Psyllid ID: psy15292

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130--
Protein Sequence
MFKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAGHKER
Secondary Structure (PSIPRED)
cEEEEEEEEEEccccccccccccEEEEEEcccccccccccccccccccccccccEEEEEEccccccccccccccEEEEEEccHHHHHHHccccEEccccccEEEcccccEEEEEcccEEEcccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEEEEEEccccccccccccEEEEEEcccccccccEEEEEcccccccccccEEEEEEccccccccccccEEEEEEEEEccHHHHHHHHHccccccccccEEccccccccccccEEEEcccccccccccc
Coil and Loop (DISEMBL)
mfklntrqsfvhpqyspsdfrndvalikidkdvvfkqhiipvclpdqtvkLVGKSatvagwgrtrhasslssaiptyvsisndvalikidkdvvfkqhiipvclpdqtvkLVGKSAtvagwgrtrhaghker
Flexible Loop (DISEMBL)
mfklntrqsfvhpqyspsdfrnDVALIKIDKDVVFKQHIIpvclpdqtvklVGKSATvagwgrtrhasslssaiptYVSISNDVALIKIDKDVVFKQHIIpvclpdqtvklvgksatvagwgrtrhaghker
Low Complexity Region (SEG)
MFKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAGHKER
Disordered region (IsUnstruct)
******************DFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWG**********
Disordered Region (DISOPRED)
MFKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH**********YVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG****
Disordered Region (DISEMBL)
MFKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR*********
Disordered Region (DISPRO)
MFKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRT********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAGHKER
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	132	2.2.26 [Sep-21-2011]
Q7M4I3	243	Venom protease OS=Megabom	N/A	N/A	0.545	0.296	0.355	3e-10
Q05319	787	Serine proteinase stubble	no	N/A	0.484	0.081	0.406	3e-10
Q9GLP2	459	Vitamin K-dependent prote	yes	N/A	0.583	0.167	0.329	3e-09
Q28278	456	Vitamin K-dependent prote	yes	N/A	0.583	0.168	0.292	3e-08
P00745	456	Vitamin K-dependent prote	no	N/A	0.446	0.129	0.359	6e-08
P04070	461	Vitamin K-dependent prote	yes	N/A	0.446	0.127	0.375	7e-08
Q28661	458	Vitamin K-dependent prote	yes	N/A	0.583	0.168	0.302	8e-08
Q7Z5A4	293	Serine protease 42 OS=Hom	no	N/A	0.537	0.242	0.342	1e-07
Q28380	157	Vitamin K-dependent prote	no	N/A	0.446	0.375	0.359	1e-07
Q28412	157	Vitamin K-dependent prote	N/A	N/A	0.598	0.503	0.273	2e-07

>sp|Q7M4I3|SP4_MEGPE Venom protease OS=Megabombus pennsylvanicus PE=1 SV=1

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 3   KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLP-DQTVK---LVGKSATV 58
           ++      +HP Y  S+  +D+A++K++KDV F ++I P+CLP +++++    +G +  V
Sbjct: 77  QMGIESKLIHPDYVYSEHHDDIAILKLEKDVSFSEYIRPICLPIEESLRNNNFIGYNPFV 136

Query: 59  AGWGRTRHASSLSSAI 74
           AGWGR R+   LS A+
Sbjct: 137 AGWGRLRYKGPLSDAL 152

Megabombus pennsylvanicus (taxid: 28643)
EC: 3EC: .EC: 4EC: .EC: 2EC: 1EC: .EC: -

>sp|Q05319|STUB_DROME Serine proteinase stubble OS=Drosophila melanogaster GN=Sb PE=2 SV=2

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 41/64 (64%)

Query: 11  VHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSL 70
           VHP+YS   +  D+AL+K+++ + F  H+ P+CLP+    L+G +ATV GWGR     +L
Sbjct: 628 VHPKYSFLTYEYDLALVKLEQPLEFAPHVSPICLPETDSLLIGMNATVTGWGRLSEGGTL 687

Query: 71  SSAI 74
            S +
Sbjct: 688 PSVL 691

Hormone dependent protease required for epithelial morphogenesis, including the formation of bristles, legs, and wings. Has a dual function, detaches imaginal disk cells from extracellular matrices through its extracellular proteolytic domain and transmits an outside-to-inside signal to its intracellular domain to modify the cytoskeleton during morphogenesis.

Drosophila melanogaster (taxid: 7227)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: -

>sp|Q9GLP2|PROC_PIG Vitamin K-dependent protein C OS=Sus scrofa GN=PROC PE=2 SV=1

 Score = 60.1 bits (144), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 5/82 (6%)

Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD-----QTVKLVGKSATV 58
           L+ ++  VHP Y+ S   ND+AL+++ +   F Q I+P+CLPD     + +  VG+   V
Sbjct: 282 LDIKEFLVHPNYTRSTSDNDIALLRLAEPATFSQTIVPICLPDSGLSERELTRVGQETVV 341

Query: 59  AGWGRTRHASSLSSAIPTYVSI 80
            GWG    A +  S I  ++ +
Sbjct: 342 TGWGYRSEAKTNRSFILNFIKV 363

Protein C is a vitamin K-dependent serine protease that regulates blood coagulation by inactivating factors Va and VIIIa in the presence of calcium ions and phospholipids.

Sus scrofa (taxid: 9823)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 6

EC: 9

>sp|Q28278|PROC_CANFA Vitamin K-dependent protein C OS=Canis familiaris GN=PROC PE=2 SV=2

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 5/82 (6%)

Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD-----QTVKLVGKSATV 58
           ++ ++  +HP YS S   ND+AL+ + +  +F Q I+P+CLPD     + +  VG+   V
Sbjct: 279 VDIKEVLIHPNYSKSTTDNDIALLHLAQPAIFSQTIVPICLPDSGLAERELTQVGQETVV 338

Query: 59  AGWGRTRHASSLSSAIPTYVSI 80
            GWG         + +  +++I
Sbjct: 339 TGWGYRSETKRNRTFVLNFINI 360

Protein C is a vitamin K-dependent serine protease that regulates blood coagulation by inactivating factors Va and VIIIa in the presence of calcium ions and phospholipids.

Canis familiaris (taxid: 9615)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 6

EC: 9

>sp|P00745|PROC_BOVIN Vitamin K-dependent protein C (Fragment) OS=Bos taurus GN=PROC PE=1 SV=1

 Score = 56.2 bits (134), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 5/64 (7%)

Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD-----QTVKLVGKSATV 58
           L+ ++  +HP Y+ S   ND+AL+++ K     Q I+P+CLPD     + +  VG+   V
Sbjct: 279 LDIKEVIIHPNYTKSTSDNDIALLRLAKPATLSQTIVPICLPDSGLSERKLTQVGQETVV 338

Query: 59  AGWG 62
            GWG
Sbjct: 339 TGWG 342

Protein C is a vitamin K-dependent serine protease that regulates blood coagulation by inactivating factors Va and VIIIa in the presence of calcium ions and phospholipids.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 6

EC: 9

>sp|P04070|PROC_HUMAN Vitamin K-dependent protein C OS=Homo sapiens GN=PROC PE=1 SV=1

 Score = 55.8 bits (133), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 5/64 (7%)

Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD-----QTVKLVGKSATV 58
           L+ ++ FVHP YS S   ND+AL+ + +     Q I+P+CLPD     + +   G+   V
Sbjct: 280 LDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQETLV 339

Query: 59  AGWG 62
            GWG
Sbjct: 340 TGWG 343

Protein C is a vitamin K-dependent serine protease that regulates blood coagulation by inactivating factors Va and VIIIa in the presence of calcium ions and phospholipids.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 6

EC: 9

>sp|Q28661|PROC_RABIT Vitamin K-dependent protein C (Fragment) OS=Oryctolagus cuniculus GN=PROC PE=2 SV=1

 Score = 55.8 bits (133), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 9/86 (10%)

Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD-----QTVKLVGKSATV 58
           LN ++  +HP YS S   ND+AL+++ +     Q I+P+CLPD     + +   G+   V
Sbjct: 277 LNIQEVLIHPNYSRSTTDNDIALLRLAQPATLSQTIVPICLPDNGLAERELMQAGQETVV 336

Query: 59  AGWG----RTRHASSLSSAIPTYVSI 80
            GWG    R + A    + I  ++++
Sbjct: 337 TGWGYHSSREKEAKRNRTFILNFITV 362

Protein C is a vitamin K-dependent serine protease that regulates blood coagulation by inactivating factors Va and VIIIa in the presence of calcium ions and phospholipids.

Oryctolagus cuniculus (taxid: 9986)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 6

EC: 9

>sp|Q7Z5A4|PRS42_HUMAN Serine protease 42 OS=Homo sapiens GN=PRSS42 PE=2 SV=1

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 47/73 (64%), Gaps = 2/73 (2%)

Query: 4   LNTRQSFVHPQYSP-SDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKS-ATVAGW 61
           ++ +++FVHP++S  +  RND+AL+++   V F  +I P+C+P +  ++ G++   V GW
Sbjct: 146 VSVQRAFVHPKFSTVTTIRNDLALLQLQHPVNFTSNIQPICIPQENFQVEGRTRCWVTGW 205

Query: 62  GRTRHASSLSSAI 74
           G+T     L+S I
Sbjct: 206 GKTPEREKLASEI 218

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: -

>sp|Q28380|PROC_HORSE Vitamin K-dependent protein C (Fragment) OS=Equus caballus GN=PROC PE=2 SV=1

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 5/64 (7%)

Query: 4  LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD-----QTVKLVGKSATV 58
          L+ ++  +HP YS S   ND+AL+++ +   F Q I+P+CLPD     + +   G+   V
Sbjct: 7  LDIQEVIMHPNYSKSSSDNDIALLRLARPATFSQTIVPICLPDSGLSERELTQAGQETVV 66

Query: 59 AGWG 62
           GWG
Sbjct: 67 TGWG 70

Protein C is a vitamin K-dependent serine protease that regulates blood coagulation by inactivating factors Va and VIIIa in the presence of calcium ions and phospholipids.

Equus caballus (taxid: 9796)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 6

EC: 9

>sp|Q28412|PROC_FELCA Vitamin K-dependent protein C (Fragment) OS=Felis catus GN=PROC PE=2 SV=1

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 5/84 (5%)

Query: 2  FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD-----QTVKLVGKSA 56
            L+ ++  +HP YS S   ND+AL+++ +  +  Q I+P+CLPD     + +   G+  
Sbjct: 5  LDLDIKEVLMHPNYSRSTSDNDIALLRLAQPAILSQTIVPICLPDSGLAERELTQAGQET 64

Query: 57 TVAGWGRTRHASSLSSAIPTYVSI 80
           V GWG    A    + +  ++ +
Sbjct: 65 VVTGWGHRSEAKRNRTFVLNFIKV 88

Protein C is a vitamin K-dependent serine protease that regulates blood coagulation by inactivating factors Va and VIIIa in the presence of calcium ions and phospholipids.

Felis catus (taxid: 9685)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 6

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	132
328717744	602	PREDICTED: coagulation factor IX-like [A	0.537	0.117	0.675	4e-22
383857605	780	PREDICTED: uncharacterized protein LOC10	0.575	0.097	0.576	3e-21
157123330	570	serine protease [Aedes aegypti] gi|10888	0.515	0.119	0.642	5e-21
170049513	413	serine protease [Culex quinquefasciatus]	0.583	0.186	0.604	6e-21
158299684	248	AGAP008997-PA [Anopheles gambiae str. PE	0.537	0.286	0.647	7e-21
312383975	253	hypothetical protein AND_02726 [Anophele	0.537	0.280	0.647	7e-21
328776525	787	PREDICTED: hypothetical protein LOC41040	0.590	0.099	0.564	8e-21
350426707	792	PREDICTED: hypothetical protein LOC10074	0.590	0.098	0.551	1e-20
194753634	554	GF12720 [Drosophila ananassae] gi|190620	0.553	0.131	0.618	1e-20
340723576	793	PREDICTED: hypothetical protein LOC10065	0.590	0.098	0.551	1e-20

>gi|328717744|ref|XP_001943624.2| PREDICTED: coagulation factor IX-like [Acyrthosiphon pisum]

 Score =  109 bits (272), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 50/74 (67%), Positives = 57/74 (77%), Gaps = 3/74 (4%)

Query: 3   KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWG 62
           + N  +  VHPQYSP+DFRNDVAL+KID DV +KQHIIPVCLP    KLVGK+ATVAGWG
Sbjct: 435 EFNVERKEVHPQYSPTDFRNDVALVKIDHDVTYKQHIIPVCLPSSAAKLVGKTATVAGWG 494

Query: 63  RTRHASSLSSAIPT 76
           RTRH     S +PT
Sbjct: 495 RTRHG---VSTVPT 505

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383857605|ref|XP_003704295.1| PREDICTED: uncharacterized protein LOC100882186 [Megachile rotundata]

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/78 (57%), Positives = 59/78 (75%)

Query: 3   KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWG 62
           + N  +  VHPQYSP+DFRNDVAL+K+ + V FKQHI+PVCLP + +KL G++ATVAGWG
Sbjct: 613 EFNIERKEVHPQYSPTDFRNDVALVKLSRTVAFKQHIVPVCLPAKNLKLSGRTATVAGWG 672

Query: 63  RTRHASSLSSAIPTYVSI 80
           RTRH  S + +I   V +
Sbjct: 673 RTRHGQSSAPSILQEVDV 690

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157123330|ref|XP_001660119.1| serine protease [Aedes aegypti] gi|108884512|gb|EAT48737.1| AAEL000238-PA [Aedes aegypti]

 Score =  105 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 45/70 (64%), Positives = 55/70 (78%)

Query: 11  VHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSL 70
           VHP YSPSDFRND+AL+K+D+ VVF+QHI+PVCLP +  KLVGK ATVAGWGRTRH  S 
Sbjct: 407 VHPSYSPSDFRNDIALVKLDRKVVFRQHILPVCLPPKQTKLVGKMATVAGWGRTRHGQST 466

Query: 71  SSAIPTYVSI 80
             ++   V +
Sbjct: 467 VPSVLQEVDV 476

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170049513|ref|XP_001857207.1| serine protease [Culex quinquefasciatus] gi|167871326|gb|EDS34709.1| serine protease [Culex quinquefasciatus]

 Score =  105 bits (262), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 4/81 (4%)

Query: 11  VHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSL 70
           VHP YSPSDFRND+AL+K+D+ VVF+QHI+PVCLP +  KLVGK ATVAGWGRTRH  S 
Sbjct: 254 VHPSYSPSDFRNDIALVKLDRKVVFRQHILPVCLPPKQTKLVGKMATVAGWGRTRHGQST 313

Query: 71  SSAIPTYVSISNDVALIKIDK 91
             ++   V    DV +I  D+
Sbjct: 314 VPSVLQEV----DVEVIPNDR 330

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158299684|ref|XP_319746.4| AGAP008997-PA [Anopheles gambiae str. PEST] gi|157013635|gb|EAA43365.4| AGAP008997-PA [Anopheles gambiae str. PEST]

 Score =  105 bits (262), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 46/71 (64%), Positives = 57/71 (80%)

Query: 11  VHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSL 70
           VHP YSPSDFRND+AL+K+D+ VVF+QHI+PVCLP ++VKLVGK ATVAGWGRTRH  S 
Sbjct: 86  VHPNYSPSDFRNDIALVKLDRKVVFRQHILPVCLPPKSVKLVGKMATVAGWGRTRHGQST 145

Query: 71  SSAIPTYVSIS 81
             ++   V + 
Sbjct: 146 VPSVLQEVDVE 156

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312383975|gb|EFR28831.1| hypothetical protein AND_02726 [Anopheles darlingi]

 Score =  105 bits (262), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 46/71 (64%), Positives = 57/71 (80%)

Query: 11  VHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSL 70
           VHP YSPSDFRND+AL+K+D+ VVF+QHI+PVCLP ++VKLVGK ATVAGWGRTRH  S 
Sbjct: 91  VHPNYSPSDFRNDIALVKLDRKVVFRQHILPVCLPPKSVKLVGKMATVAGWGRTRHGQST 150

Query: 71  SSAIPTYVSIS 81
             ++   V + 
Sbjct: 151 VPSVLQEVDVE 161

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328776525|ref|XP_393882.3| PREDICTED: hypothetical protein LOC410402 isoform 1 [Apis mellifera]

 Score =  105 bits (261), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 44/78 (56%), Positives = 58/78 (74%)

Query: 3   KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWG 62
           + N  +  VHPQYSP+DFRNDVAL+K+ + V FKQHI+PVCLP + +K+ G++ATVAGWG
Sbjct: 620 EFNVERKEVHPQYSPTDFRNDVALVKLSRTVAFKQHIVPVCLPAKNLKISGRTATVAGWG 679

Query: 63  RTRHASSLSSAIPTYVSI 80
           RTRH  S +  I   V +
Sbjct: 680 RTRHGQSSAPTILQEVDV 697

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350426707|ref|XP_003494519.1| PREDICTED: hypothetical protein LOC100740075 [Bombus impatiens]

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/78 (55%), Positives = 59/78 (75%)

Query: 3   KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWG 62
           + N  +  VHPQYSP+DFRNDVAL+K+ + V FKQHI+PVCLP + +K+ G++ATVAGWG
Sbjct: 625 EFNVERKEVHPQYSPTDFRNDVALVKLSRTVAFKQHIVPVCLPAKNLKISGRTATVAGWG 684

Query: 63  RTRHASSLSSAIPTYVSI 80
           RTRH  S + ++   V +
Sbjct: 685 RTRHGQSSAPSVLQEVDV 702

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194753634|ref|XP_001959115.1| GF12720 [Drosophila ananassae] gi|190620413|gb|EDV35937.1| GF12720 [Drosophila ananassae]

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/76 (61%), Positives = 58/76 (76%), Gaps = 3/76 (3%)

Query: 11  VHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSL 70
           VHP Y+P+DF+NDVALI++D++VV+KQHIIPVCLP  + KL GK ATVAGWGRTRH  S 
Sbjct: 390 VHPHYNPADFKNDVALIRLDRNVVYKQHIIPVCLPPPSTKLTGKMATVAGWGRTRHGQST 449

Query: 71  SSAIPTYVS---ISND 83
             ++   V    ISND
Sbjct: 450 VPSVLQEVDVEVISND 465

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340723576|ref|XP_003400165.1| PREDICTED: hypothetical protein LOC100652014 [Bombus terrestris]

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/78 (55%), Positives = 59/78 (75%)

Query: 3   KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWG 62
           + N  +  VHPQYSP+DFRNDVAL+K+ + V FKQHI+PVCLP + +K+ G++ATVAGWG
Sbjct: 626 EFNVERKEVHPQYSPTDFRNDVALVKLSRTVAFKQHIVPVCLPAKNLKISGRTATVAGWG 685

Query: 63  RTRHASSLSSAIPTYVSI 80
           RTRH  S + ++   V +
Sbjct: 686 RTRHGQSSAPSVLQEVDV 703

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	132
FB|FBgn0033362	561	CG8172 [Drosophila melanogaste	0.553	0.130	0.631	2.6e-20
UNIPROTKB|F1SUG2	632	PRSS22 "Uncharacterized protei	0.386	0.080	0.396	2.2e-14
UNIPROTKB|I3LDL1	1047	TMPRSS9 "Uncharacterized prote	0.590	0.074	0.341	1.9e-13
UNIPROTKB|E1B9Z9	1095	TMPRSS9 "Uncharacterized prote	0.507	0.061	0.367	4.3e-13
RGD|1309581	1061	Tmprss9 "transmembrane proteas	0.590	0.073	0.341	1.1e-12
UNIPROTKB|F1PXI5	581	PRSS42 "Uncharacterized protei	0.507	0.115	0.333	1.6e-05
FB|FBgn0033359	1693	CG8213 [Drosophila melanogaste	0.530	0.041	0.4	3.5e-12
UNIPROTKB|I3L9G9	655	I3L9G9 "Uncharacterized protei	0.719	0.145	0.265	2.5e-05
ZFIN|ZDB-GENE-030131-1171	459	ctrb1 "chymotrypsinogen B1" [D	0.446	0.128	0.35	0.00011
UNIPROTKB|Q7Z410	1059	TMPRSS9 "Transmembrane proteas	0.507	0.063	0.323	3.1e-11

FB|FBgn0033362 CG8172 [Drosophila melanogaster (taxid:7227)]

 Score = 248 (92.4 bits), Expect = 2.6e-20, P = 2.6e-20
 Identities = 48/76 (63%), Positives = 57/76 (75%)

Query:    11 VHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSL 70
             VHP Y+P+DF NDVALI++D++VV+KQHIIPVCLP  T KL GK ATVAGWGRTRH  S 
Sbjct:   398 VHPHYNPADFVNDVALIRLDRNVVYKQHIIPVCLPPSTTKLTGKMATVAGWGRTRHGQST 457

Query:    71 SSAIPTYVS---ISND 83
               ++   V    ISND
Sbjct:   458 VPSVLQEVDVEVISND 473

GO:0006508 "proteolysis" evidence=IEA;NAS

GO:0004252 "serine-type endopeptidase activity" evidence=IEA;NAS

UNIPROTKB|F1SUG2 PRSS22 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 122 (48.0 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
 Identities = 21/53 (39%), Positives = 35/53 (66%)

Query:    12 HPQYSPSD-FRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV-GKSATVAGWG 62
             HP YS  +  R D+AL+ +++ + F + ++P+CLPD +V+L  G    +AGWG
Sbjct:   128 HPVYSWKEGSRADIALVHLERSIQFSERVLPICLPDSSVRLPPGTDCWIAGWG 180

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

UNIPROTKB|I3LDL1 TMPRSS9 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 143 (55.4 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
 Identities = 27/79 (34%), Positives = 48/79 (60%)

Query:     3 KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGW 61
             K+  R++ +HPQY+PS    DVA++++ + +VF +++ PVCLP    K  VG+   ++GW
Sbjct:   560 KMGLRRAVLHPQYNPSILDFDVAVLELARPLVFNKYVQPVCLPLAIQKFPVGRKCMISGW 619

Query:    62 GRTRHASSLSSAIPTYVSI 80
             G T+  ++    I    S+
Sbjct:   620 GNTQEGNATKPDILQRASV 638

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

UNIPROTKB|E1B9Z9 TMPRSS9 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 139 (54.0 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
 Identities = 25/68 (36%), Positives = 44/68 (64%)

Query:     3 KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGW 61
             K+  R+  +HPQY+PS    DVA++++ + +VF +++ PVCLP    K  VG+   ++GW
Sbjct:   606 KVGLRRVVLHPQYNPSILDFDVAVLELARPLVFNKYVQPVCLPLAIQKFPVGRKCVISGW 665

Query:    62 GRTRHASS 69
             G T+  ++
Sbjct:   666 GNTQEGNA 673

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

RGD|1309581 Tmprss9 "transmembrane protease, serine 9" [Rattus norvegicus (taxid:10116)]

 Score = 128 (50.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 27/79 (34%), Positives = 44/79 (55%)

Query:     3 KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGW 61
             KL  R   +HP+Y+P     DVAL+++ + +VF ++I PVCLP    K  VG+   ++GW
Sbjct:   574 KLGLRSVALHPRYNPGILDFDVALLELAQPLVFNKYIQPVCLPLAIHKFPVGRKCMISGW 633

Query:    62 GRTRHASSLSSAIPTYVSI 80
             G  +  ++    I    S+
Sbjct:   634 GNMQEGNATKPDILQKASV 652

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

UNIPROTKB|F1PXI5 PRSS42 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 111 (44.1 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 23/69 (33%), Positives = 35/69 (50%)

Query:     3 KLNTRQSFVHPQYSPSDF-RNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAG 60
             K+  +   +H  Y+P     ND+AL+ ++  V F  HI PVCLP++   +  G    V G
Sbjct:   413 KIPVQDIVIHKDYNPLGLIENDIALVLLEFPVNFSTHIHPVCLPEKAFLVQAGTECWVTG 472

Query:    61 WGRTRHASS 69
             WG+     S
Sbjct:   473 WGKLSEKDS 481

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

FB|FBgn0033359 CG8213 [Drosophila melanogaster (taxid:7227)]

 Score = 179 (68.1 bits), Expect = 3.5e-12, P = 3.5e-12
 Identities = 28/70 (40%), Positives = 44/70 (62%)

Query:     5 NTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRT 64
             N ++  VH QY P+ F ND+AL+++D  V F  HI+P+C+P+      G+ ATV GWGR 
Sbjct:  1526 NVKRVIVHRQYDPATFENDLALLELDSPVQFDTHIVPICMPNDVADFTGRMATVTGWGRL 1585

Query:    65 RHASSLSSAI 74
             ++   + S +
Sbjct:  1586 KYGGGVPSVL 1595

GO:0004252 "serine-type endopeptidase activity" evidence=IEA;NAS

GO:0006508 "proteolysis" evidence=IEA;NAS

UNIPROTKB|I3L9G9 I3L9G9 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 110 (43.8 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 26/98 (26%), Positives = 51/98 (52%)

Query:    11 VHPQYSPSDF-RNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
             +HP+Y    F  +D+AL++++  VV  +++ P+CLP+    L VG    V GWG+ +   
Sbjct:   469 MHPKYWGRTFILSDIALLQLETPVVISKYVQPICLPEPNYNLKVGTQCWVTGWGQVKQRF 528

Query:    69 SLSSAIPTYVSISNDVALIKIDKDVVF-KQHIIPVCLP 105
             S +  +   +  +    +     D ++ K+ +IP  +P
Sbjct:   529 SANFTMTPELQEAEVFIMDNKRCDRIYRKKSLIPRFVP 566

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

ZFIN|ZDB-GENE-030131-1171 ctrb1 "chymotrypsinogen B1" [Danio rerio (taxid:7955)]

 Score = 102 (41.0 bits), Expect = 0.00011, P = 0.00011
 Identities = 21/60 (35%), Positives = 29/60 (48%)

Query:     8 QSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATV-AGWGRTRH 66
             +S  HP Y+     ND+ LIK+        H+ PVCL +      G    V +GWG TR+
Sbjct:   301 KSIKHPNYNSFTINNDILLIKLATPAKINTHVSPVCLAETNDNFPGGMKCVTSGWGLTRY 360

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0008233 "peptidase activity" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0008236 "serine-type peptidase activity" evidence=IEA

UNIPROTKB|Q7Z410 TMPRSS9 "Transmembrane protease serine 9" [Homo sapiens (taxid:9606)]

 Score = 120 (47.3 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
 Identities = 22/68 (32%), Positives = 40/68 (58%)

Query:     3 KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGW 61
             K+  R+  +HP Y+P     D+A++++   + F ++I PVCLP    K  VG+   ++GW
Sbjct:   572 KIGLRRVVLHPLYNPGILDFDLAVLELASPLAFNKYIQPVCLPLAIQKFPVGRKCMISGW 631

Query:    62 GRTRHASS 69
             G T+  ++
Sbjct:   632 GNTQEGNA 639

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	132
cd00190	232	cd00190, Tryp_SPc, Trypsin-like serine protease; M	1e-18
smart00020	229	smart00020, Tryp_SPc, Trypsin-like serine protease	8e-17
cd00190	232	cd00190, Tryp_SPc, Trypsin-like serine protease; M	6e-12
pfam00089	218	pfam00089, Trypsin, Trypsin	8e-12
smart00020	229	smart00020, Tryp_SPc, Trypsin-like serine protease	9e-11
pfam00089	218	pfam00089, Trypsin, Trypsin	6e-09

>gnl|CDD|238113 cd00190, Tryp_SPc, Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms

 Score = 78.1 bits (193), Expect = 1e-18
 Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 3   KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGW 61
            +  ++  VHP Y+PS + ND+AL+K+ + V    ++ P+CLP     L  G + TV+GW
Sbjct: 70  VIKVKKVIVHPNYNPSTYDNDIALLKLKRPVTLSDNVRPICLPSSGYNLPAGTTCTVSGW 129

Query: 62  GRTRHASSLSS 72
           GRT     L  
Sbjct: 130 GRTSEGGPLPD 140

Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues. Length = 232

>gnl|CDD|214473 smart00020, Tryp_SPc, Trypsin-like serine protease

 Score = 73.1 bits (180), Expect = 8e-17
 Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%)

Query: 3   KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGW 61
            +   +  +HP Y+PS + ND+AL+K+ + V    ++ P+CLP     +  G + TV+GW
Sbjct: 70  VIKVSKVIIHPNYNPSTYDNDIALLKLKEPVTLSDNVRPICLPSSNYNVPAGTTCTVSGW 129

Query: 62  GRTRHASSLSSAIPTYVSI 80
           GRT   +         V++
Sbjct: 130 GRTSEGAGSLPDTLQEVNV 148

Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues. Length = 229

>gnl|CDD|238113 cd00190, Tryp_SPc, Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms

 Score = 60.0 bits (146), Expect = 6e-12
 Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)

Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 125
           +  ND+AL+K+ + V    ++ P+CLP     L  G + TV+GWGRT 
Sbjct: 86  TYDNDIALLKLKRPVTLSDNVRPICLPSSGYNLPAGTTCTVSGWGRTS 133

Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues. Length = 232

>gnl|CDD|215708 pfam00089, Trypsin, Trypsin

 Score = 59.4 bits (144), Expect = 8e-12
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)

Query: 3   KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGW 61
           K + ++  VHP Y+P    ND+AL+K+   V     + P+CLP  +  L VG + TV+GW
Sbjct: 68  KFDVKKVIVHPNYNPDTD-NDIALLKLKSPVTLGDTVRPICLPTASSDLPVGTTCTVSGW 126

Query: 62  GRTRH 66
           G T+ 
Sbjct: 127 GNTKT 131

Length = 218

>gnl|CDD|214473 smart00020, Tryp_SPc, Trypsin-like serine protease

 Score = 56.9 bits (138), Expect = 9e-11
 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 1/48 (2%)

Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 125
           +  ND+AL+K+ + V    ++ P+CLP     +  G + TV+GWGRT 
Sbjct: 86  TYDNDIALLKLKEPVTLSDNVRPICLPSSNYNVPAGTTCTVSGWGRTS 133

Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues. Length = 229

>gnl|CDD|215708 pfam00089, Trypsin, Trypsin

 Score = 51.7 bits (124), Expect = 6e-09
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 82  NDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGHKE 131
           ND+AL+K+   V     + P+CLP  +  L VG + TV+GWG T+  G  +
Sbjct: 86  NDIALLKLKSPVTLGDTVRPICLPTASSDLPVGTTCTVSGWGNTKTLGLPD 136

Length = 218

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	132
KOG3627|consensus	256		99.68
cd00190	232	Tryp_SPc Trypsin-like serine protease; Many of the	99.57
smart00020	229	Tryp_SPc Trypsin-like serine protease. Many of the	99.52
PF00089	220	Trypsin: Trypsin; InterPro: IPR001254 In the MEROP	99.31
KOG3627|consensus	256		97.73
cd00190	232	Tryp_SPc Trypsin-like serine protease; Many of the	97.69
smart00020	229	Tryp_SPc Trypsin-like serine protease. Many of the	97.21
PF00089	220	Trypsin: Trypsin; InterPro: IPR001254 In the MEROP	97.05
COG5640	413	Secreted trypsin-like serine protease [Posttransla	96.85
PF09342	267	DUF1986: Domain of unknown function (DUF1986); Int	95.37
PF03761	282	DUF316: Domain of unknown function (DUF316) ; Inte	94.35

>KOG3627|consensus

Probab=99.68  E-value=6.9e-16  Score=99.72  Aligned_cols=123  Identities=27%  Similarity=0.450  Sum_probs=91.0

Q ss_pred             EEeeeEEEeCCCCCCCCCC-CceEEEEeCCCeeeCCCeeeeeecCCCC---cccCCcEEEeccCccccCCCcccccceee
Q psy15292          3 KLNTRQSFVHPQYSPSDFR-NDVALIKIDKDVVFKQHIIPVCLPDQTV---KLVGKSATVAGWGRTRHASSLSSAIPTYV   78 (132)
Q Consensus         3 ~~~v~~~~~h~~y~~~~~~-~diall~l~~~~~~~~~~~~~cl~~~~~---~~~g~~~~~~GwG~~~~~~~~~~~~l~~~   78 (132)
                      ...+.++++||+|+..... ||||||+|.+++.|++.++|+|||....   ...+..|.++|||.+..........++++
T Consensus        86 ~~~v~~~i~H~~y~~~~~~~nDiall~l~~~v~~~~~i~piclp~~~~~~~~~~~~~~~v~GWG~~~~~~~~~~~~L~~~  165 (256)
T KOG3627|consen   86 VGDVEKIIVHPNYNPRTLENNDIALLRLSEPVTFSSHIQPICLPSSADPYFPPGGTTCLVSGWGRTESGGGPLPDTLQEV  165 (256)
T ss_pred             hceeeEEEECCCCCCCCCCCCCEEEEEECCCcccCCcccccCCCCCcccCCCCCCCEEEEEeCCCcCCCCCCCCceeEEE
Confidence            3447788899999998877 9999999999999999999999985543   22457899999999876533446667754


Q ss_pred             e---ccCCeEEEEeccc--e----ee-c--cCeeeeecCCCCCCC--C----CceEEEEeecccC
Q psy15292         79 S---ISNDVALIKIDKD--V----VF-K--QHIIPVCLPDQTVKL--V----GKSATVAGWGRTR  125 (132)
Q Consensus        79 ~---~~~d~c~~~~~~~--~----~~-~--~~v~~icl~~~~~~~--~----g~~~~v~gwg~~~  125 (132)
                      .   ++++.|...+...  +    .. .  ......|.++++.++  .    ...+.|..||...
T Consensus       166 ~v~i~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGGPLv~~~~~~~~~~GivS~G~~~  230 (256)
T KOG3627|consen  166 DVPIISNSECRRAYGGLGTITDTMLCAGGPEGGKDACQGDSGGPLVCEDNGRWVLVGIVSWGSGG  230 (256)
T ss_pred             EEeEcChhHhcccccCccccCCCEEeeCccCCCCccccCCCCCeEEEeeCCcEEEEEEEEecCCC
Confidence            4   7778898776542  1    11 1  122336888888777  3    4889999999863

>cd00190 Tryp_SPc Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms

Probab=99.57  E-value=2e-14  Score=91.20  Aligned_cols=122  Identities=27%  Similarity=0.507  Sum_probs=84.9

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCC-cccCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTV-KLVGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~-~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.++++||+|+.....+|||||+|+.++.++..++|+||+.... ...+..+.+.|||...... .....++... 
T Consensus        69 ~~~~v~~~~~hp~y~~~~~~~DiAll~L~~~~~~~~~v~picl~~~~~~~~~~~~~~~~G~g~~~~~~-~~~~~~~~~~~  147 (232)
T cd00190          69 QVIKVKKVIVHPNYNPSTYDNDIALLKLKRPVTLSDNVRPICLPSSGYNLPAGTTCTVSGWGRTSEGG-PLPDVLQEVNV  147 (232)
T ss_pred             EEEEEEEEEECCCCCCCCCcCCEEEEEECCcccCCCcccceECCCccccCCCCCEEEEEeCCcCCCCC-CCCceeeEEEe
Confidence            356789999999999988999999999999999999999999998742 2267889999999875542 2233444433 


Q ss_pred             --ccCCeEEEEeccceee-ccC--------eeeeecCCCCCCC--C----CceEEEEeeccc
Q psy15292         80 --ISNDVALIKIDKDVVF-KQH--------IIPVCLPDQTVKL--V----GKSATVAGWGRT  124 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~~-~~~--------v~~icl~~~~~~~--~----g~~~~v~gwg~~  124 (132)
                        ++.+.|...+...... ...        ....|.++++.++  .    ...+.|..||..
T Consensus       148 ~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~~~~~lvGI~s~g~~  209 (232)
T cd00190         148 PIVSNAECKRAYSYGGTITDNMLCAGGLEGGKDACQGDSGGPLVCNDNGRGVLVGIVSWGSG  209 (232)
T ss_pred             eeECHHHhhhhccCcccCCCceEeeCCCCCCCccccCCCCCcEEEEeCCEEEEEEEEehhhc
Confidence              5666776554420000 111        2346777777666  3    456677777653

Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues.

>smart00020 Tryp_SPc Trypsin-like serine protease

Probab=99.52  E-value=2.6e-13  Score=86.09  Aligned_cols=122  Identities=25%  Similarity=0.492  Sum_probs=85.0

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCC-cccCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTV-KLVGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~-~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|..++.||+|+.....+|||||+|+.++.+++.++|+||+.... ...+..+.+.|||............++... 
T Consensus        69 ~~~~v~~~~~~p~~~~~~~~~DiAll~L~~~i~~~~~~~pi~l~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~  148 (229)
T smart00020       69 QVIKVSKVIIHPNYNPSTYDNDIALLKLKSPVTLSDNVRPICLPSSNYNVPAGTTCTVSGWGRTSEGAGSLPDTLQEVNV  148 (229)
T ss_pred             eEEeeEEEEECCCCCCCCCcCCEEEEEECcccCCCCceeeccCCCcccccCCCCEEEEEeCCCCCCCCCcCCCEeeEEEE
Confidence            457899999999999888999999999999999999999999997632 226788999999987542222233444433 


Q ss_pred             --ccCCeEEEEeccc-eeeccC--------eeeeecCCCCCCC--CC---ceEEEEeecc
Q psy15292         80 --ISNDVALIKIDKD-VVFKQH--------IIPVCLPDQTVKL--VG---KSATVAGWGR  123 (132)
Q Consensus        80 --~~~d~c~~~~~~~-~~~~~~--------v~~icl~~~~~~~--~g---~~~~v~gwg~  123 (132)
                        +..+.|...+... ......        ....|.++++.++  .+   ..+.|..||.
T Consensus       149 ~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsG~pl~~~~~~~~l~Gi~s~g~  208 (229)
T smart00020      149 PIVSNATCRRAYSGGGAITDNMLCAGGLEGGKDACQGDSGGPLVCNDGRWVLVGIVSWGS  208 (229)
T ss_pred             EEeCHHHhhhhhccccccCCCcEeecCCCCCCcccCCCCCCeeEEECCCEEEEEEEEECC
Confidence              5666677544321 111111        2346777877776  34   5777777886

Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues.

>PF00089 Trypsin: Trypsin; InterPro: IPR001254 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=99.31  E-value=5.6e-12  Score=79.41  Aligned_cols=119  Identities=28%  Similarity=0.539  Sum_probs=81.6

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCc-ccCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK-LVGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~-~~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.+++.||+|+.....+|||||+|++++.+.+.+.|+|++..... ..+..+.+.|||......  ....++... 
T Consensus        67 ~~~~v~~~~~h~~~~~~~~~~DiAll~L~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~~~~--~~~~~~~~~~  144 (220)
T PF00089_consen   67 QTIKVSKIIIHPKYDPSTYDNDIALLKLDRPITFGDNIQPICLPSAGSDPNVGTSCIVVGWGRTSDNG--YSSNLQSVTV  144 (220)
T ss_dssp             EEEEEEEEEEETTSBTTTTTTSEEEEEESSSSEHBSSBEESBBTSTTHTTTTTSEEEEEESSBSSTTS--BTSBEEEEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccccc
Confidence            4678999999999999889999999999999999999999999985432 368889999999865543  223333322 


Q ss_pred             --ccCCeEEEEecc----ceee-cc-CeeeeecCCCCCCC--CCc-eEEEEeec
Q psy15292         80 --ISNDVALIKIDK----DVVF-KQ-HIIPVCLPDQTVKL--VGK-SATVAGWG  122 (132)
Q Consensus        80 --~~~d~c~~~~~~----~~~~-~~-~v~~icl~~~~~~~--~g~-~~~v~gwg  122 (132)
                        ++++.|...+..    .... .. .-...|-++++.++  .+. ...|..+|
T Consensus       145 ~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~g~sG~pl~~~~~~lvGI~s~~  198 (220)
T PF00089_consen  145 PVVSRKTCRSSYNDNLTPNMICAGSSGSGDACQGDSGGPLICNNNYLVGIVSFG  198 (220)
T ss_dssp             EEEEHHHHHHHTTTTSTTTEEEEETTSSSBGGTTTTTSEEEETTEEEEEEEEEE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccceeeecceeeec
Confidence              444455443211    1110 11 11356778887777  455 67777776

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine proteases belong to the MEROPS peptidase family S1 (chymotrypsin family, clan PA(S))and to peptidase family S6 (Hap serine peptidases). The chymotrypsin family is almost totally confined to animals, although trypsin-like enzymes are found in actinomycetes of the genera Streptomyces and Saccharopolyspora, and in the fungus Fusarium oxysporum []. The enzymes are inherently secreted, being synthesised with a signal peptide that targets them to the secretory pathway. Animal enzymes are either secreted directly, packaged into vesicles for regulated secretion, or are retained in leukocyte granules []. The Hap family, 'Haemophilus adhesion and penetration', are proteins that play a role in the interaction with human epithelial cells. The serine protease activity is localized at the N-terminal domain, whereas the binding domain is in the C-terminal region. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 1SPJ_A 1A5I_A 2ZGH_A 2ZKS_A 2ZGJ_A 2ZGC_A 2ODP_A 2I6Q_A 2I6S_A 2ODQ_A ....

