Psyllid ID: psy1514

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760

TQSEAQPSNNNEPIQTSRPDDLPLLPGEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVSRVEKVGGQLSRGENSYGIELFCKDMRNLRFGHKQENHSRRNVFEKRFGHKQENHSRRNVFEKLQQYAFPLSHKLPIFAFEYTETFPENGWNIHEPIAELKRMGVPNDMWKISRINENYEICDSYPTILAIPTQVTDEEIRVIAQFRSRGRIPVLSWIHPESQATITRASQPLVGVGGKRCKEDERYIQMIMDANAQSHKLFIMDARPRSRGRIPVLSWIHPESQATITRASQPLVGVGGKRCKEDERYIQMIMDANAQSHKLFIMDARPSANAIANKAKGGGYESEESYQNAELVFLDIHNIHVMRESQRKLKELCFPQIDEARWFSGVDSTYWLKHIKCILAGACRIVDKVENHKTSVLVHCSDGWDRTAQIDEARWFSGVDSTYWLKHIKCILAGACRIVDKVENHKTSVLVHCSDGWDRTAQLTALAMLLLDPYYRTIKGFEVLIEKEWLSFGHKFQQRIGHGDDKHSDADRSPVFLQLIDAVWQVTTMFRHAFEFNEHFLITILDHLYSCRFGTFLFNSDRERNQENMKQRTVSLWSYINSSLDLYKNPLYFPQLHVLEPIASMRHIKLWKGLYCRWNPSMRAQDPIYQRTRELLVLKEQLDKSSEECRKELKARMPRTYIRPNIPKNSRIVGFERTTGQIIRGMSQRIESQNAKNCEHTYSPCISYSYLENFITIG

ccccccccccccccccccccccccccccEEEEEEccEEEEccccccEEEEEEEEcEEEEEEEccccccEEEEEccccEEEEEEEccccccccccccEEEEEccccEEEEEEccccccccccEEHHcccccccccHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHccccccccEEEEcccccccccccccEEEEcccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccEEEEccccHHHHHHHcccccccccccccccccHHccccccHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHccHHHHHHHHHHHccccHHHcccccccccccccccHHHcccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccHHHHHHHHHHcccccccccHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHccccccccccccccccccccccHHHHccccccc

ccccccccHHcccHHHcccccccccccccEEEEEEEEEEEEcccEEEEEEEEEEccEEEEEEccccccEEEEEEHHHEEEEEEEcccccccccccEEEEEEcccEEEEEEccHHHccHcccEEEEEEccHHHccHHHHHHHHHHHHccHHHccccHHHcccccccccHHHcccHHHHHHHHccccccEEEEcccccccccccccccEEEEccccHHHHHHHHHHEHHHcccEEEEEccccccEEEEEccEcccccccccHHHHHHHHHHHccccccccEEEEEcccEHHHcccEEEEEccccccEEEEEccEcccccccccHHHHHHHHHHHccccccccEEEEEcccHHHHHHHHccccccccccccccEEEEEcccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccHHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccHHHHHHHHHHHHHcHHHHcHHHHHHHHHHHcccccccHHHHHccccccccccccccHHHHHHHHHHHHHHHccccccEcHHHHHHHHHHHHHccccccccccHHHHHHccHHHHcccHHHHHcccccccEcccccccccccccccccccccccHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEcccccccccccccccccccccccccccccccccEEHHHHHHHEEcc

tqseaqpsnnnepiqtsrpddlpllpgeiIQGFAREVTylcpysgpargilsvTNYKLYFRSidretpyvvEVPLGVVSRVEKVGgqlsrgensyGIELFCKDmrnlrfghkqenhsrRNVFEKrfghkqenhsRRNVFEKLQQYafplshklpifafeytetfpengwnihePIAElkrmgvpndmwkisrinenyeicdsyptilaiptqvtDEEIRVIAQFrsrgripvlswihpesqatitrasqplvgvggkrckeDERYIQMIMDANAQSHKLFImdarprsrgripvlswihpesqatitrasqplvgvggkrckeDERYIQMIMDANAQSHKLFIMDARPSANAIANkakgggyeseesyQNAELVFLDIHNIHVMRESQRKLKELCfpqidearwfsgvdstyWLKHIKCILAGACRIVDKVENHKTSVLVHcsdgwdrtaqidearwfsgvdstyWLKHIKCILAGACRIVDKVENHKTSVLVHCSDGWDRTAQLTALAMLLLDPYYRTIKGFEVLIEKEWLSFGHKFqqrighgddkhsdadrsPVFLQLIDAVWQVTTMFRHAFEFNEHFLITILDHLyscrfgtflfnsdrernQENMKQRTVSLWSYINSsldlyknplyfpqlhvlepiaSMRHIKLWKGLycrwnpsmraqdpIYQRTRELLVLKEQLDKSSEECRKELKArmprtyirpnipknsrivgferttGQIIRGMSQRIesqnakncehtyspcisysYLENFITIG

tqseaqpsnnnepiqtsrpddlplLPGEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVSRVekvggqlsrgensygIELFCKDMRNLRFghkqenhsrrnVFEKrfghkqenhsrRNVFEKLQQYAFPLSHKLPIFAFEYTETFPENGWNIHEPIAELKRMGVPNDMWKISRINENYEICDSYPTILAIPTQVTDEEIRVIAQFrsrgripvlswihpesqatitrasqplvgvggkRCKEDERYIQMIMDANAQSHKLFIMDARPRSRGRIPVLSwihpesqatitrasqplvgvggkRCKEDERYIQMIMDANAQSHKLFIMDARPSANAIANKAKGGGYESEESYQNAELVFLDIHNIHVMRESQRKLKELCFPQIDEARWFSGVDSTYWLKHIKCILAGACRIVDKVENHKTSVLVHCSDGWDRTAQIDEARWFSGVDSTYWLKHIKCILAGACRIVDKVENHKTSVLVHCSDGWDRTAQLTALAMLLLDPYYRTIKGFEVLIEKEWLSFGHKFQQRIGHGDDKHSDADRSPVFLQLIDAVWQVTTMFRHAFEFNEHFLITILDHLYSCRFGTFLFNSDRERNQENMKQRTVSLWSYINSSLDLYKNPLYFPQLHVLEPIASMRHIKLWKGLYCRWNPSMRAQDPIYQRTRELLVLkeqldksseecrkelkarmprtyirpnipknsrivgFERTTGQIIRGMSQRIESQNAKNCEhtyspcisysylenfitig

TQSEAQPSNNNEPIQTSRPDDLPLLPGEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVSRVEKVGGQLSRGENSYGIELFCKDMRNLRFGHKQENHSRRNVFEKRFGHKQENHSRRNVFEKLQQYAFPLSHKLPIFAFEYTETFPENGWNIHEPIAELKRMGVPNDMWKISRINENYEICDSYPTILAIPTQVTDEEIRVIAQFRSRGRIPVLSWIHPESQATITRASQPLVGVGGKRCKEDERYIQMIMDANAQSHKLFIMDARPRSRGRIPVLSWIHPESQATITRASQPLVGVGGKRCKEDERYIQMIMDANAQSHKLFIMDARPSanaiankakgggYESEESYQNAELVFLDIHNIHVMRESQRKLKELCFPQIDEARWFSGVDSTYWLKHIKCILAGACRIVDKVENHKTSVLVHCSDGWDRTAQIDEARWFSGVDSTYWLKHIKCILAGACRIVDKVENHKTSVLVHCSDGWDRtaqltalamlllDPYYRTIKGFEVLIEKEWLSFGHKFQQRIGHGDDKHSDADRSPVFLQLIDAVWQVTTMFRHAFEFNEHFLITILDHLYSCRFGTFLFNSDRERNQENMKQRTVSLWSYINSSLDLYKNPLYFPQLHVLEPIASMRHIKLWKGLYCRWNPSMRAQDPIYQRTRELLVLKEQLDKSSEECRKELKARMPRTYIRPNIPKNSRIVGFERTTGQIIRGMSQRIESQNAKNCEHTYSPCISYSYLENFITIG

***********************LLPGEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVSRVEKVGGQLSRGENSYGIELFCKDMRNLRFG**************************NVFEKLQQYAFPLSHKLPIFAFEYTETFPENGWNIHEPIAELKRMGVPNDMWKISRINENYEICDSYPTILAIPTQVTDEEIRVIAQFRSRGRIPVLSWIHPESQATITRASQPLVGVGGKRCKEDERYIQMIMDANAQSHKLFIMDARPRSRGRIPVLSWIHPESQATITRASQPLVGVGGKRCKEDERYIQMIMDANAQSHKLFIMD**********************YQNAELVFLDIHNIHVMRESQRKLKELCFPQIDEARWFSGVDSTYWLKHIKCILAGACRIVDKVENHKTSVLVHCSDGWDRTAQIDEARWFSGVDSTYWLKHIKCILAGACRIVDKVENHKTSVLVHCSDGWDRTAQLTALAMLLLDPYYRTIKGFEVLIEKEWLSFGHKFQQRIGH**********SPVFLQLIDAVWQVTTMFRHAFEFNEHFLITILDHLYSCRFGTFLFNS***********RTVSLWSYINSSLDLYKNPLYFPQLHVLEPIASMRHIKLWKGLYCRWNPSMRAQDPIYQRTRELLVL**********************YIRPNIPKNSRIVGFERTTGQIIRGM********AKNCEHTYSPCISYSYLENFITI*

***********************LLPGEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVSRVEK************GIELFCKDMRNLRFGHKQENHSRRNVFEKRFGHKQENHSRRNVFEKLQQYAFPLSHKLPIFAFEYTETFPENGWNIHEPIAELKRMGVPNDMWKISRINENYEICDSYPTILAIPTQVTDEEIRVIAQFRSRGRIPVLSWIHPESQATITRASQPLVGVGGKRCKEDERYIQMIMDANAQSHKLFIMDARPRSRGRIPVLSWIHPESQ*******************EDERYIQMIMDANAQSHKLFIMDARPSA************ESEESYQNAELVFLDIHNIHVMRESQRKLKELCFPQID****************IKCILAGACRIVDKVENHKTSVLVH**DGW*****IDEARWFSGVDSTYWLKHIKCILAGACRIVDKVENHKTSVLVHCSDGWDRTAQLTALAMLLLDPYYRTIKGFEVLIEKEWLSFGHKFQ*************DRSPVFLQLIDAVWQVTTMFRHAFEFNEHFLITILDHLYSCRFGTFLFNSDRERNQENMKQRTVSLWSYINSSLDLYKNPLYFPQLHVLEPIASMRHIKLWKGLYCRWNPS***********************************************************************************CISYSYLENFITIG

**************QTSRPDDLPLLPGEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVSRVEKVGGQLSRGENSYGIELFCKDMRNLRFGHKQENHSRRNVFEKRFGHKQENHSRRNVFEKLQQYAFPLSHKLPIFAFEYTETFPENGWNIHEPIAELKRMGVPNDMWKISRINENYEICDSYPTILAIPTQVTDEEIRVIAQFRSRGRIPVLSWIHPESQATITRASQPLVGVGGKRCKEDERYIQMIMDANAQSHKLFIMDARPRSRGRIPVLSWIHPESQATITRASQPLVGVGGKRCKEDERYIQMIMDANAQSHKLFIMDARPSANAIANK***********YQNAELVFLDIHNIHVMRESQRKLKELCFPQIDEARWFSGVDSTYWLKHIKCILAGACRIVDKVENHKTSVLVHCSDGWDRTAQIDEARWFSGVDSTYWLKHIKCILAGACRIVDKVENHKTSVLVHCSDGWDRTAQLTALAMLLLDPYYRTIKGFEVLIEKEWLSFGHKFQQR**********ADRSPVFLQLIDAVWQVTTMFRHAFEFNEHFLITILDHLYSCRFGTFLFNSDRERNQENMKQRTVSLWSYINSSLDLYKNPLYFPQLHVLEPIASMRHIKLWKGLYCRWNPSMRAQDPIYQRTRELLVLKEQLDKSSEECRKELKARMPRTYIRPNIPKNSRIVGFERTTGQIIRGMSQRIESQNAKNCEHTYSPCISYSYLENFITIG

****************SRPDDLPLLPGEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVSRVEKVGGQLSRGENSYGIELFCKDMRNLRFGHKQENHSRRNVFEKRFGHKQENHSRRNVFEKLQQYAFPLSHKLPIFAFEYTETFPENGWNIHEPIAELKRMGVPNDMWKISRINENYEICDSYPTILAIPTQVTDEEIRVIAQFRSRGRIPVLSWIHPESQATITRASQPLVGVGGKRCKEDERYIQMIMDANAQSHKLFIMDARPRSRGRIPVLSWIHPESQATITRASQPLVGVGGKRCKEDERYIQMIMDANAQSHKLFIMDARPSANAIANKAKGGGYESEESYQNAELVFLDIHNIHVMRESQRKLKELCFPQIDEARWFSGVDSTYWLKHIKCILAGACRIVDKVENHKTSVLVHCSDGWDRTAQIDEARWFSGVDSTYWLKHIKCILAGACRIVDKVENHKTSVLVHCSDGWDRTAQLTALAMLLLDPYYRTIKGFEVLIEKEWLSFGHKFQQRIGHGDDKHSDADRSPVFLQLIDAVWQVTTMFRHAFEFNEHFLITILDHLYSCRFGTFLFNSDRERNQENMKQRTVSLWSYINSSLDLYKNPLYFPQLHVLEPIASMRHIKLWKGLYCRWNPSMRAQDPIYQRTRELLVLKEQLDKSSEECRKELKAR*****************************************CEHTYSPCISYSYLENFITIG

