Psyllid ID: psy1510

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210------
RITPLGPSCVDSSTTVLYPYLTRGLSIYFQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVANIWTDHWVYWAGPSLGGLVAGLLYTYLFVAPSIGEYSPVLVEDKEEGK
ccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHEEcccccccccccHHHHHHHHHHHHHHcccccccccccccHHHHHHHHccccccEEEEHHHHHHHHHHHHHHHHHHcccccccccccccccccccc
cccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccccHHHccccccccccccc
ritplgpscvdssttvlypyltRGLSIYFQAlghvsgghfnpaVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLilkaltpadfqgnlglttlnkhltpvqgmGIEFFLGFVLVLVIFGvcdgnkphakapAALAIGLTVALGHLaavdftgasmnpartFGSAVVANIWTDHwvywagpslggLVAGLLYTYLFvapsigeyspvlvedkeegk
ritplgpscvdssTTVLYPYLTRGLSIYFQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVANIWTDHWVYWAGPSLGGLVAGLLYTYLFVAPSigeyspvlvedkeegk
RITPLGPSCVDSSTTVLYPYLTRGLSIYFQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMgiefflgfvlvlvifgvCDGNKPHAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVANIWTDHWVYWAGPSLGGLVAGLLYTYLFVAPSIGEYSPVLVEDKEEGK
*********VDSSTTVLYPYLTRGLSIYFQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVANIWTDHWVYWAGPSLGGLVAGLLYTYLFVAPSIGEYSPVL********
*********VDSSTTVLYPYLTRGLSIYFQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVANIWTDHWVYWAGPSLGGLVAGLLYTYLFVA******************
RITPLGPSCVDSSTTVLYPYLTRGLSIYFQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVANIWTDHWVYWAGPSLGGLVAGLLYTYLFVAPSIGEYSPVLVEDKEEGK
******P*CVDSSTTVLYPYLTRGLSIYFQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVANIWTDHWVYWAGPSLGGLVAGLLYTYLFVAPS****************
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
oooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooHHHHHHHHHHHHHHHHiiiRRRRRRRRRRRRRRRRRRRiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHoooRRRRRRRRRRRRRRRooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
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RITPLGPSCVDSSTTVLYPYLTRGLSIYFQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVANIWTDHWVYWAGPSLGGLVAGLLYTYLFVAPSIGEYSPVLVEDKEEGK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query216 2.2.26 [Sep-21-2011]
Q9NHW7249 Aquaporin AQPAe.a OS=Aede N/A N/A 0.773 0.670 0.532 1e-48
Q23808255 Aquaporin AQPcic OS=Cicad N/A N/A 0.805 0.682 0.502 7e-47
P55088323 Aquaporin-4 OS=Mus muscul yes N/A 0.814 0.544 0.511 1e-46
Q7PWV1250 Aquaporin AQPAn.G OS=Anop no N/A 0.861 0.744 0.510 2e-46
Q5I4F9326 Aquaporin-4 OS=Notomys al N/A N/A 0.814 0.539 0.511 2e-46
P47863323 Aquaporin-4 OS=Rattus nor yes N/A 0.814 0.544 0.511 3e-46
Q923J4324 Aquaporin-4 OS=Dipodomys N/A N/A 0.814 0.543 0.511 1e-45
O77750323 Aquaporin-4 OS=Bos taurus yes N/A 0.814 0.544 0.5 2e-45
P55087323 Aquaporin-4 OS=Homo sapie yes N/A 0.814 0.544 0.505 3e-45
Q25074251 Aquaporin OS=Haematobia i N/A N/A 0.773 0.665 0.505 8e-44
>sp|Q9NHW7|AQP_AEDAE Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2 Back     alignment and function desciption
 Score =  192 bits (488), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 89/167 (53%), Positives = 121/167 (72%)

Query: 30  QALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPADFQGNL 89
           QA GHVSG H NPAVT+G++ T  +SI++  FY+V+QC+GAI+G+ ++KA TP+D  G L
Sbjct: 71  QAFGHVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPSDVIGGL 130

Query: 90  GLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHLAAV 149
           G+T ++  LT  QG+ IE  + F+LV V+ GVCD  +   K  A LAIGL++  GHL+A+
Sbjct: 131 GVTGIDPRLTAGQGVMIEALITFILVFVVHGVCDNRRSDIKGSAPLAIGLSITAGHLSAI 190

Query: 150 DFTGASMNPARTFGSAVVANIWTDHWVYWAGPSLGGLVAGLLYTYLF 196
            +TGASMNPAR+FG AVV   WTD WVYW GP +GG++AG +Y   F
Sbjct: 191 KYTGASMNPARSFGPAVVMGNWTDQWVYWVGPIVGGILAGAVYRLFF 237
Forms a water-specific channel.
Aedes aegypti (taxid: 7159)
>sp|Q23808|AQP_CICVR Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1 Back     alignment and function description
>sp|P55088|AQP4_MOUSE Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2 Back     alignment and function description
>sp|Q7PWV1|AQP_ANOGA Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4 Back     alignment and function description
>sp|Q5I4F9|AQP4_NOTAL Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1 Back     alignment and function description
>sp|P47863|AQP4_RAT Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1 Back     alignment and function description
>sp|Q923J4|AQP4_DIPME Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1 Back     alignment and function description
>sp|O77750|AQP4_BOVIN Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3 Back     alignment and function description
>sp|P55087|AQP4_HUMAN Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2 Back     alignment and function description
>sp|Q25074|AQP_HAEIX Aquaporin OS=Haematobia irritans exigua PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query216
242018018263 Aquaporin AQPcic, putative [Pediculus hu 0.939 0.771 0.595 2e-65
91078198266 PREDICTED: similar to aquaporin [Triboli 0.907 0.736 0.584 3e-60
237648968270 aquaporin [Bombyx mori] gi|225320705|dbj 0.939 0.751 0.557 2e-58
358633438277 aquaporin [Blattella germanica] 0.995 0.776 0.527 3e-58
157136837264 aquaporin [Aedes aegypti] gi|94468982|gb 0.953 0.780 0.525 1e-57
170060272236 aquaporin [Culex quinquefasciatus] gi|16 0.953 0.872 0.530 4e-57
312380358229 hypothetical protein AND_07614 [Anophele 0.888 0.838 0.571 5e-56
321463633266 hypothetical protein DAPPUDRAFT_199790 [ 0.907 0.736 0.541 8e-55
195430708264 GK21417 [Drosophila willistoni] gi|19415 0.847 0.693 0.548 1e-53
158299456270 AGAP008843-PA [Anopheles gambiae str. PE 0.893 0.714 0.565 5e-52
>gi|242018018|ref|XP_002429480.1| Aquaporin AQPcic, putative [Pediculus humanus corporis] gi|212514414|gb|EEB16742.1| Aquaporin AQPcic, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 125/210 (59%), Positives = 157/210 (74%), Gaps = 7/210 (3%)

