.+++++|+++|++...
T Consensus       233 ~~~~v~~Ll~~g~~~~~  249 (256)
T 2etb_A          233 KIEIFRHILQREFSGAA  249 (256)
T ss_dssp             CHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHhCCCCCCC
Confidence            99999999999876544

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=100.00  E-value=6.1e-33  Score=266.98  Aligned_cols=217  Identities=18%  Similarity=0.144  Sum_probs=174.3

Q ss_pred             CccccCCHHHHHHHccCcHHHHHHHHH----CCCCCCC---CCCCCCCCHHHHHHHc---CCHhHHHHHHHcCCCCCchh
Q psy15068        420 SDFCFRSALQYACKHKNNIEMVKLLLL----HGADVND---TSNKPKQKPLAVAIQS---GDFQIVKELQNYGAQIDKEN  489 (710)
Q Consensus       420 ~~~~~~t~l~~A~~~~~~~~~~~~Ll~----~~~~~~~---~~~~~~~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~~~  489 (710)
                      .+..|.||||.|+.. |+.++++.|++    .+.+++.   ..+..|.||||+|+..   |+.+++++|+++|++++.. 
T Consensus         9 ~d~~g~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~-   86 (273)
T 2pnn_A            9 PRLYDRRSIFDAVAQ-SNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSL-   86 (273)
T ss_dssp             --CCCHHHHHHHHHT-TCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCH-
T ss_pred             CCcccchHHHHHHHc-CCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccch-
Confidence            444599999999999 99998888876    5666552   2377899999999987   9999999999988654321 


Q ss_pred             hccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHH
Q psy15068        490 YLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDL  569 (710)
Q Consensus       490 ~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~  569 (710)
                                                                   +.+++.  .+...+..|.||||+|+..|+.+++++
T Consensus        87 ---------------------------------------------~~~i~~--~~~~~d~~g~tpL~~A~~~g~~~~v~~  119 (273)
T 2pnn_A           87 ---------------------------------------------KQFVNA--SYTDSYYKGQTALHIAIERRNMTLVTL  119 (273)
T ss_dssp             ---------------------------------------------HHHHTC--CCCSTTTTTCCHHHHHHHTTCHHHHHH
T ss_pred             ---------------------------------------------hHHhhc--ccccccCCCCCHHHHHHHcCCHHHHHH
Confidence                                                         112221  133456789999999999999999999


Q ss_pred             HHHcCCCCcccCC--------------CCCcHHHHHHhcCCchHHHHHHHH---cCCCCCCCCCCCCCCHhHHHHhCCC-
Q psy15068        570 LLDNGADVNFKSA--------------TGFTALHMACRFHSNDNIVRKLLH---HGAYYDMKDGKTGKTPLKHAEAGKN-  631 (710)
Q Consensus       570 Ll~~g~~~~~~~~--------------~g~t~L~~A~~~~~~~~~v~~Ll~---~g~~~~~~~~~~g~t~L~~A~~~~~-  631 (710)
                      |+++|++++..+.              .|.||||+|+.. |+.+++++|++   +|++++.++ ..|+||||+|+..|+ 
T Consensus       120 Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~-g~~~~v~~Ll~~~~~gad~~~~d-~~g~tpLh~A~~~~~~  197 (273)
T 2pnn_A          120 LVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACT-NQLAIVKFLLQNSWQPADISARD-SVGNTVLHALVEVADN  197 (273)
T ss_dssp             HHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHT-TCHHHHHHHHHCSSCCCCTTCCC-TTSCCHHHHHHHHCCS
T ss_pred             HHHCCCCcCccccccccccccccccccCCCCHHHHHHHc-CCHHHHHHHHhcccCCCCceeeC-CCCCcHHHHHHHccCc
Confidence            9999999999987              799999999999 99999999999   999999999 999999999999888 


Q ss_pred             --------hhHHHHHHhhhhccc-------cCCCCCCCchhhHHHHhhh---cccccceeeh-hHHHHhhhcccchhHH
Q psy15068        632 --------RDIIDLLHLIDNLFA-------SVTNPYDPNVYHRIELMNS---AKQLGLVHVF-EIMKVVKNYAGETLIG  691 (710)
Q Consensus       632 --------~~~v~~Ll~~g~~~~-------~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~-~~~~~~~~~~G~t~l~  691 (710)
                              .+++++|+++|+++|       .+|..|+||| |+|+..|+   +++| +++|| |+  ......+.+|-+
T Consensus       198 ~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL-~~A~~~g~~~iv~~L-l~~ga~dp--~~~~~~~~~~~~  272 (273)
T 2pnn_A          198 TVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPL-ALAASSGKIGVLAYI-LQREIHEP--ECRHAAAHHHHH  272 (273)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHH-HHHHHTTCHHHHHHH-HHHHTC----------------
T ss_pred             chhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHH-HHHHHhChHHHHHHH-HHCCCCCc--hhhhhhhhhccC
Confidence                    799999999999997       4899999999 99999999   9999 99999 88  777777777654

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.98  E-value=3.1e-31  Score=242.48  Aligned_cols=192  Identities=20%  Similarity=0.296  Sum_probs=154.3

Q ss_pred             ccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhc
Q psy15068         54 SVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYL  133 (710)
Q Consensus        54 ~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~  133 (710)
                      ..+.||||.|+..|+.+.++.|+..+..+++..+..|+||||+|+..|+.+++++|++.|++++..+..|.||||+|+..
T Consensus         3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~   82 (201)
T 3hra_A            3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQ   82 (201)
T ss_dssp             CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence            35779999999999999999999998878999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHH-hCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcC-CCcccCCCCCCCCHHHHHHHhCC---
Q psy15068        134 GNKNIVKFLL-SKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENG-ANVREKMPFTDFSPLHFAVVKKN---  208 (710)
Q Consensus       134 g~~~iv~~Ll-~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~-~~~~~~~~~~~~~~l~~A~~~~~---  208 (710)
                      |+.+++++|+ ..+++++..+..|.||||+|+..+      +.+++++|+++| ++++..+. .|.||||.|+..++   
T Consensus        83 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~------~~~~v~~Ll~~g~~~~~~~~~-~g~t~L~~A~~~~~~~~  155 (201)
T 3hra_A           83 GRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKG------HIDNVKLLLEDGREDIDFQND-FGYTALIEAVGLREGNQ  155 (201)
T ss_dssp             TCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTT------CHHHHHHHHHHCCCCTTCCCT-TSCCHHHHHHHSSCCSH
T ss_pred             CCHHHHHHHHhccCcccccccCCCCcHHHHHHHcC------CHHHHHHHHHcCCCCcCCCCC-CCCCHHHHHHHhccchh
Confidence            9999999999 566788888888888888888877      777788877777 66666666 77777777777665   


Q ss_pred             --HHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy15068        209 --LSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKR  286 (710)
Q Consensus       209 --~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~  286 (710)
                        .+++++|+++|++++                                   ..+..|.|||++|+..|+.+++++|+++
T Consensus       156 ~~~~~v~~Ll~~ga~~~-----------------------------------~~~~~g~t~l~~A~~~~~~~~~~~Ll~~  200 (201)
T 3hra_A          156 LYQDIVKLLMENGADQS-----------------------------------IKDNSGRTAMDYANQKGYTEISKILAQY  200 (201)
T ss_dssp             HHHHHHHHHHHTTCCTT-----------------------------------CCCTTSCCHHHHHHHHTCHHHHHHHHTC
T ss_pred             hHHHHHHHHHHCCCCCC-----------------------------------ccCCCCCCHHHHHHHcCCHhHHHHHHhc
Confidence              566666666555554                                   4455555666666666666666666655


Q ss_pred             C
Q psy15068        287 K  287 (710)
Q Consensus       287 g  287 (710)
                      |
T Consensus       201 G  201 (201)
T 3hra_A          201 N  201 (201)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.97  E-value=3.8e-32  Score=261.40  Aligned_cols=212  Identities=22%  Similarity=0.307  Sum_probs=167.1

Q ss_pred             ccccccccchhhhhhcChhhHHHHHHhhh----ccCC----CccccchhHHHHHHhc---CCHHHHHHHHhcCCCC----
Q psy15068         18 KESSYRHHHLFSEIMFSEEDAFGYFLQGI----INSS----SAKSVELTLLCSAVWD---NKIREVEFLLSTGDHD----   82 (710)
Q Consensus        18 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~----~~~~----~~~~~~~t~L~~A~~~---g~~~~v~~Ll~~~~~~----   82 (710)
                      .....+.|+|+.|+..|+.++|++|++.+    .+++    ..+..|.||||.|+..   |+.++|++|++.|+ +    
T Consensus         8 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga-~~~~~   86 (273)
T 2pnn_A            8 PPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVAR-KTDSL   86 (273)
T ss_dssp             ---CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHH-HTTCH
T ss_pred             CCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhc-cccch
Confidence            35567889999999999999999988754    3443    3577899999999986   99999999999876 3    


Q ss_pred             ---Cc----cccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCC--------------CCCCHHHHHHhcCCHHHHHH
Q psy15068         83 ---VN----EKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDE--------------KGYTPLHLACYLGNKNIVKF  141 (710)
Q Consensus        83 ---~~----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~--------------~~~t~L~~A~~~g~~~iv~~  141 (710)
                         ++    ..|..|+||||+|+..|+.+++++|+++|++++..+.              .|.||||+|+..|+.++|++
T Consensus        87 ~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~  166 (273)
T 2pnn_A           87 KQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKF  166 (273)
T ss_dssp             HHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHH
T ss_pred             hHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHH
Confidence               22    2566899999999999999999999999999998887              79999999999999999999


Q ss_pred             HHh---CCCCccccccCCCchhHHhhhccCCCCCC---HHHHHHHHHHcCCCccc-------CCCCCCCCHHHHHHHhCC
Q psy15068        142 LLS---KKADVRAKCSMMVTPILAVSANMSEDSTD---TNEIISMLIENGANVRE-------KMPFTDFSPLHFAVVKKN  208 (710)
Q Consensus       142 Ll~---~g~~~~~~~~~~~~~l~~a~~~~~~~~~~---~~~~~~~Ll~~~~~~~~-------~~~~~~~~~l~~A~~~~~  208 (710)
                      |++   +|++++.++..|.||||+|+..+......   ..+++++|+++|++++.       .+. .|.|||++|+..|+
T Consensus       167 Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~-~g~TpL~~A~~~g~  245 (273)
T 2pnn_A          167 LLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNR-KGLTPLALAASSGK  245 (273)
T ss_dssp             HHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCT-TSCCHHHHHHHTTC
T ss_pred             HHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCC-CCCCHHHHHHHhCh
Confidence            999   89999999999999999999877110000   07889999999988864       444 89999999999999


Q ss_pred             HHHHHHHHhCCC-CcchhhccCCC
Q psy15068        209 LSVVELLIKCKA-DTNLIVKVNQE  231 (710)
Q Consensus       209 ~~~v~~Ll~~g~-~~~~~~~~~~~  231 (710)
                      .+++++|+++|+ ++......+..
T Consensus       246 ~~iv~~Ll~~ga~dp~~~~~~~~~  269 (273)
T 2pnn_A          246 IGVLAYILQREIHEPECRHAAAHH  269 (273)
T ss_dssp             HHHHHHHHHHHTC-----------
T ss_pred             HHHHHHHHHCCCCCchhhhhhhhh
Confidence            999999999998 66555444443

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.97  E-value=7.6e-33  Score=256.30  Aligned_cols=200  Identities=16%  Similarity=0.085  Sum_probs=173.8

Q ss_pred             HHHHHHcCCCCCchh-hccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCc
Q psy15068        475 VKELQNYGAQIDKEN-YLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGS  553 (710)
Q Consensus       475 v~~Ll~~~~~~~~~~-~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t  553 (710)
                      ++.|+++|++++..+ ....+.++  +|.|                      +..++.+++++|++.|++++.++..|.|
T Consensus         1 v~~ll~~~~~~~~~~~~~~~~~t~--L~~A----------------------~~~g~~~~v~~Ll~~g~~~~~~d~~g~t   56 (229)
T 2vge_A            1 MRSVLRKAGSPRKARRARLNPLVL--LLDA----------------------ALTGELEVVQQAVKEMNDPSQPNEEGIT   56 (229)
T ss_dssp             ---------CCCCCCCTTSCHHHH--HHHH----------------------HHHTCHHHHHHHHHHSSCTTCCCTTSCC
T ss_pred             CeehhccCCCCccccccccchhHH--HHHH----------------------HHcCCHHHHHHHHhcCCCCCCCCCCCCC
Confidence            456788888765433 12567778  9999                      9999999999999999999999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHH--HhCCC
Q psy15068        554 ALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHA--EAGKN  631 (710)
Q Consensus       554 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A--~~~~~  631 (710)
                      |||+|+..|+.+++++|+++|++++.+|..|+||||+|+.. |+.+++++|+++|++++..++..|.||||+|  +..|+
T Consensus        57 pLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~-g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~  135 (229)
T 2vge_A           57 ALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASC-NDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGY  135 (229)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT-TCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTH
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcCh
Confidence            99999999999999999999999999999999999999999 9999999999999999999757999999999  99999


Q ss_pred             hhHHHHHHhhhhccccCCCCCCCchhhHHHHhhhcccccceeehhHHHHhhhcccchhHHHHhhhchhHH
Q psy15068        632 RDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYSFL  701 (710)
Q Consensus       632 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~~~~L~~~~g~~~~~~~~~~~G~t~l~~a~~~~~~~~  701 (710)
                      .+++++|+++|++++.+|..|.||+ +.++.....++| ++.|+++..+.+|..|.||||+|+++|+.++
T Consensus       136 ~~~v~~Ll~~ga~~~~~~~~~~~~l-~~~~~~~~~~~l-l~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~  203 (229)
T 2vge_A          136 ADCATYLADVEQSMGLMNSGAVYAL-WDYSAEFGDELS-FREGESVTVLRRDGPEETDWWWAALHGQEGY  203 (229)
T ss_dssp             HHHHHHHHHHHHHTTTSGGGEEEES-SCBCCSSTTBCC-BCTTCEEEEEESSCTTCSSEEEEEETTEEEE
T ss_pred             HHHHHHHHHcCCCcccccCCchHHH-HHHhhccccccC-ccccccccccccCCCcccHHHHHHHcCCcce
Confidence            9999999999999999999999999 766666568999 9999983227889999999999999998653

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.97  E-value=1e-31  Score=256.64  Aligned_cols=203  Identities=19%  Similarity=0.159  Sum_probs=176.3

Q ss_pred             cccCCHHHHHHHccCcHHH----HHHHHHCCCCCCCCC---CCCCCCHHHHHH---HcCCHhHHHHHHHcCCCCCchhhc
Q psy15068        422 FCFRSALQYACKHKNNIEM----VKLLLLHGADVNDTS---NKPKQKPLAVAI---QSGDFQIVKELQNYGAQIDKENYL  491 (710)
Q Consensus       422 ~~~~t~l~~A~~~~~~~~~----~~~Ll~~~~~~~~~~---~~~~~t~L~~A~---~~~~~~~v~~Ll~~~~~~~~~~~~  491 (710)
                      .+++++|+.|+.. |+.+.    +++|++.|.+++...   +..|.||||+|+   ..|+.+++++|++.|++.....  
T Consensus         3 ~~~~~~L~~A~~~-g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~--   79 (260)
T 3jxi_A            3 VFNRPILFDIVSR-GSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMR--   79 (260)
T ss_dssp             CCCHHHHHHHHHH-TCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHH--
T ss_pred             cchHHHHHHHHHh-CCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchH--
Confidence            3488999999999 99995    555556999988661   267999999999   7799999999999886543221  


Q ss_pred             cchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHH
Q psy15068        492 KNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLL  571 (710)
Q Consensus       492 ~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll  571 (710)
                                                                  .++  ...++..+..|.||||+|+..|+.+++++|+
T Consensus        80 --------------------------------------------~~~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll  113 (260)
T 3jxi_A           80 --------------------------------------------EFI--NSPFRDVYYRGQTALHIAIERRCKHYVELLV  113 (260)
T ss_dssp             --------------------------------------------HHH--TCCBCCSSEESBCHHHHHHHTTCHHHHHHHH
T ss_pred             --------------------------------------------hhh--cccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence                                                        001  1335556678999999999999999999999


Q ss_pred             HcCCCCcccC--------------CCCCcHHHHHHhcCCchHHHHHHHH---cCCCCCCCCCCCCCCHhHHHHhCCC---
Q psy15068        572 DNGADVNFKS--------------ATGFTALHMACRFHSNDNIVRKLLH---HGAYYDMKDGKTGKTPLKHAEAGKN---  631 (710)
Q Consensus       572 ~~g~~~~~~~--------------~~g~t~L~~A~~~~~~~~~v~~Ll~---~g~~~~~~~~~~g~t~L~~A~~~~~---  631 (710)
                      ++|++++..+              ..|.||||+|+.. |+.+++++|++   +|++++.++ ..|+||||+|+..++   
T Consensus       114 ~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~-g~~~~v~~Ll~~~~~ga~~~~~d-~~g~TpLh~A~~~~~~~~  191 (260)
T 3jxi_A          114 EKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACT-NQPHIVHYLTENGHKQADLRRQD-SRGNTVLHALVAIADNTR  191 (260)
T ss_dssp             HTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHT-TCHHHHHHHHHCSSCCCCTTCCC-TTSCCHHHHHHHHCCSSH
T ss_pred             hCCCCcCccccccccCcccccccccCCCCHHHHHHHc-CCHHHHHHHHhccccCCCCcccC-CCCCcHHHHHHHhccCch
Confidence            9999999998              6899999999999 99999999999   999999999 999999999998777   


Q ss_pred             ------hhHHHHHHhhhhcc-------ccCCCCCCCchhhHHHHhhh---cccccceeehhH
Q psy15068        632 ------RDIIDLLHLIDNLF-------ASVTNPYDPNVYHRIELMNS---AKQLGLVHVFEI  677 (710)
Q Consensus       632 ------~~~v~~Ll~~g~~~-------~~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~~~  677 (710)
                            .+++++|+++|+++       +.+|..|+||| |+|+..|+   +++| +++|++.
T Consensus       192 ~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL-~~A~~~g~~~~v~~L-l~~g~~~  251 (260)
T 3jxi_A          192 ENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPL-MMAAKTGKIGIFQHI-IRREIAD  251 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHH-HHHHHTTCHHHHHHH-HHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHH-HHHHHcCCHHHHHHH-HHhCCCc
Confidence                  69999999999999       78999999999 99999999   9999 9999988

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.97  E-value=2.1e-31  Score=254.50  Aligned_cols=202  Identities=22%  Similarity=0.261  Sum_probs=175.2

Q ss_pred             cccccchhhhhhcChhhHHHHHHh----hhccCCCcc----ccchhHHHHHH---hcCCHHHHHHHHhcCC---------
Q psy15068         21 SYRHHHLFSEIMFSEEDAFGYFLQ----GIINSSSAK----SVELTLLCSAV---WDNKIREVEFLLSTGD---------   80 (710)
Q Consensus        21 ~~~~~~l~~a~~~~~~~~~~~ll~----~~~~~~~~~----~~~~t~L~~A~---~~g~~~~v~~Ll~~~~---------   80 (710)
                      .++.++|+.|+..|+.+.++.|++    .|.+++..+    ..|.||||.|+   ..|+.++|++|++.++         
T Consensus         3 ~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~   82 (260)
T 3jxi_A            3 VFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFI   82 (260)
T ss_dssp             CCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHH
T ss_pred             cchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhh
Confidence            357799999999999996555555    999998776    66999999999   7799999999999875         


Q ss_pred             -CCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCC--------------CCCCCHHHHHHhcCCHHHHHHHHh-
Q psy15068         81 -HDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRD--------------EKGYTPLHLACYLGNKNIVKFLLS-  144 (710)
Q Consensus        81 -~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--------------~~~~t~L~~A~~~g~~~iv~~Ll~-  144 (710)
                       ..++..|..|+||||+|+..|+.+++++|+++|++++..+              ..|.||||+|+..|+.++|++|++ 
T Consensus        83 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~  162 (260)
T 3jxi_A           83 NSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTEN  162 (260)
T ss_dssp             TCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred             cccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence             1345556699999999999999999999999999999998              689999999999999999999999 


Q ss_pred             --CCCCccccccCCCchhHHhhhccCCCCC---CHHHHHHHHHHcCCCc-------ccCCCCCCCCHHHHHHHhCCHHHH
Q psy15068        145 --KKADVRAKCSMMVTPILAVSANMSEDST---DTNEIISMLIENGANV-------REKMPFTDFSPLHFAVVKKNLSVV  212 (710)
Q Consensus       145 --~g~~~~~~~~~~~~~l~~a~~~~~~~~~---~~~~~~~~Ll~~~~~~-------~~~~~~~~~~~l~~A~~~~~~~~v  212 (710)
                        +|++++.++..|.||||+|+..+.....   ...+++++|+++|+++       +..+. .|.|||++|+..|+.+++
T Consensus       163 ~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~-~g~tpL~~A~~~g~~~~v  241 (260)
T 3jxi_A          163 GHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNN-DGLSPLMMAAKTGKIGIF  241 (260)
T ss_dssp             SSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCT-TSCCHHHHHHHTTCHHHH
T ss_pred             cccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccC-CCCCHHHHHHHcCCHHHH
Confidence              9999999999999999999987721100   0168999999999988       45666 999999999999999999


Q ss_pred             HHHHhCCCCcc
Q psy15068        213 ELLIKCKADTN  223 (710)
Q Consensus       213 ~~Ll~~g~~~~  223 (710)
                      ++|+++|++..
T Consensus       242 ~~Ll~~g~~~~  252 (260)
T 3jxi_A          242 QHIIRREIADA  252 (260)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHhCCCcc
Confidence            99999987654

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.97  E-value=6.9e-30  Score=244.60  Aligned_cols=189  Identities=20%  Similarity=0.203  Sum_probs=163.7

Q ss_pred             ccchhhhhhcChhhHHHHHHhhhcc--CCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHH---
Q psy15068         24 HHHLFSEIMFSEEDAFGYFLQGIIN--SSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAI---   98 (710)
Q Consensus        24 ~~~l~~a~~~~~~~~~~~ll~~~~~--~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~---   98 (710)
                      .++++.|+..++.+.++.+++.+.+  +|..|..|.||||+|+..|+.++|++|++.|+.+++..+..|+||||+|+   
T Consensus        77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~  156 (276)
T 4hbd_A           77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALAT  156 (276)
T ss_dssp             STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCC
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHH
Confidence            4677888888888888888887766  88888889999999999999999999999887788888888999999888   


Q ss_pred             --HcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHH
Q psy15068         99 --LQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNE  176 (710)
Q Consensus        99 --~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~  176 (710)
                        ..++.+++++|++.|...+..+..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..+      +.+
T Consensus       157 ~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g------~~~  230 (276)
T 4hbd_A          157 LKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHG------HKE  230 (276)
T ss_dssp             CCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT------CHH
T ss_pred             hhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCC------CHH
Confidence              668888899999888888888888889999999999999999999999988888888888888888888      888


Q ss_pred             HHHHHHH-cCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCC
Q psy15068        177 IISMLIE-NGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCK  219 (710)
Q Consensus       177 ~~~~Ll~-~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g  219 (710)
                      ++++|++ .|++++..+. .|.|||++|+..|+.+++++|++++
T Consensus       231 iv~~Ll~~~gad~~~~d~-~g~TpL~~A~~~g~~~iv~~Ll~~~  273 (276)
T 4hbd_A          231 IAGLLLAVPSCDISLTDR-DGSTALMVALDAGQSEIASMLYSRM  273 (276)
T ss_dssp             HHHHHHTSTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred             HHHHHHhcCCCCCcCcCC-CCCCHHHHHHHcCCHHHHHHHHhcc
Confidence            8888888 7888888777 8888888888888888888888764

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.97  E-value=1.2e-29  Score=223.99  Aligned_cols=156  Identities=29%  Similarity=0.374  Sum_probs=81.1

Q ss_pred             ccccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcC
Q psy15068         22 YRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQG  101 (710)
Q Consensus        22 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g  101 (710)
                      ...++|+.|+..|+.+++++|+++|++++..|..|.||||.|+..|+.+++++|+++|+ +++..+..|+||||+|+..|
T Consensus        13 ~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~   91 (169)
T 2y1l_E           13 DLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGA-DVNAVDHAGMTPLRLAALFG   91 (169)
T ss_dssp             CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTT
T ss_pred             cccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCccCCCCCCHHHHHHHcC
Confidence            33445555555555555555555555555555555555555555555555555555555 55555555555555555555


Q ss_pred             cHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHH
Q psy15068        102 LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISML  181 (710)
Q Consensus       102 ~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~L  181 (710)
                      +.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||+++|+..+      +.+++++|
T Consensus        92 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~------~~~~~~~L  165 (169)
T 2y1l_E           92 HLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNG------NEDLAEIL  165 (169)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhC------CHHHHHHH
Confidence            555555555555555555555555555555555555555555555555544444444444444444      44444444


Q ss_pred             HHc
Q psy15068        182 IEN  184 (710)
Q Consensus       182 l~~  184 (710)
                      ++.
T Consensus       166 ~~~  168 (169)
T 2y1l_E          166 QKL  168 (169)
T ss_dssp             HTC
T ss_pred             HHc
Confidence            443

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.96  E-value=1.6e-29  Score=228.83  Aligned_cols=163  Identities=25%  Similarity=0.302  Sum_probs=147.4

Q ss_pred             CCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHH
Q psy15068         49 SSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLH  128 (710)
Q Consensus        49 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~  128 (710)
                      ++.+|..|.||||.|+..|+.+++++|++.++ +++.++..|+||||+|+..|+.+++++|++.|++++..|..|.||||
T Consensus        28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~  106 (192)
T 2rfm_A           28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFD-KLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLM  106 (192)
T ss_dssp             HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHH
T ss_pred             HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcc-ccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHH
Confidence            56778889999999999999999999999988 88999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCC
Q psy15068        129 LACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKN  208 (710)
Q Consensus       129 ~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~  208 (710)
                      +|+..|+.+++++|+++|++++.++..|.||||+|+..+      +.+++++|+++|++++..+. .|.||++.|+..|+
T Consensus       107 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~A~~~~~  179 (192)
T 2rfm_A          107 WSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYG------RSEIVKKLLELGADISARDL-TGLTAEASARIFGR  179 (192)
T ss_dssp             HHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHT------CHHHHHHHHHTTCCTTCBCT-TSCBHHHHHHHTTC
T ss_pred             HHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC------CHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHhCc
Confidence            999999999999999999999999999999999999988      88999999999998888877 88899999999999


Q ss_pred             HHHHHHHHhCC
Q psy15068        209 LSVVELLIKCK  219 (710)
Q Consensus       209 ~~~v~~Ll~~g  219 (710)
                      .+++++|++.|
T Consensus       180 ~~~v~~Ll~~~  190 (192)
T 2rfm_A          180 QEVIKIFTEVR  190 (192)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHhcc
Confidence            99999998754

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.96  E-value=8.2e-29  Score=218.62  Aligned_cols=159  Identities=31%  Similarity=0.402  Sum_probs=151.3

Q ss_pred             cccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHh
Q psy15068         53 KSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACY  132 (710)
Q Consensus        53 ~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~  132 (710)
                      ...+.|+|+.|++.|+.++|++|+++|+ +++.++..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+.
T Consensus        11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~   89 (169)
T 2y1l_E           11 GSDLGKKLLEAARAGRDDEVRILMANGA-DVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAAL   89 (169)
T ss_dssp             --CHHHHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCcccchHHHHHHcCCHHHHHHHHHCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence            4467899999999999999999999999 999999999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHH
Q psy15068        133 LGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVV  212 (710)
Q Consensus       133 ~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v  212 (710)
                      .|+.+++++|+++|++++..+..|.||||+|+..+      +.+++++|+++|++++..+. .|.||++.|+..|+.+++
T Consensus        90 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~~~~~~~~~  162 (169)
T 2y1l_E           90 FGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFG------HLEIVEVLLKNGADVNAQDK-FGKTAFDISIDNGNEDLA  162 (169)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHH
T ss_pred             cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC------CHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHhCCHHHH
Confidence            99999999999999999999999999999999999      99999999999999988887 899999999999999999


Q ss_pred             HHHHhCC
Q psy15068        213 ELLIKCK  219 (710)
Q Consensus       213 ~~Ll~~g  219 (710)
                      ++|++.|
T Consensus       163 ~~L~~~G  169 (169)
T 2y1l_E          163 EILQKLN  169 (169)
T ss_dssp             HHHHTC-
T ss_pred             HHHHHcC
Confidence            9999876

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.96  E-value=1.5e-29  Score=224.55  Aligned_cols=166  Identities=20%  Similarity=0.209  Sum_probs=89.0

Q ss_pred             hhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCH
Q psy15068         57 LTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNK  136 (710)
Q Consensus        57 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~  136 (710)
                      .||||.|+..|+.+++++|++.++..++.++..|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.
T Consensus         3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~   82 (172)
T 3v30_A            3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYT   82 (172)
T ss_dssp             -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred             hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCH
Confidence            35555555555555555555555522455555555555555555555555555555555555555555555555555555


Q ss_pred             HHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHH
Q psy15068        137 NIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLI  216 (710)
Q Consensus       137 ~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll  216 (710)
                      +++++|+++|++++..+..|.||||+|+..+      +.+++++|+++|++++..+. .|.|||+.|+..|+.+++++|+
T Consensus        83 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~A~~~~~~~~~~~L~  155 (172)
T 3v30_A           83 DIVGLLLERDVDINIYDWNGGTPLLYAVRGN------HVKCVEALLARGADLTTEAD-SGYTPMDLAVALGYRKVQQVIE  155 (172)
T ss_dssp             HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC------CHHHHHHHHHcCCCccccCC-CCCCHHHHHHHhCcHHHHHHHH
Confidence            5555555555555555555555555555555      55555555555555555444 5555555555555555555555


Q ss_pred             hCCCCcchhhccC
Q psy15068        217 KCKADTNLIVKVN  229 (710)
Q Consensus       217 ~~g~~~~~~~~~~  229 (710)
                      ++|++....+..+
T Consensus       156 ~~~~~~~~~~~~~  168 (172)
T 3v30_A          156 NHILKLFQSNLVP  168 (172)
T ss_dssp             HHHHHHSCC----
T ss_pred             HHHHHHhcccCCC
Confidence            5555444443333

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.96  E-value=1.5e-29  Score=222.26  Aligned_cols=141  Identities=23%  Similarity=0.213  Sum_probs=70.2

Q ss_pred             cchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHH
Q psy15068         25 HHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYK  104 (710)
Q Consensus        25 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~  104 (710)
                      ++|+.|+..|+.+++++|+++|++++..+..|.||||.|+. |+.+++++|++.|+ +++.++..|+||||+|+..|+.+
T Consensus         7 ~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~   84 (162)
T 1ihb_A            7 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGA-NPDLKDRTGFAVIHDAARAGFLD   84 (162)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHHTCHH
T ss_pred             hHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCC-CCCCCCCCCCCHHHHHHHcCCHH
Confidence            44555555555555555555555555555555555555544 55555555555544 45555555555555555555555


Q ss_pred             HHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCC-ccccccCCCchhHHhhhcc
Q psy15068        105 MVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKAD-VRAKCSMMVTPILAVSANM  167 (710)
Q Consensus       105 ~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~-~~~~~~~~~~~l~~a~~~~  167 (710)
                      ++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++ ++..+..|.|||++|+..+
T Consensus        85 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~  148 (162)
T 1ihb_A           85 TLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYG  148 (162)
T ss_dssp             HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTT
T ss_pred             HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcC
Confidence            55555555555555555555555555555555555555554444 2444444444444444444

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.96  E-value=2.8e-29  Score=222.76  Aligned_cols=169  Identities=22%  Similarity=0.172  Sum_probs=155.7

Q ss_pred             cccchhhhhhcChhhHHHHHHhhhcc-CCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcC
Q psy15068         23 RHHHLFSEIMFSEEDAFGYFLQGIIN-SSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQG  101 (710)
Q Consensus        23 ~~~~l~~a~~~~~~~~~~~ll~~~~~-~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g  101 (710)
                      ..+||+.|+..|+.+++++|++.+.. ++..+..|.||||.|+..|+.++|++|++.|+ +++.++..|+||||+|+..|
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~   80 (172)
T 3v30_A            2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGA-DPHILAKERESALSLASTGG   80 (172)
T ss_dssp             --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC-CTTCCCTTCCCHHHHHHHTT
T ss_pred             chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CchhhcccCCCHHHHHHHCC
Confidence            45899999999999999999999877 88999999999999999999999999999999 99999999999999999999


Q ss_pred             cHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHH
Q psy15068        102 LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISML  181 (710)
Q Consensus       102 ~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~L  181 (710)
                      +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.|||++|+..+      +.+++++|
T Consensus        81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~------~~~~~~~L  154 (172)
T 3v30_A           81 YTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALG------YRKVQQVI  154 (172)
T ss_dssp             CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT------CHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhC------cHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999999999      99999999


Q ss_pred             HHcCCCcccCCCCCCCCH
Q psy15068        182 IENGANVREKMPFTDFSP  199 (710)
Q Consensus       182 l~~~~~~~~~~~~~~~~~  199 (710)
                      +++++++..++. .+.||
T Consensus       155 ~~~~~~~~~~~~-~~~~p  171 (172)
T 3v30_A          155 ENHILKLFQSNL-VPADP  171 (172)
T ss_dssp             HHHHHHHSCC--------
T ss_pred             HHHHHHHhcccC-CCCCC
Confidence            999988877655 55444

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.96  E-value=2.9e-30  Score=242.01  Aligned_cols=210  Identities=14%  Similarity=0.073  Sum_probs=155.1

Q ss_pred             CCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHH
Q psy15068        456 NKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVK  535 (710)
Q Consensus       456 ~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  535 (710)
                      +..|.|||+.|+..+..++++.|+++|++++..   ..+.++  +|.|                      +..++.++++
T Consensus         2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~---~~~~t~--L~~A----------------------~~~g~~~~v~   54 (239)
T 1ycs_B            2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN---PLPLAL--LLDS----------------------SLEGEFDLVQ   54 (239)
T ss_dssp             --------------------------------------CHHH--HHHH----------------------HHHTCHHHHH
T ss_pred             CccccccCchhhhhhhHHHHHHHhccCCCcccC---chhhHH--HHHH----------------------HHcCCHHHHH
Confidence            345778888888888888888888888777643   556777  7777                      7778888888


Q ss_pred             HHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCC
Q psy15068        536 KNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKD  615 (710)
Q Consensus       536 ~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~  615 (710)
                      +|++.|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.. ++.+++++|+++|++++..+
T Consensus        55 ~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~-~~~~~v~~Ll~~ga~~~~~~  133 (239)
T 1ycs_B           55 RIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASC-NNVQVCKFLVESGAAVFAMT  133 (239)
T ss_dssp             HHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHT-TCHHHHHHHHHTTCCTTCCC
T ss_pred             HHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCcceec
Confidence            88888888889999999999999999999999999999999999999999999999999 99999999999999999999


Q ss_pred             CCCCC-CHhHHH--HhCCChhHHHHHHhhhhccccC---------CCCCCCchhhHHHHhhh-cccccceeehh---HH-
Q psy15068        616 GKTGK-TPLKHA--EAGKNRDIIDLLHLIDNLFASV---------TNPYDPNVYHRIELMNS-AKQLGLVHVFE---IM-  678 (710)
Q Consensus       616 ~~~g~-t~L~~A--~~~~~~~~v~~Ll~~g~~~~~~---------~~~g~t~L~~~A~~~~~-~~~L~~~~g~~---~~-  678 (710)
                       ..|. ||||+|  +..|+.+++++|+++|++++..         +..|.||+ ++|...|. +++| ...+.+   .+ 
T Consensus       134 -~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~-eLa~~~G~~i~vl-~~~~~~~~~Ww~  210 (239)
T 1ycs_B          134 -YSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDD-ELPMKEGDCMTII-HREDEDEIEWWW  210 (239)
T ss_dssp             -SSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTT-BCCBCSSCEEEEC-CCCTTSCSSEEE
T ss_pred             -CCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCC-cccccCCCEEEEE-EecCCCCCCEEE
Confidence             5555 999999  7889999999999999998886         67799999 99999999 8888 777766   21 


Q ss_pred             HHhhhcccchhHHHHhhh
Q psy15068        679 KVVKNYAGETLIGVARKM  696 (710)
Q Consensus       679 ~~~~~~~G~t~l~~a~~~  696 (710)
                      ....+..|.+|.++....
T Consensus       211 ~~~~~~~G~~P~~yv~~~  228 (239)
T 1ycs_B          211 ARLNDKEGYVPRNLLGLY  228 (239)
T ss_dssp             EEETTEEEEEEGGGEECC
T ss_pred             EEECCcEEEeehHHeeEC
Confidence            145688899999987544

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.96  E-value=3.4e-29  Score=226.58  Aligned_cols=160  Identities=33%  Similarity=0.384  Sum_probs=155.7

Q ss_pred             cccccccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHH
Q psy15068         19 ESSYRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAI   98 (710)
Q Consensus        19 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~   98 (710)
                      +...+.|||+.|+..|+.+++++|+++|.+++..+..|.||||.|+..|+.+++++|++.|+ +++.++..|+||||+|+
T Consensus        31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~  109 (192)
T 2rfm_A           31 RDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGS-NVNTKDFSGKTPLMWSI  109 (192)
T ss_dssp             CCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC-CTTCCCTTSCCHHHHHH
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCC-CCCCCCCCCCcHHHHHH
Confidence            46678999999999999999999999999999999999999999999999999999999999 99999999999999999


Q ss_pred             HcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHH
Q psy15068         99 LQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEII  178 (710)
Q Consensus        99 ~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~  178 (710)
                      ..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.||+++|+..+      +.+++
T Consensus       110 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~------~~~~v  183 (192)
T 2rfm_A          110 IFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFG------RQEVI  183 (192)
T ss_dssp             HHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTT------CHHHH
T ss_pred             HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhC------cHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999999999999      99999


Q ss_pred             HHHHHcC
Q psy15068        179 SMLIENG  185 (710)
Q Consensus       179 ~~Ll~~~  185 (710)
                      ++|++.+
T Consensus       184 ~~Ll~~~  190 (192)
T 2rfm_A          184 KIFTEVR  190 (192)
T ss_dssp             HHHHHHH
T ss_pred             HHHHhcc
Confidence            9999864

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.96  E-value=4.1e-29  Score=220.44  Aligned_cols=158  Identities=22%  Similarity=0.155  Sum_probs=107.7

Q ss_pred             cccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCc
Q psy15068         23 RHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGL  102 (710)
Q Consensus        23 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~  102 (710)
                      +.|||+.|+..|+.+++++|++.|.+++..|..|.||||.|+..|+.+++++|++.|+ +++..+..|.||||+|+..|+
T Consensus         3 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~   81 (167)
T 3v31_A            3 NSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGA-DPQLLGKGRESALSLACSKGY   81 (167)
T ss_dssp             TCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTCCCHHHHHHHHTC
T ss_pred             CcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCC-CCCCcCCCCCcHHHHHHHcCC
Confidence            4566677777777777777776666666666666677777777777777777776666 666666666677777777777


Q ss_pred             HHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHH
Q psy15068        103 YKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLI  182 (710)
Q Consensus       103 ~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll  182 (710)
                      .+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||+++|+..+      +.+++++|+
T Consensus        82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~------~~~~~~~L~  155 (167)
T 3v31_A           82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALG------YRSVQQVIE  155 (167)
T ss_dssp             HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT------CHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC------cHHHHHHHH
Confidence            77777777666666666666677777777767777777777666666666666666666666666      666666666


Q ss_pred             HcCCC
Q psy15068        183 ENGAN  187 (710)
Q Consensus       183 ~~~~~  187 (710)
                      +++.+
T Consensus       156 ~~~~~  160 (167)
T 3v31_A          156 SHLLK  160 (167)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            65543

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.96  E-value=5.6e-32  Score=267.11  Aligned_cols=262  Identities=11%  Similarity=0.046  Sum_probs=185.9

Q ss_pred             cchhhhhh-cChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCC--ccccCCCCcHHHHHHHcC
Q psy15068         25 HHLFSEIM-FSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDV--NEKLQDGRTALYMAILQG  101 (710)
Q Consensus        25 ~~l~~a~~-~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~--~~~~~~g~t~L~~A~~~g  101 (710)
                      ++++.|.. +++.+++++++++|.+       +.||||.|++.|+.++|++|++.++.+.  +..+..|.||||+|+..|
T Consensus        67 l~~~~a~~~~~~~~~~~~l~~~g~~-------~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G  139 (376)
T 2aja_A           67 LCLYYAHYNRNAKQLWSDAHKKGIK-------SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENG  139 (376)
T ss_dssp             HHHHHHHTTTTCTTHHHHHHHHTCC-------HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTT
T ss_pred             HHHHHHHhcCCCHHHHHHHHHcCCC-------cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcC
Confidence            46777766 6889999999987754       4699999999999999999999987221  234557889999999999