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		760	2.2.26 [Sep-21-2011]
Q13614		643	Myotubularin-related prot	yes	N/A	0.719	0.850	0.523	0.0
A6QLT2		643	Myotubularin-related prot	yes	N/A	0.734	0.867	0.516	0.0
Q5REB9		643	Myotubularin-related prot	yes	N/A	0.719	0.850	0.520	0.0
Q9Z2D1		643	Myotubularin-related prot	yes	N/A	0.714	0.844	0.520	0.0
Q5EB32		602	Myotubularin OS=Xenopus t	yes	N/A	0.710	0.897	0.473	1e-179
A0JMK5		620	Myotubularin-related prot	yes	N/A	0.736	0.903	0.446	1e-174
Q13496		603	Myotubularin OS=Homo sapi	no	N/A	0.743	0.936	0.426	1e-168
Q5R9S3		603	Myotubularin OS=Pongo abe	no	N/A	0.743	0.936	0.426	1e-168
A6QLT4		603	Myotubularin OS=Bos tauru	no	N/A	0.719	0.907	0.440	1e-165
Q52KU6		602	Myotubularin OS=Xenopus l	N/A	N/A	0.718	0.906	0.448	1e-161

>sp\|Q13614\|MTMR2_HUMAN Myotubularin-related protein 2 OS=Homo sapiens GN=MTMR2 PE=1 SV=4	Back alignment and function desciption

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/680 (52%), Positives = 445/680 (65%), Gaps = 133/680 (19%)

Query: 20  DDLPLLPGEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVS 79
           ++ PLLPGE I+  A++VTY+CP++G  RG L+VTNY+LYF+S++R+ P+V++  LGV++
Sbjct: 74  EEPPLLPGENIKDMAKDVTYICPFTGAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVIN 133

Query: 80  RVEKVGGQLSRGENSYGIELFCKDMRNLRFGHKQENHSRRNVFEKRFGHKQENHSRRNVF 139
           RVEK+GG  SRGENSYG+E  CKD+RNLRF HK E  +R                 R++F
Sbjct: 134 RVEKIGGASSRGENSYGLETVCKDIRNLRFAHKPEGRTR-----------------RSIF 176

Query: 140 EKLQQYAFPLSHKLPIFAFEYTETFPENGWNIHEPIAELKRMGVPNDMWKISRINENYEI 199
           E L +YAFP+S+ LP+FAFEY E FPENG                   WK+         
Sbjct: 177 ENLMKYAFPVSNNLPLFAFEYKEVFPENG-------------------WKL--------- 208

Query: 200 CDSYPTILAIPTQVTDEEIRVIAQFRSRGRIPVLSWIHPESQATITRASQPLVGVGGKRC 259
              Y  +L               ++R +G IP  SW        IT+ ++       + C
Sbjct: 209 ---YDPLL---------------EYRRQG-IPNESW-------RITKINERY-----ELC 237

Query: 260 KEDERYIQMIMDANAQSHKLFIMDARPRSRGRIPVLSWIHPESQATITRASQPLVGVGGK 319
             D     +++ AN    +L  + A  RSRGRIPVLSWIHPESQATITR SQP+VGV GK
Sbjct: 238 --DTYPALLVVPANIPDEELKRV-ASFRSRGRIPVLSWIHPESQATITRCSQPMVGVSGK 294

Query: 320 RCKEDERYIQMIMDANAQSHKLFIMDARPSANAIANKAKGGGYESEESYQNAELVFLDIH 379
           R KEDE+Y+Q IMD+NAQSHK+FI DARPS NA+ANKAKGGGYESE++YQNAELVFLDIH
Sbjct: 295 RSKEDEKYLQAIMDSNAQSHKIFIFDARPSVNAVANKAKGGGYESEDAYQNAELVFLDIH 354

Query: 380 NIHVMRESQRKLKELCFPQIDEARWFSGVDSTYWLKHIKCILAGACRIVDKVENHKTSVL 439
           NIHVMRES RKLKE+ +P                                          
Sbjct: 355 NIHVMRESLRKLKEIVYPN----------------------------------------- 373

Query: 440 VHCSDGWDRTAQIDEARWFSGVDSTYWLKHIKCILAGACRIVDKVENHKTSVLVHCSDGW 499
                       I+E  W S ++ST+WL+HIK ILAGA RI DKVE+ KTSV+VHCSDGW
Sbjct: 374 ------------IEETHWLSNLESTHWLEHIKLILAGALRIADKVESGKTSVVVHCSDGW 421

Query: 500 DRTAQLTALAMLLLDPYYRTIKGFEVLIEKEWLSFGHKFQQRIGHGDDKHSDADRSPVFL 559
           DRTAQLT+LAML+LD YYRTI+GFEVL+EKEWLSFGH+FQ R+GHGD  H+DADRSPVFL
Sbjct: 422 DRTAQLTSLAMLMLDGYYRTIRGFEVLVEKEWLSFGHRFQLRVGHGDKNHADADRSPVFL 481

Query: 560 QLIDAVWQVTTMFRHAFEFNEHFLITILDHLYSCRFGTFLFNSDRERNQENMKQRTVSLW 619
           Q ID VWQ+T  F  AFEFNE+FLITILDHLYSC FGTFL NS+++R +EN+ +RTVSLW
Sbjct: 482 QFIDCVWQMTRQFPTAFEFNEYFLITILDHLYSCLFGTFLCNSEQQRGKENLPKRTVSLW 541

Query: 620 SYINSSLDLYKNPLYFP-QLHVLEPIASMRHIKLWKGLYCRWNPSMRAQDPIYQRTRELL 678
           SYINS L+ + NPLY     HVL P+ASMRH++LW G Y RWNP M+ Q+PI+ R +ELL
Sbjct: 542 SYINSQLEDFTNPLYGSYSNHVLYPVASMRHLELWVGYYIRWNPRMKPQEPIHNRYKELL 601

Query: 679 VLKEQLDKSSEECRKELKAR 698
             + +L K  EE ++E+  R
Sbjct: 602 AKRAELQKKVEELQREISNR 621

Phosphatase that acts on lipids with a phosphoinositol headgroup. Has phosphatase activity towards phosphatidylinositol 3-phosphate and phosphatidylinositol 3,5-bisphosphate.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: -

>sp\|A6QLT2\|MTMR2_BOVIN Myotubularin-related protein 2 OS=Bos taurus GN=MTMR2 PE=2 SV=1	Back alignment and function description

>sp\|Q5REB9\|MTMR2_PONAB Myotubularin-related protein 2 OS=Pongo abelii GN=MTMR2 PE=2 SV=1	Back alignment and function description

>sp\|Q9Z2D1\|MTMR2_MOUSE Myotubularin-related protein 2 OS=Mus musculus GN=Mtmr2 PE=1 SV=3	Back alignment and function description

>sp\|Q5EB32\|MTM1_XENTR Myotubularin OS=Xenopus tropicalis GN=mtm1 PE=2 SV=1	Back alignment and function description

>sp\|A0JMK5\|MTMR2_DANRE Myotubularin-related protein 2 OS=Danio rerio GN=mtmr2 PE=2 SV=2	Back alignment and function description

>sp\|Q13496\|MTM1_HUMAN Myotubularin OS=Homo sapiens GN=MTM1 PE=1 SV=2	Back alignment and function description

>sp\|Q5R9S3\|MTM1_PONAB Myotubularin OS=Pongo abelii GN=MTM1 PE=2 SV=1	Back alignment and function description

>sp\|A6QLT4\|MTM1_BOVIN Myotubularin OS=Bos taurus GN=MTM1 PE=2 SV=2	Back alignment and function description

>sp\|Q52KU6\|MTM1_XENLA Myotubularin OS=Xenopus laevis GN=mtm1 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		760
350416308		653	PREDICTED: myotubularin-related protein	0.731	0.851	0.638	0.0
340711503		653	PREDICTED: myotubularin-related protein	0.731	0.851	0.636	0.0
345479845		653	PREDICTED: myotubularin-related protein	0.731	0.851	0.626	0.0
345479847		617	PREDICTED: myotubularin-related protein	0.731	0.901	0.626	0.0
193631919		633	PREDICTED: myotubularin-related protein	0.739	0.887	0.612	0.0
383848405		653	PREDICTED: myotubularin-related protein	0.731	0.851	0.609	0.0
91077330		632	PREDICTED: similar to Myotubularin-relat	0.734	0.882	0.578	0.0
242009745		1000	mtm1, mtmr1,2, putative [Pediculus human	0.740	0.563	0.541	0.0
357619501		594	hypothetical protein KGM_02998 [Danaus p	0.688	0.880	0.548	0.0
115744161		678	PREDICTED: myotubularin-related protein	0.742	0.831	0.515	0.0

>gi\|350416308\|ref\|XP_003490907.1\| PREDICTED: myotubularin-related protein 2-like [Bombus impatiens]	Back alignment and taxonomy information

 Score =  870 bits (2249), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/691 (63%), Positives = 493/691 (71%), Gaps = 135/691 (19%)

Query: 23  PLLPGEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVSRVE 82
           PLL GE +QG A EVTY+CPYSGP RGILS+TNYKL+FRS+DRETPYVVEVPLGVVSR+E
Sbjct: 88  PLLNGERVQGIAHEVTYVCPYSGPVRGILSITNYKLHFRSVDRETPYVVEVPLGVVSRIE 147

Query: 83  KVGGQLSRGENSYGIELFCKDMRNLRFGHKQENHSRRNVFEKRFGHKQENHSRRNVFEKL 142
           KVGG  S+GENSYGIE+FCKDMRNLRF HKQE                 NHSRR+VFEKL
Sbjct: 148 KVGGASSKGENSYGIEVFCKDMRNLRFAHKQE-----------------NHSRRDVFEKL 190

Query: 143 QQYAFPLSHKLPIFAFEYTETFPENGWNIHEPIAELKRMGVPNDMWKISRINENYEICDS 202
           QQY+FPLSHKLP+FAFEY+ETFPENGWN++EPIAELKRMGV NDMWKIS+IN+ Y +CDS
Sbjct: 191 QQYSFPLSHKLPLFAFEYSETFPENGWNVYEPIAELKRMGVNNDMWKISKINDTYSVCDS 250

Query: 203 YPTILAIPTQVTDEEIRVIAQFRSRGRIPVLSWIHPESQATITRASQPLVGVGGKRCKED 262
           Y                           PV+ W  P +                      
Sbjct: 251 Y---------------------------PVV-WAVPAAAT-------------------- 262

Query: 263 ERYIQMIMDANAQSHKLFIMDARPRSRGRIPVLSWIHPESQATITRASQPLVGVGGKRCK 322
                   D + Q+   F      RSRGR+PVLSWIHPESQATITR +QPLVGVGGKR +
Sbjct: 263 --------DEDLQASAAF------RSRGRLPVLSWIHPESQATITRCAQPLVGVGGKRSR 308

Query: 323 EDERYIQMIMDANAQSHKLFIMDARPSANAIANKAKGGGYESEESYQNAELVFLDIHNIH 382
           EDERY+Q+IMDANAQSHKLFIMDARP  NA+ANKAKGGGYESE++YQNAELVFLDIHNIH
Sbjct: 309 EDERYVQLIMDANAQSHKLFIMDARPMPNAVANKAKGGGYESEDAYQNAELVFLDIHNIH 368

Query: 383 VMRESQRKLKELCFPQIDEARWFSGVDSTYWLKHIKCILAGACRIVDKVENHKTSVLVHC 442
           VMRES RKLKELCFP                                             
Sbjct: 369 VMRESLRKLKELCFPT-------------------------------------------- 384

Query: 443 SDGWDRTAQIDEARWFSGVDSTYWLKHIKCILAGACRIVDKVENHKTSVLVHCSDGWDRT 502
                    IDEARW SG++ST WLKHIK +LAGA RIVDKVENHKTSVLVHCSDGWDRT
Sbjct: 385 ---------IDEARWLSGIESTVWLKHIKYVLAGALRIVDKVENHKTSVLVHCSDGWDRT 435

Query: 503 AQLTALAMLLLDPYYRTIKGFEVLIEKEWLSFGHKFQQRIGHGDDKHSDADRSPVFLQLI 562
           AQLTALAML+LDPYYRTIKGFEVLIEKEWLSFGHKFQQRIGHG + HSDADRSPVFLQ +
Sbjct: 436 AQLTALAMLMLDPYYRTIKGFEVLIEKEWLSFGHKFQQRIGHGVEHHSDADRSPVFLQFM 495

Query: 563 DAVWQVTTMFRHAFEFNEHFLITILDHLYSCRFGTFLFNSDRERNQENMKQRTVSLWSYI 622
           D VWQ++  F +AFEFNEHFLITILDHLYSCRFGTFLF+S+RER  E +KQ+TVSLWSY 
Sbjct: 496 DCVWQISRQFPNAFEFNEHFLITILDHLYSCRFGTFLFSSERERVHEQVKQKTVSLWSYT 555

Query: 623 NSSLDLYKNPLYFPQLH---VLEPIASMRHIKLWKGLYCRWNPSMRAQDPIYQRTRELLV 679
           NS L LY+NPLY+   +   VL PIASMR+IK WK LYCRWNPSMR QDP+YQRTRELLV
Sbjct: 556 NSQLSLYQNPLYWAAPNYQLVLMPIASMRYIKPWKSLYCRWNPSMRQQDPVYQRTRELLV 615

Query: 680 LKEQLDKSSEECRKELKARMPRTYIRPNIPK 710
           LKEQL+K  EE R+E  +R  R+   P  P+
Sbjct: 616 LKEQLEKQLEEGRREQASRANRSMTSPAPPR 646

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi\|340711503\|ref\|XP_003394315.1\| PREDICTED: myotubularin-related protein 2-like [Bombus terrestris]	Back alignment and taxonomy information