>KOG3627|consensus

Probab=97.73  E-value=7.2e-05  Score=48.49  Aligned_cols=55  Identities=38%  Similarity=0.814  Sum_probs=43.3

Q ss_pred             ccceeee--cc-CCeEEEEeccceeeccCeeeeecCCCCC---CCCCceEEEEeecccCcC
Q psy15292         73 AIPTYVS--IS-NDVALIKIDKDVVFKQHIIPVCLPDQTV---KLVGKSATVAGWGRTRHA  127 (132)
Q Consensus        73 ~~l~~~~--~~-~d~c~~~~~~~~~~~~~v~~icl~~~~~---~~~g~~~~v~gwg~~~~~  127 (132)
                      .|..|..  .. +|++++++..++.+++.+.++|||....   ...+..|.++|||++...
T Consensus        94 ~H~~y~~~~~~~nDiall~l~~~v~~~~~i~piclp~~~~~~~~~~~~~~~v~GWG~~~~~  154 (256)
T KOG3627|consen   94 VHPNYNPRTLENNDIALLRLSEPVTFSSHIQPICLPSSADPYFPPGGTTCLVSGWGRTESG  154 (256)
T ss_pred             ECCCCCCCCCCCCCEEEEEECCCcccCCcccccCCCCCcccCCCCCCCEEEEEeCCCcCCC
Confidence            3445544  34 9999999999999999999999985433   225699999999998765

>cd00190 Tryp_SPc Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms

Probab=97.69  E-value=0.00011  Score=46.54  Aligned_cols=48  Identities=40%  Similarity=0.872  Sum_probs=41.4

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~  127 (132)
                      ..+|++++++..++.++..+.++||+...... .+..+.+.|||.....
T Consensus        87 ~~~DiAll~L~~~~~~~~~v~picl~~~~~~~~~~~~~~~~G~g~~~~~  135 (232)
T cd00190          87 YDNDIALLKLKRPVTLSDNVRPICLPSSGYNLPAGTTCTVSGWGRTSEG  135 (232)
T ss_pred             CcCCEEEEEECCcccCCCcccceECCCccccCCCCCEEEEEeCCcCCCC
Confidence            57899999999999999999999999885333 7899999999997654

Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues.

>smart00020 Tryp_SPc Trypsin-like serine protease

Probab=97.21  E-value=0.0009  Score=42.38  Aligned_cols=47  Identities=38%  Similarity=0.864  Sum_probs=40.2

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCc
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH  126 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~  126 (132)
                      ..+|++++++..++.+++.+.++|++...... .+..+.+.|||....
T Consensus        87 ~~~DiAll~L~~~i~~~~~~~pi~l~~~~~~~~~~~~~~~~g~g~~~~  134 (229)
T smart00020       87 YDNDIALLKLKSPVTLSDNVRPICLPSSNYNVPAGTTCTVSGWGRTSE  134 (229)
T ss_pred             CcCCEEEEEECcccCCCCceeeccCCCcccccCCCCEEEEEeCCCCCC
Confidence            67899999999999999999999999863222 789999999998764

Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues.

>PF00089 Trypsin: Trypsin; InterPro: IPR001254 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.05  E-value=0.0022  Score=40.26  Aligned_cols=49  Identities=45%  Similarity=0.908  Sum_probs=41.8

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++.+.+.+.++|++.....+ .+..|.+.|||.....+
T Consensus        85 ~~~DiAll~L~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~~~~  134 (220)
T PF00089_consen   85 YDNDIALLKLDRPITFGDNIQPICLPSAGSDPNVGTSCIVVGWGRTSDNG  134 (220)
T ss_dssp             TTTSEEEEEESSSSEHBSSBEESBBTSTTHTTTTTSEEEEEESSBSSTTS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            46899999999999999999999999965433 78999999999976554

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine proteases belong to the MEROPS peptidase family S1 (chymotrypsin family, clan PA(S))and to peptidase family S6 (Hap serine peptidases). The chymotrypsin family is almost totally confined to animals, although trypsin-like enzymes are found in actinomycetes of the genera Streptomyces and Saccharopolyspora, and in the fungus Fusarium oxysporum []. The enzymes are inherently secreted, being synthesised with a signal peptide that targets them to the secretory pathway. Animal enzymes are either secreted directly, packaged into vesicles for regulated secretion, or are retained in leukocyte granules []. The Hap family, 'Haemophilus adhesion and penetration', are proteins that play a role in the interaction with human epithelial cells. The serine protease activity is localized at the N-terminal domain, whereas the binding domain is in the C-terminal region. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 1SPJ_A 1A5I_A 2ZGH_A 2ZKS_A 2ZGJ_A 2ZGC_A 2ODP_A 2I6Q_A 2I6S_A 2ODQ_A ....

>COG5640 Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones]

Probab=96.85  E-value=0.0064  Score=41.25  Aligned_cols=33  Identities=27%  Similarity=0.555  Sum_probs=29.0

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCee
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVV   34 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~   34 (132)
                      ++..|..++.|+-|.+.++.||||+++|.++..
T Consensus       104 ~rg~vr~i~~~efY~~~n~~ND~Av~~l~~~a~  136 (413)
T COG5640         104 ERGHVRTIYVHEFYSPGNLGNDIAVLELARAAS  136 (413)
T ss_pred             cCcceEEEeeecccccccccCcceeeccccccc
Confidence            356788999999999999999999999998654

>PF09342 DUF1986: Domain of unknown function (DUF1986); InterPro: IPR015420 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=95.37  E-value=0.046  Score=35.34  Aligned_cols=44  Identities=16%  Similarity=0.384  Sum_probs=33.8

Q ss_pred             CCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCc
Q psy15292         20 FRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGR   63 (132)
Q Consensus        20 ~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~   63 (132)
                      .+.+++|+.|++|+.|+++++|..||...... ....|...|-..
T Consensus        87 ~~S~v~LLHL~~~~~fTr~VlP~flp~~~~~~~~~~~CVAVg~d~  131 (267)
T PF09342_consen   87 PESNVLLLHLEQPANFTRYVLPTFLPETSNENESDDECVAVGHDD  131 (267)
T ss_pred             cccceeeeeecCcccceeeecccccccccCCCCCCCceEEEEccc
Confidence            36799999999999999999999998633222 344787777544

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain is found in serine endopeptidases belonging to MEROPS peptidase family S1A (clan PA). It is found in unusual mosaic proteins, which are encoded by the Drosophila nudel gene (see P98159 from SWISSPROT). Nudel is involved in defining embryonic dorsoventral polarity. Three proteases; ndl, gd and snk process easter to create active easter. Active easter defines cell identities along the dorsal-ventral continuum by activating the spz ligand for the Tl receptor in the ventral region of the embryo. Nudel, pipe and windbeutel together trigger the protease cascade within the extraembryonic perivitelline compartment which induces dorsoventral polarity of the Drosophila embryo [].

>PF03761 DUF316: Domain of unknown function (DUF316) ; InterPro: IPR005514 This is a family of uncharacterised proteins from Caenorhabditis elegans

Probab=94.35  E-value=0.85  Score=30.22  Aligned_cols=43  Identities=21%  Similarity=0.509  Sum_probs=32.3

Q ss_pred             CCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEecc
Q psy15292         17 PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGW   61 (132)
Q Consensus        17 ~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~Gw   61 (132)
                      .....++.+|++|+.+  +.....|+||+.+.... .++...+.|+
T Consensus       156 ~~~~~~~~mIlEl~~~--~~~~~~~~Cl~~~~~~~~~~~~~~~yg~  199 (282)
T PF03761_consen  156 NFNRPYSPMILELEED--FSKNVSPPCLADSSTNWEKGDEVDVYGF  199 (282)
T ss_pred             ccccccceEEEEEccc--ccccCCCEEeCCCccccccCceEEEeec
Confidence            4456789999999998  67889999999766543 4555556665

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	132
3f6u_H	240	Crystal Structure Of Human Activated Protein C (Apc		1e-08
1aut_C	250	Human Activated Protein C Length = 250		1e-08
4igd_A	406	Crystal Structure Of The Zymogen Catalytic Region O		3e-08
3gov_B	251	Crystal Structure Of The Catalytic Region Of Human		3e-08
2olg_A	278	Crystal Structure Of The Serine Protease Domain Of		9e-08
2olg_A	278	Crystal Structure Of The Serine Protease Domain Of		5e-07
2xxl_A	408	Crystal Structure Of Drosophila Grass Clip Serine P		5e-07
2xxl_A	408	Crystal Structure Of Drosophila Grass Clip Serine P		1e-04
2pux_B	258	Crystal Structure Of Murine Thrombin In Complex Wit		6e-07
2pux_B	258	Crystal Structure Of Murine Thrombin In Complex Wit		7e-05
2ocv_B	259	Structural Basis Of Na+ Activation Mimicry In Murin		6e-07
2ocv_B	259	Structural Basis Of Na+ Activation Mimicry In Murin		7e-05
3edx_B	258	Crystal Structure Of The W215aE217A MUTANT OF MURIN		6e-07
3edx_B	258	Crystal Structure Of The W215aE217A MUTANT OF MURIN		7e-05
3r3g_B	259	Structure Of Human Thrombin With Residues 145-150 O		7e-07
3r3g_B	259	Structure Of Human Thrombin With Residues 145-150 O		5e-05
1ym0_A	238	Crystal Structure Of Earthworm Fibrinolytic Enzyme		1e-06
3nxp_A	424	Crystal Structure Of Human Prethrombin-1 Length = 4		1e-06
3nxp_A	424	Crystal Structure Of Human Prethrombin-1 Length = 4		1e-04
1nu9_A	291	Staphylocoagulase-prethrombin-2 Complex Length = 29		2e-06
1nu9_A	291	Staphylocoagulase-prethrombin-2 Complex Length = 29		1e-04
1hag_E	295	The Isomorphous Structures Of Prethrombin2, Hirugen		2e-06
1hag_E	295	The Isomorphous Structures Of Prethrombin2, Hirugen		1e-04
3t2n_A	372	Human Hepsin Protease In Complex With The Fab Fragm		2e-06
3sqe_E	290	Crystal Structure Of Prethrombin-2 Mutant S195a In		2e-06
3sqe_E	290	Crystal Structure Of Prethrombin-2 Mutant S195a In		1e-04
1z8g_A	372	Crystal Structure Of The Extracellular Region Of Th		2e-06
2bdy_A	289	Thrombin In Complex With Inhibitor Length = 289		2e-06
2bdy_A	289	Thrombin In Complex With Inhibitor Length = 289		1e-04
1nm6_A	287	Thrombin In Complex With Selective Macrocyclic Inhi		2e-06
1nm6_A	287	Thrombin In Complex With Selective Macrocyclic Inhi		1e-04
1eoj_A	289	Design Of P1' And P3' Residues Of Trivalent Thrombi		2e-06
1eoj_A	289	Design Of P1' And P3' Residues Of Trivalent Thrombi		1e-04
1o5e_H	255	Dissecting And Designing Inhibitor Selectivity Dete		2e-06
1jwt_A	305	Crystal Structure Of Thrombin In Complex With A Nov		2e-06
1jwt_A	305	Crystal Structure Of Thrombin In Complex With A Nov		1e-04
1d9i_A	288	Structure Of Thrombin Complexed With Selective Non-		2e-06
1d9i_A	288	Structure Of Thrombin Complexed With Selective Non-		1e-04
3k65_B	308	Crystal Structure Of Prethombin-2FRAGMENT-2 Complex		2e-06
3k65_B	308	Crystal Structure Of Prethombin-2FRAGMENT-2 Complex		1e-04
1mh0_A	287	Crystal Structure Of The Anticoagulant Slow Form Of		2e-06
1mh0_A	287	Crystal Structure Of The Anticoagulant Slow Form Of		1e-04
1d6w_A	287	Structure Of Thrombin Complexed With Selective Non-		2e-06
1d6w_A	287	Structure Of Thrombin Complexed With Selective Non-		1e-04
1b7x_B	259	Structure Of Human Alpha-Thrombin Y225i Mutant Boun		2e-06
1b7x_B	259	Structure Of Human Alpha-Thrombin Y225i Mutant Boun		2e-04
1jou_B	259	Crystal Structure Of Native S195a Thrombin With An		2e-06
1jou_B	259	Crystal Structure Of Native S195a Thrombin With An		1e-04
1twx_B	259	Crystal Structure Of The Thrombin Mutant D221aD222K		2e-06
1twx_B	259	Crystal Structure Of The Thrombin Mutant D221aD222K		1e-04
1dx5_M	259	Crystal Structure Of The Thrombin-Thrombomodulin Co		2e-06
1dx5_M	259	Crystal Structure Of The Thrombin-Thrombomodulin Co		1e-04
1dm4_B	260	Ser195ala Mutant Of Human Thrombin Complexed With F		2e-06
1dm4_B	260	Ser195ala Mutant Of Human Thrombin Complexed With F		2e-04
2pgb_B	259	Inhibitor-Free Human Thrombin Mutant C191a-C220a Le		2e-06
2pgb_B	259	Inhibitor-Free Human Thrombin Mutant C191a-C220a Le		1e-04
1bth_H	259	Structure Of Thrombin Complexed With Bovine Pancrea		2e-06
1bth_H	259	Structure Of Thrombin Complexed With Bovine Pancrea		2e-04
1tq0_B	257	Crystal Structure Of The Potent Anticoagulant Throm		2e-06
1tq0_B	257	Crystal Structure Of The Potent Anticoagulant Throm		1e-04
3ee0_B	259	Crystal Structure Of The W215aE217A MUTANT OF HUMAN		2e-06
3ee0_B	259	Crystal Structure Of The W215aE217A MUTANT OF HUMAN		1e-04
1gj5_H	258	Selectivity At S1, H2o Displacement, Upa, Tpa, Ser1		2e-06
1gj5_H	258	Selectivity At S1, H2o Displacement, Upa, Tpa, Ser1		2e-04
1abi_H	259	Structure Of The Hirulog 3-Thrombin Complex And Nat		2e-06
1abi_H	259	Structure Of The Hirulog 3-Thrombin Complex And Nat		2e-04
1wbg_B	259	Active Site Thrombin Inhibitors Length = 259		2e-06
1wbg_B	259	Active Site Thrombin Inhibitors Length = 259		2e-04
1mbq_A	220	Anionic Trypsin From Pacific Chum Salmon Length = 2		2e-06
1mbq_A	220	Anionic Trypsin From Pacific Chum Salmon Length = 2		2e-04
2thf_B	259	Structure Of Human Alpha-thrombin Y225f Mutant Boun		2e-06
2thf_B	259	Structure Of Human Alpha-thrombin Y225f Mutant Boun		1e-04
1sfq_B	259	Fast Form Of Thrombin Mutant R(77a)a Bound To Ppack		2e-06
1sfq_B	259	Fast Form Of Thrombin Mutant R(77a)a Bound To Ppack		1e-04
1qur_H	257	Human Alpha-Thrombin In Complex With Bivalent, Benz		2e-06
1qur_H	257	Human Alpha-Thrombin In Complex With Bivalent, Benz		1e-04
2od3_B	259	Human Thrombin Chimera With Human Residues 184a, 18		2e-06
2od3_B	259	Human Thrombin Chimera With Human Residues 184a, 18		2e-04
1z8i_B	259	Crystal Structure Of The Thrombin Mutant G193a Boun		2e-06
1z8i_B	259	Crystal Structure Of The Thrombin Mutant G193a Boun		2e-04
1rd3_B	259	2.5a Structure Of Anticoagulant Thrombin Variant E2		2e-06
1rd3_B	259	2.5a Structure Of Anticoagulant Thrombin Variant E2		2e-04
1thp_B	259	Structure Of Human Alpha-Thrombin Y225p Mutant Boun		2e-06
1thp_B	259	Structure Of Human Alpha-Thrombin Y225p Mutant Boun		2e-04
2a0q_B	257	Structure Of Thrombin In 400 Mm Potassium Chloride		2e-06
2a0q_B	257	Structure Of Thrombin In 400 Mm Potassium Chloride		2e-04
1z8j_B	259	Crystal Structure Of The Thrombin Mutant G193p Boun		2e-06
1z8j_B	259	Crystal Structure Of The Thrombin Mutant G193p Boun		1e-04
1vr1_H	261	Specifity For Plasminogen Activator Inhibitor-1 Len		2e-06
1vr1_H	261	Specifity For Plasminogen Activator Inhibitor-1 Len		1e-04
2hnt_E	81	Crystallographic Structure Of Human Gamma-Thrombin		2e-06
2hnt_E	81	Crystallographic Structure Of Human Gamma-Thrombin		1e-04
2b9l_A	394	Crystal Structure Of Prophenoloxidase Activating Fa		2e-06
3tvj_B	242	Catalytic Fragment Of Masp-2 In Complex With Its Sp		2e-06
3tvj_B	242	Catalytic Fragment Of Masp-2 In Complex With Its Sp		2e-04
4fxg_H	242	Complement C4 In Complex With Masp-2 Length = 242		2e-06
4fxg_H	242	Complement C4 In Complex With Masp-2 Length = 242		2e-04
1q3x_A	328	Crystal Structure Of The Catalytic Region Of Human		2e-06
1q3x_A	328	Crystal Structure Of The Catalytic Region Of Human		2e-04
1bhx_B	147	X-Ray Structure Of The Complex Of Human Alpha Throm		3e-06
1bhx_B	147	X-Ray Structure Of The Complex Of Human Alpha Throm		1e-04
2zps_A	222	Crystal Structure Of Anionic Trypsin Isoform 3 From		3e-06
2zps_A	222	Crystal Structure Of Anionic Trypsin Isoform 3 From		4e-04
1h8i_H	253	X-Ray Crystal Structure Of Human Alpha-Thrombin Wit		3e-06
1h8i_H	253	X-Ray Crystal Structure Of Human Alpha-Thrombin Wit		1e-04
1vzq_H	250	Complex Of Thrombin With Designed Inhibitor 7165 Le		3e-06
1vzq_H	250	Complex Of Thrombin With Designed Inhibitor 7165 Le		2e-05
1utj_A	242	Trypsin Specificity As Elucidated By Lie Calculatio		3e-06
1utj_A	242	Trypsin Specificity As Elucidated By Lie Calculatio		5e-04
1bit_A	237	The Crystal Structure Of Anionic Salmon Trypsin In		3e-06
1bit_A	237	The Crystal Structure Of Anionic Salmon Trypsin In		5e-04
3gic_B	250	Structure Of Thrombin Mutant Delta(146-149e) In The		3e-06
3gic_B	250	Structure Of Thrombin Mutant Delta(146-149e) In The		2e-04
1bzx_E	222	The Crystal Structure Of Anionic Salmon Trypsin In		3e-06
1bzx_E	222	The Crystal Structure Of Anionic Salmon Trypsin In		5e-04
1hj8_A	222	1.00 Aa Trypsin From Atlantic Salmon Length = 222		3e-06
1hj8_A	222	1.00 Aa Trypsin From Atlantic Salmon Length = 222		5e-04
2zpq_A	222	Crystal Structure Of Anionic Trypsin Isoform 1 From		3e-06
2zpq_A	222	Crystal Structure Of Anionic Trypsin Isoform 1 From		4e-04
1h8d_H	260	X-Ray Structure Of The Human Alpha-Thrombin Complex		3e-06
1h8d_H	260	X-Ray Structure Of The Human Alpha-Thrombin Complex		3e-05
2zpr_A	222	Crystal Structure Of Anionic Trypsin Isoform 2 From		3e-06
2zpr_A	222	Crystal Structure Of Anionic Trypsin Isoform 2 From		4e-04
2bvr_H	252	Human Thrombin Complexed With Fragment-based Small		3e-06
2bvr_H	252	Human Thrombin Complexed With Fragment-based Small		3e-05
3jz1_B	259	Crystal Structure Of Human Thrombin Mutant N143p In		4e-06
3jz1_B	259	Crystal Structure Of Human Thrombin Mutant N143p In		2e-04
1mkw_K	308	The Co-Crystal Structure Of Unliganded Bovine Alpha		4e-06
1zjk_A	403	Crystal Structure Of The Zymogen Catalytic Region O		4e-06
1zjk_A	403	Crystal Structure Of The Zymogen Catalytic Region O		2e-04
1id5_H	256	Crystal Structure Of Bovine Thrombin Complex With P		4e-06
2tbs_A	222	Cold-Adaption Of Enzymes: Structural Comparison Bet		4e-06
2tbs_A	222	Cold-Adaption Of Enzymes: Structural Comparison Bet		5e-04
1bbr_K	259	The Structure Of Residues 7-16 Of The A Alpha Chain		4e-06
1eaw_A	241	Crystal Structure Of The Mtsp1 (Matriptase)-Bpti (A		5e-06
1eaw_A	241	Crystal Structure Of The Mtsp1 (Matriptase)-Bpti (A		7e-05
3p8g_A	241	Crystal Structure Of Mt-Sp1 In Complex With Benzami		6e-06
3p8g_A	241	Crystal Structure Of Mt-Sp1 In Complex With Benzami		7e-05
2gp9_B	259	Crystal Structure Of The Slow Form Of Thrombin In A		6e-06
2gp9_B	259	Crystal Structure Of The Slow Form Of Thrombin In A		5e-04
1iau_A	227	Human Granzyme B In Complex With Ac-Iepd-Cho Length		7e-06
1fq3_A	227	Crystal Structure Of Human Granzyme B Length = 227		7e-06
2wph_S	235	Factor Ixa Superactive Triple Mutant Length = 235		1e-05
2wpm_S	235	Factor Ixa Superactive Mutant, Egr-Cmk Inhibited Le		1e-05
2wpi_S	235	Factor Ixa Superactive Double Mutant Length = 235		2e-05
1bbr_H	150	The Structure Of Residues 7-16 Of The A Alpha Chain		2e-05
3plk_A	223	Bovine Trypsin Variant X(Tripleile227) In Complex W		4e-05
3pwb_A	223	Bovine Trypsin Variant X(Tripleglu217ile227) In Com		4e-05
3pmj_A	223	Bovine Trypsin Variant X(Tripleile227) In Complex W		4e-05
1v2k_T	223	Factor Xa Specific Inhibitor In Complex With Bovine		4e-05
4b2a_A	223	Structure Of The Factor Xa-Like Trypsin Variant Tri		4e-05
4b1t_A	223	Structure Of The Factor Xa-Like Trypsin Variant Tri		4e-05
1ekb_B	235	The Serine Protease Domain Of Enteropeptidase Bound		4e-05
1ekb_B	235	The Serine Protease Domain Of Enteropeptidase Bound		5e-04
3unq_A	223	Bovine Trypsin Variant X(Triplephe227) In Complex W		4e-05
1v2n_T	223	Potent Factor Xa Inhibitor In Complex With Bovine T		4e-05
4b2b_A	223	Structure Of The Factor Xa-Like Trypsin Variant Tri		4e-05
1y59_T	223	Dianhydrosugar-Based Benzamidine, Factor Xa Specifi		4e-05
4b2c_A	223	Structure Of The Factor Xa-Like Trypsin Variant Tri		4e-05
3uqv_A	223	Bovine Trypsin Variant X(Triplephe227) In Complex W		4e-05
3uns_A	223	Bovine Trypsin Variant X(Triplephe227) In Complex W		4e-05
3uwi_A	223	Bovine Trypsin Variant X(Tripleglu217phe227) In Com		4e-05
4gaw_A	226	Crystal Structure Of Active Human Granzyme H Length		4e-05
1dlk_B	230	Crystal Structure Analysis Of Delta-Chymotrypsin Bo		4e-05
1dlk_B	230	Crystal Structure Analysis Of Delta-Chymotrypsin Bo		4e-04
2eek_A	220	Crystal Structure Of Atlantic Cod Trypsin Complexed		5e-05
2cga_A	245	Bovine Chymotrypsinogen A. X-Ray Crystal Structure		5e-05
2cga_A	245	Bovine Chymotrypsinogen A. X-Ray Crystal Structure		5e-04
1mtn_B	131	Bovine Alpha-Chymotrypsin:bpti Crystallization Leng		5e-05
1mtn_B	131	Bovine Alpha-Chymotrypsin:bpti Crystallization Leng		4e-04
3veq_B	223	A Binary Complex Betwwen Bovine Pancreatic Trypsin		5e-05
3v0x_A	223	Bovine Trypsin Variant X(Tripleglu217phe227) In Com		5e-05
2d8w_A	223	Structure Of Hyper-Vil-Trypsin Length = 223		6e-05
1v2u_T	223	Benzamidine In Complex With Bovine Trypsin Varinat		6e-05
1v2o_T	223	Trypsin Inhibitor In Complex With Bovine Trypsin Va		6e-05
1v2q_T	223	Trypsin Inhibitor In Complex With Bovine Trypsin Va		6e-05
2zgc_A	240	Crystal Structure Of Active Human Granzyme M Length		6e-05
1v2j_T	223	Benzamidine In Complex With Bovine Trypsin Variant		6e-05
1taw_A	223	Bovine Trypsin Complexed To Appi Length = 223		6e-05
2tld_E	220	Crystal Structure Of An Engineered Subtilisin Inhib		6e-05
1v2s_T	223	Benzamidine In Complex With Bovine Trypsin Variant		7e-05
5ptp_A	223	Structure Of Hydrolase (Serine Proteinase) Length =		7e-05
1hj9_A	223	Atomic Resolution Structures Of Trypsin Provide Ins		7e-05
1tab_E	223	Structure Of The Trypsin-Binding Domain Of Bowman-B		7e-05
3otj_E	223	A Crystal Structure Of Trypsin Complexed With Bpti		7e-05
1rfn_A	235	Human Coagulation Factor Ixa In Complex With P-Amin		7e-05
3kcg_H	235	Crystal Structure Of The Antithrombin-Factor Ixa- P		7e-05
1oph_B	243	Non-Covalent Complex Between Alpha-1-Pi-Pittsburgh		8e-05
1f0t_A	243	Bovine Trypsin Complexed With Rpr131247 Length = 24		8e-05
1g3b_A	228	Bovine Beta-Trypsin Bound To Meta-Amidino Schiff Ba		8e-05
1tgs_Z	229	Three-Dimensional Structure Of The Complex Between		8e-05
1zzz_A	237	Trypsin Inhibitors With Rigid Tripeptidyl Aldehydes		8e-05
1dan_H	254	Complex Of Active Site Inhibited Human Blood Coagul		8e-05
1dan_H	254	Complex Of Active Site Inhibited Human Blood Coagul		7e-04
2fi4_E	223	Crystal Structure Of A Bpti Variant (Cys14->ser) In		9e-05
2qy0_B	242	Active Dimeric Structure Of The Catalytic Domain Of		9e-05
3bn9_B	241	Crystal Structure Of Mt-Sp1 In Complex With Fab Inh		9e-05
3ela_H	254	Crystal Structure Of Active Site Inhibited Coagulat		1e-04
3ela_H	254	Crystal Structure Of Active Site Inhibited Coagulat		8e-04
1md7_A	328	Monomeric Structure Of The Zymogen Of Complement Pr		1e-04
1md8_A	329	Monomeric Structure Of The Active Catalytic Domain		1e-04
3tju_A	226	Crystal Structure Of Human Granzyme H With An Inhib		1e-04
1kig_H	241	Bovine Factor Xa Length = 241		1e-04
4f4o_C	347	Structure Of The Haptoglobin-Haemoglobin Complex Le		1e-04
4f4o_C	347	Structure Of The Haptoglobin-Haemoglobin Complex Le		2e-04
1ntp_A	223	Use Of The Neutron Diffraction HD EXCHANGE TECHNIQU		2e-04
2zgj_A	240	Crystal Structure Of D86n-gzmm Complexed With Its O		2e-04
4an7_A	231	Kunitz Type Trypsin Inhibitor Complex With Porcine		2e-04
1tfx_A	223	Complex Of The Second Kunitz Domain Of Tissue Facto		2e-04
3myw_A	223	The Bowman-Birk Type Inhibitor From Mung Bean In Te		2e-04
2a31_A	223	Trypsin In Complex With Borate Length = 223		2e-04
1gpz_A	399	The Crystal Structure Of The Zymogen Catalytic Doma		2e-04
1a0j_A	223	Crystal Structure Of A Non-Psychrophilic Trypsin Fr		2e-04
1mct_A	223	The Refined 1.6 Angstroms Resolution Crystal Struct		3e-04
2f91_A	237	1.2a Resolution Structure Of A Crayfish Trypsin Com		3e-04
3dfj_A	263	Crystal Structure Of Human Prostasin Length = 263		3e-04
1h9h_E	231	Complex Of Eeti-Ii With Porcine Trypsin Length = 23		3e-04
1elv_A	333	Crystal Structure Of The Catalytic Domain Of Human		3e-04
1an1_E	223	Leech-Derived Tryptase InhibitorTRYPSIN COMPLEX Len		3e-04
2y5f_A	234	Factor Xa - Cation Inhibitor Complex Length = 234		3e-04
2bok_A	241	Factor Xa- Cation Length = 241		3e-04
3gyl_B	261	Structure Of Prostasin At 1.3 Angstroms Resolution		4e-04
3e0p_B	271	The X-Ray Structure Of Human Prostasin In Complex W		4e-04
3g01_A	227	Structure Of Grc Mutant E192rE193G Length = 227		4e-04
2bq6_B	249	Crystal Structure Of Factor Xa In Complex With 21 L		4e-04
3fzz_A	227	Structure Of Grc Length = 227		4e-04
1xka_C	235	Factor Xa Complexed With A Synthetic Inhibitor Fx-2		4e-04
2ra3_A	224	Human Cationic Trypsin Complexed With Bovine Pancre		5e-04
1hcg_A	241	Structure Of Human Des(1-45) Factor Xa At 2.2 Angst		5e-04
1ezq_A	254	Crystal Structure Of Human Coagulation Factor Xa Co		5e-04
3ens_B	238	Crystal Structure Of Human Fxa In Complex With Meth		5e-04
1fjs_A	234	Crystal Structure Of The Inhibitor Zk-807834 (Ci-10		5e-04
1c5m_D	255	Structural Basis For Selectivity Of A Small Molecul		5e-04
2gd4_H	241	Crystal Structure Of The Antithrombin-S195a Factor		5e-04
1mq5_A	233	Crystal Structure Of 3-chloro-n-[4-chloro-2-[[(4-ch		5e-04
1fax_A	254	Coagulation Factor Xa Inhibitor Complex Length = 25		5e-04
1aks_A	125	Crystal Structure Of The First Active Autolysate Fo		5e-04
1ept_B	82	Refined 1.8 Angstroms Resolution Crystal Structure		5e-04
2jet_B	128	Crystal Structure Of A Trypsin-Like Mutant (S189d,		5e-04
1fy3_A	225	[g175q]hbp, A Mutant Of Human Heparin Binding Prote		6e-04
1a7s_A	225	Atomic Resolution Structure Of Hbp Length = 225		6e-04
1fy1_A	225	[r23s,F25e]hbp, A Mutant Of Human Heparin Binding P		6e-04
1hyl_A	230	The 1.8 A Structure Of Collagenase From Hypoderma L		7e-04
1fiw_A	290	Three-Dimensional Structure Of Beta-Acrosin From Ra		7e-04
3qk1_A	229	Crystal Structure Of Enterokinase-Like Trypsin Vari		7e-04
1m9u_A	241	Crystal Structure Of Earthworm Fibrinolytic Enzyme		7e-04
1euf_A	227	Bovine Duodenase(New Serine Protease), Crystal Stru		8e-04
2qxg_A	224	Crystal Structure Of Human Kallikrein 7 In Complex		9e-04

>pdb|3F6U|H Chain H, Crystal Structure Of Human Activated Protein C (Apc) Complexed With Ppack Length = 240

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 2   FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD-----QTVKLVGKSA 56
             L+ ++ FVHP YS S   ND+AL+ + +     Q I+P+CLPD     + +   G+  
Sbjct: 67  LDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQET 126
Query: 57  TVAGWG 62
            V GWG
Sbjct: 127 LVTGWG 132

>pdb|1AUT|C Chain C, Human Activated Protein C Length = 250

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 2   FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD-----QTVKLVGKSA 56
             L+ ++ FVHP YS S   ND+AL+ + +     Q I+P+CLPD     + +   G+  
Sbjct: 67  LDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQET 126
Query: 57  TVAGWG 62
            V GWG
Sbjct: 127 LVTGWG 132

>pdb|4IGD|A Chain A, Crystal Structure Of The Zymogen Catalytic Region Of Human Masp-1 Length = 406

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           L  + + +HPQY P+ F NDVAL+++ +  V    ++P+CLP+   +  G    V+GWG+
Sbjct: 240 LGVKHTTLHPQYDPNTFENDVALVELLESPVLNAFVMPICLPEGP-QQEGAMVIVSGWGK 298

>pdb|3GOV|B Chain B, Crystal Structure Of The Catalytic Region Of Human Masp-1 Length = 251

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           L  + + +HPQY P+ F NDVAL+++ +  V    ++P+CLP+   +  G    V+GWG+
Sbjct: 85  LGVKHTTLHPQYDPNTFENDVALVELLESPVLNAFVMPICLPEGPQQ-EGAMVIVSGWGK 143

>pdb|2OLG|A Chain A, Crystal Structure Of The Serine Protease Domain Of Prophenoloxidase Activating Factor-I In A Zymogen Form Length = 278

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 4   LNTRQSFVHPQY--SPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAG 60
           L   ++  HP Y     D  +D+ALI++++ V F  +I PVCLP    ++ VG+  TV G
Sbjct: 112 LGIEETIQHPDYVDGSKDRYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVG 171
Query: 61  WGRTR 65
           WGRT 
Sbjct: 172 WGRTE 176

>pdb|2OLG|A Chain A, Crystal Structure Of The Serine Protease Domain Of Prophenoloxidase Activating Factor-I In A Zymogen Form Length = 278

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 12/87 (13%)
Query: 40  IPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVSISNDVALIKIDKDVVFKQHI 99
           + VC+PD+ + L G   T+      +H   +  +   Y    +D+ALI++++ V F  +I
Sbjct: 101 VRVCVPDKPIDL-GIEETI------QHPDYVDGSKDRY----HDIALIRLNRQVEFTNYI 149
Query: 100 IPVCLPDQTVKL-VGKSATVAGWGRTR 125
            PVCLP    ++ VG+  TV GWGRT 
Sbjct: 150 RPVCLPQPNEEVQVGQRLTVVGWGRTE 176

>pdb|2XXL|A Chain A, Crystal Structure Of Drosophila Grass Clip Serine Protease Of Toll Pathway Length = 408

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 8   QSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLP--DQTVKLVGKSAT--VAGWGR 63
           +  +H +Y      +D+AL+K+++ V F++HI P+CLP  D+  +   + +T  V GWG 
Sbjct: 208 KHLIHEKYDARHIMHDIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGT 267
Query: 64  TRHASS 69
           T + SS
Sbjct: 268 TENGSS 273

>pdb|2XXL|A Chain A, Crystal Structure Of Drosophila Grass Clip Serine Protease Of Toll Pathway Length = 408

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 80  ISNDVALIKIDKDVVFKQHIIPVCLP--DQTVKLVGKSAT--VAGWGRTRHAGHKE 131
           I +D+AL+K+++ V F++HI P+CLP  D+  +   + +T  V GWG T +    +
Sbjct: 220 IMHDIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTENGSSSD 275

>pdb|2PUX|B Chain B, Crystal Structure Of Murine Thrombin In Complex With The Extracellular Fragment Of Murine Par3 Length = 258

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPD-QTVKLV---GKSATVAGWGRT 64
           +VHP+Y+   +   D+AL+K+ K V F  +I PVCLPD QTV  +   G    V GWG  
Sbjct: 85  YVHPRYNWRENLDRDIALLKLKKPVPFSDYIHPVCLPDKQTVTSLLRAGYKGRVTGWGNL 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           R    ++++   P+ + + N
Sbjct: 145 RETWTTNINEIQPSVLQVVN 164

>pdb|2PUX|B Chain B, Crystal Structure Of Murine Thrombin In Complex With The Extracellular Fragment Of Murine Par3 Length = 258

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPD-QTVKLV---GKSATVAGWGRTRHA 127
           ++  D+AL+K+ K V F  +I PVCLPD QTV  +   G    V GWG  R  
Sbjct: 95  NLDRDIALLKLKKPVPFSDYIHPVCLPDKQTVTSLLRAGYKGRVTGWGNLRET 147

>pdb|2OCV|B Chain B, Structural Basis Of Na+ Activation Mimicry In Murine Thrombin Length = 259

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPD-QTVKLV---GKSATVAGWGRT 64
           +VHP+Y+   +   D+AL+K+ K V F  +I PVCLPD QTV  +   G    V GWG  
Sbjct: 85  YVHPRYNWRENLDRDIALLKLKKPVPFSDYIHPVCLPDKQTVTSLLRAGYKGRVTGWGNL 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           R    ++++   P+ + + N
Sbjct: 145 RETWTTNINEIQPSVLQVVN 164

>pdb|2OCV|B Chain B, Structural Basis Of Na+ Activation Mimicry In Murine Thrombin Length = 259

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPD-QTVKLV---GKSATVAGWGRTRHA 127
           ++  D+AL+K+ K V F  +I PVCLPD QTV  +   G    V GWG  R  
Sbjct: 95  NLDRDIALLKLKKPVPFSDYIHPVCLPDKQTVTSLLRAGYKGRVTGWGNLRET 147

>pdb|3EDX|B Chain B, Crystal Structure Of The W215aE217A MUTANT OF MURINE THROMBIN Length = 258

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPD-QTVKLV---GKSATVAGWGRT 64
           +VHP+Y+   +   D+AL+K+ K V F  +I PVCLPD QTV  +   G    V GWG  
Sbjct: 85  YVHPRYNWRENLDRDIALLKLKKPVPFSDYIHPVCLPDKQTVTSLLRAGYKGRVTGWGNL 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           R    ++++   P+ + + N
Sbjct: 145 RETWTTNINEIQPSVLQVVN 164

>pdb|3EDX|B Chain B, Crystal Structure Of The W215aE217A MUTANT OF MURINE THROMBIN Length = 258

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPD-QTVKLV---GKSATVAGWGRTRHA 127
           ++  D+AL+K+ K V F  +I PVCLPD QTV  +   G    V GWG  R  
Sbjct: 95  NLDRDIALLKLKKPVPFSDYIHPVCLPDKQTVTSLLRAGYKGRVTGWGNLRET 147