Query: 11  DSSTTVLYPYLTRGLSIY--FQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCI 68
           D  T ++   LT GL I+   QA  HVSG H NPAVT+ +L TGK+ II+++FYV+ QC+
Sbjct: 51  DDVTDLVRISLTFGLVIFGAVQAFCHVSGAHLNPAVTIAVLVTGKIPIIKSLFYVIVQCL 110

Query: 69  GAISGSLILKALTPAD--FQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNK 126
           G+++GS +LKALTP D   QG LGLT +N  L+PVQG G+EFFLGFVLV+V+FGVCD N+
Sbjct: 111 GSVAGSAVLKALTPDDPTVQGTLGLTAVNPKLSPVQGFGVEFFLGFVLVMVVFGVCDSNR 170

Query: 127 PHAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVANIWTDHWVYWAGPSLGGL 186
                PA LAIGLTV +GHLA ++ TG+SMNPARTFGSAV+ANIWT+HWVYW GP LGG+
Sbjct: 171 KSVDIPAPLAIGLTVGMGHLATIELTGSSMNPARTFGSAVIANIWTNHWVYWLGPILGGI 230

Query: 187 VAGLLYTYLFVAP---SIGEYSPVLVEDKE 213
            A L+Y + F AP    + EYSPV  E+KE
Sbjct: 231 AAALIYHHTFSAPPLDEVTEYSPVRAEEKE 260

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|91078198|ref|XP_968342.1| PREDICTED: similar to aquaporin [Tribolium castaneum] gi|270002357|gb|EEZ98804.1| hypothetical protein TcasGA2_TC001374 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|237648968|ref|NP_001153661.1| aquaporin [Bombyx mori] gi|225320705|dbj|BAH29748.1| aquaporin AQP-Bom3 [Bombyx mori] Back     alignment and taxonomy information
>gi|358633438|emb|CBY77924.1| aquaporin [Blattella germanica] Back     alignment and taxonomy information
>gi|157136837|ref|XP_001656932.1| aquaporin [Aedes aegypti] gi|94468982|gb|ABF18340.1| aquaporin 2 [Aedes aegypti] gi|108880961|gb|EAT45186.1| AAEL003550-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|170060272|ref|XP_001865728.1| aquaporin [Culex quinquefasciatus] gi|167878792|gb|EDS42175.1| aquaporin [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|312380358|gb|EFR26376.1| hypothetical protein AND_07614 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|321463633|gb|EFX74648.1| hypothetical protein DAPPUDRAFT_199790 [Daphnia pulex] Back     alignment and taxonomy information
>gi|195430708|ref|XP_002063395.1| GK21417 [Drosophila willistoni] gi|194159480|gb|EDW74381.1| GK21417 [Drosophila willistoni] Back     alignment and taxonomy information
>gi|158299456|ref|XP_319585.4| AGAP008843-PA [Anopheles gambiae str. PEST] gi|157013528|gb|EAA14816.4| AGAP008843-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query216
FB|FBgn0033635268 CG7777 [Drosophila melanogaste 0.856 0.690 0.473 3.5e-43
MGI|MGI:107387323 Aqp4 "aquaporin 4" [Mus muscul 0.819 0.547 0.472 9.3e-43
RGD|2143323 Aqp4 "aquaporin 4" [Rattus nor 0.819 0.547 0.472 1.9e-42
UNIPROTKB|F1LQ18333 Aqp4 "Aquaporin-4" [Rattus nor 0.819 0.531 0.472 1.9e-42
ZFIN|ZDB-GENE-040724-152320 aqp4 "aquaporin 4" [Danio reri 0.856 0.578 0.460 1.9e-42
UNIPROTKB|F1PEB5293 AQP4 "Uncharacterized protein" 0.819 0.604 0.477 3.2e-42
UNIPROTKB|O77750323 AQP4 "Aquaporin-4" [Bos taurus 0.819 0.547 0.461 1.7e-41
UNIPROTKB|P55087323 AQP4 "Aquaporin-4" [Homo sapie 0.819 0.547 0.466 2.2e-41
UNIPROTKB|I3LAR7240 AQP4 "Uncharacterized protein" 0.791 0.712 0.465 4.6e-41
UNIPROTKB|F1NJZ6313 AQP4 "Uncharacterized protein" 0.800 0.552 0.457 4.2e-40
FB|FBgn0033635 CG7777 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
 Identities = 90/190 (47%), Positives = 118/190 (62%)

Query:    21 LTRGLSIYFQA--LGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILK 78
             L  GL+I+     +GH+SGGH NPAVT GML  G++S+IRA FYVV QC+GAI+G+  +K
Sbjct:    53 LAFGLAIFMAITIVGHLSGGHVNPAVTAGMLVAGRISLIRAFFYVVFQCLGAIAGTAAVK 112