Q ss_pred             cHHHHHHHHHcCCCC---CCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccc--cccCCCchhHHhh-hccCCCCCCHH
Q psy15068        102 LYKMVTLLIHHGANV---NDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRA--KCSMMVTPILAVS-ANMSEDSTDTN  175 (710)
Q Consensus       102 ~~~~v~~Ll~~g~~~---~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~--~~~~~~~~l~~a~-~~~~~~~~~~~  175 (710)
                      +.++|++|+++|+++   +..+.. .||||+|+..|+.++|++|+++|++++.  .+..|.||||+|+ ..|      +.
T Consensus       140 ~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G------~~  212 (376)
T 2aja_A          140 HLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRG------HH  212 (376)
T ss_dssp             CHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTC------CH
T ss_pred             CHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCC------CH
Confidence            999999999999752   222223 8999999999999999999999999887  8889999999999 999      99


Q ss_pred             HHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCc-------------
Q psy15068        176 EIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNS-------------  242 (710)
Q Consensus       176 ~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~-------------  242 (710)
                      +++++|+++|+        .+.|||+.|+..|+.+++++|++.|++++..+..     ++.|+..|+             
T Consensus       213 eiv~~Ll~~ga--------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~~-----l~~A~~~g~~~vv~~~~~~~~~  279 (376)
T 2aja_A          213 NVINFLLDCPV--------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDA-----FKLSNPDGVFDLVTKSECLQGF  279 (376)
T ss_dssp             HHHHHHTTSHH--------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTT-----TTTTSSSSCCCCSSHHHHHHHH
T ss_pred             HHHHHHHhCCC--------ccchHHHHHHHCCCHHHHHHHHhcCcccccccHH-----HHHHHHCCChhhhcHHhhhhhH
Confidence            99999999774        3679999999999999999999999877654432     444444443             


Q ss_pred             --------------HHHHHHHHccCCCc----cccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHH
Q psy15068        243 --------------VKIVEAFLNSKNFD----VSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFA  304 (710)
Q Consensus       243 --------------~~~v~~lL~~~~~~----~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a  304 (710)
                                    .+.+++++....+.    .......+.|||++|+..|+.+++++|++.|   ...+..+.|++.+|
T Consensus       280 ~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~~---~v~~~~~~~~~~~~  356 (376)
T 2aja_A          280 YMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIP---SVLALTKANNYYIN  356 (376)
T ss_dssp             HHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSH---HHHHSCC-------
T ss_pred             HHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcCh---HHHHHHHHhccccc
Confidence                          34444222211110    0112234567888888888888888888764   44566678888888


Q ss_pred             HHhCCCcHHHHHHH
Q psy15068        305 IGMGRKHTHVAEYL  318 (710)
Q Consensus       305 ~~~~~~~~~~~~~L  318 (710)
                      -..|..  ++.+.-
T Consensus       357 ~~~~~~--~~~~~~  368 (376)
T 2aja_A          357 ETGGRL--DLRAVA  368 (376)
T ss_dssp             --------------
T ss_pred             cccccc--cHHHHH
Confidence            888877  555543

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.96  E-value=1.1e-29  Score=243.21  Aligned_cols=194  Identities=22%  Similarity=0.264  Sum_probs=162.7

Q ss_pred             cCCHHHHHHHccCcHHHHHHHHHCCCC--CCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCC-CCCchhhccchHHHHhh
Q psy15068        424 FRSALQYACKHKNNIEMVKLLLLHGAD--VNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGA-QIDKENYLKNKEAARIA  500 (710)
Q Consensus       424 ~~t~l~~A~~~~~~~~~~~~Ll~~~~~--~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~l  500 (710)
                      +++++|.|+.. ++.+.++.+++.+.+  ++.. +..|.||||+|+..|+.+++++|++.|+ +++..+  ..|.+|  +
T Consensus        76 ~~~~l~~a~~~-~~~~~~~~l~~~~~~~~~n~~-d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~--~~g~tp--L  149 (276)
T 4hbd_A           76 CRSDAHPELVR-RHLVTFRAMSARLLDYVVNIA-DSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQN--RAGYSP--I  149 (276)
T ss_dssp             HSTTCCHHHHH-HHHHHHHHHCHHHHHHHHTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCC--TTSCCH--H
T ss_pred             hccCCCHHHHH-HHHHHHHHHHHHHHhhcCcCC-CCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCC--CCCCCH--H
Confidence            56778888888 888888888877665  6666 8889999999999999999999999997 888877  778888  7


Q ss_pred             hhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccc
Q psy15068        501 HSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFK  580 (710)
Q Consensus       501 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~  580 (710)
                      |.|+...                 ....++.+++++|++.|.+.+..+..|.||||+|+..|+.+++++|+++|++++.+
T Consensus       150 ~~a~~~~-----------------~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~  212 (276)
T 4hbd_A          150 MLTALAT-----------------LKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQ  212 (276)
T ss_dssp             HHGGGCC-----------------CCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred             HHHHHHH-----------------hhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC
Confidence            7772100                 01567788888888888888888888899999999999999999999999999998


Q ss_pred             CCCCCcHHHHHHhcCCchHHHHHHHH-cCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhh
Q psy15068        581 SATGFTALHMACRFHSNDNIVRKLLH-HGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLID  642 (710)
Q Consensus       581 ~~~g~t~L~~A~~~~~~~~~v~~Ll~-~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g  642 (710)
                      |..|+||||+|+.. |+.+++++|++ .|++++.++ ..|.||||+|+..|+.+++++|++++
T Consensus       213 d~~G~TpLh~A~~~-g~~~iv~~Ll~~~gad~~~~d-~~g~TpL~~A~~~g~~~iv~~Ll~~~  273 (276)
T 4hbd_A          213 DDDGSTALMCACEH-GHKEIAGLLLAVPSCDISLTD-RDGSTALMVALDAGQSEIASMLYSRM  273 (276)
T ss_dssp             CTTSCCHHHHHHHH-TCHHHHHHHHTSTTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred             CCCCCCHHHHHHHC-CCHHHHHHHHhcCCCCCcCcC-CCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence            99999999999988 88999999998 789998888 88999999999999999999998863

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.96  E-value=7.7e-29  Score=217.65  Aligned_cols=158  Identities=23%  Similarity=0.217  Sum_probs=149.4

Q ss_pred             cchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcC
Q psy15068         55 VELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLG  134 (710)
Q Consensus        55 ~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g  134 (710)
                      ...||||.|+..|+.+++++|++.++ +++.++..|+||||+|+. |+.+++++|++.|++++.++..|.||||+|+..|
T Consensus         4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   81 (162)
T 1ihb_A            4 PWGNELASAAARGDLEQLTSLLQNNV-NVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAG   81 (162)
T ss_dssp             -CHHHHHHHHHHTCHHHHHHHTTSCC-CTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred             hHhhHHHHHHHcCCHHHHHHHHhCCC-CccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence            46799999999999999999999999 999999999999999999 9999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCc-ccCCCCCCCCHHHHHHHhCCHHHHH
Q psy15068        135 NKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANV-REKMPFTDFSPLHFAVVKKNLSVVE  213 (710)
Q Consensus       135 ~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~-~~~~~~~~~~~l~~A~~~~~~~~v~  213 (710)
                      +.+++++|+++|++++.++..|.||||+|+..+      +.+++++|+++|++. +..+. .|.|||+.|+..|+.++++
T Consensus        82 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~v~~Ll~~g~~~~~~~~~-~g~t~l~~A~~~~~~~~~~  154 (162)
T 1ihb_A           82 FLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEG------HLRVVEFLVKHTASNVGHRNH-KGDTACDLARLYGRNEVVS  154 (162)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHHSCCCTTCCCT-TSCCHHHHHHHTTCHHHHH
T ss_pred             CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC------CHHHHHHHHHccCCCCCCcCC-CCCcHHHHHHHcCCHHHHH
Confidence            999999999999999999999999999999999      999999999999984 66665 8999999999999999999


Q ss_pred             HHHhCCCC
Q psy15068        214 LLIKCKAD  221 (710)
Q Consensus       214 ~Ll~~g~~  221 (710)
                      +|+++|++
T Consensus       155 ~Ll~~GAd  162 (162)
T 1ihb_A          155 LMQANGAG  162 (162)
T ss_dssp             HHHHTC--
T ss_pred             HHHHhCCC
Confidence            99999975

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.96  E-value=1.8e-28  Score=218.93  Aligned_cols=166  Identities=20%  Similarity=0.238  Sum_probs=142.0

Q ss_pred             cccccchhhhhhcChhhHHHHHHhh-hccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHH
Q psy15068         21 SYRHHHLFSEIMFSEEDAFGYFLQG-IINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAIL   99 (710)
Q Consensus        21 ~~~~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~   99 (710)
                      +...++|+.|+..|+.+++++|++. +.+++..+..|.||||.|+..|+.+++++|++.|+ +++.++..|+||||+|+.
T Consensus         3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~   81 (179)
T 3f6q_A            3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGA-RINVMNRGDDTPLHLAAS   81 (179)
T ss_dssp             ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCC-CCCCcCCCCCCHHHHHHH
Confidence            3466888899999999999998886 56788888888899999999999999999998888 888888888999999999


Q ss_pred             cCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHH
Q psy15068        100 QGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIIS  179 (710)
Q Consensus       100 ~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~  179 (710)
                      .|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||+++|+..+      +.++++
T Consensus        82 ~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~------~~~~~~  155 (179)
T 3f6q_A           82 HGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPL------RELLRE  155 (179)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHH------HHHHHH
T ss_pred             cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHH------HHHHHH
Confidence            99999999999988888888888899999999999999999999999888888888888888888888      888888


Q ss_pred             HHHHcCCCcccCCC
Q psy15068        180 MLIENGANVREKMP  193 (710)
Q Consensus       180 ~Ll~~~~~~~~~~~  193 (710)
                      +|++.|++++....
T Consensus       156 ~L~~~g~~~~~~~~  169 (179)
T 3f6q_A          156 RAEKMGQNLNRIPY  169 (179)
T ss_dssp             HHHHTTCCCSCBCC
T ss_pred             HHHHhhcCcccCCc
Confidence            88888888776543

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.96  E-value=1.3e-28  Score=217.30  Aligned_cols=159  Identities=21%  Similarity=0.241  Sum_probs=152.8

Q ss_pred             cchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcC
Q psy15068         55 VELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLG  134 (710)
Q Consensus        55 ~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g  134 (710)
                      .|.||||.|+..|+.+++++|++.++ +++.++..|+||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|
T Consensus         2 ~~~t~L~~A~~~g~~~~v~~ll~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   80 (167)
T 3v31_A            2 ANSLSVHQLAAQGEMLYLATRIEQEN-VINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKG   80 (167)
T ss_dssp             TTCCCHHHHHHTTCHHHHHHHHHHSS-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred             CCcchHHHHHHCCCHHHHHHHHHcCC-CcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence            47899999999999999999999998 99999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHH
Q psy15068        135 NKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVEL  214 (710)
Q Consensus       135 ~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~  214 (710)
                      +.+++++|+++|++++..+..|.||||+|+..+      +.+++++|+++|++++..+. .|.||++.|+..|+.+++++
T Consensus        81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~~~~~~~~~~~  153 (167)
T 3v31_A           81 YTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGN------HVKCVKMLLESGADPTIETD-SGYNSMDLAVALGYRSVQQV  153 (167)
T ss_dssp             CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHH
T ss_pred             CHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcC------CHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcCcHHHHHH
Confidence            999999999999999999999999999999999      99999999999999998887 99999999999999999999


Q ss_pred             HHhCCCC
Q psy15068        215 LIKCKAD  221 (710)
Q Consensus       215 Ll~~g~~  221 (710)
                      |++++.+
T Consensus       154 L~~~~~~  160 (167)
T 3v31_A          154 IESHLLK  160 (167)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9987654

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.96  E-value=3.6e-31  Score=245.03  Aligned_cols=156  Identities=24%  Similarity=0.227  Sum_probs=129.5

Q ss_pred             HHHHHhhhccCCCc---cccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCC
Q psy15068         39 FGYFLQGIINSSSA---KSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGAN  115 (710)
Q Consensus        39 ~~~ll~~~~~~~~~---~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~  115 (710)
                      ++.|+++|.+++..   +..+.||||.|+..|+.++|++|++.|+ +++.+|..|+||||+|+..|+.+++++|++.|++
T Consensus         1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~   79 (229)
T 2vge_A            1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMN-DPSQPNEEGITALHNAICGANYSIVDFLITAGAN   79 (229)
T ss_dssp             ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSS-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence            46788888876644   4467789999999999999999999999 9999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccc-cCCCchhHHh--hhccCCCCCCHHHHHHHHHHcCCCcccCC
Q psy15068        116 VNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKC-SMMVTPILAV--SANMSEDSTDTNEIISMLIENGANVREKM  192 (710)
Q Consensus       116 ~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~~~~~~l~~a--~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~  192 (710)
                      ++..|..|.||||+|+..|+.+++++|+++|++++..+ ..|.|||++|  +..+      +.+++++|+++|++++..+
T Consensus        80 ~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~------~~~~v~~Ll~~ga~~~~~~  153 (229)
T 2vge_A           80 VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREG------YADCATYLADVEQSMGLMN  153 (229)
T ss_dssp             TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTT------HHHHHHHHHHHHHHTTTSG
T ss_pred             CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcC------hHHHHHHHHHcCCCccccc
Confidence            99999999999999999999999999999999999886 5899999998  7777      8888888888888777766


Q ss_pred             CCCCCCHHHH
Q psy15068        193 PFTDFSPLHF  202 (710)
Q Consensus       193 ~~~~~~~l~~  202 (710)
                      . .+.++++.
T Consensus       154 ~-~~~~~l~~  162 (229)
T 2vge_A          154 S-GAVYALWD  162 (229)
T ss_dssp             G-GEEEESSC
T ss_pred             C-CchHHHHH
Confidence            5 56666654

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.96  E-value=4e-31  Score=261.04  Aligned_cols=265  Identities=12%  Similarity=0.004  Sum_probs=190.4

Q ss_pred             cHHHHHHH-cCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCCCCC--CCC
Q psy15068        380 TPLLFAAK-HCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVND--TSN  456 (710)
Q Consensus       380 t~L~~A~~-~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~--~~~  456 (710)
                      +++++|.. .++.+++++++++|.+                    +.||||.|+.. |+.+++++|+++|.....  ..+
T Consensus        67 l~~~~a~~~~~~~~~~~~l~~~g~~--------------------~~T~Lh~Aa~~-G~~e~v~~Ll~~ga~~~~~~~~~  125 (376)
T 2aja_A           67 LCLYYAHYNRNAKQLWSDAHKKGIK--------------------SEVICFVAAIT-GCSSALDTLCLLLTSDEIVKVIQ  125 (376)
T ss_dssp             HHHHHHHTTTTCTTHHHHHHHHTCC--------------------HHHHHHHHHHH-CCHHHHHHHTTC--CCSSCC--C
T ss_pred             HHHHHHHhcCCCHHHHHHHHHcCCC--------------------cCCHHHHHHHc-CCHHHHHHHHHcCCcHHHHHHhc
Confidence            56677665 4778899999998875                    46999999999 999999999999983211  114


Q ss_pred             CCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHH
Q psy15068        457 KPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKK  536 (710)
Q Consensus       457 ~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  536 (710)
                      ..+.||||+|+..|+.+++++|+++|+++...+......+|  +|.|                      +..++.+++++
T Consensus       126 ~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~Tp--Lh~A----------------------a~~G~~eiv~~  181 (376)
T 2aja_A          126 AENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHA--FRLA----------------------AENGHLHVLNR  181 (376)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHH--HHHH----------------------HHTTCHHHHHH
T ss_pred             cCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCCH--HHHH----------------------HHCCCHHHHHH
Confidence            56788999999999999999999999874332221333888  9999                      99999999999


Q ss_pred             HHhcCCcccc--cCCCCCcHHHHHH-HcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCC
Q psy15068        537 NIEDGACVNV--SSERRGSALIYVA-WKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDM  613 (710)
Q Consensus       537 ll~~~~~~~~--~~~~g~t~L~~A~-~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~  613 (710)
                      |+++|++++.  .+..|.||||+|+ ..|+.+++++|+++|++       |.||||+|+.. |+.+++++|+++|++++.
T Consensus       182 Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL~~Aa~~-g~~evv~lL~~~ga~~~~  253 (376)
T 2aja_A          182 LCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM-------LAYAEIHEFEY-GEKYVNPFIARHVNRLKE  253 (376)
T ss_dssp             HHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH-------HHHHHHCTTTT-TTTTHHHHHHHHHHHHHH
T ss_pred             HHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc-------cchHHHHHHHC-CCHHHHHHHHhcCccccc
Confidence            9999999887  8888999999999 99999999999998742       88999999999 999999999999988766


Q ss_pred             CCCCCCCCHhHHHHhCCChh---------------------------HHHHHHhhhh-----ccccCCCCCCCchhhHHH
Q psy15068        614 KDGKTGKTPLKHAEAGKNRD---------------------------IIDLLHLIDN-----LFASVTNPYDPNVYHRIE  661 (710)
Q Consensus       614 ~~~~~g~t~L~~A~~~~~~~---------------------------~v~~Ll~~g~-----~~~~~~~~g~t~L~~~A~  661 (710)
                      .+     ++++.|+..|+.+                           .+++|++.+.     +.......+.||| |+|+
T Consensus       254 ~~-----~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L-~~A~  327 (376)
T 2aja_A          254 MH-----DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELL-RLAL  327 (376)
T ss_dssp             HH-----TTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHH-HHHH
T ss_pred             cc-----HHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHH-HHHH
Confidence            54     3566666666555                           3344443210     0112234567899 9999


Q ss_pred             Hhhh---cccccceeehhHHHHhhhcccchhHHHHhhhchhHHHHHHHhhc
Q psy15068        662 LMNS---AKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYSFLERLEEVLT  709 (710)
Q Consensus       662 ~~~~---~~~L~~~~g~~~~~~~~~~~G~t~l~~a~~~~~~~~~~~~~~~~  709 (710)
                      ..|+   +++| ++.|     .+++..|.||+.+|-.+|+.+++.+-.+++
T Consensus       328 ~~g~~e~v~lL-l~~~-----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (376)
T 2aja_A          328 RLGNQGACALL-LSIP-----SVLALTKANNYYINETGGRLDLRAVALEHH  372 (376)
T ss_dssp             HHTCTTHHHHH-TTSH-----HHHHSCC-----------------------
T ss_pred             HcCcHHHHHHH-HcCh-----HHHHHHHHhccccccccccccHHHHHHHHH
Confidence            9999   9999 8864     567899999999999999998877765554

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.96  E-value=2.2e-28  Score=218.34  Aligned_cols=168  Identities=24%  Similarity=0.219  Sum_probs=157.3

Q ss_pred             ccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhc
Q psy15068         54 SVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYL  133 (710)
Q Consensus        54 ~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~  133 (710)
                      ..+.++|+.|+..|+.++|++|++.+..+++.++..|+||||+|+..|+.+++++|++.|++++..|..|.||||+|+..
T Consensus         3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~   82 (179)
T 3f6q_A            3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH   82 (179)
T ss_dssp             ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred             HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence            35779999999999999999999997668999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHH
Q psy15068        134 GNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVE  213 (710)
Q Consensus       134 g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~  213 (710)
                      |+.+++++|+++|++++..+..|.||||+|+..+      +.+++++|+++|++++..+. .|.||++.|+..++.++++
T Consensus        83 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~------~~~~v~~Ll~~ga~~~~~~~-~g~tpl~~A~~~~~~~~~~  155 (179)
T 3f6q_A           83 GHRDIVQKLLQYKADINAVNEHGNVPLHYACFWG------QDQVAEDLVANGALVSICNK-YGEMPVDKAKAPLRELLRE  155 (179)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHTTCCSSBCCT-TSCCGGGGSCHHHHHHHHH
T ss_pred             CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC------CHHHHHHHHHCCCCcchhcc-CCCCcHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999      99999999999999999888 9999999999999999999


Q ss_pred             HHHhCCCCcchhhcc
Q psy15068        214 LLIKCKADTNLIVKV  228 (710)
Q Consensus       214 ~Ll~~g~~~~~~~~~  228 (710)
                      +|++.|++++..+..
T Consensus       156 ~L~~~g~~~~~~~~~  170 (179)
T 3f6q_A          156 RAEKMGQNLNRIPYK  170 (179)
T ss_dssp             HHHHTTCCCSCBCCC
T ss_pred             HHHHhhcCcccCCcc
Confidence            999999999876544

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.96  E-value=2.7e-28  Score=211.39  Aligned_cols=141  Identities=23%  Similarity=0.274  Sum_probs=72.3

Q ss_pred             cchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHH
Q psy15068         25 HHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYK  104 (710)
Q Consensus        25 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~  104 (710)
                      ++|+.|+..|+.+++++|+++|.+++ .+..|.||||.|+..|+.+++++|++.|+ +++.++..|+||||+|+..|+.+
T Consensus         4 ~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~   81 (153)
T 1awc_B            4 KKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGV-SRDARTKVDRTPLHMAASEGHAN   81 (153)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTC-CTTCCCTTCCCHHHHHHHHTCHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCCCCCCCCHHHHHHHcChHH
Confidence            44555555555555555555554443 34445555555555555555555555554 55555555555555555555555


Q ss_pred             HHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhcc
Q psy15068        105 MVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANM  167 (710)
Q Consensus       105 ~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~  167 (710)
                      ++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.||+++|+..+
T Consensus        82 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~  144 (153)
T 1awc_B           82 IVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNG  144 (153)
T ss_dssp             HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcC
Confidence            555555555555555555555555555555555555555555555544444444444444444

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.96  E-value=2.6e-28  Score=214.80  Aligned_cols=155  Identities=29%  Similarity=0.327  Sum_probs=79.0

Q ss_pred             cccchhhhhhcChhhHHHHHHh-hhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcC
Q psy15068         23 RHHHLFSEIMFSEEDAFGYFLQ-GIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQG  101 (710)
Q Consensus        23 ~~~~l~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g  101 (710)
                      +.++|+.|+..|+.+++++|++ .+.+++..+..|.||||.|+..|+.+++++|++.++ +++.++..|+||||+|+..|
T Consensus         8 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~   86 (165)
T 3twr_A            8 ADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGA-DVHAKDKGGLVPLHNACSYG   86 (165)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTT
T ss_pred             hhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCC-CCCccCCCCCCHHHHHHHcC
Confidence            3445555555555555555554 333444444445555555555555555555555555 55555555555555555555


Q ss_pred             cHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHH
Q psy15068        102 LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISML  181 (710)
Q Consensus       102 ~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~L  181 (710)
                      +.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||+++|.. +      +.+++++|
T Consensus        87 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~------~~~i~~~L  159 (165)
T 3twr_A           87 HYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-G------DTDIQDLL  159 (165)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-T------CHHHHHHH
T ss_pred             cHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-C------ChHHHHHH
Confidence            5555555555555555555555555555555555555555555555555555555555555443 3      44555555


Q ss_pred             HHcC
Q psy15068        182 IENG  185 (710)
Q Consensus       182 l~~~  185 (710)
                      +++|
T Consensus       160 ~~~g  163 (165)
T 3twr_A          160 RGDA  163 (165)
T ss_dssp             HTC-
T ss_pred             hhcc
Confidence            4443

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.96  E-value=7.7e-28  Score=208.52  Aligned_cols=151  Identities=26%  Similarity=0.341  Sum_probs=143.3

Q ss_pred             chhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCC
Q psy15068         56 ELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGN  135 (710)
Q Consensus        56 ~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~  135 (710)
                      ..|+|+.|++.|+.+++++|++.++ +++ .+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+
T Consensus         2 ~~~~L~~A~~~g~~~~v~~Ll~~g~-~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~   79 (153)
T 1awc_B            2 LGKKLLEAARAGQDDEVRILMANGA-PFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGH   79 (153)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHHTC-CCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred             ccHHHHHHHHcCCHHHHHHHHHcCC-CCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCh
Confidence            5699999999999999999999998 776 58899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHH
Q psy15068        136 KNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELL  215 (710)
Q Consensus       136 ~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~L  215 (710)
                      .+++++|+++|++++.++..|.||||+|+..+      +.+++++|+++|++++..+. .|.||++.|+..|+.+++++|
T Consensus        80 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~A~~~~~~~i~~~L  152 (153)
T 1awc_B           80 ANIVEVLLKHGADVNAKDMLKMTALHWATEHN------HQEVVELLIKYGADVHTQSK-FCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC------CHHHHHHHHHcCCCccccCC-CCCCHHHHHHHcCCHHHHHHh
Confidence            99999999999999999999999999999999      99999999999999988887 899999999999999999886

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.96  E-value=2.7e-28  Score=214.69  Aligned_cols=161  Identities=24%  Similarity=0.304  Sum_probs=152.3

Q ss_pred             ccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Q psy15068         52 AKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLAC  131 (710)
Q Consensus        52 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~  131 (710)
                      .+..|.|+|+.|++.|+.+++++|++.+..+++..+..|+||||+|+..|+.+++++|++.|++++.+|..|.||||+|+
T Consensus         4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~   83 (165)
T 3twr_A            4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNAC   83 (165)
T ss_dssp             --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence            46679999999999999999999999776688889999999999999999999999999999999999999999999999


Q ss_pred             hcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHH
Q psy15068        132 YLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSV  211 (710)
Q Consensus       132 ~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~  211 (710)
                      ..|+.+++++|+++|++++..+..|.||||+|+..+      +.+++++|+++|++++..+. .|.||++.|+. ++.++
T Consensus        84 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~a~~-~~~~i  155 (165)
T 3twr_A           84 SYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKG------KYEICKLLLQHGADPTKKNR-DGNTPLDLVKD-GDTDI  155 (165)
T ss_dssp             HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT------CHHHHHHHHHTTCCTTCCCT-TSCCTGGGSCT-TCHHH
T ss_pred             HcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcC------CHHHHHHHHHcCCCCcccCC-CCCChhHhHhc-CChHH
Confidence            999999999999999999999999999999999999      99999999999999999988 99999999999 89999


Q ss_pred             HHHHHhCCC
Q psy15068        212 VELLIKCKA  220 (710)
Q Consensus       212 v~~Ll~~g~  220 (710)
                      +++|++.|+
T Consensus       156 ~~~L~~~gA  164 (165)
T 3twr_A          156 QDLLRGDAA  164 (165)
T ss_dssp             HHHHHTC--
T ss_pred             HHHHhhccc
Confidence            999999885

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.95  E-value=3.5e-27  Score=205.43  Aligned_cols=153  Identities=23%  Similarity=0.297  Sum_probs=100.2

Q ss_pred             chhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCC
Q psy15068         56 ELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGN  135 (710)
Q Consensus        56 ~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~  135 (710)
                      +.|+||.|+..|+.+++++|++....+++..+..|+||||+ +..|+.+++++|++.|++++.+|..|.||||+|+..|+
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~   80 (156)
T 1bd8_A            2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF   80 (156)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence            45666666666666666666666333566666666666666 66666666666666666666666666666666666666


Q ss_pred             HHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHH
Q psy15068        136 KNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELL  215 (710)
Q Consensus       136 ~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~L  215 (710)
                      .+++++|+++|++++.++..|.||||+|+..+      +.+++++|+++ ++++..+. .|.|||+.|+..|+.+++++|
T Consensus        81 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~v~~Ll~~-~~~~~~~~-~g~t~l~~A~~~~~~~~v~~L  152 (156)
T 1bd8_A           81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEG------HTAVVSFLAAE-SDLHRRDA-RGLTPLELALQRGAQDLVDIL  152 (156)
T ss_dssp             HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHT------CHHHHHHHHTT-SCTTCCCT-TSCCHHHHHHHSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhC------hHHHHHHHHhc-cCCCCcCC-CCCCHHHHHHHcCcHHHHHHH
Confidence            66666666666666666666666666666666      66666666666 66655555 666666666666666666666


Q ss_pred             Hh
Q psy15068        216 IK  217 (710)
Q Consensus       216 l~  217 (710)
                      ++
T Consensus       153 l~  154 (156)
T 1bd8_A          153 QG  154 (156)
T ss_dssp             HT
T ss_pred             Hh
Confidence            65

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.95  E-value=3.2e-27  Score=205.71  Aligned_cols=153  Identities=20%  Similarity=0.281  Sum_probs=147.3

Q ss_pred             cccchhhhhhcChhhHHHHHHhh-hccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcC
Q psy15068         23 RHHHLFSEIMFSEEDAFGYFLQG-IINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQG  101 (710)
Q Consensus        23 ~~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g  101 (710)
                      +.++|+.|+..|+.+++++|++. +.+++..+..|.||||. +..|+.+++++|++.|+ +++.++..|+||||+|+..|
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~   79 (156)
T 1bd8_A            2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGA-SPNVQDTSGTSPVHDAARTG   79 (156)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTT
T ss_pred             cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCC-CCCCcCCCCCCHHHHHHHcC
Confidence            35899999999999999999998 44899999999999999 99999999999999999 99999999999999999999


Q ss_pred             cHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHH
Q psy15068        102 LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISML  181 (710)
Q Consensus       102 ~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~L  181 (710)
                      +.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++ ++++.++..|.|||++|+..+      +.+++++|
T Consensus        80 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~------~~~~v~~L  152 (156)
T 1bd8_A           80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRG------AQDLVDIL  152 (156)
T ss_dssp             CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSC------CHHHHHHH
T ss_pred             cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcC------cHHHHHHH
Confidence            99999999999999999999999999999999999999999999 999999999999999999999      99999999


Q ss_pred             HHc
Q psy15068        182 IEN  184 (710)
Q Consensus       182 l~~  184 (710)
                      +++
T Consensus       153 l~~  155 (156)
T 1bd8_A          153 QGH  155 (156)
T ss_dssp             HTT
T ss_pred             Hhh
Confidence            874

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.95  E-value=1.4e-28  Score=230.52  Aligned_cols=166  Identities=19%  Similarity=0.161  Sum_probs=134.4

Q ss_pred             hhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHH
Q psy15068        526 VRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLL  605 (710)
Q Consensus       526 ~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll  605 (710)
                      +..+..+.++.|+++|++++.. ..|.||||.|+..|+.+++++|+++|++++.+|..|+||||+|+.. |+.+++++|+
T Consensus        13 ~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~-g~~~~v~~Ll   90 (239)
T 1ycs_B           13 KRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCA-GHTEIVKFLV   90 (239)
T ss_dssp             -------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHH-TCHHHHHHHH
T ss_pred             hhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence            8899999999999999999865 6789999999999999999999999999999999999999999999 9999999999


Q ss_pred             HcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCC-CchhhHH--HHhhh---cccccceeehhHHH
Q psy15068        606 HHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYD-PNVYHRI--ELMNS---AKQLGLVHVFEIMK  679 (710)
Q Consensus       606 ~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~~A--~~~~~---~~~L~~~~g~~~~~  679 (710)
                      ++|++++.++ ..|.||||+|+..|+.+++++|+++|++++.++..|. ||| |+|  +..|+   +++| +++|+++  
T Consensus        91 ~~ga~~~~~d-~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l-~~a~~~~~g~~~~~~~L-l~~~a~~--  165 (239)
T 1ycs_B           91 QFGVNVNAAD-SDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAA-DKCEEMEEGYTQCSQFL-YGVQEKM--  165 (239)
T ss_dssp             HHTCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHH-HHCCSSSTTCCCHHHHH-HHHHHHT--
T ss_pred             HcCCCCCccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchH-HHHHHhhhccHHHHHHH-HHhhhcc--
Confidence            9999999999 9999999999999999999999999999999998887 999 999  77777   9999 9999999  


Q ss_pred             Hhh---------hcccchhHHHHhhhch
Q psy15068        680 VVK---------NYAGETLIGVARKMNY  698 (710)
Q Consensus       680 ~~~---------~~~G~t~l~~a~~~~~  698 (710)
                      +..         +..|.||+++|...|.
T Consensus       166 ~~~~~~~~~al~d~~~~~~~eLa~~~G~  193 (239)
T 1ycs_B          166 GIMNKGVIYALWDYEPQNDDELPMKEGD  193 (239)
T ss_dssp             TTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred             cccccceEEEEeccCCCCCCcccccCCC
Confidence            776         5568899999988775

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.94  E-value=1.9e-27  Score=206.54  Aligned_cols=142  Identities=22%  Similarity=0.131  Sum_probs=118.0

Q ss_pred             cccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCC-Hh
Q psy15068        545 NVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKT-PL  623 (710)
Q Consensus       545 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t-~L  623 (710)
                      +..+..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+ . ++.+++++|+++|++++.++ ..|.| ||
T Consensus         6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~-~~~~~v~~Ll~~g~~~~~~d-~~g~ttpL   82 (156)
T 1bi7_B            6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-M-GSARVAELLLLHGAEPNCAD-PATLTRPV   82 (156)
T ss_dssp             ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-T-TCHHHHHHHHTTTCCCCCCC-TTTCCCHH
T ss_pred             cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-c-CCHHHHHHHHHcCCCCCCcC-CCCCcHHH
Confidence            456778999999999999999999999999999999999999999985 6 99999999999999999999 99999 99


Q ss_pred             HHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh---cccccceeehhHHHHhhhcccchhHHHH
Q psy15068        624 KHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS---AKQLGLVHVFEIMKVVKNYAGETLIGVA  693 (710)
Q Consensus       624 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~~~~~~~~~~~G~t~l~~a  693 (710)
                      |+|+..|+.+++++|+++|++++.+|..|+||| |+|+..|+   +++| +++|+++  +.+|..|.||.+-+
T Consensus        83 ~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl-~~A~~~~~~~~v~~L-l~~ga~~--~~~~~~g~t~~~~~  151 (156)
T 1bi7_B           83 HDAAREGFLDTLVVLHRAGARLDVRDAWGRLPV-DLAEELGHRDVARYL-RAAAGGT--RGSNHARIDAAEGP  151 (156)
T ss_dssp             HHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHH-HHHHHHTCHHHHHHH-SSCC-------------------
T ss_pred             HHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHH-HHHHHhCHHHHHHHH-HHcCCCC--CccCcCcCcccccC
Confidence            999999999999999999999999999999999 99999999   9999 9999999  99999999998744

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.94  E-value=1.3e-26  Score=195.89  Aligned_cols=134  Identities=20%  Similarity=0.169  Sum_probs=98.8

Q ss_pred             hccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCC-CC
Q psy15068         46 IINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEK-GY  124 (710)
Q Consensus        46 ~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-~~  124 (710)
                      +.+++..+..|.||||.|+..|+.+++++|++.++ +++.++..|+||||+|+. |+.+++++|+++|++++.+|.. |.
T Consensus         2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~   79 (136)
T 1d9s_A            2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGA-DPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLT   79 (136)
T ss_dssp             CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTB
T ss_pred             CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCC-CcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCC
Confidence            34667777777777777777777777777777777 777777777777777777 7777777777777777777777 77


Q ss_pred             CHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCC
Q psy15068        125 TPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGAN  187 (710)
Q Consensus       125 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~  187 (710)
                      ||||+|+..|+.+++++|+++|++++.++..|.|||++|+..+      +.+++++|+++|++
T Consensus        80 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~------~~~~~~~Ll~~Gad  136 (136)
T 1d9s_A           80 RPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQG------HRDIARYLHAATGD  136 (136)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHT------CHHHHHHHHHHHCC
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC------CHHHHHHHHHcCCC
Confidence            7777777777777777777777777777777777777777666      66667766666653

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.93  E-value=6.6e-27  Score=197.76  Aligned_cols=131  Identities=21%  Similarity=0.168  Sum_probs=122.2

Q ss_pred             CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCC-C
Q psy15068        541 GACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKT-G  619 (710)
Q Consensus       541 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~-g  619 (710)
                      +++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.  ++.+++++|+++|++++.++ .. |
T Consensus         2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~--~~~~~v~~Ll~~g~~~~~~~-~~~g   78 (136)
T 1d9s_A            2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM--GSAQVAELLLLHGAEPNCAD-PATL   78 (136)
T ss_dssp             CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT--SCHHHHHHHHHHTCCSSCCB-TTTT
T ss_pred             CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc--CCHHHHHHHHHCCCCCCCcC-CCCC
Confidence            46788899999999999999999999999999999999999999999999998  89999999999999999999 77 9


Q ss_pred             CCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh---cccccceeehh
Q psy15068        620 KTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS---AKQLGLVHVFE  676 (710)
Q Consensus       620 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~~  676 (710)
                      .||||+|+..|+.+++++|+++|++++.+|..|.||| |+|+..++   +++| +++|||
T Consensus        79 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl-~~A~~~~~~~~~~~L-l~~Gad  136 (136)
T 1d9s_A           79 TRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPV-DLAEEQGHRDIARYL-HAATGD  136 (136)
T ss_dssp             BCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHH-HHHHHHTCHHHHHHH-HHHHCC
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHH-HHHHHcCCHHHHHHH-HHcCCC
Confidence            9999999999999999999999999999999999999 99999998   8999 998875

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.93  E-value=3.1e-26  Score=203.38  Aligned_cols=160  Identities=16%  Similarity=0.200  Sum_probs=116.1

Q ss_pred             chhHHHHHHhcCCHHHHHHHHhcCCCCCcccc-CCCCcHHHHHHHcCcH----HHHHHHHHcCCCCCCCCCCCCCHHHHH
Q psy15068         56 ELTLLCSAVWDNKIREVEFLLSTGDHDVNEKL-QDGRTALYMAILQGLY----KMVTLLIHHGANVNDRDEKGYTPLHLA  130 (710)
Q Consensus        56 ~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~g~~----~~v~~Ll~~g~~~~~~~~~~~t~L~~A  130 (710)
                      +.++|+.|++.|+.+.++.+++.+.   +.++ ..|+||||+|+..|+.    +++++|++.|++++.+|..|+||||+|
T Consensus         6 ~~~~l~~Aa~~g~~~~~~~l~~~~~---~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a   82 (186)
T 3t8k_A            6 EYRTVSAAAMLGTYEDFLELFEKGY---EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPL   82 (186)
T ss_dssp             HCSSHHHHHHHSCHHHHHHHHHHSS---SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHH
T ss_pred             cccHHHHHHHcCCHHHHHHHHhcCc---ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence            4567777788888877777777643   4444 5677888888777754    477788888888887777788888887


Q ss_pred             HhcCC------HHHHHHHHhCCCCccccccCCC-chhHHhhhccCCCCCCHHHHHHHHHH-cCCCcccCCCCCCCCHHHH
Q psy15068        131 CYLGN------KNIVKFLLSKKADVRAKCSMMV-TPILAVSANMSEDSTDTNEIISMLIE-NGANVREKMPFTDFSPLHF  202 (710)
Q Consensus       131 ~~~g~------~~iv~~Ll~~g~~~~~~~~~~~-~~l~~a~~~~~~~~~~~~~~~~~Ll~-~~~~~~~~~~~~~~~~l~~  202 (710)
                      +..|+      .+++++|+++|++++.+|..|. ||||+|+..+... ....+++++|++ +|++++.++. .|.|||++
T Consensus        83 ~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~-~~~~~iv~~Ll~~~gad~~~~d~-~G~TpL~~  160 (186)
T 3t8k_A           83 FQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDE-NEMIPLYKLIFSQSGLQLLIKDK-WGLTALEF  160 (186)
T ss_dssp             HHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCH-HHHHHHHHHHHTSTTCCTTCCCT-TSCCHHHH
T ss_pred             HHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCCh-hhHHHHHHHHHHhcCCCCcccCC-CCCCHHHH
Confidence            77776      5677888888888888888887 7888877733110 015567777887 7888777777 77888888


Q ss_pred             HHHhCCHHHHHHHHhCCC
Q psy15068        203 AVVKKNLSVVELLIKCKA  220 (710)
Q Consensus       203 A~~~~~~~~v~~Ll~~g~  220 (710)
                      |+..|+.+++++|.++..
T Consensus       161 A~~~~~~~~v~~L~~~~~  178 (186)
T 3t8k_A          161 VKRCQKPIALKMMEDYIK  178 (186)
T ss_dssp             HHTTTCHHHHHHHHHHHH
T ss_pred             HHHcCCHHHHHHHHHHHH
Confidence            888888888887776543

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.93  E-value=1.1e-26  Score=206.37  Aligned_cols=161  Identities=12%  Similarity=0.139  Sum_probs=144.8

Q ss_pred             ccccchhhhhhcChhhHHHHHHhhhccCCCcc-ccchhHHHHHHhcCCH----HHHHHHHhcCCCCCccccCCCCcHHHH
Q psy15068         22 YRHHHLFSEIMFSEEDAFGYFLQGIINSSSAK-SVELTLLCSAVWDNKI----REVEFLLSTGDHDVNEKLQDGRTALYM   96 (710)
Q Consensus        22 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~t~L~~A~~~g~~----~~v~~Ll~~~~~~~~~~~~~g~t~L~~   96 (710)
                      .++++|+.|++.|+.+.++.+++.+.  +..+ ..|+||||.|+..|+.    +++++|++.|+ +++.++..|+||||+
T Consensus         5 ~~~~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Ga-dvn~~d~~g~TpLh~   81 (186)
T 3t8k_A            5 SEYRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGA-DIKSRTKEGTTLFFP   81 (186)
T ss_dssp             HHCSSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTC-CSSCCCTTCCCTHHH
T ss_pred             ccccHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCC-CCCCCCCCCCcHHHH
Confidence            35689999999999999999998764  4555 7899999999999975    59999999999 999999999999999