>gi\|345479845\|ref\|XP_001605144.2\| PREDICTED: myotubularin-related protein 2-like isoform 1 [Nasonia vitripennis]	Back alignment and taxonomy information

>gi\|345479847\|ref\|XP_003424041.1\| PREDICTED: myotubularin-related protein 2-like isoform 2 [Nasonia vitripennis]	Back alignment and taxonomy information

>gi\|193631919\|ref\|XP_001951188.1\| PREDICTED: myotubularin-related protein 2-like [Acyrthosiphon pisum]	Back alignment and taxonomy information

>gi\|383848405\|ref\|XP_003699841.1\| PREDICTED: myotubularin-related protein 2 [Megachile rotundata]	Back alignment and taxonomy information

>gi\|91077330\|ref\|XP_974826.1\| PREDICTED: similar to Myotubularin-related protein 2 [Tribolium castaneum] gi\|270001666\|gb\|EEZ98113.1\| hypothetical protein TcasGA2_TC000531 [Tribolium castaneum]	Back alignment and taxonomy information

>gi\|242009745\|ref\|XP_002425643.1\| mtm1, mtmr1,2, putative [Pediculus humanus corporis] gi\|212509536\|gb\|EEB12905.1\| mtm1, mtmr1,2, putative [Pediculus humanus corporis]	Back alignment and taxonomy information

>gi\|357619501\|gb\|EHJ72046.1\| hypothetical protein KGM_02998 [Danaus plexippus]	Back alignment and taxonomy information

>gi\|115744161\|ref\|XP_788958.2\| PREDICTED: myotubularin-related protein 2-like [Strongylocentrotus purpuratus]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		760
UNIPROTKB\|G1N7S2		641	MTMR1 "Uncharacterized protein	0.343	0.407	0.574	2.5e-171
UNIPROTKB\|F1NGM1		672	MTMR1 "Uncharacterized protein	0.343	0.388	0.574	2.5e-171
UNIPROTKB\|F7D908		682	mtmr1 "Uncharacterized protein	0.325	0.362	0.584	3.1e-171
FB\|FBgn0025742		619	mtm "myotubularin" [Drosophila	0.314	0.386	0.657	3.4e-167
ZFIN\|ZDB-GENE-050327-48		649	mtmr1b "myotubularin related p	0.319	0.374	0.557	6e-162
UNIPROTKB\|F1RQ28		603	MTM1 "Uncharacterized protein"	0.351	0.442	0.514	9.7e-162
UNIPROTKB\|A6QLT4		603	MTM1 "Myotubularin" [Bos tauru	0.339	0.427	0.517	2e-161
UNIPROTKB\|F1Q1K0		654	MTM1 "Uncharacterized protein"	0.351	0.408	0.514	1.1e-160
MGI\|MGI:1099452		603	Mtm1 "X-linked myotubular myop	0.326	0.411	0.549	1.4e-160
UNIPROTKB\|Q13496		603	MTM1 "Myotubularin" [Homo sapi	0.339	0.427	0.524	2.3e-160

UNIPROTKB\|G1N7S2 MTMR1 "Uncharacterized protein" [Meleagris gallopavo (taxid:9103)]	Back alignment and assigned GO terms

 Score = 824 (295.1 bits), Expect = 2.5e-171, Sum P(3) = 2.5e-171
 Identities = 151/263 (57%), Positives = 189/263 (71%)

Query:   452 IDEARWFSGVDSTYWLKHIKCILAGACRIVDKVENHKTSVLVHCSDGWDRXXXXXXXXXX 511
             IDE RW S VDST+WL++I+ +LAGA RI DK+E+ KTSV+VHCSDGWDR          
Sbjct:   371 IDETRWLSNVDSTHWLEYIRMLLAGAVRIADKIESGKTSVVVHCSDGWDRTAQLTALAML 430

Query:   512 XXDPYYRTIKGFEVLIEKEWLSFGHKFQQRIGHGDDKHSDADRSPVFLQLIDAVWQVTTM 571
               D YYRTIKGFE+LIEKEW+SFGH+F  R+GHG D H+DADRSP+FLQ ID VWQ+T  
Sbjct:   431 MLDSYYRTIKGFEILIEKEWISFGHRFAMRVGHGGDDHADADRSPIFLQFIDCVWQMTKQ 490

Query:   572 FRHAFEFNEHFLITILDHLYSCRFGTFLFNSDRERNQENMKQRTVSLWSYINSSLDLYKN 631
             F  AFEFNE FLITILDHLYSC FGTFL N ++ER +E +  +TVSLWSYINS LD + N
Sbjct:   491 FPAAFEFNELFLITILDHLYSCLFGTFLCNCEKERLKEELSTKTVSLWSYINSQLDEFTN 550

Query:   632 PLYFP-QLHVLEPIASMRHIKLWKGLYCRWNPSMRAQDPIYQRTRELLVLKEQLDKSSEE 690
             P Y   + HVL P+AS+ H++LW   Y RWNP MR Q PI+Q  +ELL ++ +L K  E+
Sbjct:   551 PFYVNYENHVLYPVASLNHLELWVNYYVRWNPRMRPQVPIHQNLKELLAIRTELQKKVED 610

Query:   691 CRKELKAR-MPRTYIRPNIPKNS 712
              ++E   R +  +  R + P +S
Sbjct:   611 LQREAATRSLSSSSDRGSSPSHS 633

GO:0004438 "phosphatidylinositol-3-phosphatase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

UNIPROTKB\|F1NGM1 MTMR1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|F7D908 mtmr1 "Uncharacterized protein" [Xenopus (Silurana) tropicalis (taxid:8364)]	Back alignment and assigned GO terms

FB\|FBgn0025742 mtm "myotubularin" [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-050327-48 mtmr1b "myotubularin related protein 1b" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|F1RQ28 MTM1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

UNIPROTKB\|A6QLT4 MTM1 "Myotubularin" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|F1Q1K0 MTM1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

MGI\|MGI:1099452 Mtm1 "X-linked myotubular myopathy gene 1" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|Q13496 MTM1 "Myotubularin" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A6QLT2	MTMR2_BOVIN	3, ., 1, ., 3, ., -	0.5166	0.7342	0.8678	yes	N/A
Q9Z2D1	MTMR2_MOUSE	3, ., 1, ., 3, ., -	0.5207	0.7144	0.8444	yes	N/A
Q5EB32	MTM1_XENTR	3, ., 1, ., 3, ., 6, 4	0.4733	0.7105	0.8970	yes	N/A
Q5REB9	MTMR2_PONAB	3, ., 1, ., 3, ., -	0.5205	0.7197	0.8506	yes	N/A
Q13614	MTMR2_HUMAN	3, ., 1, ., 3, ., -	0.5235	0.7197	0.8506	yes	N/A
A0JMK5	MTMR2_DANRE	3, ., 1, ., 3, ., -	0.4469	0.7368	0.9032	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	0.921
3rd Layer	3.1.3.48	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Alignment Graph	Length	Definition	E-value
Query		760
cd13357		148	cd13357, PH-GRAM_MTMR2_insect-like, Myotubularian	1e-80
cd13356		144	cd13356, PH-GRAM_MTMR2_mammal-like, Myotubularian	7e-61
cd13358		153	cd13358, PH-GRAM_MTMR1, Myotubularian related 1 pr	4e-59
cd13355		152	cd13355, PH-GRAM_MTM1, Myotubularian 1 protein (MT	9e-54
cd13223		94	cd13223, PH-GRAM_MTM-like, Myotubularian 1 and rel	1e-52
pfam06602		118	pfam06602, Myotub-related, Myotubularin-related	1e-44
pfam06602		118	pfam06602, Myotub-related, Myotubularin-related	3e-43
cd10570		94	cd10570, PH-GRAM, Pleckstrin Homology-Glucosyltran	6e-36
pfam13849		55	pfam13849, Y_phosphatase_m, Myotubularin Y_phospha	1e-35
smart00568		60	smart00568, GRAM, domain in glucosyltransferases,	1e-08
smart00404		105	smart00404, PTPc_motif, Protein tyrosine phosphata	9e-07
smart00012		105	smart00012, PTPc_DSPc, Protein tyrosine phosphatas	9e-07
pfam02893		60	pfam02893, GRAM, GRAM domain	1e-06
cd00900		88	cd00900, PH-like, Pleckstrin homology-like domain	4e-04

>gnl\|CDD\|241511 cd13357, PH-GRAM_MTMR2_insect-like, Myotubularian related 2 protein (MTMR2) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain	Back alignment and domain information

 Score =  253 bits (649), Expect = 1e-80
 Identities = 101/164 (61%), Positives = 122/164 (74%), Gaps = 17/164 (10%)

Query: 15  QTSRPDDLPLLPGEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVP 74
             + P++  LL GE  Q  A++VTYLCP+SGP RG L++TNYKLYFRS+D+E P++V+VP
Sbjct: 2   GLANPEEFTLLEGEKPQDIAKDVTYLCPFSGPVRGTLTITNYKLYFRSLDKEPPFIVDVP 61

Query: 75  LGVVSRVEKVGGQLSRGENSYGIELFCKDMRNLRFGHKQENHSRRNVFEKRFGHKQENHS 134
           LGV+ RVEKVGG  SRGENSYGIE+FCKDMRNL                 RF HKQENHS
Sbjct: 62  LGVIYRVEKVGGATSRGENSYGIEIFCKDMRNL-----------------RFAHKQENHS 104

Query: 135 RRNVFEKLQQYAFPLSHKLPIFAFEYTETFPENGWNIHEPIAEL 178
           RR VFEKLQ YAFPLS+ LP+FAFEY E F ENGW +++P+AE 
Sbjct: 105 RRLVFEKLQAYAFPLSNSLPLFAFEYKERFSENGWAVYDPVAEY 148

MTMR2 is a member of the myotubularin protein phosphatase gene family. MTMR2 binds to phosphoinositide lipids through its PH-GRAM domain, and can hydrolyze phosphatidylinositol(3)-phosphate and phosphatidylinositol(3,5)-biphosphate in vitro. Mutations in MTMR2 are a cause of Charcot-Marie-Tooth disease type 4B, an autosomal recessive demyelinating neuropathy. The protein can self-associate and form heteromers with MTMR5 and MTMR12. MTMR2 contains a N-terminal PH-GRAM domain, a Rac-induced recruitment domain (RID) domain, an active PTP domain, a SET-interaction domain, a coiled-coil region, and a C-terminal PDZ domain. Myotubularin-related proteins are a subfamily of protein tyrosine phosphatases (PTPs) that dephosphorylate D3-phosphorylated inositol lipids. Mutations in this family cause the human neuromuscular disorders myotubular myopathy and type 4B Charcot-Marie-Tooth syndrome. 6 of the 13 MTMRs (MTMRs 5, 9-13) contain naturally occurring substitutions of residues required for catalysis by PTP family enzymes. Although these proteins are predicted to be enzymatically inactive, they are thought to function as antagonists of endogenous phosphatase activity or interaction modules. Most MTMRs contain a N-terminal PH-GRAM domain, a Rac-induced recruitment domain (RID) domain, a PTP domain (which may be active or inactive), a SET-interaction domain, and a C-terminal coiled-coil region. In addition some members contain DENN domain N-terminal to the PH-GRAM domain and FYVE, PDZ, and PH domains C-terminal to the coiled-coil region. The GRAM domain, found in myotubularins, glucosyltransferases, and other putative membrane-associated proteins, is part of a larger motif with a pleckstrin homology (PH) domain fold. The PH domain family possesses multiple functions including the ability to bind phosphoinositides via its beta1/beta2, beta3/beta4, and beta6/beta7 connecting loops and to other proteins. However, no phosphoinositide binding sites have been found for the MTMRs to date. Members in this cd include Drosophila, sea urchins, mosquitos, bees, ticks, and anemones. Length = 148

>gnl\|CDD\|241510 cd13356, PH-GRAM_MTMR2_mammal-like, Myotubularian related 2 protein (MTMR2) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain	Back alignment and domain information

>gnl\|CDD\|241512 cd13358, PH-GRAM_MTMR1, Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain	Back alignment and domain information

>gnl\|CDD\|241509 cd13355, PH-GRAM_MTM1, Myotubularian 1 protein (MTM1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain	Back alignment and domain information

>gnl\|CDD\|241377 cd13223, PH-GRAM_MTM-like, Myotubularian 1 and related proteins Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase	Back alignment and domain information

>gnl\|CDD\|219103 pfam06602, Myotub-related, Myotubularin-related	Back alignment and domain information

>gnl\|CDD\|219103 pfam06602, Myotub-related, Myotubularin-related	Back alignment and domain information

>gnl\|CDD\|241306 cd10570, PH-GRAM, Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain	Back alignment and domain information

>gnl\|CDD\|206020 pfam13849, Y_phosphatase_m, Myotubularin Y_phosphatase-like	Back alignment and domain information

>gnl\|CDD\|214725 smart00568, GRAM, domain in glucosyltransferases, myotubularins and other putative membrane-associated proteins	Back alignment and domain information

>gnl\|CDD\|214649 smart00404, PTPc_motif, Protein tyrosine phosphatase, catalytic domain motif	Back alignment and domain information

>gnl\|CDD\|214469 smart00012, PTPc_DSPc, Protein tyrosine phosphatase, catalytic domain, undefined specificity	Back alignment and domain information

>gnl\|CDD\|217271 pfam02893, GRAM, GRAM domain	Back alignment and domain information