Query:    79 ALTPADFQGNLGLTTLNKHLTPVQGMXXXXXXXXXXXXXXXXXCDGNKPHAKAPAALAIG 138
              L   D+   LG T+L  ++T +QG+                 CD +KP ++  A LAIG
Sbjct:   113 ILIDQDYYNGLGHTSLAPNITELQGLGIEFFLGLLLVLVVFGACDPHKPDSRYTAPLAIG 172

Query:   139 LTVALGHLAAVDFTGASMNPARTFGSAVVANIWTDHWVYWAGPSLGGLVAGLLYTYLFVA 198
             + V LGHL  + +TGASMNPART G+A   +IW  HWVYW GP LGG+ A LLYT +  A
Sbjct:   173 MAVTLGHLGTIRYTGASMNPARTVGTAFATDIWASHWVYWVGPVLGGVAAALLYTQVLEA 232

Query:   199 ---PSIGEYS 205
                P + E S
Sbjct:   233 KPVPKVNEAS 242
GO:0005372 "water transmembrane transporter activity" evidence=ISS
GO:0016021 "integral to membrane" evidence=ISS
GO:0055085 "transmembrane transport" evidence=ISS
GO:0015267 "channel activity" evidence=ISS
MGI|MGI:107387 Aqp4 "aquaporin 4" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|2143 Aqp4 "aquaporin 4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1LQ18 Aqp4 "Aquaporin-4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040724-152 aqp4 "aquaporin 4" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1PEB5 AQP4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|O77750 AQP4 "Aquaporin-4" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P55087 AQP4 "Aquaporin-4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|I3LAR7 AQP4 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1NJZ6 AQP4 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P55087AQP4_HUMANNo assigned EC number0.50560.81480.5448yesN/A
P55088AQP4_MOUSENo assigned EC number0.51120.81480.5448yesN/A
P47863AQP4_RATNo assigned EC number0.51120.81480.5448yesN/A
O22588TIP32_ARATHNo assigned EC number0.41790.78700.6367yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query216
pfam00230218 pfam00230, MIP, Major intrinsic protein 3e-57
cd00333228 cd00333, MIP, Major intrinsic protein (MIP) superf 3e-52
TIGR00861216 TIGR00861, MIP, MIP family channel proteins 7e-50
PLN00027252 PLN00027, PLN00027, aquaporin TIP; Provisional 2e-31
COG0580241 COG0580, GlpF, Glycerol uptake facilitator and rel 9e-31
PLN00166250 PLN00166, PLN00166, aquaporin TIP2; Provisional 2e-30
PLN00167256 PLN00167, PLN00167, aquaporin TIP5; Provisional 7e-28
PRK05420231 PRK05420, PRK05420, aquaporin Z; Provisional 1e-25
PLN00182283 PLN00182, PLN00182, putative aquaporin NIP4; Provi 2e-22
PLN00184296 PLN00184, PLN00184, aquaporin NIP1; Provisional 6e-22
PLN00026298 PLN00026, PLN00026, aquaporin NIP; Provisional 1e-19
PLN00183274 PLN00183, PLN00183, putative aquaporin NIP7; Provi 7e-17
PTZ00016294 PTZ00016, PTZ00016, aquaglyceroporin; Provisional 5e-13
TIGR00861216 TIGR00861, MIP, MIP family channel proteins 1e-04
COG0580 241 COG0580, GlpF, Glycerol uptake facilitator and rel 0.004
>gnl|CDD|215807 pfam00230, MIP, Major intrinsic protein Back     alignment and domain information 
 Score =  180 bits (458), Expect = 3e-57
 Identities = 71/170 (41%), Positives = 97/170 (57%), Gaps = 1/170 (0%)

Query: 24  GLSIYFQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPA 83
            L       GH+SG H NPAVT  +L   ++S++RA++Y++AQ +GAI G+ +LK +T  
Sbjct: 49  ALFTLVYCTGHISGAHLNPAVTFALLVGRRISLLRAIYYIIAQLLGAICGAALLKGVTNG 108

Query: 84  DFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAP-AALAIGLTVA 142
             +      +L   +   Q   +E  L F LV  +F   D  +  +    A LAIG  V 
Sbjct: 109 LQRAGGFANSLAPGVNAGQAFVVEIILTFQLVYTVFATTDDPRNGSLGHVAPLAIGFAVF 168

Query: 143 LGHLAAVDFTGASMNPARTFGSAVVANIWTDHWVYWAGPSLGGLVAGLLY 192
           L HLA   +TGASMNPAR+FG AVV   W DHWVYW GP +G  +A L+Y
Sbjct: 169 LNHLAGGPYTGASMNPARSFGPAVVLWKWDDHWVYWVGPLIGAALAALVY 218