>pdb|1YM0|A Chain A, Crystal Structure Of Earthworm Fibrinolytic Enzyme Component B: A Novel, Glycosylated Two-chained Trypsin Length = 238

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 36/72 (50%)
Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS 69
           FV+  Y P+   NDV++IK    + F  ++ P+C PD     V + +  +GWG       
Sbjct: 78  FVNENYDPATLENDVSVIKTAVAITFDINVGPICAPDPANDYVYRKSQCSGWGTINSGGV 137
Query: 70  LSSAIPTYVSIS 81
              A+  YV+++
Sbjct: 138 CCPAVLRYVTLN 149

>pdb|3NXP|A Chain A, Crystal Structure Of Human Prethrombin-1 Length = 424

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 250 YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 309
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 310 KETWTANVGKGQPSVLQVVN 329

>pdb|3NXP|A Chain A, Crystal Structure Of Human Prethrombin-1 Length = 424

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTR 125
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  +
Sbjct: 260 NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLK 310

>pdb|1NU9|A Chain A, Staphylocoagulase-prethrombin-2 Complex Length = 291

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 117 YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 176
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 177 KETWTANVGKGQPSVLQVVN 196

>pdb|1NU9|A Chain A, Staphylocoagulase-prethrombin-2 Complex Length = 291

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 127 NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 178

>pdb|1HAG|E Chain E, The Isomorphous Structures Of Prethrombin2, Hirugen-And Ppack- Thrombin: Changes Accompanying Activation And Exosite Binding To Thrombin Length = 295

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 121 YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 180
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 181 KETWTANVGKGQPSVLQVVN 200

>pdb|1HAG|E Chain E, The Isomorphous Structures Of Prethrombin2, Hirugen-And Ppack- Thrombin: Changes Accompanying Activation And Exosite Binding To Thrombin Length = 295

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 131 NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 182

>pdb|3T2N|A Chain A, Human Hepsin Protease In Complex With The Fab Fragment Of An Inhibitory Antibody Length = 372

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 66  HASSLSSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV-GKSATVAGWGRT 124
           H   L    P     SND+AL+ +   +   ++I PVCLP     LV GK  TV GWG T
Sbjct: 195 HGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNT 254
Query: 125 RHAGHK 130
           ++ G +
Sbjct: 255 QYYGQQ 260

>pdb|3SQE|E Chain E, Crystal Structure Of Prethrombin-2 Mutant S195a In The Alternative Form Length = 290

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 116 YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 175
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 176 KETWTANVGKGQPSVLQVVN 195

>pdb|3SQE|E Chain E, Crystal Structure Of Prethrombin-2 Mutant S195a In The Alternative Form Length = 290

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 126 NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 177

>pdb|1Z8G|A Chain A, Crystal Structure Of The Extracellular Region Of The Transmembrane Serine Protease Hepsin With Covalently Bound Preferred Substrate Length = 372

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 66  HASSLSSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV-GKSATVAGWGRT 124
           H   L    P     SND+AL+ +   +   ++I PVCLP     LV GK  TV GWG T
Sbjct: 195 HGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNT 254
Query: 125 RHAGHK 130
           ++ G +
Sbjct: 255 QYYGQQ 260

>pdb|2BDY|A Chain A, Thrombin In Complex With Inhibitor Length = 289

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 115 YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 174
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 175 KETWTANVGKGQPSVLQVVN 194

>pdb|2BDY|A Chain A, Thrombin In Complex With Inhibitor Length = 289

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 125 NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 176

>pdb|1NM6|A Chain A, Thrombin In Complex With Selective Macrocyclic Inhibitor At 1.8a Length = 287

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 114 YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 173
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 174 KETWTANVGKGQPSVLQVVN 193

>pdb|1NM6|A Chain A, Thrombin In Complex With Selective Macrocyclic Inhibitor At 1.8a Length = 287

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 124 NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 175

>pdb|1EOJ|A Chain A, Design Of P1' And P3' Residues Of Trivalent Thrombin Inhibitors And Their Crystal Structures Length = 289

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 117 YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 176
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 177 KETWTANVGKGQPSVLQVVN 196

>pdb|1EOJ|A Chain A, Design Of P1' And P3' Residues Of Trivalent Thrombin Inhibitors And Their Crystal Structures Length = 289

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 127 NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 178

>pdb|1O5E|H Chain H, Dissecting And Designing Inhibitor Selectivity Determinants At The S1 Site Using An Artificial Ala190 Protease (ala190 Upa) Length = 255

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 66  HASSLSSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV-GKSATVAGWGRT 124
           H   L    P     SND+AL+ +   +   ++I PVCLP     LV GK  TV GWG T
Sbjct: 78  HGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNT 137
Query: 125 RHAGHK 130
           ++ G +
Sbjct: 138 QYYGQQ 143

>pdb|1JWT|A Chain A, Crystal Structure Of Thrombin In Complex With A Novel Bicyclic Lactam Inhibitor Length = 305

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 121 YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 180
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 181 KETWTANVGKGQPSVLQVVN 200

>pdb|1JWT|A Chain A, Crystal Structure Of Thrombin In Complex With A Novel Bicyclic Lactam Inhibitor Length = 305

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 131 NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 182

>pdb|1D9I|A Chain A, Structure Of Thrombin Complexed With Selective Non-Electophilic Inhibitors Having Cyclohexyl Moieties At P1 Length = 288

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 115 YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 174
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 175 KETWTANVGKGQPSVLQVVN 194

>pdb|1D9I|A Chain A, Structure Of Thrombin Complexed With Selective Non-Electophilic Inhibitors Having Cyclohexyl Moieties At P1 Length = 288

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 125 NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 176

>pdb|3K65|B Chain B, Crystal Structure Of Prethombin-2FRAGMENT-2 Complex Length = 308

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 134 YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 193
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 194 KETWTANVGKGQPSVLQVVN 213

>pdb|3K65|B Chain B, Crystal Structure Of Prethombin-2FRAGMENT-2 Complex Length = 308

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 144 NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 195

>pdb|1MH0|A Chain A, Crystal Structure Of The Anticoagulant Slow Form Of Thrombin Length = 287

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 115 YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 174
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 175 KETWTANVGKGQPSVLQVVN 194

>pdb|1MH0|A Chain A, Crystal Structure Of The Anticoagulant Slow Form Of Thrombin Length = 287

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 125 NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 176

>pdb|1D6W|A Chain A, Structure Of Thrombin Complexed With Selective Non-Electrophilic Inhibitors Having Cyclohexyl Moieties At P1 Length = 287

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 115 YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 174
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 175 KETWTANVGKGQPSVLQVVN 194

>pdb|1D6W|A Chain A, Structure Of Thrombin Complexed With Selective Non-Electrophilic Inhibitors Having Cyclohexyl Moieties At P1 Length = 287

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 125 NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 176

>pdb|1B7X|B Chain B, Structure Of Human Alpha-Thrombin Y225i Mutant Bound To D- Phe-Pro-Arg-Chloromethylketone Length = 259

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 145 KETWTANVGKGQPSVLQVVN 164

>pdb|1B7X|B Chain B, Structure Of Human Alpha-Thrombin Y225i Mutant Bound To D- Phe-Pro-Arg-Chloromethylketone Length = 259

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1JOU|B Chain B, Crystal Structure Of Native S195a Thrombin With An Unoccupied Active Site Length = 259

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 145 KETWTANVGKGQPSVLQVVN 164

>pdb|1JOU|B Chain B, Crystal Structure Of Native S195a Thrombin With An Unoccupied Active Site Length = 259

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1TWX|B Chain B, Crystal Structure Of The Thrombin Mutant D221aD222K Length = 259

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 145 KETWTANVGKGQPSVLQVVN 164

>pdb|1TWX|B Chain B, Crystal Structure Of The Thrombin Mutant D221aD222K Length = 259

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1DX5|M Chain M, Crystal Structure Of The Thrombin-Thrombomodulin Complex Length = 259

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 145 KETWTANVGKGQPSVLQVVN 164

>pdb|1DX5|M Chain M, Crystal Structure Of The Thrombin-Thrombomodulin Complex Length = 259

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1DM4|B Chain B, Ser195ala Mutant Of Human Thrombin Complexed With Fibrinopeptide A (7- 16) Length = 260

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 86  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 145
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 146 KETWTANVGKGQPSVLQVVN 165

>pdb|1DM4|B Chain B, Ser195ala Mutant Of Human Thrombin Complexed With Fibrinopeptide A (7- 16) Length = 260

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 96  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 147

>pdb|2PGB|B Chain B, Inhibitor-Free Human Thrombin Mutant C191a-C220a Length = 259

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 145 KETWTANVGKGQPSVLQVVN 164

>pdb|2PGB|B Chain B, Inhibitor-Free Human Thrombin Mutant C191a-C220a Length = 259

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1BTH|H Chain H, Structure Of Thrombin Complexed With Bovine Pancreatic Trypsin Inhibitor Length = 259

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 145 KETWTTNVGKGQPSVLQVVN 164

>pdb|1BTH|H Chain H, Structure Of Thrombin Complexed With Bovine Pancreatic Trypsin Inhibitor Length = 259

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1TQ0|B Chain B, Crystal Structure Of The Potent Anticoagulant Thrombin Mutant W215aE217A IN FREE FORM Length = 257

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 145 KETWTANVGKGQPSVLQVVN 164

>pdb|1TQ0|B Chain B, Crystal Structure Of The Potent Anticoagulant Thrombin Mutant W215aE217A IN FREE FORM Length = 257

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|3EE0|B Chain B, Crystal Structure Of The W215aE217A MUTANT OF HUMAN Thrombin (Space Group P2(1)2(1)2(1)) Length = 259

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 145 KETWTANVGKGQPSVLQVVN 164

>pdb|3EE0|B Chain B, Crystal Structure Of The W215aE217A MUTANT OF HUMAN Thrombin (Space Group P2(1)2(1)2(1)) Length = 259

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1GJ5|H Chain H, Selectivity At S1, H2o Displacement, Upa, Tpa, Ser190ALA190 PROTEASE, Structure-Based Drug Design Length = 258

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 145 KETWTANVGKGQPSVLQVVN 164

>pdb|1GJ5|H Chain H, Selectivity At S1, H2o Displacement, Upa, Tpa, Ser190ALA190 PROTEASE, Structure-Based Drug Design Length = 258

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1ABI|H Chain H, Structure Of The Hirulog 3-Thrombin Complex And Nature Of The S' Subsites Of Substrates And Inhibitors Length = 259

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 145 KETWTANVGKGQPSVLQVVN 164

>pdb|1ABI|H Chain H, Structure Of The Hirulog 3-Thrombin Complex And Nature Of The S' Subsites Of Substrates And Inhibitors Length = 259

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1WBG|B Chain B, Active Site Thrombin Inhibitors Length = 259

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 145 KETWTANVGKGQPSVLQVVN 164

>pdb|1WBG|B Chain B, Active Site Thrombin Inhibitors Length = 259

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1MBQ|A Chain A, Anionic Trypsin From Pacific Chum Salmon Length = 220

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS 69
           HP YS  +  ND+ LIK+ K      ++ PV LP       G   TV+GWG T  +++
Sbjct: 73  HPNYSSYNIDNDIMLIKLSKSATLNTYVQPVALPSSCAP-AGTMCTVSGWGNTMSSTA 129

>pdb|1MBQ|A Chain A, Anionic Trypsin From Pacific Chum Salmon Length = 220

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 75  PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRT 124
           P Y S  I ND+ LIK+ K      ++ PV LP       G   TV+GWG T
Sbjct: 74  PNYSSYNIDNDIMLIKLSKSATLNTYVQPVALPSSCAP-AGTMCTVSGWGNT 124

>pdb|2THF|B Chain B, Structure Of Human Alpha-thrombin Y225f Mutant Bound To D-phe-pro-arg- Chloromethylketone Length = 259

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 145 KETWTANVGKGQPSVLQVVN 164

>pdb|2THF|B Chain B, Structure Of Human Alpha-thrombin Y225f Mutant Bound To D-phe-pro-arg- Chloromethylketone Length = 259

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1SFQ|B Chain B, Fast Form Of Thrombin Mutant R(77a)a Bound To Ppack Length = 259

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 145 KETWTANVGKGQPSVLQVVN 164

>pdb|1SFQ|B Chain B, Fast Form Of Thrombin Mutant R(77a)a Bound To Ppack Length = 259

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1QUR|H Chain H, Human Alpha-Thrombin In Complex With Bivalent, Benzamidine-Based Synthetic Inhibitor Length = 257

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 145 KETWTANVGKGQPSVLQVVN 164

>pdb|1QUR|H Chain H, Human Alpha-Thrombin In Complex With Bivalent, Benzamidine-Based Synthetic Inhibitor Length = 257

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|2OD3|B Chain B, Human Thrombin Chimera With Human Residues 184a, 186, 186a, 186b, 186c And 222 Replaced By Murine Thrombin Equivalents Length = 259

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 145 KETWTANVGKGQPSVLQVVN 164

>pdb|2OD3|B Chain B, Human Thrombin Chimera With Human Residues 184a, 186, 186a, 186b, 186c And 222 Replaced By Murine Thrombin Equivalents Length = 259

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1Z8I|B Chain B, Crystal Structure Of The Thrombin Mutant G193a Bound To Ppack Length = 259

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 145 KETWTANVGKGQPSVLQVVN 164

>pdb|1Z8I|B Chain B, Crystal Structure Of The Thrombin Mutant G193a Bound To Ppack Length = 259

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1RD3|B Chain B, 2.5a Structure Of Anticoagulant Thrombin Variant E217k Length = 259

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 145 KETWTANVGKGQPSVLQVVN 164

>pdb|1RD3|B Chain B, 2.5a Structure Of Anticoagulant Thrombin Variant E217k Length = 259

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1THP|B Chain B, Structure Of Human Alpha-Thrombin Y225p Mutant Bound To D-Phe-Pro-Arg- Chloromethylketone Length = 259

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 145 KETWTANVGKGQPSVLQVVN 164

>pdb|1THP|B Chain B, Structure Of Human Alpha-Thrombin Y225p Mutant Bound To D-Phe-Pro-Arg- Chloromethylketone Length = 259

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|2A0Q|B Chain B, Structure Of Thrombin In 400 Mm Potassium Chloride Length = 257

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 145 KETWTANVGKGQPSVLQVVN 164

>pdb|2A0Q|B Chain B, Structure Of Thrombin In 400 Mm Potassium Chloride Length = 257

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1Z8J|B Chain B, Crystal Structure Of The Thrombin Mutant G193p Bound To Ppack Length = 259

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 145 KETWTANVGKGQPSVLQVVN 164

>pdb|1Z8J|B Chain B, Crystal Structure Of The Thrombin Mutant G193p Bound To Ppack Length = 259

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1VR1|H Chain H, Specifity For Plasminogen Activator Inhibitor-1 Length = 261

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 89  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 148
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 149 KETWTANVGKGQPSVLQVVN 168

>pdb|1VR1|H Chain H, Specifity For Plasminogen Activator Inhibitor-1 Length = 261

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 99  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 150

>pdb|2HNT|E Chain E, Crystallographic Structure Of Human Gamma-Thrombin Length = 81

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 10 FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
          ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 12 YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 71
Query: 65 RH 66
          + 
Sbjct: 72 KE 73

>pdb|2HNT|E Chain E, Crystallographic Structure Of Human Gamma-Thrombin Length = 81

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 22  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 73

>pdb|2B9L|A Chain A, Crystal Structure Of Prophenoloxidase Activating Factor-Ii From The Beetle Holotrichia Diomphalia Length = 394

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 7   RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH 66
           RQ  +H  ++P    NDVAL+ +D+ +V   +I  +CLP Q+          +GWG+   
Sbjct: 215 RQVIIHSNFNPKTVVNDVALLLLDRPLVQADNIGTICLPQQSQIFDSTECFASGWGKKEF 274
Query: 67  ASSLSSAIPTYVSISNDVALIKIDKD 92
            S        Y +I   + L  +D+D
Sbjct: 275 GSRHR-----YSNILKKIQLPTVDRD 295

>pdb|3TVJ|B Chain B, Catalytic Fragment Of Masp-2 In Complex With Its Specific Inhibitor Developed By Directed Evolution On Sgci Scaffold Length = 242

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKS---ATVAGWGRTR 65
           F+H  Y+  + F ND+ALIK++  VV   +I P+CLP +  +   ++    T +GWG T+
Sbjct: 74  FIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQ 133
Query: 66  HA 67
Sbjct: 134 RG 135

>pdb|3TVJ|B Chain B, Catalytic Fragment Of Masp-2 In Complex With Its Specific Inhibitor Developed By Directed Evolution On Sgci Scaffold Length = 242

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 78  VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKS---ATVAGWGRTRHA 127
               ND+ALIK++  VV   +I P+CLP +  +   ++    T +GWG T+  
Sbjct: 83  AGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRG 135

>pdb|4FXG|H Chain H, Complement C4 In Complex With Masp-2 Length = 242

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKS---ATVAGWGRTR 65
           F+H  Y+  + F ND+ALIK++  VV   +I P+CLP +  +   ++    T +GWG T+
Sbjct: 74  FIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQ 133
Query: 66  HA 67
Sbjct: 134 RG 135

>pdb|4FXG|H Chain H, Complement C4 In Complex With Masp-2 Length = 242

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 78  VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKS---ATVAGWGRTRHA 127
               ND+ALIK++  VV   +I P+CLP +  +   ++    T +GWG T+  
Sbjct: 83  AGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRG 135

>pdb|1Q3X|A Chain A, Crystal Structure Of The Catalytic Region Of Human Masp-2 Length = 328

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKS---ATVAGWGRTR 65
           F+H  Y+  + F ND+ALIK++  VV   +I P+CLP +  +   ++    T +GWG T+
Sbjct: 160 FIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQ 219
Query: 66  HA 67
Sbjct: 220 RG 221

>pdb|1Q3X|A Chain A, Crystal Structure Of The Catalytic Region Of Human Masp-2 Length = 328

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 78  VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKS---ATVAGWGRTRHA 127
               ND+ALIK++  VV   +I P+CLP +  +   ++    T +GWG T+  
Sbjct: 169 AGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRG 221

>pdb|1BHX|B Chain B, X-Ray Structure Of The Complex Of Human Alpha Thrombin With The Inhibitor Sdz 229-357 Length = 147

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RH 66
           + 
Sbjct: 145 KE 146

>pdb|1BHX|B Chain B, X-Ray Structure Of The Complex Of Human Alpha Thrombin With The Inhibitor Sdz 229-357 Length = 147

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|2ZPS|A Chain A, Crystal Structure Of Anionic Trypsin Isoform 3 From Chum Salmon Length = 222

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS 69
           HP YS  +  ND+ LIK+ K      ++ PV LP       G   TV+GWG T  +++
Sbjct: 73  HPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPSSCAP-AGTMCTVSGWGNTMSSTA 129

>pdb|2ZPS|A Chain A, Crystal Structure Of Anionic Trypsin Isoform 3 From Chum Salmon Length = 222

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 75  PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRT 124
           P Y S  I ND+ LIK+ K      ++ PV LP       G   TV+GWG T
Sbjct: 74  PNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPSSCAP-AGTMCTVSGWGNT 124

>pdb|1H8I|H Chain H, X-Ray Crystal Structure Of Human Alpha-Thrombin With A Tripeptide Phosphonate Inhibitor Length = 253

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RHASSLSSAI 74
           +      S +
Sbjct: 145 KETWGQPSVL 154

>pdb|1H8I|H Chain H, X-Ray Crystal Structure Of Human Alpha-Thrombin With A Tripeptide Phosphonate Inhibitor Length = 253

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1VZQ|H Chain H, Complex Of Thrombin With Designed Inhibitor 7165 Length = 250

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RHASSLS 71
           +     S
Sbjct: 145 KETGQPS 151

>pdb|1VZQ|H Chain H, Complex Of Thrombin With Designed Inhibitor 7165 Length = 250

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRHAGH 129
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  +  G 
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETGQ 149

>pdb|1UTJ|A Chain A, Trypsin Specificity As Elucidated By Lie Calculations, X-Ray Structures And Association Constant Measurements Length = 242

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLS 71
           HP YS  +  ND+ LIK+ K      ++ PV LP       G   TV+GWG T  +++ S
Sbjct: 93  HPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSCAP-AGTMCTVSGWGNTMSSTADS 151
Query: 72  SAI 74
           + +
Sbjct: 152 NKL 154

>pdb|1UTJ|A Chain A, Trypsin Specificity As Elucidated By Lie Calculations, X-Ray Structures And Association Constant Measurements Length = 242

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 75  PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRT 124
           P Y S  I ND+ LIK+ K      ++ PV LP       G   TV+GWG T
Sbjct: 94  PNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSCAP-AGTMCTVSGWGNT 144

>pdb|1BIT|A Chain A, The Crystal Structure Of Anionic Salmon Trypsin In A Second Crystal Form Length = 237

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLS 71
           HP YS  +  ND+ LIK+ K      ++ PV LP       G   TV+GWG T  +++ S
Sbjct: 88  HPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSCAP-AGTMCTVSGWGNTMSSTADS 146
Query: 72  SAI 74
           + +
Sbjct: 147 NKL 149

>pdb|1BIT|A Chain A, The Crystal Structure Of Anionic Salmon Trypsin In A Second Crystal Form Length = 237

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 75  PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRT 124
           P Y S  I ND+ LIK+ K      ++ PV LP       G   TV+GWG T
Sbjct: 89  PNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSCAP-AGTMCTVSGWGNT 139

>pdb|3GIC|B Chain B, Structure Of Thrombin Mutant Delta(146-149e) In The Free Form Length = 250

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RHASSL 70
           +   S+
Sbjct: 145 KGQPSV 150

>pdb|3GIC|B Chain B, Structure Of Thrombin Mutant Delta(146-149e) In The Free Form Length = 250

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTR 125
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  +
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLK 145

>pdb|1BZX|E Chain E, The Crystal Structure Of Anionic Salmon Trypsin In Complex With Bovine Pancreatic Trypsin Inhibitor Length = 222

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLS 71
           HP YS  +  ND+ LIK+ K      ++ PV LP       G   TV+GWG T  +++ S
Sbjct: 73  HPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSCAP-AGTMCTVSGWGNTMSSTADS 131
Query: 72  SAI 74
           + +
Sbjct: 132 NKL 134

>pdb|1BZX|E Chain E, The Crystal Structure Of Anionic Salmon Trypsin In Complex With Bovine Pancreatic Trypsin Inhibitor Length = 222

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 75  PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRT 124
           P Y S  I ND+ LIK+ K      ++ PV LP       G   TV+GWG T
Sbjct: 74  PNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSCAP-AGTMCTVSGWGNT 124

>pdb|1HJ8|A Chain A, 1.00 Aa Trypsin From Atlantic Salmon Length = 222

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLS 71
           HP YS  +  ND+ LIK+ K      ++ PV LP       G   TV+GWG T  +++ S
Sbjct: 73  HPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSCAP-AGTMCTVSGWGNTMSSTADS 131
Query: 72  SAI 74
           + +
Sbjct: 132 NKL 134

>pdb|1HJ8|A Chain A, 1.00 Aa Trypsin From Atlantic Salmon Length = 222

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 75  PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRT 124
           P Y S  I ND+ LIK+ K      ++ PV LP       G   TV+GWG T
Sbjct: 74  PNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSCAP-AGTMCTVSGWGNT 124

>pdb|2ZPQ|A Chain A, Crystal Structure Of Anionic Trypsin Isoform 1 From Chum Salmon Length = 222

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS 69
           HP YS  +  ND+ LIK+ K      ++ PV LP       G   TV+GWG T  +++
Sbjct: 73  HPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPSSCAP-AGTMCTVSGWGNTMSSTA 129

>pdb|2ZPQ|A Chain A, Crystal Structure Of Anionic Trypsin Isoform 1 From Chum Salmon Length = 222

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 75  PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRT 124
           P Y S  I ND+ LIK+ K      ++ PV LP       G   TV+GWG T
Sbjct: 74  PNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPSSCAP-AGTMCTVSGWGNT 124

>pdb|1H8D|H Chain H, X-Ray Structure Of The Human Alpha-Thrombin Complex With A Tripeptide Phosphonate Inhibitor Length = 260

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RHASSLS 71
           +     S
Sbjct: 145 KETGQPS 151

>pdb|1H8D|H Chain H, X-Ray Structure Of The Human Alpha-Thrombin Complex With A Tripeptide Phosphonate Inhibitor Length = 260

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRHAGH 129
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  +  G 
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETGQ 149

>pdb|2ZPR|A Chain A, Crystal Structure Of Anionic Trypsin Isoform 2 From Chum Salmon Length = 222

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS 69
           HP YS  +  ND+ LIK+ K      ++ PV LP       G   TV+GWG T  +++
Sbjct: 73  HPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPSSCAP-AGTMCTVSGWGNTMSSTA 129

>pdb|2ZPR|A Chain A, Crystal Structure Of Anionic Trypsin Isoform 2 From Chum Salmon Length = 222

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 75  PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRT 124
           P Y S  I ND+ LIK+ K      ++ PV LP       G   TV+GWG T
Sbjct: 74  PNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPSSCAP-AGTMCTVSGWGNT 124

>pdb|2BVR|H Chain H, Human Thrombin Complexed With Fragment-based Small Molecules Occupying The S1 Pocket Length = 252

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RHASSLS 71
           +     S
Sbjct: 145 KEKGQPS 151

>pdb|2BVR|H Chain H, Human Thrombin Complexed With Fragment-based Small Molecules Occupying The S1 Pocket Length = 252

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRHAGH 129
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  +  G 
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKEKGQ 149

>pdb|3JZ1|B Chain B, Crystal Structure Of Human Thrombin Mutant N143p In E:na+ Form Length = 259

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGPL 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 145 KETWTANVGKGQPSVLQVVN 164

>pdb|3JZ1|B Chain B, Crystal Structure Of Human Thrombin Mutant N143p In E:na+ Form Length = 259

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWG 122
           ++  D+AL+K+ K V F  +I PVCLPD+    ++   G    V GWG
Sbjct: 95  NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWG 142

>pdb|1MKW|K Chain K, The Co-Crystal Structure Of Unliganded Bovine Alpha- Thrombin And Prethrombin-2: Movement Of The Yppw Segment And Active Site Residues Upon Ligand Binding Length = 308

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ--TVKLV--GKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ + +    +I PVCLPD+    KL+  G    V GWG  
Sbjct: 134 YIHPRYNWKENLDRDIALLKLKRPIELSDYIHPVCLPDKQTAAKLLHAGFKGRVTGWGNR 193
Query: 65  RH--ASSLSSAIPTYVSISN 82
           R    +S++   P+ + + N
Sbjct: 194 RETWTTSVAEVQPSVLQVVN 213

>pdb|1ZJK|A Chain A, Crystal Structure Of The Zymogen Catalytic Region Of Human Masp-2 Length = 403

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKS---ATVAGWGRTR 65
           F+H  Y+  + F ND+ALIK++  VV   +I P+CLP +  +   ++    T +GWG T+
Sbjct: 235 FIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQ 294

>pdb|1ZJK|A Chain A, Crystal Structure Of The Zymogen Catalytic Region Of Human Masp-2 Length = 403

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 82  NDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKS---ATVAGWGRTR 125
           ND+ALIK++  VV   +I P+CLP +  +   ++    T +GWG T+
Sbjct: 248 NDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQ 294

>pdb|1ID5|H Chain H, Crystal Structure Of Bovine Thrombin Complex With Protease Inhibitor Ecotin Length = 256

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ--TVKLV--GKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ + +    +I PVCLPD+    KL+  G    V GWG  
Sbjct: 85  YIHPRYNWKENLDRDIALLKLKRPIELSDYIHPVCLPDKQTAAKLLHAGFKGRVTGWGNR 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           R    +S++   P+ + + N
Sbjct: 145 RETWTTSVAEVQPSVLQVVN 164

>pdb|2TBS|A Chain A, Cold-Adaption Of Enzymes: Structural Comparison Between Salmon And Bovine Trypsins Length = 222

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS 69
           HP YS  +  ND+ LIK+ K      ++ PV LP       G   TV+GWG T  +++
Sbjct: 73  HPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSCAP-AGTMCTVSGWGNTMSSTA 129

>pdb|2TBS|A Chain A, Cold-Adaption Of Enzymes: Structural Comparison Between Salmon And Bovine Trypsins Length = 222

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 75  PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRT 124
           P Y S  I ND+ LIK+ K      ++ PV LP       G   TV+GWG T
Sbjct: 74  PNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSCAP-AGTMCTVSGWGNT 124

>pdb|1BBR|K Chain K, The Structure Of Residues 7-16 Of The A Alpha Chain Of Human Fibrinogen Bound To Bovine Thrombin At 2.3 Angstroms Resolution Length = 259

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ--TVKLV--GKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ + +    +I PVCLPD+    KL+  G    V GWG  
Sbjct: 85  YIHPRYNWKENLDRDIALLKLKRPIELSDYIHPVCLPDKQTAAKLLHAGFKGRVTGWGNR 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           R    +S++   P+ + + N
Sbjct: 145 RETWTTSVAEVQPSVLQVVN 164

>pdb|1EAW|A Chain A, Crystal Structure Of The Mtsp1 (Matriptase)-Bpti (Aprotinin) Complex Length = 241

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQT-VKLVGKSATVAGWGRTRHASS 69
           HP ++   F  D+AL++++K   +   + P+CLPD + V   GK+  V GWG T++  +
Sbjct: 86  HPFFNDFTFDYDIALLELEKPAEYSSMVRPICLPDASHVFPAGKAIWVTGWGHTQYGGT 144

>pdb|1EAW|A Chain A, Crystal Structure Of The Mtsp1 (Matriptase)-Bpti (Aprotinin) Complex Length = 241

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 83  DVALIKIDKDVVFKQHIIPVCLPDQT-VKLVGKSATVAGWGRTRHAG 128
           D+AL++++K   +   + P+CLPD + V   GK+  V GWG T++ G
Sbjct: 97  DIALLELEKPAEYSSMVRPICLPDASHVFPAGKAIWVTGWGHTQYGG 143

>pdb|3P8G|A Chain A, Crystal Structure Of Mt-Sp1 In Complex With Benzamidine Length = 241

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQT-VKLVGKSATVAGWGRTRHASS 69
           HP ++   F  D+AL++++K   +   + P+CLPD + V   GK+  V GWG T++  +
Sbjct: 86  HPFFNDFTFDYDIALLELEKPAEYSSMVRPICLPDASHVFPAGKAIWVTGWGHTQYGGT 144

>pdb|3P8G|A Chain A, Crystal Structure Of Mt-Sp1 In Complex With Benzamidine Length = 241

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 83  DVALIKIDKDVVFKQHIIPVCLPDQT-VKLVGKSATVAGWGRTRHAG 128
           D+AL++++K   +   + P+CLPD + V   GK+  V GWG T++ G
Sbjct: 97  DIALLELEKPAEYSSMVRPICLPDASHVFPAGKAIWVTGWGHTQYGG 143

>pdb|2GP9|B Chain B, Crystal Structure Of The Slow Form Of Thrombin In A Self- Inhibited Conformation Length = 259

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRT 64
           ++HP+Y+   +   ++AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  
Sbjct: 85  YIHPRYNWRENLDRNIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNL 144
Query: 65  RH--ASSLSSAIPTYVSISN 82
           +    +++    P+ + + N
Sbjct: 145 KETWTANVGKGQPSVLQVVN 164

>pdb|2GP9|B Chain B, Crystal Structure Of The Slow Form Of Thrombin In A Self- Inhibited Conformation Length = 259

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQ----TVKLVGKSATVAGWGRTRH 126
           ++  ++AL+K+ K V F  +I PVCLPD+    ++   G    V GWG  + 
Sbjct: 95  NLDRNIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKE 146

>pdb|1IAU|A Chain A, Human Granzyme B In Complex With Ac-Iepd-Cho Length = 227

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRT 64
           HP Y+P +F ND+ L+++++     + + P+ LP    ++  G++ +VAGWG+T
Sbjct: 77  HPAYNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQT 130

>pdb|1FQ3|A Chain A, Crystal Structure Of Human Granzyme B Length = 227

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRT 64
           HP Y+P +F ND+ L+++++     + + P+ LP    ++  G++ +VAGWG+T
Sbjct: 77  HPAYNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQT 130

>pdb|2WPH|S Chain S, Factor Ixa Superactive Triple Mutant Length = 235

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Query: 69  SLSSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQ---TVKLVGKSATVAGWGRTR 125
           + ++AI TY   ++D+AL+++D+ +V   ++ P+C+ D+    + L   S  V+GWGR  
Sbjct: 78  NFNAAINTY---NHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVF 134
Query: 126 HAG 128
           H G
Sbjct: 135 HKG 137

>pdb|2WPM|S Chain S, Factor Ixa Superactive Mutant, Egr-Cmk Inhibited Length = 235

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Query: 69  SLSSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQ---TVKLVGKSATVAGWGRTR 125
           + ++AI TY   ++D+AL+++D+ +V   ++ P+C+ D+    + L   S  V+GWGR  
Sbjct: 78  NFNAAINTY---NHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVF 134
Query: 126 HAG 128
           H G
Sbjct: 135 HKG 137

>pdb|2WPI|S Chain S, Factor Ixa Superactive Double Mutant Length = 235

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Query: 69  SLSSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQ---TVKLVGKSATVAGWGRTR 125
           + ++AI TY   ++D+AL+++D+ +V   ++ P+C+ D+    + L   S  V+GWGR  
Sbjct: 78  NYNAAINTY---NHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVF 134
Query: 126 HAG 128
           H G
Sbjct: 135 HKG 137

>pdb|1BBR|H Chain H, The Structure Of Residues 7-16 Of The A Alpha Chain Of Human Fibrinogen Bound To Bovine Thrombin At 2.3 Angstroms Resolution Length = 150

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ--TVKLV--GKSATVAGWGRT 64
           ++HP+Y+   +   D+AL+K+ + +    +I PVCLPD+    KL+  G    V GWG  
Sbjct: 85  YIHPRYNWKENLDRDIALLKLKRPIELSDYIHPVCLPDKQTAAKLLHAGFKGRVTGWGNR 144
Query: 65  RH 66
           R 
Sbjct: 145 RE 146

>pdb|3PLK|A Chain A, Bovine Trypsin Variant X(Tripleile227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+   + ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|3PWB|A Chain A, Bovine Trypsin Variant X(Tripleglu217ile227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+   + ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|3PMJ|A Chain A, Bovine Trypsin Variant X(Tripleile227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+   + ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|1V2K|T Chain T, Factor Xa Specific Inhibitor In Complex With Bovine Trypsin Variant X(Triple.Glu)bt.D2 Length = 223

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+   + ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|4B2A|A Chain A, Structure Of The Factor Xa-Like Trypsin Variant Triple-Ala (Tga) In Complex With Eglin C Length = 223

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+   + ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|4B1T|A Chain A, Structure Of The Factor Xa-Like Trypsin Variant Triple-Ala ( Ta) In Complex With Eglin C Length = 223

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+   + ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|1EKB|B Chain B, The Serine Protease Domain Of Enteropeptidase Bound To Inhibitor Val- Asp-asp-asp-asp-lys-chloromethane Length = 235

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 8   QSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQT-VKLVGKSATVAGWGRTRH 66
           Q  ++P Y+     ND+A++ ++  V +  +I P+CLP++  V   G+  ++AGWG   +
Sbjct: 77  QIVINPHYNKRRKNNDIAMMHLEMKVNYTDYIQPICLPEENQVFPPGRICSIAGWGALIY 136
Query: 67  ASSLSSAI 74
             S +  +
Sbjct: 137 QGSTADVL 144

>pdb|1EKB|B Chain B, The Serine Protease Domain Of Enteropeptidase Bound To Inhibitor Val- Asp-asp-asp-asp-lys-chloromethane Length = 235

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 16/49 (32%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 81  SNDVALIKIDKDVVFKQHIIPVCLPDQT-VKLVGKSATVAGWGRTRHAG 128
           +ND+A++ ++  V +  +I P+CLP++  V   G+  ++AGWG   + G
Sbjct: 90  NNDIAMMHLEMKVNYTDYIQPICLPEENQVFPPGRICSIAGWGALIYQG 138

>pdb|3UNQ|A Chain A, Bovine Trypsin Variant X(Triplephe227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+   + ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|1V2N|T Chain T, Potent Factor Xa Inhibitor In Complex With Bovine Trypsin Variant X(99175190)BT Length = 223

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+   + ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|4B2B|A Chain A, Structure Of The Factor Xa-Like Trypsin Variant Triple-Ala (Tgpa) In Complex With Eglin C Length = 223

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+   + ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|1Y59|T Chain T, Dianhydrosugar-Based Benzamidine, Factor Xa Specific Inhibitor In Complex With Bovine Trypsin Mutant Length = 223

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+   + ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|4B2C|A Chain A, Structure Of The Factor Xa-Like Trypsin Variant Triple-Ala (Tpa) In Complex With Eglin C Length = 223

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+   + ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|3UQV|A Chain A, Bovine Trypsin Variant X(Triplephe227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+   + ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|3UNS|A Chain A, Bovine Trypsin Variant X(Triplephe227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+   + ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|3UWI|A Chain A, Bovine Trypsin Variant X(Tripleglu217phe227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+   + ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSETYNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|4GAW|A Chain A, Crystal Structure Of Active Human Granzyme H Length = 226

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 18/79 (22%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSL 70
           HP Y+P +F ND+ L+++++   +   + P+ LP    ++  G+  +VAGWG    ++  
Sbjct: 77  HPAYNPKNFSNDIMLLQLERKAKWTTAVRPLRLPSSKAQVKPGQLCSVAGWGYVSMSTLA 136
Query: 71  SSAIPTYVSISNDVALIKI 89
           ++     +++  D    ++
Sbjct: 137 TTLQEVLLTVQKDCQCERL 155

>pdb|1DLK|B Chain B, Crystal Structure Analysis Of Delta-Chymotrypsin Bound To A Peptidyl Chloromethyl Ketone Inhibitor Length = 230

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 3   KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGW 61
           KL   + F + +Y+     ND+ L+K+     F Q +  VCLP  +     G +    GW
Sbjct: 67  KLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGW 126
Query: 62  GRTRHASS 69
           G TR+ ++
Sbjct: 127 GLTRYTNA 134

>pdb|1DLK|B Chain B, Crystal Structure Analysis Of Delta-Chymotrypsin Bound To A Peptidyl Chloromethyl Ketone Inhibitor Length = 230

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 78  VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH 126
           ++I+ND+ L+K+     F Q +  VCLP  +     G +    GWG TR+
Sbjct: 82  LTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRY 131

>pdb|2EEK|A Chain A, Crystal Structure Of Atlantic Cod Trypsin Complexed With Benzamidine Length = 220

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRT 64
           HP YS  +  ND+ LIK+ K     Q++  V LP +         TV+GWG T
Sbjct: 73  HPNYSSYNINNDIMLIKLTKPATLNQYVHAVALPTECAADA-TMCTVSGWGNT 124

>pdb|2CGA|A Chain A, Bovine Chymotrypsinogen A. X-Ray Crystal Structure Analysis And Refinement Of A New Crystal Form At 1.8 Angstroms Resolution Length = 245

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 3   KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGW 61
           KL   + F + +Y+     ND+ L+K+     F Q +  VCLP  +     G +    GW
Sbjct: 82  KLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGW 141
Query: 62  GRTRHASS 69
           G TR+ ++
Sbjct: 142 GLTRYTNA 149

>pdb|2CGA|A Chain A, Bovine Chymotrypsinogen A. X-Ray Crystal Structure Analysis And Refinement Of A New Crystal Form At 1.8 Angstroms Resolution Length = 245

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 78  VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH 126
           ++I+ND+ L+K+     F Q +  VCLP  +     G +    GWG TR+
Sbjct: 97  LTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRY 146