Q ss_pred             HHHcCc------HHHHHHHHHcCCCCCCCCCCCC-CHHHHHHhcC-----CHHHHHHHHh-CCCCccccccCCCchhHHh
Q psy15068         97 AILQGL------YKMVTLLIHHGANVNDRDEKGY-TPLHLACYLG-----NKNIVKFLLS-KKADVRAKCSMMVTPILAV  163 (710)
Q Consensus        97 A~~~g~------~~~v~~Ll~~g~~~~~~~~~~~-t~L~~A~~~g-----~~~iv~~Ll~-~g~~~~~~~~~~~~~l~~a  163 (710)
                      |+..|+      .+++++|+++|++++.+|..|. ||||+|+..+     +.+++++|++ +|++++.+|..|.|||++|
T Consensus        82 a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A  161 (186)
T 3t8k_A           82 LFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFV  161 (186)
T ss_dssp             HHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHH
T ss_pred             HHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHH
Confidence            999986      6889999999999999999999 9999999954     4579999999 9999999999999999999


Q ss_pred             hhccCCCCCCHHHHHHHHHHcCCCcccC
Q psy15068        164 SANMSEDSTDTNEIISMLIENGANVREK  191 (710)
Q Consensus       164 ~~~~~~~~~~~~~~~~~Ll~~~~~~~~~  191 (710)
                      +..+      +.+++++|.+...+.+.+
T Consensus       162 ~~~~------~~~~v~~L~~~~~~~~~~  183 (186)
T 3t8k_A          162 KRCQ------KPIALKMMEDYIKKYNLK  183 (186)
T ss_dssp             HTTT------CHHHHHHHHHHHHHHTCC
T ss_pred             HHcC------CHHHHHHHHHHHHHHhcc
Confidence            9999      999999998775544433

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.93  E-value=2.9e-26  Score=199.04  Aligned_cols=140  Identities=19%  Similarity=0.201  Sum_probs=108.3

Q ss_pred             ccccccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCc-HHHHHH
Q psy15068         20 SSYRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRT-ALYMAI   98 (710)
Q Consensus        20 ~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t-~L~~A~   98 (710)
                      ...+.|+|+.|+..|+.+++++|+++|++++..+..|.||||.|+ .|+.+++++|++.|+ +++.++..|+| |||+|+
T Consensus         9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~-~~~~~d~~g~ttpL~~A~   86 (156)
T 1bi7_B            9 MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGA-EPNCADPATLTRPVHDAA   86 (156)
T ss_dssp             -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTC-CCCCCCTTTCCCHHHHHH
T ss_pred             CccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCC-CCCCcCCCCCcHHHHHHH
Confidence            445678888888888888888888888888888888888888885 888888888888888 88888888888 888888


Q ss_pred             HcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhH
Q psy15068         99 LQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPIL  161 (710)
Q Consensus        99 ~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~  161 (710)
                      ..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.+|.+
T Consensus        87 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~  149 (156)
T 1bi7_B           87 REGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE  149 (156)
T ss_dssp             HHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------
T ss_pred             HCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence            888888888888888888888888888888888888888888888888888888888888765

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.92  E-value=4e-25  Score=186.78  Aligned_cols=123  Identities=25%  Similarity=0.324  Sum_probs=61.8

Q ss_pred             ccccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcC
Q psy15068         22 YRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQG  101 (710)
Q Consensus        22 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g  101 (710)
                      .+.|+|+.|+..|+.+++++|+++|++++..|..|.||||.|+..|+.+++++|++.|+ +++.+|..|+||||+|+..|
T Consensus        13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~d~~g~t~L~~A~~~~   91 (136)
T 2jab_A           13 DLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGA-DVNAVDAIGFTPLHLAAFIG   91 (136)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTCCCHHHHHHHHT
T ss_pred             cccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCcCCCCCCCHHHHHHHcC
Confidence            34445555555555555555555555555554455555555555555555555555544 44444445555555555555


Q ss_pred             cHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhC
Q psy15068        102 LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSK  145 (710)
Q Consensus       102 ~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~  145 (710)
                      +.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++
T Consensus        92 ~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~  135 (136)
T 2jab_A           92 HLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL  135 (136)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred             CHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence            55555555555555544444555555555555555555555443

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.92  E-value=1.5e-25  Score=200.38  Aligned_cols=165  Identities=24%  Similarity=0.232  Sum_probs=145.0

Q ss_pred             hhhhhcChhhHHHHHHhhhccCC-----------CccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHH
Q psy15068         28 FSEIMFSEEDAFGYFLQGIINSS-----------SAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYM   96 (710)
Q Consensus        28 ~~a~~~~~~~~~~~ll~~~~~~~-----------~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~   96 (710)
                      +.|++.|..+.+++|++.+....           ..+..|.||||.|+..|+.+++++|++ ++ +++.+|..|+||||+
T Consensus         5 ~~aa~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~-~~~~~d~~g~t~L~~   82 (183)
T 3deo_A            5 IIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE-DR-DVDAVDENGRTALLF   82 (183)
T ss_dssp             EEEEEEETTTEEEEEEEETTCCCCEEEEGGGSCHHHHHHHHHHHHHHHHTTCHHHHHHHTT-TS-CTTCCCTTSCCHHHH
T ss_pred             HHHHHhcCCchhHHHHHHhCCCCccccchhcccccCCCCCCCHHHHHHHcCCHHHHHHHHh-cC-CCCCcCCCCCCHHHH
Confidence            34666777777777775432221           225689999999999999999999999 88 999999999999999


Q ss_pred             HHHcCcHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHH
Q psy15068         97 AILQGLYKMVTLLIHHGANVNDRD-EKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTN  175 (710)
Q Consensus        97 A~~~g~~~~v~~Ll~~g~~~~~~~-~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~  175 (710)
                      |+..|+.+++++|+++|++++..+ ..|+||||+|+..|+.+++++|+++|++++.++..|.|||++|+..+      +.
T Consensus        83 A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~------~~  156 (183)
T 3deo_A           83 VAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREIL------KT  156 (183)
T ss_dssp             HHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHH------HT
T ss_pred             HHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhc------cC
Confidence            999999999999999999999998 88999999999999999999999999999999999999999999876      22


Q ss_pred             HHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhC
Q psy15068        176 EIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKC  218 (710)
Q Consensus       176 ~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~  218 (710)
                                       . .+.+++++|+..|..+++++|.++
T Consensus       157 -----------------~-~~~~~l~~a~~~~~~~i~~~L~~~  181 (183)
T 3deo_A          157 -----------------T-PKGNPMQFGRRIGLEKVINVLEGQ  181 (183)
T ss_dssp             -----------------C-CCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred             -----------------c-ccccHHHHHHHcCHHHHHHHHHHh
Confidence                             1 566899999999999999999864

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.92  E-value=1.3e-24  Score=183.72  Aligned_cols=128  Identities=33%  Similarity=0.437  Sum_probs=117.0

Q ss_pred             CccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Q psy15068         51 SAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLA  130 (710)
Q Consensus        51 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A  130 (710)
                      ..+..+.||||.|+..|+.++|++|++.|+ +++.+|..|+||||+|+..|+.+++++|++.|++++..|..|.||||+|
T Consensus         9 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A   87 (136)
T 2jab_A            9 HHGSDLGKKLLEAARAGQDDEVRILMANGA-DVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLA   87 (136)
T ss_dssp             ---CHHHHHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred             cccccccHHHHHHHHhCCHHHHHHHHHcCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHH
Confidence            345678899999999999999999999999 9999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcC
Q psy15068        131 CYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENG  185 (710)
Q Consensus       131 ~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~  185 (710)
                      +..|+.+++++|+++|++++..+..|.|||++|+..+      +.+++++|++.|
T Consensus        88 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~------~~~~~~~Ll~~G  136 (136)
T 2jab_A           88 AFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNG------NEDLAEILQKLN  136 (136)
T ss_dssp             HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHC-
T ss_pred             HHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCC------CHHHHHHHHHcC
Confidence            9999999999999999999999988889888888888      888888888765

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.92  E-value=5.7e-25  Score=186.33  Aligned_cols=130  Identities=25%  Similarity=0.248  Sum_probs=116.9

Q ss_pred             CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCC
Q psy15068        541 GACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGK  620 (710)
Q Consensus       541 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~  620 (710)
                      |+++ .++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.. ++.+++++|+++|++++.++ ..|.
T Consensus         1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~g~~~~~~~-~~g~   77 (137)
T 3c5r_A            1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNH-GHLKVVELLLQHKALVNTTG-YQND   77 (137)
T ss_dssp             ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHT-TCHHHHHHHHHTTCCTTCCC-GGGC
T ss_pred             CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc-CCHHHHHHHHHcCCcccCcC-CCCC
Confidence            4566 6788999999999999999999999999999999999999999999999 99999999999999999999 9999


Q ss_pred             CHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh---cccccceeeh
Q psy15068        621 TPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS---AKQLGLVHVF  675 (710)
Q Consensus       621 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~  675 (710)
                      ||||+|+..|+.+++++|+++|++++.+|..|.||| |+|+..+.   +++| .+.+.
T Consensus        78 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl-~~A~~~~~~~~l~~l-~~~~~  133 (137)
T 3c5r_A           78 SPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPV-DYTDDESMKSLLLLP-EKNES  133 (137)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGG-GGCCCHHHHHHHSCC------
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH-HHHhhccHHHHHhhc-ccccc
Confidence            999999999999999999999999999999999999 99999888   5666 44443

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.92  E-value=2.1e-24  Score=180.39  Aligned_cols=125  Identities=32%  Similarity=0.421  Sum_probs=85.6

Q ss_pred             cccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCc
Q psy15068         23 RHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGL  102 (710)
Q Consensus        23 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~  102 (710)
                      +.|+|+.|+..|+.+++++|+++|++++..+..|.||||.|+..|+.+++++|++.++ +++.++..|.||||+|+..|+
T Consensus         2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~l~~A~~~~~   80 (126)
T 1n0r_A            2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA-DVNAKDKNGRTPLHLAARNGH   80 (126)
T ss_dssp             CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTC
T ss_pred             CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCC-CCcccCCCCCcHHHHHHHcCh
Confidence            4566666666666666666666666666666666666666666666666666666666 666666666666666666666


Q ss_pred             HHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCC
Q psy15068        103 YKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKAD  148 (710)
Q Consensus       103 ~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~  148 (710)
                      .+++++|+++|++++.+|..|.|||++|+..|+.+++++|+++|++
T Consensus        81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad  126 (126)
T 1n0r_A           81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY  126 (126)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence            6666666666666666666666666666666666666666666653

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.91  E-value=3.7e-24  Score=178.88  Aligned_cols=126  Identities=40%  Similarity=0.531  Sum_probs=113.5

Q ss_pred             cchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcC
Q psy15068         55 VELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLG  134 (710)
Q Consensus        55 ~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g  134 (710)
                      +|.||||.|+..|+.+++++|+++++ +++..+..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~   79 (126)
T 1n0r_A            1 NGRTPLHLAARNGHLEVVKLLLEAGA-DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG   79 (126)
T ss_dssp             CCCCHHHHHHHHTCHHHHHHHHHHTC-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             CCccHHHHHHHcCcHHHHHHHHHcCC-CCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Confidence            47899999999999999999999988 89999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCC
Q psy15068        135 NKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGAN  187 (710)
Q Consensus       135 ~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~  187 (710)
                      +.+++++|+++|++++.++..|.||+++|+..+      +.+++++|+++|++
T Consensus        80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~------~~~~~~~Ll~~Gad  126 (126)
T 1n0r_A           80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG------HLEVVKLLLEAGAY  126 (126)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHHTCC
T ss_pred             hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC------cHHHHHHHHHcCCC
Confidence            999999999999999888888888888888888      88888888888764

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.91  E-value=1.1e-24  Score=184.59  Aligned_cols=133  Identities=32%  Similarity=0.325  Sum_probs=120.1

Q ss_pred             hccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCC
Q psy15068         46 IINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYT  125 (710)
Q Consensus        46 ~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t  125 (710)
                      |+++ .+|..|.||||.|+..|+.+++++|++.|+ +++.++..|+||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus         1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t   78 (137)
T 3c5r_A            1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGS-DPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDS   78 (137)
T ss_dssp             ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTC-CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCC
T ss_pred             CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCC
Confidence            5666 678899999999999999999999999999 99999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCC
Q psy15068        126 PLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGA  186 (710)
Q Consensus       126 ~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~  186 (710)
                      |||+|+..|+.+++++|+++|++++.++..|.||+++|+..+      ..+++++|.+.+.
T Consensus        79 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~------~~~~l~~l~~~~~  133 (137)
T 3c5r_A           79 PLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDES------MKSLLLLPEKNES  133 (137)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHH------HHHHHSCC-----
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhcc------HHHHHhhcccccc
Confidence            999999999999999999999999999999999999999988      8888888776543

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.91  E-value=3.5e-25  Score=197.93  Aligned_cols=137  Identities=18%  Similarity=0.170  Sum_probs=126.1

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHH
Q psy15068        548 SERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAE  627 (710)
Q Consensus       548 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~  627 (710)
                      +..|.||||+|+..|+.+++++|++ |++++.+|..|+||||+|+.. |+.+++++|+++|++++.+++..|.||||+|+
T Consensus        41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~-~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~  118 (183)
T 3deo_A           41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGL-GSDKCVRLLAEAGADLDHRDMRGGLTALHMAA  118 (183)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHH
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence            4578899999999999999999999 999999999999999999999 99999999999999999988788999999999


Q ss_pred             hCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhhcccccceeehhHHHHhhhcccchhHHHHhhhchhHHHHH
Q psy15068        628 AGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYSFLERL  704 (710)
Q Consensus       628 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~~~~L~~~~g~~~~~~~~~~~G~t~l~~a~~~~~~~~~~~  704 (710)
                      ..|+.+++++|+++|++++.+|..|+||| |+|+..++.                 ..+.|||++|+..|+.++.++
T Consensus       119 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl-~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i~~~  177 (183)
T 3deo_A          119 GYVRPEVVEALVELGADIEVEDERGLTAL-ELAREILKT-----------------TPKGNPMQFGRRIGLEKVINV  177 (183)
T ss_dssp             HTTCHHHHHHHHHHTCCTTCCCTTSCCHH-HHHHHHHHT-----------------CCCCSHHHHHHHHHHHHHHHH
T ss_pred             hcCcHHHHHHHHHcCCCCcCCCCCCCCHH-HHHHHhccC-----------------cccccHHHHHHHcCHHHHHHH
Confidence            99999999999999999999999999999 999965542                 345799999999999875543

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.91  E-value=1.1e-24  Score=204.17  Aligned_cols=172  Identities=21%  Similarity=0.163  Sum_probs=153.4

Q ss_pred             cccccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHc
Q psy15068         21 SYRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQ  100 (710)
Q Consensus        21 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~  100 (710)
                      ..+.+++..++..|+.+.+..+...+.++   +..|.||||.|++.|+.++|++|++ ++ +++.+|..|+||||+|+..
T Consensus        13 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~-~~-~~~~~d~~g~t~L~~A~~~   87 (244)
T 3ui2_A           13 GEGAMEYLIEWKDGHSPSWVPSSYIAADV---VSEYETPWWTAARKADEQALSQLLE-DR-DVDAVDENGRTALLFVAGL   87 (244)
T ss_dssp             TTTEEEEEEEESSCCCCEEEEGGGSCHHH---HHHHHHHHHHHHTTTCHHHHHHTTT-TC-CTTCBCTTSCBHHHHHHHH
T ss_pred             CCCccHHHHHHHcCCCccccccccccccc---ccCCCCHHHHHHHcCCHHHHHHHHc-CC-CCCCcCCCCCCHHHHHHHC
Confidence            44567788888888888887776655444   3569999999999999999999999 88 9999999999999999999


Q ss_pred             CcHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHH
Q psy15068        101 GLYKMVTLLIHHGANVNDRD-EKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIIS  179 (710)
Q Consensus       101 g~~~~v~~Ll~~g~~~~~~~-~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~  179 (710)
                      |+.+++++|+++|++++..+ ..|.||||+|+..|+.++|++|+++|++++.++..|.|||++|+..+..          
T Consensus        88 g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~----------  157 (244)
T 3ui2_A           88 GSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKT----------  157 (244)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTT----------
T ss_pred             CCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhc----------
Confidence            99999999999999999998 8899999999999999999999999999999999999999999875511          


Q ss_pred             HHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCC
Q psy15068        180 MLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKAD  221 (710)
Q Consensus       180 ~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~  221 (710)
                                   . .+.+||++|+..|+.+++++|++.+.+
T Consensus       158 -------------~-~~~~~l~~a~~~g~~~iv~~L~~~~~~  185 (244)
T 3ui2_A          158 -------------T-PKGNPMQFGRRIGLEKVINVLEGQVFE  185 (244)
T ss_dssp             -------------C-CCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred             -------------c-CCCCHHHHHHHcChHHHHHHHHHhccc
Confidence                         1 678999999999999999999986543

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.90  E-value=9.1e-23  Score=196.55  Aligned_cols=131  Identities=19%  Similarity=0.226  Sum_probs=85.3

Q ss_pred             hhcCchHHHHHHHhcCCcccc------cCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCC
Q psy15068        526 VRSNKYDEVKKNIEDGACVNV------SSERRGSALIYVAWK---GYEEIVDLLLDNGADVNFKSATGFTALHMACRFHS  596 (710)
Q Consensus       526 ~~~~~~~~~~~ll~~~~~~~~------~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~  596 (710)
                      +..++.+.++.|++.|++++.      .+..|.||||+|+..   ++.+++++|+++|++++.+|..|+||||+|+.. |
T Consensus       159 ~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~-g  237 (301)
T 2b0o_E          159 ICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALY-N  237 (301)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHT-T
T ss_pred             hhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHc-C
Confidence            666666666666666666665      466666777777765   666777777777777776676777777777766 6


Q ss_pred             chHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh
Q psy15068        597 NDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS  665 (710)
Q Consensus       597 ~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~  665 (710)
                      +.+++++|+++|++++.++ ..|.||||+|+..|+.+++++|+++|++      .|.||| |+|+..|+
T Consensus       238 ~~~~v~~Ll~~gad~~~~d-~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpL-h~A~~~g~  298 (301)
T 2b0o_E          238 QPDCLKLLLKGRALVGTVN-EAGETALDIARKKHHKECEELLEQAQAG------TFAFPL-HVDYSWVI  298 (301)
T ss_dssp             CHHHHHHHHHTTCCCSCCC-TTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCC-C-------
T ss_pred             CHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChh-HHHHhcCC
Confidence            7777777777777777666 6677777777777777777777776665      466777 77666553

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.90  E-value=1.1e-23  Score=174.46  Aligned_cols=115  Identities=20%  Similarity=0.113  Sum_probs=104.2

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHH
Q psy15068        548 SERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAE  627 (710)
Q Consensus       548 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~  627 (710)
                      +..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.. ++.+++++|+++|++++.++ ..|.||||+|+
T Consensus         4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~d-~~g~tpL~~A~   81 (123)
T 3aaa_C            4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADC-GQLEILEFLLLKGADINAPD-KHHITPLLSAV   81 (123)
T ss_dssp             ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHT-TCHHHHHHHHTTTCCTTCCC-TTSCCHHHHHH
T ss_pred             ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHc-CCHHHHHHHHHcCCCCCcCC-CCCCCHHHHHH
Confidence            45678999999999999999999999999999999999999999998 99999999999999999999 99999999999


Q ss_pred             hCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh
Q psy15068        628 AGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS  665 (710)
Q Consensus       628 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~  665 (710)
                      ..|+.+++++|+++|++++.+|..|.||| |+|+..+.
T Consensus        82 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l-~~A~~~~~  118 (123)
T 3aaa_C           82 YEGHVSCVKLLLSKGADKTVKGPDGLTAF-EATDNQAI  118 (123)
T ss_dssp             HHTCHHHHHHHHHTTCCTTCCCTTSCCHH-HHCCCHHH
T ss_pred             HcCCHHHHHHHHHcCCCCCCcCCCCCCHH-HHhCCHHH
Confidence            99999999999999999999999999999 99965554

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.90  E-value=3.6e-23  Score=171.36  Aligned_cols=114  Identities=32%  Similarity=0.379  Sum_probs=99.9

Q ss_pred             cccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHh
Q psy15068         53 KSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACY  132 (710)
Q Consensus        53 ~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~  132 (710)
                      +..|.||||.|+..|+.+++++|++.++ +++.++..|+||||+|+..|+.+++++|++.|++++.+|..|.||||+|+.
T Consensus         4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~   82 (123)
T 3aaa_C            4 GSMCDKEFMWALKNGDLDEVKDYVAKGE-DVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVY   82 (123)
T ss_dssp             ---CHHHHHHHHHTTCHHHHHHHHHTTC-CTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred             ccccchHHHHHHHcCCHHHHHHHHHcCC-CcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence            4567899999999999999999999988 889999999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHhCCCCccccccCCCchhHHhhhcc
Q psy15068        133 LGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANM  167 (710)
Q Consensus       133 ~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~  167 (710)
                      .|+.+++++|+++|++++.++..|.||+++|...+
T Consensus        83 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~  117 (123)
T 3aaa_C           83 EGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQA  117 (123)
T ss_dssp             HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHH
T ss_pred             cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHH
Confidence            99999999999999999999999999999886544

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.89  E-value=2.1e-23  Score=195.44  Aligned_cols=135  Identities=19%  Similarity=0.178  Sum_probs=124.9

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHh
Q psy15068        549 ERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEA  628 (710)
Q Consensus       549 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~  628 (710)
                      ..|.||||+|+..|+.+++++|++ |++++.+|..|+||||+|+.. |+.++|++|+++|++++.+++..|.||||+|+.
T Consensus        43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~  120 (244)
T 3ui2_A           43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGL-GSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG  120 (244)
T ss_dssp             HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHH-TCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred             cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHC-CCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence            568899999999999999999999 999999999999999999999 999999999999999999887889999999999


Q ss_pred             CCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhhcccccceeehhHHHHhhhcccchhHHHHhhhchhHHHH
Q psy15068        629 GKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYSFLER  703 (710)
Q Consensus       629 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~~~~L~~~~g~~~~~~~~~~~G~t~l~~a~~~~~~~~~~  703 (710)
                      .|+.+++++|+++|++++.+|..|+||| |+|+..+                 .+..|.|||++|+..|+.++.+
T Consensus       121 ~g~~~~v~~Ll~~ga~~~~~d~~g~t~l-~~A~~~~-----------------~~~~~~~~l~~a~~~g~~~iv~  177 (244)
T 3ui2_A          121 YVRPEVVEALVELGADIEVEDERGLTAL-ELAREIL-----------------KTTPKGNPMQFGRRIGLEKVIN  177 (244)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCCTTCCCHH-HHHHHHH-----------------TTCCCSSHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHCCCCCCCCCCCCCcHH-HHHHHHH-----------------hccCCCCHHHHHHHcChHHHHH
Confidence            9999999999999999999999999999 9998432                 3456789999999999988544

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.89  E-value=7.6e-24  Score=196.27  Aligned_cols=136  Identities=21%  Similarity=0.106  Sum_probs=115.2

Q ss_pred             ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHc-CCCCCCCCCCCCCCHhH
Q psy15068        546 VSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHH-GAYYDMKDGKTGKTPLK  624 (710)
Q Consensus       546 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~-g~~~~~~~~~~g~t~L~  624 (710)
                      ..+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.. |+.++|++|+++ |++++.++ ..|.||||
T Consensus        68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~~g~~~~~~d-~~g~tpL~  145 (222)
T 3ehr_A           68 EQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHG-GHKDIVEMLFTQPNIELNQQN-KLGDTALH  145 (222)
T ss_dssp             HHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHTTSTTCCCCCCC-TTSCCHHH
T ss_pred             ccccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHc-CCHHHHHHHHcCCCCCccccC-CCCCCHHH
Confidence            3466789999999999999999999999999999999999999999999 999999999999 99999999 99999999


Q ss_pred             HHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh---cccccceeehhHHHHhhhcccc
Q psy15068        625 HAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS---AKQLGLVHVFEIMKVVKNYAGE  687 (710)
Q Consensus       625 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~~~~~~~~~~~G~  687 (710)
                      +|+..|+.+++++|+++|++++.+|..|.||| |+|+..++   ++.| +..|+..  +..|.+|.
T Consensus       146 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l-~~A~~~~~~~~l~~l-~~~~~~~--~~~~~~~~  207 (222)
T 3ehr_A          146 AAAWKGYADIVQLLLAKGARTDLRNIEKKLAF-DMATNAACASLLKKK-QGTDAVR--TLSNAEDY  207 (222)
T ss_dssp             HHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHH-HHCCSHHHHHHHC--------------------
T ss_pred             HHHHcCCHHHHHHHHHcCCCCccccCCCCCHH-HHhcchhHHHHHHHH-hccchhh--hccchhhh
Confidence            99999999999999999999999999999999 99999998   8999 9999999  77776653

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.88  E-value=6.3e-23  Score=197.68  Aligned_cols=143  Identities=20%  Similarity=0.215  Sum_probs=119.1

Q ss_pred             cccchhHHHHHHhcCCHHHHHHHHhcCCCCCcc------ccCCCCcHHHHHHHc---CcHHHHHHHHHcCCCCCCCCCCC
Q psy15068         53 KSVELTLLCSAVWDNKIREVEFLLSTGDHDVNE------KLQDGRTALYMAILQ---GLYKMVTLLIHHGANVNDRDEKG  123 (710)
Q Consensus        53 ~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~------~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~  123 (710)
                      .....++|+.|+..|+.+.|+.|++.++ +++.      .+..|+||||+|+..   |+.+++++|+++|++++.+|..|
T Consensus       148 ~~~~~~~L~~A~~~g~~~~v~~ll~~g~-d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G  226 (301)
T 2b0o_E          148 CTPEPQRLWTAICNRDLLSVLEAFANGQ-DFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADG  226 (301)
T ss_dssp             CC-CHHHHHHHHHTTCHHHHHHHHHTTC-CTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTC
T ss_pred             cCchHHHHhhhhhccCHHHHHHHHhcCC-cccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCC
Confidence            3445678999999999999999999988 8887      688899999999987   88999999999999999999999


Q ss_pred             CCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHH
Q psy15068        124 YTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFA  203 (710)
Q Consensus       124 ~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A  203 (710)
                      .||||+|+..|+.++|++|+++|++++.+|..|.|||++|+..+      +.+++++|+++|++       .|.||||+|
T Consensus       227 ~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~------~~~iv~~Ll~~ga~-------~g~tpLh~A  293 (301)
T 2b0o_E          227 NTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKH------HKECEELLEQAQAG-------TFAFPLHVD  293 (301)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHT------CHHHHHHHHHHHHH-------TTSSCCC--
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC------CHHHHHHHHHhcCC-------CCCChhHHH
Confidence            99999999999999999999999999999999999999999998      89999999999888       567899999


Q ss_pred             HHhCCH
Q psy15068        204 VVKKNL  209 (710)
Q Consensus       204 ~~~~~~  209 (710)
                      +..|+.
T Consensus       294 ~~~g~~  299 (301)
T 2b0o_E          294 YSWVIS  299 (301)
T ss_dssp             ------
T ss_pred             HhcCCc
Confidence            988764

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.88  E-value=1.6e-22  Score=187.35  Aligned_cols=135  Identities=21%  Similarity=0.177  Sum_probs=116.5

Q ss_pred             CccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHc-CCCCCCCCCCCCCHHHH
Q psy15068         51 SAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHH-GANVNDRDEKGYTPLHL  129 (710)
Q Consensus        51 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~t~L~~  129 (710)
                      ..+..|.||||.|+..|+.++|++|++.|+ +++.+|..|+||||+|+..|+.+++++|++. |++++.+|..|.||||+
T Consensus        68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~  146 (222)
T 3ehr_A           68 EQAESIDNPLHEAAKRGNLSWLRECLDNRV-GVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHA  146 (222)
T ss_dssp             HHEEEESCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHH
T ss_pred             ccccccccccccccccCcHHHHHHHHhCCC-CccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHH
Confidence            446678999999999999999999999999 9999999999999999999999999999999 99999999999999999


Q ss_pred             HHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCC
Q psy15068        130 ACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKM  192 (710)
Q Consensus       130 A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~  192 (710)
                      |+..|+.++|++|+++|++++.++..|.|||++|+..+      ..++++.|++.++.....+
T Consensus       147 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~------~~~~l~~l~~~~~~~~~~~  203 (222)
T 3ehr_A          147 AAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAA------CASLLKKKQGTDAVRTLSN  203 (222)
T ss_dssp             HHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHH------HHHHHC-------------
T ss_pred             HHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchh------HHHHHHHHhccchhhhccc
Confidence            99999999999999999999999999999999999999      9999999999888765443

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.87  E-value=2.8e-21  Score=183.95  Aligned_cols=117  Identities=25%  Similarity=0.321  Sum_probs=108.4

Q ss_pred             hhcCchHHHHHHHhcCCccc------ccCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCC
Q psy15068        526 VRSNKYDEVKKNIEDGACVN------VSSERRGSALIYVAWK---GYEEIVDLLLDNGADVNFKSATGFTALHMACRFHS  596 (710)
Q Consensus       526 ~~~~~~~~~~~ll~~~~~~~------~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~  596 (710)
                      +..++.+.++.+++.|.+++      ..+..|.||||+|+..   |+.+++++|+++|+++|.+|..|+||||+|+.. |
T Consensus       138 ~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~-g  216 (278)
T 1dcq_A          138 VKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLT-D  216 (278)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHT-T
T ss_pred             hhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHc-C
Confidence            88999999999999998844      4478899999999999   899999999999999999999999999999998 9


Q ss_pred             chHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhc
Q psy15068        597 NDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNL  644 (710)
Q Consensus       597 ~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~  644 (710)
                      +.+++++|+++|++++.++ ..|.||||+|+..|+.+++++|+++|++
T Consensus       217 ~~~~v~~Ll~~gad~~~~d-~~g~tpL~~A~~~~~~~~v~~Ll~~ga~  263 (278)
T 1dcq_A          217 NAECLKLLLRGKASIEIAN-ESGETPLDIAKRLKHEHCEELLTQALSG  263 (278)
T ss_dssp             CHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHcCCCCCCcc-CCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            9999999999999999999 9999999999999999999999999885

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.86  E-value=1.5e-21  Score=152.06  Aligned_cols=93  Identities=41%  Similarity=0.563  Sum_probs=85.8

Q ss_pred             cchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcC
Q psy15068         55 VELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLG  134 (710)
Q Consensus        55 ~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g  134 (710)
                      +|+||||.|+..|+.+++++|++.|+ +++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~   79 (93)
T 1n0q_A            1 NGRTPLHLAARNGHLEVVKLLLEAGA-DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG   79 (93)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCC-CCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence            47899999999999999999999999 99999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhCCCC
Q psy15068        135 NKNIVKFLLSKKAD  148 (710)
Q Consensus       135 ~~~iv~~Ll~~g~~  148 (710)
                      +.+++++|+++|++
T Consensus        80 ~~~~~~~Ll~~ga~   93 (93)
T 1n0q_A           80 HLEVVKLLLEAGAY   93 (93)
T ss_dssp             CHHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHcCCC
Confidence            99999999999874

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.86  E-value=3.5e-22  Score=196.29  Aligned_cols=147  Identities=18%  Similarity=0.133  Sum_probs=102.4

Q ss_pred             CCCCCcHHHHHHHc-CCHHHHHHHHHcCCCCcccC--CCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhH
Q psy15068        548 SERRGSALIYVAWK-GYEEIVDLLLDNGADVNFKS--ATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLK  624 (710)
Q Consensus       548 ~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~~--~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~  624 (710)
                      ...+.|+||.|+.. ++.+++++|+++|++++..+  ..|.||||+|+.. ++.+++++|+++|++++..+ ..|.||||
T Consensus       196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~-g~~~iv~~LL~~Gadvn~~d-~~G~TpLh  273 (368)
T 3jue_A          196 SLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAA-NSLLACEFLLQNGANVNQAD-SAGRGPLH  273 (368)
T ss_dssp             -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHT-TCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred             cCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHC-CCHHHHHHHHHcCCCCCCCC-CCCCCHHH
Confidence            34556788888888 88888888888888888877  7888888888887 88888888888888888888 88888888


Q ss_pred             HHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh---cccccceeehhHH-HHhhhcccchhHHHHhhhch
Q psy15068        625 HAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS---AKQLGLVHVFEIM-KVVKNYAGETLIGVARKMNY  698 (710)
Q Consensus       625 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~~~~-~~~~~~~G~t~l~~a~~~~~  698 (710)
                      +|+..|+.+++++|+++|++++.+|..|.||| |+|+..++   +++| +.+|.... ....+..|.|+++++..-..
T Consensus       274 ~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL-~~A~~~g~~~iv~lL-l~~~~~~~~~~~~~~~~~t~l~i~~~~~~  349 (368)
T 3jue_A          274 HATILGHTGLACLFLKRGADLGARDSEGRDPL-TIAMETANADIVTLL-RLAKMREAEAAQGQAGDETYLDIFRDFSL  349 (368)
T ss_dssp             HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH-HHHHHTTCHHHHHHH-HHHHC------------------------
T ss_pred             HHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHH-HHHHHCCCHHHHHHH-HHcCCCcccccccCCCCCCHHHHHHHHHh
Confidence            88888888888888888888888888888888 88888887   7777 77653321 15567778888888766544

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.86  E-value=2.2e-21  Score=151.17  Aligned_cols=93  Identities=38%  Similarity=0.508  Sum_probs=88.5

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhC
Q psy15068        550 RRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAG  629 (710)
Q Consensus       550 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~  629 (710)
                      +|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.. ++.+++++|+++|++++.++ ..|.||||+|+..
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~-~~~~~v~~Ll~~ga~~~~~d-~~g~t~l~~A~~~   78 (93)
T 1n0q_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARN-GHLEVVKLLLEAGADVNAKD-KNGRTPLHLAARN   78 (93)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHT
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCCCccC-CCCCCHHHHHHHc
Confidence            478999999999999999999999999999999999999999999 99999999999999999999 9999999999999


Q ss_pred             CChhHHHHHHhhhhc
Q psy15068        630 KNRDIIDLLHLIDNL  644 (710)
Q Consensus       630 ~~~~~v~~Ll~~g~~  644 (710)
                      |+.+++++|+++|++
T Consensus        79 ~~~~~~~~Ll~~ga~   93 (93)
T 1n0q_A           79 GHLEVVKLLLEAGAY   93 (93)
T ss_dssp             TCHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHHHcCCC
Confidence            999999999999875

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.85  E-value=6.7e-21  Score=187.22  Aligned_cols=148  Identities=22%  Similarity=0.272  Sum_probs=112.2

Q ss_pred             hhc-CchHHHHHHHhcCCcccccC--CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHH
Q psy15068        526 VRS-NKYDEVKKNIEDGACVNVSS--ERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVR  602 (710)
Q Consensus       526 ~~~-~~~~~~~~ll~~~~~~~~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~  602 (710)
                      +.. ++.+++++|+++|++++..+  ..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+.. ++.++++
T Consensus       207 a~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~-g~~~~v~  285 (368)
T 3jue_A          207 SGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATIL-GHTGLAC  285 (368)
T ss_dssp             TSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH-TCHHHHH
T ss_pred             HHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc-CcHHHHH
Confidence            888 99999999999999999998  8899999999999999999999999999999999999999999999 9999999


Q ss_pred             HHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhh---hccccCCCCCCCchhhHHHHhhh-----cccccceee
Q psy15068        603 KLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLID---NLFASVTNPYDPNVYHRIELMNS-----AKQLGLVHV  674 (710)
Q Consensus       603 ~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~~A~~~~~-----~~~L~~~~g  674 (710)
                      +|+++|++++..+ ..|.||||+|+..++.+++++|++.+   .+....+..+.|++ +++.....     .+.| ...+
T Consensus       286 ~LL~~Gad~~~~d-~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l-~i~~~~~~~~~~~~ekl-~r~~  362 (368)
T 3jue_A          286 LFLKRGADLGARD-SEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYL-DIFRDFSLMASDDPEKL-SRRS  362 (368)
T ss_dssp             HHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHHC---------------------------------------
T ss_pred             HHHHCcCCCCCcC-CCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHH-HHHHHHHhhcCCCHHHH-HhcC
Confidence            9999999999999 99999999999999999999999876   44556678889999 87776554     5666 5555


Q ss_pred             hhH
Q psy15068        675 FEI  677 (710)
Q Consensus       675 ~~~  677 (710)
                      .++
T Consensus       363 ~~~  365 (368)
T 3jue_A          363 HDL  365 (368)
T ss_dssp             ---
T ss_pred             CCc
Confidence            554

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.85  E-value=1.4e-21  Score=159.50  Aligned_cols=109  Identities=30%  Similarity=0.354  Sum_probs=96.7

Q ss_pred             ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHH
Q psy15068        546 VSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKH  625 (710)
Q Consensus       546 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~  625 (710)
                      .++.+|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+.. ++.+++++|+++|++++..+ ..|.||||+
T Consensus         4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~-~~~~~~~~Ll~~g~~~~~~d-~~g~tpl~~   81 (115)
T 2l6b_A            4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKN-GHAEIVKLLLAKGADVNARS-KDGNTPEHL   81 (115)
T ss_dssp             CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTT-TCHHHHHHHTTTTCCTTCCC-TTCCCTTHH
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc-CcHHHHHHHHHcCCCCcccC-CCCCCHHHH
Confidence            4677889999999999999999999999999999999999999999998 89999999999999999888 889999999


Q ss_pred             HHhCCChhHHHHHHhhhhccccCCCCCCCch
Q psy15068        626 AEAGKNRDIIDLLHLIDNLFASVTNPYDPNV  656 (710)
Q Consensus       626 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L  656 (710)
                      |+..++.+++++|+++|+++|.++..|.||-
T Consensus        82 A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~  112 (115)
T 2l6b_A           82 AKKNGHHEIVKLLDAKGADVNARSWGSSHHH  112 (115)
T ss_dssp             HHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred             HHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence            9999999999999999999999999998874

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.85  E-value=2.1e-20  Score=177.87  Aligned_cols=167  Identities=19%  Similarity=0.227  Sum_probs=92.7

Q ss_pred             cceecccccccccchhhhhhcChhhHHHHHHhhhcc-----CCCc--------------------------cccchhHHH
Q psy15068         13 LVHSVKESSYRHHHLFSEIMFSEEDAFGYFLQGIIN-----SSSA--------------------------KSVELTLLC   61 (710)
Q Consensus        13 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~-----~~~~--------------------------~~~~~t~L~   61 (710)
                      .+.+...+....+.+..+...|+....+++-..-..     +...                          +....++|+
T Consensus        56 ~v~s~~~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~  135 (278)
T 1dcq_A           56 RMQSLTLDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLC  135 (278)
T ss_dssp             CEEETTTSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHH
T ss_pred             eeeeeecCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhh
Confidence            455566677777889999888887666554321111     1100                          011224555


Q ss_pred             HHHhcCCHHHHHHHHhcCCCC------CccccCCCCcHHHHHHHc---CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHh
Q psy15068         62 SAVWDNKIREVEFLLSTGDHD------VNEKLQDGRTALYMAILQ---GLYKMVTLLIHHGANVNDRDEKGYTPLHLACY  132 (710)
Q Consensus        62 ~A~~~g~~~~v~~Ll~~~~~~------~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~  132 (710)
                      .|+..|+.+.++.+++.|+ +      ++..+..|+||||+|+..   |+.+++++|+++|++++.+|..|.||||+|+.
T Consensus       136 ~a~~~~d~~~~~~ll~~g~-~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~  214 (278)
T 1dcq_A          136 EAVKTRDIFGLLQAYADGV-DLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCL  214 (278)
T ss_dssp             HHHHTTCHHHHHHHHHTTC-CTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHH
T ss_pred             hHhhhcccHHHHHHHHhhc-chhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHH
Confidence            5555555555555555555 4      223345555555555555   55555555555555555555555555555555


Q ss_pred             cCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCC
Q psy15068        133 LGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGA  186 (710)
Q Consensus       133 ~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~  186 (710)
                      .|+.++|++|+++|++++.+|..|.|||++|+..+      +.+++++|+++|+
T Consensus       215 ~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~------~~~~v~~Ll~~ga  262 (278)
T 1dcq_A          215 TDNAECLKLLLRGKASIEIANESGETPLDIAKRLK------HEHCEELLTQALS  262 (278)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHHHT
T ss_pred             cCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcC------CHHHHHHHHHcCC
Confidence            55555555555555555555555555555555555      5555555555544

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.84  E-value=4.4e-21  Score=156.62  Aligned_cols=108  Identities=39%  Similarity=0.445  Sum_probs=100.3