MIP (Major Intrinsic Protein) family proteins exhibit essentially two distinct types of channel properties: (1) specific water transport by the aquaporins, and (2) small neutral solutes transport, such as glycerol by the glycerol facilitators. Length = 218
>gnl|CDD|238204 cd00333, MIP, Major intrinsic protein (MIP) superfamily Back     alignment and domain information
>gnl|CDD|233156 TIGR00861, MIP, MIP family channel proteins Back     alignment and domain information
>gnl|CDD|177664 PLN00027, PLN00027, aquaporin TIP; Provisional Back     alignment and domain information
>gnl|CDD|223653 COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|165733 PLN00166, PLN00166, aquaporin TIP2; Provisional Back     alignment and domain information
>gnl|CDD|215085 PLN00167, PLN00167, aquaporin TIP5; Provisional Back     alignment and domain information
>gnl|CDD|235453 PRK05420, PRK05420, aquaporin Z; Provisional Back     alignment and domain information
>gnl|CDD|165748 PLN00182, PLN00182, putative aquaporin NIP4; Provisional Back     alignment and domain information
>gnl|CDD|177778 PLN00184, PLN00184, aquaporin NIP1; Provisional Back     alignment and domain information
>gnl|CDD|177663 PLN00026, PLN00026, aquaporin NIP; Provisional Back     alignment and domain information
>gnl|CDD|215092 PLN00183, PLN00183, putative aquaporin NIP7; Provisional Back     alignment and domain information
>gnl|CDD|240230 PTZ00016, PTZ00016, aquaglyceroporin; Provisional Back     alignment and domain information
>gnl|CDD|233156 TIGR00861, MIP, MIP family channel proteins Back     alignment and domain information
>gnl|CDD|223653 COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 216
KOG0223|consensus238 100.0
PLN00184296 aquaporin NIP1; Provisional 100.0
KOG0224|consensus316 100.0
PLN00182283 putative aquaporin NIP4; Provisional 100.0
COG0580241 GlpF Glycerol uptake facilitator and related perme 100.0
PF00230227 MIP: Major intrinsic protein; InterPro: IPR000425 100.0
PRK05420231 aquaporin Z; Provisional 100.0
PLN00026298 aquaporin NIP; Provisional 100.0
PTZ00016294 aquaglyceroporin; Provisional 100.0
PLN00027252 aquaporin TIP; Provisional 100.0
PLN00166250 aquaporin TIP2; Provisional 100.0
PLN00167256 aquaporin TIP5; Provisional 100.0
PLN00183274 putative aquaporin NIP7; Provisional 100.0
cd00333228 MIP Major intrinsic protein (MIP) superfamily. Mem 100.0
TIGR00861216 MIP MIP family channel proteins. processes. Some m 100.0
PLN00026 298 aquaporin NIP; Provisional 99.72
PLN00184 296 aquaporin NIP1; Provisional 99.7
PLN00183 274 putative aquaporin NIP7; Provisional 99.66
PLN00167 256 aquaporin TIP5; Provisional 99.62
PLN00182 283 putative aquaporin NIP4; Provisional 99.62
PLN00166 250 aquaporin TIP2; Provisional 99.62
PTZ00016 294 aquaglyceroporin; Provisional 99.59
PLN00027 252 aquaporin TIP; Provisional 99.58
PRK05420 231 aquaporin Z; Provisional 99.57
cd00333 228 MIP Major intrinsic protein (MIP) superfamily. Mem 99.55
TIGR00861216 MIP MIP family channel proteins. processes. Some m 99.51
COG0580 241 GlpF Glycerol uptake facilitator and related perme 99.49
KOG0224|consensus 316 99.46
KOG0223|consensus 238 99.44
PF00230227 MIP: Major intrinsic protein; InterPro: IPR000425 99.38
PRK11562268 nitrite transporter NirC; Provisional 80.46
>KOG0223|consensus Back     alignment and domain information 
Probab=100.00  E-value=1.5e-47  Score=316.45  Aligned_cols=183  Identities=48%  Similarity=0.836  Sum_probs=172.6

Q ss_pred             CCchHHHHHHHHHHH--HHHhhcccccccchHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCC-cCCCce
Q psy1510          14 TTVLYPYLTRGLSIY--FQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPAD-FQGNLG   90 (216)
Q Consensus        14 ~~~~~ia~~~G~~v~--i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~-~~~~~~   90 (216)
                      .+.+.++++||++++  +++++++||||+|||||+++++.|++++.++..|+++|++|+++|+.+.+.+.+++ ..+..+
T Consensus        42 ~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~~~~isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~  121 (238)
T KOG0223|consen   42 VGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAVGGKISLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLG  121 (238)
T ss_pred             chhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHHhCCCcHHHhHHHHHHHHHHHHHHHHHHheecCcccccCCcc
Confidence            679999999999999  99999999999999999999999999999999999999999999999999999984 344667


Q ss_pred             eecCCCCCchhhhHHHHHHHHHHHHHHHHh-hccCCCCCCCChhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhhc
Q psy1510          91 LTTLNKHLTPVQGMGIEFFLGFVLVLVIFG-VCDGNKPHAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVAN  169 (216)
Q Consensus        91 ~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~-~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~  169 (216)
                      .+.+.++.+..|+++.|++.||.|+++++. .+|+++.   .+.|+.+|+.+...+++.+++||++|||||+|||++..+
T Consensus       122 ~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~---~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~  198 (238)
T KOG0223|consen  122 LTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS---ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYG  198 (238)
T ss_pred             eeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc---ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhc
Confidence            778888999999999999999999999998 6666664   689999999999999999999999999999999999999


Q ss_pred             CcCceeehhhhhHHHHHHHHHHHHHHhcCC
Q psy1510         170 IWTDHWVYWAGPSLGGLVAGLLYTYLFVAP  199 (216)
Q Consensus       170 ~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~~  199 (216)
                      .|+++|+||+||++|+++++++|+.++.++
T Consensus       199 ~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~  228 (238)
T KOG0223|consen  199 SWDDHWIYWVGPLLGAILAALIYRLVFIPD  228 (238)
T ss_pred             CCCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence            999999999999999999999999999886