>pdb|1MTN|B Chain B, Bovine Alpha-Chymotrypsin:bpti Crystallization Length = 131

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 3   KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGW 61
           KL   + F + +Y+     ND+ L+K+     F Q +  VCLP  +     G +    GW
Sbjct: 67  KLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGW 126
Query: 62  GRTRH 66
           G TR+
Sbjct: 127 GLTRY 131

>pdb|1MTN|B Chain B, Bovine Alpha-Chymotrypsin:bpti Crystallization Length = 131

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 78  VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH 126
           ++I+ND+ L+K+     F Q +  VCLP  +     G +    GWG TR+
Sbjct: 82  LTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRY 131

>pdb|3VEQ|B Chain B, A Binary Complex Betwwen Bovine Pancreatic Trypsin And A Engineered Mutant Trypsin Inhibitor Length = 223

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+ +   ND+ LIK+         +  V LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASVSLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|3V0X|A Chain A, Bovine Trypsin Variant X(Tripleglu217phe227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+   + ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSETYNNDIMLIKLKSAASLXSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|2D8W|A Chain A, Structure Of Hyper-Vil-Trypsin Length = 223

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+ +   ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|1V2U|T Chain T, Benzamidine In Complex With Bovine Trypsin Varinat X(Ssai) Bt.D1 Length = 223

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+ +   ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|1V2O|T Chain T, Trypsin Inhibitor In Complex With Bovine Trypsin Variant X(Ssyi)bt.B4 Length = 223

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+ +   ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|1V2Q|T Chain T, Trypsin Inhibitor In Complex With Bovine Trypsin Variant X(Sswi)bt.B4 Length = 223

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+ +   ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|2ZGC|A Chain A, Crystal Structure Of Active Human Granzyme M Length = 240

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 2   FKLNTRQSFVHPQYSP-SDFRNDVALIKIDKDVVFKQHIIPVCLPDQ-TVKLVGKSATVA 59
              + + +  HP+Y P     ND+AL+++D  V   + I P+ LP +  V   G   ++A
Sbjct: 64  LTFHIKAAIQHPRYKPVPALENDLALLQLDGKVKPSRTIRPLALPSKRQVVAAGTRCSMA 123
Query: 60  GWGRTRHASSLSSAI 74
           GWG T     LS  +
Sbjct: 124 GWGLTHQGGRLSRVL 138

>pdb|1V2J|T Chain T, Benzamidine In Complex With Bovine Trypsin Variant X(Ssri) Bt.C1 Length = 223

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+ +   ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|1TAW|A Chain A, Bovine Trypsin Complexed To Appi Length = 223

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+ +   ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|2TLD|E Chain E, Crystal Structure Of An Engineered Subtilisin Inhibitor Complexed With Bovine Trypsin Length = 220

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+ +   ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|1V2S|T Chain T, Benzamidine In Complex With Bovine Trypsin Variant X(Ssfi.Glu)bt.D1 Length = 223

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+ +   ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|5PTP|A Chain A, Structure Of Hydrolase (Serine Proteinase) Length = 223

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+ +   ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|1HJ9|A Chain A, Atomic Resolution Structures Of Trypsin Provide Insight Into Structural Radiation Damage Length = 223

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+ +   ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|1TAB|E Chain E, Structure Of The Trypsin-Binding Domain Of Bowman-Birk Type Protease Inhibitor And Its Interaction With Trypsin Length = 223

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+ +   ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|3OTJ|E Chain E, A Crystal Structure Of Trypsin Complexed With Bpti (Bovine Pancreatic Trypsin Inhibitor) By X-RayNEUTRON JOINT REFINEMENT Length = 223

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+ +   ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|1RFN|A Chain A, Human Coagulation Factor Ixa In Complex With P-Amino Benzamidine Length = 235

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 69  SLSSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQ---TVKLVGKSATVAGWGRTR 125
           + ++AI  Y   ++D+AL+++D+ +V   ++ P+C+ D+    + L   S  V+GWGR  
Sbjct: 78  NYNAAINKY---NHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVF 134
Query: 126 HAG 128
           H G
Sbjct: 135 HKG 137

>pdb|3KCG|H Chain H, Crystal Structure Of The Antithrombin-Factor Ixa- Pentasaccharide Complex Length = 235

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 69  SLSSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQ---TVKLVGKSATVAGWGRTR 125
           + ++AI  Y   ++D+AL+++D+ +V   ++ P+C+ D+    + L   S  V+GWGR  
Sbjct: 78  NYNAAINKY---NHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVF 134
Query: 126 HAG 128
           H G
Sbjct: 135 HKG 137

>pdb|1OPH|B Chain B, Non-Covalent Complex Between Alpha-1-Pi-Pittsburgh And S195a Trypsin Length = 243

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+ +   ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 85  ISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 143
Query: 64  TRHASS 69
           T+ + +
Sbjct: 144 TKSSGT 149

>pdb|1F0T|A Chain A, Bovine Trypsin Complexed With Rpr131247 Length = 243

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+ +   ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 85  ISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 143
Query: 64  TRHASS 69
           T+ + +
Sbjct: 144 TKSSGT 149

>pdb|1G3B|A Chain A, Bovine Beta-Trypsin Bound To Meta-Amidino Schiff Base Magnesium(Ii) Chelate Length = 228

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+ +   ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 70  ISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 128
Query: 64  TRHASS 69
           T+ + +
Sbjct: 129 TKSSGT 134

>pdb|1TGS|Z Chain Z, Three-Dimensional Structure Of The Complex Between Pancreatic Secretory Inhibitor (Kazal Type) And Trypsinogen At 1.8 Angstroms Resolution. Structure Solution, Crystallographic Refinement And Preliminary Structural Interpretation Length = 229

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+ +   ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 71  ISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 129
Query: 64  TRHASS 69
           T+ + +
Sbjct: 130 TKSSGT 135

>pdb|1ZZZ|A Chain A, Trypsin Inhibitors With Rigid Tripeptidyl Aldehydes Length = 237

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+ +   ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 79  ISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 137
Query: 64  TRHASS 69
           T+ + +
Sbjct: 138 TKSSGT 143

>pdb|1DAN|H Chain H, Complex Of Active Site Inhibited Human Blood Coagulation Factor Viia With Human Recombinant Soluble Tissue Factor Length = 254

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 8   QSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGWGR 63
           Q  +   Y P    +D+AL+++ + VV   H++P+CLP++T         + + V+GWG+
Sbjct: 75  QVIIPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQ 134
Query: 64  T--RHASSLS 71
              R A++L 
Sbjct: 135 LLDRGATALE 144

>pdb|1DAN|H Chain H, Complex Of Active Site Inhibited Human Blood Coagulation Factor Viia With Human Recombinant Soluble Tissue Factor Length = 254

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 35/54 (64%), Gaps = 6/54 (11%)
Query: 76  TYV--SISNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGWGR 123
           TYV  + ++D+AL+++ + VV   H++P+CLP++T         + + V+GWG+
Sbjct: 81  TYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQ 134

>pdb|2FI4|E Chain E, Crystal Structure Of A Bpti Variant (Cys14->ser) In Complex With Trypsin Length = 223

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+ +   ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNSNTLNNDIMLIKLKSAASLXSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|2QY0|B Chain B, Active Dimeric Structure Of The Catalytic Domain Of C1r Reveals Enzyme-product Like Contacts Length = 242

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 7   RQSFVHPQY---SPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ-TVKLVGKSATVAGWG 62
           R+  VHP Y      +F  D+AL++++  V    +++P+CLPD  T   +G    V+G+G
Sbjct: 75  RRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFG 134

>pdb|3BN9|B Chain B, Crystal Structure Of Mt-Sp1 In Complex With Fab Inhibitor E2 Length = 241

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQT-VKLVGKSATVAGWGRTRHASS 69
           HP ++   F  D+AL++++K   +   + P+ LPD + V   GK+  V GWG T++  +
Sbjct: 86  HPFFNDFTFDYDIALLELEKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYGGT 144

>pdb|3ELA|H Chain H, Crystal Structure Of Active Site Inhibited Coagulation Factor Viia Mutant In Complex With Soluble Tissue Factor Length = 254

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 8   QSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGWGR 63
           Q  +   Y P    +D+AL+++ + VV   H++P+CLP++T         + + V+GWG+
Sbjct: 75  QVIIPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQ 134
Query: 64  T--RHASSL 70
              R A++L
Sbjct: 135 LLDRGATAL 143

>pdb|3ELA|H Chain H, Crystal Structure Of Active Site Inhibited Coagulation Factor Viia Mutant In Complex With Soluble Tissue Factor Length = 254

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 35/54 (64%), Gaps = 6/54 (11%)
Query: 76  TYV--SISNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGWGR 123
           TYV  + ++D+AL+++ + VV   H++P+CLP++T         + + V+GWG+
Sbjct: 81  TYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQ 134

>pdb|1MD7|A Chain A, Monomeric Structure Of The Zymogen Of Complement Protease C1r Length = 328

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 7   RQSFVHPQY---SPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ-TVKLVGKSATVAGWG 62
           R+  VHP Y      +F  D+AL++++  V    +++P+CLPD  T   +G    V+G+G
Sbjct: 164 RRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFG 223

>pdb|1MD8|A Chain A, Monomeric Structure Of The Active Catalytic Domain Of Complement Protease C1r Length = 329

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 7   RQSFVHPQY---SPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ-TVKLVGKSATVAGWG 62
           R+  VHP Y      +F  D+AL++++  V    +++P+CLPD  T   +G    V+G+G
Sbjct: 164 RRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFG 223

>pdb|3TJU|A Chain A, Crystal Structure Of Human Granzyme H With An Inhibitor Length = 226

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/79 (21%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSL 70
           HP Y+P +F N++ L+++++   +   + P+ LP    ++  G+  +VAGWG    ++  
Sbjct: 77  HPAYNPKNFSNNIMLLQLERKAKWTTAVRPLRLPSSKAQVKPGQLCSVAGWGYVSMSTLA 136
Query: 71  SSAIPTYVSISNDVALIKI 89
           ++     +++  D    ++
Sbjct: 137 TTLQEVLLTVQKDCQCERL 155

>pdb|1KIG|H Chain H, Bovine Factor Xa Length = 241

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD----QTVKLVGKSATVAGWGRTRHA 67
           H ++    +  D+A++++   + F++++ P CLP+    +   +  K+  V+G+GRT   
Sbjct: 77  HSRFVKETYDFDIAVLRLKTPIRFRRNVAPACLPEKDWAEATLMTQKTGIVSGFGRTHEK 136
Query: 68  SSLSSAI 74
             LSS +
Sbjct: 137 GRLSSTL 143

>pdb|4F4O|C Chain C, Structure Of The Haptoglobin-Haemoglobin Complex Length = 347

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 15  YSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRT 64
           + P +   D+ LIK+ + V   + ++P+CLP +    VG    V+GWGR 
Sbjct: 179 FHPDNSTVDIGLIKLKQKVPVNERVMPICLPSKDYVNVGLVGYVSGWGRN 228

>pdb|4F4O|C Chain C, Structure Of The Haptoglobin-Haemoglobin Complex Length = 347

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 83  DVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAGHKE 131
           D+ LIK+ + V   + ++P+CLP +    VG    V+GWGR  +    E
Sbjct: 187 DIGLIKLKQKVPVNERVMPICLPSKDYVNVGLVGYVSGWGRNANLNFTE 235

>pdb|1NTP|A Chain A, Use Of The Neutron Diffraction HD EXCHANGE TECHNIQUE TO Determine The Conformational Dynamics Of Trypsin Length = 223

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y  +   ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYDSNTLNNDIMLIKLKSAASLDSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|2ZGJ|A Chain A, Crystal Structure Of D86n-gzmm Complexed With Its Optimal Synthesized Substrate Length = 240

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 2   FKLNTRQSFVHPQYSP-SDFRNDVALIKIDKDVVFKQHIIPVCLPDQ-TVKLVGKSATVA 59
              + + +  HP+Y P     N++AL+++D  V   + I P+ LP +  V   G   ++A
Sbjct: 64  LTFHIKAAIQHPRYKPVPALENNLALLQLDGKVKPSRTIRPLALPSKRQVVAAGTRCSMA 123
Query: 60  GWGRTRHASSLSSAI 74
           GWG T     LS  +
Sbjct: 124 GWGLTHQGGRLSRVL 138

>pdb|4AN7|A Chain A, Kunitz Type Trypsin Inhibitor Complex With Porcine Trypsin Length = 231

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           +N  +   HP ++ +   ND+ LIK+         +  V LP ++    G    ++GWG 
Sbjct: 73  INAAKIITHPNFNGNTLDNDIMLIKLSSPATLNSRVATVSLP-RSCAAAGTECLISGWGN 131
Query: 64  TRHASS 69
           T+ + S
Sbjct: 132 TKSSGS 137

>pdb|1TFX|A Chain A, Complex Of The Second Kunitz Domain Of Tissue Factor Pathway Inhibitor With Porcine Trypsin Length = 223

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           +N  +   HP ++ +   ND+ LIK+         +  V LP ++    G    ++GWG 
Sbjct: 65  INAAKIITHPNFNGNTLDNDIMLIKLSSPATLNSRVATVSLP-RSCAAAGTECLISGWGN 123
Query: 64  TRHASS 69
           T+ + S
Sbjct: 124 TKSSGS 129

>pdb|3MYW|A Chain A, The Bowman-Birk Type Inhibitor From Mung Bean In Ternary Complex With Porcine Trypsin Length = 223

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           +N  +   HP ++ +   ND+ LIK+         +  V LP ++    G    ++GWG 
Sbjct: 65  INAAKIITHPNFNGNTLDNDIMLIKLSSPATLNSRVATVSLP-RSCAAAGTECLISGWGN 123
Query: 64  TRHASS 69
           T+ + S
Sbjct: 124 TKSSGS 129

>pdb|2A31|A Chain A, Trypsin In Complex With Borate Length = 223

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           +N  +   HP ++ +   ND+ LIK+         +  V LP ++    G    ++GWG 
Sbjct: 65  INAAKIITHPNFNGNTLDNDIMLIKLSSPATLNSRVATVSLP-RSCAAAGTECLISGWGN 123
Query: 64  TRHASS 69
           T+ + S
Sbjct: 124 TKSSGS 129

>pdb|1GPZ|A Chain A, The Crystal Structure Of The Zymogen Catalytic Domain Of Complement Protease C1r Length = 399

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 7   RQSFVHPQYSPSD---FRNDVALIKIDKDVVFKQHIIPVCLPDQ-TVKLVGKSATVAGWG 62
           R+  VHP Y   +   F  D+AL++++  V    +++P+CLPD  T   +G    V+G+G
Sbjct: 232 RRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFG 291

>pdb|1A0J|A Chain A, Crystal Structure Of A Non-Psychrophilic Trypsin From A Cold-Adapted Fish Species. Length = 223

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 11  VHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS 69
           +HP Y+  +  ND+ LIK+ K      ++  V LP       G    V+GWG    +SS
Sbjct: 72  MHPSYNSRNLDNDIMLIKLSKPASLNSYVSTVALPSSCAS-SGTRCLVSGWGNLSGSSS 129

>pdb|1MCT|A Chain A, The Refined 1.6 Angstroms Resolution Crystal Structure Of The Complex Formed Between Porcine Beta-trypsin And Mcti-a, A Trypsin Inhibitor Of Squash Family Length = 223

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           +N  +   HP ++ +   ND+ LIK+         +  V LP ++    G    ++GWG 
Sbjct: 65  INAAKIITHPNFNGNTLDNDIMLIKLSSPATLNSRVATVSLP-RSCAAAGTECLISGWGN 123
Query: 64  TRHASS 69
           T+ + S
Sbjct: 124 TKSSGS 129

>pdb|2F91|A Chain A, 1.2a Resolution Structure Of A Crayfish Trypsin Complexed With A Peptide Inhibitor, Sgti Length = 237

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 77  YVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAGH 129
           Y  + ND++L+K+   + F  ++ P+ LP+Q     G    V GWG T   G+
Sbjct: 90  YNLLDNDISLLKLSGSLTFNDNVAPIALPEQGHTATGD-VIVTGWGTTSEGGN 141

>pdb|3DFJ|A Chain A, Crystal Structure Of Human Prostasin Length = 263

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV-GKSATVAGWGRTRHASSL 70
           HP Y     + D+AL+++ + + F ++I P+ LP        G   TV GWG    + SL
Sbjct: 79  HPSYLQEGSQGDIALLQLSRPITFSRYIRPISLPAANASFPNGLHCTVTGWGHVAPSVSL 138
Query: 71  SSAIP 75
            +  P
Sbjct: 139 LTPKP 143

>pdb|1ELV|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Complement C1s Protease Length = 333

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 4   LNTRQSFVHPQY-------SPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK---LVG 53
           L     F+HP +         ++F ND+AL+++   V     + P+CLP  +     + G
Sbjct: 148 LTPEHVFIHPGWKLLAVPEGRTNFDNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDG 207
Query: 54  KSATVAGWGRTR 65
               ++GWGRT 
Sbjct: 208 DLGLISGWGRTE 219

>pdb|1AN1|E Chain E, Leech-Derived Tryptase InhibitorTRYPSIN COMPLEX Length = 223

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           +N  +   HP ++ +   ND+ LIK+         +  V LP ++    G    ++GWG 
Sbjct: 65  INAAKIITHPNFNGNTLDNDIMLIKLSSPATLXSRVATVSLP-RSCAAAGTECLISGWGN 123
Query: 64  TRHASS 69
           T+ + S
Sbjct: 124 TKSSGS 129

>pdb|2Y5F|A Chain A, Factor Xa - Cation Inhibitor Complex Length = 234

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 15/67 (22%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD----QTVKLVGKSATVAGWGRTRHA 67
           H +++   +  D+A++++   + F+ ++ P CLP+    ++  +  K+  V+G+GRT   
Sbjct: 77  HNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEK 136
Query: 68  SSLSSAI 74
              S+ +
Sbjct: 137 GEQSTRL 143

>pdb|2BOK|A Chain A, Factor Xa- Cation Length = 241

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 15/67 (22%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD----QTVKLVGKSATVAGWGRTRHA 67
           H +++   +  D+A++++   + F+ ++ P CLP+    ++  +  K+  V+G+GRT   
Sbjct: 77  HNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEK 136
Query: 68  SSLSSAI 74
              S+ +
Sbjct: 137 GEQSTRL 143

>pdb|3GYL|B Chain B, Structure Of Prostasin At 1.3 Angstroms Resolution In Complex With A Calcium Ion. Length = 261

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV-GKSATVAGWGRTRHASSL 70
           HP Y     + D+AL+++ + + F ++I P+ LP        G   TV GWG    + SL
Sbjct: 79  HPSYLQEGSQGDIALLQLSRPITFSRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVSL 138
Query: 71  SSAIP 75
            +  P
Sbjct: 139 LTPKP 143

>pdb|3E0P|B Chain B, The X-Ray Structure Of Human Prostasin In Complex With A Covalent Benzoxazole Inhibitor Length = 271

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV-GKSATVAGWGRTRHASSL 70
           HP Y     + D+AL+++ + + F ++I P+ LP        G   TV GWG    + SL
Sbjct: 79  HPSYLQEGSQGDIALLQLSRPITFSRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVSL 138
Query: 71  SSAIP 75
            +  P
Sbjct: 139 LTPKP 143

>pdb|3G01|A Chain A, Structure Of Grc Mutant E192rE193G Length = 227

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV-GKSATVAGWGR 63
           HP Y+P D  ND+ L+K+ ++    + + P+ LP +   +  G    VAGWG+
Sbjct: 78  HPDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPRRNAHVKPGDECYVAGWGK 130

>pdb|2BQ6|B Chain B, Crystal Structure Of Factor Xa In Complex With 21 Length = 249

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 15/67 (22%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD----QTVKLVGKSATVAGWGRTRHA 67
           H +++   +  D+A++++   + F+ ++ P CLP+    ++  +  K+  V+G+GRT   
Sbjct: 92  HNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEK 151
Query: 68  SSLSSAI 74
              S+ +
Sbjct: 152 GRQSTRL 158

>pdb|3FZZ|A Chain A, Structure Of Grc Length = 227

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV-GKSATVAGWGR 63
           HP Y+P D  ND+ L+K+ ++    + + P+ LP +   +  G    VAGWG+
Sbjct: 78  HPDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPRRNAHVKPGDECYVAGWGK 130

>pdb|1XKA|C Chain C, Factor Xa Complexed With A Synthetic Inhibitor Fx-2212a,(2s)-(3'- Amidino-3-Biphenylyl)-5-(4-Pyridylamino)pentanoic Acid Length = 235

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 15/67 (22%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD----QTVKLVGKSATVAGWGRTRHA 67
           H +++   +  D+A++++   + F+ ++ P CLP+    ++  +  K+  V+G+GRT   
Sbjct: 77  HNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEK 136
Query: 68  SSLSSAI 74
              S+ +
Sbjct: 137 GRQSTRL 143

>pdb|2RA3|A Chain A, Human Cationic Trypsin Complexed With Bovine Pancreatic Trypsin Inhibitor (bpti) Length = 224

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           +N  +   HPQY      ND+ LIK+    V   H+  + LP       G    ++GWG 
Sbjct: 65  INAAKIIRHPQYDRKTLNNDIMLIKLSSRAVINAHVSTISLPTAP-PATGTKCLISGWGN 123
Query: 64  TRHASS 69
           T  + +
Sbjct: 124 TASSGA 129

>pdb|1HCG|A Chain A, Structure Of Human Des(1-45) Factor Xa At 2.2 Angstroms Resolution Length = 241

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 15/67 (22%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD----QTVKLVGKSATVAGWGRTRHA 67
           H +++   +  D+A++++   + F+ ++ P CLP+    ++  +  K+  V+G+GRT   
Sbjct: 77  HNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEK 136
Query: 68  SSLSSAI 74
              S+ +
Sbjct: 137 GRQSTRL 143

>pdb|1EZQ|A Chain A, Crystal Structure Of Human Coagulation Factor Xa Complexed With Rpr128515 Length = 254

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 15/67 (22%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD----QTVKLVGKSATVAGWGRTRHA 67
           H +++   +  D+A++++   + F+ ++ P CLP+    ++  +  K+  V+G+GRT   
Sbjct: 77  HNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEK 136
Query: 68  SSLSSAI 74
              S+ +
Sbjct: 137 GRQSTRL 143

>pdb|3ENS|B Chain B, Crystal Structure Of Human Fxa In Complex With Methyl (2z)-3-[(3- Chloro-1h-indol-7-yl)amino]-2-cyano-3-{[(3s)-2-oxo-1-(2- oxo-2- Pyrrolidin-1-ylethyl)azepan-3-yl]amino}acrylate Length = 238

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 15/67 (22%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD----QTVKLVGKSATVAGWGRTRHA 67
           H +++   +  D+A++++   + F+ ++ P CLP+    ++  +  K+  V+G+GRT   
Sbjct: 77  HNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEK 136
Query: 68  SSLSSAI 74
              S+ +
Sbjct: 137 GRQSTRL 143

>pdb|1FJS|A Chain A, Crystal Structure Of The Inhibitor Zk-807834 (Ci-1031) Complexed With Factor Xa Length = 234

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 15/67 (22%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD----QTVKLVGKSATVAGWGRTRHA 67
           H +++   +  D+A++++   + F+ ++ P CLP+    ++  +  K+  V+G+GRT   
Sbjct: 77  HNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEK 136
Query: 68  SSLSSAI 74
              S+ +
Sbjct: 137 GRQSTRL 143

>pdb|1C5M|D Chain D, Structural Basis For Selectivity Of A Small Molecule, S1- Binding, Sub-Micromolar Inhibitor Of Urokinase Type Plasminogen Activator Length = 255

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 15/67 (22%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD----QTVKLVGKSATVAGWGRTRHA 67
           H +++   +  D+A++++   + F+ ++ P CLP+    ++  +  K+  V+G+GRT   
Sbjct: 77  HNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEK 136
Query: 68  SSLSSAI 74
              S+ +
Sbjct: 137 GRQSTRL 143

>pdb|2GD4|H Chain H, Crystal Structure Of The Antithrombin-S195a Factor Xa-Pentasaccharide Complex Length = 241

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 15/67 (22%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD----QTVKLVGKSATVAGWGRTRHA 67
           H +++   +  D+A++++   + F+ ++ P CLP+    ++  +  K+  V+G+GRT   
Sbjct: 77  HNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEK 136
Query: 68  SSLSSAI 74
              S+ +
Sbjct: 137 GRQSTRL 143

>pdb|1MQ5|A Chain A, Crystal Structure Of 3-chloro-n-[4-chloro-2-[[(4-chlorophenyl) Amino]carbonyl]phenyl]-4-[(4-methyl-1- piperazinyl)methyl]-2- Thiophenecarboxamide Complexed With Human Factor Xa Length = 233

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 15/67 (22%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD----QTVKLVGKSATVAGWGRTRHA 67
           H +++   +  D+A++++   + F+ ++ P CLP+    ++  +  K+  V+G+GRT   
Sbjct: 77  HNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEK 136
Query: 68  SSLSSAI 74
              S+ +
Sbjct: 137 GRQSTRL 143

>pdb|1FAX|A Chain A, Coagulation Factor Xa Inhibitor Complex Length = 254

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 15/67 (22%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 12  HPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD----QTVKLVGKSATVAGWGRTRHA 67
           H +++   +  D+A++++   + F+ ++ P CLP+    ++  +  K+  V+G+GRT   
Sbjct: 77  HNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEK 136
Query: 68  SSLSSAI 74
              S+ +
Sbjct: 137 GRQSTRL 143

>pdb|1AKS|A Chain A, Crystal Structure Of The First Active Autolysate Form Of The Porcine Alpha Trypsin Length = 125

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           +N  +   HP ++ +   ND+ LIK+         +  V LP ++    G    ++GWG 
Sbjct: 65  INAAKIITHPNFNGNTLDNDIMLIKLSSPATLNSRVATVSLP-RSCAAAGTECLISGWGN 123
Query: 64  TR 65
           T+
Sbjct: 124 TK 125

>pdb|1EPT|B Chain B, Refined 1.8 Angstroms Resolution Crystal Structure Of Porcine Epsilon-Trypsin Length = 82

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 4  LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
          +N  +   HP ++ +   ND+ LIK+         +  V LP ++    G    ++GWG 
Sbjct: 22 INAAKIITHPNFNGNTLDNDIMLIKLSSPATLNSRVATVSLP-RSCAAAGTECLISGWGN 80
Query: 64 TR 65
          T+
Sbjct: 81 TK 82

>pdb|2JET|B Chain B, Crystal Structure Of A Trypsin-Like Mutant (S189d, A226g) Chymotrypsin Length = 128

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWG 62
           L   Q F +P+++    RND+ L+K+     F + +  VCLP+       G      GWG
Sbjct: 65  LKIAQVFKNPKFNMFTVRNDITLLKLATPAQFSETVSAVCLPNVDDDFPPGTVCATTGWG 124
Query: 63  RTRH 66
           +T++
Sbjct: 125 KTKY 128

>pdb|1FY3|A Chain A, [g175q]hbp, A Mutant Of Human Heparin Binding Protein (cap37) Length = 225

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 15  YSPSDFRNDVALIKIDKDVVFKQH--IIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSS 72
           Y P    ND+ L+++D++        I+P+ L + TV+  G    VAGWG  R    LS 
Sbjct: 81  YDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNATVE-AGTRCQVAGWGSQRSGGRLSR 139
Query: 73  AIPTYVSIS 81
             P +V+++
Sbjct: 140 -FPRFVNVT 147

>pdb|1A7S|A Chain A, Atomic Resolution Structure Of Hbp Length = 225

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 15  YSPSDFRNDVALIKIDKDVVFKQH--IIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSS 72
           Y P    ND+ L+++D++        I+P+ L + TV+  G    VAGWG  R    LS 
Sbjct: 81  YDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNATVE-AGTRCQVAGWGSQRSGGRLSR 139
Query: 73  AIPTYVSIS 81
             P +V+++
Sbjct: 140 -FPRFVNVT 147

>pdb|1FY1|A Chain A, [r23s,F25e]hbp, A Mutant Of Human Heparin Binding Protein (Cap37) Length = 225

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 15  YSPSDFRNDVALIKIDKDVVFKQH--IIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSS 72
           Y P    ND+ L+++D++        I+P+ L + TV+  G    VAGWG  R    LS 
Sbjct: 81  YDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNATVE-AGTRCQVAGWGSQRSGGRLSR 139
Query: 73  AIPTYVSIS 81
             P +V+++
Sbjct: 140 -FPRFVNVT 147

>pdb|1HYL|A Chain A, The 1.8 A Structure Of Collagenase From Hypoderma Lineatum Length = 230

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLP---DQTVKLVGKSATVAG 60
           +N+ +   H  ++P  + NDVALIKI   V +  +I P+ LP   +   K     ATV+G
Sbjct: 69  VNSERIISHSMFNPDTYLNDVALIKI-PHVEYTDNIQPIRLPSGEELNNKFENIWATVSG 127
Query: 61  WGRTR 65
           WG++ 
Sbjct: 128 WGQSN 132

>pdb|1FIW|A Chain A, Three-Dimensional Structure Of Beta-Acrosin From Ram Spermatozoa Length = 290

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 11  VHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD--QTVKLVGKSATVAGWG 62
           +H +YS S   ND+AL+KI   V     I P CLP        V ++  VAGWG
Sbjct: 89  IHEKYSASSEANDIALMKITPPVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWG 142

>pdb|3QK1|A Chain A, Crystal Structure Of Enterokinase-Like Trypsin Variant Length = 229

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 4   LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
           ++  +S VHP Y+     ND+ LIK+         +  + LP       G    ++GWG 
Sbjct: 65  ISASKSIVHPSYNKRRKNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGN 123
Query: 64  TRHASS 69
           T+ + +
Sbjct: 124 TKSSGT 129

>pdb|1M9U|A Chain A, Crystal Structure Of Earthworm Fibrinolytic Enzyme Component A From Eisenia Fetida Length = 241

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/133 (20%), Positives = 54/133 (40%), Gaps = 25/133 (18%)
Query: 11  VHPQYSP--SDFRNDVALIKIDKDVVFKQHIIPVCLP-DQTVKLVGKSATVAGWGRTRHA 67
           +H  Y    + + ND+A++ +   +    +I    LP +      G +  ++GWGRT   
Sbjct: 79  MHENYGAGTASYSNDIAILHLATSISLGGNIQAAVLPANNNNDYAGTTCVISGWGRTDGT 138
Query: 68  SSL-----SSAIPTYVSISNDVALIKIDKDVVFKQHII-----------------PVCLP 105
           ++L      S+IP   +     A++ +    ++  HI                  P+  P
Sbjct: 139 NNLPDILQKSSIPVITTAQCTAAMVGVGGANIWDNHICVQDPAGNTGACNGDSGGPLNCP 198
Query: 106 DQTVKLVGKSATV 118
           D   ++VG ++ V
Sbjct: 199 DGGTRVVGVTSWV 211

>pdb|1EUF|A Chain A, Bovine Duodenase(New Serine Protease), Crystal Structure Length = 227

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 7   RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGR 63
           R+   HP Y+     ND+ L+K+ +       + P+ LP    ++  G   +VAGWGR
Sbjct: 72  RRPIPHPDYNDETLANDIMLLKLTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGR 129

>pdb|2QXG|A Chain A, Crystal Structure Of Human Kallikrein 7 In Complex With Ala- Ala-phe-chloromethylketone Length = 224

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3   KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWG 62
           ++   +SF HP YS     ND+ L+K++        +  V LP +  +  G + TV+GWG
Sbjct: 63  RIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKKVRLPSR-CEPPGTTCTVSGWG 121
Query: 63  RT 64
            T
Sbjct: 122 TT 123

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	132
1ym0_A	238	Fibrinotic enzyme component B; two chains, glycosy	3e-21
1ym0_A	238	Fibrinotic enzyme component B; two chains, glycosy	1e-15
2b9l_A	394	Prophenoloxidase activating factor; CLIP domain, e	7e-21
2b9l_A	394	Prophenoloxidase activating factor; CLIP domain, e	3e-15
2xxl_A	408	GRAM-positive specific serine protease, isoform B;	2e-20
2xxl_A	408	GRAM-positive specific serine protease, isoform B;	2e-14
2olg_A	278	Pro-phenoloxidase activating enzyme-I; prophenolox	5e-20
2olg_A	278	Pro-phenoloxidase activating enzyme-I; prophenolox	3e-15
2qxi_A	224	Kallikrein-7; S1 pocket, chloromethyl ketone, alte	7e-19
2qxi_A	224	Kallikrein-7; S1 pocket, chloromethyl ketone, alte	6e-12
1yph_C	131	Chymotrypsin A, chain B; serine protease, hydrolas	2e-18
1yph_C	131	Chymotrypsin A, chain B; serine protease, hydrolas	9e-13
4dgj_A	235	Enteropeptidase catalytic light chain; serine prot	2e-18
4dgj_A	235	Enteropeptidase catalytic light chain; serine prot	7e-13
1eq9_A	222	Chymotrypsin; FIRE ANT, serine proteinase, hydrola	3e-18
1eq9_A	222	Chymotrypsin; FIRE ANT, serine proteinase, hydrola	2e-13
1azz_A	226	Collagenase; complex (serine protease/inhibitor),	4e-18
1azz_A	226	Collagenase; complex (serine protease/inhibitor),	3e-11
2psx_A	227	Kallikrein-5; zinc inhibition, stratum corneum, gl	7e-18
2psx_A	227	Kallikrein-5; zinc inhibition, stratum corneum, gl	2e-11
2any_A	241	Kininogenin, plasma kallikrein, light chain, fletc	7e-18
2any_A	241	Kininogenin, plasma kallikrein, light chain, fletc	2e-12
4e7n_A	238	Snake-venom thrombin-like enzyme; beta-barrel, hyd	1e-17
4e7n_A	238	Snake-venom thrombin-like enzyme; beta-barrel, hyd	2e-11
3ncl_A	241	Suppressor of tumorigenicity 14 protein; proteinas	1e-17
3ncl_A	241	Suppressor of tumorigenicity 14 protein; proteinas	1e-12
3mfj_A	223	Cationic trypsin; serine proteinase, hydrolase; 0.	1e-17
3mfj_A	223	Cationic trypsin; serine proteinase, hydrolase; 0.	3e-11
1fxy_A	228	Coagulation factor XA-trypsin chimera; protease, c	1e-17
1fxy_A	228	Coagulation factor XA-trypsin chimera; protease, c	2e-11
2f83_A	625	Coagulation factor XI; protease, apple domain, hyd	1e-17
2f83_A	625	Coagulation factor XI; protease, apple domain, hyd	2e-12
2bz6_H	254	Blood coagulation factor VIIA; serine protease, en	2e-17
2bz6_H	254	Blood coagulation factor VIIA; serine protease, en	1e-12
2oq5_A	232	Transmembrane protease, serine 11E; type II trans-	2e-17
2oq5_A	232	Transmembrane protease, serine 11E; type II trans-	2e-12
2f91_A	237	Hepatopancreas trypsin; trypsin, canonical inhibit	2e-17
2f91_A	237	Hepatopancreas trypsin; trypsin, canonical inhibit	3e-12
1fiw_A	290	Beta-acrosin heavy chain; anti-parallel beta-barre	2e-17
1fiw_A	290	Beta-acrosin heavy chain; anti-parallel beta-barre	5e-12
3bg8_A	238	Coagulation factor XIA light chain; protease inhib	2e-17
3bg8_A	238	Coagulation factor XIA light chain; protease inhib	3e-12
2f9n_A	245	Alpha I tryptase; serine proteinase, trypsin-like,	2e-17
2f9n_A	245	Alpha I tryptase; serine proteinase, trypsin-like,	9e-12
2qy0_B	242	Complement C1R subcomponent; serine protease, beta	2e-17
2qy0_B	242	Complement C1R subcomponent; serine protease, beta	7e-13
1gpz_A	399	Complement C1R component; hydrolase, activation, i	3e-17
1gpz_A	399	Complement C1R component; hydrolase, activation, i	1e-12
2aiq_A	231	Protein C activator; snake venom serine proteinase	4e-17
2aiq_A	231	Protein C activator; snake venom serine proteinase	2e-11
1aut_C	250	Activated protein C; serine proteinase, plasma cal	4e-17
1aut_C	250	Activated protein C; serine proteinase, plasma cal	6e-12
1lo6_A	223	Kallikrein 6, HK6; serine protease, human kallikre	5e-17
1lo6_A	223	Kallikrein 6, HK6; serine protease, human kallikre	1e-10
1md8_A	329	C1R complement serine protease; innate immunity, a	5e-17
1md8_A	329	C1R complement serine protease; innate immunity, a	1e-12
1pyt_D	251	TC, PCPA-TC, chymotrypsinogen C; ternary complex (	6e-17
1pyt_D	251	TC, PCPA-TC, chymotrypsinogen C; ternary complex (	2e-11
3gov_B	251	MAsp-1; complement, serine protease, beta barrel,	6e-17
3gov_B	251	MAsp-1; complement, serine protease, beta barrel,	1e-11
1hj8_A	222	Trypsin I; hydrolase, radiation damage, disulphide	7e-17
1hj8_A	222	Trypsin I; hydrolase, radiation damage, disulphide	7e-11
2jkh_A	241	Activated factor XA heavy chain; plasma, calcium,	7e-17
2jkh_A	241	Activated factor XA heavy chain; plasma, calcium,	2e-12
1mza_A	240	Pro-granzyme K; apoptosis, serine protease, S1 fam	7e-17
1mza_A	240	Pro-granzyme K; apoptosis, serine protease, S1 fam	1e-10
2bdy_A	289	Thrombin; thrombin, complex structure, hydrolase,	8e-17
2bdy_A	289	Thrombin; thrombin, complex structure, hydrolase,	1e-12
1m9u_A	241	Earthworm fibrinolytic enzyme; hydrolase, serine p	8e-17
1m9u_A	241	Earthworm fibrinolytic enzyme; hydrolase, serine p	4e-12
3nxp_A	424	Prethrombin-1; allostery, blood coagulation, hydro	1e-16
3nxp_A	424	Prethrombin-1; allostery, blood coagulation, hydro	9e-13
3rm2_H	259	Thrombin heavy chain; serine protease, kringle, hy	1e-16
3rm2_H	259	Thrombin heavy chain; serine protease, kringle, hy	1e-12
1a7s_A	225	Heparin binding protein; serine protease homolog,	1e-16
1a7s_A	225	Heparin binding protein; serine protease homolog,	6e-10
3s9c_A	234	Vipera russelli proteinase RVV-V gamma; serine pro	2e-16
3s9c_A	234	Vipera russelli proteinase RVV-V gamma; serine pro	8e-11
2xrc_A	565	Human complement factor I; immune system, hydrolas	2e-16
2xrc_A	565	Human complement factor I; immune system, hydrolas	8e-11
3gyl_B	261	Prostasin; ENAC, zymogen, divalent cation, channel	2e-16
3gyl_B	261	Prostasin; ENAC, zymogen, divalent cation, channel	2e-11
1t8o_A	245	Chymotrypsin A; chymotrypsin, serine proteinase, B	2e-16
1t8o_A	245	Chymotrypsin A; chymotrypsin, serine proteinase, B	2e-11
2xw9_A	228	Complement factor D; immune system, hydrolase, ser	2e-16
2xw9_A	228	Complement factor D; immune system, hydrolase, ser	3e-10
2bdg_A	223	Kallikrein-4; serine proteinase, S1 subsite, 70-80	2e-16
2bdg_A	223	Kallikrein-4; serine proteinase, S1 subsite, 70-80	1e-10
1rtf_B	252	(TC)-T-PA, two chain tissue plasminogen activator;	2e-16
1rtf_B	252	(TC)-T-PA, two chain tissue plasminogen activator;	2e-10
1pq7_A	224	Trypsin; ultra-high resolution, catalysis, hydrola	3e-16
1pq7_A	224	Trypsin; ultra-high resolution, catalysis, hydrola	5e-13
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	4e-16
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	1e-11
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	6e-16
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	1e-10
3h7t_A	235	Group 3 allergen smipp-S YVT004A06; hydrolase; 2.0	8e-16
3h7t_A	235	Group 3 allergen smipp-S YVT004A06; hydrolase; 2.0	2e-10
3tvj_B	242	Mannan-binding lectin serine protease 2 B chain; i	9e-16
3tvj_B	242	Mannan-binding lectin serine protease 2 B chain; i	1e-11
2z7f_E	218	Leukocyte elastase; serine protease, serine protea	1e-15
2z7f_E	218	Leukocyte elastase; serine protease, serine protea	5e-10
2hlc_A	230	Collagenase; serine protease, hydrolase, collagen	1e-15
2hlc_A	230	Collagenase; serine protease, hydrolase, collagen	2e-09
1orf_A	234	Granzyme A; hydrolase-hydrolase inhibitor complex;	1e-15
1orf_A	234	Granzyme A; hydrolase-hydrolase inhibitor complex;	4e-09
1npm_A	225	Neuropsin; serine proteinase, glycoprotein; HET: N	1e-15
1npm_A	225	Neuropsin; serine proteinase, glycoprotein; HET: N	2e-11
1iau_A	227	Granzyme B; hydrolase-hydrolase inhibitor complex;	2e-15
1iau_A	227	Granzyme B; hydrolase-hydrolase inhibitor complex;	6e-09
1fon_A	240	Procarboxypeptidase A-S6; truncated zymogen E, ser	2e-15
1fon_A	240	Procarboxypeptidase A-S6; truncated zymogen E, ser	1e-11
3h7o_A	228	Group 3 allergen smipp-S YV6023A04; hydrolase; 1.8	2e-15
3h7o_A	228	Group 3 allergen smipp-S YV6023A04; hydrolase; 1.8	2e-10
2wph_S	235	Coagulation factor IXA heavy chain; serine proteas	2e-15
2wph_S	235	Coagulation factor IXA heavy chain; serine proteas	2e-12
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	2e-15
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	2e-10
1z8g_A	372	Serine protease hepsin; serine protease hepsin, pr	2e-15
1z8g_A	372	Serine protease hepsin; serine protease hepsin, pr	5e-13
1elv_A	333	Complement C1S component; trypsin-like serin prote	3e-15
1elv_A	333	Complement C1S component; trypsin-like serin prote	1e-11
4ag1_A	226	Chymase; hydrolase-de novo protein complex, inhibi	5e-15
4ag1_A	226	Chymase; hydrolase-de novo protein complex, inhibi	1e-08
2zgc_A	240	Granzyme M; serine protease, cytolysis, glycoprote	5e-15
2zgc_A	240	Granzyme M; serine protease, cytolysis, glycoprote	1e-10
3fzz_A	227	Granzyme C; hydrolase, cytolysis, protease, serine	5e-15
3fzz_A	227	Granzyme C; hydrolase, cytolysis, protease, serine	2e-08
3s69_A	234	Thrombin-like enzyme defibrase; beta-barrel, serin	6e-15
3s69_A	234	Thrombin-like enzyme defibrase; beta-barrel, serin	3e-11
1cgh_A	224	Cathepsin G; inflammation, specificity, serine pro	6e-15
1cgh_A	224	Cathepsin G; inflammation, specificity, serine pro	9e-09
3beu_A	224	Trypsin, SGT; beta sheets, serine protease, hydrol	6e-15
3beu_A	224	Trypsin, SGT; beta sheets, serine protease, hydrol	5e-10
3rp2_A	224	RAT MAST cell protease II; serine proteinase; 1.90	6e-15
3rp2_A	224	RAT MAST cell protease II; serine proteinase; 1.90	1e-08
1sgf_A	240	7S NGF, nerve growth factor; growth factor (beta-N	8e-15
1sgf_A	240	7S NGF, nerve growth factor; growth factor (beta-N	8e-11
1euf_A	227	Duodenase; serine protease, dual specificity, hydr	8e-15
1euf_A	227	Duodenase; serine protease, dual specificity, hydr	2e-08
1elt_A	236	Elastase; serine proteinase; 1.61A {Salmo salar} S	8e-15
1elt_A	236	Elastase; serine proteinase; 1.61A {Salmo salar} S	2e-10
1gvk_B	240	Elastase 1, peptide inhibitor; hydrolase, serine p	8e-15
1gvk_B	240	Elastase 1, peptide inhibitor; hydrolase, serine p	1e-10
1bru_P	241	Elastase, PPE; serine protease, hydrolase; HET: 1N	1e-14
1bru_P	241	Elastase, PPE; serine protease, hydrolase; HET: 1N	3e-11
1ton_A	235	Tonin; hydrolase(serine proteinase); 1.80A {Rattus	2e-14
1ton_A	235	Tonin; hydrolase(serine proteinase); 1.80A {Rattus	1e-10
1ao5_A	237	Glandular kallikrein-13; serine protease, protein	2e-14
1ao5_A	237	Glandular kallikrein-13; serine protease, protein	8e-11
2zch_P	237	Prostate-specific antigen; human PSA, kallikrein r	2e-14
2zch_P	237	Prostate-specific antigen; human PSA, kallikrein r	3e-10
1yc0_A	283	Hepatocyte growth factor activator; hydrolase/inhi	3e-14
1yc0_A	283	Hepatocyte growth factor activator; hydrolase/inhi	6e-10
2r0l_A	248	Hepatocyte growth factor activator; serine proteas	3e-14
2r0l_A	248	Hepatocyte growth factor activator; serine proteas	1e-09
3mhw_U	247	Urokinase-type plasminogen activator; hydrolase, b	5e-14
3mhw_U	247	Urokinase-type plasminogen activator; hydrolase, b	2e-09
2jde_A	276	Urokinase-type plasminogen activator; plasminogen	5e-14
2jde_A	276	Urokinase-type plasminogen activator; plasminogen	2e-09
1gvz_A	237	Kallikrein-1E2; antigen, prostate specific antigen	1e-13
1gvz_A	237	Kallikrein-1E2; antigen, prostate specific antigen	3e-10
1rrk_A	497	Complement factor B; BB, hydrolase; 2.00A {Homo sa	2e-13
1rrk_A	497	Complement factor B; BB, hydrolase; 2.00A {Homo sa	8e-10
1ddj_A	247	Plasminogen; catalytic domain, blood clotting; 2.0	3e-13
1ddj_A	247	Plasminogen; catalytic domain, blood clotting; 2.0	5e-11
4dur_A	791	Plasminogen, serine protease; fibrinolysis, hydrol	5e-13
4dur_A	791	Plasminogen, serine protease; fibrinolysis, hydrol	4e-11
1fuj_A	221	PR3, myeloblastin; hydrolase, serine protease, gly	6e-13
1fuj_A	221	PR3, myeloblastin; hydrolase, serine protease, gly	9e-09
1spj_A	238	Kallikrein 1; serine protease, KLK1, HK1, hydrolas	2e-12
1spj_A	238	Kallikrein 1; serine protease, KLK1, HK1, hydrolas	5e-09
2asu_B	234	Hepatocyte growth factor-like protein; serine prot	2e-12
2asu_B	234	Hepatocyte growth factor-like protein; serine prot	4e-11
1si5_H	240	Scatter factor, hepatocyte growth factor, SF, hepa	4e-12
1si5_H	240	Scatter factor, hepatocyte growth factor, SF, hepa	3e-10
2pka_B	152	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	6e-12
2pka_B	152	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	7e-12
3hrz_D	741	Complement factor B; serine protease, glycosilated	1e-11
3hrz_D	741	Complement factor B; serine protease, glycosilated	4e-08
2odp_A	509	Complement C2; C3/C5 convertase, complement serin	2e-11
2odp_A	509	Complement C2; C3/C5 convertase, complement serin	2e-08