>gnl\|CDD\|241235 cd00900, PH-like, Pleckstrin homology-like domain	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		760
KOG4471\|consensus		717		100.0
KOG1089\|consensus		573		100.0
PF06602		353	Myotub-related: Myotubularin-like phosphatase doma	100.0
KOG1090\|consensus		1732		100.0
KOG1089\|consensus		573		99.82
KOG4471\|consensus		717		99.71
PF06602		353	Myotub-related: Myotubularin-like phosphatase doma	99.63
smart00568		61	GRAM domain in glucosyltransferases, myotubularins	97.73
PF11605		89	Vps36_ESCRT-II: Vacuolar protein sorting protein 3	97.63
PF02893		69	GRAM: GRAM domain; InterPro: IPR004182 The GRAM do	97.62
PF12578		142	3-PAP: Myotubularin-associated protein; InterPro:	96.76
smart00404		105	PTPc_motif Protein tyrosine phosphatase, catalytic	96.72
smart00012		105	PTPc_DSPc Protein tyrosine phosphatase, catalytic	96.72
KOG3294\|consensus		261		96.65
PF07289		339	DUF1448: Protein of unknown function (DUF1448); In	96.46
KOG1090\|consensus		1732		96.09
PF14470		96	bPH_3: Bacterial PH domain	95.99
smart00683		55	DM16 Repeats in sea squirt COS41.4, worm R01H10.6,	95.92
PF08000		124	bPH_1: Bacterial PH domain; InterPro: IPR012544 Th	95.35
KOG2774\|consensus		366		94.29
PF07289		339	DUF1448: Protein of unknown function (DUF1448); In	94.09
PF13350		164	Y_phosphatase3: Tyrosine phosphatase family; PDB:	93.66
PF03162		164	Y_phosphatase2: Tyrosine phosphatase family; Inter	93.16
PF14844		106	PH_BEACH: PH domain associated with Beige/BEACH; P	92.4
cd00127		139	DSPc Dual specificity phosphatases (DSP); Ser/Thr	91.95
smart00195		138	DSPc Dual specificity phosphatase, catalytic domai	91.61
PF00782		133	DSPc: Dual specificity phosphatase, catalytic doma	88.73
COG2365		249	Protein tyrosine/serine phosphatase [Signal transd	88.73
cd01201		108	Neurobeachin Neurobeachin Pleckstrin homology-like	85.57
cd00047		231	PTPc Protein tyrosine phosphatases (PTP) catalyze	83.08
smart00194		258	PTPc Protein tyrosine phosphatase, catalytic domai	82.16
PF00102		235	Y_phosphatase: Protein-tyrosine phosphatase; Inter	80.61

>KOG4471\|consensus	Back alignment and domain information

Probab=100.00  E-value=2e-167  Score=1364.40  Aligned_cols=561  Identities=58%  Similarity=1.027  Sum_probs=532.4

Q ss_pred             CCCCCCCCCCceEEEEeccEEEeCCCCCCeeEEEEEeceEEEEEecCCCCceEEEecccceeEEEEecCccCCCCCcccE
Q psy1514          18 RPDDLPLLPGEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVSRVEKVGGQLSRGENSYGI   97 (760)
Q Consensus        18 ~~~~~~lLPGE~i~~~a~~V~~~~p~~~~i~GtL~lTnyrLiF~~~~~~~~~~~~IPL~~I~~Vek~~~~~s~g~~~~~L   97 (760)
                      ...++++||||.++..+    |.|||.|++.|+|.||||||.|++.+.+.+++++|||+.|++|||++++++ |+++++|
T Consensus        30 ~~~~~~~L~GE~i~~~~----y~c~f~G~~~g~l~lsNyRl~fks~~t~~~~~~~VPLg~Ie~vek~~~~~~-g~ns~~L  104 (717)
T KOG4471|consen   30 LQVPFPLLPGESIIDEK----YICPFLGAVDGTLALSNYRLYFKSKETDPPFVLDVPLGVIERVEKRGGATS-GENSFGL  104 (717)
T ss_pred             ccCcccccCCcccccce----ecccccccccceEEeeeeEEEEEeccCCCceeEeechhhhhhhhhcCcccc-CCcceeE
Confidence            46889999999998765    889999999999999999999999988888999999999999999998776 8999999


Q ss_pred             EEEecCccEEEEeeccCCccccchhhhhccccccccchHHHHHHHHHhhcCCCCCCcccccccCCCCCCCC------ccc
Q psy1514          98 ELFCKDMRNLRFGHKQENHSRRNVFEKRFGHKQENHSRRNVFEKLQQYAFPLSHKLPIFAFEYTETFPENG------WNI  171 (760)
Q Consensus        98 ~I~CKDfR~l~f~f~~e~~~~~~vf~~~~~~~q~~~~~~~v~~~L~~la~p~s~~~~lFAF~y~~~~~~~g------W~~  171 (760)
                      +|.|||+|+++|+|+++++|                 ++++++.|.+++||.+...+||||.|...+..+|      |.+
T Consensus       105 ~i~CKDmr~lR~~fk~~~q~-----------------r~~~~e~L~~~~~p~~~~~~LFaF~~~~~~~~ng~e~~~~~~l  167 (717)
T KOG4471|consen  105 EITCKDMRNLRCAFKQEEQC-----------------RRDWFERLNRAAFPPAKSEDLFAFAYHAWFPVNGSENGQHWKL  167 (717)
T ss_pred             EEEeccccceeeecCccccc-----------------HHHHHHHHHHhcCCcccchhhhhcccHhhcCCCCccccccccc
Confidence            99999999999999999887                 6799999999999998888999999998887777      999


Q ss_pred             cCh--HHHHHhcCCCCCCeeEEeecCCccccCCCCcceEecCccCHHHHHHHHHHhhcCCCceEeeeccCCceEEEeccC
Q psy1514         172 HEP--IAELKRMGVPNDMWKISRINENYEICDSYPTILAIPTQVTDEEIRVIAQFRSRGRIPVLSWIHPESQATITRASQ  249 (760)
Q Consensus       172 yd~--~~E~~R~G~~~~~WRis~vN~~y~lC~TYP~~lvVP~sisD~~L~~~A~FRs~gR~PvlsW~h~~~~avL~RssQ  249 (760)
                      |+|  ..||+|||++++.||||.+|++|++|+|||..++||++|+|++|.++|.||+++|+|||+|+||.+||+|+||||
T Consensus       168 ~~P~~~~E~~r~g~~n~~WRIs~iNs~Y~LC~SYP~~l~VP~~isD~eL~~VasFRsr~RlPvlsw~Hp~sgAvIaRcSQ  247 (717)
T KOG4471|consen  168 YDPMFKNEYRRQGLPNESWRISKINSNYKLCDSYPAKLVVPKSISDEELLRVASFRSRCRLPVLSWRHPESGAVIARCSQ  247 (717)
T ss_pred             cChhhHhHHHhcCCChhheeeecccccccccccCccceEeccccCHHHHHHHhhhhhcCccceEEEEcCCCCceEEecCC
Confidence            999  999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCChhhHHHHHHHHHhccccccccccCCCcCcCCCCCccccCCCCchhhhhccCCCccCCCCCcccccHHHHH
Q psy1514         250 PLVGVGGKRCKEDERYIQMIMDANAQSHKLFIMDARPRSRGRIPVLSWIHPESQATITRASQPLVGVGGKRCKEDERYIQ  329 (760)
Q Consensus       250 PlvGl~g~rs~eDE~ll~~I~~a~~~s~~l~i~Darp~~~a~~pv~s~~~~~s~~~~~r~sqp~~G~~~~r~~~De~~l~  329 (760)
                      |+||+.|+||.+||+||++|+.+++++                                      |              
T Consensus       248 PlVG~~g~Rn~~DEkll~~i~~a~A~~--------------------------------------~--------------  275 (717)
T KOG4471|consen  248 PLVGWSGKRNKDDEKLLQAIADANAQD--------------------------------------G--------------  275 (717)
T ss_pred             cccchhcccccchHHHHHHHHHhcccc--------------------------------------c--------------
Confidence            999999999999999999999886420                                      0              


Q ss_pred             HHHHhcccCCceEEeccCcchHHHHHHhcCCCccCcccccCcEEEecCCcchhHHHHHHHHHHHhcCCCCccccccccCC
Q psy1514         330 MIMDANAQSHKLFIMDARPSANAIANKAKGGGYESEESYQNAELVFLDIHNIHVMRESQRKLKELCFPQIDEARWFSGVD  409 (760)
Q Consensus       330 ~i~~~~~~~~~l~i~D~R~~~~a~an~~~g~G~E~~~~Y~~~~~~fl~i~nih~~r~S~~kl~~~~~~~~~~s~wls~l~  409 (760)
                             ..+||+|+||||+.||+||+|||||||++++|||+++.|+||+|||+||+|+.|++++|.+..++++|++.|+
T Consensus       276 -------e~~KL~I~DARp~~nAvANkAkGGG~Es~~~Y~naEi~Fl~i~NIH~mR~s~~~~k~~~~~~~d~s~wlS~Le  348 (717)
T KOG4471|consen  276 -------ERRKLLIVDARPYTNAVANKAKGGGYESEEAYPNAEIVFLGIHNIHVMRESLRKLKEICYPSPDESNWLSALE  348 (717)
T ss_pred             -------ccceEEEEecccchhhhhccccCCCccChhccccceEEEeecchhHHHHHHHHhHHHhhcCCCCchhHHHhhc
Confidence                   1358999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhhHHHHHHHHhhhHHHHHHhhccCceeEEecCCCCCccccccccccccccCchhHHHHHHHHHHHHHHHHHHHhcCCc
Q psy1514         410 STYWLKHIKCILAGACRIVDKVENHKTSVLVHCSDGWDRTAQIDEARWFSGVDSTYWLKHIKCILAGACRIVDKVENHKT  489 (760)
Q Consensus       410 ~s~Wl~~i~~il~ga~~i~~~v~~~~~svlvHcSdGwDrt~qls~~~~~~~l~~~~Wl~~i~~iL~~a~~ia~~l~~~~~  489 (760)
                      +|+||                                                     +||+.+|.||++||++|+.+++
T Consensus       349 ~T~WL-----------------------------------------------------~Hi~~lLaga~~Ia~kVe~~~~  375 (717)
T KOG4471|consen  349 STHWL-----------------------------------------------------EHISSLLAGAVRIADKVESESR  375 (717)
T ss_pred             cchHH-----------------------------------------------------HHHHHHHHHHHHHHHHHhcCCc
Confidence            98888                                                     9999999999999999999999


Q ss_pred             EEEEeCCCCCCCcchHHHHHHHHhhhhhHHHHhHHHHHHHhhhhcCccccccccCCCCCCCCCCCCcchhhHHHHHHHHH
Q psy1514         490 SVLVHCSDGWDRTAQLTALAMLLLDPYYRTIKGFEVLIEKEWLSFGHKFQQRIGHGDDKHSDADRSPVFLQLIDAVWQVT  569 (760)
Q Consensus       490 sVLVhcsdGwDrT~qvssLaql~LDPyyRTi~GF~~LIEKEW~sfGH~F~~R~gh~~~~~~~~e~sPiFlqFLDcV~Ql~  569 (760)
                      |||||||||||||+||+||||||||||||||+||++||||||++|||||++|+||++.++.++++||||||||||||||+
T Consensus       376 sVlVHCSDGWDRT~QlvsLA~LlLDpYYRTieGFqvLVEkeWLsFGHkFadRvGhg~ns~~~ndrsPVFLQwlDcV~Ql~  455 (717)
T KOG4471|consen  376 SVLVHCSDGWDRTAQLVSLAMLLLDPYYRTIEGFQVLVEKEWLSFGHKFADRVGHGNNSHGDNDRSPVFLQWLDCVWQLM  455 (717)
T ss_pred             eEEEEcCCCccchHHHHHHHHHHhchhhhhhhhhHHHHHHHHHhcCChhhhhcCCCCCcccccccCchhHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccCCCcCCHHHHHHHHHhhhcCCCCccccCcHHHHHHhhhcCCceeeehhhccccccccCCCCCCCC-ceeeccCccc
Q psy1514         570 TMFRHAFEFNEHFLITILDHLYSCRFGTFLFNSDRERNQENMKQRTVSLWSYINSSLDLYKNPLYFPQL-HVLEPIASMR  648 (760)
Q Consensus       570 ~qfP~~FEFne~~L~~l~~h~ys~~fgTFL~nse~eR~~~~~~~~t~SlW~~~~~~~~~f~Np~Y~~~~-~~l~p~~~~~  648 (760)
                      ||||++|||||.||+.|+||+|||+|||||||||+||.+.++.++|.|||+||++..+.|.||+|++.. .||+|..+++
T Consensus       456 rqfP~aFEFne~fLi~i~dh~ySClFGTFLcN~ekeR~~~~i~~~t~slWs~l~s~~~~f~Np~y~~~s~~vL~Pvas~r  535 (717)
T KOG4471|consen  456 RQFPCAFEFNEAFLIKIVDHLYSCLFGTFLCNSEKEREKEDITERTGSLWSYLNSSLSNFCNPFYDPSSNGVLYPVASVR  535 (717)
T ss_pred             HhCCcccccCHHHHHHHHHHHHHhhhhhhhcCCHHHHhhcCcccchhhHHHHHhhcchhhcCcccCchhcccccchHhhh
Confidence            999999999999999999999999999999999999999999999999999999999999999999987 8999999999


Q ss_pred             CcccccccccccCCCCCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhccCCCCCC--CCCCCCCCc
Q psy1514         649 HIKLWKGLYCRWNPSMRAQDPIYQRTRELLVLKEQLDKSSEECRKELKARMPRTY--IRPNIPKNS  712 (760)
Q Consensus       649 ~~~lW~~~y~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  712 (760)
                      .+.||.+||+||+|++.++++..+.+.+++...+++++++++|+.+..+++.++.  +++.+|.++
T Consensus       536 ~l~LW~~~ylrw~~~~~~~~~~~q~~~~~v~~~~e~~k~~~el~~~~~~~a~~s~~~~r~~s~~~~  601 (717)
T KOG4471|consen  536 ALELWVQYYLRWNPPMEPQEPGCQRYAELVALSDELKKKVRELQVDEINRATSSLLPERLSSPPNS  601 (717)
T ss_pred             chhhceeeeeccCCCCCCCCccchhhhccccchhhhhhHHHHHhhhhhhcccccCcccccCCCccc
Confidence            9999999999999999999999999999999999999999999999998873322  344455443