>PLN00184 aquaporin NIP1; Provisional Back     alignment and domain information
>KOG0224|consensus Back     alignment and domain information
>PLN00182 putative aquaporin NIP4; Provisional Back     alignment and domain information
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ] Back     alignment and domain information
>PRK05420 aquaporin Z; Provisional Back     alignment and domain information
>PLN00026 aquaporin NIP; Provisional Back     alignment and domain information
>PTZ00016 aquaglyceroporin; Provisional Back     alignment and domain information
>PLN00027 aquaporin TIP; Provisional Back     alignment and domain information
>PLN00166 aquaporin TIP2; Provisional Back     alignment and domain information
>PLN00167 aquaporin TIP5; Provisional Back     alignment and domain information
>PLN00183 putative aquaporin NIP7; Provisional Back     alignment and domain information
>cd00333 MIP Major intrinsic protein (MIP) superfamily Back     alignment and domain information
>TIGR00861 MIP MIP family channel proteins Back     alignment and domain information
>PLN00026 aquaporin NIP; Provisional Back     alignment and domain information
>PLN00184 aquaporin NIP1; Provisional Back     alignment and domain information
>PLN00183 putative aquaporin NIP7; Provisional Back     alignment and domain information
>PLN00167 aquaporin TIP5; Provisional Back     alignment and domain information
>PLN00182 putative aquaporin NIP4; Provisional Back     alignment and domain information
>PLN00166 aquaporin TIP2; Provisional Back     alignment and domain information
>PTZ00016 aquaglyceroporin; Provisional Back     alignment and domain information
>PLN00027 aquaporin TIP; Provisional Back     alignment and domain information
>PRK05420 aquaporin Z; Provisional Back     alignment and domain information
>cd00333 MIP Major intrinsic protein (MIP) superfamily Back     alignment and domain information
>TIGR00861 MIP MIP family channel proteins Back     alignment and domain information
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0224|consensus Back     alignment and domain information
>KOG0223|consensus Back     alignment and domain information
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ] Back     alignment and domain information
>PRK11562 nitrite transporter NirC; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query216
2d57_A301 Double Layered 2d Crystal Structure Of Aquaporin-4 4e-43
2zz9_A301 Structure Of Aquaporin-4 S180d Mutant At 2.8 A Reso 5e-43
3iyz_A340 Structure Of Aquaporin-4 S180d Mutant At 10.0 A Res 6e-43
3gd8_A223 Crystal Structure Of Human Aquaporin 4 At 1.8 And I 1e-41
1fqy_A269 Structure Of Aquaporin-1 At 3.8 A Resolution By Ele 9e-35
1j4n_A271 Crystal Structure Of The Aqp1 Water Channel Length 5e-34
3d9s_A266 Human Aquaporin 5 (Aqp5) - High Resolution X-Ray St 1e-32
2b6o_A263 Electron Crystallographic Structure Of Lens Aquapor 5e-31
1sor_A235 Aquaporin-0 Membrane Junctions Reveal The Structure 7e-31
3m9i_A220 Electron Crystallographic Structure Of Lens Aquapor 1e-30
1ymg_A263 The Channel Architecture Of Aquaporin O At 2.2 Angs 1e-30
3cn6_A304 Crystal Structure Of The Spinach Aquaporin Sopip2;1 2e-22
2b5f_A303 Crystal Structure Of The Spinach Aquaporin Sopip2;1 2e-22
1z98_A281 Crystal Structure Of The Spinach Aquaporin Sopip2;1 3e-22
3cn5_A304 Crystal Structure Of The Spinach Aquaporin Sopip2;1 5e-22
3cll_A300 Crystal Structure Of The Spinach Aquaporin Sopip2;1 6e-22
2evu_A246 Crystal Structure Of Aquaporin Aqpm At 2.3a Resolut 2e-12
3ne2_A246 Archaeoglobus Fulgidus Aquaporin Length = 246 2e-12
2o9d_A234 Crystal Structure Of Aqpz Mutant T183c. Length = 23 2e-10
2o9e_A234 Crystal Structure Of Aqpz Mutant T183c Complexed Wi 2e-10
1rc2_B231 2.5 Angstrom Resolution X-Ray Structure Of Aquapori 2e-10
3nk5_A234 Crystal Structure Of Aqpz Mutant F43w Length = 234 2e-10
2o9f_A234 Crystal Structure Of Aqpz Mutant L170c Length = 234 3e-10
2w1p_A279 1.4 Angstrom Crystal Structure Of P.Pastoris Aquapo 3e-10
3llq_A256 Aquaporin Structure From Plant Pathogen Agrobacteri 3e-09
3nka_A234 Crystal Structure Of Aqpz H174g,T183f Length = 234 4e-09
3nkc_A234 Crystal Structure Of Aqpz F43w,H174g,T183f Length = 4e-09
1ldf_A281 Crystal Structure Of The E. Coli Glycerol Facilitat 5e-06
1fx8_A281 Crystal Structure Of The E. Coli Glycerol Facilitat 8e-06
>pdb|2D57|A Chain A, Double Layered 2d Crystal Structure Of Aquaporin-4 (Aqp4m23) At 3.2 A Resolution By Electron Crystallography Length = 301 Back     alignment and structure 
Iteration: 1