>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida} Length = 238

 Score = 84.2 bits (209), Expect = 3e-21
 Identities = 19/65 (29%), Positives = 31/65 (47%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS 69
           FV+  Y P+   NDV++IK    + F  ++ P+C PD     V + +  +GWG       
Sbjct: 78  FVNENYDPATLENDVSVIKTAVAITFDINVGPICAPDPANDYVYRKSQCSGWGTINSGGV 137

Query: 70  LSSAI 74
              A+
Sbjct: 138 CCPAV 142

>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida} Length = 238

 Score = 69.2 bits (170), Expect = 1e-15
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 75  PTY--VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
             Y   ++ NDV++IK    + F  ++ P+C PD     V + +  +GWG     G
Sbjct: 81  ENYDPATLENDVSVIKTAVAITFDINVGPICAPDPANDYVYRKSQCSGWGTINSGG 136

>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia} Length = 394

 Score = 85.3 bits (211), Expect = 7e-21
 Identities = 18/64 (28%), Positives = 31/64 (48%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS 69
            +H  ++P    NDVAL+ +D+ +V   +I  +CLP Q+          +GWG+    S 
Sbjct: 218 IIHSNFNPKTVVNDVALLLLDRPLVQADNIGTICLPQQSQIFDSTECFASGWGKKEFGSR 277

Query: 70  LSSA 73
              +
Sbjct: 278 HRYS 281

>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia} Length = 394

 Score = 69.9 bits (171), Expect = 3e-15
 Identities = 15/50 (30%), Positives = 26/50 (52%)

Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
           ++ NDVAL+ +D+ +V   +I  +CLP Q+          +GWG+     
Sbjct: 227 TVVNDVALLLLDRPLVQADNIGTICLPQQSQIFDSTECFASGWGKKEFGS 276

>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster} Length = 408

 Score = 84.2 bits (208), Expect = 2e-20
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD----QTVKLVGKSATVAGWGRTR 65
            +H +Y      +D+AL+K+++ V F++HI P+CLP     +       +  V GWG T 
Sbjct: 210 LIHEKYDARHIMHDIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTE 269

Query: 66  HASS 69
           + SS
Sbjct: 270 NGSS 273

>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster} Length = 408

 Score = 67.6 bits (165), Expect = 2e-14
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 4/52 (7%)

Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPD----QTVKLVGKSATVAGWGRTRH 126
            I +D+AL+K+++ V F++HI P+CLP     +       +  V GWG T +
Sbjct: 219 HIMHDIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTEN 270

>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia} Length = 278

 Score = 81.6 bits (202), Expect = 5e-20
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 3/63 (4%)

Query: 10  FVHPQYSPS--DFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH 66
             HP Y     D  +D+ALI++++ V F  +I PVCLP    ++ VG+  TV GWGRT  
Sbjct: 118 IQHPDYVDGSKDRYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRTET 177

Query: 67  ASS 69
              
Sbjct: 178 GQY 180

>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia} Length = 278

 Score = 68.9 bits (169), Expect = 3e-15
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 75  PTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH 126
                  +D+ALI++++ V F  +I PVCLP    ++ VG+  TV GWGRT  
Sbjct: 125 DGSKDRYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRTET 177

>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A Length = 224

 Score = 78.0 bits (193), Expect = 7e-19
 Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 7   RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH 66
            +SF HP YS     ND+ L+K++        +  V LP +     G + TV+GWG T  
Sbjct: 67  SKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKKVRLPSRCEP-PGTTCTVSGWGTTTS 125

Query: 67  ASSLSSAIPTYVS---ISNDV 84
                 +    V    IS   
Sbjct: 126 PDVTFPSDLMCVDVKLISPQD 146

>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A Length = 224

 Score = 59.5 bits (145), Expect = 6e-12
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 77  YVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
             +  ND+ L+K++        +  V LP +     G + TV+GWG T    
Sbjct: 77  TQTHVNDLMLVKLNSQARLSSMVKKVRLPSRCEP-PGTTCTVSGWGTTTSPD 127

>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ... Length = 131

 Score = 74.1 bits (183), Expect = 2e-18
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV-GKSATVAGWGRTRH 66
           F + +Y+     ND+ L+K+     F Q +  VCLP  +     G +    GWG TR+
Sbjct: 74  FKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRY 131

>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ... Length = 131

 Score = 59.9 bits (146), Expect = 9e-13
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 75  PTY--VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV-GKSATVAGWGRTRH 126
             Y  ++I+ND+ L+K+     F Q +  VCLP  +     G +    GWG TR+
Sbjct: 77  SKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRY 131

>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B Length = 235

 Score = 76.5 bits (189), Expect = 2e-18
 Identities = 15/64 (23%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
            ++P Y+     ND+A++ ++  V +  +I P+ LP++      G++ ++AGWG   +  
Sbjct: 79  VINPHYNRRRKDNDIAMMHLEFKVNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQG 138

Query: 69  SLSS 72
           + + 
Sbjct: 139 TTAD 142

>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B Length = 235

 Score = 61.8 bits (151), Expect = 7e-13
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 3/57 (5%)

Query: 75  PTY--VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
           P Y      ND+A++ ++  V +  +I P+ LP++      G++ ++AGWG   + G
Sbjct: 82  PHYNRRRKDNDIAMMHLEFKVNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQG 138

>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2 Length = 222

 Score = 76.0 bits (188), Expect = 3e-18
 Identities = 18/63 (28%), Positives = 27/63 (42%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS 69
            V+  Y     RNDVAL+ +   + F   + P+ L      L     T+ GWG TR   +
Sbjct: 74  VVNKNYDDFLLRNDVALVHLTNPIKFNDLVQPIKLSTNDEDLESNPCTLTGWGSTRLGGN 133

Query: 70  LSS 72
             +
Sbjct: 134 TPN 136

>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2 Length = 222

 Score = 63.3 bits (155), Expect = 2e-13
 Identities = 16/50 (32%), Positives = 23/50 (46%)

Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
            + NDVAL+ +   + F   + P+ L      L     T+ GWG TR  G
Sbjct: 83  LLRNDVALVHLTNPIKFNDLVQPIKLSTNDEDLESNPCTLTGWGSTRLGG 132

>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2 Length = 226

 Score = 75.6 bits (187), Expect = 4e-18
 Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 4/85 (4%)

Query: 3   KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWG 62
            + +    VH  Y+     ND+A+I++   V     I  V LP   V  VG   T  GWG
Sbjct: 67  TIQSTDFTVHENYNSFVISNDIAVIRLPVPVTLTAAIATVGLPSTDVG-VGTVVTPTGWG 125

Query: 63  RTRHASSLSSAIPTYVS---ISNDV 84
               ++   S +   V    +SN  
Sbjct: 126 LPSDSALGISDVLRQVDVPIMSNAD 150

>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2 Length = 226

 Score = 57.5 bits (140), Expect = 3e-11
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 80  ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
           ISND+A+I++   V     I  V LP   V  VG   T  GWG    + 
Sbjct: 84  ISNDIAVIRLPVPVTLTAAIATVGLPSTDVG-VGTVVTPTGWGLPSDSA 131

>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A* Length = 227

 Score = 75.3 bits (186), Expect = 7e-18
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 1/74 (1%)

Query: 7   RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH 66
            +S  HP YS     ND+ LIK+++ +   + + P+ +        G    V+GWG T+ 
Sbjct: 71  VKSIPHPGYSHPGHSNDLMLIKLNRRIRPTKDVRPINVSSHCPS-AGTKCLVSGWGTTKS 129

Query: 67  ASSLSSAIPTYVSI 80
                  +   ++I
Sbjct: 130 PQVHFPKVLQCLNI 143

>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A* Length = 227

 Score = 57.9 bits (141), Expect = 2e-11
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 77  YVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
           +   SND+ LIK+++ +   + + P+ +        G    V+GWG T+   
Sbjct: 81  HPGHSNDLMLIKLNRRIRPTKDVRPINVSSHCPS-AGTKCLVSGWGTTKSPQ 131

>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A* Length = 241

 Score = 75.3 bits (186), Expect = 7e-18
 Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
            +H  Y  S+  +D+ALIK+   + + +   P+ LP +     +  +  V GWG ++   
Sbjct: 80  IIHQNYKVSEGNHDIALIKLQAPLEYTEFQKPISLPSKGDTSTIYTNCWVTGWGFSKEKG 139

Query: 69  SLSS 72
            + +
Sbjct: 140 EIQN 143

>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A* Length = 241

 Score = 61.1 bits (149), Expect = 2e-12
 Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 3/57 (5%)

Query: 75  PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
             Y     ++D+ALIK+   + + +   P+ LP +     +  +  V GWG ++  G
Sbjct: 83  QNYKVSEGNHDIALIKLQAPLEYTEFQKPISLPSKGDTSTIYTNCWVTGWGFSKEKG 139

>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys} Length = 238

 Score = 74.9 bits (185), Expect = 1e-17
 Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 4/86 (4%)

Query: 2   FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGW 61
            ++   + F     + + +  D+ LI++D  V   +HI P  LP      VG    + GW
Sbjct: 67  TRVPKEKFFCLSSKNYTLWDKDIMLIRLDSPVKNSKHIAPFSLPSSPPS-VGSVCRIMGW 125

Query: 62  GRTRHASSLSSAIPTYVS---ISNDV 84
           GR          +P  V+   +  ++
Sbjct: 126 GRISPTEGTYPDVPHCVNINLLEYEM 151

>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys} Length = 238

 Score = 58.3 bits (142), Expect = 2e-11
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 76  TYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
            Y     D+ LI++D  V   +HI P  LP      VG    + GWGR     
Sbjct: 81  NYTLWDKDIMLIRLDSPVKNSKHIAPFSLPSSPPS-VGSVCRIMGWGRISPTE 132

>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} PDB: 3bn9_B* 3nps_A 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A* Length = 241

 Score = 74.9 bits (185), Expect = 1e-17
 Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
             HP ++   F  D+AL++++K   +   + P+ LPD +     GK+  V GWG T++  
Sbjct: 84  ISHPFFNDFTFDYDIALLELEKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYGG 143

Query: 69  SLSS 72
           + + 
Sbjct: 144 TGAL 147

>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} PDB: 3bn9_B* 3nps_A 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A* Length = 241

 Score = 61.1 bits (149), Expect = 1e-12
 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 3/57 (5%)

Query: 75  PTY--VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
           P +   +   D+AL++++K   +   + P+ LPD +     GK+  V GWG T++ G
Sbjct: 87  PFFNDFTFDYDIALLELEKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYGG 143

>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ... Length = 223

 Score = 74.5 bits (184), Expect = 1e-17
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 1/73 (1%)

Query: 8   QSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHA 67
           +S VHP Y+ +   ND+ LIK+         +  + LP       G    ++GWG T+ +
Sbjct: 69  KSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGNTKSS 127

Query: 68  SSLSSAIPTYVSI 80
            +    +   +  
Sbjct: 128 GTSYPDVLKCLKA 140

>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ... Length = 223

 Score = 57.5 bits (140), Expect = 3e-11
 Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 77  YVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
             +++ND+ LIK+         +  + LP       G    ++GWG T+ +G
Sbjct: 78  SNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGNTKSSG 128

>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2 Length = 228

 Score = 74.5 bits (184), Expect = 1e-17
 Identities = 12/74 (16%), Positives = 30/74 (40%), Gaps = 1/74 (1%)

Query: 7   RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH 66
                H +++   +  D+A++++   + F+ ++ P  LP       G    ++GWG T  
Sbjct: 72  EVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPASLPTAPPA-TGTKCLISGWGNTAS 130

Query: 67  ASSLSSAIPTYVSI 80
           + +        +  
Sbjct: 131 SGADYPDELQCLDA 144

>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2 Length = 228

 Score = 58.3 bits (142), Expect = 2e-11
 Identities = 12/56 (21%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 75  PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
             +       D+A++++   + F+ ++ P  LP       G    ++GWG T  +G
Sbjct: 78  NRFTKETYDFDIAVLRLKTPITFRMNVAPASLPTAPPA-TGTKCLISGWGNTASSG 132

>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A Length = 625

 Score = 76.4 bits (188), Expect = 1e-17
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
            +H QY  ++   D+AL+K++  V +     P+CLP +  +  +     V GWG  +   
Sbjct: 467 IIHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRD 526

Query: 69  SLSS 72
            + +
Sbjct: 527 KIQN 530

>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A Length = 625

 Score = 61.8 bits (150), Expect = 2e-12
 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 75  PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH 129
             Y       D+AL+K++  V +     P+CLP +  +  +     V GWG  +    
Sbjct: 470 DQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDK 527

>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ... Length = 254

 Score = 74.6 bits (184), Expect = 2e-17
 Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 4/67 (5%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGWGRTR 65
            +   Y P    +D+AL+++ + VV   H++P+CLP++T         + + V+GWG+  
Sbjct: 77  IIPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLL 136

Query: 66  HASSLSS 72
              + + 
Sbjct: 137 DRGATAL 143

>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ... Length = 254

 Score = 61.9 bits (151), Expect = 1e-12
 Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 6/60 (10%)

Query: 75  PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGWGRTRHAG 128
            TYV    ++D+AL+++ + VV   H++P+CLP++T         + + V+GWG+    G
Sbjct: 80  STYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRG 139

>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens} Length = 232

 Score = 74.1 bits (183), Expect = 2e-17
 Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
            VH +Y       D++L ++   V +   +  VCLPD + +   G    V G+G  ++  
Sbjct: 73  IVHEKYKHPSHDYDISLAELSSPVPYTNAVHRVCLPDASYEFQPGDVMFVTGFGALKNDG 132

Query: 69  SLSS 72
              +
Sbjct: 133 YSQN 136

>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens} Length = 232

 Score = 61.0 bits (149), Expect = 2e-12
 Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 77  YVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH 129
           + S   D++L ++   V +   +  VCLPD + +   G    V G+G  ++ G+
Sbjct: 80  HPSHDYDISLAELSSPVPYTNAVHRVCLPDASYEFQPGDVMFVTGFGALKNDGY 133

>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2 Length = 237

 Score = 74.2 bits (183), Expect = 2e-17
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS 69
            +H  +  +   ND++L+K+   + F  ++ P+ LP+Q          V GWG T    +
Sbjct: 83  ILHENFDYNLLDNDISLLKLSGSLTFNDNVAPIALPEQGHT-ATGDVIVTGWGTTSEGGN 141

Query: 70  LSS 72
              
Sbjct: 142 TPD 144

>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2 Length = 237

 Score = 60.3 bits (147), Expect = 3e-12
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 77  YVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
           Y  + ND++L+K+   + F  ++ P+ LP+Q          V GWG T   G
Sbjct: 90  YNLLDNDISLLKLSGSLTFNDNVAPIALPEQGHT-ATGDVIVTGWGTTSEGG 140

>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A* Length = 290

 Score = 75.1 bits (185), Expect = 2e-17
 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV--GKSATVAGWGRTRHA 67
            +H +YS S   ND+AL+KI   V     I P CLP          ++  VAGWG  +  
Sbjct: 88  IIHEKYSASSEANDIALMKITPPVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQEN 147

Query: 68  SSLSSAI 74
           +  +S +
Sbjct: 148 ARRTSPM 154

>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A* Length = 290

 Score = 60.1 bits (146), Expect = 5e-12
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 4/58 (6%)

Query: 75  PTYVSIS--NDVALIKIDKDVVFKQHIIPVCLPDQTVKLV--GKSATVAGWGRTRHAG 128
             Y + S  ND+AL+KI   V     I P CLP          ++  VAGWG  +   
Sbjct: 91  EKYSASSEANDIALMKITPPVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENA 148

>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ... Length = 238

 Score = 74.2 bits (183), Expect = 2e-17
 Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
            +H QY  ++   D+AL+K++  V +     P+ LP +  +  +     V GWG  +   
Sbjct: 80  IIHDQYKMAESGYDIALLKLETTVNYTDSQRPISLPSKGERNVIYTDCWVTGWGYRKLRD 139

Query: 69  SLSS 72
            + +
Sbjct: 140 KIQN 143

>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ... Length = 238

 Score = 60.3 bits (147), Expect = 3e-12
 Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 3/58 (5%)

Query: 75  PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH 129
             Y       D+AL+K++  V +     P+ LP +  +  +     V GWG  +    
Sbjct: 83  DQYKMAESGYDIALLKLETTVNYTDSQRPISLPSKGERNVIYTDCWVTGWGYRKLRDK 140

>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A* Length = 245

 Score = 74.2 bits (183), Expect = 2e-17
 Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
            VHPQ+       D+AL+++++ V     +  V LP  +     G    V GWG   +  
Sbjct: 78  IVHPQFYIIQTGADIALLELEEPVNISSRVHTVMLPPASETFPPGMPCWVTGWGDVDNDE 137

Query: 69  SLSSA 73
            L   
Sbjct: 138 PLPPP 142

>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A* Length = 245

 Score = 59.2 bits (144), Expect = 9e-12
 Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 3/57 (5%)

Query: 75  PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
           P +       D+AL+++++ V     +  V LP  +     G    V GWG   +  
Sbjct: 81  PQFYIIQTGADIALLELEEPVNISSRVHTVMLPPASETFPPGMPCWVTGWGDVDNDE 137

>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2 Length = 242

 Score = 74.2 bits (183), Expect = 2e-17
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 4/67 (5%)

Query: 7   RQSFVHPQYSPSD---FRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWG 62
           R+  VHP Y   +   F  D+AL++++  V    +++P+CLPD      +G    V+G+G
Sbjct: 75  RRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFG 134

Query: 63  RTRHASS 69
                 +
Sbjct: 135 VMEEKIA 141

>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2 Length = 242

 Score = 62.3 bits (152), Expect = 7e-13
 Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH 126
           +   D+AL++++  V    +++P+CLPD      +G    V+G+G    
Sbjct: 90  NFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEE 138

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 Length = 399

 Score = 75.2 bits (185), Expect = 3e-17
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)

Query: 10  FVHPQYSPSD---FRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 65
            VHP Y   +   F  D+AL++++  V    +++P+CLPD      +G    V+G+G   
Sbjct: 235 SVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVME 294

Query: 66  HASS 69
              +
Sbjct: 295 EKIA 298

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 Length = 399

 Score = 62.5 bits (152), Expect = 1e-12
 Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 125
           +   D+AL++++  V    +++P+CLPD      +G    V+G+G   
Sbjct: 247 NFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVME 294

>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A* Length = 231

 Score = 73.3 bits (181), Expect = 4e-17
 Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 1/69 (1%)

Query: 7   RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH 66
            + F     + + +  D+ LI++++ V    HI P+ LP      VG    + GWG    
Sbjct: 69  EKYFCLNTRNDTIWDKDIMLIRLNRPVRNSAHIAPLSLPSNPPS-VGSVCRIMGWGTITS 127

Query: 67  ASSLSSAIP 75
            ++    +P
Sbjct: 128 PNATLPDVP 136

>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A* Length = 231

 Score = 57.9 bits (141), Expect = 2e-11
 Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 1/52 (1%)

Query: 77  YVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
                 D+ LI++++ V    HI P+ LP      VG    + GWG      
Sbjct: 79  DTIWDKDIMLIRLNRPVRNSAHIAPLSLPSNPPS-VGSVCRIMGWGTITSPN 129

>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H* Length = 250

 Score = 73.4 bits (181), Expect = 4e-17
 Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 5/77 (6%)

Query: 7   RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-----VGKSATVAGW 61
           ++ FVHP YS S   ND+AL+ + +     Q I+P+CLPD  +        G+   V GW
Sbjct: 72  KEVFVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQETLVTGW 131

Query: 62  GRTRHASSLSSAIPTYV 78
           G        +    T+V
Sbjct: 132 GYHSSREKEAKRNRTFV 148

>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H* Length = 250

 Score = 59.6 bits (145), Expect = 6e-12
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 7/62 (11%)

Query: 75  PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-----VGKSATVAGWGRTRHA 127
           P Y      ND+AL+ + +     Q I+P+CLPD  +        G+   V GWG     
Sbjct: 78  PNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQETLVTGWGYHSSR 137

Query: 128 GH 129
             
Sbjct: 138 EK 139

>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A* Length = 223

 Score = 73.0 bits (180), Expect = 5e-17
 Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 7   RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH 66
            ++ +HP Y  +    D+ L+++ +     + I P+ L          S  + GWG+T  
Sbjct: 69  VRAVIHPDYDAASHDQDIMLLRLARPAKLSELIQPLPLERDCSA-NTTSCHILGWGKTAD 127

>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A* Length = 223

 Score = 56.0 bits (136), Expect = 1e-10
 Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 1/48 (2%)

Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH 126
           S   D+ L+++ +     + I P+ L          S  + GWG+T  
Sbjct: 81  SHDQDIMLLRLARPAKLSELIQPLPLERDCSA-NTTSCHILGWGKTAD 127

>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A* Length = 329

 Score = 74.4 bits (183), Expect = 5e-17
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 4/67 (5%)

Query: 7   RQSFVHPQYSPSD---FRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWG 62
           R+  VHP Y   +   F  D+AL++++  V    +++P+CLPD      +G    V+G+G
Sbjct: 164 RRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFG 223

Query: 63  RTRHASS 69
                 +
Sbjct: 224 VMEEKIA 230

>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A* Length = 329

 Score = 62.1 bits (151), Expect = 1e-12
 Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 125
           +   D+AL++++  V    +++P+CLPD      +G    V+G+G   
Sbjct: 179 NFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVME 226

>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2 Length = 251

 Score = 73.0 bits (180), Expect = 6e-17
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
           FVH +++    RND+ALIK+ + V     I   CLP +   L       V GWGR     
Sbjct: 92  FVHEKWNSFLVRNDIALIKLAETVELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTNG 151

Query: 69  SLSS 72
            +++
Sbjct: 152 PIAA 155

>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2 Length = 251

 Score = 58.4 bits (142), Expect = 2e-11
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
            + ND+ALIK+ + V     I   CLP +   L       V GWGR    G
Sbjct: 101 LVRNDIALIKLAETVELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTNG 151

>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_B Length = 251

 Score = 73.1 bits (180), Expect = 6e-17
 Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS 69
            +HPQY P+ F NDVAL+++ +  V    ++P+CLP+   +  G    V+GWG+      
Sbjct: 91  TLHPQYDPNTFENDVALVELLESPVLNAFVMPICLPEGPQQ-EGAMVIVSGWGKQFLQRF 149

>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_B Length = 251

 Score = 58.8 bits (143), Expect = 1e-11
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 3/53 (5%)

Query: 75  PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTR 125
           P Y      NDVAL+++ +  V    ++P+CLP+   +  G    V+GWG+  
Sbjct: 94  PQYDPNTFENDVALVELLESPVLNAFVMPICLPEGPQQ-EGAMVIVSGWGKQF 145

>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A Length = 222

 Score = 72.5 bits (179), Expect = 7e-17
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 7   RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH 66
            +   HP YS  +  ND+ LIK+ K      ++ PV LP       G   TV+GWG T  
Sbjct: 68  SRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSCAP-AGTMCTVSGWGNTMS 126

Query: 67  ASSLSS 72
           +++ S+
Sbjct: 127 STADSN 132

>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A Length = 222

 Score = 56.4 bits (137), Expect = 7e-11
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 77  YVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
             +I ND+ LIK+ K      ++ PV LP       G   TV+GWG T  + 
Sbjct: 78  SYNIDNDIMLIKLSKPATLNTYVQPVALPTSCAP-AGTMCTVSGWGNTMSST 128

>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ... Length = 241

 Score = 72.6 bits (179), Expect = 7e-17
 Identities = 15/70 (21%), Positives = 35/70 (50%), Gaps = 4/70 (5%)

Query: 7   RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGWG 62
                H +++   +  D+A++++   + F+ ++ P CLP++       +  K+  V+G+G
Sbjct: 72  EVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFG 131

Query: 63  RTRHASSLSS 72
           RT      S+
Sbjct: 132 RTHEKGEQST 141

>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ... Length = 241

 Score = 61.1 bits (149), Expect = 2e-12
 Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 6/60 (10%)

Query: 75  PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGWGRTRHAG 128
             +       D+A++++   + F+ ++ P CLP++       +  K+  V+G+GRT   G
Sbjct: 78  NRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKG 137

>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A Length = 240

 Score = 72.6 bits (179), Expect = 7e-17
 Identities = 14/66 (21%), Positives = 26/66 (39%)

Query: 7   RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH 66
           ++     + +     ND+ L+K+       +H+  + +  +T    G    V GWG T  
Sbjct: 76  KKFIPFSRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRSKTSLRSGTKCKVTGWGATDP 135

Query: 67  ASSLSS 72
            S   S
Sbjct: 136 DSLRPS 141

>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A Length = 240

 Score = 56.0 bits (136), Expect = 1e-10
 Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 2/56 (3%)

Query: 75  PTY--VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
                   SND+ L+K+       +H+  + +  +T    G    V GWG T    
Sbjct: 82  SRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDS 137

>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ... Length = 289

 Score = 73.2 bits (180), Expect = 8e-17
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 5/75 (6%)

Query: 7   RQSFVHPQYSPSD-FRNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGW 61
            + ++HP+Y+  +    D+AL+K+ K V F  +I PVCLPD+         G    V GW
Sbjct: 112 EKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGW 171

Query: 62  GRTRHASSLSSAIPT 76
           G  +   + +     
Sbjct: 172 GNLKETWTANVGKGQ 186

>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ... Length = 289

 Score = 62.0 bits (151), Expect = 1e-12
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 7/61 (11%)

Query: 75  PTY---VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGWGRTRHA 127
           P Y    ++  D+AL+K+ K V F  +I PVCLPD+         G    V GWG  +  
Sbjct: 118 PRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKET 177

Query: 128 G 128
            
Sbjct: 178 W 178

>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2 Length = 241

 Score = 72.7 bits (179), Expect = 8e-17
 Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 10  FVHPQYSPS--DFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH 66
            +H  Y      + ND+A++ +   +    +I    LP        G +  ++GWGRT  
Sbjct: 78  TMHENYGAGTASYSNDIAILHLATSISLGGNIQAAVLPANNNNDYAGTTCVISGWGRTDG 137

Query: 67  ASSLSS 72
            ++L  
Sbjct: 138 TNNLPD 143

>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2 Length = 241

 Score = 60.0 bits (146), Expect = 4e-12
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 75  PTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
               S SND+A++ +   +    +I    LP        G +  ++GWGRT    
Sbjct: 85  AGTASYSNDIAILHLATSISLGGNIQAAVLPANNNNDYAGTTCVISGWGRTDGTN 139

>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens} Length = 424

 Score = 73.7 bits (181), Expect = 1e-16
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 5/75 (6%)

Query: 7   RQSFVHPQYSPSD-FRNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGW 61
            + ++HP+Y+  +    D+AL+K+ K V F  +I PVCLPD+         G    V GW
Sbjct: 247 EKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGW 306

Query: 62  GRTRHASSLSSAIPT 76
           G  +   + +     
Sbjct: 307 GNLKETWTANVGKGQ 321

>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens} Length = 424

 Score = 62.6 bits (152), Expect = 9e-13
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 7/61 (11%)

Query: 75  PTY---VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGWGRTRHA 127
           P Y    ++  D+AL+K+ K V F  +I PVCLPD+         G    V GWG  +  
Sbjct: 253 PRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKET 312

Query: 128 G 128
            
Sbjct: 313 W 313

>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ... Length = 259

 Score = 72.3 bits (178), Expect = 1e-16
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 5/75 (6%)

Query: 7   RQSFVHPQYSPSD-FRNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGW 61
            + ++HP+Y+  +    D+AL+K+ K V F  +I PVCLPD+         G    V GW
Sbjct: 82  EKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGW 141

Query: 62  GRTRHASSLSSAIPT 76
           G  +   + +     
Sbjct: 142 GNLKETWTANVGKGQ 156

>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ... Length = 259

 Score = 61.6 bits (150), Expect = 1e-12
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 7/61 (11%)

Query: 75  PTY---VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGWGRTRHA 127
           P Y    ++  D+AL+K+ K V F  +I PVCLPD+         G    V GWG  +  
Sbjct: 88  PRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKET 147

Query: 128 G 128
            
Sbjct: 148 W 148

>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A* Length = 225

 Score = 71.8 bits (177), Expect = 1e-16
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 1/67 (1%)

Query: 7   RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 65
             S     Y P    ND+ L+++D++      +  + LP Q   +  G    VAGWG  R
Sbjct: 73  ISSMSENGYDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQR 132

Query: 66  HASSLSS 72
               LS 
Sbjct: 133 SGGRLSR 139

>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A* Length = 225

 Score = 53.7 bits (130), Expect = 6e-10
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
              ND+ L+++D++      +  + LP Q   +  G    VAGWG  R  G
Sbjct: 85  QNLNDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGG 135

>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A* Length = 234

 Score = 71.8 bits (177), Expect = 2e-16
 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 2   FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGW 61
            ++   + F      P+    D+ LI++ + V +  HI PV LP ++   VG    + GW
Sbjct: 67  IRVPRGKYFCLNTKFPNGLDKDIMLIRLRRPVTYSTHIAPVSLPSRSRG-VGSRCRIMGW 125

Query: 62  GRTRHASS 69
           G+    + 
Sbjct: 126 GKISTTTY 133

>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A* Length = 234

 Score = 56.4 bits (137), Expect = 8e-11
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRT 124
            +  D+ LI++ + V +  HI PV LP ++   VG    + GWG+ 
Sbjct: 84  GLDKDIMLIRLRRPVTYSTHIAPVSLPSRSRG-VGSRCRIMGWGKI 128

>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens} Length = 565

 Score = 73.4 bits (180), Expect = 2e-16
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 5/68 (7%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVF----KQHIIPVCLPDQTVKL-VGKSATVAGWGRT 64
             H  Y+   ++ND+ALI++ KD           IP C+P          +  V+GWGR 
Sbjct: 398 IFHENYNAGTYQNDIALIEMKKDGNKKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGRE 457

Query: 65  RHASSLSS 72
           +    + S
Sbjct: 458 KDNERVFS 465

>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens} Length = 565

 Score = 57.2 bits (138), Expect = 8e-11
 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 5/55 (9%)

Query: 79  SISNDVALIKIDKDVVF----KQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
           +  ND+ALI++ KD           IP C+P          +  V+GWGR +   
Sbjct: 407 TYQNDIALIEMKKDGNKKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDNE 461

>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A* Length = 261

 Score = 71.9 bits (177), Expect = 2e-16
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
             HP Y     + D+AL+++ + + F ++I P+ LP        G   TV GWG    + 
Sbjct: 77  IPHPSYLQEGSQGDIALLQLSRPITFSRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSV 136

Query: 69  SLSSA 73
           SL + 
Sbjct: 137 SLLTP 141

>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A* Length = 261

 Score = 58.1 bits (141), Expect = 2e-11
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 3/58 (5%)

Query: 75  PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH 129
           P+Y+      D+AL+++ + + F ++I P+ LP        G   TV GWG    +  
Sbjct: 80  PSYLQEGSQGDIALLQLSRPITFSRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVS 137

>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ... Length = 245

 Score = 71.8 bits (177), Expect = 2e-16
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
           F + +Y+     ND+ L+K+     F Q +  VCLP  +     G +    GWG TR+ +
Sbjct: 89  FKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYTN 148

Query: 69  SLSSAI 74
           + +   
Sbjct: 149 ANTPDR 154

>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ... Length = 245

 Score = 58.4 bits (142), Expect = 2e-11
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)

Query: 75  PTY--VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
             Y  ++I+ND+ L+K+     F Q +  VCLP  +     G +    GWG TR+  
Sbjct: 92  SKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYTN 148

>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A Length = 228

 Score = 71.4 bits (176), Expect = 2e-16
 Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 1/66 (1%)

Query: 7   RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 65
            ++  HP   P    +D+ L+++ +       + P+        +  G    VAGWG   
Sbjct: 73  LRAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVN 132

Query: 66  HASSLS 71
           HA    
Sbjct: 133 HAGRRP 138

>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A Length = 228

 Score = 54.9 bits (133), Expect = 3e-10
 Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH 129
           +I +D+ L+++ +       + P+        +  G    VAGWG   HAG 
Sbjct: 85  TIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGR 136