Q ss_pred             CccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Q psy15068         51 SAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLA  130 (710)
Q Consensus        51 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A  130 (710)
                      .+|.+|.||||.|+..|+.+++++|++.++ +++.+|..|+||||+|+..|+.+++++|++.|++++.+|..|.||||+|
T Consensus         4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A   82 (115)
T 2l6b_A            4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGA-DVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLA   82 (115)
T ss_dssp             CCSCSSCCHHHHHHHHTCHHHHHHHTTTTC-CSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHH
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence            467889999999999999999999999999 9999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCHHHHHHHHhCCCCccccccCCCch
Q psy15068        131 CYLGNKNIVKFLLSKKADVRAKCSMMVTP  159 (710)
Q Consensus       131 ~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~  159 (710)
                      +..|+.+++++|+++|++++.++..+.+|
T Consensus        83 ~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~  111 (115)
T 2l6b_A           83 KKNGHHEIVKLLDAKGADVNARSWGSSHH  111 (115)
T ss_dssp             HTTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred             HHCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence            99999999999999999999998888876

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.76  E-value=3.2e-18  Score=137.71  Aligned_cols=93  Identities=30%  Similarity=0.391  Sum_probs=84.6

Q ss_pred             CCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHH
Q psy15068         49 SSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLH  128 (710)
Q Consensus        49 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~  128 (710)
                      +...+.+|.|+||.|+..|+.+++++|++.++ +++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||
T Consensus        17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~   95 (110)
T 2zgd_A           17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGA-DVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFD   95 (110)
T ss_dssp             -----CCHHHHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred             ccccCCccchHHHHHHHcCCHHHHHHHHHcCC-CCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHH
Confidence            45567789999999999999999999999999 99999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCHHHHHHH
Q psy15068        129 LACYLGNKNIVKFL  142 (710)
Q Consensus       129 ~A~~~g~~~iv~~L  142 (710)
                      +|+..|+.+++++|
T Consensus        96 ~A~~~~~~~~~~~L  109 (110)
T 2zgd_A           96 ISIDNGNEDLAEIL  109 (110)
T ss_dssp             HHHHHTCHHHHHHH
T ss_pred             HHHHcCCHHHHHHh
Confidence            99999999999987

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.74  E-value=6.7e-18  Score=135.82  Aligned_cols=93  Identities=33%  Similarity=0.450  Sum_probs=83.9

Q ss_pred             ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHh
Q psy15068        544 VNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPL  623 (710)
Q Consensus       544 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L  623 (710)
                      ....+.+|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.. ++.+++++|+++|++++.++ ..|.|||
T Consensus        17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~-~~~~~v~~Ll~~ga~~~~~d-~~g~tpl   94 (110)
T 2zgd_A           17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARN-GHLEVVKLLLEAGADVXAQD-KFGKTAF   94 (110)
T ss_dssp             -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT-TCHHHHHHHHHTTCCTTCCC-TTSCCHH
T ss_pred             ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCccccc-cCCCcHH
Confidence            345678899999999999999999999999999999999999999999999 99999999999999999999 9999999


Q ss_pred             HHHHhCCChhHHHHH
Q psy15068        624 KHAEAGKNRDIIDLL  638 (710)
Q Consensus       624 ~~A~~~~~~~~v~~L  638 (710)
                      |+|+..|+.+++++|
T Consensus        95 ~~A~~~~~~~~~~~L  109 (110)
T 2zgd_A           95 DISIDNGNEDLAEIL  109 (110)
T ss_dssp             HHHHHHTCHHHHHHH
T ss_pred             HHHHHcCCHHHHHHh
Confidence            999999999999987

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	710
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	3e-44
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-35
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-15
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	3e-05
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	6e-25
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	7e-16
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	1e-12
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	5e-12
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	8e-24
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	3e-22
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	4e-20
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	3e-18
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	8e-18
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	4e-17
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	5e-17
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-10
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	6e-10
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	3e-21
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	3e-16
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	5e-14
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	2e-13
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	6e-21
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-16
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-13
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	8e-13
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-11
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-06
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	2e-20
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	2e-15
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	4e-13
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	2e-10
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	1e-06
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	4e-19
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	4e-18
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	4e-17
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-15
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-14
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	3e-12
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	3e-05
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	2e-04
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	6e-19
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	2e-13
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	5e-13
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	2e-07
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	2e-05
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	1e-16
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	2e-16
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	1e-11
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	2e-11
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	1e-10
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	5e-08
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	5e-08
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	8e-16
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	1e-15
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	7e-14
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	3e-12
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	3e-12
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	4e-12
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	4e-12
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	6e-10
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	4e-04
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	9e-14
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	4e-11
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	7e-11
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-10
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	6e-10
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-09
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-06
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	6e-13
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	2e-12
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	5e-11
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	1e-10
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	7e-09
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	3e-08
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	3e-05
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	8e-04
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	2e-11
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	5e-09
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	8e-07
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	1e-06
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	9e-05
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	5e-04
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	5e-04
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	0.001
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	3e-08
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	2e-07
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	8e-07
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	9e-07
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	1e-05
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	0.001
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	5e-08
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	1e-04
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	2e-04
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	0.002
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	0.002
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	0.004
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	6e-08
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	4e-07
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	4e-07
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	3e-06
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	8e-06
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	1e-05
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	0.001
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	7e-08
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	2e-06
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	3e-05
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	7e-05
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	2e-04
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	0.001
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	1e-04
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	2e-04
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	0.002
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	0.004

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  162 bits (409), Expect = 3e-44
 Identities = 101/439 (23%), Positives = 165/439 (37%), Gaps = 41/439 (9%)

Query: 57  LTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANV 116
           LT L  A +   +  V+ LL  G    N       T L+MA   G  ++   L+ + A V
Sbjct: 1   LTPLHVASFMGHLPIVKNLLQRG-ASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV 59

Query: 117 NDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNE 176
           N + +   TPLH A  +G+ N+VK LL   A+     +   TP                E
Sbjct: 60  NAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTP------LHIAAREGHVE 113

Query: 177 IISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFF 236
            +  L+E  A+         F+PLH A     + V ELL++  A  N   K    P L  
Sbjct: 114 TVLALLEKEASQACMTKK-GFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTP-LHV 171

Query: 237 AIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
           A+  N++ IV+  L  +         +  + LH A     +++ + L++     NA++  
Sbjct: 172 AVHHNNLDIVK-LLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQ 230

Query: 297 FLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKR 356
            + P+  A   G                N NL  K     L  V       V        
Sbjct: 231 GVTPLHLAAQEGHAEMVALLL---SKQANGNLGNKSGLTPLHLVAQEGHVPVA------- 280

Query: 357 LDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISD 416
                  +I     ++A      TPL  A+ + +++  K+L+Q  A+VN           
Sbjct: 281 -----DVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAK--------- 326

Query: 417 ARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVK 476
                    S L  A +   + ++V LLL +GA  N+ S+     PLA+A + G   +  
Sbjct: 327 ----TKLGYSPLHQAAQQ-GHTDIVTLLLKNGASPNEVSSD-GTTPLAIAKRLGYISVTD 380

Query: 477 ELQNYGAQIDKENYLKNKE 495
            L+    +      + +K 
Sbjct: 381 VLKVVTDETSFVL-VSDKH 398

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (343), Expect = 2e-35
 Identities = 96/445 (21%), Positives = 170/445 (38%), Gaps = 60/445 (13%)

Query: 199 PLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVS 258
           PLH A    +L +V+ L++  A  N +  V  E  L  A  +   ++ +  L      V+
Sbjct: 3   PLHVASFMGHLPIVKNLLQRGASPN-VSNVKVETPLHMAARAGHTEVAKYLL-QNKAKVN 60

Query: 259 ISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYL 318
               D  + LH A  +G+  +V++L++   + N        P+  A   G   T +A   
Sbjct: 61  AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALL- 119

Query: 319 LQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDM 378
             +   +     K+    L         +            + + +++R  + NA G + 
Sbjct: 120 --EKEASQACMTKKGFTPLHVAAKYGKVR------------VAELLLERDAHPNAAGKNG 165

Query: 379 ITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNI 438
           +TPL  A  H +L   K L+ +G + +             S  +   + L  A K   N 
Sbjct: 166 LTPLHVAVHHNNLDIVKLLLPRGGSPH-------------SPAWNGYTPLHIAAKQ--NQ 210

Query: 439 EMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAAR 498
             V   LL      +  +     PL +A Q G  ++V  L +  A  +    L NK    
Sbjct: 211 VEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGN----LGNKSGLT 266

Query: 499 IAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYV 558
             H   + E    + D+L                     I+ G  V+ ++    + L   
Sbjct: 267 PLHLVAQ-EGHVPVADVL---------------------IKHGVMVDATTRMGYTPLHVA 304

Query: 559 AWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKT 618
           +  G  ++V  LL + ADVN K+  G++ LH A +   + +IV  LL +GA  +      
Sbjct: 305 SHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQ-QGHTDIVTLLLKNGASPNEVS-SD 362

Query: 619 GKTPLKHAEAGKNRDIIDLLHLIDN 643
           G TPL  A+      + D+L ++ +
Sbjct: 363 GTTPLAIAKRLGYISVTDVLKVVTD 387

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.3 bits (189), Expect = 1e-15
 Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 8/209 (3%)

Query: 27  LFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEK 86
           L      ++ +     LQ   ++++     +T L  A  +     V  L  +   + N  
Sbjct: 202 LHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALL-LSKQANGNLG 260

Query: 87  LQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKK 146
            + G T L++   +G   +  +LI HG  V+     GYTPLH+A + GN  +VKFLL  +
Sbjct: 261 NKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQ 320

Query: 147 ADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVK 206
           ADV AK  +  +P+   +           +I+++L++NGA+  E       +PL  A   
Sbjct: 321 ADVNAKTKLGYSPLHQAAQQGHT------DIVTLLLKNGASPNEVSSD-GTTPLAIAKRL 373

Query: 207 KNLSVVELLIKCKADTNLIVKVNQEPLLF 235
             +SV ++L     +T+ ++  ++  + F
Sbjct: 374 GYISVTDVLKVVTDETSFVLVSDKHRMSF 402

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (104), Expect = 3e-05
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 586 TALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
           T LH+A     +  IV+ LL  GA  ++ +    +TPL  A    + ++   L
Sbjct: 2   TPLHVASF-MGHLPIVKNLLQRGASPNVSN-VKVETPLHMAARAGHTEVAKYL 52

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  103 bits (257), Expect = 6e-25
 Identities = 49/294 (16%), Positives = 103/294 (35%), Gaps = 12/294 (4%)

Query: 25  HHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVN 84
           H L S+ + S           ++N +  K      L   ++         L +   +  +
Sbjct: 8   HDLTSDFLSSPLKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNS 67

Query: 85  EKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDR-DEKGYTPLHLACYLGNKNIVKFLL 143
           E     +   +++    L ++     +   N+N   DE G TPLH    + N  +VK L+
Sbjct: 68  EGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLV 127

Query: 144 SKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPL--- 200
              ++     +M  + ++    +++   + T E +   +     + + M  T    +   
Sbjct: 128 KHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIIT 187

Query: 201 -----HFAVVKKNLSV-VELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKN 254
                  A  K  L + +  ++K +          +E             I+E       
Sbjct: 188 SGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWI 247

Query: 255 F--DVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIG 306
               ++  D + ++ L+ A  +GN+ IV  L+    D    N+  L P+ F  G
Sbjct: 248 IANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAG 301

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 76.6 bits (187), Expect = 7e-16
 Identities = 52/324 (16%), Positives = 102/324 (31%), Gaps = 38/324 (11%)

Query: 313 HVAEYLLQQDSINVNLPIKR---PNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTE 369
               + L  D ++  L I +     ++ D    +K    + +     + ++   + + + 
Sbjct: 4   ITFTHDLTSDFLSSPLKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSS 63

Query: 370 NINAEGDDMITPLLFAAKHCDLQSAKY-LIQKGANVNLTETQKAFISDARSSDFCFRSAL 428
           N N+EG          +    LQ           N+N+              D    + L
Sbjct: 64  NRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIP------------VDEHGNTPL 111

Query: 429 QYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQI------VKELQNYG 482
            +      N+E+VK L+ HG++     N  +   +       ++        +  L    
Sbjct: 112 HWLTSI-ANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCL 170

Query: 483 AQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGA 542
              D  N          +  T      K   D+L   +   +N         K++  +  
Sbjct: 171 ILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDK 230

Query: 543 CVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVR 602
                                 E +DL       +N + + G T L++A R   N +IV 
Sbjct: 231 NGERKDS-------------ILENLDLKWIIANMLNAQDSNGDTCLNIAAR-LGNISIVD 276

Query: 603 KLLHHGAYYDMKDGKTGKTPLKHA 626
            LL +GA   + + K+G  P+   
Sbjct: 277 ALLDYGADPFIAN-KSGLRPVDFG 299

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 67.0 bits (162), Expect = 1e-12
 Identities = 38/306 (12%), Positives = 95/306 (31%), Gaps = 39/306 (12%)

Query: 104 KMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAV 163
           K++  L     N N++  K    L    +   + +   L +  ++  ++          V
Sbjct: 20  KIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHV 79

Query: 164 SANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTN 223
           S +     +   E+         N+   +     +PLH+     NL +V+ L+K  ++  
Sbjct: 80  SFD-----SLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRL 134

Query: 224 LIVKVNQEP--LLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQ 281
               + +        ++ +      EA L+     + + D    ++LH       +    
Sbjct: 135 YGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCS 194

Query: 282 MLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVM 341
              K   DI                          +++++ +  +           +   
Sbjct: 195 AAAKYYLDILM-----------------------GWIVKKQNRPIQSGTNEKESKPNDKN 231

Query: 342 SLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKG 401
             +   ++    +K +             +NA+  +  T L  AA+  ++     L+  G
Sbjct: 232 GERKDSILENLDLKWIIA---------NMLNAQDSNGDTCLNIAARLGNISIVDALLDYG 282

Query: 402 ANVNLT 407
           A+  + 
Sbjct: 283 ADPFIA 288

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 65.1 bits (157), Expect = 5e-12
 Identities = 19/131 (14%), Positives = 37/131 (28%), Gaps = 1/131 (0%)

Query: 1   MIEEISHRRNSGLVHSVKESSYRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLL 60
            +        + L H +  S        ++        +    Q     S     E    
Sbjct: 169 CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPN 228

Query: 61  CSAVWDNKIREVEFLLSTG-DHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDR 119
                          L     + +N +  +G T L +A   G   +V  L+ +GA+    
Sbjct: 229 DKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIA 288

Query: 120 DEKGYTPLHLA 130
           ++ G  P+   
Sbjct: 289 NKSGLRPVDFG 299

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (248), Expect = 8e-24
 Identities = 62/367 (16%), Positives = 117/367 (31%), Gaps = 93/367 (25%)

Query: 89  DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEK-GYTPLHLACYLGNKNIVKFLLSKKA 147
           +    L  A+      +V  L+  GANVN ++E+ G+TPLH A  +  ++IV+ LL   A
Sbjct: 4   EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63

Query: 148 DVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKK 207
           D   +     T            +   +  +  L  +      +  F  F+    A V  
Sbjct: 64  DPVLRKKNGAT-------PFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYG 116

Query: 208 NLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSL 267
            +  ++ L K  A+ N                                D         + 
Sbjct: 117 KVKALKFLYKRGANVN-------------------------LRRKTKEDQERLRKGGATA 151

Query: 268 LHKACHVGNLQIVQMLVKRK-FDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINV 326
           L  A   G+++++++L+     D+NA +      +  A+                     
Sbjct: 152 LMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDV------------- 198

Query: 327 NLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAA 386
                                          + I   ++D   ++N  G+   TPL+ A 
Sbjct: 199 -------------------------------EAITHLLLDHGADVNVRGERGKTPLILAV 227

Query: 387 KHCDLQSAKYLI-QKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLL 445
           +   L   + L+ Q+   +N T             D   ++AL  A +     ++ +LL 
Sbjct: 228 EKKHLGLVQRLLEQEHIEINDT-------------DSDGKTALLLAVEL-KLKKIAELLC 273

Query: 446 LHGADVN 452
             GA  +
Sbjct: 274 KRGASTD 280

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.4 bits (236), Expect = 3e-22
 Identities = 61/272 (22%), Positives = 111/272 (40%), Gaps = 11/272 (4%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEK-LQDGRTALYMAILQGLYKMVTLLIHHGANV 116
            LL  AV +  +  V+ LL  G  +VN +  + G T L+ A+      +V LL+ HGA+ 
Sbjct: 7   HLLIKAVQNEDVDLVQQLLEGG-ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP 65

Query: 117 NDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNE 176
             R + G TP  LA   G+  ++K  LSK ADV        T  +  +      +     
Sbjct: 66  VLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLY 125

Query: 177 IISMLIENGANVREKMPFTD---FSPLHFAVVKKNLSVVELLI-KCKADTNLIVK--VNQ 230
                +      +E          + L  A  K ++ V+++L+ +  AD N       N 
Sbjct: 126 KRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNA 185

Query: 231 EPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRK-FD 289
                 + + + V+ +   L     DV++      + L  A    +L +VQ L++++  +
Sbjct: 186 LIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE 245

Query: 290 INAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQ 321
           IN  +      +  A+ +      +AE L ++
Sbjct: 246 INDTDSDGKTALLLAVELK--LKKIAELLCKR 275

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.9 bits (219), Expect = 4e-20
 Identities = 69/355 (19%), Positives = 122/355 (34%), Gaps = 77/355 (21%)

Query: 263 DLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYF-LPPMFFAIGMGRKHTHVAEYLLQQ 321
           + N LL KA    ++ +VQ L++   ++N Q       P+  A+ M      + E LL+ 
Sbjct: 4   EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMS--REDIVELLLRH 61

Query: 322 DSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITP 381
            +  V                           I    +++K  + +  ++N       T 
Sbjct: 62  GADPVL-------------RKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTA 108

Query: 382 LLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMV 441
            + AA +  +++ K+L ++GANVNL    K      R       +AL  A +   ++E++
Sbjct: 109 FMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGG---ATALMDAAEK-GHVEVL 164

Query: 442 KLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAH 501
           K+LL                                    GA ++  + +          
Sbjct: 165 KILLDE---------------------------------MGADVNACDNMGRNALIHALL 191

Query: 502 STTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWK 561
           S+ + +     + L                      ++ GA VNV  ER  + LI    K
Sbjct: 192 SSDDSDVEAITHLL----------------------LDHGADVNVRGERGKTPLILAVEK 229

Query: 562 GYEEIVDLLLD-NGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKD 615
            +  +V  LL+    ++N   + G TAL +A        I   L   GA  D  D
Sbjct: 230 KHLGLVQRLLEQEHIEINDTDSDGKTALLLAVE-LKLKKIAELLCKRGASTDCGD 283

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.5 bits (205), Expect = 3e-18
 Identities = 48/291 (16%), Positives = 103/291 (35%), Gaps = 35/291 (12%)

Query: 228 VNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDL-NSLLHKACHVGNLQIVQMLVKR 286
           V    LL  A+++  V +V+  L     +V+  + +   + LH A  +    IV++L++ 
Sbjct: 3   VEDNHLLIKAVQNEDVDLVQQLL-EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH 61

Query: 287 KFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDP 346
             D   + +    P   A   G             D    +         ++  +  K  
Sbjct: 62  GADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECD--FYGFTAFMEAAVYGKVK 119

Query: 347 KVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQK-GANVN 405
            +    +      + ++  +  E +   G    T L+ AA+   ++  K L+ + GA+VN
Sbjct: 120 ALKFLYKRGANVNLRRKTKEDQERLRKGGA---TALMDAAEKGHVEVLKILLDEMGADVN 176

Query: 406 LTETQKAFI------------------------SDARSSDFCFRSALQYACKHKNNIEMV 441
             +                              +D        ++ L  A +   ++ +V
Sbjct: 177 ACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEK-KHLGLV 235

Query: 442 KLLLLH-GADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYL 491
           + LL     ++NDT +   +  L +A++    +I + L   GA  D  + +
Sbjct: 236 QRLLEQEHIEINDTDSD-GKTALLLAVELKLKKIAELLCKRGASTDCGDLV 285

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.3 bits (202), Expect = 8e-18
 Identities = 65/281 (23%), Positives = 105/281 (37%), Gaps = 37/281 (13%)

Query: 380 TPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIE 439
             L+ A ++ D+   + L++ GANVN  E            +    + L  A +  +  +
Sbjct: 7   HLLIKAVQNEDVDLVQQLLEGGANVNFQE------------EEGGWTPLHNAVQM-SRED 53

Query: 440 MVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKN---KEA 496
           +V+LLL HGAD              +A  +G  +++K   + GA +++ ++       EA
Sbjct: 54  IVELLLRHGADPVLRKKNGATPF-LLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEA 112

Query: 497 ARIAHSTTELEERKKINDLLKLNLDFLKN--------------VRSNKYDEVKKNI-EDG 541
           A            K+  ++                              + +K  + E G
Sbjct: 113 AVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMG 172

Query: 542 ACVNVSSERRGSALIYVAWKG----YEEIVDLLLDNGADVNFKSATGFTALHMACRFHSN 597
           A VN       +ALI+          E I  LLLD+GADVN +   G T L +A      
Sbjct: 173 ADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHL 232

Query: 598 DNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
             + R L       +  D   GKT L  A   K + I +LL
Sbjct: 233 GLVQRLLEQEHIEINDTD-SDGKTALLLAVELKLKKIAELL 272

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.4 bits (197), Expect = 4e-17
 Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 1/93 (1%)

Query: 61  CSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMV-TLLIHHGANVNDR 119
             +  D+ +  +  LL     DVN + + G+T L +A+ +    +V  LL      +ND 
Sbjct: 190 LLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDT 249

Query: 120 DEKGYTPLHLACYLGNKNIVKFLLSKKADVRAK 152
           D  G T L LA  L  K I + L  + A     
Sbjct: 250 DSDGKTALLLAVELKLKKIAELLCKRGASTDCG 282

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.0 bits (196), Expect = 5e-17
 Identities = 53/218 (24%), Positives = 88/218 (40%), Gaps = 48/218 (22%)

Query: 88  QDGRTALYMAILQGLYKMVTLLIHHGANVNDRD----------EKGYTPLHLACYLGNKN 137
             G TA   A + G  K +  L   GANVN R           + G T L  A   G+  
Sbjct: 103 FYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVE 162

Query: 138 IVKFLLSKK-ADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTD 196
           ++K LL +  ADV A  +M    +  + A +S D +D   I  +L+++GA+V  +     
Sbjct: 163 VLKILLDEMGADVNACDNMGRNAL--IHALLSSDDSDVEAITHLLLDHGADVNVRGER-G 219

Query: 197 FSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFD 256
            +PL  AV KK+L +V+ L                                  L  ++ +
Sbjct: 220 KTPLILAVEKKHLGLVQRL----------------------------------LEQEHIE 245

Query: 257 VSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQN 294
           ++ +D D  + L  A  +   +I ++L KR    +  +
Sbjct: 246 INDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (145), Expect = 2e-10
 Identities = 21/63 (33%), Positives = 32/63 (50%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           T L  AV    +  V+ LL     ++N+   DG+TAL +A+   L K+  LL   GA+ +
Sbjct: 221 TPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 280

Query: 118 DRD 120
             D
Sbjct: 281 CGD 283

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.4 bits (140), Expect = 6e-10
 Identities = 53/278 (19%), Positives = 89/278 (32%), Gaps = 24/278 (8%)

Query: 426 SALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQI 485
             L  A ++  ++++V+ LL  GA+VN    +    PL  A+Q     IV+ L  +GA  
Sbjct: 7   HLLIKAVQN-EDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP 65

Query: 486 DKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVN 545
                         A              +  L L   K    N+ D         A V 
Sbjct: 66  VLRKKNGATPFLLAAI----------AGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVY 115

Query: 546 VSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLL 605
              +         A                D       G TAL  A     +  +++ LL
Sbjct: 116 GKVKALKFLYKRGANVNLRR------KTKEDQERLRKGGATALMDAAE-KGHVEVLKILL 168

Query: 606 -HHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMN 664
              GA  +  D       +    +  + D+  + HL+ +  A V N         + L  
Sbjct: 169 DEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV-NVRGERGKTPLILAV 227

Query: 665 SAKQLGLVHVFEIMKVV----KNYAGETLIGVARKMNY 698
             K LGLV      + +     +  G+T + +A ++  
Sbjct: 228 EKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKL 265

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 93.4 bits (231), Expect = 3e-21
 Identities = 38/328 (11%), Positives = 85/328 (25%), Gaps = 45/328 (13%)

Query: 36  EDAFGYFLQ-GIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDH----------DVN 84
           E+ F +F+    ++  +    E   +      N  +  + L     H          D +
Sbjct: 25  ENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAH 84

Query: 85  EKLQDGRTALYMAILQG---LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKF 141
           +K        ++A + G       + LL+     V     + Y    LA   G+ +++  
Sbjct: 85  KKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNR 144

Query: 142 LLSKKADVRAK--CSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKM--PFTDF 197
           L             +         + N      +       L E        M      +
Sbjct: 145 LCELAPTEIMAMIQAENYHAFRLAAENGHLHVLN------RLCELAPTEATAMIQAENYY 198

Query: 198 SPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEP--------LLFFAIESNSVKIV--- 246
           +    AV + + +V+  L+ C            E         +         +      
Sbjct: 199 AFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKL 258

Query: 247 ---EAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLP---- 299
              +   +       +    +   L +      L  ++ L+             +P    
Sbjct: 259 SNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDAN 318

Query: 300 -PMFFAIGMGRKHTHVAEYLLQQDSINV 326
             +  A+ +G  +      LL   S+  
Sbjct: 319 ELLRLALRLG--NQGACALLLSIPSVLA 344

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 78.4 bits (192), Expect = 3e-16
 Identities = 39/371 (10%), Positives = 83/371 (22%), Gaps = 64/371 (17%)

Query: 245 IVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFA 304
           + + F+++    +          +         Q+ Q+L       N   +         
Sbjct: 27  LFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKK 86

Query: 305 IGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRI 364
                    VA       +I            LDT+  L                     
Sbjct: 87  GIKSEVICFVA-------AITGCSSA------LDTLCLL--------------------- 112

Query: 365 IDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCF 424
           +   E +     +       AA++  L     L +                         
Sbjct: 113 LTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEI-----------MAMIQAEN 161

Query: 425 RSALQYACKHKNNIEMVKLLLLHGADVND--TSNKPKQKPLAVAIQSGDFQIVKELQNYG 482
             A + A ++  ++ ++  L              +        A+  G   ++  L +  
Sbjct: 162 YHAFRLAAEN-GHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP 220

Query: 483 AQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGA 542
             +                        + +N L +++  F  +     +D V K+     
Sbjct: 221 VMLAY----AEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKS----- 271

Query: 543 CVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSA-----TGFTALHMACRFHSN 597
              +        LI    +   + +  LL                     L +A R   N
Sbjct: 272 -ECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALR-LGN 329

Query: 598 DNIVRKLLHHG 608
                 LL   
Sbjct: 330 QGACALLLSIP 340

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 71.5 bits (174), Expect = 5e-14
 Identities = 35/311 (11%), Positives = 69/311 (22%), Gaps = 40/311 (12%)

Query: 344 KDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGAN 403
            DP++     I   +     I     ++          +         Q  + L    A+
Sbjct: 12  NDPQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAH 71

Query: 404 VNLTETQKAFISDARSSDFCFRSALQYACK--HKNNIEMVKLLLLHGADVNDTSNKPKQK 461
            N     K   SDA             A      + ++ + LLL     V     +   +
Sbjct: 72  YN--RNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAE-NYQ 128

Query: 462 PLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLD 521
              +A ++G   ++  L                  A    +                   
Sbjct: 129 AFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLN---------- 178

Query: 522 FLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKS 581
            L  +   +   + +     A                  +G+  +++ LLD    + +  
Sbjct: 179 RLCELAPTEATAMIQAENYYAF-----------RWAAVGRGHHNVINFLLDCPVMLAYAE 227

Query: 582 ATGFTALHMA-----CRFHSNDNIVRKLLHHGAYYDMKD---------GKTGKTPLKHAE 627
              F            R  +    +           + D         G      L    
Sbjct: 228 IHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRN 287

Query: 628 AGKNRDIIDLL 638
                D I  L
Sbjct: 288 DEVLLDDIRFL 298

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 69.9 bits (170), Expect = 2e-13
 Identities = 37/324 (11%), Positives = 80/324 (24%), Gaps = 24/324 (7%)

Query: 175 NEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVK------- 227
             +    I         + + +   +     K    V +LL    A  N   K       
Sbjct: 25  ENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAH 84

Query: 228 ---VNQEPLLFFAIESNSVKIVEA--FLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQM 282
              +  E + F A  +     ++    L + +  V +   +       A   G+L ++  
Sbjct: 85  KKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNR 144

Query: 283 LVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMS 342
           L +                 F +     H HV   L +         I+  N       +
Sbjct: 145 LCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAA 204

Query: 343 LKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGA 402
           +          I  L      +     +    G+  + P +    +   +          
Sbjct: 205 VGRGHHNV---INFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNP 261

Query: 403 NVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTS----NKP 458
           +       K          F     L      +  ++ ++ LL                 
Sbjct: 262 DGVFDLVTK----SECLQGFYMLRNLIRRN-DEVLLDDIRFLLSIPGIKALAPTATIPGD 316

Query: 459 KQKPLAVAIQSGDFQIVKELQNYG 482
             + L +A++ G+      L +  
Sbjct: 317 ANELLRLALRLGNQGACALLLSIP 340

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.0 bits (222), Expect = 6e-21
 Identities = 46/219 (21%), Positives = 85/219 (38%), Gaps = 12/219 (5%)

Query: 102 LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPIL 161
           L ++   ++   +     D+   T LH AC  G+  IV+FLL     V  K     +P+ 
Sbjct: 16  LEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPL- 74

Query: 162 AVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKAD 221
                    S   +EI+  L+  GA V         +PLH+A  K    +  +L++  A+
Sbjct: 75  -----HIAASAGRDEIVKALLGKGAQVNAVNQN-GCTPLHYAASKNRHEIAVMLLEGGAN 128

Query: 222 TNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQ 281
            +         +   A        +   L       +I D + N+ LH AC    ++  +
Sbjct: 129 PDAKDHYEATAMHRAAA--KGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAK 186

Query: 282 MLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQ 320
           +LV +   I  +N+    P+  A G       + + +++
Sbjct: 187 LLVSQGASIYIENKEEKTPLQVAKG---GLGLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.5 bits (187), Expect = 2e-16
 Identities = 32/153 (20%), Positives = 62/153 (40%), Gaps = 8/153 (5%)

Query: 65  WDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGY 124
                 E+   L      VN   Q+G T L+ A  +  +++  +L+  GAN + +D    
Sbjct: 78  ASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEA 137

Query: 125 TPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIEN 184
           T +H A   GN  ++  LL  KA    + +   TP+               E   +L+  
Sbjct: 138 TAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERV------EEAKLLVSQ 191

Query: 185 GANVREKMPFTDFSPLHFAVVKKNLSVVELLIK 217
           GA++  +    + +PL  A       +++ +++
Sbjct: 192 GASIYIENKE-EKTPLQVA-KGGLGLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.7 bits (164), Expect = 2e-13
 Identities = 43/237 (18%), Positives = 78/237 (32%), Gaps = 60/237 (25%)

Query: 434 HKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKN 493
           +   +E +K  +L    +   +++  +  L  A  +G  +IV+ L   G  ++ ++    
Sbjct: 12  YSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGW 71

Query: 494 KEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGS 553
                 A        R +I   L                     +  GA VN  ++   +
Sbjct: 72  SPLHIAAS-----AGRDEIVKAL---------------------LGKGAQVNAVNQNGCT 105

Query: 554 ALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALH------------------------ 589
            L Y A K   EI  +LL+ GA+ + K     TA+H                        
Sbjct: 106 PLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQ 165

Query: 590 --------MACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
                               + L+  GA   +++ K  KTPL+ A+ G    I+  +
Sbjct: 166 DTEGNTPLHLACDEERVEEAKLLVSQGASIYIEN-KEEKTPLQVAKGG-LGLILKRM 220

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.1 bits (160), Expect = 8e-13
 Identities = 42/250 (16%), Positives = 72/250 (28%), Gaps = 43/250 (17%)

Query: 356 RLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFIS 415
           +L+++ + I+           D  T L +A                            + 
Sbjct: 15  KLEELKESILADKSLATRTDQDSRTALHWACSA--------------GHTEIVEFLLQLG 60

Query: 416 DARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIV 475
              +       +  +        E+VK LL  GA VN   N+    PL  A      +I 
Sbjct: 61  VPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAV-NQNGCTPLHYAASKNRHEIA 119

Query: 476 KELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVK 535
             L   GA  D     K+   A   H        K I+ L                    
Sbjct: 120 VMLLEGGANPDA----KDHYEATAMHRAAAKGNLKMIHIL-------------------- 155

Query: 536 KNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFH 595
             +   A  N+      + L     +   E   LL+  GA +  ++    T L +A    
Sbjct: 156 --LYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAKGGL 213

Query: 596 SNDNIVRKLL 605
               I+++++
Sbjct: 214 --GLILKRMV 221

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.7 bits (151), Expect = 1e-11
 Identities = 42/234 (17%), Positives = 79/234 (33%), Gaps = 37/234 (15%)

Query: 265 NSLLHKACHVGNLQIV-QMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDS 323
           N ++    + G L+ + + ++  K      ++     + +A   G          L    
Sbjct: 4   NLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV 63

Query: 324 INVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLL 383
            + +     P               +        D+I+K ++ +   +NA   +  TPL 
Sbjct: 64  NDKDDAGWSP---------------LHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLH 108

Query: 384 FAAKHCDLQSAKYLIQKGANVNLT--ETQKAFISDARSSDFCFRSALQY----------- 430
           +AA     + A  L++ GAN +        A    A   +      L Y           
Sbjct: 109 YAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTE 168

Query: 431 ------ACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKEL 478
                     +  +E  KLL+  GA +    NK ++ PL VA + G   I+K +
Sbjct: 169 GNTPLHLACDEERVEEAKLLVSQGASIY-IENKEEKTPLQVA-KGGLGLILKRM 220

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (112), Expect = 2e-06
 Identities = 33/177 (18%), Positives = 62/177 (35%), Gaps = 35/177 (19%)

Query: 555 LIYVAWKG-YEEIVDLLLDNGADVNFKSATGFTALHMACR-------------------- 593
           +  +A+ G  EE+ + +L + +          TALH AC                     
Sbjct: 7   VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66

Query: 594 ------------FHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLI 641
                           D IV+ LL  GA  +  + + G TPL +A +    +I  +L L 
Sbjct: 67  DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVN-QNGCTPLHYAASKNRHEIAVML-LE 124

Query: 642 DNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKNYAGETLIGVARKMNY 698
                   + Y+    HR     + K + ++  ++    +++  G T + +A     
Sbjct: 125 GGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEER 181

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 90.2 bits (222), Expect = 2e-20
 Identities = 63/302 (20%), Positives = 110/302 (36%), Gaps = 26/302 (8%)

Query: 341 MSLKDPKVMSQTQIKRL---DQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYL 397
           M + D K     Q+KR    +  ++  + + +    + DD     L A    D +    L
Sbjct: 1   MKMADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDG-AVFLAACSSGDTEEVLRL 59

Query: 398 IQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNK 457
           +++GA++N               +    +AL  AC   N    +   L+      +  + 
Sbjct: 60  LERGADINYA-------------NVDGLTALHQACIDDN--VDMVKFLVENGANINQPDN 104

Query: 458 PKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLK 517
               PL  A   G   I + L + GA +   N   +           E   + ++N    
Sbjct: 105 EGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGV 164

Query: 518 LNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRG-SALIYVAWKGYEEIVDLLLDNGAD 576
                 K        + ++ +  G   +V   + G +AL   A KGY E++ LL+    D
Sbjct: 165 DIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD 224

Query: 577 VNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIID 636
           VN K   G+T LH A      +   R L+ +    +  + K G+T    A    + DI+ 
Sbjct: 225 VNIKDYDGWTPLHAAAH-WGKEEACRILVENLCDMEAVN-KVGQTAFDVA----DEDILG 278

Query: 637 LL 638
            L
Sbjct: 279 YL 280

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 75.1 bits (183), Expect = 2e-15
 Identities = 47/257 (18%), Positives = 85/257 (33%), Gaps = 24/257 (9%)

Query: 89  DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKAD 148
           D       A   G  + V  L+  GA++N  +  G T LH AC   N ++VKFL+   A+
Sbjct: 39  DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGAN 98

Query: 149 VRAKCSMMVTPIL--------------------AVSANMSEDSTDTNEIISMLIENGANV 188
           +    +    P+                       + N   D+         + E   N 
Sbjct: 99  INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNE 158

Query: 189 REKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEA 248
             +      +              + L     +     K     L          ++++ 
Sbjct: 159 VNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVA-AAKGYTEVLK- 216

Query: 249 FLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMG 308
            L    +DV+I D D  + LH A H G  +  ++LV+   D+ A N+        A    
Sbjct: 217 LLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDI 276

Query: 309 RKHTHVAEYLLQQDSIN 325
               ++ E   +Q+ ++
Sbjct: 277 LG--YLEELQKKQNLLH 291

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 68.2 bits (165), Expect = 4e-13
 Identities = 26/103 (25%), Positives = 49/103 (47%)

Query: 65  WDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGY 124
               +R+    L++G  +     + G TAL++A  +G  +++ LLI    +VN +D  G+
Sbjct: 174 ERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGW 233

Query: 125 TPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANM 167
           TPLH A + G +   + L+    D+ A   +  T       ++
Sbjct: 234 TPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDI 276

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 59.7 bits (143), Expect = 2e-10
 Identities = 54/294 (18%), Positives = 92/294 (31%), Gaps = 40/294 (13%)

Query: 189 REKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEA 248
           + K+ F D +    A    +   V  L++  AD N         L    I+ N    +  
Sbjct: 33  KTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDN--VDMVK 90

Query: 249 FLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMG 308
           FL     +++  D +    LH A   G L I + L+ +   + A N           G  
Sbjct: 91  FLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSE---------GDT 141

Query: 309 RKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRT 368
                  E + +     VN               +       + +   L    + +    
Sbjct: 142 PLDIAEEEAMEELLQNEVN------------RQGVDIEAARKEEERIMLRDARQWLNSGH 189

Query: 369 ENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSAL 428
            N         T L  AA     +  K LIQ   +VN+ +                 + L
Sbjct: 190 INDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDG-------------WTPL 236

Query: 429 QYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQS--GDFQIVKELQN 480
             A  H    E  ++L+ +  D+    NK  Q    VA +   G  + +++ QN
Sbjct: 237 HAAA-HWGKEEACRILVENLCDMEAV-NKVGQTAFDVADEDILGYLEELQKKQN 288

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 48.6 bits (114), Expect = 1e-06
 Identities = 34/158 (21%), Positives = 58/158 (36%), Gaps = 11/158 (6%)

Query: 507 EERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEI 566
           + ++K N+ LK  +    ++        K  ++            G+  +     G  E 
Sbjct: 5   DAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFD---------DGAVFLAACSSGDTEE 55

Query: 567 VDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHA 626
           V  LL+ GAD+N+ +  G TALH AC    ++  + K L        +    G  PL  A
Sbjct: 56  VLRLLERGADINYANVDGLTALHQAC--IDDNVDMVKFLVENGANINQPDNEGWIPLHAA 113

Query: 627 EAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMN 664
            +    DI + L        +V +  D  +    E   
Sbjct: 114 ASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAM 151

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 85.1 bits (209), Expect = 4e-19
 Identities = 39/250 (15%), Positives = 79/250 (31%), Gaps = 27/250 (10%)

Query: 89  DGRTALYMAILQGLYKMVTLLIHHGAN---VNDRDEKGYTPLHLACYLGNKNIVKFLLSK 145
           DG TAL++A++      +  L+   A    ++ +++ G T LHLA  LG  + V+ L + 
Sbjct: 8   DGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAA 67

Query: 146 KADVRAKCSMMVTPI-LAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSP----- 199
            A V        T + LA            +    +L++   +       T  +      
Sbjct: 68  GAGVLVAERGGHTALHLACRVRA-------HTCACVLLQPRPSHPRDASDTYLTQSQDCT 120

Query: 200 --------LHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLN 251
                      +               +         +    L  A+     ++V    +
Sbjct: 121 PDTSHAPAAVDSQPNPENEEEPRDEDWRLQLE-AENYDGHTPLHVAVIHKDAEMVRLLRD 179

Query: 252 SKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKH 311
           +             + LH A       ++++L+K   D  A+      P+  A+     +
Sbjct: 180 AGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRP--N 237

Query: 312 THVAEYLLQQ 321
             +A  L   
Sbjct: 238 PILARLLRAH 247

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 82.4 bits (202), Expect = 4e-18
 Identities = 41/263 (15%), Positives = 70/263 (26%), Gaps = 36/263 (13%)

Query: 376 DDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHK 435
           +D  T L  A  H       +L+   A     + Q          +   ++AL  A    
Sbjct: 7   EDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQ----------NDLGQTALHLAAILG 56

Query: 436 NNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE 495
               + KL       +           LA   +         L        ++       
Sbjct: 57  EASTVEKLYAAGAGVLVAERGGHTALHLA--CRVRAHTCACVLLQPRPSHPRDASDTYLT 114