>KOG1089\|consensus	Back alignment and domain information

>PF06602 Myotub-related: Myotubularin-like phosphatase domain; InterPro: IPR010569 This family represents a region within eukaryotic myotubularin-related proteins that is sometimes found with IPR004182 from INTERPRO	Back alignment and domain information

>KOG1090\|consensus	Back alignment and domain information

>KOG1089\|consensus	Back alignment and domain information

>KOG4471\|consensus	Back alignment and domain information

>PF06602 Myotub-related: Myotubularin-like phosphatase domain; InterPro: IPR010569 This family represents a region within eukaryotic myotubularin-related proteins that is sometimes found with IPR004182 from INTERPRO	Back alignment and domain information

>smart00568 GRAM domain in glucosyltransferases, myotubularins and other putative membrane-associated proteins	Back alignment and domain information

>PF11605 Vps36_ESCRT-II: Vacuolar protein sorting protein 36 Vps36; InterPro: IPR021648 Vps36 is a subunit of ESCRT-II, a protein involved in driving protein sorting from endosomes to lysosomes	Back alignment and domain information

>PF02893 GRAM: GRAM domain; InterPro: IPR004182 The GRAM domain is found in glucosyltransferases, myotubularins and other putative membrane-associated proteins	Back alignment and domain information

>PF12578 3-PAP: Myotubularin-associated protein; InterPro: IPR022587 The proteins in this entry are found in eukaryotes, and are typically between 115 and 138 amino acids in length	Back alignment and domain information

>smart00404 PTPc_motif Protein tyrosine phosphatase, catalytic domain motif	Back alignment and domain information

>smart00012 PTPc_DSPc Protein tyrosine phosphatase, catalytic domain, undefined specificity	Back alignment and domain information

>KOG3294\|consensus	Back alignment and domain information

>PF07289 DUF1448: Protein of unknown function (DUF1448); InterPro: IPR006606 This entry represents the Bardet-Biedl syndrome 5 protein (BBL5)	Back alignment and domain information

>KOG1090\|consensus	Back alignment and domain information

>PF14470 bPH_3: Bacterial PH domain	Back alignment and domain information

>smart00683 DM16 Repeats in sea squirt COS41	Back alignment and domain information

>PF08000 bPH_1: Bacterial PH domain; InterPro: IPR012544 This family contains many bacterial hypothetical proteins	Back alignment and domain information

>KOG2774\|consensus	Back alignment and domain information

>PF07289 DUF1448: Protein of unknown function (DUF1448); InterPro: IPR006606 This entry represents the Bardet-Biedl syndrome 5 protein (BBL5)	Back alignment and domain information

>PF13350 Y_phosphatase3: Tyrosine phosphatase family; PDB: 1YWF_A 2OZ5_B	Back alignment and domain information

>PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity	Back alignment and domain information

>PF14844 PH_BEACH: PH domain associated with Beige/BEACH; PDB: 1MI1_B 1T77_C	Back alignment and domain information

>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases	Back alignment and domain information

>smart00195 DSPc Dual specificity phosphatase, catalytic domain	Back alignment and domain information

>PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity	Back alignment and domain information

>COG2365 Protein tyrosine/serine phosphatase [Signal transduction mechanisms]	Back alignment and domain information

>cd01201 Neurobeachin Neurobeachin Pleckstrin homology-like domain	Back alignment and domain information

>cd00047 PTPc Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways	Back alignment and domain information

>smart00194 PTPc Protein tyrosine phosphatase, catalytic domain	Back alignment and domain information

>PF00102 Y_phosphatase: Protein-tyrosine phosphatase; InterPro: IPR000242 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		760
1zsq_A		528	Crystal Structure Of Mtmr2 In Complex With Phosphat		0.0
1lw3_A		657	Crystal Structure Of Myotubularin-Related Protein 2		1e-180
2yf0_A		512	Human Myotubularin Related Protein 6 (Mtmr6) Length		2e-67

>pdb|1ZSQ|A Chain A, Crystal Structure Of Mtmr2 In Complex With Phosphatidylinositol 3-Phosphate Length = 528

Back alignment and structure

Iteration: 1

Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/645 (50%), Positives = 411/645 (63%), Gaps = 133/645 (20%) Query: 23 PLLPGEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVSRVE 82 PLLPGE I+ A++VTY+CP++G RG L+VTNY+LYF+S++R+ P+V++ LGV++RVE Sbjct: 8 PLLPGENIKDMAKDVTYICPFTGAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVE 67 Query: 83 KVGGQLSRGENSYGIELFCKDMRNLRFGHKQENHSRRNVFEKRFGHKQENHSRRNVFEKL 142 K+GG SRGENSYG+E CKD+RNLRF HK E +R R++FE L Sbjct: 68 KIGGASSRGENSYGLETVCKDIRNLRFAHKPEGRTR-----------------RSIFENL 110 Query: 143 QQYAFPLSHKLPIFAFEYTETFPENGWNIHEPIAELKRMGVPNDMWKISRINENYEICDS 202 +YAFP+S+ LP+FAFEY E FPENGW +++P+ E +R G+PN+ W+I++INE YE+CD+ Sbjct: 111 MKYAFPVSNNLPLFAFEYKEVFPENGWKLYDPLLEYRRQGIPNESWRITKINERYELCDT 170 Query: 203 YPTILAIPTQVTDEEIRVIAQFRSRGRIPVLSWIHPESQATITRASQPLVGVGGKRCKED 262 YP +L +P + DEE++ +A FRSRGRIPVLSWIHPESQATITR SQP+VGV GKR KED Sbjct: 171 YPALLVVPANIPDEELKRVASFRSRGRIPVLSWIHPESQATITRCSQPMVGVSGKRSKED 230 Query: 263 ERYIQMIMDANAQSHKLFIMDARPRSRGRIPVLSWIHPESQATITRASQPLVGVGGKRCK 322 E+Y+Q IMD+NAQSHK+FI DAR P A +A GG Sbjct: 231 EKYLQAIMDSNAQSHKIFIFDAR--------------PSVNAVANKAK------GGGYES 270 Query: 323 EDERYIQMIMDANAQSHKLFIMDARPSXXXXXXXXXXXXYESEESYQNAELVFLDIHNIH 382 ED Q+ +L +D +IH Sbjct: 271 EDA----------YQNAELVFLDIH-----------------------------NIH--- 288 Query: 383 VMRESQRKLKELCFPQIDEARWFSGVDSTYWLKHIKCILAGACRIVDKVENHKTSVLVHC 442 VMRES RKLKE+ +P I+E W S ++ST+WL+HIK ILAGA RI DKVE+ KTSV+VH Sbjct: 289 VMRESLRKLKEIVYPNIEETHWLSNLESTHWLEHIKLILAGALRIADKVESGKTSVVVHS 348 Query: 443 SDGWDRTAQIDEARWFSGVDSTYWLKHIKCILAGACRIVDKVENHKTSVLVHCSDGWDRX 502 SDGWDRTAQ+ TS+ + DG Sbjct: 349 SDGWDRTAQL------------------------------------TSLAMLMLDG---- 368 Query: 503 XXXXXXXXXXXDPYYRTIKGFEVLIEKEWLSFGHKFQQRIGHGDDKHSDADRSPVFLQLI 562 YYRTI+GFEVL+EKEWLSFGH+FQ R+GHGD H+DADRSPVFLQ I Sbjct: 369 -------------YYRTIRGFEVLVEKEWLSFGHRFQLRVGHGDKNHADADRSPVFLQFI 415 Query: 563 DAVWQVTTMFRHAFEFNEHFLITILDHLYSCRFGTFLFNSDRERNQENMKQRTVSLWSYI 622 D VWQ+T F AFEFNE+FLITILDHLYSC FGTFL NS+++R +EN+ +RTVSLWSYI Sbjct: 416 DCVWQMTRQFPTAFEFNEYFLITILDHLYSCLFGTFLCNSEQQRGKENLPKRTVSLWSYI 475 Query: 623 NSSLDLYKNPLYFP-QLHVLEPIASMRHIKLWKGLYCRWNPSMRA 666 NS L+ + NPLY HVL P+ASMRH++LW G Y RWNP A Sbjct: 476 NSQLEDFTNPLYGSYSNHVLYPVASMRHLELWVGYYIRWNPRAAA 520

PyMOL of 1zsq

>pdb|1LW3|A Chain A, Crystal Structure Of Myotubularin-Related Protein 2 Complexed With Phosphate Length = 657

Back alignment and structure

>pdb|2YF0|A Chain A, Human Myotubularin Related Protein 6 (Mtmr6) Length = 512

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		760
1lw3_A		657	Myotubularin-related protein 2; protein-phosphate	1e-161
1zsq_A		528	Myotubularin-related protein 2; protein-phospholip	1e-155
2yf0_A		512	Myotubularin-related protein 6; hydrolase; 2.65A {	1e-132
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-08

>1lw3_A Myotubularin-related protein 2; protein-phosphate complex, hydrolase; 2.30A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1m7r_A Length = 657	Back alignment and structure

 Score =  480 bits (1235), Expect = e-161
 Identities = 339/706 (48%), Positives = 425/706 (60%), Gaps = 133/706 (18%)

Query: 8   SNNNEPIQTSRPDDLPLLPGEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRET 67
               E  + +  ++ PLLPGE I+  A++VTY+CP++G  RG L+VTNY+LYF+S++R+ 
Sbjct: 65  RVLRESNKLAEMEEPPLLPGENIKDMAKDVTYICPFTGAVRGTLTVTNYRLYFKSMERDP 124

Query: 68  PYVVEVPLGVVSRVEKVGGQLSRGENSYGIELFCKDMRNLRFGHKQENHSRRNVFEKRFG 127
           P+V++  LGV++RVEK+GG  SRGENSYG+E  CKD+RNLRF HK E  +RR++F     
Sbjct: 125 PFVLDASLGVINRVEKIGGASSRGENSYGLETVCKDIRNLRFAHKPEGRTRRSIF----- 179

Query: 128 HKQENHSRRNVFEKLQQYAFPLSHKLPIFAFEYTETFPENGWNIHEPIAELKRMGVPNDM 187
                       E L +YAFP+S+                        A   +   P + 
Sbjct: 180 ------------ENLMKYAFPVSN-------------------NLPLFAFEYKEVFPENG 208

Query: 188 WKISRINENYEICDSYPTILAIPTQVTDEEIRVIAQFRSRGRIPVLSWIHPESQATITRA 247
           WK+      Y                             R  IP  SW   +        
Sbjct: 209 WKLYDPLLEYR----------------------------RQGIPNESWRITKINERYELC 240

Query: 248 SQPLVGVGGKRCKEDERYIQMIMDANAQSHKLFIMDARPRSRGRIPVLSWIHPESQATIT 307
                 +       DE   ++               A  RSRGRIPVLSWIHPESQATIT
Sbjct: 241 DTYPALLVVPANIPDEELKRV---------------ASFRSRGRIPVLSWIHPESQATIT 285

Query: 308 RASQPLVGVGGKRCKEDERYIQMIMDANAQSHKLFIMDARPSANAIANKAKGGGYESEES 367
           R SQP+VGV GKR KEDE+Y+Q IMD+NAQSHK+FI DARPS NA+ANKAKGGGYESE++
Sbjct: 286 RCSQPMVGVSGKRSKEDEKYLQAIMDSNAQSHKIFIFDARPSVNAVANKAKGGGYESEDA 345

Query: 368 YQNAELVFLDIHNIHVMRESQRKLKELCFPQIDEARWFSGVDSTYWLKHIKCILAGACRI 427
           YQNAELVFLDIHNIHVMRES RKLKE+ +P I+E  W S ++ST+WL+HIK ILAGA RI
Sbjct: 346 YQNAELVFLDIHNIHVMRESLRKLKEIVYPNIEETHWLSNLESTHWLEHIKLILAGALRI 405

Query: 428 VDKVENHKTSVLVHCSDGWDRTAQIDEARWFSGVDSTYWLKHIKCILAGACRIVDKVENH 487
            DKVE+ KTSV+VH SDGWDRTAQ+                                   
Sbjct: 406 ADKVESGKTSVVVHSSDGWDRTAQL----------------------------------- 430

Query: 488 KTSVLVHCSDGWDRTAQLTALAMLLLDPYYRTIKGFEVLIEKEWLSFGHKFQQRIGHGDD 547
                             T+LAML+LD YYRTI+GFEVL+EKEWLSFGH+FQ R+GHGD 
Sbjct: 431 ------------------TSLAMLMLDGYYRTIRGFEVLVEKEWLSFGHRFQLRVGHGDK 472

Query: 548 KHSDADRSPVFLQLIDAVWQVTTMFRHAFEFNEHFLITILDHLYSCRFGTFLFNSDRERN 607
            H+DADRSPVFLQ ID VWQ+T  F  AFEFNE+FLITILDHLYSC FGTFL NS+++R 
Sbjct: 473 NHADADRSPVFLQFIDCVWQMTRQFPTAFEFNEYFLITILDHLYSCLFGTFLCNSEQQRG 532

Query: 608 QENMKQRTVSLWSYINSSLDLYKNPLYFPQL-HVLEPIASMRHIKLWKGLYCRWNPSMRA 666
           +EN+ +RTVSLWSYINS L+ + NPLY     HVL P+ASMRH++LW G Y RWNP M+ 
Sbjct: 533 KENLPKRTVSLWSYINSQLEDFTNPLYGSYSNHVLYPVASMRHLELWVGYYIRWNPRMKP 592