>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A* Length = 223

 Score = 71.0 bits (175), Expect = 2e-16
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 7   RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH 66
             S  HP+Y+     ND+ LIK+D+ V     I  + +  Q     G S  V+GWG   +
Sbjct: 70  SLSVRHPEYNRPLLANDLMLIKLDESVSESDTIRSISIASQCPT-AGNSCLVSGWGLLAN 128

>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A* Length = 223

 Score = 55.6 bits (135), Expect = 1e-10
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 3/54 (5%)

Query: 75  PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH 126
           P Y    ++ND+ LIK+D+ V     I  + +  Q     G S  V+GWG   +
Sbjct: 76  PEYNRPLLANDLMLIKLDESVSESDTIRSISIASQCPT-AGNSCLVSGWGLLAN 128

>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A* Length = 252

 Score = 71.6 bits (176), Expect = 2e-16
 Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKD----VVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRT 64
            VH ++    + ND+AL+++  D          +  VCLP   ++L       ++G+G+ 
Sbjct: 83  IVHKEFDDDTYDNDIALLQLKSDSSRCAQESSVVRTVCLPPADLQLPDWTECELSGYGKH 142

Query: 65  RHASSLSSAI 74
              S   S  
Sbjct: 143 EALSPFYSER 152

>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A* Length = 252

 Score = 55.8 bits (135), Expect = 2e-10
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 5/55 (9%)

Query: 79  SISNDVALIKIDKD----VVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
           +  ND+AL+++  D          +  VCLP   ++L       ++G+G+     
Sbjct: 92  TYDNDIALLQLKSDSSRCAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALS 146

>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A* Length = 224

 Score = 71.0 bits (175), Expect = 3e-16
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 3/66 (4%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
            VHP YS ++  ND+A++K+   +    +I    L         G SATVAGWG T    
Sbjct: 73  RVHPSYSGNN--NDLAILKLSTSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSEGG 130

Query: 69  SLSSAI 74
           S +   
Sbjct: 131 SSTPVN 136

>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A* Length = 224

 Score = 62.2 bits (152), Expect = 5e-13
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 75  PTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
           P+Y   +ND+A++K+   +    +I    L         G SATVAGWG T   G
Sbjct: 76  PSYSGNNNDLAILKLSTSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSEGG 130

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A Length = 403

 Score = 72.1 bits (177), Expect = 4e-16
 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 4/60 (6%)

Query: 10  FVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV---GKSATVAGWGRTR 65
           F+H  Y+  + F ND+ALIK++  VV   +I P+CLP +  +         T +GWG T+
Sbjct: 235 FIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQ 294

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A Length = 403

 Score = 59.4 bits (144), Expect = 1e-11
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 6/57 (10%)

Query: 75  PTY---VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV---GKSATVAGWGRTR 125
             Y       ND+ALIK++  VV   +I P+CLP +  +         T +GWG T+
Sbjct: 238 EGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQ 294

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 71.3 bits (175), Expect = 6e-16
 Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 4/67 (5%)

Query: 7   RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGWG 62
               VH +Y      ND++L++++  +      +PVC P++       +      ++GW 
Sbjct: 162 THVHVHMRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWA 221

Query: 63  RTRHASS 69
           R      
Sbjct: 222 RNGTDLG 228

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 56.6 bits (137), Expect = 1e-10
 Identities = 11/57 (19%), Positives = 25/57 (43%), Gaps = 6/57 (10%)

Query: 75  PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGWGRTR 125
             Y +    ND++L++++  +      +PVC P++       +      ++GW R  
Sbjct: 168 MRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNG 224

>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis} Length = 235

 Score = 69.9 bits (172), Expect = 8e-16
 Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 2/69 (2%)

Query: 8   QSFVHPQYSPSDFRNDVALIKIDKDVVFKQHII-PVCLPDQTVKL-VGKSATVAGWGRTR 65
           +     +Y P   +N+ A+I+ +  +         + LP          S  V+GWG T 
Sbjct: 70  KKIYIVRYHPLTMQNNYAVIETEMPIKLDDKTTKKIELPSLLYDPEPDTSVLVSGWGSTN 129

Query: 66  HASSLSSAI 74
             S   S  
Sbjct: 130 FKSLEYSGD 138

>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis} Length = 235

 Score = 55.3 bits (134), Expect = 2e-10
 Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 4/59 (6%)

Query: 74  IPTYVS--ISNDVALIKIDKDVVFKQHII-PVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
           I  Y    + N+ A+I+ +  +         + LP          S  V+GWG T    
Sbjct: 74  IVRYHPLTMQNNYAVIETEMPIKLDDKTTKKIELPSLLYDPEPDTSVLVSGWGSTNFKS 132

>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} Length = 242

 Score = 70.0 bits (172), Expect = 9e-16
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)

Query: 7   RQSFVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV---GKSATVAGWG 62
              F+H  Y+  + F ND+ALIK++  VV   +I P+CLP +  +         T +GWG
Sbjct: 71  EAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWG 130

Query: 63  RTRH 66
            T+ 
Sbjct: 131 LTQR 134

>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} Length = 242

 Score = 58.8 bits (143), Expect = 1e-11
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 6/58 (10%)

Query: 75  PTY---VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV---GKSATVAGWGRTRH 126
             Y       ND+ALIK++  VV   +I P+CLP +  +         T +GWG T+ 
Sbjct: 77  EGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQR 134

>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A* Length = 218

 Score = 69.1 bits (170), Expect = 1e-15
 Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 1/66 (1%)

Query: 8   QSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH 66
           Q      Y P +  ND+ +++++       ++    LP Q  +L  G      GWG    
Sbjct: 73  QRIFENGYDPVNLLNDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGR 132

Query: 67  ASSLSS 72
              ++S
Sbjct: 133 NRGIAS 138

>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A* Length = 218

 Score = 54.1 bits (131), Expect = 5e-10
 Identities = 10/51 (19%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
           ++ ND+ +++++       ++    LP Q  +L  G      GWG      
Sbjct: 84  NLLNDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNR 134

>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A Length = 230

 Score = 69.5 bits (171), Expect = 1e-15
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%)

Query: 2   FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLP---DQTVKLVGKSATV 58
             +N+ +   H  ++P  + NDVALIKI   V +  +I P+ LP   +   K     ATV
Sbjct: 67  AVVNSERIISHSMFNPDTYLNDVALIKIPH-VEYTDNIQPIRLPSGEELNNKFENIWATV 125

Query: 59  AGWGRTRHASSL 70
           +GWG++   + +
Sbjct: 126 SGWGQSNTDTVI 137

>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A Length = 230

 Score = 52.6 bits (127), Expect = 2e-09
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 6/55 (10%)

Query: 75  PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLP---DQTVKLVGKSATVAGWGRT 124
             +      NDVALIKI   V +  +I P+ LP   +   K     ATV+GWG++
Sbjct: 78  SMFNPDTYLNDVALIKIPH-VEYTDNIQPIRLPSGEELNNKFENIWATVSGWGQS 131

>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A Length = 234

 Score = 69.1 bits (170), Expect = 1e-15
 Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 7   RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 65
           ++ F +P Y P+    D+ L+++ +     +++  + LP +   +  G    VAGWGRT 
Sbjct: 70  KKEFPYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTH 129

Query: 66  HASSLSS 72
           +++S S 
Sbjct: 130 NSASWSD 136

>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A Length = 234

 Score = 51.8 bits (125), Expect = 4e-09
 Identities = 12/51 (23%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
           +   D+ L+++ +     +++  + LP +   +  G    VAGWGRT ++ 
Sbjct: 82  TREGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHNSA 132

>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2 Length = 225

 Score = 69.1 bits (170), Expect = 1e-15
 Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 4/78 (5%)

Query: 7   RQSFVHPQYS---PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR 63
            QS  HP Y+   P D  +D+ LI++         + PV L +   K VG+   ++GWG 
Sbjct: 69  AQSIQHPCYNNSNPEDHSHDIMLIRLQNSANLGDKVKPVQLANLCPK-VGQKCIISGWGT 127

Query: 64  TRHASSLSSAIPTYVSIS 81
                           + 
Sbjct: 128 VTSPQENFPNTLNCAEVK 145

>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2 Length = 225

 Score = 57.6 bits (140), Expect = 2e-11
 Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 75  PTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
                 S+D+ LI++         + PV L +   K VG+   ++GWG      
Sbjct: 80  SNPEDHSHDIMLIRLQNSANLGDKVKPVQLANLCPK-VGQKCIISGWGTVTSPQ 132

>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A Length = 227

 Score = 69.1 bits (170), Expect = 2e-15
 Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 7   RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 65
           ++   HP Y+P +F ND+ L+++++     + + P+ LP    ++  G++ +VAGWG+T 
Sbjct: 72  KRPIPHPAYNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTA 131

Query: 66  HASSLS 71
                S
Sbjct: 132 PLGKHS 137

>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A Length = 227

 Score = 51.0 bits (123), Expect = 6e-09
 Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
           + SND+ L+++++     + + P+ LP    ++  G++ +VAGWG+T   G
Sbjct: 84  NFSNDIMLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLG 134

>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C Length = 240

 Score = 69.2 bits (170), Expect = 2e-15
 Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 3/74 (4%)

Query: 2   FKLNTRQSFVHPQYSPSDFR--NDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATV 58
             +N    FVHP ++ +     ND+AL+K+ +       +    LP     L       +
Sbjct: 70  IPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQLGDKVQLANLPPAGDILPNEAPCYI 129

Query: 59  AGWGRTRHASSLSS 72
           +GWGR      L  
Sbjct: 130 SGWGRLYTGGPLPD 143

>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C Length = 240

 Score = 58.4 bits (142), Expect = 1e-11
 Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 75  PTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
              V+  ND+AL+K+ +       +    LP     L       ++GWGR    G
Sbjct: 85  SNCVACGNDIALVKLSRSAQLGDKVQLANLPPAGDILPNEAPCYISGWGRLYTGG 139

>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} Length = 228

 Score = 68.8 bits (169), Expect = 2e-15
 Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 2/65 (3%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVF-KQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHA 67
                Y      ND+A++++ + +        P  LPD   +   G    V+G+G  +  
Sbjct: 76  VYLSFYRQETMENDIAILELSRPLKLDGLKSKPAKLPDIEFRPKTGSDVLVSGYGDGQTM 135

Query: 68  SSLSS 72
                
Sbjct: 136 DPKDH 140

>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} Length = 228

 Score = 55.7 bits (135), Expect = 2e-10
 Identities = 11/52 (21%), Positives = 24/52 (46%), Gaps = 2/52 (3%)

Query: 79  SISNDVALIKIDKDVVF-KQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
           ++ ND+A++++ + +        P  LPD   +   G    V+G+G  +   
Sbjct: 85  TMENDIAILELSRPLKLDGLKSKPAKLPDIEFRPKTGSDVLVSGYGDGQTMD 136

>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C* Length = 235

 Score = 68.8 bits (169), Expect = 2e-15
 Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 5/68 (7%)

Query: 10  FVHPQYSPSD--FRNDVALIKIDKDVVFKQHIIPVCLPDQTVK---LVGKSATVAGWGRT 64
             H  ++ +   + +D+AL+++D+ +V   ++ P+C+ D+      L   S  V+GWGR 
Sbjct: 74  IPHHNFNAAINTYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRV 133

Query: 65  RHASSLSS 72
            H    + 
Sbjct: 134 FHKGRSAL 141

>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C* Length = 235

 Score = 60.7 bits (148), Expect = 2e-12
 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 75  PTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVK---LVGKSATVAGWGRTRHAG 128
               + ++D+AL+++D+ +V   ++ P+C+ D+      L   S  V+GWGR  H G
Sbjct: 81  AAINTYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKG 137

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens} Length = 283

 Score = 69.3 bits (170), Expect = 2e-15
 Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 4/67 (5%)

Query: 7   RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQT----VKLVGKSATVAGWG 62
               VH +Y      ND++L++++  +      +PVC P++     + +      ++GW 
Sbjct: 121 THVHVHMRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWA 180

Query: 63  RTRHASS 69
           R      
Sbjct: 181 RNGTDLG 187

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens} Length = 283

 Score = 55.9 bits (135), Expect = 2e-10
 Identities = 11/57 (19%), Positives = 26/57 (45%), Gaps = 6/57 (10%)

Query: 75  PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQT----VKLVGKSATVAGWGRTR 125
             Y +    ND++L++++  +      +PVC P++     + +      ++GW R  
Sbjct: 127 MRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNG 183

>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A* Length = 372

 Score = 70.2 bits (172), Expect = 2e-15
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 7/70 (10%)

Query: 10  FVHPQYSPSD------FRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV-GKSATVAGWG 62
             H  Y P          ND+AL+ +   +   ++I PVCLP     LV GK  TV GWG
Sbjct: 193 VYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWG 252

Query: 63  RTRHASSLSS 72
            T++    + 
Sbjct: 253 NTQYYGQQAG 262

>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A* Length = 372

 Score = 63.2 bits (154), Expect = 5e-13
 Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 66  HASSLSSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV-GKSATVAGWGRT 124
           H   L    P     SND+AL+ +   +   ++I PVCLP     LV GK  TV GWG T
Sbjct: 195 HGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNT 254

Query: 125 RHAG 128
           ++ G
Sbjct: 255 QYYG 258

>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 Length = 333

 Score = 69.4 bits (170), Expect = 3e-15
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 10/70 (14%)

Query: 7   RQSFVHPQYS-------PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV---GKSA 56
              F+HP +         ++F ND+AL+++   V     + P+CLP  +       G   
Sbjct: 151 EHVFIHPGWKLLAVPEGRTNFDNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLG 210

Query: 57  TVAGWGRTRH 66
            ++GWGRT  
Sbjct: 211 LISGWGRTEK 220

>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 Length = 333

 Score = 59.4 bits (144), Expect = 1e-11
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV---GKSATVAGWGRTRHAG 128
           +  ND+AL+++   V     + P+CLP  +       G    ++GWGRT    
Sbjct: 170 NFDNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRD 222

>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A Length = 226

 Score = 67.5 bits (166), Expect = 5e-15
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)

Query: 7   RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 65
            + F HP+Y+ S   +D+ L+K+ +       +  +  P Q   +  G+   VAGWGRT 
Sbjct: 73  IKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTG 132

Query: 66  HASSLS 71
                S
Sbjct: 133 VLKPGS 138

>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A Length = 226

 Score = 50.6 bits (122), Expect = 1e-08
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 3/57 (5%)

Query: 75  PTY--VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
           P Y   ++ +D+ L+K+ +       +  +  P Q   +  G+   VAGWGRT    
Sbjct: 79  PKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLK 135

>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A Length = 240

 Score = 67.6 bits (166), Expect = 5e-15
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 7   RQSFVHPQYSPSD-FRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRT 64
           + +  HP+Y P     ND+AL+++D  V   + I P+ LP +   +  G   ++AGWG T
Sbjct: 69  KAAIQHPRYKPVPALENDLALLQLDGKVKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLT 128

Query: 65  RHASSLS 71
                LS
Sbjct: 129 HQGGRLS 135

>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A Length = 240

 Score = 56.1 bits (136), Expect = 1e-10
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 77  YVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH 129
             ++ ND+AL+++D  V   + I P+ LP +   +  G   ++AGWG T   G 
Sbjct: 80  VPALENDLALLQLDGKVKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLTHQGGR 133

>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} PDB: 3g01_A Length = 227

 Score = 67.5 bits (166), Expect = 5e-15
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 7   RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 65
            ++  HP Y+P D  ND+ L+K+ ++    + + P+ LP +   +  G    VAGWG+  
Sbjct: 73  AKAIPHPDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPRRNAHVKPGDECYVAGWGKVT 132

Query: 66  HASSLS 71
                 
Sbjct: 133 PDGEFP 138

>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} PDB: 3g01_A Length = 227

 Score = 49.8 bits (120), Expect = 2e-08
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)

Query: 75  PTY--VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
           P Y     SND+ L+K+ ++    + + P+ LP +   +  G    VAGWG+    G
Sbjct: 79  PDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPRRNAHVKPGDECYVAGWGKVTPDG 135

>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 1bqy_A* Length = 234

 Score = 67.6 bits (166), Expect = 6e-15
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 2/74 (2%)

Query: 8   QSFVHP-QYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH 66
           + F+ P + +      D+ LIK+D  V   +HI+P+ LP      VG    + GWG    
Sbjct: 70  EKFICPNKKNDEVLDKDIMLIKLDSRVSNSEHIVPLSLPSSPPS-VGSVCHIMGWGSITP 128

Query: 67  ASSLSSAIPTYVSI 80
                  +P    I
Sbjct: 129 IKVTYPDVPYCAYI 142

>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 1bqy_A* Length = 234

 Score = 57.6 bits (140), Expect = 3e-11
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 77  YVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
              +  D+ LIK+D  V   +HI+P+ LP      VG    + GWG      
Sbjct: 80  DEVLDKDIMLIKLDSRVSNSEHIVPLSLPSSPPS-VGSVCHIMGWGSITPIK 130

>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A* Length = 224

 Score = 67.5 bits (166), Expect = 6e-15
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 7   RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 65
           R++  HPQY+    +ND+ L+++ + V   +++ PV LP     L  G   TVAGWGR  
Sbjct: 72  RRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVS 131

Query: 66  H 66
            
Sbjct: 132 M 132

>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A* Length = 224

 Score = 50.6 bits (122), Expect = 9e-09
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)

Query: 75  PTY--VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH 126
           P Y   +I ND+ L+++ + V   +++ PV LP     L  G   TVAGWGR   
Sbjct: 78  PQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSM 132

>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A Length = 224

 Score = 67.2 bits (165), Expect = 6e-15
 Identities = 16/63 (25%), Positives = 23/63 (36%), Gaps = 5/63 (7%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS 69
              P ++   +  D ALIK+ + +       P      T      + TVAGWG  R   S
Sbjct: 71  LQAPGFTKETYGKDWALIKLAQPINQ-----PTLKIATTTAYNQGTFTVAGWGANREGGS 125

Query: 70  LSS 72
              
Sbjct: 126 QQR 128

>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A Length = 224

 Score = 54.1 bits (131), Expect = 5e-10
 Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 7/56 (12%)

Query: 75  PTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
           P +       D ALIK+ + +       P      T      + TVAGWG  R  G
Sbjct: 74  PGFTKETYGKDWALIKLAQPINQ-----PTLKIATTTAYNQGTFTVAGWGANREGG 124

>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2 Length = 224

 Score = 67.1 bits (165), Expect = 6e-15
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 7   RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 65
            +  +H  Y+     +D+ L+K++K V     +  V LP  +  +  G     AGWG+T 
Sbjct: 73  EKQIIHESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTG 132

Query: 66  HASSLS 71
                S
Sbjct: 133 VRDPTS 138

>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2 Length = 224

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 3/57 (5%)

Query: 75  PTY--VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
            +Y  V   +D+ L+K++K V     +  V LP  +  +  G     AGWG+T    
Sbjct: 79  ESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTGVRD 135

>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2 Length = 240

 Score = 67.2 bits (165), Expect = 8e-15
 Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 12/86 (13%)

Query: 7   RQSFVHPQYSPS-----------DFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKS 55
            ++  HP ++ S           D+ ND+ L+++ K       + P+ LP +  K +G +
Sbjct: 72  SKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPK-LGST 130

Query: 56  ATVAGWGRTRHASSLSSAIPTYVSIS 81
              +GWG T             V++ 
Sbjct: 131 CLASGWGSTTPIKFKYPDDLQCVNLK 156

>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2 Length = 240

 Score = 56.5 bits (137), Expect = 8e-11
 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 71  SSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
                     SND+ L+++ K       + P+ LP +  K +G +   +GWG T    
Sbjct: 87  EHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPK-LGSTCLASGWGSTTPIK 143

>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2 Length = 227

 Score = 67.1 bits (165), Expect = 8e-15
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%)

Query: 7   RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 65
           R+   HP Y+     ND+ L+K+ +       + P+ LP    ++  G   +VAGWGR  
Sbjct: 72  RRPIPHPDYNDETLANDIMLLKLTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLG 131

Query: 66  HASSLS 71
                +
Sbjct: 132 VNMPST 137

>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2 Length = 227

 Score = 49.8 bits (120), Expect = 2e-08
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
           +++ND+ L+K+ +       + P+ LP    ++  G   +VAGWGR     
Sbjct: 84  TLANDIMLLKLTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLGVNM 134

>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2 Length = 236

 Score = 67.2 bits (165), Expect = 8e-15
 Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 3/66 (4%)

Query: 10  FVHPQYSPSDFR--NDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH 66
           F+H  ++  D     D+AL++++        +    LP     L       + GWG+T  
Sbjct: 78  FIHSGWNSDDVAGGYDIALLRLNTQASLNSAVQLAALPPSNQILPNNNPCYITGWGKTST 137

Query: 67  ASSLSS 72
              LS 
Sbjct: 138 GGPLSD 143

>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2 Length = 236

 Score = 55.7 bits (135), Expect = 2e-10
 Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 78  VSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH 129
           V+   D+AL++++        +    LP     L       + GWG+T   G 
Sbjct: 88  VAGGYDIALLRLNTQASLNSAVQLAALPPSNQILPNNNPCYITGWGKTSTGGP 140

>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ... Length = 240

 Score = 67.2 bits (165), Expect = 8e-15
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 10  FVHPQYSPSDFR--NDVALIKIDKDVVFKQHIIPVCLPDQTVKLV-GKSATVAGWGRTRH 66
            VHP ++  D     D+AL+++ + V    ++    LP     L       + GWG TR 
Sbjct: 78  VVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRT 137

Query: 67  ASSLSS 72
              L+ 
Sbjct: 138 NGQLAQ 143

>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ... Length = 240

 Score = 56.0 bits (136), Expect = 1e-10
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 75  PTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV-GKSATVAGWGRTRHAG 128
              V+   D+AL+++ + V    ++    LP     L       + GWG TR  G
Sbjct: 85  TDDVAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNG 139

>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2 Length = 241

 Score = 66.8 bits (164), Expect = 1e-14
 Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 3/66 (4%)

Query: 10  FVHPQYSPSDF--RNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH 66
            VH  ++ +     ND+AL+K+   V     I   CLP     L       V GWGR + 
Sbjct: 78  VVHQDWNSNQLSNGNDIALLKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQT 137

Query: 67  ASSLSS 72
             +   
Sbjct: 138 NGASPD 143

>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2 Length = 241

 Score = 57.6 bits (140), Expect = 3e-11
 Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 75  PTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
              +S  ND+AL+K+   V     I   CLP     L       V GWGR +  G
Sbjct: 85  SNQLSNGNDIALLKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNG 139

>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2 Length = 235

 Score = 66.5 bits (163), Expect = 2e-14
 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 12/85 (14%)

Query: 7   RQSFVHPQYSPS-----------DFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKS 55
           RQSF HP Y P            D  ND+ L+ + +       +  + LP +  K VG +
Sbjct: 67  RQSFRHPDYIPLIVTNDTEQPVHDHSNDLMLLHLSEPADITGGVKVIDLPTKEPK-VGST 125

Query: 56  ATVAGWGRTRHASSLSSAIPTYVSI 80
              +GWG T  +  + S     V+I
Sbjct: 126 CLASGWGSTNPSEMVVSHDLQCVNI 150

>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2 Length = 235

 Score = 55.7 bits (135), Expect = 1e-10
 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 81  SNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
           SND+ L+ + +       +  + LP +  K VG +   +GWG T  + 
Sbjct: 92  SNDLMLLHLSEPADITGGVKVIDLPTKEPK-VGSTCLASGWGSTNPSE 138

>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G* Length = 237

 Score = 66.1 bits (162), Expect = 2e-14
 Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 12/86 (13%)

Query: 7   RQSFVHPQYSPS-----------DFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKS 55
            +SF HP ++ S           DF +D+ L+++ K       + P+ LP +  K  G  
Sbjct: 69  SKSFPHPGFNMSLLMLQTIPPGADFSDDLMLLRLSKPADITDVVKPIALPTKEPK-PGSK 127

Query: 56  ATVAGWGRTRHASSLSSAIPTYVSIS 81
              +GWG               V I+
Sbjct: 128 CLASGWGSITPTRWQKPDDLQCVFIT 153

>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G* Length = 237

 Score = 56.4 bits (137), Expect = 8e-11
 Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 1/58 (1%)

Query: 71  SSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
              IP     S+D+ L+++ K       + P+ LP +  K  G     +GWG      
Sbjct: 84  LQTIPPGADFSDDLMLLRLSKPADITDVVKPIALPTKEPK-PGSKCLASGWGSITPTR 140

>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P* Length = 237

 Score = 65.7 bits (161), Expect = 2e-14
 Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 12/86 (13%)

Query: 7   RQSFVHPQYSPS-----------DFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKS 55
             SF HP Y  S           D  +D+ L+++ +       +  + LP Q    +G +
Sbjct: 69  SHSFPHPLYDMSLLKNRFLRPGDDSSHDLMLLRLSEPAELTDAVKVMDLPTQEPA-LGTT 127

Query: 56  ATVAGWGRTRHASSLSSAIPTYVSIS 81
              +GWG       L+      V + 
Sbjct: 128 CYASGWGSIEPEEFLTPKKLQCVDLH 153

>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P* Length = 237

 Score = 54.9 bits (133), Expect = 3e-10
 Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 81  SNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
           S+D+ L+++ +       +  + LP Q    +G +   +GWG      
Sbjct: 94  SHDLMLLRLSEPAELTDAVKVMDLPTQEPA-LGTTCYASGWGSIEPEE 140

>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A Length = 283

 Score = 66.2 bits (162), Expect = 3e-14
 Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 6/74 (8%)

Query: 7   RQSFVHPQYSPSD-FRNDVALIKI----DKDVVFKQHIIPVCLPDQTVKL-VGKSATVAG 60
            +   +  YS  +   +D+ LI++    D+     Q + P+CLP+       G    +AG
Sbjct: 108 EKYIPYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAG 167

Query: 61  WGRTRHASSLSSAI 74
           WG      S  S+ 
Sbjct: 168 WGHLDENVSGYSSS 181

>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A Length = 283

 Score = 54.2 bits (131), Expect = 6e-10
 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 5/58 (8%)

Query: 76  TYVSISNDVALIKI----DKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
            +    +D+ LI++    D+     Q + P+CLP+       G    +AGWG      
Sbjct: 118 VFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENV 175

>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A* Length = 248

 Score = 65.7 bits (161), Expect = 3e-14
 Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 6/74 (8%)

Query: 7   RQSFVHPQYSPSD-FRNDVALIKI----DKDVVFKQHIIPVCLPDQTVKLV-GKSATVAG 60
            +   +  YS  +   +D+ LI++    D+     Q + P+CLP+       G    +AG
Sbjct: 73  EKYIPYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAG 132

Query: 61  WGRTRHASSLSSAI 74
           WG      S  S+ 
Sbjct: 133 WGHLDENVSGYSSS 146

>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A* Length = 248

 Score = 53.4 bits (129), Expect = 1e-09
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 5/55 (9%)

Query: 79  SISNDVALIKI----DKDVVFKQHIIPVCLPDQTVKLV-GKSATVAGWGRTRHAG 128
              +D+ LI++    D+     Q + P+CLP+       G    +AGWG      
Sbjct: 86  PSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENV 140

>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ... Length = 247

 Score = 65.4 bits (160), Expect = 5e-14
 Identities = 17/75 (22%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 7   RQSFVHPQYSPS--DFRNDVALIKIDKD----VVFKQHIIPVCLPDQTVKL-VGKSATVA 59
               +H  YS       ND+AL+KI           + I  + LP        G S  + 
Sbjct: 79  ENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTISLPSMYNDPQFGTSCEIT 138

Query: 60  GWGRTRHASSLSSAI 74
           G+G+      L    
Sbjct: 139 GFGKENSTDYLYPEQ 153

>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ... Length = 247

 Score = 52.3 bits (126), Expect = 2e-09
 Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 5/53 (9%)

Query: 81  SNDVALIKIDKD----VVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
            ND+AL+KI           + I  + LP        G S  + G+G+     
Sbjct: 95  HNDIALLKIRSKEGRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTD 147

>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2 Length = 237

 Score = 63.8 bits (156), Expect = 1e-13
 Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 12/85 (14%)

Query: 7   RQSFVHPQYSPS-----------DFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKS 55
             SF+ PQ+  S           D  +D+ L+++ +       +  + LP Q  K +G +
Sbjct: 69  SDSFLDPQFDLSLLKKKYLRPYDDISHDLMLLRLAQPARITDAVKILDLPTQEPK-LGST 127

Query: 56  ATVAGWGRTRHASSLSSAIPTYVSI 80
              +GWG     ++  S     V +
Sbjct: 128 CYTSGWGLISTFTNRGSGTLQCVEL 152

>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2 Length = 237

 Score = 54.9 bits (133), Expect = 3e-10
 Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 71  SSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
              +  Y  IS+D+ L+++ +       +  + LP Q  K +G +   +GWG      
Sbjct: 84  KKYLRPYDDISHDLMLLRLAQPARITDAVKILDLPTQEPK-LGSTCYTSGWGLISTFT 140

>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A Length = 497

 Score = 64.5 bits (157), Expect = 2e-13
 Identities = 19/98 (19%), Positives = 32/98 (32%), Gaps = 10/98 (10%)

Query: 3   KLNTRQSFVHPQYS---------PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-V 52
            L       HP Y+         P  +  DVALIK+   + + Q I P+CLP        
Sbjct: 280 DLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRA 339

Query: 53  GKSATVAGWGRTRHASSLSSAIPTYVSISNDVALIKID 90
            +        + +     +  I        +  L + +
Sbjct: 340 LRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKE 377

>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A Length = 497

 Score = 54.1 bits (130), Expect = 8e-10
 Identities = 12/60 (20%), Positives = 20/60 (33%), Gaps = 1/60 (1%)

Query: 68  SSLSSAIPTYVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH 126
            +             DVALIK+   + + Q I P+CLP         +        + + 
Sbjct: 294 INGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKE 353

>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A Length = 247

 Score = 63.4 bits (155), Expect = 3e-13
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 7/61 (11%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
           F+ P         D+AL+K+    V    +IP CLP     +       + GWG T+   
Sbjct: 95  FLEPTR------KDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTF 148

Query: 69  S 69
            
Sbjct: 149 G 149

>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A Length = 247

 Score = 56.9 bits (138), Expect = 5e-11
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 82  NDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH 126
            D+AL+K+    V    +IP CLP     +       + GWG T+ 
Sbjct: 101 KDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQG 146

>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A Length = 791

 Score = 63.5 bits (154), Expect = 5e-13
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 7/57 (12%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 65
           F+ P         D+AL+K+    V    +IP CLP     +       + GWG T+
Sbjct: 639 FLEPTR------KDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQ 689

>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A Length = 791

 Score = 58.1 bits (140), Expect = 4e-11
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 82  NDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 125
            D+AL+K+    V    +IP CLP     +       + GWG T+
Sbjct: 645 KDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQ 689

>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2 Length = 221

 Score = 62.2 bits (152), Expect = 6e-13
 Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 2/67 (2%)

Query: 7   RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR 65
            Q F++  Y   +  ND+ LI++         +  V LP Q   +  G      GWGR  
Sbjct: 76  AQVFLNN-YDAENKLNDILLIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVG 134

Query: 66  HASSLSS 72
                + 
Sbjct: 135 AHDPPAQ 141

>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2 Length = 221

 Score = 50.6 bits (122), Expect = 9e-09
 Identities = 13/52 (25%), Positives = 19/52 (36%), Gaps = 1/52 (1%)

Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH 129
           +  ND+ LI++         +  V LP Q   +  G      GWGR      
Sbjct: 87  NKLNDILLIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDP 138

>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens} Length = 238

 Score = 60.7 bits (148), Expect = 2e-12
 Identities = 17/86 (19%), Positives = 34/86 (39%), Gaps = 13/86 (15%)

Query: 7   RQSFVHPQYSPS-----------DFRNDVALIKIDKDV-VFKQHIIPVCLPDQTVKLVGK 54
            +SF HP ++ S           D+ +D+ L+++ +        +  V LP +  + VG 
Sbjct: 69  SESFPHPGFNMSLLENHTRQADEDYSHDLMLLRLTEPADTITDAVKVVELPTEEPE-VGS 127

Query: 55  SATVAGWGRTRHASSLSSAIPTYVSI 80
           +   +GWG     +         V +
Sbjct: 128 TCLASGWGSIEPENFSFPDDLQCVDL 153

>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens} Length = 238

 Score = 51.4 bits (124), Expect = 5e-09
 Identities = 11/49 (22%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 81  SNDVALIKIDKDV-VFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG 128
           S+D+ L+++ +        +  V LP +  + VG +   +GWG      
Sbjct: 94  SHDLMLLRLTEPADTITDAVKVVELPTEEPE-VGSTCLASGWGSIEPEN 141

>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens} Length = 234

 Score = 60.7 bits (148), Expect = 2e-12
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 7/61 (11%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS 68
              P        + + L+K+++ V   Q +  +CLP +   +  G    +AGWG T+   
Sbjct: 78  VCGPSG------SQLVLLKLERSVTLNQRVALICLPPEWYVVPPGTKCEIAGWGETKGTG 131

Query: 69  S 69
           +
Sbjct: 132 N 132

>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens} Length = 234

 Score = 57.2 bits (139), Expect = 4e-11
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 82  NDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG 128
           + + L+K+++ V   Q +  +CLP +   +  G    +AGWG T+  G
Sbjct: 84  SQLVLLKLERSVTLNQRVALICLPPEWYVVPPGTKCEIAGWGETKGTG 131

>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A Length = 240

 Score = 59.9 bits (146), Expect = 4e-12
 Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 1/65 (1%)

Query: 6   TRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRT 64
            +Q     Q       +D+ L+K+ +  V    +  + LP+    +    S +V GWG T
Sbjct: 67  CKQVLNVSQLVYGPEGSDLVLMKLARPAVLDDFVSTIDLPNYGSTIPEKTSCSVYGWGYT 126

Query: 65  RHASS 69
              + 
Sbjct: 127 GLINY 131

>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A Length = 240

 Score = 54.5 bits (132), Expect = 3e-10
 Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 82  NDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH 129
           +D+ L+K+ +  V    +  + LP+    +    S +V GWG T    +
Sbjct: 83  SDLVLMKLARPAVLDDFVSTIDLPNYGSTIPEKTSCSVYGWGYTGLINY 131

>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B Length = 152

 Score = 57.9 bits (141), Expect = 6e-12
 Identities = 10/53 (18%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 17 PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS 69
            D+ +D+ L+++         +  + LP Q  + +G +   +GWG       
Sbjct: 3  GKDYSHDLMLLRLQSPAKITDAVKVLELPTQEPE-LGSTCEASGWGSIEPGPD 54

>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B Length = 152

 Score = 57.9 bits (141), Expect = 7e-12
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 1/54 (1%)

Query: 77  YVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAGHK 130
               S+D+ L+++         +  + LP Q  + +G +   +GWG        
Sbjct: 3   GKDYSHDLMLLRLQSPAKITDAVKVLELPTQEPE-LGSTCEASGWGSIEPGPDD 55

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F* Length = 741

 Score = 59.3 bits (143), Expect = 1e-11
 Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 10/98 (10%)

Query: 3   KLNTRQSFVHPQYS---------PSDFRNDVALIKIDKDVVFKQHIIPVCLPD-QTVKLV 52
            L       HP Y+         P  +  DVALIK+   + + Q I P+CLP  +     
Sbjct: 522 DLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRA 581

Query: 53  GKSATVAGWGRTRHASSLSSAIPTYVSISNDVALIKID 90
            +        + +     +  I        +  L + +
Sbjct: 582 LRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKE 619

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F* Length = 741

 Score = 49.3 bits (117), Expect = 4e-08
 Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 1/44 (2%)

Query: 82  NDVALIKIDKDVVFKQHIIPVCLPD-QTVKLVGKSATVAGWGRT 124
            DVALIK+   + + Q I P+CLP  +      +        + 
Sbjct: 550 YDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQ 593

>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A* Length = 509

 Score = 59.2 bits (143), Expect = 2e-11
 Identities = 15/106 (14%), Positives = 34/106 (32%), Gaps = 15/106 (14%)

Query: 3   KLNTRQSFVHPQYS---------PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV- 52
           +    ++ + P +             + +D+AL+K+ + V    H  P+CLP      + 
Sbjct: 289 EFLIEKAVISPGFDVFAKKNQGILEFYGDDIALLKLAQKVKMSTHARPICLPCTMEANLA 348

Query: 53  -----GKSATVAGWGRTRHASSLSSAIPTYVSISNDVALIKIDKDV 93
                G +            S  +  +    S  N    + ++   
Sbjct: 349 LRRPQGSTCRDHENELLNKQSVPAHFVALNGSKLNINLKMGVEWTS 394

>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A* Length = 509

 Score = 50.3 bits (120), Expect = 2e-08
 Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 6/56 (10%)

Query: 79  SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLV------GKSATVAGWGRTRHAG 128
              +D+AL+K+ + V    H  P+CLP      +      G +             
Sbjct: 314 FYGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQS 369