 Score =  170 bits (431), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 85/178 (47%), Positives = 113/178 (63%), Gaps = 2/178 (1%)
Query: 21  LTRGLSI--YFQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILK 78
           L  GLSI    Q  GH+SGGH NPAVTV M+ T K+SI ++VFY+ AQC+GAI G+ IL 
Sbjct: 53  LCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILY 112
Query: 79  ALTPADFQGNLGLTTLNKHLTPVQGMXXXXXXXXXXXXXXXXXCDGNKPHAKAPAALAIG 138
            +TP    G LG+TT++ +LT   G+                 CD  +       ALAIG
Sbjct: 113 LVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSVALAIG 172
Query: 139 LTVALGHLAAVDFTGASMNPARTFGSAVVANIWTDHWVYWAGPSLGGLVAGLLYTYLF 196
            +VA+GHL A+++TGASMNPAR+FG AV+   W +HW+YW GP +G ++AG LY Y+F
Sbjct: 173 FSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVF 230
>pdb|2ZZ9|A Chain A, Structure Of Aquaporin-4 S180d Mutant At 2.8 A Resolution By Electron Crystallography Length = 301 Back     alignment and structure
>pdb|3IYZ|A Chain A, Structure Of Aquaporin-4 S180d Mutant At 10.0 A Resolution From Electron Micrograph Length = 340 Back     alignment and structure
>pdb|3GD8|A Chain A, Crystal Structure Of Human Aquaporin 4 At 1.8 And Its Mechanism Of Conductance Length = 223 Back     alignment and structure
>pdb|1FQY|A Chain A, Structure Of Aquaporin-1 At 3.8 A Resolution By Electron Crystallography Length = 269 Back     alignment and structure
>pdb|1J4N|A Chain A, Crystal Structure Of The Aqp1 Water Channel Length = 271 Back     alignment and structure
>pdb|3D9S|A Chain A, Human Aquaporin 5 (Aqp5) - High Resolution X-Ray Structure Length = 266 Back     alignment and structure
>pdb|2B6O|A Chain A, Electron Crystallographic Structure Of Lens Aquaporin-0 (Aqp0) (Lens Mip) At 1.9a Resolution, In A Closed Pore State Length = 263 Back     alignment and structure
>pdb|1SOR|A Chain A, Aquaporin-0 Membrane Junctions Reveal The Structure Of A Closed Water Pore Length = 235 Back     alignment and structure
>pdb|3M9I|A Chain A, Electron Crystallographic Structure Of Lens Aquaporin-0 (Aqp Mip) In E. Coli Polar Lipids Length = 220 Back     alignment and structure
>pdb|1YMG|A Chain A, The Channel Architecture Of Aquaporin O At 2.2 Angstrom Resolution Length = 263 Back     alignment and structure
>pdb|3CN6|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 S274e Mutant Length = 304 Back     alignment and structure
>pdb|2B5F|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 In An Open Conformation To 3.9 Resolution Length = 303 Back     alignment and structure
>pdb|1Z98|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 In A Closed Conformation Length = 281 Back     alignment and structure
>pdb|3CN5|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 S115e, S274e Mutant Length = 304 Back     alignment and structure
>pdb|3CLL|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 S115e Mutant Length = 300 Back     alignment and structure
>pdb|2EVU|A Chain A, Crystal Structure Of Aquaporin Aqpm At 2.3a Resolution Length = 246 Back     alignment and structure
>pdb|3NE2|A Chain A, Archaeoglobus Fulgidus Aquaporin Length = 246 Back     alignment and structure
>pdb|2O9D|A Chain A, Crystal Structure Of Aqpz Mutant T183c. Length = 234 Back     alignment and structure
>pdb|2O9E|A Chain A, Crystal Structure Of Aqpz Mutant T183c Complexed With Mercury Length = 234 Back     alignment and structure
>pdb|1RC2|B Chain B, 2.5 Angstrom Resolution X-Ray Structure Of Aquaporin Z Length = 231 Back     alignment and structure
>pdb|3NK5|A Chain A, Crystal Structure Of Aqpz Mutant F43w Length = 234 Back     alignment and structure
>pdb|2O9F|A Chain A, Crystal Structure Of Aqpz Mutant L170c Length = 234 Back     alignment and structure
>pdb|2W1P|A Chain A, 1.4 Angstrom Crystal Structure Of P.Pastoris Aquaporin, Aqy1, In A Closed Conformation At Ph 8.0 Length = 279 Back     alignment and structure
>pdb|3LLQ|A Chain A, Aquaporin Structure From Plant Pathogen Agrobacterium Tumerfaciens Length = 256 Back     alignment and structure
>pdb|3NKA|A Chain A, Crystal Structure Of Aqpz H174g,T183f Length = 234 Back     alignment and structure
>pdb|3NKC|A Chain A, Crystal Structure Of Aqpz F43w,H174g,T183f Length = 234 Back     alignment and structure
>pdb|1LDF|A Chain A, Crystal Structure Of The E. Coli Glycerol Facilitator (Glpf) Mutation W48f, F200t Length = 281 Back     alignment and structure
>pdb|1FX8|A Chain A, Crystal Structure Of The E. Coli Glycerol Facilitator (Glpf) With Substrate Glycerol Length = 281 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query216
3iyz_A340 Aquaporin-4; water transport, water channel, two-d 9e-80
2zz9_A301 Aquaporin-4; water transport, water channel, two-d 4e-79
1j4n_A271 Aquaporin 1; membrane protein, channel protein, tr 1e-77
2b6o_A263 Aquaporin-0, lens fiber major intrinsic protein; a 4e-77
3gd8_A223 Aquaporin-4; proton exclusion, structural genomics 2e-76
3d9s_A266 Aquaporin-5, AQP-5; aquaglyceroporin, membrane pro 2e-76
3cn5_A304 Aquaporin; membrane protein, transmembrane, transp 8e-73
3cn5_A 304 Aquaporin; membrane protein, transmembrane, transp 2e-04
2w2e_A279 AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating 2e-67
2o9g_A234 Aquaporin Z; integral membrane protein, structural 4e-67
3llq_A256 Aquaporin Z 2; aquaporin tetramer, membrane protei 3e-65
2f2b_A246 Aquaporin AQPM; protein, integral membrane protein 9e-53
3c02_A258 Aquaglyceroporin; membrane protein, glycerol, wate 2e-38
3c02_A 258 Aquaglyceroporin; membrane protein, glycerol, wate 2e-04
1ldf_A281 Glycerol uptake facilitator protein; glycerol-cond 6e-35
1ldf_A 281 Glycerol uptake facilitator protein; glycerol-cond 1e-04
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus} Length = 340 Back     alignment and structure
 Score =  241 bits (616), Expect = 9e-80
 Identities = 91/189 (48%), Positives = 123/189 (65%), Gaps = 2/189 (1%)