Query: 667 QDPIYQRTRELLVLKEQLDKSSEECRKELKARMPRTYIRPNIPKNS 712
           Q+PI+ R +ELL  + +L K  EE ++E+  R   +  R + P   
Sbjct: 593 QEPIHNRYKELLAKRAELQKKVEELQREISNRSTSSSERASSPAQC 638

PyMOL of 1lw3

>1zsq_A Myotubularin-related protein 2; protein-phospholipid complex, hydrolase; HET: PIB; 1.82A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1zvr_A* Length = 528	Back alignment and structure

>2yf0_A Myotubularin-related protein 6; hydrolase; 2.65A {Homo sapiens} Length = 512	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		760
1lw3_A		657	Myotubularin-related protein 2; protein-phosphate	100.0
1zsq_A		528	Myotubularin-related protein 2; protein-phospholip	100.0
2yf0_A		512	Myotubularin-related protein 6; hydrolase; 2.65A {	100.0
2yf0_A		512	Myotubularin-related protein 6; hydrolase; 2.65A {	99.82
1zsq_A		528	Myotubularin-related protein 2; protein-phospholip	99.81
1lw3_A		657	Myotubularin-related protein 2; protein-phosphate	99.8
2cay_A		145	VPS36 PH domain, vacuolar protein sorting protein	98.02
2hth_B		140	Vacuolar protein sorting protein 36; GLUE domain,	97.84
3hsa_A		126	Pleckstrin homology domain; YP_926556.1, structura	95.72
1w7p_D		566	VPS36P, YLR417W; ESCRT-II complex, endosomal prote	94.62
3s4o_A		167	Protein tyrosine phosphatase-like protein; structu	93.23
2img_A		151	Dual specificity protein phosphatase 23; DUSP23, V	92.68
4erc_A		150	Dual specificity protein phosphatase 23; alpha bet	91.8
3rgo_A		157	Protein-tyrosine phosphatase mitochondrial 1; phos	91.75
1rxd_A		159	Protein tyrosine phosphatase type IVA, member 1; p	91.61
3rz2_A		189	Protein tyrosine phosphatase type IVA 1; tyrosine	89.9
1xri_A		151	AT1G05000; structural genomics, protein structure	89.58
3ezz_A		144	Dual specificity protein phosphatase 4; alpha/beta	89.55
1zzw_A		149	Dual specificity protein phosphatase 10; MKP, PTP,	89.4
1fpz_A		212	Cyclin-dependent kinase inhibitor 3; alpha-beta sa	88.27
2r0b_A		154	Serine/threonine/tyrosine-interacting protein; str	88.19
1yn9_A		169	BVP, polynucleotide 5'-phosphatase; RNA triphospha	88.17
2q05_A		195	Late protein H1, dual specificity protein phosphat	88.11
1yz4_A		160	DUSP15, dual specificity phosphatase-like 15 isofo	87.61
1ywf_A		296	Phosphotyrosine protein phosphatase PTPB; four str	87.55
3cm3_A		176	Late protein H1, dual specificity protein phosphat	86.72
2e0t_A		151	Dual specificity phosphatase 26; conserved hypothe	86.65
1wrm_A		165	Dual specificity phosphatase 22; DSP, JNK, hydrola	86.61
2hcm_A		164	Dual specificity protein phosphatase; structural g	86.32
2nt2_A		145	Protein phosphatase slingshot homolog 2; alpha/bet	86.32
3s4e_A		144	Dual specificity protein phosphatase 19; PTP, prot	86.28
2hxp_A		155	Dual specificity protein phosphatase 9; human phos	86.22
2gjt_A		295	Receptor-type tyrosine-protein phosphatase PTPro;	86.12
3f81_A		183	Dual specificity protein phosphatase 3; hydrolase,	85.79
2oud_A		177	Dual specificity protein phosphatase 10; A central	85.43
3b77_A		193	Uncharacterized protein; pleckstrin-homology domai	85.09
3s3e_A		307	Tyrosine-protein phosphatase 10D; differentiation,	84.9
2esb_A		188	Dual specificity protein phosphatase 18; alpha/bet	83.79
2wgp_A		190	Dual specificity protein phosphatase 14; MKP6, DUS	83.23
1zyi_A		171	Methylosome subunit picln; PH domain, cell volume	83.13
2i1y_A		301	Receptor-type tyrosine-protein phosphatase; recept	82.71
1yfo_A		302	D1, receptor protein tyrosine phosphatase alpha; h	82.18
2p6x_A		309	Tyrosine-protein phosphatase non-receptor type 22;	82.0
3emu_A		161	Leucine rich repeat and phosphatase domain contain	81.92
2ooq_A		286	Receptor-type tyrosine-protein phosphatase T; prot	81.74
4grz_A		288	Tyrosine-protein phosphatase non-receptor type 6;	81.74
2i75_A		320	Tyrosine-protein phosphatase non-receptor type 4;	81.36
2b49_A		287	Protein tyrosine phosphatase, non-receptor type 3;	81.32
1p15_A		253	Protein-tyrosine phosphatase alpha; transmembrane,	80.92
1fpr_A		284	Protein-tyrosine phosphatase 1C; protein tyrosine	80.6

>1lw3_A Myotubularin-related protein 2; protein-phosphate complex, hydrolase; 2.30A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1m7r_A	Back alignment and structure

Probab=100.00  E-value=3.3e-161  Score=1377.84  Aligned_cols=560  Identities=65%  Similarity=1.158  Sum_probs=485.6

Q ss_pred             CCCCCCCCCceEEEEeccEEEeCCCCCCeeEEEEEeceEEEEEecCCCCceEEEecccceeEEEEecCccCCCCCcccEE
Q psy1514          19 PDDLPLLPGEIIQGFAREVTYLCPYSGPARGILSVTNYKLYFRSIDRETPYVVEVPLGVVSRVEKVGGQLSRGENSYGIE   98 (760)
Q Consensus        19 ~~~~~lLPGE~i~~~a~~V~~~~p~~~~i~GtL~lTnyrLiF~~~~~~~~~~~~IPL~~I~~Vek~~~~~s~g~~~~~L~   98 (760)
                      +.+++|||||.++.++++|++.+|+.+++.|||+||||||+|++.+.++.+++||||++|++|||+++.++.|.+++.|+
T Consensus        76 ~~~~~LLPGE~v~~~~~~V~~~~p~~~~~~GtL~lTnyrLiF~~~~~~~~~~~~IPL~~I~~Iekv~g~s~~g~~~~~l~  155 (657)
T 1lw3_A           76 MEEPPLLPGENIKDMAKDVTYICPFTGAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGGASSRGENSYGLE  155 (657)
T ss_dssp             -CCCCCCTTCCEEEEEEEEEEEETTTEEEEEEEEEESSEEEEEESSSSSCEEEEEEGGGEEEEEEECCTTCCSTTCSEEE
T ss_pred             CCCCccCCCeeEEEEeCCEEEecCCCCceeEEEEEECCEEEEEecCCCcceEEEecccceEEEEecCCCcccCCCCceEE
Confidence            47899999999999999999999998999999999999999999877667889999999999999987666777788999


Q ss_pred             EEecCccEEEEeeccCCccccchhhhhccccccccchHHHHHHHHHhhcCCCCCCcccccccCCCCCCCCccccChHHHH
Q psy1514          99 LFCKDMRNLRFGHKQENHSRRNVFEKRFGHKQENHSRRNVFEKLQQYAFPLSHKLPIFAFEYTETFPENGWNIHEPIAEL  178 (760)
Q Consensus        99 I~CKDfR~l~f~f~~e~~~~~~vf~~~~~~~q~~~~~~~v~~~L~~la~p~s~~~~lFAF~y~~~~~~~gW~~yd~~~E~  178 (760)
                      |+|||||+++|.|+++...                 ++++|++|.++++|.+...+||||.|+++++++||.+||+.+||
T Consensus       156 I~CKDfR~~~f~f~~~~~~-----------------~~~v~~~L~~~~~P~~~~~~lfAF~y~~~~~~~Gw~~yd~~~E~  218 (657)
T 1lw3_A          156 TVCKDIRNLRFAHKPEGRT-----------------RRSIFENLMKYAFPVSNNLPLFAFEYKEVFPENGWKLYDPLLEY  218 (657)
T ss_dssp             EEETTTEEEEEECCGGGCC-----------------HHHHHHHHHHHHSSGGGTCCCGGGTCCCCCSSCGGGSCCHHHHH
T ss_pred             EEecCCcEEEEEeCCccch-----------------HHHHHHHHHHHhCCCcccccceeecccccccCCCceecCHHHHH
Confidence            9999999999999876443                 68999999999999877667999999999999999999999999


Q ss_pred             HhcCCCCCCeeEEeecCCccccCCCCcceEecCccCHHHHHHHHHHhhcCCCceEeeeccCCceEEEeccCcccccCCCC
Q psy1514         179 KRMGVPNDMWKISRINENYEICDSYPTILAIPTQVTDEEIRVIAQFRSRGRIPVLSWIHPESQATITRASQPLVGVGGKR  258 (760)
Q Consensus       179 ~R~G~~~~~WRis~vN~~y~lC~TYP~~lvVP~sisD~~L~~~A~FRs~gR~PvlsW~h~~~~avL~RssQPlvGl~g~r  258 (760)
                      +|||++++.||||.+|++|++|+|||+.+|||++|+|++|+++|+||++||||||||+|+.|||+|+|||||++|+.++|
T Consensus       219 ~R~g~~~~~WRis~vN~~y~~C~TYP~~lvVP~~isD~~L~~~a~fRs~~R~Pvlsw~h~~~~a~l~RsSQPl~G~~~~r  298 (657)
T 1lw3_A          219 RRQGIPNESWRITKINERYELCDTYPALLVVPANIPDEELKRVASFRSRGRIPVLSWIHPESQATITRCSQPMVGVSGKR  298 (657)
T ss_dssp             HHHTCSCSSEEEECTTTTSCSCTTSCSCEEEETTCCHHHHHHHHHHBGGGCCCEEEEECTTTCCEEEEECCBCCTTTTCC
T ss_pred             HHhCCCcccEEEEeecCCCCccCCCCCeEEEeCcCCHHHHHHHHHHhhcCCceEEEEEcCCCCcEEEEcCCcCcccccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHhccccccccccCCCcCcCCCCCccccCCCCchhhhhccCCCccCCCCCcccccHHHHHHHHHhcccC
Q psy1514         259 CKEDERYIQMIMDANAQSHKLFIMDARPRSRGRIPVLSWIHPESQATITRASQPLVGVGGKRCKEDERYIQMIMDANAQS  338 (760)
Q Consensus       259 s~eDE~ll~~I~~a~~~s~~l~i~Darp~~~a~~pv~s~~~~~s~~~~~r~sqp~~G~~~~r~~~De~~l~~i~~~~~~~  338 (760)
                      |.|||+||++|+.++                                                              ++.
T Consensus       299 ~~eDE~ll~ai~~a~--------------------------------------------------------------~~~  316 (657)
T 1lw3_A          299 SKEDEKYLQAIMDSN--------------------------------------------------------------AQS  316 (657)
T ss_dssp             CHHHHHHHHHHHTTC--------------------------------------------------------------TTC
T ss_pred             CHHHHHHHHHHHHhC--------------------------------------------------------------ccc
Confidence            999999998886643                                                              123


Q ss_pred             CceEEeccCcchHHHHHHhcCCCccCcccccCcEEEecCCcchhHHHHHHHHHHHhcCCCCccccccccCCchhhHHHHH
Q psy1514         339 HKLFIMDARPSANAIANKAKGGGYESEESYQNAELVFLDIHNIHVMRESQRKLKELCFPQIDEARWFSGVDSTYWLKHIK  418 (760)
Q Consensus       339 ~~l~i~D~R~~~~a~an~~~g~G~E~~~~Y~~~~~~fl~i~nih~~r~S~~kl~~~~~~~~~~s~wls~l~~s~Wl~~i~  418 (760)
                      .+++|+|+||..||++|+++|||||++++|++|+++|+||+|||+||+||.||+++|.+..++.+|++.||+|+||    
T Consensus       317 ~~l~I~DaRp~~nA~an~a~G~G~E~~~~Y~~~~~~fl~I~nIh~mr~S~~KL~~~c~p~~~~~~wls~Le~S~WL----  392 (657)
T 1lw3_A          317 HKIFIFDARPSVNAVANKAKGGGYESEDAYQNAELVFLDIHNIHVMRESLRKLKEIVYPNIEETHWLSNLESTHWL----  392 (657)
T ss_dssp             CCEEEEECSCHHHHHHHHTTTCCCCCTTTCTTEEEEECCCCCHHHHHHHHHHHHHHHSSCCCGGGHHHHHHHHCHH----
T ss_pred             CccEEEccCchhHHHHHhhcCCcccCcccccCceEEECCCccHHHHHHHHHHHHHHhCCCCcchhHHHHHHhcccH----
Confidence            5789999999999999999999999999999999999999999999999999999999887778888888877777    