Query: 496 AARIAHSTTELE------ERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSE 549
            ++     T         +    N+    + D+   + +  YD            +    
Sbjct: 115 QSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMV 174

Query: 550 RRG----------------SALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACR 593
           R                  + L          +++LLL  GAD   +   G T L  A  
Sbjct: 175 RLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALL 234

Query: 594 FHSNDNIVRKLLHHGAYYDMKDG 616
              N  + R L  HGA  + +DG
Sbjct: 235 -RPNPILARLLRAHGA-PEPEDG 255

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 79.7 bits (195), Expect = 4e-17
 Identities = 40/259 (15%), Positives = 75/259 (28%), Gaps = 17/259 (6%)

Query: 197 FSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQ--EPLLFFAIESNSVKIVEAFLNSKN 254
            + LH AV+ ++   ++ L+   A    +   N   +  L  A        VE    +  
Sbjct: 10  DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKL-YAAG 68

Query: 255 FDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHV 314
             V +++   ++ LH AC V       +L++ +                       H   
Sbjct: 69  AGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPA 128

Query: 315 AEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAE 374
           A               +   L L+         +      K  + +        +    E
Sbjct: 129 AVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPE 188

Query: 375 GDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKH 434
                TPL  A +       + L++ GA+                  +  R+ L  A   
Sbjct: 189 PTCGRTPLHLAVEAQAASVLELLLKAGADPTAR-------------MYGGRTPLGSALLR 235

Query: 435 KNNIEMVKLLLLHGADVND 453
             N  + +LL  HGA   +
Sbjct: 236 -PNPILARLLRAHGAPEPE 253

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 75.1 bits (183), Expect = 1e-15
 Identities = 53/239 (22%), Positives = 84/239 (35%), Gaps = 12/239 (5%)

Query: 58  TLLCSAVWDNKIREVEFLLSTG--DHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGAN 115
           T L  AV       ++FLL        ++ +   G+TAL++A + G    V  L   GA 
Sbjct: 11  TALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG 70

Query: 116 VNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILA--------VSANM 167
           V   +  G+T LHLAC +        LL  +       S                  A +
Sbjct: 71  VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAV 130

Query: 168 SEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVK 227
                  NE      +    +  +      +PLH AV+ K+  +V LL    AD N    
Sbjct: 131 DSQPNPENEEEPRDEDWRLQLEAENYD-GHTPLHVAVIHKDAEMVRLLRDAGADLNKPEP 189

Query: 228 VNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKR 286
                 L  A+E+ +  ++E  L     D +       + L  A    N  + ++L   
Sbjct: 190 TCGRTPLHLAVEAQAASVLELLL-KAGADPTARMYGGRTPLGSALLRPNPILARLLRAH 247

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 72.0 bits (175), Expect = 1e-14
 Identities = 37/287 (12%), Positives = 71/287 (24%), Gaps = 47/287 (16%)

Query: 120 DEKGYTPLHLACYLGNKNIVKFLLSKKAD---VRAKCSMMVTPI-LAVSANMSEDSTDTN 175
            E G T LHLA    ++  + FLL   A    +  +  +  T + LA             
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILG--------E 57

Query: 176 EIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLF 235
                 +               + LH A   +  +   +L++ +       +   +  L 
Sbjct: 58  ASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHP---RDASDTYLT 114

Query: 236 FAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNR 295
            + +                     D         +      +        +  + A+N 
Sbjct: 115 QSQDCTP------------------DTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENY 156

Query: 296 YFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIK 355
               P+  A+                D         R  L L                  
Sbjct: 157 DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAAS---------- 206

Query: 356 RLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGA 402
               +++ ++    +  A      TPL  A    +   A+ L   GA
Sbjct: 207 ----VLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGA 249

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 65.1 bits (157), Expect = 3e-12
 Identities = 25/91 (27%), Positives = 36/91 (39%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           T L  AV       V  L   G      +   GRT L++A+      ++ LL+  GA+  
Sbjct: 160 TPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPT 219

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKAD 148
            R   G TPL  A    N  + + L +  A 
Sbjct: 220 ARMYGGRTPLGSALLRPNPILARLLRAHGAP 250

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.9 bits (102), Expect = 3e-05
 Identities = 31/233 (13%), Positives = 70/233 (30%), Gaps = 18/233 (7%)

Query: 261 DGDLNSLLHKACHVGNLQIVQMLVKRKFD---INAQNRYFLPPMFFAIGMGRKHTHVAEY 317
             D ++ LH A    +   +  L+        ++ QN      +  A  +G   T    Y
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65

Query: 318 LLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDD 377
                 +           L   V +     V+ Q +           + ++++   +   
Sbjct: 66  AAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPD-TS 124

Query: 378 MITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNN 437
                + +  + + +           +               ++        +      +
Sbjct: 125 HAPAAVDSQPNPENEEEPRDEDWRLQLE--------------AENYDGHTPLHVAVIHKD 170

Query: 438 IEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENY 490
            EMV+LL   GAD+N       + PL +A+++    +++ L   GA      Y
Sbjct: 171 AEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMY 223

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.2 bits (95), Expect = 2e-04
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 3/51 (5%)

Query: 578 NFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKT--GKTPLKHA 626
            + +  G TALH+A   H ++  +  LL   A ++  D +   G+T L  A
Sbjct: 3   GYVTEDGDTALHLAVI-HQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLA 52

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.1 bits (206), Expect = 6e-19
 Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 8/226 (3%)

Query: 89  DGRTALYMAILQGLYKMVTLLI----HHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLS 144
           DG T L++A++QG    V  L+      G  ++  +    TPLHLA      ++V+ L++
Sbjct: 2   DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVT 61

Query: 145 KKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAV 204
             A   A      T            S      +      G    E   +   + LH AV
Sbjct: 62  AGASPMALDRHGQTAA---HLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAV 118

Query: 205 VKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDL 264
             +    V+LL++  AD + +   +    L  A+E+NS+ +V+  L     +V+      
Sbjct: 119 NTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQ-LLLQHGANVNAQMYSG 177

Query: 265 NSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRK 310
           +S LH A   G L +V+ LV+   D + +N +   P+  A      
Sbjct: 178 SSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVI 223

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.3 bits (165), Expect = 2e-13
 Identities = 44/243 (18%), Positives = 84/243 (34%), Gaps = 32/243 (13%)

Query: 376 DDMITPLLFAAKHCDLQSAKYLI----QKGANVNLTETQKAFISDARSSDFCFRSALQYA 431
           +D  TPL  A    +L +   L+    Q G  +++              +   ++ L  A
Sbjct: 1   EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIY-------------NNLRQTPLHLA 47

Query: 432 CKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYL 491
                   +  L+           ++  Q    +A +      ++ L +  A    +   
Sbjct: 48  VITTLPSVVRLLV--TAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEA 105

Query: 492 KNKEAARIAHSTTELEERKKINDLLKLNLDFLKN------------VRSNKYDEVKKNIE 539
           +N +     H     E ++ +  LL+   D                V +N    V+  ++
Sbjct: 106 RNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQ 165

Query: 540 DGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDN 599
            GA VN       SAL   + +G   +V  L+ +GAD + K+    T L +A       +
Sbjct: 166 HGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARS-RRVID 224

Query: 600 IVR 602
           I+R
Sbjct: 225 ILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.8 bits (161), Expect = 5e-13
 Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 7/227 (3%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDH---DVNEKLQDGRTALYMAILQGLYKMVTLLIHHGA 114
           T L  AV    +  V  L++       +++      +T L++A++  L  +V LL+  GA
Sbjct: 5   TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGA 64

Query: 115 NVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDT 174
           +    D  G T  HLAC   +   ++ LL   A       +       ++A     +T+ 
Sbjct: 65  SPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGT--LDLEARNYDGLTALHVAVNTEC 122

Query: 175 NEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLL 234
            E + +L+E GA++      +  SPL  AV   +LS+V+LL++  A+ N     +    L
Sbjct: 123 QETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVN-AQMYSGSSAL 181

Query: 235 FFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQ 281
             A     + +V   L     D S+ +   ++ L  A     + I++
Sbjct: 182 HSASGRGLLPLVR-TLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (118), Expect = 2e-07
 Identities = 35/249 (14%), Positives = 81/249 (32%), Gaps = 30/249 (12%)

Query: 198 SPLHFAVVKKNLSVVELLIK----CKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSK 253
           +PLH AVV+ NL  V  L+        + ++   + Q PL    I +    +        
Sbjct: 5   TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGA 64

Query: 254 NFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTH 313
           +       G   + L             +       ++ + R +       + +  +   
Sbjct: 65  SPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQE 124

Query: 314 VAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINA 373
             + LL++ +    + IK     L   +                  +++ ++    N+NA
Sbjct: 125 TVQLLLERGADIDAVDIKSGRSPLIHAVE------------NNSLSMVQLLLQHGANVNA 172

Query: 374 EGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACK 433
           +     + L  A+    L   + L++ GA+ +L              +    + L  A  
Sbjct: 173 QMYSGSSALHSASGRGLLPLVRTLVRSGADSSLK-------------NCHNDTPLMVARS 219

Query: 434 HKNNIEMVK 442
            +  I++++
Sbjct: 220 -RRVIDILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (102), Expect = 2e-05
 Identities = 9/65 (13%), Positives = 22/65 (33%), Gaps = 4/65 (6%)

Query: 553 SALIYVAWKGYEEIVDLLLD----NGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHG 608
           + L     +G    V  L++     G +++  +    T LH+A        +   +    
Sbjct: 5   TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGA 64

Query: 609 AYYDM 613
           +   +
Sbjct: 65  SPMAL 69

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 77.1 bits (188), Expect = 1e-16
 Identities = 46/216 (21%), Positives = 79/216 (36%), Gaps = 11/216 (5%)

Query: 104 KMVTLLIHHGANVNDR-DEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILA 162
           ++++ L+  GA +N   D+ G T LHLA      +  K LL   AD  ++ +   TP   
Sbjct: 3   QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTP--- 59

Query: 163 VSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADT 222
                +  + D   +  +L+ N A           +PL  A       +VE LI   AD 
Sbjct: 60  ---LHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADI 116

Query: 223 NLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQM 282
           N      +  L + A  +N+  +    ++  N D    D    + L  A   G+ +  + 
Sbjct: 117 NAADNSGKTALHWAAAVNNTEAVNILLMHHANRD--AQDDKDETPLFLAAREGSYEASKA 174

Query: 283 LVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYL 318
           L+    +    +     P   A      H  +   L
Sbjct: 175 LLDNFANREITDHMDRLPRDVASERL--HHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 76.8 bits (187), Expect = 2e-16
 Identities = 40/208 (19%), Positives = 80/208 (38%), Gaps = 10/208 (4%)

Query: 439 EMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAAR 498
           +++  LL  GA++N T +K  +  L +A +       K L + GA  + ++         
Sbjct: 3   QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 62

Query: 499 IAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIED--------GACVNVSSER 550
              +      +  + +        + +  +      +  IE          A +N +   
Sbjct: 63  AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 122

Query: 551 RGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAY 610
             +AL + A     E V++LL + A+ + +     T L +A R  S +   + LL + A 
Sbjct: 123 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYE-ASKALLDNFAN 181

Query: 611 YDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
            ++ D    + P   A    + DI+ LL
Sbjct: 182 REITD-HMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 62.1 bits (149), Expect = 1e-11
 Identities = 35/224 (15%), Positives = 75/224 (33%), Gaps = 16/224 (7%)

Query: 174 TNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPL 233
           T ++IS L+  GA +   M  T  + LH A         + L+   AD N          
Sbjct: 1   TAQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADAN-SQDNTGRTP 59

Query: 234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQ 293
           L  A+ ++++ + +  L ++  +++    D  + L  A  +    +V+ L+    DINA 
Sbjct: 60  LHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAA 119

Query: 294 NRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQ 353
           +      + +A  +          +   +    +   + P               +    
Sbjct: 120 DNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETP---------------LFLAA 164

Query: 354 IKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYL 397
            +   +  K ++D   N          P   A++       + L
Sbjct: 165 REGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 62.1 bits (149), Expect = 2e-11
 Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 1/85 (1%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
           T L  A   N    V  L      + + +     T L++A  +G Y+    L+ + AN  
Sbjct: 125 TALHWAAAVNNTEAVNIL-LMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANRE 183

Query: 118 DRDEKGYTPLHLACYLGNKNIVKFL 142
             D     P  +A    + +IV+ L
Sbjct: 184 ITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 59.8 bits (143), Expect = 1e-10
 Identities = 40/217 (18%), Positives = 64/217 (29%), Gaps = 21/217 (9%)

Query: 395 KYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDT 454
             L+ +GA +N T             D    ++L  A +     +  K LL  GAD N  
Sbjct: 6   SDLLAQGAELNATM------------DKTGETSLHLAARF-ARADAAKRLLDAGADANSQ 52

Query: 455 SNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKIND 514
            N  +    A             L+N    ++   +         A    E      I  
Sbjct: 53  DNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITA 112

Query: 515 LLKLNL-------DFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIV 567
              +N                N  + V   +   A  +   ++  + L   A +G  E  
Sbjct: 113 DADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEAS 172

Query: 568 DLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKL 604
             LLDN A+             +A     + +IVR L
Sbjct: 173 KALLDNFANREITDHMDRLPRDVASE-RLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 51.7 bits (122), Expect = 5e-08
 Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 1/92 (1%)

Query: 76  LSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGN 135
           L T D D+N     G+TAL+ A      + V +L+ H AN + +D+K  TPL LA   G+
Sbjct: 109 LITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGS 168

Query: 136 KNIVKFLLSKKADVRAKCSMMVTPI-LAVSAN 166
               K LL   A+      M   P  +A    
Sbjct: 169 YEASKALLDNFANREITDHMDRLPRDVASERL 200

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 51.7 bits (122), Expect = 5e-08
 Identities = 42/213 (19%), Positives = 77/213 (36%), Gaps = 10/213 (4%)

Query: 72  VEFLLSTGDHDVNEKL-QDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLA 130
           +  LL+ G  ++N  + + G T+L++A           L+  GA+ N +D  G TPLH A
Sbjct: 5   ISDLLAQG-AELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAA 63

Query: 131 CYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVRE 190
                  + +             ++        +  +         ++  LI   A++  
Sbjct: 64  VAADAMGVFQI-----LLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINA 118

Query: 191 KMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFL 250
                  + LH+A    N   V +L+   A+ +       E  LF A    S +  +A L
Sbjct: 119 ADNS-GKTALHWAAAVNNTEAVNILLMHHANRD-AQDDKDETPLFLAAREGSYEASKALL 176

Query: 251 NSKNFDVSISDGDLNSLLHKACHVGNLQIVQML 283
                +  I+D         A    +  IV++L
Sbjct: 177 -DNFANREITDHMDRLPRDVASERLHHDIVRLL 208

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 76.3 bits (186), Expect = 8e-16
 Identities = 38/269 (14%), Positives = 83/269 (30%), Gaps = 30/269 (11%)

Query: 72  VEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHH--------GANVNDRDEKG 123
            E +     + ++ +    RT L+        +    LI H        GA+VN  D   
Sbjct: 17  TEPITRESVNIIDPR--HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDE 74

Query: 124 YTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIE 183
            TPL LA     + +V +L+   AD         +            +     ++  ++ 
Sbjct: 75  NTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSA------LHQAAANRDFGMMVYMLN 128

Query: 184 NGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNL------------IVKVNQE 231
           +     +             +V  N    ++                        K    
Sbjct: 129 STKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGR 188

Query: 232 PLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDIN 291
             L +A + +++ IV+  +  K  +    D D  + +  A   G +++V  L+++   + 
Sbjct: 189 TALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVE 248

Query: 292 AQNRYFLPPMFFAIGMGRKHTHVAEYLLQ 320
           A +         A      H ++ +   +
Sbjct: 249 AVDATDHTARQLAQANN--HHNIVDIFDR 275

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 75.5 bits (184), Expect = 1e-15
 Identities = 27/124 (21%), Positives = 48/124 (38%)

Query: 20  SSYRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTG 79
           +        +      E        G     S K    T L  A   + +  V++L+   
Sbjct: 151 AHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEK 210

Query: 80  DHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIV 139
             + +++ +DG+T + +A  +G  ++V  LI  GA+V   D   +T   LA    + NIV
Sbjct: 211 GSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIV 270

Query: 140 KFLL 143
               
Sbjct: 271 DIFD 274

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 70.5 bits (171), Expect = 7e-14
 Identities = 47/297 (15%), Positives = 96/297 (32%), Gaps = 33/297 (11%)

Query: 158 TPI-LAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELL- 215
           +PI L   A        +  I   +     N+ +  P  + + LH+     +    E L 
Sbjct: 2   SPIKLHTEA------AGSYAITEPITRESVNIID--PRHNRTVLHWIASNSSAEKSEDLI 53

Query: 216 -------IKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLL 268
                  I   AD N +      PL+   +     + + A+L     D +I +    S L
Sbjct: 54  VHEAKECIAAGADVNAMDCDENTPLMLAVL--ARRRRLVAYLMKAGADPTIYNKSERSAL 111

Query: 269 HKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNL 328
           H+A    +  ++  ++                M   + +            +        
Sbjct: 112 HQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAK 171

Query: 329 PIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKH 388
                    D+        +    Q+  +  +   + ++  N + + +D  TP++ AA+ 
Sbjct: 172 VDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQE 231

Query: 389 CDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLL 445
             ++   YLIQ+GA+V                D    +A Q A  + N+  +V +  
Sbjct: 232 GRIEVVMYLIQQGASVEAV-------------DATDHTARQLAQAN-NHHNIVDIFD 274

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 65.5 bits (158), Expect = 3e-12
 Identities = 44/275 (16%), Positives = 86/275 (31%), Gaps = 41/275 (14%)

Query: 358 DQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYL--------IQKGANVNLTET 409
             I + I   + NI     +  T L + A +   + ++ L        I  GA+VN  + 
Sbjct: 14  YAITEPITRESVNIIDPRHNR-TVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDC 72

Query: 410 QK-------------------AFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGAD 450
            +                          +       +  +      +  M+  +L     
Sbjct: 73  DENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKL 132

Query: 451 VNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERK 510
             D     +    A+ I +          N G        L  ++ A++ +     ++ +
Sbjct: 133 KGDIEELDRNGMTALMIVA---------HNEGRDQVASAKLLVEKGAKVDYDGAARKDSE 183

Query: 511 KINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLL 570
           K      L+     +   N         E G+  +   E   + ++  A +G  E+V  L
Sbjct: 184 KYKGRTALHYAAQVS---NMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYL 240

Query: 571 LDNGADVNFKSATGFTALHMACRFHSNDNIVRKLL 605
           +  GA V    AT  TA  +A   +++ NIV    
Sbjct: 241 IQQGASVEAVDATDHTARQLAQA-NNHHNIVDIFD 274

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 65.1 bits (157), Expect = 3e-12
 Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 41/140 (29%)

Query: 81  HDVNEKLQDGRTALYMAILQGLYKMV-TLLIHHGANVNDRDEKGYTPLHLACYLGNKNIV 139
              + +   GRTAL+ A       +V  L+   G+N + +DE G TP+ LA   G   +V
Sbjct: 178 ARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVV 237

Query: 140 KFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSP 199
            +L+ + A V A  +   T                                         
Sbjct: 238 MYLIQQGASVEAVDATDHT----------------------------------------A 257

Query: 200 LHFAVVKKNLSVVELLIKCK 219
              A    + ++V++  +C+
Sbjct: 258 RQLAQANNHHNIVDIFDRCR 277

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 65.1 bits (157), Expect = 4e-12
 Identities = 43/289 (14%), Positives = 90/289 (31%), Gaps = 47/289 (16%)

Query: 380 TPLLFAAKHCD-LQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNI 438
           +P+    +        + + ++  N+                    R+ L +   + ++ 
Sbjct: 2   SPIKLHTEAAGSYAITEPITRESVNIIDPRHN--------------RTVLHWIASN-SSA 46

Query: 439 EMVKLLLLH--------GADVNDTSNK-------------------PKQKPLAVAIQSGD 471
           E  + L++H        GADVN                          +      I +  
Sbjct: 47  EKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKS 106

Query: 472 FQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKY 531
            +                Y+ N    +      +      +  +                
Sbjct: 107 ERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLV 166

Query: 532 DEVKKNIEDGACVNVSSERRG-SALIYVAWKGYEEIV-DLLLDNGADVNFKSATGFTALH 589
           ++  K   DGA    S + +G +AL Y A      IV  L+ + G++ + +   G T + 
Sbjct: 167 EKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIM 226

Query: 590 MACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
           +A +      +V  L+  GA  +  D  T  T  + A+A  + +I+D+ 
Sbjct: 227 LAAQ-EGRIEVVMYLIQQGASVEAVD-ATDHTARQLAQANNHHNIVDIF 273

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 65.1 bits (157), Expect = 4e-12
 Identities = 49/355 (13%), Positives = 103/355 (29%), Gaps = 84/355 (23%)

Query: 125 TPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIEN 184
           +P+ L                                        ++  +  I   +   
Sbjct: 2   SPIKLHT--------------------------------------EAAGSYAITEPITRE 23

Query: 185 GANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVK 244
             N+ +  P  + + LH+     +    E LI  +A   +                    
Sbjct: 24  SVNIID--PRHNRTVLHWIASNSSAEKSEDLIVHEAKECI-------------------- 61

Query: 245 IVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFA 304
                  +   DV+  D D N+ L  A      ++V  L+K   D    N+     +  A
Sbjct: 62  -------AAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQA 114

Query: 305 IGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVM-SLKDPKVMSQTQIKRLDQIIKR 363
                    +  Y+L    +  ++     N +   ++ +  + +    +    +++  K 
Sbjct: 115 AANR--DFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKV 172

Query: 364 IIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFC 423
             D     ++E     T L +AA+  ++   KYL+ +  +                 D  
Sbjct: 173 DYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNK------------DKQDED 220

Query: 424 FRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKEL 478
            ++ +  A +    IE+V  L+  GA V             +A  +    IV   
Sbjct: 221 GKTPIMLAAQE-GRIEVVMYLIQQGASVEAVDAT-DHTARQLAQANNHHNIVDIF 273

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 58.6 bits (140), Expect = 6e-10
 Identities = 42/323 (13%), Positives = 75/323 (23%), Gaps = 64/323 (19%)

Query: 92  TALYMAI-LQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKK---- 146
           + + +     G Y +   +     N+ D      T LH      +    + L+  +    
Sbjct: 2   SPIKLHTEAAGSYAITEPITRESVNIID-PRHNRTVLHWIASNSSAEKSEDLIVHEAKEC 60

Query: 147 ----ADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHF 202
               ADV A      TP++                                    +   F
Sbjct: 61  IAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDF 120

Query: 203 AVVKKNLSVVELLIKCKADTNLIVKVNQ-----EPLLFFAIESNSVKIVEAFLNSKNFDV 257
            ++   L+  +L    +      +         E     A     V+             
Sbjct: 121 GMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARK 180

Query: 258 SISDGDLNSLLHKACHVGNLQIVQMLVKRK-FDINAQNRYFLPPMFFAIGMGRKHTHVAE 316
                   + LH A  V N+ IV+ LV  K  + + Q+     P+  A   G     V  
Sbjct: 181 DSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEG--RIEVVM 238

Query: 317 YLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGD 376
           YL+QQ +                                              ++ A   
Sbjct: 239 YLIQQGA----------------------------------------------SVEAVDA 252

Query: 377 DMITPLLFAAKHCDLQSAKYLIQ 399
              T    A  +          +
Sbjct: 253 TDHTARQLAQANNHHNIVDIFDR 275

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 40.5 bits (93), Expect = 4e-04
 Identities = 25/168 (14%), Positives = 48/168 (28%), Gaps = 11/168 (6%)

Query: 526 VRSNKYDEVKKNIEDGACVNVSSERRG-SALIYVAWKGYEEIVDLLLDN--------GAD 576
             +     + + I     VN+   R   + L ++A     E  + L+ +        GAD
Sbjct: 8   TEAAGSYAITEPITR-ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD 66

Query: 577 VNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIID 636
           VN       T L +A        +   L+  GA   + +        + A       ++ 
Sbjct: 67  VNAMDCDENTPLMLAVLARRRRLV-AYLMKAGADPTIYNKSERSALHQAAANRDFGMMVY 125

Query: 637 LLHLIDNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKNY 684
           +L+             +      I   N  +         + K  K  
Sbjct: 126 MLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVD 173

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 69.1 bits (167), Expect = 9e-14
 Identities = 48/232 (20%), Positives = 84/232 (36%), Gaps = 10/232 (4%)

Query: 92  TALYMAILQGLYKMVT-LLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVR 150
             L+ A ++  +  V  LL    + +  +D+ G  PLH +       I  FLLSK  +V 
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61

Query: 151 AKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLS 210
                  +       +++    +   + S+          K+     + LH AV KK   
Sbjct: 62  LDDYPDDSGW--TPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFE 119

Query: 211 VVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHK 270
           V + LI+  A   +  K NQ PL        S+K++E         V+  D    + L  
Sbjct: 120 VSQFLIENGASVRIKDKFNQIPLHRA-ASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFH 178

Query: 271 ACHVGNLQIVQMLV-KRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQ 321
           A   G+     +LV K   + +  +         A+     +  V ++ L  
Sbjct: 179 ALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL-----NEQVKKFFLNN 225

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.4 bits (147), Expect = 4e-11
 Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 4/128 (3%)

Query: 22  YRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDH 81
                L   +     +   + ++   +           L  A     ++ +E L   G  
Sbjct: 104 QGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKS 163

Query: 82  DVNEKLQDGRTALYMAILQGLYKMVTLLI-HHGANVNDRDEKGYTPLHLACYLGNKNIVK 140
            VN + + G T L+ A+ +G      LL+  +GA  +  D KG     +A    N+ + K
Sbjct: 164 AVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKK 220

Query: 141 FLLSKKAD 148
           F L+   D
Sbjct: 221 FFLNNVVD 228

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 60.6 bits (145), Expect = 7e-11
 Identities = 46/230 (20%), Positives = 82/230 (35%), Gaps = 5/230 (2%)

Query: 60  LCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDR 119
           L  A  +N+  +V+ LL +    + +K QDGR  L+ ++    +++ + L+    NVN  
Sbjct: 4   LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD 63

Query: 120 DEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIIS 179
           D    +      ++        ++    D   K  +       V+           E+  
Sbjct: 64  DYPDDSG-WTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 122

Query: 180 MLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIE 239
            LIENGA+VR K  F +  PLH A    +L ++ELL                  LF A+ 
Sbjct: 123 FLIENGASVRIKDKF-NQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALA 181

Query: 240 SNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFD 289
                     +     +  + D         A +    Q+ +  +    D
Sbjct: 182 EGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN---EQVKKFFLNNVVD 228

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 59.8 bits (143), Expect = 1e-10
 Identities = 39/225 (17%), Positives = 69/225 (30%), Gaps = 18/225 (8%)

Query: 427 ALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYG---- 482
            L  AC   N    V+ LL     +    ++  + PL  ++     +I   L +      
Sbjct: 3   PLHQACME-NEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61

Query: 483 --------AQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEV 534
                                   +        +        +        V    ++  
Sbjct: 62  LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 121

Query: 535 KKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNG-ADVNFKSATGFTALHMACR 593
           +  IE+GA V +  +     L   A  G  ++++LL   G + VN++   G+T L  A  
Sbjct: 122 QFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALA 181

Query: 594 FHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
               D  V  +  +GA YD+ D   G      A    N  +    
Sbjct: 182 EGHGDAAVLLVEKYGAEYDLVD-NKGAKAEDVA---LNEQVKKFF 222

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.9 bits (138), Expect = 6e-10
 Identities = 35/242 (14%), Positives = 63/242 (26%), Gaps = 42/242 (17%)

Query: 234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQ 293
           L  A   N    V+  L+SK   +   D D    LH +      +I   L+ +  ++N  
Sbjct: 4   LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD 63

Query: 294 NRYFLPPMFFAIGMGRKHTHVAEYL------------------LQQDSINVNLPIKRPNL 335
           +                                                      +    
Sbjct: 64  DYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQF 123

Query: 336 LLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTEN------INAEGDDMITPLLFAAKHC 389
           L++   S++     +Q  + R   +    +           +N +     TPL  A    
Sbjct: 124 LIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEG 183

Query: 390 DLQSAKYLIQK-GANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHG 448
              +A  L++K GA  +L              D     A   A       ++ K  L + 
Sbjct: 184 HGDAAVLLVEKYGAEYDLV-------------DNKGAKAEDVALNE----QVKKFFLNNV 226

Query: 449 AD 450
            D
Sbjct: 227 VD 228

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.0 bits (133), Expect = 2e-09
 Identities = 30/244 (12%), Positives = 66/244 (27%), Gaps = 32/244 (13%)

Query: 380 TPLLFAAKHCDLQSAKYLI-QKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNI 438
            PL  A    +    + L+  K + +                D   R  L ++       
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLL-------------QKDQDGRIPLHWSVSF-QAH 47

Query: 439 EMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAAR 498
           E+   LL    +VN              I      +      Y   +  +      +   
Sbjct: 48  EITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVT 107

Query: 499 IAHSTTELEERKKINDLLKLNLDF------------LKNVRSNKYDEVKKNIEDGACVNV 546
             H     +  +    L++                       +            + VN 
Sbjct: 108 CLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNW 167

Query: 547 SSERRGSALIYVAWKGYEEIVDLLLDN-GADVNFKSATGFTALHMACRFHSNDNIVRKLL 605
             ++  + L +   +G+ +   LL++  GA+ +     G  A  +A     N+ + +  L
Sbjct: 168 QDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL----NEQVKKFFL 223

Query: 606 HHGA 609
           ++  
Sbjct: 224 NNVV 227

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.3 bits (113), Expect = 1e-06
 Identities = 30/231 (12%), Positives = 69/231 (29%), Gaps = 16/231 (6%)

Query: 265 NSLLHKACHVGNLQIVQMLVKRK-FDINAQNRYFLPPMFFAIGMGR--------KHTHVA 315
           N  LH+AC       VQ L+  K   +  +++    P+ +++                  
Sbjct: 1   NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV 60

Query: 316 EYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEG 375
                 D           ++    V+     + +     K  +Q +  +         E 
Sbjct: 61  NLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEV 120

Query: 376 DDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDF--CFRSALQYACK 433
              +     + +  D  +   L +  +  +L   +        + ++         +   
Sbjct: 121 SQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHAL 180

Query: 434 HKNNIEMVKLLLL-HGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGA 483
            + + +   LL+  +GA+ +   NK   K   VA+     Q+ K   N   
Sbjct: 181 AEGHGDAAVLLVEKYGAEYDLVDNK-GAKAEDVALNE---QVKKFFLNNVV 227

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.5 bits (160), Expect = 6e-13
 Identities = 39/205 (19%), Positives = 74/205 (36%), Gaps = 6/205 (2%)

Query: 89  DGRTALYMAILQG----LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLS 144
           DG + L++AI+        +++  +    A +N ++    TPLHLA    N+  +   L 
Sbjct: 1   DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVI-TNQPEIAEALL 59

Query: 145 KKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAV 204
                           L ++      ++      S    +  ++ +   +   + LH A 
Sbjct: 60  GAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLAS 119

Query: 205 VKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDL 264
           +   L +VELL+   AD N     N    L  A++  +  +V   L     DV+      
Sbjct: 120 IHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLK-CGADVNRVTYQG 178

Query: 265 NSLLHKACHVGNLQIVQMLVKRKFD 289
            S         + +I Q L +   +
Sbjct: 179 YSPYQLTWGRPSTRIQQQLGQLTLE 203

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.3 bits (157), Expect = 2e-12
 Identities = 25/88 (28%), Positives = 42/88 (47%)

Query: 61  CSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRD 120
             A     +  VE L+S G     ++  +GRTAL++A+      +V+LL+  GA+VN   
Sbjct: 116 HLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVT 175

Query: 121 EKGYTPLHLACYLGNKNIVKFLLSKKAD 148
            +GY+P  L     +  I + L     +
Sbjct: 176 YQGYSPYQLTWGRPSTRIQQQLGQLTLE 203

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.1 bits (146), Expect = 5e-11
 Identities = 31/210 (14%), Positives = 64/210 (30%), Gaps = 8/210 (3%)

Query: 123 GYTPLHLACYLGNKN----IVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEII 178
           G + LHLA     K     +++ +    A +  + ++  TP+    A ++        ++
Sbjct: 2   GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLH--LAVITNQPEIAEALL 59

Query: 179 SMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAI 238
               +              +     +    +                   N    L  A 
Sbjct: 60  GAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLAS 119

Query: 239 ESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFL 298
               + IVE  ++      +    +  + LH A  + N  +V +L+K   D+N       
Sbjct: 120 IHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGY 179

Query: 299 PPMFFAIGMGRKHTHVAEYLLQQDSINVNL 328
            P     G     T + + L Q    N+ +
Sbjct: 180 SPYQLTWGRP--STRIQQQLGQLTLENLQM 207

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.9 bits (143), Expect = 1e-10
 Identities = 37/202 (18%), Positives = 66/202 (32%), Gaps = 19/202 (9%)

Query: 425 RSALQYACKHKN---NIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNY 481
            S L  A  H+     +E+++ +    A +N   N  +Q PL +A+ +   +I + L   
Sbjct: 3   DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQ-NNLQQTPLHLAVITNQPEIAEALLGA 61

Query: 482 GAQIDKENYL-------------KNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRS 528
           G   +  ++                         TT              +         
Sbjct: 62  GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIH 121

Query: 529 NKYDEVKKNIEDGACVNVSSERRG-SALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTA 587
                V+  +  GA VN      G +AL         ++V LLL  GADVN  +  G++ 
Sbjct: 122 GYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSP 181

Query: 588 LHMACRFHSNDNIVRKLLHHGA 609
             +      +  I ++L     
Sbjct: 182 YQLTWG-RPSTRIQQQLGQLTL 202

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (129), Expect = 7e-09
 Identities = 44/197 (22%), Positives = 75/197 (38%), Gaps = 4/197 (2%)

Query: 58  TLLCSAVWDNKIREVEFLLSTGDH---DVNEKLQDGRTALYMAILQGLYKMVTLLIHHGA 114
           + L  A+   +      ++         +N +    +T L++A++    ++   L+  G 
Sbjct: 4   SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGC 63

Query: 115 NVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDT 174
           +   RD +G TPLHLAC  G    V  L            +  T     +          
Sbjct: 64  DPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGY 123

Query: 175 NEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLL 234
             I+ +L+  GA+V  + P    + LH AV  +N  +V LL+KC AD N +      P  
Sbjct: 124 LGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSP-Y 182

Query: 235 FFAIESNSVKIVEAFLN 251
                  S +I +    
Sbjct: 183 QLTWGRPSTRIQQQLGQ 199

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.6 bits (124), Expect = 3e-08
 Identities = 46/239 (19%), Positives = 75/239 (31%), Gaps = 29/239 (12%)

Query: 261 DGDLNSLLHKACHVGNLQIVQMLVK----RKFDINAQNRYFLPPMFFAIGMGRKHTHVAE 316
           DG  +S LH A       +   +++        +N QN     P+  A+   +     A 
Sbjct: 1   DG--DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 58

Query: 317 YLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGD 376
                D    +     P  L      L    V++Q+        I +  +          
Sbjct: 59  LGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNY--------- 109

Query: 377 DMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKN 436
           +  T L  A+ H  L   + L+  GA+VN                   R+AL        
Sbjct: 110 NGHTCLHLASIHGYLGIVELLVSLGADVN------------AQEPCNGRTALHL-AVDLQ 156

Query: 437 NIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE 495
           N ++V LLL  GADVN         P  +       +I ++L     +  +       E
Sbjct: 157 NPDLVSLLLKCGADVNRV-TYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDE 214

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (100), Expect = 3e-05
 Identities = 11/65 (16%), Positives = 21/65 (32%), Gaps = 4/65 (6%)

Query: 553 SALIYVAWKGY----EEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHG 608
           S L             E++  +  + A +NF++    T LH+A   +  +     L    
Sbjct: 4   SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGC 63

Query: 609 AYYDM 613
                
Sbjct: 64  DPELR 68

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (89), Expect = 8e-04
 Identities = 10/46 (21%), Positives = 21/46 (45%), Gaps = 4/46 (8%)

Query: 584 GFTALHMACRFHSND---NIVRKLLHHGAYYDMKDGKTGKTPLKHA 626
           G + LH+A           ++R++    A+ + ++    +TPL  A
Sbjct: 2   GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQN-NLQQTPLHLA 46

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.8 bits (146), Expect = 2e-11
 Identities = 29/150 (19%), Positives = 51/150 (34%), Gaps = 17/150 (11%)

Query: 92  TALYMAILQGLYKMVTLLIHHGANVN------DRDEKGYTPLHLACYLGNKN---IVKFL 142
            +L  A+       +      G ++       +  E   T LHLA    ++    IV FL
Sbjct: 8   HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 67

Query: 143 LSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHF 202
           +    ++  +     T +               E + +L+   A+  E    +  +PL  
Sbjct: 68  VQNSGNLDKQTGKGSTALHYCCLTD------NAECLKLLLRGKAS-IEIANESGETPLDI 120

Query: 203 AVVKKNLSVVELLIKCKAD-TNLIVKVNQE 231
           A   K+    ELL +  +   N  V V  E
Sbjct: 121 AKRLKHEHCEELLTQALSGRFNSHVHVEYE 150

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.4 bits (127), Expect = 5e-09
 Identities = 25/134 (18%), Positives = 47/134 (35%), Gaps = 43/134 (32%)

Query: 57  LTLLCSAVWDNKIREVEFLLSTGDHDVNEKL------QDGRTALYMAIL---QGLYKMVT 107
           L  LC AV    I  +    + G  D+ EK+      +   TAL++A+    +    +V 
Sbjct: 7   LHSLCEAVKTRDIFGLLQAYADG-VDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVD 65

Query: 108 LLIHHGANVNDR---------------------------------DEKGYTPLHLACYLG 134
            L+ +  N++ +                                 +E G TPL +A  L 
Sbjct: 66  FLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLK 125

Query: 135 NKNIVKFLLSKKAD 148
           +++  + L    + 
Sbjct: 126 HEHCEELLTQALSG 139

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.3 bits (111), Expect = 8e-07
 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 11/122 (9%)

Query: 526 VRSNKYDEVKKNIEDGACVNVS------SERRGSALIYVAW---KGYEEIVDLLLDNGAD 576
           V++     + +   DG  +          E   +AL        +    IVD L+ N  +
Sbjct: 14  VKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN 73

Query: 577 VNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIID 636
           ++ ++  G TA    C    N   ++ LL   A  ++ + ++G+TPL  A+  K+    +
Sbjct: 74  LDKQTGKGSTA-LHYCCLTDNAECLKLLLRGKASIEIAN-ESGETPLDIAKRLKHEHCEE 131

Query: 637 LL 638
           LL
Sbjct: 132 LL 133

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.5 bits (109), Expect = 1e-06
 Identities = 22/162 (13%), Positives = 49/162 (30%), Gaps = 36/162 (22%)

Query: 425 RSALQYACK--HKNNIEMVKLLLLHGADVN-----DTSNKPKQKPLAVAIQSGD---FQI 474
            + L   C+     +I  +      G D+         ++P +  L +A++S D     I
Sbjct: 4   AAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHI 63

Query: 475 VKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEV 534
           V  L      +DK+    +        +                          +  + +
Sbjct: 64  VDFLVQNSGNLDKQTGKGSTALHYCCLT--------------------------DNAECL 97

Query: 535 KKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGAD 576
           K  +   A + +++E   + L       +E   +LL    + 
Sbjct: 98  KLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 139

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.1 bits (95), Expect = 9e-05
 Identities = 16/145 (11%), Positives = 40/145 (27%), Gaps = 41/145 (28%)

Query: 373 AEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYAC 432
           A+    +  L  A K  D+         G ++              +      +AL  A 
Sbjct: 1   ADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEK-------IPLANGHEPDETALHLAV 53

Query: 433 K--HKNNIEMVKLLLLHGADV--------------------------------NDTSNKP 458
           +   + ++ +V  L+ +  ++                                 + +N+ 
Sbjct: 54  RSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANES 113

Query: 459 KQKPLAVAIQSGDFQIVKELQNYGA 483
            + PL +A +       + L    +
Sbjct: 114 GETPLDIAKRLKHEHCEELLTQALS 138

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.2 bits (90), Expect = 5e-04
 Identities = 17/118 (14%), Positives = 46/118 (38%), Gaps = 10/118 (8%)

Query: 176 EIISMLIENGANVREKMPFTDF-----SPLHFAVV---KKNLSVVELLIKCKADTNLIVK 227
             +     +G ++ EK+P  +      + LH AV    + +L +V+ L++   + +    
Sbjct: 20  FGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTG 79

Query: 228 VNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVK 285
                L +  +  N+  +        + +++   G   + L  A  + +    ++L +
Sbjct: 80  KGSTALHYCCLTDNAECLKLLLRGKASIEIANESG--ETPLDIAKRLKHEHCEELLTQ 135