Query: 11  DSSTTVLYPYLTRGLSIYF--QALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCI 68
                ++   L  GLSI    Q  GH+SGGH NPAVTV M+ T K+SI ++VFY+ AQC+
Sbjct: 82  PLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCL 141

Query: 69  GAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPH 128
           GAI G+ IL  +TP    G LG+TT++ +LT   G+ +E  + F LV  IF  CD  +  
Sbjct: 142 GAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTD 201

Query: 129 AKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVANIWTDHWVYWAGPSLGGLVA 188
                ALAIG +VA+GHL A+++TGASMNPAR+FG AV+   W +HW+YW GP +G ++A
Sbjct: 202 VTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLA 261

Query: 189 GLLYTYLFV 197
           G LY Y+F 
Sbjct: 262 GALYEYVFC 270
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A Length = 301 Back     alignment and structure
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A Length = 271 Back     alignment and structure
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A* Length = 263 Back     alignment and structure
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens} Length = 223 Back     alignment and structure
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens} Length = 266 Back     alignment and structure
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A Length = 304 Back     alignment and structure
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A Length = 304 Back     alignment and structure
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A* Length = 279 Back     alignment and structure
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A* Length = 234 Back     alignment and structure
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str} Length = 256 Back     alignment and structure
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A* Length = 246 Back     alignment and structure
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum} Length = 258 Back     alignment and structure
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum} Length = 258 Back     alignment and structure
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A* Length = 281 Back     alignment and structure
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A* Length = 281 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query216
3iyz_A340 Aquaporin-4; water transport, water channel, two-d 100.0
3gd8_A223 Aquaporin-4; proton exclusion, structural genomics 100.0
2b6o_A263 Aquaporin-0, lens fiber major intrinsic protein; a 100.0
2zz9_A301 Aquaporin-4; water transport, water channel, two-d 100.0
3d9s_A266 Aquaporin-5, AQP-5; aquaglyceroporin, membrane pro 100.0
1j4n_A271 Aquaporin 1; membrane protein, channel protein, tr 100.0
2w2e_A279 AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating 100.0
2o9g_A234 Aquaporin Z; integral membrane protein, structural 100.0
1ldf_A281 Glycerol uptake facilitator protein; glycerol-cond 100.0
3cn5_A304 Aquaporin; membrane protein, transmembrane, transp 100.0
2f2b_A246 Aquaporin AQPM; protein, integral membrane protein 100.0
3llq_A256 Aquaporin Z 2; aquaporin tetramer, membrane protei 100.0
3c02_A258 Aquaglyceroporin; membrane protein, glycerol, wate 100.0
2b6o_A 263 Aquaporin-0, lens fiber major intrinsic protein; a 99.64
3d9s_A 266 Aquaporin-5, AQP-5; aquaglyceroporin, membrane pro 99.56
3llq_A 256 Aquaporin Z 2; aquaporin tetramer, membrane protei 99.56
2zz9_A 301 Aquaporin-4; water transport, water channel, two-d 99.54
2o9g_A 234 Aquaporin Z; integral membrane protein, structural 99.53
3gd8_A223 Aquaporin-4; proton exclusion, structural genomics 99.52
1j4n_A 271 Aquaporin 1; membrane protein, channel protein, tr 99.51
3iyz_A 340 Aquaporin-4; water transport, water channel, two-d 99.5
1ldf_A 281 Glycerol uptake facilitator protein; glycerol-cond 99.5
3c02_A 258 Aquaglyceroporin; membrane protein, glycerol, wate 99.5
2f2b_A 246 Aquaporin AQPM; protein, integral membrane protein 99.5
3cn5_A 304 Aquaporin; membrane protein, transmembrane, transp 99.48
2w2e_A 279 AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating 99.48
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus} Back     alignment and structure
Probab=100.00  E-value=2.2e-49  Score=340.95  Aligned_cols=187  Identities=49%  Similarity=0.908  Sum_probs=172.5

Q ss_pred             CCchHHHHHHHHHHH--HHHhhcccccccchHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCCcee
Q psy1510          14 TTVLYPYLTRGLSIY--FQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPADFQGNLGL   91 (216)
Q Consensus        14 ~~~~~ia~~~G~~v~--i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~   91 (216)
                      ++++.++++||++++  +++++++||||+|||||+++++.|+++|.+++.|+++|++||++|+.+++.++++.....++.
T Consensus        85 ~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~~lg~  164 (340)
T 3iyz_A           85 VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGV  164 (340)
T ss_pred             cchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcCceee
Confidence            688999999999998  899999999999999999999999999999999999999999999999999998776556777


Q ss_pred             ecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhhcCc
Q psy1510          92 TTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVANIW  171 (216)
Q Consensus        92 ~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~  171 (216)
                      +.+.++.+..++++.|+++||+|+++++.++|+++.......|+.||+.+.+.+..++++||++|||||+|||+++.++|
T Consensus       165 ~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~~d~~~~~~~~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~~w  244 (340)
T 3iyz_A          165 TTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNW  244 (340)
T ss_pred             ccCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCccCCcccchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHccCC
Confidence            77777889999999999999999999999988776544567899999999888888889999999999999999999999