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	132
3mfj_A	223	Cationic trypsin; serine proteinase, hydrolase; 0.	99.84
1iau_A	227	Granzyme B; hydrolase-hydrolase inhibitor complex;	99.84
1ton_A	235	Tonin; hydrolase(serine proteinase); 1.80A {Rattus	99.84
2psx_A	227	Kallikrein-5; zinc inhibition, stratum corneum, gl	99.84
2qxi_A	224	Kallikrein-7; S1 pocket, chloromethyl ketone, alte	99.84
2bdg_A	223	Kallikrein-4; serine proteinase, S1 subsite, 70-80	99.83
1npm_A	225	Neuropsin; serine proteinase, glycoprotein; HET: N	99.83
1fxy_A	228	Coagulation factor XA-trypsin chimera; protease, c	99.83
1cgh_A	224	Cathepsin G; inflammation, specificity, serine pro	99.83
1lo6_A	223	Kallikrein 6, HK6; serine protease, human kallikre	99.83
1hj8_A	222	Trypsin I; hydrolase, radiation damage, disulphide	99.83
1ym0_A	238	Fibrinotic enzyme component B; two chains, glycosy	99.83
2f91_A	237	Hepatopancreas trypsin; trypsin, canonical inhibit	99.83
2aiq_A	231	Protein C activator; snake venom serine proteinase	99.83
1ao5_A	237	Glandular kallikrein-13; serine protease, protein	99.83
3fzz_A	227	Granzyme C; hydrolase, cytolysis, protease, serine	99.83
1sgf_A	240	7S NGF, nerve growth factor; growth factor (beta-N	99.83
2zch_P	237	Prostate-specific antigen; human PSA, kallikrein r	99.82
4i8h_A	223	Cationic trypsin, beta-trypsin; serine protease, h	99.82
1mza_A	240	Pro-granzyme K; apoptosis, serine protease, S1 fam	99.82
1eq9_A	222	Chymotrypsin; FIRE ANT, serine proteinase, hydrola	99.82
2xw9_A	228	Complement factor D; immune system, hydrolase, ser	99.82
1euf_A	227	Duodenase; serine protease, dual specificity, hydr	99.82
1spj_A	238	Kallikrein 1; serine protease, KLK1, HK1, hydrolas	99.82
1azz_A	226	Collagenase; complex (serine protease/inhibitor),	99.82
1orf_A	234	Granzyme A; hydrolase-hydrolase inhibitor complex;	99.82
1t8o_A	245	Chymotrypsin A; chymotrypsin, serine proteinase, B	99.81
1rtf_B	252	(TC)-T-PA, two chain tissue plasminogen activator;	99.81
2zgc_A	240	Granzyme M; serine protease, cytolysis, glycoprote	99.81
1gvz_A	237	Kallikrein-1E2; antigen, prostate specific antigen	99.81
4e7n_A	238	Snake-venom thrombin-like enzyme; beta-barrel, hyd	99.81
1fiw_A	290	Beta-acrosin heavy chain; anti-parallel beta-barre	99.81
3bg8_A	238	Coagulation factor XIA light chain; protease inhib	99.81
3s69_A	234	Thrombin-like enzyme defibrase; beta-barrel, serin	99.81
2f9n_A	245	Alpha I tryptase; serine proteinase, trypsin-like,	99.81
4dgj_A	235	Enteropeptidase catalytic light chain; serine prot	99.81
2olg_A	278	Pro-phenoloxidase activating enzyme-I; prophenolox	99.8
2b9l_A	394	Prophenoloxidase activating factor; CLIP domain, e	99.8
2any_A	241	Kininogenin, plasma kallikrein, light chain, fletc	99.8
2xxl_A	408	GRAM-positive specific serine protease, isoform B;	99.8
1pq7_A	224	Trypsin; ultra-high resolution, catalysis, hydrola	99.8
1bru_P	241	Elastase, PPE; serine protease, hydrolase; HET: 1N	99.8
2oq5_A	232	Transmembrane protease, serine 11E; type II trans-	99.79
1pyt_D	251	TC, PCPA-TC, chymotrypsinogen C; ternary complex (	99.79
4ag1_A	226	Chymase; hydrolase-de novo protein complex, inhibi	99.79
3rp2_A	224	RAT MAST cell protease II; serine proteinase; 1.90	99.79
3s9c_A	234	Vipera russelli proteinase RVV-V gamma; serine pro	99.79
1gvk_B	240	Elastase 1, peptide inhibitor; hydrolase, serine p	99.79
2bdy_A	289	Thrombin; thrombin, complex structure, hydrolase,	99.78
3ncl_A	241	Suppressor of tumorigenicity 14 protein; proteinas	99.78
3gyl_B	261	Prostasin; ENAC, zymogen, divalent cation, channel	99.78
1elt_A	236	Elastase; serine proteinase; 1.61A {Salmo salar} S	99.78
1fon_A	240	Procarboxypeptidase A-S6; truncated zymogen E, ser	99.78
1yph_C	131	Chymotrypsin A, chain B; serine protease, hydrolas	99.77
2z7f_E	218	Leukocyte elastase; serine protease, serine protea	99.77
3tvj_B	242	Mannan-binding lectin serine protease 2 B chain; i	99.77
3gov_B	251	MAsp-1; complement, serine protease, beta barrel,	99.77
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	99.77
1m9u_A	241	Earthworm fibrinolytic enzyme; hydrolase, serine p	99.77
1z8g_A	372	Serine protease hepsin; serine protease hepsin, pr	99.77
2r0l_A	248	Hepatocyte growth factor activator; serine proteas	99.77
1aut_C	250	Activated protein C; serine proteinase, plasma cal	99.76
4f4o_C	347	Haptoglobin; globin fold, serine protease fold, co	99.76
1yc0_A	283	Hepatocyte growth factor activator; hydrolase/inhi	99.76
3h7t_A	235	Group 3 allergen smipp-S YVT004A06; hydrolase; 2.0	99.76
2hlc_A	230	Collagenase; serine protease, hydrolase, collagen	99.76
2pka_B	152	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	99.75
2bz6_H	254	Blood coagulation factor VIIA; serine protease, en	99.75
1a7s_A	225	Heparin binding protein; serine protease homolog,	99.75
3h7o_A	228	Group 3 allergen smipp-S YV6023A04; hydrolase; 1.8	99.75
2qy0_B	242	Complement C1R subcomponent; serine protease, beta	99.75
2wph_S	235	Coagulation factor IXA heavy chain; serine proteas	99.74
3rm2_H	259	Thrombin heavy chain; serine protease, kringle, hy	99.74
1md8_A	329	C1R complement serine protease; innate immunity, a	99.74
2jde_A	276	Urokinase-type plasminogen activator; plasminogen	99.74
1fuj_A	221	PR3, myeloblastin; hydrolase, serine protease, gly	99.74
2jkh_A	241	Activated factor XA heavy chain; plasma, calcium,	99.74
1elv_A	333	Complement C1S component; trypsin-like serin prote	99.73
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	99.73
2f83_A	625	Coagulation factor XI; protease, apple domain, hyd	99.73
3mhw_U	247	Urokinase-type plasminogen activator; hydrolase, b	99.73
1gpz_A	399	Complement C1R component; hydrolase, activation, i	99.72
3nxp_A	424	Prethrombin-1; allostery, blood coagulation, hydro	99.71
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	99.7
1si5_H	240	Scatter factor, hepatocyte growth factor, SF, hepa	99.68
2asu_B	234	Hepatocyte growth factor-like protein; serine prot	99.67
2xrc_A	565	Human complement factor I; immune system, hydrolas	99.65
3beu_A	224	Trypsin, SGT; beta sheets, serine protease, hydrol	99.65
2vnt_A	276	Urokinase-type plasminogen activator; UPA, inhibit	99.61
1ddj_A	247	Plasminogen; catalytic domain, blood clotting; 2.0	99.6
1p3c_A	215	Glutamyl-endopeptidase; serine protease, hydrolase	99.55
1rrk_A	497	Complement factor B; BB, hydrolase; 2.00A {Homo sa	99.48
4dur_A	791	Plasminogen, serine protease; fibrinolysis, hydrol	99.47
2odp_A	509	Complement C2; C3/C5 convertase, complement serin	99.43
3hrz_D	741	Complement factor B; serine protease, glycosilated	99.4
3cp7_A	218	Alkaline serine protease Al20; trypsin-like, hydro	99.39
1agj_A	242	Epidermolytic toxin A; hydrolase, serine protease;	99.17
1yph_C	131	Chymotrypsin A, chain B; serine protease, hydrolas	99.05
1qtf_A	246	Exfoliative toxin B; serine protease, superantigen	98.93
2o8l_A	274	V8 protease, taphylococcal serine; serine protease	98.86
2pka_B	152	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	98.8
1wcz_A	268	Glutamyl endopeptidase; virulence factor, hydrolas	98.8
2as9_A	210	Serine protease; trypsin-like fold, hydrolase; 1.7	98.78
2vid_A	204	Serine protease SPLB; hydrolase; 1.80A {Staphyloco	98.7
2qa9_E	185	Streptogrisin-B; chymotrypsin-type serine peptidas	98.7
1iau_A	227	Granzyme B; hydrolase-hydrolase inhibitor complex;	98.68
1euf_A	227	Duodenase; serine protease, dual specificity, hydr	98.67
2f9n_A	245	Alpha I tryptase; serine proteinase, trypsin-like,	98.66
1eq9_A	222	Chymotrypsin; FIRE ANT, serine proteinase, hydrola	98.65
3ncl_A	241	Suppressor of tumorigenicity 14 protein; proteinas	98.65
1cgh_A	224	Cathepsin G; inflammation, specificity, serine pro	98.65
3fzz_A	227	Granzyme C; hydrolase, cytolysis, protease, serine	98.64
1pyt_D	251	TC, PCPA-TC, chymotrypsinogen C; ternary complex (	98.64
2oq5_A	232	Transmembrane protease, serine 11E; type II trans-	98.63
4dgj_A	235	Enteropeptidase catalytic light chain; serine prot	98.63
2f91_A	237	Hepatopancreas trypsin; trypsin, canonical inhibit	98.62
1bru_P	241	Elastase, PPE; serine protease, hydrolase; HET: 1N	98.62
1t8o_A	245	Chymotrypsin A; chymotrypsin, serine proteinase, B	98.62
1hj8_A	222	Trypsin I; hydrolase, radiation damage, disulphide	98.62
3mfj_A	223	Cationic trypsin; serine proteinase, hydrolase; 0.	98.62
2any_A	241	Kininogenin, plasma kallikrein, light chain, fletc	98.61
1fxy_A	228	Coagulation factor XA-trypsin chimera; protease, c	98.61
1orf_A	234	Granzyme A; hydrolase-hydrolase inhibitor complex;	98.6
2b9l_A	394	Prophenoloxidase activating factor; CLIP domain, e	98.59
1fon_A	240	Procarboxypeptidase A-S6; truncated zymogen E, ser	98.59
1z8g_A	372	Serine protease hepsin; serine protease hepsin, pr	98.59
2z7f_E	218	Leukocyte elastase; serine protease, serine protea	98.59
2olg_A	278	Pro-phenoloxidase activating enzyme-I; prophenolox	98.58
2w7s_A	200	Serine protease SPLA; hydrolase, family S1; 1.80A	98.58
3bg8_A	238	Coagulation factor XIA light chain; protease inhib	98.57
2qxi_A	224	Kallikrein-7; S1 pocket, chloromethyl ketone, alte	98.57
1fiw_A	290	Beta-acrosin heavy chain; anti-parallel beta-barre	98.57
1ym0_A	238	Fibrinotic enzyme component B; two chains, glycosy	98.56
4i8h_A	223	Cationic trypsin, beta-trypsin; serine protease, h	98.56
1gvk_B	240	Elastase 1, peptide inhibitor; hydrolase, serine p	98.56
2zgc_A	240	Granzyme M; serine protease, cytolysis, glycoprote	98.56
2psx_A	227	Kallikrein-5; zinc inhibition, stratum corneum, gl	98.55
1azz_A	226	Collagenase; complex (serine protease/inhibitor),	98.55
1mza_A	240	Pro-granzyme K; apoptosis, serine protease, S1 fam	98.55
2bdg_A	223	Kallikrein-4; serine proteinase, S1 subsite, 70-80	98.54
2xw9_A	228	Complement factor D; immune system, hydrolase, ser	98.52
3gyl_B	261	Prostasin; ENAC, zymogen, divalent cation, channel	98.52
2aiq_A	231	Protein C activator; snake venom serine proteinase	98.52
4ag1_A	226	Chymase; hydrolase-de novo protein complex, inhibi	98.51
2asu_B	234	Hepatocyte growth factor-like protein; serine prot	98.51
1m9u_A	241	Earthworm fibrinolytic enzyme; hydrolase, serine p	98.5
1ao5_A	237	Glandular kallikrein-13; serine protease, protein	98.5
1elt_A	236	Elastase; serine proteinase; 1.61A {Salmo salar} S	98.5
1rtf_B	252	(TC)-T-PA, two chain tissue plasminogen activator;	98.5
1fuj_A	221	PR3, myeloblastin; hydrolase, serine protease, gly	98.5
1lo6_A	223	Kallikrein 6, HK6; serine protease, human kallikre	98.5
3s69_A	234	Thrombin-like enzyme defibrase; beta-barrel, serin	98.49
2xxl_A	408	GRAM-positive specific serine protease, isoform B;	98.49
1a7s_A	225	Heparin binding protein; serine protease homolog,	98.48
3rp2_A	224	RAT MAST cell protease II; serine proteinase; 1.90	98.48
3gov_B	251	MAsp-1; complement, serine protease, beta barrel,	98.48
4e7n_A	238	Snake-venom thrombin-like enzyme; beta-barrel, hyd	98.48
2zch_P	237	Prostate-specific antigen; human PSA, kallikrein r	98.46
3s9c_A	234	Vipera russelli proteinase RVV-V gamma; serine pro	98.44
2r0l_A	248	Hepatocyte growth factor activator; serine proteas	98.44
4f4o_C	347	Haptoglobin; globin fold, serine protease fold, co	98.44
1ton_A	235	Tonin; hydrolase(serine proteinase); 1.80A {Rattus	98.43
1npm_A	225	Neuropsin; serine proteinase, glycoprotein; HET: N	98.43
2qy0_B	242	Complement C1R subcomponent; serine protease, beta	98.42
1ddj_A	247	Plasminogen; catalytic domain, blood clotting; 2.0	98.42
1si5_H	240	Scatter factor, hepatocyte growth factor, SF, hepa	98.41
1pq7_A	224	Trypsin; ultra-high resolution, catalysis, hydrola	98.41
1gvz_A	237	Kallikrein-1E2; antigen, prostate specific antigen	98.41
1sgf_A	240	7S NGF, nerve growth factor; growth factor (beta-N	98.4
1md8_A	329	C1R complement serine protease; innate immunity, a	98.4
3h7o_A	228	Group 3 allergen smipp-S YV6023A04; hydrolase; 1.8	98.39
3h7t_A	235	Group 3 allergen smipp-S YVT004A06; hydrolase; 2.0	98.39
1elv_A	333	Complement C1S component; trypsin-like serin prote	98.38
1yc0_A	283	Hepatocyte growth factor activator; hydrolase/inhi	98.38
1spj_A	238	Kallikrein 1; serine protease, KLK1, HK1, hydrolas	98.38
1aut_C	250	Activated protein C; serine proteinase, plasma cal	98.38
3tvj_B	242	Mannan-binding lectin serine protease 2 B chain; i	98.37
2jkh_A	241	Activated factor XA heavy chain; plasma, calcium,	98.36
2bz6_H	254	Blood coagulation factor VIIA; serine protease, en	98.34
2bdy_A	289	Thrombin; thrombin, complex structure, hydrolase,	98.33
1gpz_A	399	Complement C1R component; hydrolase, activation, i	98.31
2hlc_A	230	Collagenase; serine protease, hydrolase, collagen	98.29
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	98.28
2jde_A	276	Urokinase-type plasminogen activator; plasminogen	98.27
2f83_A	625	Coagulation factor XI; protease, apple domain, hyd	98.26
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	98.26
3mhw_U	247	Urokinase-type plasminogen activator; hydrolase, b	98.25
1arb_A	268	Achromobacter protease I; hydrolase(serine proteas	98.22
2wph_S	235	Coagulation factor IXA heavy chain; serine proteas	98.16
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.15
2xrc_A	565	Human complement factor I; immune system, hydrolas	98.1
3rm2_H	259	Thrombin heavy chain; serine protease, kringle, hy	98.07
4dur_A	791	Plasminogen, serine protease; fibrinolysis, hydrol	98.0
3nxp_A	424	Prethrombin-1; allostery, blood coagulation, hydro	97.99
2vnt_A	276	Urokinase-type plasminogen activator; UPA, inhibit	97.81
3k6y_A	237	Serine protease, possible membrane-associated seri	97.75
1l1j_A	239	Heat shock protease HTRA; hydrolase, serine protei	97.57
1p3c_A	215	Glutamyl-endopeptidase; serine protease, hydrolase	97.57
3beu_A	224	Trypsin, SGT; beta sheets, serine protease, hydrol	97.52
3tjo_A	231	Serine protease HTRA1; peptidase, hydrolase; HET:	97.37
3qo6_A	348	Protease DO-like 1, chloroplastic; protease, HTRA,	97.33
3cp7_A	218	Alkaline serine protease Al20; trypsin-like, hydro	97.24
3num_A	332	Serine protease HTRA1; DEGP, hydrolase; 2.75A {Hom	97.24
1agj_A	242	Epidermolytic toxin A; hydrolase, serine protease;	97.22
2sga_A	181	Proteinase A; hydrolase (serine proteinase); 1.50A	97.15
1y8t_A	324	Hypothetical protein RV0983; serine protease, stru	97.13
3lgi_A	237	Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydro	97.12
1lcy_A	325	HTRA2 serine protease; apoptosis, PDZ domain, casp	97.03
2odp_A	509	Complement C2; C3/C5 convertase, complement serin	97.02
2o8l_A	274	V8 protease, taphylococcal serine; serine protease	96.98
2qa9_E	185	Streptogrisin-B; chymotrypsin-type serine peptidas	96.93
1wcz_A	268	Glutamyl endopeptidase; virulence factor, hydrolas	96.89
1rrk_A	497	Complement factor B; BB, hydrolase; 2.00A {Homo sa	96.86
1qtf_A	246	Exfoliative toxin B; serine protease, superantigen	96.74
2as9_A	210	Serine protease; trypsin-like fold, hydrolase; 1.7	96.62
3hrz_D	741	Complement factor B; serine protease, glycosilated	96.61
2vid_A	204	Serine protease SPLB; hydrolase; 1.80A {Staphyloco	96.52
2w7s_A	200	Serine protease SPLA; hydrolase, family S1; 1.80A	96.45
3sti_A	245	Protease DEGQ; serine protease, PDZ domain, chaper	95.09
2ea3_A	189	Chymotrypsin; celloulomonas, protease, hydrolase;	94.17
1hpg_A	187	Glutamic acid specific protease; serine protease,	94.17
1te0_A	318	Protease DEGS; two domains, serine protease, PDZ,	93.72
3pv2_A	451	DEGQ; trypsin fold, PDZ domain, chaperone protease	93.61
1arb_A	268	Achromobacter protease I; hydrolase(serine proteas	92.95
2sga_A	181	Proteinase A; hydrolase (serine proteinase); 1.50A	92.78
1l1j_A	239	Heat shock protease HTRA; hydrolase, serine protei	92.63
3k6y_A	237	Serine protease, possible membrane-associated seri	92.48
3stj_A	345	Protease DEGQ; serine protease, PDZ domain, protea	91.2
4a8c_A	436	Periplasmic PH-dependent serine endoprotease DEGQ;	91.08
3tjo_A	231	Serine protease HTRA1; peptidase, hydrolase; HET:	90.92
2pfe_A	186	Protease A, alkaline serine protease, TFPA; beta-b	89.9
3qo6_A	348	Protease DO-like 1, chloroplastic; protease, HTRA,	89.65
1y8t_A	324	Hypothetical protein RV0983; serine protease, stru	89.4
2oua_A	188	Serine protease, protein NAPA; kinetic stability,	85.67
3lgi_A	237	Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydro	85.07
3num_A	332	Serine protease HTRA1; DEGP, hydrolase; 2.75A {Hom	84.3
1lcy_A	325	HTRA2 serine protease; apoptosis, PDZ domain, casp	83.13

>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...

Probab=99.84  E-value=4.1e-21  Score=120.91  Aligned_cols=122  Identities=20%  Similarity=0.427  Sum_probs=93.1

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      +.+.|.++++||+|+.....+|||||+|++++.++++++|+|||..... .+..++++|||.+.......+..|+++.  
T Consensus        63 ~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~-~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~  141 (223)
T 3mfj_A           63 QFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGNTKSSGTSYPDVLKCLKAP  141 (223)
T ss_dssp             EEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCSSCCC-TTCEEEEEESSCCCSSSCCCCSSCEEEEEE
T ss_pred             EEEEeeEEEECCCCCCCCCCCCEEEEEeCCCcccCCcEeeeECCCCCCC-CCCEEEEEeeeccCCCCCcccchheEEEEE
Confidence            4678999999999999889999999999999999999999999976653 7889999999988644333456677655  


Q ss_pred             -ccCCeEEEEeccce----eec---cCeeeeecCCCCCCC--CCceEEEEeeccc
Q psy15292         80 -ISNDVALIKIDKDV----VFK---QHIIPVCLPDQTVKL--VGKSATVAGWGRT  124 (132)
Q Consensus        80 -~~~d~c~~~~~~~~----~~~---~~v~~icl~~~~~~~--~g~~~~v~gwg~~  124 (132)
                       ++++.|...+...+    -..   ......|.++++.++  .+....|..||..
T Consensus       142 ~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~l~GI~S~g~~  196 (223)
T 3mfj_A          142 ILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGSG  196 (223)
T ss_dssp             BCCHHHHHHHSTTTCCTTEEEESCTTSSCBCCTTCTTCEEEETTEEEEEEEECSS
T ss_pred             EeCHHHhhhhhcCcCCCCEEEccCCCCCCCcCCCCcccceEECCEEEEEEEECCC
Confidence             67777765442211    111   122347888888887  7889999999953

>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A

Probab=99.84  E-value=4.2e-21  Score=121.12  Aligned_cols=120  Identities=19%  Similarity=0.321  Sum_probs=91.9

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCc-ccCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK-LVGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~-~~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.++++||+|+...+.+|||||+|++++.++++++|+|||..... ..+..++++|||.+.... ..+..|+.+. 
T Consensus        67 ~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~-~~~~~L~~~~~  145 (227)
T 1iau_A           67 QFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLG-KHSHTLQEVKM  145 (227)
T ss_dssp             EEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSSSSS-CCCSBCEEEEE
T ss_pred             EEEEEEEEECCCCCCCCCCCCCeEEEEECCcccCCCceecccCCCCCCCCCCCCEEEEEEcccCCCCC-CcCceeeEeee
Confidence            5678999999999999899999999999999999999999999976543 378899999999876543 2456677655 


Q ss_pred             --ccCCeEEEEeccceeeccC--------eeeeecCCCCCCC--CCceEEEEeec
Q psy15292         80 --ISNDVALIKIDKDVVFKQH--------IIPVCLPDQTVKL--VGKSATVAGWG  122 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~~~~~--------v~~icl~~~~~~~--~g~~~~v~gwg  122 (132)
                        ++++.|...+...+.....        ....|.++++.++  .+....|..||
T Consensus       146 ~i~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~l~Gi~S~g  200 (227)
T 1iau_A          146 TVQEDRKCESDLRHYYDSTIELCVGDPEIKKTSFKGDSGGPLVCNKVAQGIVSYG  200 (227)
T ss_dssp             EBCCHHHHHHHTTTTCCTTTEEEESCTTSCCBCCTTCTTSEEEETTEEEEEEEEE
T ss_pred             eeechHHhhhHhccccCCCcEEEeECCCCCCeeeecCCCchheEeeEEEEEEeEe
Confidence              6677776544322111111        2357888888877  78888999999

>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2

Probab=99.84  E-value=9.6e-21  Score=120.02  Aligned_cols=125  Identities=26%  Similarity=0.382  Sum_probs=94.9

Q ss_pred             eEEeeeEEEeCCCCCC-----------CCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCc
Q psy15292          2 FKLNTRQSFVHPQYSP-----------SDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSL   70 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~-----------~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~   70 (132)
                      +.+.|.++++||+|+.           ....+|||||+|++++.++++++|+|||..... .+..++++|||.+......
T Consensus        62 ~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~-~~~~~~v~GwG~~~~~~~~  140 (235)
T 1ton_A           62 QRRLVRQSFRHPDYIPLIVTNDTEQPVHDHSNDLMLLHLSEPADITGGVKVIDLPTKEPK-VGSTCLASGWGSTNPSEMV  140 (235)
T ss_dssp             EEECEEEEEECTTCCCC--------CCCCSTTCCEEEEESSCCCCCSSCCCCCCCCSCCC-TTCEEEEEESSCSSSSSCC
T ss_pred             eEEEEEEEEeCCCCcccccccccccccCCCcCCEEEEEcCCccccCCcceeeeCCCCCCC-CCCEEEEEecCCCCCCCCc
Confidence            4678999999999987           678899999999999999999999999976643 7889999999987654333


Q ss_pred             ccccceeee---ccCCeEEEEeccce----eec---cCeeeeecCCCCCCC--CCceEEEEeecccCcC
Q psy15292         71 SSAIPTYVS---ISNDVALIKIDKDV----VFK---QHIIPVCLPDQTVKL--VGKSATVAGWGRTRHA  127 (132)
Q Consensus        71 ~~~~l~~~~---~~~d~c~~~~~~~~----~~~---~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~~  127 (132)
                      .+..|+++.   ++++.|...+...+    -..   ......|.++++.++  .|....|..||...+.
T Consensus       141 ~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~l~Gi~S~g~~~C~  209 (235)
T 1ton_A          141 VSHDLQCVNIHLLSNEKCIETYKDNVTDVMLCAGEMEGGKDTCAGDSGGPLICDGVLQGITSGGATPCA  209 (235)
T ss_dssp             CCSBCEEEEEEEECGGGCGGGGSTTGGGGEEEEECTTCSCBCCTTCTTCEEEETTEEEEEECCCCSSCS
T ss_pred             cCccceEEEEEEeCHHHHHHHhcCcCCCCeEeeccCCCCCcCCCCCCccccEECCEEEEEEeeCCCCCC
Confidence            456677665   77888875443211    111   122357888998887  7888999999954443

>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*

Probab=99.84  E-value=5.8e-21  Score=120.49  Aligned_cols=124  Identities=19%  Similarity=0.325  Sum_probs=93.6

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      +.+.+.++++||+|+.....+|||||+|++++.+++.++|+|||.... ..+..++++|||.+.......+..|+++.  
T Consensus        66 ~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~-~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~  144 (227)
T 2psx_A           66 QMFQGVKSIPHPGYSHPGHSNDLMLIKLNRRIRPTKDVRPINVSSHCP-SAGTKCLVSGWGTTKSPQVHFPKVLQCLNIS  144 (227)
T ss_dssp             EEEEEEEEEECTTCCSSSCTTCCEEEEESSCCCCCSSSCCCCBCSSCC-CTTCEEEEEESSCSSSSSCCCCSBCEEEEEE
T ss_pred             EEEEEEEEEeCCCCCCCCCCCCEEEEEeCCCCCCCCceeeeECCCCCC-CCCCEEEEEeCcccCCCCCCCCchheEEEEE
Confidence            467899999999999988999999999999999999999999986543 37889999999988765434456677665  


Q ss_pred             -ccCCeEEEEeccce----ee-c-cCeeeeecCCCCCCC--CCceEEEEeecccCc
Q psy15292         80 -ISNDVALIKIDKDV----VF-K-QHIIPVCLPDQTVKL--VGKSATVAGWGRTRH  126 (132)
Q Consensus        80 -~~~d~c~~~~~~~~----~~-~-~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~  126 (132)
                       ++++.|...+...+    -. . ......|.++++.++  .+....|..||...+
T Consensus       145 i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~l~Gi~S~g~~~C  200 (227)
T 2psx_A          145 VLSQKRCEDAYPRQIDDTMFCAGDKAGRDSCQGDSGGPVVCNGSLQGLVSWGDYPC  200 (227)
T ss_dssp             BCCHHHHHHHSTTTCCTTEEEECCSTTCBCCTTCTTCEEEETTEEEEEEEECCSST
T ss_pred             ecCHhHhhhhcCCCCCCCEEcccCCCCCccCCCCCCcceeeCCEEEEEEeecCCCC
Confidence             66677765442211    01 1 112357888988887  688899999995444

>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A

Probab=99.84  E-value=5.1e-21  Score=120.56  Aligned_cols=125  Identities=23%  Similarity=0.349  Sum_probs=94.1

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      +.+.|.++++||+|+.....||||||+|++++.+++.++|+|||.... ..+..++++|||.+.......+..|+++.  
T Consensus        62 ~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~-~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~  140 (224)
T 2qxi_A           62 QRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKKVRLPSRCE-PPGTTCTVSGWGTTTSPDVTFPSDLMCVDVK  140 (224)
T ss_dssp             EEEEECEEEECTTCCTTTCTTCCEEEECSSCCCCBTTBCCCCCCSSCC-CTTCEEEEEESSCSSSSSCCCCSBCEEEEEE
T ss_pred             EEEEEEEEEECCCCCCCCCcCcEEEEEeCCCCcCCCceeeEECCCCCC-CCCCEEEEEeCCccCCCCCCCChhheEEEee
Confidence            467899999999999989999999999999999999999999997654 37889999999987644333456677655  


Q ss_pred             -ccCCeEEEEeccce----ee---ccCeeeeecCCCCCCC--CCceEEEEeecccCcC
Q psy15292         80 -ISNDVALIKIDKDV----VF---KQHIIPVCLPDQTVKL--VGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 -~~~d~c~~~~~~~~----~~---~~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~~  127 (132)
                       ++++.|...+...+    ..   .......|.++++.++  .+....|..||...+.
T Consensus       141 ~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~l~Gi~S~g~~~C~  198 (224)
T 2qxi_A          141 LISPQDCTKVYKDLLENSMLCAGIPDSKKNACNGDSGGPLVCRGTLQGLVSWGTFPCG  198 (224)
T ss_dssp             EECHHHHHHHHGGGCCTTEEEEECTTCCCBCCTTCTTCEEEETTEEEEEEEECCSSSC
T ss_pred             ecCHHHhhHHhcCcCCCCeEEecCCCCCCccCCCCccccEEECCEEEEEEEeCCCCCC
Confidence             66677764432211    11   1122357888998887  7888999999954443

>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*

Probab=99.83  E-value=1e-20  Score=119.09  Aligned_cols=123  Identities=24%  Similarity=0.333  Sum_probs=93.7

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      +.+.|.++++||+|+...+.||||||+|++++.+++.++|+||+..... .+..++++|||.+...  ..+..|+++.  
T Consensus        65 ~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~pi~l~~~~~~-~~~~~~v~GwG~~~~~--~~~~~L~~~~~~  141 (223)
T 2bdg_A           65 QMVEASLSVRHPEYNRPLLANDLMLIKLDESVSESDTIRSISIASQCPT-AGNSCLVSGWGLLANG--RMPTVLQCVNVS  141 (223)
T ss_dssp             EEEEEEEEEECTTTTSSTTCSCCEEEEESSCCCCCSSCCCCCBCSSCCC-TTCEEEEEESCCCTTS--CCCSBCEEEEEE
T ss_pred             EEEEEEEEEeCCCCCCCCCcCcEEEEEECCcccCCCceecccCCCCCCC-CCCEEEEEeCcccCCC--CCCCcceEEEEE
Confidence            4578899999999999899999999999999999999999999976543 7889999999987654  3456677655  


Q ss_pred             -ccCCeEEEEeccce----eec---cCeeeeecCCCCCCC--CCceEEEEeecccCcC
Q psy15292         80 -ISNDVALIKIDKDV----VFK---QHIIPVCLPDQTVKL--VGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 -~~~d~c~~~~~~~~----~~~---~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~~  127 (132)
                       ++++.|...+...+    -..   ......|.++++.++  .+....|..||...+.
T Consensus       142 ~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~l~Gi~S~g~~~C~  199 (223)
T 2bdg_A          142 VVSEEVCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSGGPLICNGYLQGLVSFGKAPCG  199 (223)
T ss_dssp             BCCHHHHHHHSTTTCCTTEEEECCSTTCCBCCTTCTTCEEEETTEEEEEEEECCSSTT
T ss_pred             EeCHHHhhhhhCCCCCCCeEeccCCCCCCCcCCCCCCchheEccEEEEEEEecCCCCC
Confidence             67777765443211    111   122357888988887  7889999999974443

>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2

Probab=99.83  E-value=1.2e-20  Score=118.90  Aligned_cols=123  Identities=20%  Similarity=0.349  Sum_probs=92.0

Q ss_pred             eEEeeeEEEeCCCC-CC--CCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceee
Q psy15292          2 FKLNTRQSFVHPQY-SP--SDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYV   78 (132)
Q Consensus         2 ~~~~v~~~~~h~~y-~~--~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~   78 (132)
                      +.+.|.++++||+| +.  ....+|||||+|++++.|+++++|+|||..... .+..++++|||.+.......+..|+++
T Consensus        64 ~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L~~~~~~~~~v~pi~L~~~~~~-~~~~~~v~GwG~~~~~~~~~~~~L~~~  142 (225)
T 1npm_A           64 QEIQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSANLGDKVKPVQLANLCPK-VGQKCIISGWGTVTSPQENFPNTLNCA  142 (225)
T ss_dssp             EEECEEEEEECTTCCSSCTTCCTTCCEEEEESSCCCCSSSSCCCEECSSCCC-TTCEEEEEESSCSSSSSCCCCSBCEEE
T ss_pred             EEEEEEEEEECCCCCCCCccCccccEEEEeeCCcccCCCceeceECCCCCCC-CCCEEEEEeCCcccCCCCCCCccceEe
Confidence            56789999999999 55  678899999999999999999999999976543 788999999998744333345667765


Q ss_pred             e---ccCCeEEEEeccceeeccC-------eeeeecCCCCCCC--CCceEEEEeecccCc
Q psy15292         79 S---ISNDVALIKIDKDVVFKQH-------IIPVCLPDQTVKL--VGKSATVAGWGRTRH  126 (132)
Q Consensus        79 ~---~~~d~c~~~~~~~~~~~~~-------v~~icl~~~~~~~--~g~~~~v~gwg~~~~  126 (132)
                      .   ++++.|...+...+ ....       -...|.++++.++  .|....|..||...+
T Consensus       143 ~~~~~~~~~C~~~~~~~~-~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~l~GI~S~g~~~C  201 (225)
T 1npm_A          143 EVKIYSQNKCERAYPGKI-TEGMVCAGSSNGADTCQGDSGGPLVCDGMLQGITSWGSDPC  201 (225)
T ss_dssp             EEEECCHHHHHHHSTTTC-CTTEEEEECTTCCBCCTTCTTCEEEETTEEEEEEEECCSSS
T ss_pred             EEeeecHHHhhHHhCCCC-CCCEEeecCCCCCeecCCCCCchheECCEEEEEEEeCCCCC
Confidence            5   66777765443211 0111       2357889998887  788899999995443

>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2

Probab=99.83  E-value=8.2e-21  Score=119.87  Aligned_cols=122  Identities=16%  Similarity=0.328  Sum_probs=93.2

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      +.+.|.+++.||+|+...+.+|||||+|++++.|+++++|+|||..... .+..++++|||.+.......+..|+.+.  
T Consensus        67 ~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~  145 (228)
T 1fxy_A           67 AVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPASLPTAPPA-TGTKCLISGWGNTASSGADYPDELQCLDAP  145 (228)
T ss_dssp             EEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCCCCSSCCC-TTCEEEEEESSCCCSSSCCCCSSCEEEEEE
T ss_pred             EEEEEEEEEECCCCCCCCCcCcEEEEEECCcccCCCceeccCCCCCCCC-CCCEEEEEecCccCCCCCCCCccceEEEEE
Confidence            4578899999999999899999999999999999999999999976543 7889999999988655433456677655  


Q ss_pred             -ccCCeEEEEeccce----eec---cCeeeeecCCCCCCC--CCceEEEEeeccc
Q psy15292         80 -ISNDVALIKIDKDV----VFK---QHIIPVCLPDQTVKL--VGKSATVAGWGRT  124 (132)
Q Consensus        80 -~~~d~c~~~~~~~~----~~~---~~v~~icl~~~~~~~--~g~~~~v~gwg~~  124 (132)
                       ++++.|...+...+    ...   ..-...|.++++.++  .+....|..||..
T Consensus       146 ~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~l~Gi~S~g~~  200 (228)
T 1fxy_A          146 VLSQAKCEASYPGKITSNMFCVGFLEGGKDSCQGDSGGPVVCNGQLQGVVSWGDG  200 (228)
T ss_dssp             BCCHHHHHHHSTTTCCTTEEEESCTTCSCBCCTTCTTCEEEETTEEEEEEEECSS
T ss_pred             EeCHHHhHhhcCCCCCCCEEEeccCCCCCccccCccccceEECCEEEEEEEECCC
Confidence             66777765442211    010   112347888998887  7889999999963

>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*

Probab=99.83  E-value=7.4e-21  Score=119.80  Aligned_cols=120  Identities=22%  Similarity=0.365  Sum_probs=91.0

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCc-ccCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK-LVGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~-~~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.++++||+|+.....||||||+|++++.++++++|+|||..... ..+..++++|||.+...  ..+..|+++. 
T Consensus        67 ~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~--~~~~~l~~~~~  144 (224)
T 1cgh_A           67 QHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMR--RGTDTLREVQL  144 (224)
T ss_dssp             EEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSS--CCCSBCEEEEE
T ss_pred             EEEEEEEEEcCCCCCCCCCcCCEEEEEECCCCcCCCceEeeECCCCCCCCCCCCEEEEEECCcCCCC--CCCCcceEEEE
Confidence            5678999999999999889999999999999999999999999976543 27889999999987632  2355677655 


Q ss_pred             --ccCCeEEEEecc-----ceeec--cCeeeeecCCCCCCC--CCceEEEEeecc
Q psy15292         80 --ISNDVALIKIDK-----DVVFK--QHIIPVCLPDQTVKL--VGKSATVAGWGR  123 (132)
Q Consensus        80 --~~~d~c~~~~~~-----~~~~~--~~v~~icl~~~~~~~--~g~~~~v~gwg~  123 (132)
                        ++++.|...+..     .+-..  ......|.++++.++  .+....|..||.
T Consensus       145 ~i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~l~Gi~S~g~  199 (224)
T 1cgh_A          145 RVQRDRQCLRIFGSYDPRRQICVGDRRERKAAFKGDSGGPLLCNNVAHGIVSYGK  199 (224)
T ss_dssp             EBCCHHHHHHHCTTCCTTTEEEECCTTSCCBCCTTCTTCEEEETTEEEEEEEECC
T ss_pred             EeeCHHHHHHHhCcCCCcceEeeccCCCCCeEeeCCCccceEEccEEEEEEEEEC
Confidence              667777654421     11111  112357888888887  788899999997

>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*

Probab=99.83  E-value=1.7e-20  Score=118.13  Aligned_cols=123  Identities=15%  Similarity=0.272  Sum_probs=92.8

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      +.+.|.++++||+|+...+.+|||||+|++++.++++++|+|||..... .+..++++|||.+. . ...+..|+++.  
T Consensus        64 ~~~~v~~i~~Hp~y~~~~~~~DIAll~L~~~~~~~~~v~pi~l~~~~~~-~~~~~~v~GwG~~~-~-~~~~~~l~~~~~~  140 (223)
T 1lo6_A           64 EQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSELIQPLPLERDCSA-NTTSCHILGWGKTA-D-GDFPDTIQCAYIH  140 (223)
T ss_dssp             EEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCCBCCCTTC-CCCEEEEEESSCCT-T-SSCCSBCEEEEEE
T ss_pred             EEEEEEEEEECCCCCCCCCcCeEEEEEECCcccCCCceeecccCCCCCC-CCCEEEEEEECCCC-C-CCcCceeeEEEEE
Confidence            4678999999999999899999999999999999999999999976653 78899999999876 2 23456677655  


Q ss_pred             -ccCCeEEEEeccce----eec---cCeeeeecCCCCCCC--CCceEEEEeecccCcC
Q psy15292         80 -ISNDVALIKIDKDV----VFK---QHIIPVCLPDQTVKL--VGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 -~~~d~c~~~~~~~~----~~~---~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~~  127 (132)
                       ++++.|...+...+    -..   ..-...|.++++.++  .+....|..||...+.
T Consensus       141 ~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~l~Gi~S~g~~~C~  198 (223)
T 1lo6_A          141 LVSREECEHAYPGQITQNMLCAGDEKYGKDSCQGDSGGPLVCGDHLRGLVSWGNIPCG  198 (223)
T ss_dssp             EECHHHHHHHSTTTCCTTEEEEECTTTCCBCCTTTTTCEEEETTEEEEEEEECCSSCC
T ss_pred             EeCHHHhhhhhCCCCCCCeEEeecCCCCCeeccccCCCcEEeCCEEEEEEeeCCCCCC
Confidence             67777765442211    111   112357888888877  7888999999954443

>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A

Probab=99.83  E-value=1.4e-20  Score=118.37  Aligned_cols=121  Identities=24%  Similarity=0.381  Sum_probs=92.3

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      +.+.|.++++||+|+.....+|||||+|++|+.++++++|+|||..... .+..++++|||.+.... ..+..|+++.  
T Consensus        63 ~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~-~~~~~~v~GwG~~~~~~-~~~~~L~~~~~~  140 (222)
T 1hj8_A           63 QFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSCAP-AGTMCTVSGWGNTMSST-ADSNKLQCLNIP  140 (222)
T ss_dssp             EEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCSSSCCCCBCCSSCCC-TTCEEEEEESSCCCCSS-CCTTBCEEEEEE
T ss_pred             EEEEEEEEEECCCCCCCCCCCcEEEEEECCcccCCCceeccCCCCCCCC-CCCEEEEEECCCCCCCC-CCCceeEEEEEE
Confidence            4678999999999999889999999999999999999999999976543 78899999999876543 2356677655  