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.8 bits (89), Expect = 5e-04
 Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 18/154 (11%)

Query: 456 NKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDL 515
              K   L  A+++ D   + +    G  + ++  L N          T L         
Sbjct: 3   TAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHE----PDETALHL------- 51

Query: 516 LKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGA 575
                  +++V       V   +++   ++  + +  +AL Y       E + LLL   A
Sbjct: 52  ------AVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKA 105

Query: 576 DVNFKSATGFTALHMACRFHSNDNIVRKLLHHGA 609
            +   + +G T L +A R   +++    L    +
Sbjct: 106 SIEIANESGETPLDIAKR-LKHEHCEELLTQALS 138

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.6 bits (86), Expect = 0.001
 Identities = 17/143 (11%), Positives = 43/143 (30%), Gaps = 20/143 (13%)

Query: 268 LHKACHVGNLQIVQMLVKRKFDINAQNRYFL-------PPMFFAIGMGRKHTHVAEYLLQ 320
           L +A    ++  +        D+  +                    + R   H+ ++L  
Sbjct: 10  LCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL-V 68

Query: 321 QDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMIT 380
           Q+S N++    + +              +    +    + +K ++    +I    +   T
Sbjct: 69  QNSGNLDKQTGKGS------------TALHYCCLTDNAECLKLLLRGKASIEIANESGET 116

Query: 381 PLLFAAKHCDLQSAKYLIQKGAN 403
           PL  A +       + L Q  + 
Sbjct: 117 PLDIAKRLKHEHCEELLTQALSG 139

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.4 bits (121), Expect = 3e-08
 Identities = 19/61 (31%), Positives = 33/61 (54%)

Query: 82  DVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKF 141
           DVN K     TAL+ A      ++V LLI +GA+V+ + +   T   ++   GN+++ + 
Sbjct: 92  DVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEI 151

Query: 142 L 142
           L
Sbjct: 152 L 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.1 bits (115), Expect = 2e-07
 Identities = 30/159 (18%), Positives = 58/159 (36%), Gaps = 10/159 (6%)

Query: 125 TPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIEN 184
             L  A   G  + V+ L++  A                 + +   +   +   + ++  
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFTTDWLGT--------SPLHLAAQYGHFSTTEVLLR 55

Query: 185 GANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVK 244
               R+     D +PLH A  + + ++VE+L+K  AD N    +     L +A E N  +
Sbjct: 56  AGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTA-LHWATEHNHQE 114

Query: 245 IVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQML 283
           +VE        DV        +    +   GN  + ++L
Sbjct: 115 VVELL-IKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.2 bits (110), Expect = 8e-07
 Identities = 29/150 (19%), Positives = 58/150 (38%), Gaps = 7/150 (4%)

Query: 461 KPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNL 520
           K L  A ++G    V+ L   GA    +    +       +      E      + +   
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63

Query: 521 DFLKNVRSNKYDE------VKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNG 574
             +     +          V+  ++ GA VN     + +AL +     ++E+V+LL+  G
Sbjct: 64  TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123

Query: 575 ADVNFKSATGFTALHMACRFHSNDNIVRKL 604
           ADV+ +S    TA  ++   + N+++   L
Sbjct: 124 ADVHTQSKFCKTAFDISID-NGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.8 bits (109), Expect = 9e-07
 Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 9/159 (5%)

Query: 89  DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKAD 148
           D    L  A   G    V +L+ +GA     D  G +PLHLA   G+ +  + LL     
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS 59

Query: 149 VRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKN 208
             A+  +  TP           S     I+ +L+++GA+          + LH+A    +
Sbjct: 60  RDARTKVDRTP------LHMAASEGHANIVEVLLKHGAD-VNAKDMLKMTALHWATEHNH 112

Query: 209 LSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVE 247
             VVELLIK  AD +   K  +      +I++ +  + E
Sbjct: 113 QEVVELLIKYGADVHTQSKFCKTA-FDISIDNGNEDLAE 150

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.7 bits (101), Expect = 1e-05
 Identities = 27/182 (14%), Positives = 57/182 (31%), Gaps = 30/182 (16%)

Query: 263 DLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQD 322
           DL   L +A   G    V++L+              P    A       T V        
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR 60

Query: 323 SINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPL 382
                              +  D   +     +    I++ ++    ++NA+    +T L
Sbjct: 61  DA----------------RTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTAL 104

Query: 383 LFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVK 442
            +A +H   +  + LI+ GA+V+                   ++A   +  +  N ++ +
Sbjct: 105 HWATEHNHQEVVELLIKYGADVHTQ-------------SKFCKTAFDISIDN-GNEDLAE 150

Query: 443 LL 444
           +L
Sbjct: 151 IL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.3 bits (87), Expect = 0.001
 Identities = 21/147 (14%), Positives = 44/147 (29%), Gaps = 4/147 (2%)

Query: 552 GSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYY 611
           G  L+  A  G ++ V +L+ NGA        G + LH+A ++         L    +  
Sbjct: 3   GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD 61

Query: 612 DMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNSAKQLGL 671
                      +  +E   N   + L H  D     +      +           +   L
Sbjct: 62  ARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVE---L 118

Query: 672 VHVFEIMKVVKNYAGETLIGVARKMNY 698
           +  +      ++   +T   ++     
Sbjct: 119 LIKYGADVHTQSKFCKTAFDISIDNGN 145

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (119), Expect = 5e-08
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 81  HDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVK 140
            DVN     G   +++A+ +G   +V+ L    ++++ RD +G TPL LA   G +++V 
Sbjct: 92  ADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVD 150

Query: 141 FLLS 144
            L  
Sbjct: 151 ILQG 154

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (93), Expect = 1e-04
 Identities = 30/153 (19%), Positives = 49/153 (32%), Gaps = 9/153 (5%)

Query: 462 PLAVAIQSGDFQIVKEL-QNYGAQIDKEN------YLKNKEAARIAHSTTELEERKKIND 514
            L+ A   GD Q V+ L        D  N             +         +       
Sbjct: 5   RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQ 64

Query: 515 LLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNG 574
                       R+   D +K  +E GA VNV        +     +G+  +V  L    
Sbjct: 65  DTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE- 123

Query: 575 ADVNFKSATGFTALHMACRFHSNDNIVRKLLHH 607
           +D++ + A G T L +A +     ++V  L  H
Sbjct: 124 SDLHRRDARGLTPLELALQ-RGAQDLVDILQGH 155

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (92), Expect = 2e-04
 Identities = 15/151 (9%), Positives = 39/151 (25%), Gaps = 6/151 (3%)

Query: 427 ALQYACKHKNNIEMVKLLLL-HGADVNDTSNK----PKQKPLAVAIQSGDFQIVKELQNY 481
            L  A     +++ V+ LL       +  +       +         + +        N 
Sbjct: 5   RLSGAAAR-GDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNV 63

Query: 482 GAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDG 541
                            +      +E    +N         +       +  V   +   
Sbjct: 64  QDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE 123

Query: 542 ACVNVSSERRGSALIYVAWKGYEEIVDLLLD 572
           + ++    R  + L     +G +++VD+L  
Sbjct: 124 SDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (85), Expect = 0.002
 Identities = 16/164 (9%), Positives = 40/164 (24%), Gaps = 12/164 (7%)

Query: 122 KGYTPLHLACYLGNKNIVKFLLSKK-ADVRAKCSMMVTPILAVSANMSEDSTDTNEIISM 180
           +    L  A   G+   V+ LL ++     A      T +  +    +  + +  +  + 
Sbjct: 1   RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGAS 60

Query: 181 LIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIES 240
                 +    +     +     +                    +   +    L   +  
Sbjct: 61  PNVQDTSGTSPVHDAARTGFLDTL-----------KVLVEHGADVNVPDGTGALPIHLAV 109

Query: 241 NSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLV 284
                      +   D+   D    + L  A   G   +V +L 
Sbjct: 110 QEGHTAVVSFLAAESDLHRRDARGLTPLELALQRGAQDLVDILQ 153

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (84), Expect = 0.002
 Identities = 16/149 (10%), Positives = 39/149 (26%), Gaps = 17/149 (11%)

Query: 268 LHKACHVGNLQIVQMLVKRK-FDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINV 326
           L  A   G++Q V+ L+ R+    +A NR+    +   +                 ++  
Sbjct: 6   LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQD 65

Query: 327 NLPIKRPNLLLDTVMSLKDPKVMSQ----------------TQIKRLDQIIKRIIDRTEN 370
                  +    T        ++                    ++     +   +    +
Sbjct: 66  TSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAESD 125

Query: 371 INAEGDDMITPLLFAAKHCDLQSAKYLIQ 399
           ++      +TPL  A +         L  
Sbjct: 126 LHRRDARGLTPLELALQRGAQDLVDILQG 154

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (82), Expect = 0.004
 Identities = 21/157 (13%), Positives = 44/157 (28%), Gaps = 9/157 (5%)

Query: 60  LCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDR 119
           L  A     ++EV  LL       +   + G+TAL + +       + LL    +     
Sbjct: 6   LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQD 65

Query: 120 DEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIIS 179
                     A       +   +           +  +   LAV    +   +       
Sbjct: 66  TSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAESD 125

Query: 180 MLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLI 216
           +   +             +PL  A+ +    +V++L 
Sbjct: 126 LHRRDARG---------LTPLELALQRGAQDLVDILQ 153

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.3 bits (118), Expect = 6e-08
 Identities = 20/157 (12%), Positives = 44/157 (28%), Gaps = 7/157 (4%)

Query: 424 FRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGA 483
           + + L  A     ++E +  LL +  +VN  +   +     + + + +      L+    
Sbjct: 1   WGNELASAAAR-GDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANP 59

Query: 484 Q------IDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKN 537
                      +            +  E +    I D        L     +        
Sbjct: 60  DLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLV 119

Query: 538 IEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNG 574
               + V   + +  +A       G  E+V L+  NG
Sbjct: 120 KHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (113), Expect = 4e-07
 Identities = 25/147 (17%), Positives = 46/147 (31%), Gaps = 3/147 (2%)

Query: 552 GSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYY 611
           G+ L   A +G  E +  LL N  +VN ++  G             +  + + L      
Sbjct: 2   GNELASAAARGDLEQLTSLLQNNVNVNAQNGFGR---TALQVMKLGNPEIARRLLLRGAN 58

Query: 612 DMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNSAKQLGL 671
                +TG   +  A      D +  L           N  +  ++   +  +      L
Sbjct: 59  PDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFL 118

Query: 672 VHVFEIMKVVKNYAGETLIGVARKMNY 698
           V         +N+ G+T   +AR    
Sbjct: 119 VKHTASNVGHRNHKGDTACDLARLYGR 145

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (112), Expect = 4e-07
 Identities = 14/154 (9%), Positives = 36/154 (23%), Gaps = 18/154 (11%)

Query: 266 SLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSIN 325
           + L  A   G+L+ +  L++   ++NAQN +    +        +             + 
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62

Query: 326 VNLPIKRPNLLLDTVMSLKDPKVMS------------------QTQIKRLDQIIKRIIDR 367
                   +             ++                     +   L  +   +   
Sbjct: 63  DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122

Query: 368 TENINAEGDDMITPLLFAAKHCDLQSAKYLIQKG 401
             N+        T    A  +   +    +   G
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (106), Expect = 3e-06
 Identities = 16/162 (9%), Positives = 38/162 (23%), Gaps = 9/162 (5%)

Query: 125 TPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIEN 184
             L  A   G+   +  LL    +V A+               +                
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFG---------RTALQVMKLGNPEIARRLL 53

Query: 185 GANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVK 244
                  +       +     +         +        I        L  A +   ++
Sbjct: 54  LRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLR 113

Query: 245 IVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKR 286
           +VE  +     +V   +   ++    A   G  ++V ++   
Sbjct: 114 VVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 155

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (103), Expect = 8e-06
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 111 HHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSK 145
           H  +NV  R+ KG T   LA   G   +V  + + 
Sbjct: 121 HTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 155

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (101), Expect = 1e-05
 Identities = 20/152 (13%), Positives = 38/152 (25%), Gaps = 26/152 (17%)

Query: 92  TALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRA 151
             L  A  +G  + +T L+ +  NVN ++  G T L +      +   + LL        
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62

Query: 152 KCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDF-------------- 197
             +       A  A   +      E  + +          +                   
Sbjct: 63  DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122

Query: 198 ------------SPLHFAVVKKNLSVVELLIK 217
                       +    A +     VV L+  
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQA 154

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (87), Expect = 0.001
 Identities = 19/154 (12%), Positives = 43/154 (27%), Gaps = 8/154 (5%)

Query: 462 PLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLD 521
            LA A   GD + +  L      ++ +N         +     E+  R  +        D
Sbjct: 4   ELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLKD 63

Query: 522 FLKNVRSNKYDEVKKNIEDGACVN-------VSSERRGSALIYVAWKGYEEIVDLLLDNG 574
                  +              +          +E      +         +  L+    
Sbjct: 64  RTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTA 123

Query: 575 ADVNFKSATGFTALHMACRFHSNDNIVRKLLHHG 608
           ++V  ++  G TA  +A   +  + +V  +  +G
Sbjct: 124 SNVGHRNHKGDTACDLARL-YGRNEVVSLMQANG 156

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.7 bits (117), Expect = 7e-08
 Identities = 15/127 (11%), Positives = 35/127 (27%), Gaps = 21/127 (16%)

Query: 380 TPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFR-------------- 425
             LL ++   +    + +I +  + +L   +                             
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 426 -----SALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKP--LAVAIQSGDFQIVKEL 478
                    +     NN+++ K L+  GA V   +    Q        ++ G  Q  + L
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122

Query: 479 QNYGAQI 485
                ++
Sbjct: 123 YGVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (106), Expect = 2e-06
 Identities = 18/128 (14%), Positives = 32/128 (25%), Gaps = 35/128 (27%)

Query: 57  LTLLCSAVWDNKIREVEFLLSTG--------------------------------DHDVN 84
           L LL  +  + +   V+ ++                                     +VN
Sbjct: 2   LALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVN 61

Query: 85  EKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGY---TPLHLACYLGNKNIVKF 141
               DG T L+ A      ++   L+  GA V                    G     +F
Sbjct: 62  AADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQF 121

Query: 142 LLSKKADV 149
           L   +  +
Sbjct: 122 LYGVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (98), Expect = 3e-05
 Identities = 23/131 (17%), Positives = 48/131 (36%), Gaps = 8/131 (6%)

Query: 92  TALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRA 151
             L  + L+G + +V  +I+   + +  +++G T LH A   G+  IVKF       V+ 
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKF------LVQF 56

Query: 152 KCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKN--L 209
             ++        +      S +  ++   L+E+GA V         +        +    
Sbjct: 57  GVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYT 116

Query: 210 SVVELLIKCKA 220
              + L   + 
Sbjct: 117 QCSQFLYGVQE 127

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (95), Expect = 7e-05
 Identities = 14/142 (9%), Positives = 36/142 (25%), Gaps = 18/142 (12%)

Query: 266 SLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSIN 325
           +LL  +   G   +VQ ++    D +  N   +  +  A+  G             +   
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 326 VNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMI---TPL 382
                                  +         Q+ K +++    + A     +      
Sbjct: 63  ---------------ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADK 107

Query: 383 LFAAKHCDLQSAKYLIQKGANV 404
               +    Q +++L      +
Sbjct: 108 CEEMEEGYTQCSQFLYGVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (91), Expect = 2e-04
 Identities = 16/120 (13%), Positives = 32/120 (26%), Gaps = 34/120 (28%)

Query: 553 SALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDN------------- 599
           + L+  + +G  ++V  ++    D +  +  G TALH A      +              
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 600 -------------------IVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKN--RDIIDLL 638
                              + + L+  GA          +T     E  +         L
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (86), Expect = 0.001
 Identities = 16/129 (12%), Positives = 33/129 (25%), Gaps = 13/129 (10%)

Query: 462 PLAV---AIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKL 518
           PLA+   +   G+F +V+ +          N            +      +  +   + +
Sbjct: 1   PLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNV 60

Query: 519 NLDFLKNVRSNKYDEVKKN-------IEDGACVNVSSERRG---SALIYVAWKGYEEIVD 568
           N                 N       +E GA V   +       +       +GY +   
Sbjct: 61  NAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQ 120

Query: 569 LLLDNGADV 577
            L      +
Sbjct: 121 FLYGVQEKM 129

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (91), Expect = 1e-04
 Identities = 11/34 (32%), Positives = 21/34 (61%)

Query: 111 HHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLS 144
             GA ++ RD  G  P+ LA  LG++++ ++L +
Sbjct: 90  RAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA 123

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (90), Expect = 2e-04
 Identities = 16/122 (13%), Positives = 25/122 (20%), Gaps = 26/122 (21%)

Query: 121 EKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISM 180
           E     L  A   G    V+ LL   A+  A  S    PI  +    +  +       + 
Sbjct: 1   EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAE 60

Query: 181 LIENGANVREKMPFTDF--------------------------SPLHFAVVKKNLSVVEL 214
                     +                                 P+  A    +  V   
Sbjct: 61  PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARY 120

Query: 215 LI 216
           L 
Sbjct: 121 LR 122

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (83), Expect = 0.002
 Identities = 15/133 (11%), Positives = 37/133 (27%), Gaps = 15/133 (11%)

Query: 267 LLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINV 326
            L  A   G ++ V+ L++   + NA N Y   P+   +    +   +      + +   
Sbjct: 6   WLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCA- 64

Query: 327 NLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAA 386
                               + +     +     +  +      ++        P+  A 
Sbjct: 65  --------------DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAE 110

Query: 387 KHCDLQSAKYLIQ 399
           +      A+YL  
Sbjct: 111 ELGHRDVARYLRA 123

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (80), Expect = 0.004
 Identities = 20/121 (16%), Positives = 33/121 (27%), Gaps = 31/121 (25%)

Query: 549 ERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHG 608
           E     L   A +G  E V  LL+ GA+ N  ++ G   + +     +    +  L    
Sbjct: 1   EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAE 60

Query: 609 AYYDMKD-------------------------------GKTGKTPLKHAEAGKNRDIIDL 637
                                                    G+ P+  AE   +RD+   
Sbjct: 61  PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARY 120

Query: 638 L 638
           L
Sbjct: 121 L 121

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	710
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	100.0
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	100.0
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	100.0
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	100.0
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	100.0
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	100.0
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	100.0
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.98
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.96
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.96
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.96
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.95
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.95
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.94
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.94
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.93
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.93
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.93
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.92
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.92
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.92
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.91
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.9
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.9
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.9
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.9
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.89
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.89
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.88
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.88

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-51  Score=421.39  Aligned_cols=381  Identities=28%  Similarity=0.356  Sum_probs=245.1

Q ss_pred             hHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHH
Q psy15068         58 TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKN  137 (710)
Q Consensus        58 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~  137 (710)
                      ||||.||..|+.++|++|+++|+ +++.+|..|+||||+|++.|+.+++++|+++|++++.++..|.||||+|+..|+.+
T Consensus         2 TpL~~Aa~~g~~~~v~~Ll~~g~-~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~~~~g~t~L~~A~~~g~~~   80 (408)
T d1n11a_           2 TPLHVASFMGHLPIVKNLLQRGA-SPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTN   80 (408)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTTC-CSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHH
T ss_pred             ChHHHHHHCcCHHHHHHHHHCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHH
Confidence            77777777777777777777777 77777777777777777777777777777777777777777777777777777777


Q ss_pred             HHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHh
Q psy15068        138 IVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIK  217 (710)
Q Consensus       138 iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~  217 (710)
                      ++++|+..+.+.........                                        +++..+...+..........
T Consensus        81 ~~~~Ll~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~~~~~~~~~~~~  120 (408)
T d1n11a_          81 MVKLLLENNANPNLATTAGH----------------------------------------TPLHIAAREGHVETVLALLE  120 (408)
T ss_dssp             HHHHHHHHTCCTTCCCTTCC----------------------------------------CHHHHHHHHTCHHHHHHHHH
T ss_pred             HHHHHHHhhhcccccccccc----------------------------------------chhhhhhhhccccccccccc
Confidence            77777776655443333333                                        34444444433333333333


Q ss_pred             CCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCC
Q psy15068        218 CKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYF  297 (710)
Q Consensus       218 ~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~  297 (710)
                      .+..                                   ....+..+.++++.|+..++.+++++|+++|++++..+..+
T Consensus       121 ~~~~-----------------------------------~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~  165 (408)
T d1n11a_         121 KEAS-----------------------------------QACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNG  165 (408)
T ss_dssp             TTCC-----------------------------------SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSC
T ss_pred             cccc-----------------------------------ccccccccchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCcC
Confidence            3322                                   23333444455555555555555555555555555555555


Q ss_pred             CChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCcchhhhhhccCCcccccHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q psy15068        298 LPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDD  377 (710)
Q Consensus       298 ~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~  377 (710)
                      .+||++|+..++.                                                +++++|+++|.+++..+..
T Consensus       166 ~~~L~~A~~~~~~------------------------------------------------~~~~~Ll~~g~~~~~~~~~  197 (408)
T d1n11a_         166 LTPLHVAVHHNNL------------------------------------------------DIVKLLLPRGGSPHSPAWN  197 (408)
T ss_dssp             CCHHHHHHHTTCH------------------------------------------------HHHHHHGGGTCCSCCCCTT
T ss_pred             chHHHHHHHcCCH------------------------------------------------HHHHHHHhcCCcccccCCC
Confidence            5555555555544                                                3333333345555555555


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCCC
Q psy15068        378 MITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNK  457 (710)
Q Consensus       378 ~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~~  457 (710)
                      |.||++.+......+....++..+......+..             +.||++.|+.. +..++++++++.+...+.. +.
T Consensus       198 ~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~-------------~~t~l~~a~~~-~~~~~~~~~~~~~~~~~~~-~~  262 (408)
T d1n11a_         198 GYTPLHIAAKQNQVEVARSLLQYGGSANAESVQ-------------GVTPLHLAAQE-GHAEMVALLLSKQANGNLG-NK  262 (408)
T ss_dssp             CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-------------CCCHHHHHHHT-TCHHHHHHHHTTTCCTTCC-CT
T ss_pred             CCCcchhhhccchhhhhhhhhhccccccccCCC-------------CCCHHHHHHHh-CcHhHhhhhhccccccccc-cC
Confidence            666666666666666666666666555554444             66777777766 6777777777777666665 66


Q ss_pred             CCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHH
Q psy15068        458 PKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKN  537 (710)
Q Consensus       458 ~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  537 (710)
                      .|.||++.|+..++.+++++|+++|++++..                                                 
T Consensus       263 ~g~~~l~~a~~~~~~~i~~~Ll~~g~~~~~~-------------------------------------------------  293 (408)
T d1n11a_         263 SGLTPLHLVAQEGHVPVADVLIKHGVMVDAT-------------------------------------------------  293 (408)
T ss_dssp             TCCCHHHHHHHHTCHHHHHHHHHHTCCTTCC-------------------------------------------------
T ss_pred             CCCChhhhhhhcCcHHHHHHHHHCCCccccc-------------------------------------------------
Confidence            6777777777777777777777777665433                                                 


Q ss_pred             HhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCC
Q psy15068        538 IEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGK  617 (710)
Q Consensus       538 l~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~  617 (710)
                                +..+.||||.++..++.+++++++++|++++.+|.+|+||||+|++. |+.++|++|+++|++++.++ .
T Consensus       294 ----------~~~~~t~L~~~~~~~~~~~~~~ll~~g~~in~~d~~G~T~Lh~A~~~-g~~~iv~~Ll~~GAd~n~~d-~  361 (408)
T d1n11a_         294 ----------TRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQ-GHTDIVTLLLKNGASPNEVS-S  361 (408)
T ss_dssp             ----------CSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHTTCCSCCCC-S
T ss_pred             ----------cccccccchhhcccCcceeeeeeccccccccccCCCCCCHHHHHHHc-CCHHHHHHHHHCCCCCCCCC-C
Confidence                      23445667777777777777777777777777777777777777776 77777777777777777766 6


Q ss_pred             CCCCHhHHHHhCCChhHHHHH
Q psy15068        618 TGKTPLKHAEAGKNRDIIDLL  638 (710)
Q Consensus       618 ~g~t~L~~A~~~~~~~~v~~L  638 (710)
                      +|+||||+|++.|+.++|++|
T Consensus       362 ~G~t~L~~A~~~~~~~iv~~L  382 (408)
T d1n11a_         362 DGTTPLAIAKRLGYISVTDVL  382 (408)
T ss_dssp             SSCCHHHHHHHTTCHHHHHHH
T ss_pred             CCCCHHHHHHHcCCHHHHHHH
Confidence            777777777777777766655

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-50  Score=412.87  Aligned_cols=384  Identities=25%  Similarity=0.284  Sum_probs=363.6

Q ss_pred             ccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcH
Q psy15068         24 HHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLY  103 (710)
Q Consensus        24 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~  103 (710)
                      .||||.||..|+.++|++|+++|+++|..|..|.||||+|+..|+.++|++|+++|+ +++.++..|+||||+|+..|+.
T Consensus         1 ~TpL~~Aa~~g~~~~v~~Ll~~g~~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga-di~~~~~~g~t~L~~A~~~g~~   79 (408)
T d1n11a_           1 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKA-KVNAKAKDDQTPLHCAARIGHT   79 (408)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTC-CSSCCCTTSCCHHHHHHHHTCH
T ss_pred             CChHHHHHHCcCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCcC-CCCCCCCCCCCHHHHHHHcCCH
Confidence            489999999999999999999999999999999999999999999999999999999 9999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHH
Q psy15068        104 KMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIE  183 (710)
Q Consensus       104 ~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~  183 (710)
                      +++++|+..+.+.........+++..+...+...........+...+..+..+.++++.++..+      +.+++++|++
T Consensus        80 ~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~------~~~~v~~ll~  153 (408)
T d1n11a_          80 NMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYG------KVRVAELLLE  153 (408)
T ss_dssp             HHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTT------CHHHHHHHHH
T ss_pred             HHHHHHHHhhhccccccccccchhhhhhhhcccccccccccccccccccccccchHHHHHHHcC------CHHHHHHHHH
Confidence            9999999999888888888999999999999999999999999999999999999999999999      9999999999


Q ss_pred             cCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCC
Q psy15068        184 NGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGD  263 (710)
Q Consensus       184 ~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~  263 (710)
                      +|.+++..+. .+.+||+.|+..|+.+++++|+++|++++..+..+.++ ++.+....+.+... .+...+......+..
T Consensus       154 ~~~~~~~~~~-~~~~~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~-l~~~~~~~~~~~~~-~l~~~~~~~~~~~~~  230 (408)
T d1n11a_         154 RDAHPNAAGK-NGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTP-LHIAAKQNQVEVAR-SLLQYGGSANAESVQ  230 (408)
T ss_dssp             TTCCTTCCCS-SCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCH-HHHHHHTTCHHHHH-HHHHTTCCTTCCCTT
T ss_pred             cCCCCCcCCC-cCchHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCc-chhhhccchhhhhh-hhhhccccccccCCC
Confidence            9999998887 89999999999999999999999999999999888888 99999999999999 676777777788888


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCcchhhhhhcc
Q psy15068        264 LNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSL  343 (710)
Q Consensus       264 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~  343 (710)
                      +.|||++|+..+..++++++++.+...+..+..|.||++.++..++.                                 
T Consensus       231 ~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~---------------------------------  277 (408)
T d1n11a_         231 GVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHV---------------------------------  277 (408)
T ss_dssp             CCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH---------------------------------
T ss_pred             CCCHHHHHHHhCcHhHhhhhhccccccccccCCCCChhhhhhhcCcH---------------------------------
Confidence            99999999999999999999999999999999999999999999987                                 


Q ss_pred             CCcccccHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccc
Q psy15068        344 KDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFC  423 (710)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~  423 (710)
                                     +++++|+++|++++..+..+.|||+.++..++.++++++++.|++++..+..             
T Consensus       278 ---------------~i~~~Ll~~g~~~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~g~~in~~d~~-------------  329 (408)
T d1n11a_         278 ---------------PVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKL-------------  329 (408)
T ss_dssp             ---------------HHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTT-------------
T ss_pred             ---------------HHHHHHHHCCCccccccccccccchhhcccCcceeeeeeccccccccccCCC-------------
Confidence                           6666666789999999999999999999999999999999999999988887             


Q ss_pred             cCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHH
Q psy15068        424 FRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQN  480 (710)
Q Consensus       424 ~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~  480 (710)
                      |.||||.|+.. ++.+++++|+++|++++.. +..|.||||+|++.|+.++|++|..
T Consensus       330 G~T~Lh~A~~~-g~~~iv~~Ll~~GAd~n~~-d~~G~t~L~~A~~~~~~~iv~~L~~  384 (408)
T d1n11a_         330 GYSPLHQAAQQ-GHTDIVTLLLKNGASPNEV-SSDGTTPLAIAKRLGYISVTDVLKV  384 (408)
T ss_dssp             SCCHHHHHHHT-TCHHHHHHHHHTTCCSCCC-CSSSCCHHHHHHHTTCHHHHHHHHH
T ss_pred             CCCHHHHHHHc-CCHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHH
Confidence            99999999999 9999999999999999988 9999999999999999999987743

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.2e-35  Score=277.25  Aligned_cols=247  Identities=19%  Similarity=0.149  Sum_probs=188.5

Q ss_pred             CCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCCC
Q psy15068        372 NAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADV  451 (710)
Q Consensus       372 ~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~  451 (710)
                      +..+.+|.||||+|+..|+.+++++|+++|+++...+          ..+..|.||||+|+.. ++.+++++|+++|+++
T Consensus         3 ~~i~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~----------~~~~~g~TpL~~A~~~-g~~~iv~~Ll~~ga~i   71 (255)
T d1oy3d_           3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLD----------LQNDLGQTALHLAAIL-GEASTVEKLYAAGAGV   71 (255)
T ss_dssp             CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGG----------CCCTTSCCHHHHHHHH-TCHHHHHHHHHTTCCS
T ss_pred             ccCCcCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc----------CcCCCCCCccchHHhh-cccccccccccccccc
Confidence            4567899999999999999999999999998854322          1233399999999999 9999999999999999


Q ss_pred             CCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCch
Q psy15068        452 NDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKY  531 (710)
Q Consensus       452 ~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  531 (710)
                      +.. +..|.|||++|+..++.+++++|++.+.......  ....... .....  ....       ..............
T Consensus        72 ~~~-d~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~--~~~~~~~-~~~~~--~~~~-------~~~~~~~~~~~~~~  138 (255)
T d1oy3d_          72 LVA-ERGGHTALHLACRVRAHTCACVLLQPRPSHPRDA--SDTYLTQ-SQDCT--PDTS-------HAPAAVDSQPNPEN  138 (255)
T ss_dssp             SCC-CTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC------------------------------------------
T ss_pred             ccc-ccccchhhhhhhccCchHHHHHHHhhccchhccc--chhhhhH-Hhhhc--ccch-------HHHHHHHhhcchhH
Confidence            988 9999999999999999999999998876543211  0000000 00000  0000       00000000111122


Q ss_pred             HHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccc-CCCCCcHHHHHHhcCCchHHHHHHHHcCCC
Q psy15068        532 DEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFK-SATGFTALHMACRFHSNDNIVRKLLHHGAY  610 (710)
Q Consensus       532 ~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~  610 (710)
                      .........+.+++.++.+|.||||+|+..++.+++++|++++++++.. +..|.||||+|+.. ++.+++++|+++|++
T Consensus       139 ~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~-~~~~~v~~Ll~~gad  217 (255)
T d1oy3d_         139 EEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEA-QAASVLELLLKAGAD  217 (255)
T ss_dssp             -----CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT-TCHHHHHHHHHTTCC
T ss_pred             HHHHHhhhcCcccccccccCcccccccccccccccccchhcccccccccccccccccccccccc-cHHHHHHHHHHCCCC
Confidence            2233334456778889999999999999999999999999999998864 67899999999999 999999999999999


Q ss_pred             CCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhc
Q psy15068        611 YDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNL  644 (710)
Q Consensus       611 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~  644 (710)
                      ++.++ ..|+||||+|+..++.+++++|+++||+
T Consensus       218 in~~d-~~g~t~L~~A~~~~~~~i~~~Ll~~Ga~  250 (255)
T d1oy3d_         218 PTARM-YGGRTPLGSALLRPNPILARLLRAHGAP  250 (255)
T ss_dssp             TTCCC-TTSCCHHHHHHTSSCHHHHHHHHHTTCC
T ss_pred             CCCCC-CCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence            99999 9999999999999999999999999996

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-34  Score=265.06  Aligned_cols=218  Identities=30%  Similarity=0.413  Sum_probs=108.8

Q ss_pred             hhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCH
Q psy15068         57 LTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNK  136 (710)
Q Consensus        57 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~  136 (710)
                      .+.|+.++..|+++.|+.+++.++..++.+|..|+||||+||..|+.+++++|++.+......+..+.++++.|+..|+.
T Consensus         4 ~~~~~~~a~~G~~~~v~~~l~~~~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
T d1uoha_           4 NLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRD   83 (223)
T ss_dssp             SSHHHHHHHTTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTCCCHHHHHHHHTCH
T ss_pred             HHHHHHHHHhCCHHHHHHHHHhCCCcCcCcCCCCCCHHHHHHHhhhhccccccccccccccccccccccccccccccccc
Confidence            35555666666666665555444335556666666666666666666666666666555555555556666666666666


Q ss_pred             HHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHH
Q psy15068        137 NIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLI  216 (710)
Q Consensus       137 ~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll  216 (710)
                      +++++|+++|++++..+..|.|||++|+..+      +.+++++|+++|++++..+. .+.|||+.|+..++.+++++|.
T Consensus        84 ~i~~~Ll~~~~d~~~~d~~g~tpL~~A~~~~------~~e~~~~Ll~~g~d~~~~~~-~~~t~L~~a~~~~~~~~~~~L~  156 (223)
T d1uoha_          84 EIVKALLGKGAQVNAVNQNGCTPLHYAASKN------RHEIAVMLLEGGANPDAKDH-YEATAMHRAAAKGNLKMIHILL  156 (223)
T ss_dssp             HHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT------CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHH
T ss_pred             chhHHHhccCceeEeeCCCCCchhhHHHHcC------CHHHHHHHHHCCCCCCCcCC-CCCccchhhhhcCCcchhhhhc
Confidence            6666666666655555555555555554444      44444444444444444433 4444444444444444444444


Q ss_pred             hCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy15068        217 KCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLV  284 (710)
Q Consensus       217 ~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll  284 (710)
                      +.+.+++..+..+.+| |+.|+..|+.++++ +|++.|++++..|..|+||||+| ..|+.+++++|+
T Consensus       157 ~~~~~i~~~d~~g~Tp-L~~Aa~~g~~~~v~-~LL~~Gad~~~~d~~g~tpl~~A-~~~~~~i~~~Ll  221 (223)
T d1uoha_         157 YYKASTNIQDTEGNTP-LHLACDEERVEEAK-LLVSQGASIYIENKEEKTPLQVA-KGGLGLILKRMV  221 (223)
T ss_dssp             HTTCCSCCCCTTCCCH-HHHHHHTTCHHHHH-HHHHTTCCSCCCCTTSCCHHHHC-CTTHHHHHHHHH
T ss_pred             cccceeeeccCCCCce-eccccccCcHHHHH-HHHHCCCCCCCCCCCCCCHHHHH-HCCCHHHHhccc
Confidence            4444444333333333 33333333333333 22233333333333344444333 223333333333

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-34  Score=262.21  Aligned_cols=217  Identities=24%  Similarity=0.244  Sum_probs=205.1

Q ss_pred             ccchhhhhhcChhhHHHHHHh-hhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCc
Q psy15068         24 HHHLFSEIMFSEEDAFGYFLQ-GIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGL  102 (710)
Q Consensus        24 ~~~l~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~  102 (710)
                      ++.|..++..|+.+.++.+++ .+..++.+|..|+||||+|+..|+.+++++|++.+. .....+..+.++++.|+..|+
T Consensus         4 ~~~~~~~a~~G~~~~v~~~l~~~~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~   82 (223)
T d1uoha_           4 NLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGV-PVNDKDDAGWSPLHIAASAGR   82 (223)
T ss_dssp             SSHHHHHHHTTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTC-CSCCCCTTCCCHHHHHHHHTC
T ss_pred             HHHHHHHHHhCCHHHHHHHHHhCCCcCcCcCCCCCCHHHHHHHhhhhccccccccccc-ccccccccccccccccccccc
Confidence            467888999999999977775 667899999999999999999999999999999998 888888899999999999999


Q ss_pred             HHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHH
Q psy15068        103 YKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLI  182 (710)
Q Consensus       103 ~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll  182 (710)
                      .+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.++..+.|||++++..+      ..+++++|.
T Consensus        83 ~~i~~~Ll~~~~d~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~------~~~~~~~L~  156 (223)
T d1uoha_          83 DEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKG------NLKMIHILL  156 (223)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHH
T ss_pred             cchhHHHhccCceeEeeCCCCCchhhHHHHcCCHHHHHHHHHCCCCCCCcCCCCCccchhhhhcC------Ccchhhhhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999      999999999


Q ss_pred             HcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHH
Q psy15068        183 ENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFL  250 (710)
Q Consensus       183 ~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL  250 (710)
                      +.+.+++..+. .|.|||+.|+..|+.+++++|++.|++++..+..+++| |++| ..|+.++++.+|
T Consensus       157 ~~~~~i~~~d~-~g~TpL~~Aa~~g~~~~v~~LL~~Gad~~~~d~~g~tp-l~~A-~~~~~~i~~~Ll  221 (223)
T d1uoha_         157 YYKASTNIQDT-EGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTP-LQVA-KGGLGLILKRMV  221 (223)
T ss_dssp             HTTCCSCCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCH-HHHC-CTTHHHHHHHHH
T ss_pred             cccceeeeccC-CCCceeccccccCcHHHHHHHHHCCCCCCCCCCCCCCH-HHHH-HCCCHHHHhccc
Confidence            99999999988 99999999999999999999999999999999999999 9988 579999999444

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.2e-34  Score=271.08  Aligned_cols=234  Identities=23%  Similarity=0.206  Sum_probs=179.1

Q ss_pred             CCccccchhHHHHHHhcCCHHHHHHHHhcCCCC---CccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCH
Q psy15068         50 SSAKSVELTLLCSAVWDNKIREVEFLLSTGDHD---VNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTP  126 (710)
Q Consensus        50 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~---~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~  126 (710)
                      +..+.+|.||||.||+.|+.+++++|+++|+ +   ++.++..|+||||+|+..|+.+++++|+++|++++..|..|.||
T Consensus         3 ~~i~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a-~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~~d~~g~tp   81 (255)
T d1oy3d_           3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSA-GHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTA   81 (255)
T ss_dssp             CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHT-TSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCH
T ss_pred             ccCCcCCCCHHHHHHHcCCHHHHHHHHHcCC-CcccccCcCCCCCCccchHHhhcccccccccccccccccccccccchh
Confidence            4567889999999999999999999999987 5   66788899999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCHHHHHHHHhCCCCccccccCC----------CchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCC
Q psy15068        127 LHLACYLGNKNIVKFLLSKKADVRAKCSMM----------VTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTD  196 (710)
Q Consensus       127 L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~----------~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~  196 (710)
                      ||+|+..++.+++++|++.+..........          .+...........  .............+.+++.++. .|
T Consensus        82 L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~in~~d~-~g  158 (255)
T d1oy3d_          82 LHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQP--NPENEEEPRDEDWRLQLEAENY-DG  158 (255)
T ss_dssp             HHHHTTTTCHHHHHHHSSSCCSSCCCC-------------------------------------CCCGGGGTTCCCT-TS
T ss_pred             hhhhhccCchHHHHHHHhhccchhcccchhhhhHHhhhcccchHHHHHHHhhc--chhHHHHHHhhhcCcccccccc-cC
Confidence            999999999999999998765433211100          0000011100000  0011111222233455566665 88


Q ss_pred             CCHHHHHHHhCCHHHHHHHHhCCCCcchhh-ccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcC
Q psy15068        197 FSPLHFAVVKKNLSVVELLIKCKADTNLIV-KVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVG  275 (710)
Q Consensus       197 ~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~  275 (710)
                      .||||.|+..++.+++++|++.+++.+... ..+.+| ||.|+..|+.++++ +|+++|++++.++..|.||||+|+..+
T Consensus       159 ~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~Tp-L~~A~~~~~~~~v~-~Ll~~gadin~~d~~g~t~L~~A~~~~  236 (255)
T d1oy3d_         159 HTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP-LHLAVEAQAASVLE-LLLKAGADPTARMYGGRTPLGSALLRP  236 (255)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCH-HHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHTSS
T ss_pred             cccccccccccccccccchhccccccccccccccccc-ccccccccHHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHHCC
Confidence            999999999999999999999998887654 445666 99999999999999 667788999999999999999999999


Q ss_pred             CHHHHHHHHHcCCC
Q psy15068        276 NLQIVQMLVKRKFD  289 (710)
Q Consensus       276 ~~~~v~~Ll~~g~~  289 (710)
                      +.+++++|+++|++
T Consensus       237 ~~~i~~~Ll~~Ga~  250 (255)
T d1oy3d_         237 NPILARLLRAHGAP  250 (255)
T ss_dssp             CHHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHcCCC
Confidence            99999999999985