Q ss_pred             HHHhhhHHHHHHhhccCceeEEecCCCCCccccccccccccccCchhHHHHHHHHHHHHHHHHHHHhcCCcEEEEeCCCC
Q psy1514         419 CILAGACRIVDKVENHKTSVLVHCSDGWDRTAQIDEARWFSGVDSTYWLKHIKCILAGACRIVDKVENHKTSVLVHCSDG  498 (760)
Q Consensus       419 ~il~ga~~i~~~v~~~~~svlvHcSdGwDrt~qls~~~~~~~l~~~~Wl~~i~~iL~~a~~ia~~l~~~~~sVLVhcsdG  498 (760)
                                                                       +||+.+|++|+.||++|+.+++|||||||||
T Consensus       393 -------------------------------------------------~hI~~iL~~A~~ia~~l~~~~~sVLVhcsDG  423 (657)
T 1lw3_A          393 -------------------------------------------------EHIKLILAGALRIADKVESGKTSVVVHSSDG  423 (657)
T ss_dssp             -------------------------------------------------HHHHHHHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             -------------------------------------------------HHHHHHHHHHHHHHHHHHcCCceEEEECCCC
Confidence                                                             9999999999999999999999999999999


Q ss_pred             CCCcchHHHHHHHHhhhhhHHHHhHHHHHHHhhhhcCccccccccCCCCCCCCCCCCcchhhHHHHHHHHHhhccCCCcC
Q psy1514         499 WDRTAQLTALAMLLLDPYYRTIKGFEVLIEKEWLSFGHKFQQRIGHGDDKHSDADRSPVFLQLIDAVWQVTTMFRHAFEF  578 (760)
Q Consensus       499 wDrT~qvssLaql~LDPyyRTi~GF~~LIEKEW~sfGH~F~~R~gh~~~~~~~~e~sPiFlqFLDcV~Ql~~qfP~~FEF  578 (760)
                      ||||+|||||||||||||||||+||++||||||++|||||.+||||+..+++++|+||||+|||||||||++|||++|||
T Consensus       424 wDrT~qlsSLaQLlLDPyYRTi~GF~vLIEKEWlsfGH~F~~R~gh~~~~~~~~e~SPvFlqFLDCV~QL~~QfP~aFEF  503 (657)
T 1lw3_A          424 WDRTAQLTSLAMLMLDGYYRTIRGFEVLVEKEWLSFGHRFQLRVGHGDKNHADADRSPVFLQFIDCVWQMTRQFPTAFEF  503 (657)
T ss_dssp             SSHHHHHHHHHHHHHCGGGGSHHHHHHHHHHHTTTTTCCHHHHHTTTCCCTTCTTCCCHHHHHHHHHHHHHHHCTTTCSB
T ss_pred             ccchHHHHHHHHHHhCccccHHHHHHHHHHHHHHhcCCChhhhcCCCCCCCCcCCCCCCHHHHHHHHHHHHHhCCCcccc
Confidence            99999999999999999999999999999999999999999999999887778999999999999999999999999999


Q ss_pred             CHHHHHHHHHhhhcCCCCccccCcHHHHHHhhhcCCceeeehhhccccccccCCCCCCCC-ceeeccCcccCcccccccc
Q psy1514         579 NEHFLITILDHLYSCRFGTFLFNSDRERNQENMKQRTVSLWSYINSSLDLYKNPLYFPQL-HVLEPIASMRHIKLWKGLY  657 (760)
Q Consensus       579 ne~~L~~l~~h~ys~~fgTFL~nse~eR~~~~~~~~t~SlW~~~~~~~~~f~Np~Y~~~~-~~l~p~~~~~~~~lW~~~y  657 (760)
                      ||.||++|+||+|||+|||||||||+||.+.++.++|.|||+|++++...|+||+|.|.. .+|+|.++++.+++|.+||
T Consensus       504 ne~fL~~L~dh~yS~~FGTFL~Nse~ER~~~~v~~~T~SlWs~i~~~~~~f~NplY~~~~~~vl~P~~~~~~l~lW~~~y  583 (657)
T 1lw3_A          504 NEYFLITILDHLYSCLFGTFLCNSEQQRGKENLPKRTVSLWSYINSQLEDFTNPLYGSYSNHVLYPVASMRHLELWVGYY  583 (657)
T ss_dssp             CHHHHHHHHHHHHHCSSSTTCSSSHHHHHHTTHHHHSCCHHHHHTTCTTTTBCTTTTCCCCCCCCCCCSTTTCCCCHHHH
T ss_pred             CHHHHHHHHHHhhhcccCCccccHHHHHHHhccCCCCccHHHHHhhChHhhcCCCcCCCCCceeccccccCCCEehHHHh
Confidence            999999999999999999999999999999999999999999999999999999999974 8999999999999999999


Q ss_pred             cccCCCCCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhccCCCCCCCCCCCCC
Q psy1514         658 CRWNPSMRAQDPIYQRTRELLVLKEQLDKSSEECRKELKARMPRTYIRPNIPK  710 (760)
Q Consensus       658 ~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  710 (760)
                      +||++.+++++++.++.++++...++|++++++|+++++.+++++++++++|.
T Consensus       584 ~R~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~  636 (657)
T 1lw3_A          584 IRWNPRMKPQEPIHNRYKELLAKRAELQKKVEELQREISNRSTSSSERASSPA  636 (657)
T ss_dssp             TCCSCC-----------------------------------------------
T ss_pred             CCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCcc
Confidence            99999999999999999999999999999999999999998877777766664

PyMOL of 1lw3

>1zsq_A Myotubularin-related protein 2; protein-phospholipid complex, hydrolase; HET: PIB; 1.82A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1zvr_A*	Back alignment and structure

>2yf0_A Myotubularin-related protein 6; hydrolase; 2.65A {Homo sapiens}	Back alignment and structure

>2yf0_A Myotubularin-related protein 6; hydrolase; 2.65A {Homo sapiens}	Back alignment and structure

>1zsq_A Myotubularin-related protein 2; protein-phospholipid complex, hydrolase; HET: PIB; 1.82A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1zvr_A*	Back alignment and structure

>1lw3_A Myotubularin-related protein 2; protein-phosphate complex, hydrolase; 2.30A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1m7r_A	Back alignment and structure

>2cay_A VPS36 PH domain, vacuolar protein sorting protein 36; transport, ESCRT-II, lipid-binding, multivesicular bodies, membrane; 1.9A {Saccharomyces cerevisiae} SCOP: b.55.1.12	Back alignment and structure

>2hth_B Vacuolar protein sorting protein 36; GLUE domain, PH domain, viral budding, ubiquitin complex, protein transport; 2.70A {Homo sapiens} SCOP: b.55.1.12 PDB: 2dx5_A	Back alignment and structure

>3hsa_A Pleckstrin homology domain; YP_926556.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE MLY; 1.99A {Shewanella amazonensis SB2B} SCOP: b.55.1.13 PDB: 3dcx_A*	Back alignment and structure

>1w7p_D VPS36P, YLR417W; ESCRT-II complex, endosomal protein sorting, protein transpo; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54	Back alignment and structure

>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}	Back alignment and structure

>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}	Back alignment and structure

>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A	Back alignment and structure

>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*	Back alignment and structure

>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A	Back alignment and structure

>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A	Back alignment and structure

>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A	Back alignment and structure

>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A	Back alignment and structure

>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}	Back alignment and structure

>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*	Back alignment and structure

>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}	Back alignment and structure

>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}	Back alignment and structure

>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}	Back alignment and structure

>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}	Back alignment and structure

>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*	Back alignment and structure

>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A	Back alignment and structure

>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}	Back alignment and structure

>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}	Back alignment and structure

>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}	Back alignment and structure

>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}	Back alignment and structure

>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}	Back alignment and structure

>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A	Back alignment and structure

>2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine phosphatase, glepp1, PTPU2, structural genom structural genomics consortium, SGC; 2.15A {Homo sapiens} PDB: 2g59_A 2pi7_A	Back alignment and structure

>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*	Back alignment and structure

>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}	Back alignment and structure

>3b77_A Uncharacterized protein; pleckstrin-homology domain, structural genomics, joint cente structural genomics, JCSG; 2.42A {Exiguobacterium sibiricum} SCOP: b.55.1.13	Back alignment and structure

>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis, signal transduction, developm protein, hydrolase; 2.40A {Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*	Back alignment and structure

>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}	Back alignment and structure

>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}	Back alignment and structure

>1zyi_A Methylosome subunit picln; PH domain, cell volume regulation, RNA splicing, translation; NMR {Canis lupus familiaris}	Back alignment and structure

>2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein tyrosine phosphatase precursor, phosph structural genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A	Back alignment and structure

>1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal transduction, glycoprotein, phosphorylation, signal; 2.25A {Mus musculus} SCOP: c.45.1.2	Back alignment and structure

>2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine phosphatase, lymphoid phosphatase, PEP, LYP, struct genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A 2qct_A* 2qcj_A* 3olr_A* 3omh_A*	Back alignment and structure

>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}	Back alignment and structure

>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine phosphatase, human, structural GE structural genomics consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo sapiens} PDB: 1rpm_A 2c7s_A	Back alignment and structure

>4grz_A Tyrosine-protein phosphatase non-receptor type 6; phosphatase domain, hydrolase; 1.37A {Homo sapiens} PDB: 4gry_A 4gs0_A* 1gwz_A 1fpr_A*	Back alignment and structure

>2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP, tyrosine phosphatase, MEG-1, structural genomics structural genomics consortium, SGC; 2.45A {Homo sapiens}	Back alignment and structure

>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU genomics, structural genomics consortium, SGC, hydrolase; 1.54A {Homo sapiens}	Back alignment and structure

>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase, phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2	Back alignment and structure

>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase, substrate specificity, residue shift, signaling protein; HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB: 1gwz_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		760
d1zsqa2		387	c.45.1.3 (A:199-585) Myotubularin-related protein	1e-150
d1zsqa2		387	c.45.1.3 (A:199-585) Myotubularin-related protein	2e-54
d1zsqa1		125	b.55.1.8 (A:74-198) Myotubularin-related protein 2	2e-45

>d1zsqa2 c.45.1.3 (A:199-585) Myotubularin-related protein 2, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 387	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Myotubularin-like phosphatases
domain: Myotubularin-related protein 2, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  442 bits (1137), Expect = e-150
 Identities = 243/380 (63%), Positives = 281/380 (73%), Gaps = 54/380 (14%)

Query: 284 ARPRSRGRIPVLSWIHPESQATITRASQPLVGVGGKRCKEDERYIQMIMDANAQSHKLFI 343
           A  RSRGRIPVLSWIHPESQATITR SQP+VGV GKR KEDE+Y+Q IMD+NAQSHK+FI
Sbjct: 61  ASFRSRGRIPVLSWIHPESQATITRCSQPMVGVSGKRSKEDEKYLQAIMDSNAQSHKIFI 120

Query: 344 MDARPSANAIANKAKGGGYESEESYQNAELVFLDIHNIHVMRESQRKLKELCFPQIDEAR 403
            DARPS NA+ANKAKGGGYESE++YQNAELVFLDIHNIHVMRES RKLKE+ +P I+E  
Sbjct: 121 FDARPSVNAVANKAKGGGYESEDAYQNAELVFLDIHNIHVMRESLRKLKEIVYPNIEETH 180

Query: 404 WFSGVDSTYWLKHIKCILAGACRIVDKVENHKTSVLVHCSDGWDRTAQIDEARWFSGVDS 463
           W S ++ST+WL+HIK ILAGA RI DKVE+ KTSV+VH SDGWDRTAQ+           
Sbjct: 181 WLSNLESTHWLEHIKLILAGALRIADKVESGKTSVVVHSSDGWDRTAQL----------- 229

Query: 464 TYWLKHIKCILAGACRIVDKVENHKTSVLVHCSDGWDRTAQLTALAMLLLDPYYRTIKGF 523
                                                     T+LAML+LD YYRTI+GF
Sbjct: 230 ------------------------------------------TSLAMLMLDGYYRTIRGF 247

Query: 524 EVLIEKEWLSFGHKFQQRIGHGDDKHSDADRSPVFLQLIDAVWQVTTMFRHAFEFNEHFL 583
           EVL+EKEWLSFGH+FQ R+GHGD  H+DADRSPVFLQ ID VWQ+T  F  AFEFNE+FL
Sbjct: 248 EVLVEKEWLSFGHRFQLRVGHGDKNHADADRSPVFLQFIDCVWQMTRQFPTAFEFNEYFL 307

Query: 584 ITILDHLYSCRFGTFLFNSDRERNQENMKQRTVSLWSYINSSLDLYKNPLYFPQL-HVLE 642
           ITILDHLYSC FGTFL NS+++R +EN+ +RTVSLWSYINS L+ + NPLY     HVL 
Sbjct: 308 ITILDHLYSCLFGTFLCNSEQQRGKENLPKRTVSLWSYINSQLEDFTNPLYGSYSNHVLY 367

Query: 643 PIASMRHIKLWKGLYCRWNP 662
           P+ASMRH++LW G Y RWNP
Sbjct: 368 PVASMRHLELWVGYYIRWNP 387

PyMOL of d1zsqa2

>d1zsqa2 c.45.1.3 (A:199-585) Myotubularin-related protein 2, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 387	Back information, alignment and structure