Q ss_pred             CceeehhhhhHHHHHHHHHHHHHHhcCCC
Q psy1510         172 TDHWVYWAGPSLGGLVAGLLYTYLFVAPS  200 (216)
Q Consensus       172 ~~~~vy~~~p~~Ga~~a~~l~~~~~~~~~  200 (216)
                      .++|+||+||++|+++|+++|++++.++.
T Consensus       245 ~~~WVywvgPiiGailaallY~~l~~p~~  273 (340)
T 3iyz_A          245 ENHWIYWVGPIIGAVLAGALYEYVFCPDV  273 (340)
T ss_pred             CcEeehhHHHHHHHHHHHHHHHHHhCCCh
Confidence            99999999999999999999999987654
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens} Back     alignment and structure
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A* Back     alignment and structure
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A Back     alignment and structure
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens} Back     alignment and structure
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A Back     alignment and structure
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A* Back     alignment and structure
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A* Back     alignment and structure
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A* Back     alignment and structure
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A Back     alignment and structure
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A* Back     alignment and structure
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str} Back     alignment and structure
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum} Back     alignment and structure
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A* Back     alignment and structure
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens} Back     alignment and structure
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str} Back     alignment and structure
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A Back     alignment and structure
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A* Back     alignment and structure
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens} Back     alignment and structure
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A Back     alignment and structure
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus} Back     alignment and structure
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A* Back     alignment and structure
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum} Back     alignment and structure
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A* Back     alignment and structure
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A Back     alignment and structure
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 216
d1j4na_249 f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId 3e-38
d1ymga1234 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [ 8e-37
d1ymga1 234 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [ 0.001
d1rc2a_231 f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId 3e-28
d1fx8a_254 f.19.1.1 (A:) Glycerol uptake facilitator protein 2e-26
d1fx8a_ 254 f.19.1.1 (A:) Glycerol uptake facilitator protein 0.004
>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]} Length = 249 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-1
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  130 bits (328), Expect = 3e-38
 Identities = 72/177 (40%), Positives = 112/177 (63%)

Query: 24  GLSIYFQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPA 83
            ++   Q++GH+SG H NPAVT+G+L + ++S++RA+ Y++AQC+GAI  + IL  +T +
Sbjct: 61  SIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSS 120

Query: 84  DFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVAL 143
               +LGL  L   +   QG+GIE      LVL +    D  +        LAIG +VAL
Sbjct: 121 LPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSGPLAIGFSVAL 180

Query: 144 GHLAAVDFTGASMNPARTFGSAVVANIWTDHWVYWAGPSLGGLVAGLLYTYLFVAPS 200
           GHL A+D+TG  +NPAR+FGS+V+ + + DHW++W GP +G  +A L+Y ++    S
Sbjct: 181 GHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRS 237
>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]} Length = 234 Back     information, alignment and structure
>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]} Length = 234 Back     information, alignment and structure
>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]} Length = 231 Back     information, alignment and structure
>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]} Length = 254 Back     information, alignment and structure
>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]} Length = 254 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query216
d1ymga1234 Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]} 100.0
d1j4na_249 Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]} 100.0
d1fx8a_254 Glycerol uptake facilitator protein GlpF {Escheric 100.0
d1rc2a_231 Aquaporin Z {Escherichia coli [TaxId: 562]} 100.0
d1ymga1 234 Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]} 99.61
d1rc2a_ 231 Aquaporin Z {Escherichia coli [TaxId: 562]} 99.48
d1j4na_ 249 Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]} 99.46
d1fx8a_ 254 Glycerol uptake facilitator protein GlpF {Escheric 99.43
>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-0
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.2e-46  Score=310.58  Aligned_cols=187  Identities=41%  Similarity=0.740  Sum_probs=173.2

Q ss_pred             CCchHHHHHHHHHHH--HHHhhcccccccchHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCCcee
Q psy1510          14 TTVLYPYLTRGLSIY--FQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPADFQGNLGL   91 (216)
Q Consensus        14 ~~~~~ia~~~G~~v~--i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~   91 (216)
                      .+...++++||+.++  +++++++||||+|||||+++++.|++++++++.|+++|++||++|+++++.++++........
T Consensus        34 ~~~~~ial~~G~~v~~~i~~~g~iSGaH~NPAVTla~~~~g~i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~  113 (234)
T d1ymga1          34 LHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLAL  113 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCTTTTC
T ss_pred             cchHHHHHHHHHHHHHHHHHHhccccCccCchhhHHHHhccCCChhheeeeeehHHHHHHHHHHHHHHHcCccccccccc
Confidence            466789999999988  999999999999999999999999999999999999999999999999999999887666666


Q ss_pred             ecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhhcCc
Q psy1510          92 TTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVANIW  171 (216)
Q Consensus        92 ~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~  171 (216)
                      ..+.++.+..++++.|++.|++++++++...|++++......++.+|+.+.+.....++.||+++||||||+|+++.++|
T Consensus       114 ~~~~~~~~~~~~~~~E~~~t~~lv~~i~~~~~~~~~~~~~~~~l~ig~~v~~~~~~~~~~tG~~~NPAR~~gp~v~~~~~  193 (234)
T d1ymga1         114 NTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNF  193 (234)
T ss_dssp             CCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCSCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTCC
T ss_pred             cccCccchhhHHHHHHHHHHHHHHHhheeeecCCccCcCcceeEeehHHHHHHHHHhcccccccccchhhhhHHHhccCc
Confidence            66677889999999999999999999999988877666667899999999999999999999999999999999999999


Q ss_pred             CceeehhhhhHHHHHHHHHHHHHHhcCCC
Q psy1510         172 TDHWVYWAGPSLGGLVAGLLYTYLFVAPS  200 (216)
Q Consensus       172 ~~~~vy~~~p~~Ga~~a~~l~~~~~~~~~  200 (216)
                      +++|+||++|++|+++|+++|++++.++.
T Consensus       194 ~~~wiy~vgP~~Ga~laa~ly~~~~~~~~  222 (234)
T d1ymga1         194 TNHWVYWVGPVIGAGLGSLLYDFLLFPRL  222 (234)
T ss_dssp             TTTTHHHHHHHHHHHHHHHHHHTTTSCCC
T ss_pred             cCeeeeehHHHHHHHHHHHHHHHHHcCCC
Confidence            99999999999999999999999987654
>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]} Back     information, alignment and structure