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-33  Score=267.50  Aligned_cols=263  Identities=24%  Similarity=0.338  Sum_probs=193.8

Q ss_pred             cccchhhhhhcChhhHHHHHHhhhccCCCccc-cchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcC
Q psy15068         23 RHHHLFSEIMFSEEDAFGYFLQGIINSSSAKS-VELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQG  101 (710)
Q Consensus        23 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g  101 (710)
                      ..|.|+.|++.|+.++|++|+++|+++|.++. .|.||||.|+..|+.+++++|++.+. .++..+..+.+|.++|+..+
T Consensus         5 ~~~~L~~Ai~~~~~e~vk~Ll~~G~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~-~~~~~~~~~~~~~~~~~~~~   83 (285)
T d1wdya_           5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA-DPVLRKKNGATPFLLAAIAG   83 (285)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTCCCHHHHHHHHT
T ss_pred             CcHHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCCCHHHHHHHcCCHHHhhhhccccc-cccccccccchhhHHHhhcC
Confidence            35778888888888888888888888876543 67888888888888888888888887 77777778888888888888


Q ss_pred             cHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccc----------cccCCCchhHHhhhccCCCC
Q psy15068        102 LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRA----------KCSMMVTPILAVSANMSEDS  171 (710)
Q Consensus       102 ~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~----------~~~~~~~~l~~a~~~~~~~~  171 (710)
                      ..+...++++...+....+..+.+++++|+..++..+++.+++...+++.          ....|.|||++|+..+    
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~----  159 (285)
T d1wdya_          84 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKG----  159 (285)
T ss_dssp             CHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHT----
T ss_pred             CccccchhhhhcccccccccCCCchhHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcccCchHHHHHHHcC----
Confidence            88888888887766666777788888888888888888888876655442          2344677777777777    


Q ss_pred             CCHHHHHHHHHHc-CCCcccCCCCCCCCHHHHHHHh----CCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHH
Q psy15068        172 TDTNEIISMLIEN-GANVREKMPFTDFSPLHFAVVK----KNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIV  246 (710)
Q Consensus       172 ~~~~~~~~~Ll~~-~~~~~~~~~~~~~~~l~~A~~~----~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v  246 (710)
                        +.+++++|+++ |++++..+. .+.+++..+...    +..+++++|+++|++++..+..+.+| ||.|+..|+.+++
T Consensus       160 --~~~~~~~Ll~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t~-L~~a~~~~~~~~v  235 (285)
T d1wdya_         160 --HVEVLKILLDEMGADVNACDN-MGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTP-LILAVEKKHLGLV  235 (285)
T ss_dssp             --CHHHHHHHHHTSCCCTTCCCT-TSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCH-HHHHHHTTCHHHH
T ss_pred             --CHHHHHHHHhccCCCcccccC-CCCcccccccccccchHHHHHHHHHHHCCCCCCccCCCCCCc-cchhhhcCcHHHH
Confidence              77777777754 666666655 566655554432    23457777777777777776666666 7777777777777


Q ss_pred             HHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCc
Q psy15068        247 EAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQN  294 (710)
Q Consensus       247 ~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~  294 (710)
                      +++|...|++++..|.+|.||||+|++.|+.+++++|+++|++++..|
T Consensus       236 ~~lL~~~g~din~~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n~~d  283 (285)
T d1wdya_         236 QRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD  283 (285)
T ss_dssp             HHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred             HHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccc
Confidence            755555677777777777777777777777777777777777777665

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-32  Score=264.83  Aligned_cols=275  Identities=26%  Similarity=0.292  Sum_probs=215.7

Q ss_pred             cchhHHHHHHhcCCHHHHHHHHhcCCCCCcccc-CCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhc
Q psy15068         55 VELTLLCSAVWDNKIREVEFLLSTGDHDVNEKL-QDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYL  133 (710)
Q Consensus        55 ~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~  133 (710)
                      ++.|+|+.|++.|++++|++|+++|+ +++.++ ..|+||||+|+..|+.+++++|++.+......+..+.+|.++|+..
T Consensus         4 ~~~~~L~~Ai~~~~~e~vk~Ll~~G~-din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~~~~~~~~   82 (285)
T d1wdya_           4 EDNHLLIKAVQNEDVDLVQQLLEGGA-NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIA   82 (285)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred             CCcHHHHHHHHcCCHHHHHHHHHCCC-CcCccCCCCCCCHHHHHHHcCCHHHhhhhccccccccccccccchhhHHHhhc
Confidence            47799999999999999999999999 998775 4799999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHH
Q psy15068        134 GNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVE  213 (710)
Q Consensus       134 g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~  213 (710)
                      +..+...+++++..+....+..+.++++.++..+      ....+..++....+++.... .  ....            
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~------~~~~~~~~~~~~~~~~~~~~-~--~~~~------------  141 (285)
T d1wdya_          83 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYG------KVKALKFLYKRGANVNLRRK-T--KEDQ------------  141 (285)
T ss_dssp             TCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTT------CHHHHHHHHHTTCCTTCCCC-C--CHHH------------
T ss_pred             CCccccchhhhhcccccccccCCCchhHHHHHhc------chhhhhhhhhhccccccccc-c--hhhh------------
Confidence            9999999999988877777788888888888888      77888888777666544332 0  0000            


Q ss_pred             HHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHc----CCHHHHHHHHHcCCC
Q psy15068        214 LLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHV----GNLQIVQMLVKRKFD  289 (710)
Q Consensus       214 ~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~----~~~~~v~~Ll~~g~~  289 (710)
                               ......+.+| |++|+..|+.+++++++...+++++..+..+.+++..+...    +...++++|+++|++
T Consensus       142 ---------~~~~~~g~t~-L~~A~~~~~~~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~  211 (285)
T d1wdya_         142 ---------ERLRKGGATA-LMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD  211 (285)
T ss_dssp             ---------HHTTCCCCCH-HHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCC
T ss_pred             ---------hhhcccCchH-HHHHHHcCCHHHHHHHHhccCCCcccccCCCCcccccccccccchHHHHHHHHHHHCCCC
Confidence                     0112234444 77777777777777555566777777777777766665443    345688888888888


Q ss_pred             CCCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCcchhhhhhccCCcccccHHHHHHHHHHHHHHHhcCC
Q psy15068        290 INAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTE  369 (710)
Q Consensus       290 ~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~  369 (710)
                      ++.++..|.||||.|+..++.  +++++|++                                             ..|.
T Consensus       212 ~n~~~~~g~t~L~~a~~~~~~--~~v~~lL~---------------------------------------------~~g~  244 (285)
T d1wdya_         212 VNVRGERGKTPLILAVEKKHL--GLVQRLLE---------------------------------------------QEHI  244 (285)
T ss_dssp             SSCCCTTSCCHHHHHHHTTCH--HHHHHHHH---------------------------------------------SSSC
T ss_pred             CCccCCCCCCccchhhhcCcH--HHHHHHHH---------------------------------------------cCCC
Confidence            888888888888888888876  44444443                                             2467


Q ss_pred             CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchh
Q psy15068        370 NINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTE  408 (710)
Q Consensus       370 ~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~  408 (710)
                      +++.++.+|.||||+|+..|+.+++++|+++|+++|..+
T Consensus       245 din~~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n~~d  283 (285)
T d1wdya_         245 EINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD  283 (285)
T ss_dssp             CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred             CCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccc
Confidence            788888889999999999999999999999999988754

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.1e-33  Score=269.41  Aligned_cols=267  Identities=22%  Similarity=0.285  Sum_probs=220.1

Q ss_pred             cHHHHHHH-cCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCcchhhhhhccC
Q psy15068        266 SLLHKACH-VGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLK  344 (710)
Q Consensus       266 t~L~~A~~-~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~  344 (710)
                      ||||++++ .|+.++++.|.+.+++... ..+|+||||+|+..|+.  +++++|+.                        
T Consensus         2 ~p~~~~~~~~~~~~~~~~l~~~~~n~~~-~~~g~T~Lh~A~~~g~~--~~v~~Ll~------------------------   54 (277)
T d2fo1e1           2 SPIKLHTEAAGSYAITEPITRESVNIID-PRHNRTVLHWIASNSSA--EKSEDLIV------------------------   54 (277)
T ss_dssp             CCCHHHHHHHSSSCCCSCCSTTTTTTCC-CSSCCCHHHHHHCTTCC--SCCTTHHH------------------------
T ss_pred             ChHHHHHHhCCCHHHHHHHHhcCCCcCC-CCCCccHHHHHHHcCCH--HHHHHHHh------------------------
Confidence            78885544 5777888888787776543 24589999999999988  99999988                        


Q ss_pred             CcccccHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCcccc
Q psy15068        345 DPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCF  424 (710)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~  424 (710)
                                    ...+.+++.|+++|.++.+|.||||+|+..|+.+++++|+++|++++..+..             |
T Consensus        55 --------------~~~~~~l~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~n~~~~~-------------g  107 (277)
T d2fo1e1          55 --------------HEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKS-------------E  107 (277)
T ss_dssp             --------------HHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT-------------C
T ss_pred             --------------cchhHHHHcCCCccccCCCCCeeecccccccccccccccccccccccccccc-------------c
Confidence                          7788899999999999999999999999999999999999999999988777             9


Q ss_pred             CCHHHHHHHccCcHHHHHHHHHCC---CCCCCCCCCCCCCHHHHHHHcCCHhHH---HHHHHcCCCCCchhhccchHHHH
Q psy15068        425 RSALQYACKHKNNIEMVKLLLLHG---ADVNDTSNKPKQKPLAVAIQSGDFQIV---KELQNYGAQIDKENYLKNKEAAR  498 (710)
Q Consensus       425 ~t~l~~A~~~~~~~~~~~~Ll~~~---~~~~~~~~~~~~t~L~~A~~~~~~~~v---~~Ll~~~~~~~~~~~~~~~~~~~  498 (710)
                      .||++.|+.. ++.++++++...+   ..++.. +..+.++.+.+...+..+..   ..+.+........          
T Consensus       108 ~t~l~~a~~~-~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------  175 (277)
T d2fo1e1         108 RSALHQAAAN-RDFGMMVYMLNSTKLKGDIEEL-DRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYD----------  175 (277)
T ss_dssp             CCHHHHHHHT-TCHHHHHHHTTSHHHHHTTSCC-CTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCC----------
T ss_pred             cccccchhhh-cchhhhhhhhhccccccccccc-ccccchhHHHHHhccccccccccccccccccccccc----------
Confidence            9999999999 9999999887764   234444 67788899888887654432   2222222111100          


Q ss_pred             hhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCC
Q psy15068        499 IAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLL-DNGADV  577 (710)
Q Consensus       499 ~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~  577 (710)
                                                               .....+..+..|.||||+++..++.+++++++ ..+.++
T Consensus       176 -----------------------------------------~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~  214 (277)
T d2fo1e1         176 -----------------------------------------GAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNK  214 (277)
T ss_dssp             -----------------------------------------SGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCT
T ss_pred             -----------------------------------------ccccccccccCCCCccccccccccccccccccccccccc
Confidence                                                     01123456778999999999999999999755 568999


Q ss_pred             cccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhh
Q psy15068        578 NFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLI  641 (710)
Q Consensus       578 ~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~  641 (710)
                      +.+|..|+||||+|+.. |+.++|++|+++|++++.++ ..|+||||+|++.|+.++|++|++.
T Consensus       215 ~~~d~~g~tpL~~A~~~-g~~~iv~~Ll~~gadin~~d-~~G~T~L~~A~~~~~~~iv~lL~~c  276 (277)
T d2fo1e1         215 DKQDEDGKTPIMLAAQE-GRIEVVMYLIQQGASVEAVD-ATDHTARQLAQANNHHNIVDIFDRC  276 (277)
T ss_dssp             TCCCTTCCCHHHHHHHH-TCHHHHHHHHHTTCCSSCCC-SSSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred             cccCCCCCCHHHHHHHc-CCHHHHHHHHHCcCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHh
Confidence            99999999999999999 99999999999999999999 9999999999999999999999863

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.3e-32  Score=255.34  Aligned_cols=222  Identities=22%  Similarity=0.236  Sum_probs=170.1

Q ss_pred             cHHHHHHHcCCHHHHHHHHHc-CCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCCCCCC--CC
Q psy15068        380 TPLLFAAKHCDLQSAKYLIQK-GANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDT--SN  456 (710)
Q Consensus       380 t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~--~~  456 (710)
                      +|||+|+..|+.+.++.|++. +.+++..+..             |+||||+|+.. ++.+++++|+++|++++..  .+
T Consensus         2 ~pLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~-------------G~TpL~~A~~~-g~~~iv~~Ll~~ga~~~~~~~~~   67 (229)
T d1ixva_           2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQD-------------GRIPLHWSVSF-QAHEITSFLLSKMENVNLDDYPD   67 (229)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHHCGGGTTCCCTT-------------SCCHHHHHHHT-TCHHHHHHHHTTCTTCCGGGCCC
T ss_pred             HhHHHHHHcCCHHHHHHHHHcCCCcccccCCC-------------CCCHHHHHHHc-CCccccchhhhhhcccccccccc
Confidence            688888888888888888774 4566665555             88888888888 8888888888888877532  36


Q ss_pred             CCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHH
Q psy15068        457 KPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKK  536 (710)
Q Consensus       457 ~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  536 (710)
                      ..|.+|+++++..+..++++.++..+...+..                                                
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------   99 (229)
T d1ixva_          68 DSGWTPFHIACSVGNLEVVKSLYDRPLKPDLN------------------------------------------------   99 (229)
T ss_dssp             TTSCCHHHHHHHHTCHHHHHHHHSSSSCCCTT------------------------------------------------
T ss_pred             cccccccccccccccccccccccccccccccc------------------------------------------------
Confidence            67888888888888888888887776554322                                                


Q ss_pred             HHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcC-CCCCCCC
Q psy15068        537 NIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHG-AYYDMKD  615 (710)
Q Consensus       537 ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g-~~~~~~~  615 (710)
                               ..+..+.||++.++..++.+++++|++.|.+++..|..|+||||+|+.. ++.+++++|++.+ .+++.++
T Consensus       100 ---------~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~-~~~~~~~~Ll~~~~~~in~~d  169 (229)
T d1ixva_         100 ---------KITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASV-GSLKLIELLCGLGKSAVNWQD  169 (229)
T ss_dssp             ---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHH-TCHHHHHHHHTTTCCCSCCCC
T ss_pred             ---------ccccccccccccccccchhhhhhhhhhhcccccccCCCCCCccchhhhc-ccccccccccccccccccccc
Confidence                     2445566778888888888888888888888877788888888888887 7888888888776 5667777


Q ss_pred             CCCCCCHhHHHHhCCChhHHHHHHh-hhhccccCCCCCCCchhhHHHHhhhcccccceeehh
Q psy15068        616 GKTGKTPLKHAEAGKNRDIIDLLHL-IDNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFE  676 (710)
Q Consensus       616 ~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~~A~~~~~~~~L~~~~g~~  676 (710)
                       ..|.||||+|+..|+.+++++|++ .|+|++.+|..|+||| |+|+...-+++| +++|+|
T Consensus       170 -~~g~TpLh~A~~~~~~~~v~~Ll~~~gad~~~~d~~g~t~l-~~A~~~~~~~~L-l~~g~d  228 (229)
T d1ixva_         170 -KQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAE-DVALNEQVKKFF-LNNVVD  228 (229)
T ss_dssp             -TTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCCCTTSCCTG-GGCSCHHHHHHH-HHHCCC
T ss_pred             -cccCCchhhhcccccHHHHHHHHHhcCCCCCCcCCCCCCHH-HHHhhHHHHHHH-HHcCCC
Confidence             778888888888888888888876 4788888888888888 887754447777 777775

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=7.8e-33  Score=265.44  Aligned_cols=263  Identities=17%  Similarity=0.192  Sum_probs=200.5

Q ss_pred             ccchhhh-hhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHH--------HhcCCCCCccccCCCCcHH
Q psy15068         24 HHHLFSE-IMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFL--------LSTGDHDVNEKLQDGRTAL   94 (710)
Q Consensus        24 ~~~l~~a-~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~L--------l~~~~~~~~~~~~~g~t~L   94 (710)
                      +|||+.+ ...|...+++.|.+.+++.... ..|+||||+|+..|+.++|++|        ++.|+ ++|.+|..|+|||
T Consensus         1 ~~p~~~~~~~~~~~~~~~~l~~~~~n~~~~-~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Ga-dvn~~d~~G~TpL   78 (277)
T d2fo1e1           1 ESPIKLHTEAAGSYAITEPITRESVNIIDP-RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGA-DVNAMDCDENTPL   78 (277)
T ss_dssp             CCCCHHHHHHHSSSCCCSCCSTTTTTTCCC-SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCC-CTTCCCTTSCCHH
T ss_pred             CChHHHHHHhCCCHHHHHHHHhcCCCcCCC-CCCccHHHHHHHcCCHHHHHHHHhcchhHHHHcCC-CccccCCCCCeee
Confidence            4677733 3357788888888877765432 4599999999999999998876        56688 9999999999999


Q ss_pred             HHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCC---CCccccccCCCchhHHhhhccCCCC
Q psy15068         95 YMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKK---ADVRAKCSMMVTPILAVSANMSEDS  171 (710)
Q Consensus        95 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g---~~~~~~~~~~~~~l~~a~~~~~~~~  171 (710)
                      |+|+..|+.+++++|+++|++++.+|..|.|||++|+..++.++++++...+   ..++..+....++.+.+....... 
T Consensus        79 h~A~~~g~~~iv~~Ll~~Gad~n~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  157 (277)
T d2fo1e1          79 MLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRD-  157 (277)
T ss_dssp             HHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTT-
T ss_pred             ccccccccccccccccccccccccccccccccccchhhhcchhhhhhhhhcccccccccccccccchhHHHHHhccccc-
Confidence            9999999999999999999999999999999999999999999999988764   345556666777777766655221 


Q ss_pred             CCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHc
Q psy15068        172 TDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLN  251 (710)
Q Consensus       172 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~  251 (710)
                        ....+..+.+.........                          ....+..+..+.++ |+.++..++.++++.++.
T Consensus       158 --~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~g~t~-L~~~~~~~~~~~~~~~l~  208 (277)
T d2fo1e1         158 --QVASAKLLVEKGAKVDYDG--------------------------AARKDSEKYKGRTA-LHYAAQVSNMPIVKYLVG  208 (277)
T ss_dssp             --HHHHHHHHHHHTCCSSCCS--------------------------GGGTSSSSCCCCCT-HHHHHSSCCHHHHHHHHH
T ss_pred             --ccccccccccccccccccc--------------------------cccccccccCCCCc-cccccccccccccccccc
Confidence              3444444444332211100                          01112233445555 888888888888876677


Q ss_pred             cCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhh
Q psy15068        252 SKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQ  320 (710)
Q Consensus       252 ~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~  320 (710)
                      ..+.+.+..+..|.||||+|+..|+.++|++|+++|++++.+|.+|.|||++|+..|+.  +++++|++
T Consensus       209 ~~~~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~gadin~~d~~G~T~L~~A~~~~~~--~iv~lL~~  275 (277)
T d2fo1e1         209 EKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHH--NIVDIFDR  275 (277)
T ss_dssp             HSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCH--HHHHHHHT
T ss_pred             cccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHcCCH--HHHHHHHH
Confidence            77788888888888888888888888888888888888888888888888888888877  88888875

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.9e-32  Score=252.01  Aligned_cols=222  Identities=26%  Similarity=0.295  Sum_probs=157.2

Q ss_pred             hhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCC---CCCCCCCCHHHHHHhc
Q psy15068         57 LTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN---DRDEKGYTPLHLACYL  133 (710)
Q Consensus        57 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~~~~~t~L~~A~~~  133 (710)
                      +||||+||..|+.++|+.|++.++.+++.+|.+|+||||+|+..|+.+++++|+++|++++   ..+..|.+|+++|+..
T Consensus         1 n~pLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~   80 (229)
T d1ixva_           1 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSV   80 (229)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCTTSCCHHHHHHHH
T ss_pred             CHhHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHcCCccccchhhhhhccccccccccccccccccccccc
Confidence            3788888888888888888886554788888888888888888888888888888888875   4566778888888888


Q ss_pred             CCHHHHHHHHhCCCCc--cccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHH
Q psy15068        134 GNKNIVKFLLSKKADV--RAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSV  211 (710)
Q Consensus       134 g~~~iv~~Ll~~g~~~--~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~  211 (710)
                      +..++++.++..+...  ...+..+.++++.++..+      +.+++++|+..|......+. .|.|||+.|+..|+.++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~~~~l~~~~~~~~~~~~-~g~t~l~~a~~~~~~~~  153 (229)
T d1ixva_          81 GNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKK------WFEVSQFLIENGASVRIKDK-FNQIPLHRAASVGSLKL  153 (229)
T ss_dssp             TCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHHTCHHH
T ss_pred             cccccccccccccccccccccccccccccccccccc------hhhhhhhhhhhcccccccCC-CCCCccchhhhcccccc
Confidence            8888888888877644  334555666666666666      66666666666666665555 66677777777777777


Q ss_pred             HHHHHhCC-CCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy15068        212 VELLIKCK-ADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFD  289 (710)
Q Consensus       212 v~~Ll~~g-~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~  289 (710)
                      +++|++.+ .+++..+..+.+| ||+|+..|+.++++++|...|++++..|..|.|||++|+.   .+++++|+++|+|
T Consensus       154 ~~~Ll~~~~~~in~~d~~g~Tp-Lh~A~~~~~~~~v~~Ll~~~gad~~~~d~~g~t~l~~A~~---~~~~~~Ll~~g~d  228 (229)
T d1ixva_         154 IELLCGLGKSAVNWQDKQGWTP-LFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN---EQVKKFFLNNVVD  228 (229)
T ss_dssp             HHHHHTTTCCCSCCCCTTSCCH-HHHHHHTTCHHHHHHHHHHHCCCSCCCCTTSCCTGGGCSC---HHHHHHHHHHCCC
T ss_pred             cccccccccccccccccccCCc-hhhhcccccHHHHHHHHHhcCCCCCCcCCCCCCHHHHHhh---HHHHHHHHHcCCC
Confidence            77776665 3455555556655 6666666666666633334566666666666666666653   3566666666654

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=100.00  E-value=5.1e-32  Score=261.44  Aligned_cols=244  Identities=25%  Similarity=0.289  Sum_probs=207.7

Q ss_pred             ccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhc
Q psy15068         54 SVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYL  133 (710)
Q Consensus        54 ~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~  133 (710)
                      ..+.|+|+.||..|++++|++|+++|+ ++|.+|..|+||||+|+..|+.+++++|+++|++....+..+.+||++|+..
T Consensus        38 ~~~~t~l~~A~~~G~~~~v~~Ll~~Ga-dvn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~~L~~a~~~  116 (291)
T d1s70b_          38 FDDGAVFLAACSSGDTEEVLRLLERGA-DINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASC  116 (291)
T ss_dssp             ECHHHHHHHHHHHTCHHHHHHHHHHCC-CTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred             CCCchHHHHHHHcCCHHHHHHHHHCCC-CCCccCCCCCcHHHHHHhcCCceeeeeecccccccccccccccccccccccc
Confidence            356799999999999999999999999 9999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHc-CCCcccCCCCCCCCHHHHHHHhCCHHHH
Q psy15068        134 GNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIEN-GANVREKMPFTDFSPLHFAVVKKNLSVV  212 (710)
Q Consensus       134 g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~~l~~A~~~~~~~~v  212 (710)
                      ++.+++++|+++|+..+..+..+.+++++|+..+      ..+.++.++.. +.+....        .............
T Consensus       117 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~------~~~~~~~ll~~~~~~~~~~--------~~~~~~~~~~~~~  182 (291)
T d1s70b_         117 GYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEA------MEELLQNEVNRQGVDIEAA--------RKEEERIMLRDAR  182 (291)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHH------HHHHHHHHHHHHTCCHHHH--------HHHHHHHHHHHHH
T ss_pred             cccchhhcccccCcccccccccCccccccccccc------cchhccccccccccccccc--------cccccccccccch
Confidence            9999999999999999999999999999999999      99999888854 3332211        1111111223334


Q ss_pred             HHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q psy15068        213 ELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINA  292 (710)
Q Consensus       213 ~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~  292 (710)
                      ..+..........+..+.++ |+.|+..|+.++++ +|.+.|++++..+..|+||||+|+..|+.++|++|+++|++++.
T Consensus       183 ~~~~~~~~~~~~~~~~g~t~-L~~a~~~~~~~~~~-~Ll~~g~din~~~~~g~TpL~~A~~~g~~~iv~lLl~~Gadv~~  260 (291)
T d1s70b_         183 QWLNSGHINDVRHAKSGGTA-LHVAAAKGYTEVLK-LLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEA  260 (291)
T ss_dssp             HHHHHTCCCCCCCTTTCCCH-HHHHHHHTCHHHHH-HHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred             hhhcccccccccccCCCCCh-hhHHHHcCChhhhc-ccccceecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence            44555555566666777777 99999999999999 77789999999999999999999999999999999999999999


Q ss_pred             CcCCCCChHHHHHHhCCCcHHHHHHHhh
Q psy15068        293 QNRYFLPPMFFAIGMGRKHTHVAEYLLQ  320 (710)
Q Consensus       293 ~~~~~~t~l~~a~~~~~~~~~~~~~Ll~  320 (710)
                      +|..|.|||++|+.      +++++|.+
T Consensus       261 ~d~~G~TaL~~A~e------~~~~~L~~  282 (291)
T d1s70b_         261 VNKVGQTAFDVADE------DILGYLEE  282 (291)
T ss_dssp             CCTTSCCTTTSCCS------GGGHHHHH
T ss_pred             cCCCCCCHHHHHHH------HHHHHHHH
Confidence            99999999999963      45566554

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.98  E-value=9.9e-32  Score=259.43  Aligned_cols=231  Identities=25%  Similarity=0.362  Sum_probs=166.3

Q ss_pred             HHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcH
Q psy15068        359 QIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNI  438 (710)
Q Consensus       359 ~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~  438 (710)
                      +++++|+++|++++..+.+|.||||+|+..|+.+++++|+++|++.......             +.+||+.++.. ++.
T Consensus        54 ~~v~~Ll~~Gadvn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~-------------~~~~L~~a~~~-~~~  119 (291)
T d1s70b_          54 EEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNE-------------GWIPLHAAASC-GYL  119 (291)
T ss_dssp             HHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-------------SCCHHHHHHHH-TCH
T ss_pred             HHHHHHHHCCCCCCccCCCCCcHHHHHHhcCCceeeeeeccccccccccccc-------------ccccccccccc-ccc
Confidence            5555566678888888888888888888888888888888888877766655             77888888887 888


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHc-CCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHh
Q psy15068        439 EMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNY-GAQIDKENYLKNKEAARIAHSTTELEERKKINDLLK  517 (710)
Q Consensus       439 ~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~  517 (710)
                      ++++.|+++|...+.. +..+.+++++|+..+..++++.++.. +.++....  .....+                    
T Consensus       120 ~~~~~l~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~--~~~~~~--------------------  176 (291)
T d1s70b_         120 DIAEYLISQGAHVGAV-NSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAAR--KEEERI--------------------  176 (291)
T ss_dssp             HHHHHHHHTTCCTTCC-CTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHH--HHHHHH--------------------
T ss_pred             chhhcccccCcccccc-cccCccccccccccccchhcccccccccccccccc--cccccc--------------------
Confidence            8888888888777766 77788888888888888888877754 32221111  111111                    


Q ss_pred             hhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCc
Q psy15068        518 LNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSN  597 (710)
Q Consensus       518 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~  597 (710)
                                 ........+..........+..|.||||.|+..|+.+++++|++.|++++.++..|+||||+|+.. |+
T Consensus       177 -----------~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~din~~~~~g~TpL~~A~~~-g~  244 (291)
T d1s70b_         177 -----------MLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHW-GK  244 (291)
T ss_dssp             -----------HHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHT-TC
T ss_pred             -----------ccccchhhhcccccccccccCCCCChhhHHHHcCChhhhcccccceecccccccCCCCHHHHHHHc-CC
Confidence                       111222233334444555667788888888888888888888888888888888888888888887 88


Q ss_pred             hHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhh
Q psy15068        598 DNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDN  643 (710)
Q Consensus       598 ~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~  643 (710)
                      .++|++|+++|++++.+| ..|.||||+|++    +++++|.+...
T Consensus       245 ~~iv~lLl~~Gadv~~~d-~~G~TaL~~A~e----~~~~~L~~~~~  285 (291)
T d1s70b_         245 EEACRILVENLCDMEAVN-KVGQTAFDVADE----DILGYLEELQK  285 (291)
T ss_dssp             HHHHHHHHHTTCCTTCCC-TTSCCTTTSCCS----GGGHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCCcC-CCCCCHHHHHHH----HHHHHHHHHhh
Confidence            888888888888888887 788888888864    57777766544

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.6e-29  Score=232.06  Aligned_cols=198  Identities=24%  Similarity=0.251  Sum_probs=170.4

Q ss_pred             CCCcHHHHHHHcCCH----HHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCCCC
Q psy15068        377 DMITPLLFAAKHCDL----QSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVN  452 (710)
Q Consensus       377 ~~~t~L~~A~~~~~~----~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~  452 (710)
                      +|.||||+|+..|+.    ++++++...|++++..+..             |+||||+|+.. ++.+++++|++.|++++
T Consensus         1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~~~in~~d~~-------------g~TpLh~A~~~-~~~~iv~~L~~~g~d~~   66 (221)
T d1iknd_           1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNL-------------QQTPLHLAVIT-NQPEIAEALLGAGCDPE   66 (221)
T ss_dssp             CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTT-------------CCCHHHHHHHT-TCHHHHHCCCSCCCCSC
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHHHHhCCCCcccCCCC-------------CCccccccccc-ccccccccccccccccc
Confidence            588999999999985    4556677789899887777             99999999999 99999999999999998


Q ss_pred             CCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchH
Q psy15068        453 DTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYD  532 (710)
Q Consensus       453 ~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  532 (710)
                      .. +..|.|||+.++..++.++++.|++.+.......                                           
T Consensus        67 ~~-d~~g~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~-------------------------------------------  102 (221)
T d1iknd_          67 LR-DFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHS-------------------------------------------  102 (221)
T ss_dssp             CC-CTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSC-------------------------------------------
T ss_pred             cc-ccccccccccccccccccccchhhhhcccccccc-------------------------------------------
Confidence            87 8999999999999999999999999876544221                                           


Q ss_pred             HHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCcHHHHHHhcCCchHHHHHHHHcCCCC
Q psy15068        533 EVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKS-ATGFTALHMACRFHSNDNIVRKLLHHGAYY  611 (710)
Q Consensus       533 ~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~  611 (710)
                                ..+.....|.||||.|+..++.+++++|++.|++++..+ ..|+||||+|++. |+.+++++|+++|+|+
T Consensus       103 ----------~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~-g~~~~v~~Ll~~gad~  171 (221)
T d1iknd_         103 ----------ILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDL-QNPDLVSLLLKCGADV  171 (221)
T ss_dssp             ----------GGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT-TCHHHHHHHHTTTCCS
T ss_pred             ----------cccccccccchhhhHHhhcCChhheeeecccCcccccccccCCCCcccccccc-ccHHHHHHHHhcCCcc
Confidence                      123345668899999999999999999999999998765 5799999999999 9999999999999999


Q ss_pred             CCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhc
Q psy15068        612 DMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNL  644 (710)
Q Consensus       612 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~  644 (710)
                      +.++ ..|+||||+|+..++.+++++|++.+.+
T Consensus       172 ~~~~-~~G~tpl~~A~~~~~~~~~~~l~~~~~~  203 (221)
T d1iknd_         172 NRVT-YQGYSPYQLTWGRPSTRIQQQLGQLTLE  203 (221)
T ss_dssp             CCCC-TTCCCGGGGCTTSSCHHHHHHHHTTSCG
T ss_pred             cccC-CCCCCHHHHHHHCCCHHHHHHHHHcCCc
Confidence            9999 9999999999999999999999997654

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.96  E-value=1.5e-28  Score=223.98  Aligned_cols=206  Identities=23%  Similarity=0.257  Sum_probs=167.5

Q ss_pred             HHHHHHHHHcCCCCCch-hhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHc
Q psy15068        391 LQSAKYLIQKGANVNLT-ETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQS  469 (710)
Q Consensus       391 ~~~~~~Ll~~g~~~~~~-~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~  469 (710)
                      .++|++|+++|++++.. +..             |.||||+||.. |+.+++++|++.|++++.. +..+.++++.++..
T Consensus         2 ~~~v~~Ll~~g~din~~~d~~-------------G~t~L~~A~~~-g~~e~v~~Ll~~g~~~n~~-~~~~~~~~~~~~~~   66 (209)
T d1ot8a_           2 AQVISDLLAQGAELNATMDKT-------------GETSLHLAARF-ARADAAKRLLDAGADANSQ-DNTGRTPLHAAVAA   66 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-------------CCCHHHHHHHT-TCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHT
T ss_pred             HHHHHHHHHCCCCcCcCcCCC-------------CCCHHHHHHHc-CCHHHHHHHHhhccccccc-cccccccccccccc
Confidence            58999999999999874 666             99999999999 9999999999999999988 89999999999999


Q ss_pred             CCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCC
Q psy15068        470 GDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSE  549 (710)
Q Consensus       470 ~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~  549 (710)
                      +.................... ..+..+  .+.+                      .........+.|.+.+.+++.++.
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~----------------------~~~~~~~~~~~L~~~~~~~~~~~~  121 (209)
T d1ot8a_          67 DAMGVFQILLRNRATNLNARM-HDGTTP--LILA----------------------ARLAIEGMVEDLITADADINAADN  121 (209)
T ss_dssp             TCHHHHHHHHTCTTCCTTCCC-TTCCCH--HHHH----------------------HHTTCTTHHHHHHHTTCCTTCBCT
T ss_pred             ccccccccccccccccccccc-cccccc--cccc----------------------ccccchhhhhhhhhhcccccccCC
Confidence            998887777665443322110 222222  3333                      555667777788888888888888


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhC
Q psy15068        550 RRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAG  629 (710)
Q Consensus       550 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~  629 (710)
                      .|.|||+.++..+..++++.+++++.+++..|..|.||||+|+.. |+.++|++|+++|++++..+ ..|+||||+|+++
T Consensus       122 ~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~TpL~~A~~~-g~~~~v~~Ll~~gad~n~~d-~~g~Tpl~~A~~~  199 (209)
T d1ot8a_         122 SGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAARE-GSYEASKALLDNFANREITD-HMDRLPRDVASER  199 (209)
T ss_dssp             TSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT-TCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHT
T ss_pred             CCCCcchhhcccCcceeeeeeccccccccccccccccccchhccc-cHHHHHHHHHHCCCCCCCcC-CCCCCHHHHHHHc
Confidence            888888888888888888888888888888888888888888888 88888888888888888888 8888888888888


Q ss_pred             CChhHHHHH
Q psy15068        630 KNRDIIDLL  638 (710)
Q Consensus       630 ~~~~~v~~L  638 (710)
                      |+.++|++|
T Consensus       200 ~~~~iv~lL  208 (209)
T d1ot8a_         200 LHHDIVRLL  208 (209)
T ss_dssp             TCHHHHHHH
T ss_pred             CCHHHHhhc
Confidence            888888876

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2e-28  Score=227.06  Aligned_cols=217  Identities=26%  Similarity=0.285  Sum_probs=136.1

Q ss_pred             cchhHHHHHHhcCCHHHHHHHHh----cCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Q psy15068         55 VELTLLCSAVWDNKIREVEFLLS----TGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLA  130 (710)
Q Consensus        55 ~~~t~L~~A~~~g~~~~v~~Ll~----~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A  130 (710)
                      +|.||||.||..|+.++|++|++    .|+ +++.+|..|+||||+|+..|+.+++++|+++|++++..+..+.++++.|
T Consensus         2 dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~-~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~a   80 (228)
T d1k1aa_           2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGR-ELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLA   80 (228)
T ss_dssp             TTCCHHHHHHHTTCHHHHHHHHHHHHHTTC-CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHHHHHCCC-CCCccCCCCCccceehhcccccccccccccccccccccccccccccccc
Confidence            46777777777777777776664    556 7777777777777777777777777777777777777777777777777


Q ss_pred             HhcCCHHHHHHHHhCCCC----ccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHh
Q psy15068        131 CYLGNKNIVKFLLSKKAD----VRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVK  206 (710)
Q Consensus       131 ~~~g~~~iv~~Ll~~g~~----~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~  206 (710)
                      ...++.++++.+......    .+....                                        ...++++.+...
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~l~~~~~~  120 (228)
T d1k1aa_          81 CEHRSPTCLRALLDSAAPGTLDLEARNY----------------------------------------DGLTALHVAVNT  120 (228)
T ss_dssp             HHTTCHHHHHHHHHHSCTTSCCTTCCCT----------------------------------------TSCCHHHHHHHH
T ss_pred             cccccccchhhhhhcccccccccccccc----------------------------------------cccccccccccc
Confidence            777777777666554321    112222                                        334455555555


Q ss_pred             CCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy15068        207 KNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKR  286 (710)
Q Consensus       207 ~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~  286 (710)
                      ......+.|.....+...........+++.|+..+...+++ .+.+.+..++..+..|.|||++|+..|+.+++++|+++
T Consensus       121 ~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~-~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~  199 (228)
T d1k1aa_         121 ECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQ-LLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRS  199 (228)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHH-HHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHT
T ss_pred             ccchhhhhhhccccccccccccchhhHHHHHHHhhhhhhhh-hhhhhccccccccccCcchHHHHHHcCCHHHHHHHHHC
Confidence            55555555555544433322222222266666666666665 44445556666666666777777777777777777777


Q ss_pred             CCCCCCCcCCCCChHHHHHHhCCCcHHHH
Q psy15068        287 KFDINAQNRYFLPPMFFAIGMGRKHTHVA  315 (710)
Q Consensus       287 g~~~~~~~~~~~t~l~~a~~~~~~~~~~~  315 (710)
                      |++++.++..|.|||++|+..++.  +++
T Consensus       200 Gad~n~~d~~G~TpL~~A~~~~~~--div  226 (228)
T d1k1aa_         200 GADSSLKNCHNDTPLMVARSRRVI--DIL  226 (228)
T ss_dssp             TCCTTCCCTTSCCTTTTCSSHHHH--HHH
T ss_pred             CCCCCCCCCCCCCHHHHHHhCCCc--ccc
Confidence            777777777777777777666644  554

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.7e-28  Score=225.24  Aligned_cols=212  Identities=21%  Similarity=0.181  Sum_probs=168.9

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHH----cCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhh
Q psy15068         89 DGRTALYMAILQGLYKMVTLLIH----HGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVS  164 (710)
Q Consensus        89 ~g~t~L~~A~~~g~~~~v~~Ll~----~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~  164 (710)
                      +|+||||+||..|+.++++.|++    .|++++.+|..|+||||+|+..|+.+++++|+++|++.+.....+.++++.+.
T Consensus         2 dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~a~   81 (228)
T d1k1aa_           2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLAC   81 (228)
T ss_dssp             TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHHHHHCCCCCCccCCCCCccceehhccccccccccccccccccccccccccccccccc
Confidence            68999999999999999988875    78999999999999999999999999999999999988887777777777766


Q ss_pred             hccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHH
Q psy15068        165 ANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVK  244 (710)
Q Consensus       165 ~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~  244 (710)
                      ...      +.++++.+.........                              ..+........+ ++.+.......
T Consensus        82 ~~~------~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~-l~~~~~~~~~~  124 (228)
T d1k1aa_          82 EHR------SPTCLRALLDSAAPGTL------------------------------DLEARNYDGLTA-LHVAVNTECQE  124 (228)
T ss_dssp             HTT------CHHHHHHHHHHSCTTSC------------------------------CTTCCCTTSCCH-HHHHHHHTCHH
T ss_pred             ccc------cccchhhhhhccccccc------------------------------cccccccccccc-cccccccccch
Confidence            666      55555555443322111                              111122233444 88999988888


Q ss_pred             HHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccc
Q psy15068        245 IVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSI  324 (710)
Q Consensus       245 ~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~  324 (710)
                      ..+.+..............+.++|+.|+..+...++++++++|.+.+..+..|.|||++|+..|+.  +++++|++ .+.
T Consensus       125 ~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~--~~v~~Ll~-~Ga  201 (228)
T d1k1aa_         125 TVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLL--PLVRTLVR-SGA  201 (228)
T ss_dssp             HHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCH--HHHHHHHH-TTC
T ss_pred             hhhhhhccccccccccccchhhHHHHHHHhhhhhhhhhhhhhccccccccccCcchHHHHHHcCCH--HHHHHHHH-CCC
Confidence            888444444444556667889999999999999999999999999999999999999999999988  99999998 688