>d1zsqa1 b.55.1.8 (A:74-198) Myotubularin-related protein 2, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 125	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		760
d1zsqa2		387	Myotubularin-related protein 2, C-terminal domain	100.0
d1zsqa1		125	Myotubularin-related protein 2, N-terminal domain	99.96
d1zsqa2		387	Myotubularin-related protein 2, C-terminal domain	99.75
d2caya1		130	Vacuolar protein sorting protein 36, VPS36 {Baker'	97.71
d2hthb1		129	Vacuolar protein sorting protein 36, VPS36 {Human	97.5
d3dcxa1		116	Uncharacterized protein Shew0819 {Shewanella loihi	93.85
d1xria_		151	Putative phosphatase At1g05000 {Thale cress (Arabi	92.05
d2rnrb1		108	TFIIH basal transcription factor complex p62 subun	90.77
d1ywfa1		272	Phosphotyrosine protein phosphatase PtpB {Mycobact	90.5
d1t77a2		110	Lipopolysaccharide-responsive and beige-like ancho	89.37
d1rxda_		152	Protein tyrosine phosphatase type IVa {Human (Homo	87.34
d1ohea2		182	Proline directed phosphatase CDC14b2 {Human (Homo	85.17
d1fpza_		176	Kinase associated phosphatase (kap) {Human (Homo s	83.66
d1m3ga_		145	Mapk phosphatase {Human (Homo sapiens), pac-1 [Tax	83.38
d1mkpa_		144	Mapk phosphatase {Human (Homo sapiens), pyst1 (mkp	83.23
d2pt0a1		313	Myo-inositol hexaphosphate phosphohydrolase (phyta	83.18
d1rpma_		278	Tyrosine phosphatase {Human (Homo sapiens), mu [Ta	82.41
d1lara1		317	RPTP Lar {Human (Homo sapiens) [TaxId: 9606]}	81.89
d1yfoa_		288	Tyrosine phosphatase {Mouse (Mus musculus) [TaxId:	81.83
d1lara2		249	RPTP Lar {Human (Homo sapiens) [TaxId: 9606]}	81.81
d1d5ra2		174	Phoshphoinositide phosphatase Pten (Pten tumor sup	81.41
d1lyva_		283	Protein-tyrosine phosphatase YopH, catalytic domai	81.41
d2shpa1		307	Tyrosine phosphatase {Human (Homo sapiens), shp-2	81.4
d1l8ka_		273	Tyrosine phosphatase {Human (Homo sapiens), T-cell	81.21

>d1zsqa2 c.45.1.3 (A:199-585) Myotubularin-related protein 2, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Myotubularin-like phosphatases
domain: Myotubularin-related protein 2, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-125  Score=1028.20  Aligned_cols=385  Identities=71%  Similarity=1.231  Sum_probs=368.0

Q ss_pred             CCCCCCccccChHHHHHhcCCCCCCeeEEeecCCccccCCCCcceEecCccCHHHHHHHHHHhhcCCCceEeeeccCCce
Q psy1514         163 TFPENGWNIHEPIAELKRMGVPNDMWKISRINENYEICDSYPTILAIPTQVTDEEIRVIAQFRSRGRIPVLSWIHPESQA  242 (760)
Q Consensus       163 ~~~~~gW~~yd~~~E~~R~G~~~~~WRis~vN~~y~lC~TYP~~lvVP~sisD~~L~~~A~FRs~gR~PvlsW~h~~~~a  242 (760)
                      .+++|||++||+.+||+|||++++.||||.||++|++|+|||+.+|||++++|++|+++|+||++||||||+|+|+.|||
T Consensus         2 ~~~edGW~~yd~~~E~~RlGl~~~~WRiS~iN~~Y~lC~SYP~~lVVP~~isD~~l~~~a~fr~~~R~Pvl~w~~~~~~a   81 (387)
T d1zsqa2           2 VFPENGWKLYDPLLEYRRQGIPNESWRITKINERYELCDTYPALLVVPANIPDEELKRVASFRSRGRIPVLSWIHPESQA   81 (387)
T ss_dssp             CCSSCGGGSCCHHHHHHHTTCSCSSEEEECTTTTSSSCTTSCSSEEEETTCCHHHHHHHHHHBGGGCCCEEEEECTTTCC
T ss_pred             CCCCCchhhcCHHHHHHhcCCCCCCEEEeeecCCCeecCCCCCceEEcCcCCHHHHHHHHHhhcCCCceEEEEEcCCCCc
Confidence            46789999999999999999998999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeccCcccccCCCCChhhHHHHHHHHHhccccccccccCCCcCcCCCCCccccCCCCchhhhhccCCCccCCCCCccc
Q psy1514         243 TITRASQPLVGVGGKRCKEDERYIQMIMDANAQSHKLFIMDARPRSRGRIPVLSWIHPESQATITRASQPLVGVGGKRCK  322 (760)
Q Consensus       243 vL~RssQPlvGl~g~rs~eDE~ll~~I~~a~~~s~~l~i~Darp~~~a~~pv~s~~~~~s~~~~~r~sqp~~G~~~~r~~  322 (760)
                      +|+|||||++|+.++||.|||+||++|..++                                                 
T Consensus        82 ~L~RssqP~~g~~~~r~~ede~~l~~i~~~~-------------------------------------------------  112 (387)
T d1zsqa2          82 TITRCSQPMVGVSGKRSKEDEKYLQAIMDSN-------------------------------------------------  112 (387)
T ss_dssp             EEEEECCBCCTTTTCCCHHHHHHHHHHHHHS-------------------------------------------------
T ss_pred             eEEeeCCcCCCccCCCcHHHHHHHHHHHHhC-------------------------------------------------
Confidence            9999999999999999999998888876643                                                 


Q ss_pred             ccHHHHHHHHHhcccCCceEEeccCcchHHHHHHhcCCCccCcccccCcEEEecCCcchhHHHHHHHHHHHhcCCCCccc
Q psy1514         323 EDERYIQMIMDANAQSHKLFIMDARPSANAIANKAKGGGYESEESYQNAELVFLDIHNIHVMRESQRKLKELCFPQIDEA  402 (760)
Q Consensus       323 ~De~~l~~i~~~~~~~~~l~i~D~R~~~~a~an~~~g~G~E~~~~Y~~~~~~fl~i~nih~~r~S~~kl~~~~~~~~~~s  402 (760)
                                   ++.++++|+|+||.+||++|+++|||+|+.++|++|+++|++|+|||+||+||.||+++|.+..++.
T Consensus       113 -------------~~~~~~~I~D~Rp~~na~an~~~ggG~E~~~~Y~~~~~~f~~i~nih~vr~s~~kl~~~~~~~~~~~  179 (387)
T d1zsqa2         113 -------------AQSHKIFIFDARPSVNAVANKAKGGGYESEDAYQNAELVFLDIHNIHVMRESLRKLKEIVYPNIEET  179 (387)
T ss_dssp             -------------SSCSSEEEEECSCHHHHHHHHHHTCCCCCTTTCTTEEEEECCCCCHHHHHHHHHHHHHHHSSCCCGG
T ss_pred             -------------CCcCcceeecCCcchhHHHhhhcCCCccchhcccCceeeeecccchHHHHHHHHHHHHHhcCCCchh
Confidence                         1235689999999999999999999999999999999999999999999999999999999887778


Q ss_pred             cccccCCchhhHHHHHHHHhhhHHHHHHhhccCceeEEecCCCCCccccccccccccccCchhHHHHHHHHHHHHHHHHH
Q psy1514         403 RWFSGVDSTYWLKHIKCILAGACRIVDKVENHKTSVLVHCSDGWDRTAQIDEARWFSGVDSTYWLKHIKCILAGACRIVD  482 (760)
Q Consensus       403 ~wls~l~~s~Wl~~i~~il~ga~~i~~~v~~~~~svlvHcSdGwDrt~qls~~~~~~~l~~~~Wl~~i~~iL~~a~~ia~  482 (760)
                      +|++.||+|+||                                                     +||+.+|++|+.||+
T Consensus       180 ~~~s~le~s~WL-----------------------------------------------------~~i~~~L~~A~~ia~  206 (387)
T d1zsqa2         180 HWLSNLESTHWL-----------------------------------------------------EHIKLILAGALRIAD  206 (387)
T ss_dssp             GHHHHHHHHCHH-----------------------------------------------------HHHHHHHHHHHHHHH
T ss_pred             hHHhhccccchH-----------------------------------------------------HHHHHHHHHHHHHHH
Confidence            888888777777                                                     999999999999999


Q ss_pred             HHhcCCcEEEEeCCCCCCCcchHHHHHHHHhhhhhHHHHhHHHHHHHhhhhcCccccccccCCCCCCCCCCCCcchhhHH
Q psy1514         483 KVENHKTSVLVHCSDGWDRTAQLTALAMLLLDPYYRTIKGFEVLIEKEWLSFGHKFQQRIGHGDDKHSDADRSPVFLQLI  562 (760)
Q Consensus       483 ~l~~~~~sVLVhcsdGwDrT~qvssLaql~LDPyyRTi~GF~~LIEKEW~sfGH~F~~R~gh~~~~~~~~e~sPiFlqFL  562 (760)
                      +|+.++++||||||||||||+|||||+|||||||||||+||++||||||++|||||.+|+||+..+..++|+||||+|||
T Consensus       207 ~l~~~~~sVlVh~sdGwD~T~qvsSL~ql~lDpyyRTi~GF~~LIekewi~~Gh~F~~R~~h~~~~~~~~e~sPvFl~FL  286 (387)
T d1zsqa2         207 KVESGKTSVVVHSSDGWDRTAQLTSLAMLMLDGYYRTIRGFEVLVEKEWLSFGHRFQLRVGHGDKNHADADRSPVFLQFI  286 (387)
T ss_dssp             HHHTTCCCEEEECSSSSSHHHHHHHHHHHHHCGGGGSHHHHHHHHHHHTTTTTCCHHHHHTTTCCCTTCTTCCCHHHHHH
T ss_pred             HHHhCCCeEEEeCCCCCchhHHHHHHHHHHhCcccccHHHHHHHHHHHHHhcCCchhhhhcCCCCCcccCCCCCchHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999988777889999999999


Q ss_pred             HHHHHHHhhccCCCcCCHHHHHHHHHhhhcCCCCccccCcHHHHHHhhhcCCceeeehhhccccccccCCCCCCCC-cee
Q psy1514         563 DAVWQVTTMFRHAFEFNEHFLITILDHLYSCRFGTFLFNSDRERNQENMKQRTVSLWSYINSSLDLYKNPLYFPQL-HVL  641 (760)
Q Consensus       563 DcV~Ql~~qfP~~FEFne~~L~~l~~h~ys~~fgTFL~nse~eR~~~~~~~~t~SlW~~~~~~~~~f~Np~Y~~~~-~~l  641 (760)
                      ||||||++|||++|||||.||++|+||+|||+|||||||||+||.+.++.++|.|||+|+++++++|+||+|++.. .+|
T Consensus       287 DcV~ql~~q~P~~FEF~e~~L~~l~~h~~s~~fgtFl~n~e~eR~~~~~~~~t~Slw~~~~~~~~~f~N~~Y~~~~~~~l  366 (387)
T d1zsqa2         287 DCVWQMTRQFPTAFEFNEYFLITILDHLYSCLFGTFLCNSEQQRGKENLPKRTVSLWSYINSQLEDFTNPLYGSYSNHVL  366 (387)
T ss_dssp             HHHHHHHHHCTTTCSBCHHHHHHHHHHHHHCSSSTTCSSSHHHHHHTTHHHHSCCHHHHHHTCGGGGBCTTTTSCSSSCC
T ss_pred             HHHHHHHHhCCcccccCHHHHHHHHHHhccccccccccCCHHHHHHhCcCCCCccHHHHHHHhHHHhcCCCCCCCCCCeE
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999865 799


Q ss_pred             eccCcccCcccccccccccCC
Q psy1514         642 EPIASMRHIKLWKGLYCRWNP  662 (760)
Q Consensus       642 ~p~~~~~~~~lW~~~y~R~~~  662 (760)
                      +|..+++.+++|.+||+||+|
T Consensus       367 ~P~~~~~~~~~W~~~ylR~~p  387 (387)
T d1zsqa2         367 YPVASMRHLELWVGYYIRWNP  387 (387)
T ss_dssp             CCCCSTTTCCCCHHHHTCSCC
T ss_pred             ccccCcccCeehHhhccccCC
Confidence            999999999999999999997

PyMOL of d1zsqa2

>d1zsqa1 b.55.1.8 (A:74-198) Myotubularin-related protein 2, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1zsqa2 c.45.1.3 (A:199-585) Myotubularin-related protein 2, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2caya1 b.55.1.12 (A:1-99,A:252-282) Vacuolar protein sorting protein 36, VPS36 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d2hthb1 b.55.1.12 (B:3-131) Vacuolar protein sorting protein 36, VPS36 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d3dcxa1 b.55.1.13 (A:9-124) Uncharacterized protein Shew0819 {Shewanella loihica [TaxId: 359303]}	Back information, alignment and structure

>d1xria_ c.45.1.1 (A:) Putative phosphatase At1g05000 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

>d2rnrb1 b.55.1.9 (B:1-108) TFIIH basal transcription factor complex p62 subunit (BTF2-p62), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1ywfa1 c.45.1.5 (A:4-275) Phosphotyrosine protein phosphatase PtpB {Mycobacterium tuberculosis [TaxId: 1773]}	Back information, alignment and structure

>d1t77a2 b.55.1.6 (A:2076-2185) Lipopolysaccharide-responsive and beige-like anchor protein LRBA {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human (Homo sapiens), pr-1 [TaxId: 9606]}	Back information, alignment and structure

>d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1 [TaxId: 9606]}	Back information, alignment and structure

>d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1 (mkp3) [TaxId: 9606]}	Back information, alignment and structure

>d2pt0a1 c.45.1.4 (A:34-346) Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA {Selenomonas ruminantium [TaxId: 971]}	Back information, alignment and structure

>d1rpma_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), mu [TaxId: 9606]}	Back information, alignment and structure

>d1lara1 c.45.1.2 (A:1307-1623) RPTP Lar {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1yfoa_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1lara2 c.45.1.2 (A:1628-1876) RPTP Lar {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1lyva_ c.45.1.2 (A:) Protein-tyrosine phosphatase YopH, catalytic domain {Yersinia enterocolitica [TaxId: 630]}	Back information, alignment and structure

>d2shpa1 c.45.1.2 (A:219-525) Tyrosine phosphatase {Human (Homo sapiens), shp-2 [TaxId: 9606]}	Back information, alignment and structure

>d1l8ka_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), T-cell [TaxId: 9606]}	Back information, alignment and structure