Q ss_pred             cCCCCCCCCcchhhhh
Q psy15068        325 NVNLPIKRPNLLLDTV  340 (710)
Q Consensus       325 ~~~~~~~~~~~~~~~~  340 (710)
                      +++..+..+...+...
T Consensus       202 d~n~~d~~G~TpL~~A  217 (228)
T d1k1aa_         202 DSSLKNCHNDTPLMVA  217 (228)
T ss_dssp             CTTCCCTTSCCTTTTC
T ss_pred             CCCCCCCCCCCHHHHH
Confidence            9998888887766643

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5e-29  Score=228.71  Aligned_cols=197  Identities=21%  Similarity=0.204  Sum_probs=113.4

Q ss_pred             cchhHHHHHHhcCCH----HHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Q psy15068         55 VELTLLCSAVWDNKI----REVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLA  130 (710)
Q Consensus        55 ~~~t~L~~A~~~g~~----~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A  130 (710)
                      +|.||||+|+..|+.    ++++++...++ ++|.+|..|+||||+|+..|+.+++++|++.|++++..|..|.|||++|
T Consensus         1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~~-~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~~d~~g~t~l~~~   79 (221)
T d1iknd_           1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLA-FLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLA   79 (221)
T ss_dssp             CCCCTTHHHHHTTCSSSSSCCCC-----CC-CCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHH
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHHHHhCCC-CcccCCCCCCccccccccccccccccccccccccccccccccccccccc
Confidence            366777777777764    34444555566 6777777777777777777777777777777777777777777777777


Q ss_pred             HhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHH
Q psy15068        131 CYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLS  210 (710)
Q Consensus       131 ~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~  210 (710)
                      +..|+.+++++|++.+........                                  .......+.||++.|+..++.+
T Consensus        80 ~~~~~~~~~~~l~~~~~~~~~~~~----------------------------------~~~~~~~~~t~l~~a~~~~~~~  125 (221)
T d1iknd_          80 CEQGCLASVGVLTQSCTTPHLHSI----------------------------------LKATNYNGHTCLHLASIHGYLG  125 (221)
T ss_dssp             HHHTCHHHHHHHHHSTTTTSSSCG----------------------------------GGCCCTTCCCHHHHHHHTTCHH
T ss_pred             cccccccccchhhhhccccccccc----------------------------------ccccccccchhhhHHhhcCChh
Confidence            777777777777766544321100                                  0001113445555555555555


Q ss_pred             HHHHHHhCCCCcchhhcc-CCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q psy15068        211 VVELLIKCKADTNLIVKV-NQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKF  288 (710)
Q Consensus       211 ~v~~Ll~~g~~~~~~~~~-~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~  288 (710)
                      ++++|++.|+.++..+.. |.+| ||+|+..|+.++++ +|+++|++++..+..|.|||++|+..++.+++++|++.+.
T Consensus       126 ~~~~l~~~~~~~~~~~~~~G~T~-L~~A~~~g~~~~v~-~Ll~~gad~~~~~~~G~tpl~~A~~~~~~~~~~~l~~~~~  202 (221)
T d1iknd_         126 IVELLVSLGADVNAQEPCNGRTA-LHLAVDLQNPDLVS-LLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTL  202 (221)
T ss_dssp             HHHHHHHHTCCTTCCCTTTCCCH-HHHHHHTTCHHHHH-HHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSC
T ss_pred             heeeecccCcccccccccCCCCc-cccccccccHHHHH-HHHhcCCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence            555555555555444332 3333 55555555555555 4445555556666666666666666666666666665543

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.95  E-value=4.1e-27  Score=214.37  Aligned_cols=202  Identities=24%  Similarity=0.247  Sum_probs=138.5

Q ss_pred             hHHHHHHhhhccCCC-ccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCC-
Q psy15068         37 DAFGYFLQGIINSSS-AKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGA-  114 (710)
Q Consensus        37 ~~~~~ll~~~~~~~~-~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-  114 (710)
                      ++|++|+++|++++. .|.+|.||||+||+.|+.+++++|++.|+ +++.++..+.++++.++..++.+.......... 
T Consensus         3 ~~v~~Ll~~g~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~-~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (209)
T d1ot8a_           3 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGA-DANSQDNTGRTPLHAAVAADAMGVFQILLRNRAT   81 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHTCTTC
T ss_pred             HHHHHHHHCCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHhhcc-cccccccccccccccccccccccccccccccccc
Confidence            677778887777776 47777788888887788888887777777 777777777777777777777776666555432 


Q ss_pred             CCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCC
Q psy15068        115 NVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPF  194 (710)
Q Consensus       115 ~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~  194 (710)
                      ........+.++.+.+.......+.+.|.+++++++..+..+.||++.++..+      ..++++.+++.+.+++..+. 
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~------~~~~~~~l~~~~~~~~~~d~-  154 (209)
T d1ot8a_          82 NLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVN------NTEAVNILLMHHANRDAQDD-  154 (209)
T ss_dssp             CTTCCCTTCCCHHHHHHHTTCTTHHHHHHHTTCCTTCBCTTSCBHHHHHHHTT------CHHHHHHHHHTTCCTTCCCT-
T ss_pred             ccccccccccccccccccccchhhhhhhhhhcccccccCCCCCCcchhhcccC------cceeeeeecccccccccccc-
Confidence            22334455667777777777777777777777777777777777777776666      66666666666666666655 


Q ss_pred             CCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHH
Q psy15068        195 TDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVE  247 (710)
Q Consensus       195 ~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~  247 (710)
                      .|.||||.|+..|+.+++++|+++|++++..+..+.+| |++|++.|+.++|+
T Consensus       155 ~g~TpL~~A~~~g~~~~v~~Ll~~gad~n~~d~~g~Tp-l~~A~~~~~~~iv~  206 (209)
T d1ot8a_         155 KDETPLFLAAREGSYEASKALLDNFANREITDHMDRLP-RDVASERLHHDIVR  206 (209)
T ss_dssp             TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH-HHHHHHTTCHHHHH
T ss_pred             ccccccchhccccHHHHHHHHHHCCCCCCCcCCCCCCH-HHHHHHcCCHHHHh
Confidence            66666666666666666666666666665555555554 55555555555555

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.95  E-value=1.9e-29  Score=246.67  Aligned_cols=158  Identities=12%  Similarity=0.059  Sum_probs=126.2

Q ss_pred             cchhhhhhcChhhHHHHHHhhhccCC-----------CccccchhHHHHHHhcCCHHHHHH---HHhcCCCCCccccCCC
Q psy15068         25 HHLFSEIMFSEEDAFGYFLQGIINSS-----------SAKSVELTLLCSAVWDNKIREVEF---LLSTGDHDVNEKLQDG   90 (710)
Q Consensus        25 ~~l~~a~~~~~~~~~~~ll~~~~~~~-----------~~~~~~~t~L~~A~~~g~~~~v~~---Ll~~~~~~~~~~~~~g   90 (710)
                      .+++.+...+..++.+.+...+.+++           .++..|.|||+.|+++|+.+++++   |++.|+ +++.++..|
T Consensus        48 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~-~in~~~~~g  126 (346)
T d2ajaa1          48 IHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDE-IVKVIQAEN  126 (346)
T ss_dssp             HHHCCCCSSHHHHHHHHHHHHHHHTTTTCTTHHHHHHHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCS-SCC--CHHH
T ss_pred             HHHHHHhhccHHHHHHHHHHcchhhccchhhhhhHHHhccCCCCcHHHHHHHhCCHHHHHHHHHHHhCCC-cccccCCCC
Confidence            44444555566777777766655444           445578999999999999887776   788898 999999999


Q ss_pred             CcHHHHHHHcCcHHHHHHHHHcCCCCCCCC--CCCCCHHHHHHhcCCHHHHHHHHhCCCCcc---ccccCCCchhHHhhh
Q psy15068         91 RTALYMAILQGLYKMVTLLIHHGANVNDRD--EKGYTPLHLACYLGNKNIVKFLLSKKADVR---AKCSMMVTPILAVSA  165 (710)
Q Consensus        91 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~---~~~~~~~~~l~~a~~  165 (710)
                      +||||+||+.|+.++|++|++.|++++..+  ..|.||||+|+.+||.++|++|+++|++..   ..+..+.+|++.|+.
T Consensus       127 ~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~  206 (346)
T d2ajaa1         127 YQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVG  206 (346)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHST
T ss_pred             CCHHHHHHHCCCHHHHHHHHHcCCCccccccccCCCChhHHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhh
Confidence            999999999999999999999999988765  458999999999999999999999997653   334556778888888


Q ss_pred             ccCCCCCCHHHHHHHHHHcCCCcc
Q psy15068        166 NMSEDSTDTNEIISMLIENGANVR  189 (710)
Q Consensus       166 ~~~~~~~~~~~~~~~Ll~~~~~~~  189 (710)
                      +|      +.+++++|++.|++++
T Consensus       207 ~g------~~~iv~~Ll~~ga~~~  224 (346)
T d2ajaa1         207 RG------HHNVINFLLDCPVMLA  224 (346)
T ss_dssp             TC------CHHHHHHHTTSHHHHH
T ss_pred             cC------HHHHHHHHHhCCCCcc
Confidence            99      9999999999887654

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.5e-26  Score=196.93  Aligned_cols=153  Identities=24%  Similarity=0.248  Sum_probs=101.6

Q ss_pred             hHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHH
Q psy15068         58 TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKN  137 (710)
Q Consensus        58 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~  137 (710)
                      ++||.||..|++++|++|+++|+ +++.+|..|+||||+|+ .|+.+++++|++.|++++..+..+.++++.++..++.+
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~g~-d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~~~~~~~~~~   80 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQNNV-NVNAQNGFGRTALQVMK-LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLD   80 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSCC-CTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCC-CcCccCCcccccccccc-cccccccccccccccccccccccCcccccccccccccc
Confidence            56666666666666666666666 66666666666666554 56666666666666666666666666666666666666


Q ss_pred             HHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCC-CcccCCCCCCCCHHHHHHHhCCHHHHHHHH
Q psy15068        138 IVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGA-NVREKMPFTDFSPLHFAVVKKNLSVVELLI  216 (710)
Q Consensus       138 iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~-~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll  216 (710)
                      .+++|++.+.+++..+..+.+|+++|+..+      +.+++++|++++. +.+.++. .|.||||.|+..++.+++++|+
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~------~~~~~~~Ll~~~~~~~~~~d~-~g~TpL~~A~~~~~~~iv~~Ll  153 (156)
T d1ihba_          81 TLQTLLEFQADVNIEDNEGNLPLHLAAKEG------HLRVVEFLVKHTASNVGHRNH-KGDTACDLARLYGRNEVVSLMQ  153 (156)
T ss_dssp             HHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHHSCCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccc------cccccccccccccccccccCC-CCCCHHHHHHHcCCHHHHHHHH
Confidence            666666666666666666666666666666      6666666666654 4444444 6667777777777777777776


Q ss_pred             hCC
Q psy15068        217 KCK  219 (710)
Q Consensus       217 ~~g  219 (710)
                      ++|
T Consensus       154 ~~G  156 (156)
T d1ihba_         154 ANG  156 (156)
T ss_dssp             HTC
T ss_pred             hcC
Confidence            665

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2e-26  Score=198.50  Aligned_cols=153  Identities=24%  Similarity=0.258  Sum_probs=148.3

Q ss_pred             cchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHH
Q psy15068         25 HHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYK  104 (710)
Q Consensus        25 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~  104 (710)
                      ++|+.|+..|+.++|++|+++|++++.+|..|.||||.|+ .|+.|++++|++.++ +++..+..|.++++.++..++.+
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a-~~~~~~~~~~~~l~~~~~~~~~~   80 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGA-NPDLKDRTGFAVIHDAARAGFLD   80 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHHTCHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCcCccCCcccccccccc-ccccccccccccccc-ccccccccCcccccccccccccc
Confidence            7899999999999999999999999999999999999886 799999999999999 99999999999999999999999


Q ss_pred             HHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCC-CccccccCCCchhHHhhhccCCCCCCHHHHHHHHHH
Q psy15068        105 MVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKA-DVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIE  183 (710)
Q Consensus       105 ~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~-~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~  183 (710)
                      +++.|++.+.+++..+..|.+||++|+..++.+++++|+++++ +++.++..|.||||+|+..+      +.+++++|++
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~------~~~iv~~Ll~  154 (156)
T d1ihba_          81 TLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYG------RNEVVSLMQA  154 (156)
T ss_dssp             HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccCCCCCCHHHHHHHcC------CHHHHHHHHh
Confidence            9999999999999999999999999999999999999999986 78999999999999999999      9999999999


Q ss_pred             cC
Q psy15068        184 NG  185 (710)
Q Consensus       184 ~~  185 (710)
                      +|
T Consensus       155 ~G  156 (156)
T d1ihba_         155 NG  156 (156)
T ss_dssp             TC
T ss_pred             cC
Confidence            87

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.1e-26  Score=194.66  Aligned_cols=152  Identities=23%  Similarity=0.293  Sum_probs=93.5

Q ss_pred             hHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHH
Q psy15068         58 TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKN  137 (710)
Q Consensus        58 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~  137 (710)
                      +.|+.||..|+.++|++|++.+..+++.+|..|+||||+|+ .|+.+++++|++++++++..+..|.+|+++|+..++.+
T Consensus         4 ~~L~~Aa~~g~~~~vk~lL~~~~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~~~~~~   82 (156)
T d1bd8a_           4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLD   82 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHhCCCCCCccCCCCCccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence            34666666666666666665533366666666666666554 35556666666666666666666666666666666666


Q ss_pred             HHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHh
Q psy15068        138 IVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIK  217 (710)
Q Consensus       138 iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~  217 (710)
                      ++++++++|++++.++..+.||||+|+..+      +.+++++|+ .|++++.++. .|.|||++|+..|+.+++++|++
T Consensus        83 ~~~~~l~~~~~~n~~~~~~~t~L~~A~~~~------~~~i~~~L~-~~~~~~~~d~-~G~TpL~~A~~~g~~~iv~~Ll~  154 (156)
T d1bd8a_          83 TLKVLVEHGADVNVPDGTGALPIHLAVQEG------HTAVVSFLA-AESDLHRRDA-RGLTPLELALQRGAQDLVDILQG  154 (156)
T ss_dssp             HHHHHHHTTCCSCCCCTTSCCHHHHHHHHT------CHHHHHHHH-TTSCTTCCCT-TSCCHHHHHHHSCCHHHHHHHHT
T ss_pred             ccccccccccccccccCCCCeeeccccccc------ccccccccc-ccccccccCC-CCCCHHHHHHHcCCHHHHHHHHh
Confidence            666666666666666666666666666666      666666555 4556655555 66666666666666666666665


Q ss_pred             C
Q psy15068        218 C  218 (710)
Q Consensus       218 ~  218 (710)
                      +
T Consensus       155 h  155 (156)
T d1bd8a_         155 H  155 (156)
T ss_dssp             T
T ss_pred             h
Confidence            3

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.5e-25  Score=192.19  Aligned_cols=151  Identities=21%  Similarity=0.286  Sum_probs=142.8

Q ss_pred             cchhhhhhcChhhHHHHHHhh-hccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcH
Q psy15068         25 HHLFSEIMFSEEDAFGYFLQG-IINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLY  103 (710)
Q Consensus        25 ~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~  103 (710)
                      +.|+.|+..|+.++|++|+++ +++++..|..|+||||.|+ .|+.+++++|++++. +++..+..|.+|+++|+..++.
T Consensus         4 ~~L~~Aa~~g~~~~vk~lL~~~~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~-~~~~~~~~~~~~l~~~~~~~~~   81 (156)
T d1bd8a_           4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGA-SPNVQDTSGTSPVHDAARTGFL   81 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSC-TTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCH
T ss_pred             HHHHHHHHcCCHHHHHHHHHhCCCCCCccCCCCCccccccc-ccccccccccccccc-cccccccccccccccccccccc
Confidence            459999999999999999985 7899999999999999887 588999999999999 9999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHH
Q psy15068        104 KMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIE  183 (710)
Q Consensus       104 ~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~  183 (710)
                      ++++++++.|++++.+|..|.||||+|+..|+.+++++|+ .|++++.++..|.|||++|+..+      +.+++++|++
T Consensus        82 ~~~~~~l~~~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~~d~~G~TpL~~A~~~g------~~~iv~~Ll~  154 (156)
T d1bd8a_          82 DTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLTPLELALQRG------AQDLVDILQG  154 (156)
T ss_dssp             HHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTCCCTTSCCHHHHHHHSC------CHHHHHHHHT
T ss_pred             cccccccccccccccccCCCCeeecccccccccccccccc-ccccccccCCCCCCHHHHHHHcC------CHHHHHHHHh
Confidence            9999999999999999999999999999999999999887 68999999999999999999999      9999999987


Q ss_pred             c
Q psy15068        184 N  184 (710)
Q Consensus       184 ~  184 (710)
                      +
T Consensus       155 h  155 (156)
T d1bd8a_         155 H  155 (156)
T ss_dssp             T
T ss_pred             h
Confidence            5

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.93  E-value=5.3e-28  Score=236.40  Aligned_cols=233  Identities=15%  Similarity=0.061  Sum_probs=163.1

Q ss_pred             ccccccccchhhhhhcChhhHHHH---HHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCcccc--CCCCc
Q psy15068         18 KESSYRHHHLFSEIMFSEEDAFGY---FLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKL--QDGRT   92 (710)
Q Consensus        18 ~~~~~~~~~l~~a~~~~~~~~~~~---ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~--~~g~t   92 (710)
                      .++..+.|+|+.|+..|+.+++++   |++.|++++..|..|+||||.||+.|+.++|++|++.|+ +++..+  ..|+|
T Consensus        85 ~~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~-~~~~~~~~~~g~t  163 (346)
T d2ajaa1          85 KKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAP-TEIMAMIQAENYH  163 (346)
T ss_dssp             HHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCT-TTHHHHHSHHHHH
T ss_pred             hccCCCCcHHHHHHHhCCHHHHHHHHHHHhCCCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCC-CccccccccCCCC
Confidence            456678899999999999887766   789999999999999999999999999999999999999 888876  46999


Q ss_pred             HHHHHHHcCcHHHHHHHHHcCCCCC---CCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCC
Q psy15068         93 ALYMAILQGLYKMVTLLIHHGANVN---DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSE  169 (710)
Q Consensus        93 ~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~  169 (710)
                      |||+||..|+.++|++|++.|++..   ..+..+.||++.|+.+|+.++|++|+++|++++..+..       +...+  
T Consensus       164 ~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~-------~~~~~--  234 (346)
T d2ajaa1         164 AFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIH-------EFEYG--  234 (346)
T ss_dssp             HHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHHHHHC-------TTTTT--
T ss_pred             hhHHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHhCCCCcchHHHH-------HHHcC--
Confidence            9999999999999999999987653   33455678888899999999999999999887643322       22222  


Q ss_pred             CCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCC--cc-------hhhccCCChhHHHHHhc
Q psy15068        170 DSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKAD--TN-------LIVKVNQEPLLFFAIES  240 (710)
Q Consensus       170 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~--~~-------~~~~~~~~~~l~~A~~~  240 (710)
                          +..+..++.                    +...+..+....+.....+  .+       .......++ ++.|+..
T Consensus       235 ----~~~~~~~~~--------------------~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~-l~~a~~~  289 (346)
T d2ajaa1         235 ----EKYVNPFIA--------------------RHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRN-LIRRNDE  289 (346)
T ss_dssp             ----TTTHHHHHH--------------------HHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHH-HHHHCCG
T ss_pred             ----cHhhhHHHH--------------------HhhccchHHHHHHHHhcccccHhHHhcccccccchhhhH-HHHHhcC
Confidence                222222221                    1111111111111111000  00       000111223 7788888


Q ss_pred             CcHHHHHHHHccCCCc-----cccCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy15068        241 NSVKIVEAFLNSKNFD-----VSISDGDLNSLLHKACHVGNLQIVQMLVKR  286 (710)
Q Consensus       241 ~~~~~v~~lL~~~~~~-----~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~  286 (710)
                      ++.++++ +|.+.+..     ....+.+|+||||+|++.|+.++|++|++.
T Consensus       290 ~~ld~v~-~Ll~~~~~~~~~~~~~~~~~g~T~LhlA~~~Gn~e~v~lLL~~  339 (346)
T d2ajaa1         290 VLLDDIR-FLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSI  339 (346)
T ss_dssp             GGHHHHH-HHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTS
T ss_pred             ChHHHHH-HHHhCcChhhhcccccCCCCCCcHHHHHHHcCcHHHHHHHhCC
Confidence            8888888 44444332     334456788999999999999999999874

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=4.9e-25  Score=188.92  Aligned_cols=141  Identities=23%  Similarity=0.274  Sum_probs=76.6

Q ss_pred             cchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHH
Q psy15068         25 HHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYK  104 (710)
Q Consensus        25 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~  104 (710)
                      |||+.|++.|+.++|++|+++|++++ .|..|.||||+|+..++.++++.++.... .....+..+.++++.++...+.+
T Consensus         4 t~L~~Aa~~g~~~~v~~LL~~ga~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   81 (153)
T d1awcb_           4 KKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGV-SRDARTKVDRTPLHMAASEGHAN   81 (153)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTC-CTTCCCTTCCCHHHHHHHHTCHH
T ss_pred             HHHHHHHHCCCHHHHHHHHHcCCCcc-cccCCCccccccccccccccccccccccc-cccccccccccccccccccccce
Confidence            45555555555555555555555444 35555555555555555555555555554 44444444555555555555555


Q ss_pred             HHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhcc
Q psy15068        105 MVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANM  167 (710)
Q Consensus       105 ~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~  167 (710)
                      +++++++.|++++.+|..|.||||+|+..|+.++|++|+++|++++.++..|.|||++|+..|
T Consensus        82 ~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~~g~Tpl~~A~~~g  144 (153)
T d1awcb_          82 IVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNG  144 (153)
T ss_dssp             HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             eeecccccCCccccccccCchHHHhhhhcchhheeeeccccccCCcccCCCCCCHHHHHHHcC
Confidence            555555555555555555555555555555555555555555555555555555555555555

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=1.6e-24  Score=185.64  Aligned_cols=151  Identities=26%  Similarity=0.341  Sum_probs=139.6

Q ss_pred             chhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCC
Q psy15068         56 ELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGN  135 (710)
Q Consensus        56 ~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~  135 (710)
                      ..|||+.|++.|+.++|++|+++|+ +++ .|..|+||||+|+..++.++++.++.........+..+.++++.++...+
T Consensus         2 ~~t~L~~Aa~~g~~~~v~~LL~~ga-~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (153)
T d1awcb_           2 LGKKLLEAARAGQDDEVRILMANGA-PFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGH   79 (153)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHHTC-CCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred             CCHHHHHHHHCCCHHHHHHHHHcCC-Ccc-cccCCCcccccccccccccccccccccccccccccccccccccccccccc
Confidence            3599999999999999999999999 777 68999999999999999999999999988888888888999999999999


Q ss_pred             HHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHH
Q psy15068        136 KNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELL  215 (710)
Q Consensus       136 ~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~L  215 (710)
                      .++++++.++|++.+.++..|.|||++|+..+      +.+++++|++.|++++..+. .|.|||++|+.+|+.+++++|
T Consensus        80 ~~~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g------~~~iv~~ll~~gad~~~~d~-~g~Tpl~~A~~~g~~eiv~lL  152 (153)
T d1awcb_          80 ANIVEVLLKHGADVNAKDMLKMTALHWATEHN------HQEVVELLIKYGADVHTQSK-FCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHH
T ss_pred             ceeeecccccCCccccccccCchHHHhhhhcc------hhheeeeccccccCCcccCC-CCCCHHHHHHHcCCHHHHHhC
Confidence            99999999999999999999999999999999      99999999999999988877 899999999999999999876

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=1e-25  Score=181.45  Aligned_cols=114  Identities=22%  Similarity=0.161  Sum_probs=106.5

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCC
Q psy15068        552 GSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKN  631 (710)
Q Consensus       552 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~  631 (710)
                      .|||++|++.|+.+++++|+++|++++.+|..|+||||+|+.. ++.+++++|+++|++++.++ ..|+||||+|+..|+
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~-~~~~~~~~ll~~g~din~~d-~~g~tpLh~A~~~~~   80 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADC-GQLEILEFLLLKGADINAPD-KHHITPLLSAVYEGH   80 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHH-STTTHHHHHHHSSCTTTCCS-SSCSCHHHHHHTTTC
T ss_pred             ChHHHHHHHCCCHHHHHHHHHhhhccccccccccccccccccc-cccccccccccccceeeecc-cccccchhhhhhcCc
Confidence            3899999999999999999999999999999999999999999 99999999999999999999 999999999999999


Q ss_pred             hhHHHHHHhhhhccccCCCCCCCchhhHHHHhhhcccc
Q psy15068        632 RDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNSAKQL  669 (710)
Q Consensus       632 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~~~~L  669 (710)
                      .+++++|+++|+|++.+|..|+||| |+|.. ..++.|
T Consensus        81 ~~~v~~Ll~~Gad~~~~d~~G~t~l-~~a~~-~~i~~L  116 (118)
T d1myoa_          81 VSCVKLLLSKGADKTVKGPDGLTAL-EATDN-QAIKAL  116 (118)
T ss_dssp             CHHHHHHHTTCCCSSSSSSSTCCCC-CTCSS-TTTGGG
T ss_pred             hhhhhhhhcccccceeeCCCCCCHH-HHHhH-HHHHHh
Confidence            9999999999999999999999999 99842 125555

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=6.7e-25  Score=178.83  Aligned_cols=119  Identities=20%  Similarity=0.240  Sum_probs=84.9

Q ss_pred             ccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCC-cHHHHHHHcCc
Q psy15068         24 HHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGR-TALYMAILQGL  102 (710)
Q Consensus        24 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~-t~L~~A~~~g~  102 (710)
                      .++|+.|+..|+.++|++|+++|++++.++..|.||||.|+ .|+.+++++|+++|+ +++.++..+. ||||+|++.|+
T Consensus         4 ~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga-~~~~~~~~~~~~~L~~A~~~g~   81 (125)
T d1bi7b_           4 ADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGA-EPNCADPATLTRPVHDAAREGF   81 (125)
T ss_dssp             TTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTC-CCCCCCTTTCCCHHHHHHHHTC
T ss_pred             hhHHHHHHHCCCHHHHHHHHHcCCccccccccccccccccc-ccccccccccccccc-cccccccccccccccccccccc
Confidence            35677777777777777777777777777777777777553 567777777777777 7777666654 47777777777


Q ss_pred             HHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHh
Q psy15068        103 YKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLS  144 (710)
Q Consensus       103 ~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~  144 (710)
                      .+++++|+++|++++.+|..|.||||+|+.+|+.+++++|++
T Consensus        82 ~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          82 LDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             HHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             ccccccccccccccccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            777777777777777777777777777777777777777654

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.7e-24  Score=176.36  Aligned_cols=120  Identities=22%  Similarity=0.252  Sum_probs=108.2

Q ss_pred             chhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCC-CHHHHHHhcC
Q psy15068         56 ELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGY-TPLHLACYLG  134 (710)
Q Consensus        56 ~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~-t~L~~A~~~g  134 (710)
                      +.++||.|+..|++++|++|+++|+ +++.++..|.||+|+|+ .|+.+++++|+++|++++..+..+. ||||+|+..|
T Consensus         3 ~~~~L~~Aa~~G~~~~v~~Ll~~ga-d~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~~g   80 (125)
T d1bi7b_           3 SADWLATAAARGRVEEVRALLEAGA-NPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREG   80 (125)
T ss_dssp             STTHHHHHHHHTCHHHHHHHHTTTC-CTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHT
T ss_pred             ChhHHHHHHHCCCHHHHHHHHHcCC-ccccccccccccccccc-cccccccccccccccccccccccccccccccccccc
Confidence            4589999999999999999999998 99999999999999765 6899999999999999999988875 6999999999


Q ss_pred             CHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHH
Q psy15068        135 NKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIE  183 (710)
Q Consensus       135 ~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~  183 (710)
                      +.+++++|+++|++++.+|..|.|||++|+..|      +.+++++|++
T Consensus        81 ~~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g------~~~~v~~Lls  123 (125)
T d1bi7b_          81 FLDTLVVLHRAGARLDVRDAWGRLPVDLAEELG------HRDVARYLRA  123 (125)
T ss_dssp             CHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHT------CHHHHHHHSS
T ss_pred             cccccccccccccccccccCCCCCHHHHHHHcC------CHHHHHHHHh
Confidence            999999999999999999998899888888888      8888888764

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=1.9e-24  Score=173.82  Aligned_cols=107  Identities=33%  Similarity=0.411  Sum_probs=99.2

Q ss_pred             hhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCH
Q psy15068         57 LTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNK  136 (710)
Q Consensus        57 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~  136 (710)
                      .|||++|++.|+.++|++|+++|+ +++.++..|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.+|+.
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~g~-d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~~~~   81 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAKGE-DVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHV   81 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTTTC-CCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTTTCC
T ss_pred             ChHHHHHHHCCCHHHHHHHHHhhh-ccccccccccccccccccccccccccccccccceeeecccccccchhhhhhcCch
Confidence            489999999999999999999998 9999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCccccccCCCchhHHhh
Q psy15068        137 NIVKFLLSKKADVRAKCSMMVTPILAVS  164 (710)
Q Consensus       137 ~iv~~Ll~~g~~~~~~~~~~~~~l~~a~  164 (710)
                      ++|++|+++|++++.+|..|.|||++|.
T Consensus        82 ~~v~~Ll~~Gad~~~~d~~G~t~l~~a~  109 (118)
T d1myoa_          82 SCVKLLLSKGADKTVKGPDGLTALEATD  109 (118)
T ss_dssp             HHHHHHHTTCCCSSSSSSSTCCCCCTCS
T ss_pred             hhhhhhhcccccceeeCCCCCCHHHHHh
Confidence            9999999999999999999999998874

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=1.1e-24  Score=209.08  Aligned_cols=149  Identities=15%  Similarity=0.173  Sum_probs=121.9

Q ss_pred             HHhcCCccccc-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCc-------hHHHHHHHHcC
Q psy15068        537 NIEDGACVNVS-SERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSN-------DNIVRKLLHHG  608 (710)
Q Consensus       537 ll~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-------~~~v~~Ll~~g  608 (710)
                      +...+.++|.. |.+|+||||+||..|+.++|++|+++|++++.+|..|+||||.|+.. ++       .+++++|.   
T Consensus        92 ~~~~~~dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~-~~~~~~~~~~~ll~~l~---  167 (301)
T d1sw6a_          92 FPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKS-VNNYDSGTFEALLDYLY---  167 (301)
T ss_dssp             CTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHS-SHHHHTTCHHHHHHHHG---
T ss_pred             CCccCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcCCcccccHHHHhhhc-ccchhhhhHHHHHHHHh---
Confidence            33457788866 89999999999999999999999999999999999999999999986 54       24444443   


Q ss_pred             CCCCCCCCCCCCCHhHHHHhCCC----hhH--------HHHHHhhhh---------------------------------
Q psy15068        609 AYYDMKDGKTGKTPLKHAEAGKN----RDI--------IDLLHLIDN---------------------------------  643 (710)
Q Consensus       609 ~~~~~~~~~~g~t~L~~A~~~~~----~~~--------v~~Ll~~g~---------------------------------  643 (710)
                      ..+...+ ..|+||||.++..+.    ..+        +.++++.+.                                 
T Consensus       168 ~~~~~~d-~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (301)
T d1sw6a_         168 PCLILED-SMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKW  246 (301)
T ss_dssp             GGGGEEC-TTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHH
T ss_pred             hhhhhcc-cccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHH
Confidence            3456667 889999998885443    222        233333322                                 


Q ss_pred             ----ccccCCCCCCCchhhHHHHhhh---cccccceeehhHHHHhhhcccchhHHHHh
Q psy15068        644 ----LFASVTNPYDPNVYHRIELMNS---AKQLGLVHVFEIMKVVKNYAGETLIGVAR  694 (710)
Q Consensus       644 ----~~~~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~~~~~~~~~~~G~t~l~~a~  694 (710)
                          .+|.+|..|+||| |+|++.|+   +++| +++|||+  +++|+.|.|||++|+
T Consensus       247 ~~~~~in~~D~~G~TpL-h~A~~~g~~~iv~~L-l~~GAd~--~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         247 IIANMLNAQDSNGDTCL-NIAARLGNISIVDAL-LDYGADP--FIANKSGLRPVDFGA  300 (301)
T ss_dssp             HHHHTTTCCCTTSCCHH-HHHHHHCCHHHHHHH-HHTTCCT--TCCCTTSCCGGGGTC
T ss_pred             HHhcCccCCCCCCCCHH-HHHHHcCCHHHHHHH-HHCCCCC--CCCCCCCCCHHHHcC
Confidence                2789999999999 99999999   9999 9999999  999999999999996

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.1e-23  Score=172.66  Aligned_cols=119  Identities=29%  Similarity=0.333  Sum_probs=72.5

Q ss_pred             hHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHH
Q psy15068         58 TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKN  137 (710)
Q Consensus        58 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~  137 (710)
                      ++|+.|+..|+.++|++|+++|+ +++.+|..|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.+|+.+
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~-d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~g~~~   81 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVD-DPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQ   81 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTS-SCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCC-CccccccccccccccccccccccccccccccccccccccccCcccccccchhhHHH
Confidence            45666666666666666666666 66666666666666666666666666666666666666666666666666666666


Q ss_pred             HHHHHHhCCCCcccccc-CCCchhHHh--hhccCCCCCCHHHHHHHHHH
Q psy15068        138 IVKFLLSKKADVRAKCS-MMVTPILAV--SANMSEDSTDTNEIISMLIE  183 (710)
Q Consensus       138 iv~~Ll~~g~~~~~~~~-~~~~~l~~a--~~~~~~~~~~~~~~~~~Ll~  183 (710)
                      +|++|+++|++++..+. .+.+|+.++  ...|      +.+++++|++
T Consensus        82 ~v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g------~~eiv~~L~~  124 (130)
T d1ycsb1          82 VCKFLVESGAAVFAMTYSDMQTAADKCEEMEEG------YTQCSQFLYG  124 (130)
T ss_dssp             HHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTT------CCCHHHHHHH
T ss_pred             HHHHHHHcCCCcccccCCCCCCHHHHHHHHHcC------hHHHHHHHHh
Confidence            66666666666665443 345554433  2333      4555555553

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.4e-23  Score=170.64  Aligned_cols=119  Identities=20%  Similarity=0.211  Sum_probs=99.3

Q ss_pred             hhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHH
Q psy15068        525 NVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKL  604 (710)
Q Consensus       525 ~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~L  604 (710)
                      ++..++.+++++|+++|+++|.++.+|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+.+ |+.+++++|
T Consensus         8 A~~~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~-g~~~~v~~L   86 (130)
T d1ycsb1           8 SSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASC-NNVQVCKFL   86 (130)
T ss_dssp             HHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHT-TCHHHHHHH
T ss_pred             HHHcCCHHHHHHHHHcCCCccccccccccccccccccccccccccccccccccccccccCcccccccchh-hHHHHHHHH
Confidence            3888888888888888888888888888888888888888888888888888888888888888888888 888888888


Q ss_pred             HHcCCCCCCCCCCCCCCHhHHH--HhCCChhHHHHHHhhhhc
Q psy15068        605 LHHGAYYDMKDGKTGKTPLKHA--EAGKNRDIIDLLHLIDNL  644 (710)
Q Consensus       605 l~~g~~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~g~~  644 (710)
                      +++|++++..+...|.||++++  ...|+.+++++|++.+.+
T Consensus        87 l~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~~~~  128 (130)
T d1ycsb1          87 VESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEK  128 (130)
T ss_dssp             HHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHH
T ss_pred             HHcCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHhHHHh
Confidence            8888888877756688887665  466788888888876543

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=6.2e-24  Score=203.80  Aligned_cols=193  Identities=18%  Similarity=0.109  Sum_probs=123.1

Q ss_pred             CCccc-cCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCH-------HHHHHHHhCCCCccccc
Q psy15068         82 DVNEK-LQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNK-------NIVKFLLSKKADVRAKC  153 (710)
Q Consensus        82 ~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~-------~iv~~Ll~~g~~~~~~~  153 (710)
                      ++|.. |..|+||||+||..|+.++|++|+++|++++.+|..|+||||+||..++.       ++++++.+   .+...+
T Consensus        98 dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~---~~~~~d  174 (301)
T d1sw6a_          98 NLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP---CLILED  174 (301)
T ss_dssp             CSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGG---GGGEEC
T ss_pred             CcCcCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcCCcccccHHHHhhhcccchhhhhHHHHHHHHhh---hhhhcc
Confidence            67755 88899999999999999999999999999999999999999999986652       44454433   455667


Q ss_pred             cCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChh
Q psy15068        154 SMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPL  233 (710)
Q Consensus       154 ~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~  233 (710)
                      ..|+||||+++..+....  ...++++.                          ...++.++...+..............
T Consensus       175 ~~g~t~lh~~~~~~~~~~--~~~~~~~~--------------------------~~~~~~~l~~~~~~~~~~~~~~~~~~  226 (301)
T d1sw6a_         175 SMNRTILHHIIITSGMTG--CSAAAKYY--------------------------LDILMGWIVKKQNRPIQSGTNEKESK  226 (301)
T ss_dssp             TTCCCHHHHHHHHHTSTT--CHHHHHHH--------------------------HHHHHHHHHHGGGCCEEEC-------
T ss_pred             cccCCHHHHHHHHhCccc--cHHHHHHH--------------------------HHHHHHHHHhcCCcchhcccccccch
Confidence            778888887775542110  11222111                          11234444444433322222211111


Q ss_pred             HHHHHhcCcHHHHHHHHcc--CCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHH
Q psy15068        234 LFFAIESNSVKIVEAFLNS--KNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAI  305 (710)
Q Consensus       234 l~~A~~~~~~~~v~~lL~~--~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~  305 (710)
                      ++.+........+..+...  .+..++..|..|+||||+|++.|+.++|++|+++|++++..+..|.|||++|+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         227 PNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA  300 (301)
T ss_dssp             ---------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTC
T ss_pred             hHHHHhcchHHHHHHHhhHHHHhcCccCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHcC
Confidence            3333322222222211100  01136788999999999999999999999999999999999999999999985

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=4.2e-22  Score=167.17  Aligned_cols=121  Identities=24%  Similarity=0.315  Sum_probs=111.0

Q ss_pred             HHHhhhcCchHHHHHHHhcCCccccc------CCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCCcHHHHHH
Q psy15068        522 FLKNVRSNKYDEVKKNIEDGACVNVS------SERRGSALIYVAWK---GYEEIVDLLLDNGADVNFKSATGFTALHMAC  592 (710)
Q Consensus       522 ~~~~~~~~~~~~~~~ll~~~~~~~~~------~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~  592 (710)
                      ++.+++.+++..+..++..|.+++..      +..|+||||+|+..   ++.+++++|+++|++++.+|..|+||||+|+
T Consensus        10 L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g~TpLh~A~   89 (154)
T d1dcqa1          10 LCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCC   89 (154)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHH
T ss_pred             HHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCChhhhhhhhcccccccc
Confidence            35558899999999999999887755      67799999999975   6789999999999999999999999999999


Q ss_pred             hcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhc
Q psy15068        593 RFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNL  644 (710)
Q Consensus       593 ~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~  644 (710)
                      .. |+.+++++|+++|++++.++ ..|+||||+|+..|+.+++++|++.++.
T Consensus        90 ~~-~~~~~v~~Ll~~gad~~~~d-~~g~tpL~~A~~~~~~~i~~~L~~~~~~  139 (154)
T d1dcqa1          90 LT-DNAECLKLLLRGKASIEIAN-ESGETPLDIAKRLKHEHCEELLTQALSG  139 (154)
T ss_dssp             HT-TCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred             cc-ccccccccccccCccccccC-CCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence            99 99999999999999999999 9999999999999999999999998764

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=2e-22  Score=169.19  Aligned_cols=123  Identities=20%  Similarity=0.241  Sum_probs=89.4

Q ss_pred             ccchhhhhhcChhhHHHHHHhhhccCCCc------cccchhHHHHHHhc---CCHHHHHHHHhcCCCCCccccCCCCcHH
Q psy15068         24 HHHLFSEIMFSEEDAFGYFLQGIINSSSA------KSVELTLLCSAVWD---NKIREVEFLLSTGDHDVNEKLQDGRTAL   94 (710)
Q Consensus        24 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~------~~~~~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~g~t~L   94 (710)
                      .+.|..|++.+++..+..++..|.+++..      +..|+||||+|++.   |+.++|++|+++|+ +++.+|..|+|||
T Consensus         7 l~~L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~ga-din~~d~~g~TpL   85 (154)
T d1dcqa1           7 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSG-NLDKQTGKGSTAL   85 (154)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCS-CTTCCCTTCCCHH
T ss_pred             HHHHHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCC-Chhhhhhhhcccc
Confidence            34567777777777777777777665544      55677777777763   56777777777777 7777777777777


Q ss_pred             HHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCC
Q psy15068         95 YMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKA  147 (710)
Q Consensus        95 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~  147 (710)
                      |+|++.|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++.++
T Consensus        86 h~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~  138 (154)
T d1dcqa1          86 HYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALS  138 (154)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred             ccccccccccccccccccCccccccCCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence            77777777777777777777777777777777777777777777777777544