Q ss_pred             -ccCCeEEEEeccce----eec---cCeeeeecCCCCCCC--CCceEEEEeeccc
Q psy15292         80 -ISNDVALIKIDKDV----VFK---QHIIPVCLPDQTVKL--VGKSATVAGWGRT  124 (132)
Q Consensus        80 -~~~d~c~~~~~~~~----~~~---~~v~~icl~~~~~~~--~g~~~~v~gwg~~  124 (132)
                       ++++.|...+...+    ...   ......|.++++.++  .|....|..||..
T Consensus       141 ~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~l~Gi~S~g~~  195 (222)
T 1hj8_A          141 ILSYSDCNNSYPGMITNAMFCAGYLEGGKDSCQGDSGGPVVCNGELQGVVSWGYG  195 (222)
T ss_dssp             BCCHHHHHHHSTTCCCTTEEEESCTTSSCBCCTTCTTCEEEETTEEEEEEEECSS
T ss_pred             EcCHHHhhhhccCCCCCCeEEeccCCCCCccCCCCcccceEECCEEEEEEeecCC
Confidence             66677765442211    111   122347888998887  7888999999963

>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}

Probab=99.83  E-value=1.1e-20  Score=119.84  Aligned_cols=123  Identities=24%  Similarity=0.466  Sum_probs=91.1

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      +.+.|.++++||+|+...+.+|||||+|.+++.|+++++|+|||.......+..++++|||.+.......+..|+.+.  
T Consensus        70 ~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~l~~~~~~  149 (238)
T 1ym0_A           70 QTHDVDSIFVNENYDPATLENDVSVIKTAVAITFDINVGPICAPDPANDYVYRKSQCSGWGTINSGGVCCPAVLRYVTLN  149 (238)
T ss_dssp             EEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCSSSCCCCBCCCTTCCCTTCEEEEEESCCSSTTCCSCCSBCEEEEEE
T ss_pred             eEEEEEEEEECCCCCCCCCcccEEEEEeCCCccccCcccccCCCCCcCCCCCCceEEEeecCCCCCCCcCCccceEEEEE
Confidence            567899999999999989999999999999999999999999997654337888999999987765433356677655  


Q ss_pred             -ccCCeEEEEeccceeeccCe----------eeeecCCCCCCC--CC-----ceEEEEeeccc
Q psy15292         80 -ISNDVALIKIDKDVVFKQHI----------IPVCLPDQTVKL--VG-----KSATVAGWGRT  124 (132)
Q Consensus        80 -~~~d~c~~~~~~~~~~~~~v----------~~icl~~~~~~~--~g-----~~~~v~gwg~~  124 (132)
                       ++++.|...+.........+          ...|.++++.++  ..     ....|..||..
T Consensus       150 ~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~  212 (238)
T 1ym0_A          150 ITTNAFCDAVYTSDTIYDDMICATDNTGMTDRDSCQGDSGGPLSVKDGSGIFSLVGIVSWGIG  212 (238)
T ss_dssp             ECCHHHHHHHCTTSCCCTTEEEEECSSCSSSCBCCTTTTTCEEEEECTTCCEEEEEEEEECSS
T ss_pred             eeCHHHHhHhhcccccCCCeEEecCCCCCCcCccCCCccCCeeEEECCCCCEEEEEEEeECCC
Confidence             66677764432211111111          457888888777  22     47889999853

>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2

Probab=99.83  E-value=1.8e-20  Score=118.90  Aligned_cols=121  Identities=20%  Similarity=0.400  Sum_probs=90.7

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      +.+.|.++++||+|+.....||||||+|++++.|+++++|+|||..... .+..++++|||.+..... .+..|+.+.  
T Consensus        75 ~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~v~GwG~~~~~~~-~~~~L~~~~~~  152 (237)
T 2f91_A           75 QIITVSKIILHENFDYNLLDNDISLLKLSGSLTFNDNVAPIALPEQGHT-ATGDVIVTGWGTTSEGGN-TPDVLQKVTVP  152 (237)
T ss_dssp             EEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCCTTCC-CCSEEEEEESCCSSTTCC-CCSBCEEEEEE
T ss_pred             EEEEEEEEEECCCCCCCCCCCcEEEEEECCCcccCCceeeccCCCCCCC-CCCcEEEEECCcCCCCCC-ccceeeEEEEe
Confidence            5678999999999999889999999999999999999999999976653 678899999998765442 355677655  


Q ss_pred             -ccCCeEEEEeccceeecc--------CeeeeecCCCCCCC--CC----ceEEEEeeccc
Q psy15292         80 -ISNDVALIKIDKDVVFKQ--------HIIPVCLPDQTVKL--VG----KSATVAGWGRT  124 (132)
Q Consensus        80 -~~~d~c~~~~~~~~~~~~--------~v~~icl~~~~~~~--~g----~~~~v~gwg~~  124 (132)
                       ++++.|...+........        .....|.++++.++  .+    ....|..||..
T Consensus       153 ~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~  212 (237)
T 2f91_A          153 LVSDEDCRADYGADEILDSMICAGVPEGGKDSCQGDSGGPLAASDTGSTYLAGIVSWGYG  212 (237)
T ss_dssp             EECHHHHHHHHCTTTSCTTEEEECCTTCCCBCCTTCTTCEEEECTTSSCEEEEEEEEESS
T ss_pred             EcCHHHhhhhhCCCCcCCCeEEEecCCCCCCCCCCcCCCCeEEecCCCEEEEEEEEecCC
Confidence             677777654321111111        12347888888777  33    57899999853

>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*

Probab=99.83  E-value=1.5e-20  Score=118.85  Aligned_cols=124  Identities=18%  Similarity=0.314  Sum_probs=93.5

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      +.+.+.+++.||+|+...+.+|||||+|++++.++++++|+|||..... .+..++++|||.+.......+..++++.  
T Consensus        64 ~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picL~~~~~~-~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~  142 (231)
T 2aiq_A           64 RRFPKEKYFCLNTRNDTIWDKDIMLIRLNRPVRNSAHIAPLSLPSNPPS-VGSVCRIMGWGTITSPNATLPDVPHCANIN  142 (231)
T ss_dssp             EECEEEEECCSSCCSSSTTTTCCEEEEESSCCCCBTTBCCCCCCSSCCC-TTCEEEEEESSCSSSSSCCCCSSCEEEEEE
T ss_pred             EEEEEEEEEECCCCCCCCCCCCEEEEEecCCCCCCCcEEeeECCCCCCC-CCCEEEEEeCCccCCCCCccCchhhhccce
Confidence            3567899999999999899999999999999999999999999976653 6889999999987654434456677655  


Q ss_pred             -ccCCeEEEEecc---ceee---ccCeeeeecCCCCCCC--CCceEEEEeecccCc
Q psy15292         80 -ISNDVALIKIDK---DVVF---KQHIIPVCLPDQTVKL--VGKSATVAGWGRTRH  126 (132)
Q Consensus        80 -~~~d~c~~~~~~---~~~~---~~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~  126 (132)
                       ++++.|...+..   ....   .......|.++++.++  .|....|..||...+
T Consensus       143 ~~~~~~C~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~l~Gi~S~g~~~C  198 (231)
T 2aiq_A          143 ILDYAVCQAAYKGLAATTLCAGILEGGKDTCKGDSGGPLICNGQFQGILSVGGNPC  198 (231)
T ss_dssp             EECHHHHHHHCTTCCSSEEEEECTTCSCBCCTTCTTCEEEETTEEEEEEEEECSST
T ss_pred             ecchhhhhhhhcCCCcCcEEeccCCCCCcccCCcCCCcEEECCEEEEEEEEeCCCC
Confidence             666777544321   1100   1222357889998887  788999999994444

>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*

Probab=99.83  E-value=1.2e-20  Score=119.74  Aligned_cols=125  Identities=19%  Similarity=0.267  Sum_probs=92.5

Q ss_pred             eEEeeeEEEeCCCCCCCCC-----------CCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCc
Q psy15292          2 FKLNTRQSFVHPQYSPSDF-----------RNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSL   70 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~-----------~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~   70 (132)
                      +.+.|.+++.||+|+....           .+|||||+|++++.++++++|+|||..... .+..++++|||.+......
T Consensus        64 ~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~-~~~~~~v~GwG~~~~~~~~  142 (237)
T 1ao5_A           64 QHRLVSKSFPHPGFNMSLLMLQTIPPGADFSDDLMLLRLSKPADITDVVKPIALPTKEPK-PGSKCLASGWGSITPTRWQ  142 (237)
T ss_dssp             EECCEEEEEECTTSCGGGGGCSSCCTTCCCTTCCEEEEESSCCCCCSSSCCCCCCCSCCC-TTCEEEEEESCCSSCC-CC
T ss_pred             EEEEEEEEEcCCCcCcccccccccccccCCCCCEEEEEeCCccccCCceeCCCcCCCCCC-CCCEEEEEECCccCCCCCC
Confidence            4567899999999987554           899999999999999999999999976643 7889999999987655333


Q ss_pred             ccccceeee---ccCCeEEEEeccce----eec---cCeeeeecCCCCCCC--CCceEEEEeecccCcC
Q psy15292         71 SSAIPTYVS---ISNDVALIKIDKDV----VFK---QHIIPVCLPDQTVKL--VGKSATVAGWGRTRHA  127 (132)
Q Consensus        71 ~~~~l~~~~---~~~d~c~~~~~~~~----~~~---~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~~  127 (132)
                      .+..|+++.   ++++.|...+...+    ...   ......|.++++.++  .|....|..||...+.
T Consensus       143 ~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~l~Gi~S~g~~~C~  211 (237)
T 1ao5_A          143 KPDDLQCVFITLLPNENCAKVYLQKVTDVMLCAGEMGGGKDTCRDDSGGPLICDGILQGTTSYGPVPCG  211 (237)
T ss_dssp             CCSBCEEEEEEEECHHHHHHHCSSCCCTTEEEEECTTCSCBCCTTCTTCEEEETTEEEEEEEECCSSTT
T ss_pred             CCCcccEEEEEecChhHhhhhhcccCCCCEEEEccCCCCCCCCCCCCcceEEECCEEeEEEeEcCCCCC
Confidence            456677655   66777765432211    111   122357888988887  7889999999954443

>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A

Probab=99.83  E-value=1.4e-20  Score=118.61  Aligned_cols=123  Identities=21%  Similarity=0.333  Sum_probs=93.9

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.++++||+|+.....||||||+|.+++.++++++|+|||...... .+..++++|||.+.... ..+..|+.+. 
T Consensus        68 ~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~-~~~~~l~~~~~  146 (227)
T 3fzz_A           68 QIIPVAKAIPHPDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPRRNAHVKPGDECYVAGWGKVTPDG-EFPKTLHEVKL  146 (227)
T ss_dssp             EEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSSTTS-CCCSBCEEEEE
T ss_pred             eEEEEEEEEECcCCCCCCCcCCEEEEEECCcCCCCCcccccCCCCcccCCCCCCEEEEEECCcccCCC-CCCCeeeEEEe
Confidence            46789999999999999999999999999999999999999999766533 78899999999876554 3456677655 


Q ss_pred             --ccCCeEEEEeccceeeccCe--------eeeecCCCCCCC--CCceEEEEeecccC
Q psy15292         80 --ISNDVALIKIDKDVVFKQHI--------IPVCLPDQTVKL--VGKSATVAGWGRTR  125 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~~~~~v--------~~icl~~~~~~~--~g~~~~v~gwg~~~  125 (132)
                        ++++.|...+...+.....+        ...|.++++.++  .+....|..||...
T Consensus       147 ~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~~l~Gi~S~g~~c  204 (227)
T 3fzz_A          147 TVQKDQVCESQFQSSYNRANEICVGDSKIKGASFEEDSGGPLVCKRAAAGIVSYGQTD  204 (227)
T ss_dssp             EBCCHHHHHHHHTTTCCTTTEEEECCCSSCBCCTTTTTTCEEEETTEEEEEEEECCTT
T ss_pred             eeecHHHhhhhhccccCCCceEEEeCCCCCCcccccCCccceEEecCCcEEEEECCCC
Confidence              66777765443322222222        236777888777  67888999999743

>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2

Probab=99.83  E-value=1.2e-20  Score=119.96  Aligned_cols=125  Identities=20%  Similarity=0.337  Sum_probs=82.3

Q ss_pred             eEEeeeEEEeCCCCCCC-----------CCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCc
Q psy15292          2 FKLNTRQSFVHPQYSPS-----------DFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSL   70 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~-----------~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~   70 (132)
                      +.+.|.++++||+|+..           .+.+|||||+|++++.++++++|+|||..... .+..++++|||.+......
T Consensus        67 ~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~-~~~~~~v~GwG~~~~~~~~  145 (240)
T 1sgf_A           67 QHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPK-LGSTCLASGWGSTTPIKFK  145 (240)
T ss_dssp             EEEEEEEEEECTTSCGGGC----CCTTCBCTTCCEEEEESSCCCCCSSCCCCCCCCSCCC-TTCEEEEC-------C---
T ss_pred             eEEEEEEEEcCCCCcccccccccccccCCCCCceEEEEeCCcCcCCCcccccCCCCCCCC-CCCEEEEEecCCCCCCCCC
Confidence            46789999999999865           67899999999999999999999999976643 7889999999987654333


Q ss_pred             ccccceeee---ccCCeEEEEeccc----eeec---cCeeeeecCCCCCCC--CCceEEEEeecccCcC
Q psy15292         71 SSAIPTYVS---ISNDVALIKIDKD----VVFK---QHIIPVCLPDQTVKL--VGKSATVAGWGRTRHA  127 (132)
Q Consensus        71 ~~~~l~~~~---~~~d~c~~~~~~~----~~~~---~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~~  127 (132)
                      .+..|+++.   ++++.|...+...    ....   ......|.++++.++  .|....|..||...+.
T Consensus       146 ~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~l~GI~S~g~~~C~  214 (240)
T 1sgf_A          146 YPDDLQCVNLKLLPNEDCDKAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLICDGILQGITSWGPEPCG  214 (240)
T ss_dssp             ------CEEEEEECTHHHHTTCSSBCCTTEEEEEECSSSEEECCCCTTCEEEETTEEEEEECCCCSSCC
T ss_pred             CCccccEEeeeEeCHHHhhhhhCCCcCCCeEeEccCCCCCCCCCCCCcCcEEEccEEEEEEEECCCCCC
Confidence            455666655   6777775433211    1111   122357899998888  7889999999954443

>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*

Probab=99.82  E-value=1.7e-20  Score=119.04  Aligned_cols=124  Identities=23%  Similarity=0.365  Sum_probs=92.6

Q ss_pred             eEEeeeEEEeCCCCCCCCC-----------CCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCc
Q psy15292          2 FKLNTRQSFVHPQYSPSDF-----------RNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSL   70 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~-----------~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~   70 (132)
                      +.+.|.++++||+|+....           .+|||||+|++++.+++.++|+|||..... .+..++++|||.+......
T Consensus        64 ~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~pi~Lp~~~~~-~~~~~~v~GwG~~~~~~~~  142 (237)
T 2zch_P           64 QVFQVSHSFPHPLYDMSLLKNRFLRPGDDSSHDLMLLRLSEPAELTDAVKVMDLPTQEPA-LGTTCYASGWGSIEPEEFL  142 (237)
T ss_dssp             EEEEEEEEEECTTSCGGGGTSSSCCTTCBCTTCCEEEEESSCCCCCSSCCCCCCCSSCCC-TTCEEEEEESCCSSSSSCC
T ss_pred             EEEEEEEEecCCCcchhhhcccccccCCCCCcceEEEEeCCCCccCCcEeeeECCCCCCC-CCCEEEEEeCCccCCCCCc
Confidence            4678999999999987544           789999999999999999999999986543 7889999999987665433


Q ss_pred             ccccceeee---ccCCeEEEEeccce----eec---cCeeeeecCCCCCCC--CCceEEEEeecccCc
Q psy15292         71 SSAIPTYVS---ISNDVALIKIDKDV----VFK---QHIIPVCLPDQTVKL--VGKSATVAGWGRTRH  126 (132)
Q Consensus        71 ~~~~l~~~~---~~~d~c~~~~~~~~----~~~---~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~  126 (132)
                      .+..|+++.   ++++.|...+...+    -..   ......|.++++.++  .+....|..||...+
T Consensus       143 ~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~l~Gi~S~g~~~C  210 (237)
T 2zch_P          143 TPKKLQCVDLHVISNDVCAQVHPQKVTKFMLCAGRWTGGKSTCSGDSGGPLVCNGVLQGITSWGSEPC  210 (237)
T ss_dssp             CCSBCEEEEEEEECHHHHHHHCSSBCCTTEEEEECTTCSCBCCTTCTTCEEESSSSEEEEEEECCSST
T ss_pred             CCcccEEeEEEEeCHHHhcccccCCCCceEEeecCCCCCCcccCCCccCeEEECCEEEEEEEeCcCCC
Confidence            356677655   77777764332211    110   112357888998887  788999999997433

>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...

Probab=99.82  E-value=3.1e-20  Score=116.79  Aligned_cols=122  Identities=20%  Similarity=0.422  Sum_probs=94.2

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      +.+.|.++++||+|+.....+|||||+|++++.+++.++|+|||..... .+..++++|||.+.......+..++.+.  
T Consensus        63 ~~~~v~~~~~hp~y~~~~~~~DIAll~L~~~~~~~~~v~pi~l~~~~~~-~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~  141 (223)
T 4i8h_A           63 QFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGNTKSSGTSYPDVLKCLKAP  141 (223)
T ss_dssp             EEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCSSCCC-TTCEEEEEESSCCCSSSCCCCSSCEEEEEE
T ss_pred             EEEEEeEEEECcCCCCCCCcCCEEEEEECCcCcCCCceeceECCCCCCC-CCCEEEEEecccccCCCCCccccceEEEee
Confidence            4578999999999999999999999999999999999999999977643 7889999999988765444456677655  


Q ss_pred             -ccCCeEEEEecccee----e---ccCeeeeecCCCCCCC--CCceEEEEeeccc
Q psy15292         80 -ISNDVALIKIDKDVV----F---KQHIIPVCLPDQTVKL--VGKSATVAGWGRT  124 (132)
Q Consensus        80 -~~~d~c~~~~~~~~~----~---~~~v~~icl~~~~~~~--~g~~~~v~gwg~~  124 (132)
                       ++++.|...+...+.    .   .......|.++++.++  .+....|..||..
T Consensus       142 ~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~l~Gi~S~g~~  196 (223)
T 4i8h_A          142 ILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGSG  196 (223)
T ss_dssp             BCCHHHHHHHSTTTCCTTEEEESCTTSSCBCCTTCTTCEEEETTEEEEEEEECSS
T ss_pred             ecCHHHHHHhhCCCCCCCeEeccCCCCCCccCCCCCCCcEEECCEEEEEEEcCCC
Confidence             667777654432110    0   1222357888988877  7888999999964

>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A

Probab=99.82  E-value=4.7e-20  Score=117.19  Aligned_cols=122  Identities=20%  Similarity=0.263  Sum_probs=92.1

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      +.+.|.+++.||+|+.....||||||+|++++.++++++|+|||.......+..++++|||.+.......+..|+++.  
T Consensus        71 ~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~  150 (240)
T 1mza_A           71 QTLEIKKFIPFSRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDSLRPSDTLREVTVT  150 (240)
T ss_dssp             EEEEEEEEEECCCSSCSSSSSCCEEEEESSCCCCBTTBCCCCBCSSCCCCTTCEEEEEECCCSSTTCSSCCSBCEEEEEE
T ss_pred             EEEEEEEEEeCCCccCCCCCceEEEEEeCCCcccCCceeeeecCCcccCCCCCEEEEEeCCcCCCCCCCccccceEeEEE
Confidence            567899999999999988999999999999999999999999997433347889999999988765433456677665  


Q ss_pred             -ccCCeEE--EEeccc-eeecc--------CeeeeecCCCCCCC--CCceEEEEeecc
Q psy15292         80 -ISNDVAL--IKIDKD-VVFKQ--------HIIPVCLPDQTVKL--VGKSATVAGWGR  123 (132)
Q Consensus        80 -~~~d~c~--~~~~~~-~~~~~--------~v~~icl~~~~~~~--~g~~~~v~gwg~  123 (132)
                       ++++.|.  ..+... .....        .....|.++++.++  .|....|..||.
T Consensus       151 i~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGGPL~~~~~l~Gi~S~g~  208 (240)
T 1mza_A          151 VLSRKLCNSQSYYNGDPFITKDMVCAGDAKGQKDSCKGDAGGPLICKGVFHAIVSGGH  208 (240)
T ss_dssp             ECCHHHHTSTTTTTTTTCCCTTEEEEECTTSCCCCCTTCTTCEEEETTEEEEEECSSC
T ss_pred             EeCHHHcCCcceeCCCCcCCCCeEeecCCCCCCccCCCCCCCeeEECCEEEEEEEECC
Confidence             6777775  222110 01111        22357888888887  788899999996

>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2

Probab=99.82  E-value=2.3e-20  Score=117.40  Aligned_cols=122  Identities=19%  Similarity=0.310  Sum_probs=91.5

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      +.+.|.++++||+|+.....||||||+|++++.|+++++|+|||.......+..++++|||.+..... .+..|+++.  
T Consensus        66 ~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picL~~~~~~~~~~~~~v~GwG~~~~~~~-~~~~L~~~~~~  144 (222)
T 1eq9_A           66 DVYDVEDAVVNKNYDDFLLRNDVALVHLTNPIKFNDLVQPIKLSTNDEDLESNPCTLTGWGSTRLGGN-TPNALQEIELI  144 (222)
T ss_dssp             EEEEEEEEEECTTCBTTTTBCCCEEEEESSCCCCBTTBCCCEECSCCTTCTTSEEEEEECCCSSTTCC-CCSBCEEEEEE
T ss_pred             eEEEEEEEEECCCCCCCCCCCCEEEEEECCccccCCceEccCCCCCCcCCCCCEEEEEcccccCCCCc-ccchheEeEEE
Confidence            46789999999999998899999999999999999999999999766534788899999998765432 355677655  


Q ss_pred             -ccCCeEE-EEec--cceeec--cCeeeeecCCCCCCC--CCceEEEEeeccc
Q psy15292         80 -ISNDVAL-IKID--KDVVFK--QHIIPVCLPDQTVKL--VGKSATVAGWGRT  124 (132)
Q Consensus        80 -~~~d~c~-~~~~--~~~~~~--~~v~~icl~~~~~~~--~g~~~~v~gwg~~  124 (132)
                       ++++.|. ..+.  ......  ..-...|.++++.++  .|....|..||..
T Consensus       145 ~~~~~~C~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~l~GI~S~g~~  197 (222)
T 1eq9_A          145 VHPQKQCERDQWRVIDSHICTLTKRGEGACHGDSGGPLVANGAQIGIVSFGSP  197 (222)
T ss_dssp             EECHHHHHHHSSSCCTTEEEECCCTTCBCCTTCTTCEEEETTEEEEEEEECST
T ss_pred             EeCHHHhCcccCCCCccEEeecCCCCCeeeeCCccceEEECCEEEEEEEECCC
Confidence             6666775 2211  111110  112347889998887  7888999999963

>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A

Probab=99.82  E-value=3.4e-20  Score=116.97  Aligned_cols=125  Identities=18%  Similarity=0.244  Sum_probs=92.1

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCc-ccCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK-LVGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~-~~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.++++||+|+.....+|||||+|++++.+++.++|+|||..... ..+..++++|||.+..... .+..|+.+. 
T Consensus        68 ~~~~v~~i~~hp~y~~~~~~~DIAll~L~~~~~~~~~v~pi~l~~~~~~~~~g~~~~v~GwG~~~~~~~-~~~~l~~~~~  146 (228)
T 2xw9_A           68 RLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGR-RPDSLQHVLL  146 (228)
T ss_dssp             EEEEEEEEEECTTCCTTCCTTCCEEEEESSCCCCBTTBCCCCBCCSCCCCCTTC-CEEEESSCCSTTCC-CCSBCEEEEC
T ss_pred             eEEEEEEEEeCCCCCCCCCCCcEEEEEeCCCcccCCCeeecccCCcccCCCCCCEEEEEEecccCCCCC-CCchheEEEE
Confidence            4678999999999999899999999999999999999999999975432 3688899999998765433 356677655 


Q ss_pred             --ccCCeEEEEeccceeec-cCe------eeeecCCCCCCC--CCceEEEEeecccCcC
Q psy15292         80 --ISNDVALIKIDKDVVFK-QHI------IPVCLPDQTVKL--VGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~~~-~~v------~~icl~~~~~~~--~g~~~~v~gwg~~~~~  127 (132)
                        ++++.|...+.....+. ..+      ...|.++++.++  .+....|..||...+.
T Consensus       147 ~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~GDsGgPL~~~~~l~Gi~s~g~~~C~  205 (228)
T 2xw9_A          147 PVLDRATCNRRTHHDGAITERLMCAESNRRDSCKGDAGGPLVCGGVLEGVVTSGSRVCG  205 (228)
T ss_dssp             CEECHHHHTSTTTTTTCCCTTEEEECCSSCBCCTTCTTCEEEETTEEEEEECCSCCCSS
T ss_pred             EEcChhHhcCccccCCcccCCEEecCCCCCccCCCCCcccEEECCEEEEEEeecCCcCC
Confidence              66677754332111111 112      347888988877  6888899999974443

>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2

Probab=99.82  E-value=5.6e-20  Score=115.97  Aligned_cols=119  Identities=22%  Similarity=0.362  Sum_probs=89.4

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCc-ccCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK-LVGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~-~~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.++++||+|+...+.||||||+|.+++.++++++|+|||..... ..+..++++|||.+.... ..+..|+.+. 
T Consensus        67 ~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~-~~~~~L~~~~~  145 (227)
T 1euf_A           67 QVIPVRRPIPHPDYNDETLANDIMLLKLTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLGVNM-PSTDKLQEVDL  145 (227)
T ss_dssp             EEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEESCBSSTTC-CBCSBCEEEEE
T ss_pred             EEEEEEEEEeCCCCCCCCCcCceEEEEECCcCcCCCceeccCCCCccccCCCCCEEEEEEEccCCCCC-CCchhheEeEe
Confidence            5678999999999999899999999999999999999999999976543 378899999999876543 2356677665 


Q ss_pred             --ccCCeEEEEeccceeeccCee--------eeecCCCCCCC--CCceEEEEeec
Q psy15292         80 --ISNDVALIKIDKDVVFKQHII--------PVCLPDQTVKL--VGKSATVAGWG  122 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~~~~~v~--------~icl~~~~~~~--~g~~~~v~gwg  122 (132)
                        ++++.|...+...+ ....+|        ..|.++++.++  .+....|..||
T Consensus       146 ~i~~~~~C~~~~~~~~-~~~~~Ca~~~~~~~~~~~GDsGgPL~~~~~l~Gi~S~g  199 (227)
T 1euf_A          146 EVQSEEKCIARFKNYI-PFTQICAGDPSKRKNSFSGDSGGPLVCNGVAQGIVSYG  199 (227)
T ss_dssp             EBCCTHHHHTTCTTCC-TTTEEEESCTTSCCBCCTTCTTCEEEETTEEEEEEEEC
T ss_pred             ccccHHHhhHhhcCcC-CCcEEEccCCCCCCcccccCCCCceEECCEEEEEEEEe
Confidence              77778865443211 111122        23456677666  67788999999

>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}

Probab=99.82  E-value=4.9e-20  Score=116.94  Aligned_cols=125  Identities=21%  Similarity=0.340  Sum_probs=93.2

Q ss_pred             eEEeeeEEEeCCCCC-----------CCCCCCceEEEEeCCCee-eCCCeeeeeecCCCCcccCCcEEEeccCccccCCC
Q psy15292          2 FKLNTRQSFVHPQYS-----------PSDFRNDVALIKIDKDVV-FKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS   69 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~-----------~~~~~~diall~l~~~~~-~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~   69 (132)
                      +.+.|.++++||+|+           ...+.+|||||+|.+|+. +++.++|+|||..... .+..++++|||.+.....
T Consensus        64 ~~~~v~~~~~hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~~v~pi~L~~~~~~-~~~~~~v~GwG~~~~~~~  142 (238)
T 1spj_A           64 QFVHVSESFPHPGFNMSLLENHTRQADEDYSHDLMLLRLTEPADTITDAVKVVELPTEEPE-VGSTCLASGWGSIEPENF  142 (238)
T ss_dssp             EEECEEEEEECTTSCGGGGCC--CTTTCCCTTCCEEEEESSCCCCSSTTCCCCCCCSSCCC-TTCEEEEEESSCSSSSSC
T ss_pred             eEEEEEEEEcCCCccccccccccccccccCCCCeEEEEECccccccCCceeeccCCCCCCC-CCCEEEEEecCCCCCCCC
Confidence            457899999999998           456789999999999998 9999999999976653 688999999998776543


Q ss_pred             cccccceeee---ccCCeEEEEeccce----eec---cCeeeeecCCCCCCC--CCceEEEEeecccCcC
Q psy15292         70 LSSAIPTYVS---ISNDVALIKIDKDV----VFK---QHIIPVCLPDQTVKL--VGKSATVAGWGRTRHA  127 (132)
Q Consensus        70 ~~~~~l~~~~---~~~d~c~~~~~~~~----~~~---~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~~  127 (132)
                      ..+..|+.+.   ++++.|...+...+    -..   ......|.++++.++  .+....|..||...+.
T Consensus       143 ~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~l~Gi~S~g~~~C~  212 (238)
T 1spj_A          143 SFPDDLQCVDLKILPNDECKKAHVQKVTDFMLCVGHLEGGKDTCVGDSGGPLMCDGVLQGVTSWGYVPCG  212 (238)
T ss_dssp             CCCSBCEEEEEEEECHHHHHHHCSSCCCTTEEEEECTTCSSBCCTTCTTCEEEETTEEEEEEEECCSSTT
T ss_pred             CCcCcccEEEEeecCHHHhhhhccCCCCCCeEEeeCCCCCCCCCCCCCCCcEEEcCEEEEEEEeCCCCCC
Confidence            4456677655   67777765432211    111   122357888998887  7888999999954443

>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2

Probab=99.82  E-value=1.1e-20  Score=119.09  Aligned_cols=121  Identities=23%  Similarity=0.289  Sum_probs=92.1

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      +.+.|.++++||+|+...+.+|||||+|++++.++++++|+|||.... ..+..++++|||.+.......+..|+.+.  
T Consensus        66 ~~~~v~~i~~hp~y~~~~~~~DiALl~L~~~~~~~~~v~picL~~~~~-~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~  144 (226)
T 1azz_A           66 VTIQSTDFTVHENYNSFVISNDIAVIRLPVPVTLTAAIATVGLPSTDV-GVGTVVTPTGWGLPSDSALGISDVLRQVDVP  144 (226)
T ss_dssp             EEEEECCEEECTTCBTTTTBSCCEEEECSSCCCCCSSSCCCBCCSSCC-CTTCEEEEEESSCSSTTCSSSCSBCEECCEE
T ss_pred             EEEEEEEEEECCCCCCCCCCCceEEEEECCccccCCCcccccCCCCCC-CCCCEEEEEeCCccCCCCCCCCchhEEeeEE
Confidence            457889999999999988999999999999999999999999997664 47889999999987654433456677655  


Q ss_pred             -ccCCeEEEEec---cceeec--cCeeeeecCCCCCCC--CCceEEEEeecc
Q psy15292         80 -ISNDVALIKID---KDVVFK--QHIIPVCLPDQTVKL--VGKSATVAGWGR  123 (132)
Q Consensus        80 -~~~d~c~~~~~---~~~~~~--~~v~~icl~~~~~~~--~g~~~~v~gwg~  123 (132)
                       ++++.|...+.   ......  ..-...|.++++.++  .+....|..||.
T Consensus       145 i~~~~~C~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~l~Gi~S~g~  196 (226)
T 1azz_A          145 IMSNADCDAVYGIVTDGNICIDSTGGKGTCNGDSGGPLNYNGLTYGITSFGA  196 (226)
T ss_dssp             EECHHHHHHHHSCCCTTEEEECCTTTCBCCTTCTTCEEEETTEEEEEEEEEE
T ss_pred             EEChhHhhhhhCcCCCceEeecCCCCCccCCCCCCcceEECCEEEEEEEEEC
Confidence             66677754332   111110  112357889998887  688899999996

>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A

Probab=99.82  E-value=5.2e-20  Score=116.62  Aligned_cols=121  Identities=23%  Similarity=0.334  Sum_probs=91.3

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCc-ccCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK-LVGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~-~~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.++++||+|+.....+|||||+|.+++.++++++|+|||..... ..+..++++|||.+..... .+..|+++. 
T Consensus        65 ~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~-~~~~L~~~~~  143 (234)
T 1orf_A           65 QIMLVKKEFPYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHNSAS-WSDTLREVEI  143 (234)
T ss_dssp             EEECEEEEEECTTCCTTTCTTCCEEEEESSCCCCSSSSCCCCCCSSCCCCCTTCEEEEEESSCSSSSSC-CCSBCEEEEE
T ss_pred             EEEEEEEEEcCCCCCCCCCCCCEEEEEECCcCccCCCeeeeecCCCcCCCCCCCEEEEEECCcCCCCCC-ccccceEeEE
Confidence            5678999999999999899999999999999999999999999976543 3788999999998765432 355677655 


Q ss_pred             --ccCCeEEE--Eec--c----ceee-c--cCeeeeecCCCCCCC--CCceEEEEeecc
Q psy15292         80 --ISNDVALI--KID--K----DVVF-K--QHIIPVCLPDQTVKL--VGKSATVAGWGR  123 (132)
Q Consensus        80 --~~~d~c~~--~~~--~----~~~~-~--~~v~~icl~~~~~~~--~g~~~~v~gwg~  123 (132)
                        ++++.|..  .+.  .    .... .  ..-...|.++++.++  .|....|..||.
T Consensus       144 ~~~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~l~GI~S~g~  202 (234)
T 1orf_A          144 TIIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSCNGDSGSPLLCEGVFRGVTSFGL  202 (234)
T ss_dssp             EEECHHHHTSTTTTTTTTCCCTTEEEEECSSCCCBCCTTCTTCEEEETTEEEEEEEECC
T ss_pred             EeeCHHHcCCccccccCCccCCCEEEecCCCCCCcCCCCCCCCeEEECCEEEEEEEEcC
Confidence              66777752  111  0    1111 1  122357888998887  788899999996

>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...

Probab=99.81  E-value=2.3e-20  Score=119.01  Aligned_cols=122  Identities=24%  Similarity=0.446  Sum_probs=90.6

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.+++.||+|+.....||||||+|++++.|+++++|+|||...... .+..++++|||.+.......+..|+++. 
T Consensus        81 ~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~  160 (245)
T 1t8o_A           81 QKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYTNANTPDRLQQASL  160 (245)
T ss_dssp             EEEEEEEEEECTTCCTTTCCSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSCC--CCCCSBCEEEEE
T ss_pred             EEEEEEEEEeCCCCCCCCCCCCEEEEEECCCCcCCCceeeeECCCCccCCCCCCEEEEEEeCCCCCCCCCCcchheEEEE
Confidence            56789999999999998999999999999999999999999999765433 6889999999987665443456677655 


Q ss_pred             --ccCCeEEEEeccceeeccCe------eeeecCCCCCCC--CC----ceEEEEeeccc
Q psy15292         80 --ISNDVALIKIDKDVVFKQHI------IPVCLPDQTVKL--VG----KSATVAGWGRT  124 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~~~~~v------~~icl~~~~~~~--~g----~~~~v~gwg~~  124 (132)
                        ++++.|...+...+ ....+      ...|.++++.++  .+    ....|..||..
T Consensus       161 ~~~~~~~C~~~~~~~~-~~~~~Ca~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~  218 (245)
T 1t8o_A          161 PLLSNTNCKKYWGTKI-KDAMICAGASGVSSCMGDSGGPLVCKKNGAWTLVGIVSWGSS  218 (245)
T ss_dssp             EEECHHHHHHHHGGGC-CTTEEEEECSSCBCCTTCTTCEEEEEETTEEEEEEEEEECCT
T ss_pred             eeEcchhhhHhhcCcC-CCceEEccCCCCccCcccCcCCEEEEECCEEEEEEEEEeCCC
Confidence              66777765432211 11222      246888888777  22    57888999864

>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*

Probab=99.81  E-value=1.4e-19  Score=115.63  Aligned_cols=123  Identities=19%  Similarity=0.320  Sum_probs=90.2

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCC----eeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccce
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKD----VVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPT   76 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~----~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~   76 (132)
                      +.+.|.++++||+|+...+.||||||+|+++    +.+++.++|+|||...... .+..++++|||.+.......+..|+
T Consensus        75 ~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~  154 (252)
T 1rtf_B           75 QKFEVEKYIVHKEFDDDTYDNDIALLQLKSDSSRCAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSPFYSERLK  154 (252)
T ss_dssp             EEEEEEEEEECTTCCTTTCTTCCEEEEECCSSSCCSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCE
T ss_pred             eEEEEEEEEeCCCCCcCCCCCCEEEEEECCccccccccCCceeceeCCCccccCCCCCEEEEEEcCCCCCCCccccchhe
Confidence            4678999999999999899999999999999    8899999999999765433 6788999999987655433456677


Q ss_pred             eee---ccCCeEEEEeccceee-ccCe--------------eeeecCCCCCCC----CC--ceEEEEeeccc
Q psy15292         77 YVS---ISNDVALIKIDKDVVF-KQHI--------------IPVCLPDQTVKL----VG--KSATVAGWGRT  124 (132)
Q Consensus        77 ~~~---~~~d~c~~~~~~~~~~-~~~v--------------~~icl~~~~~~~----~g--~~~~v~gwg~~  124 (132)
                      ++.   ++++.|...+...... ...+              ...|.++++.++    .|  ....|..||..
T Consensus       155 ~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~~~~~~~C~GDsGgPL~~~~~~~~~l~Gi~S~g~~  226 (252)
T 1rtf_B          155 EAHVRLYPSSRCTSQHLLNRTVTDNMLCAGDTRSGGPQANLHDACQGDSGGPLVCLNDGRMTLVGIISWGLG  226 (252)
T ss_dssp             EEEEEECCGGGSSTTTTTTCCCCTTEEEEECCC------CCCBCCTTCTTCEEEEEETTEEEEEEEEEECSS
T ss_pred             EeeeEEecHHHhhhhhccCCCCCCCEEEecCCCCCCccCCCCccccCCCcCceEEEeCCcEEEEEEEEEcCC
Confidence            655   7777776432111111 1112              347888888776    23  47788999863

>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A

Probab=99.81  E-value=6.6e-20  Score=116.56  Aligned_cols=123  Identities=21%  Similarity=0.349  Sum_probs=90.6

Q ss_pred             eEEeeeEEEeCCCCCCCC-CCCceEEEEeCCCeeeCCCeeeeeecCCCCc-ccCCcEEEeccCccccCCCcccccceeee
Q psy15292          2 FKLNTRQSFVHPQYSPSD-FRNDVALIKIDKDVVFKQHIIPVCLPDQTVK-LVGKSATVAGWGRTRHASSLSSAIPTYVS   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~-~~~diall~l~~~~~~~~~~~~~cl~~~~~~-~~g~~~~~~GwG~~~~~~~~~~~~l~~~~   79 (132)
                      +.+.|.++++||+|+... +.||||||+|++++.++++++|+|||..... ..+..++++|||.+.... ..+..|+.+.
T Consensus        64 ~~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~-~~~~~L~~~~  142 (240)
T 2zgc_A           64 LTFHIKAAIQHPRYKPVPALENDLALLQLDGKVKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLTHQGG-RLSRVLRELD  142 (240)
T ss_dssp             EEEEEEEEEECTTCBCTTSCBSCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEECCBSSTTC-CBCSBCEEEE
T ss_pred             eEEEEEEEEECCCCCCCCCCcccEEEEEeCCcccCCCceeeeEcCCCCCCCCCCCEEEEEECCcccCCC-CcCceeeeee
Confidence            467899999999999876 8999999999999999999999999976543 368899999999876543 3456677655


Q ss_pred             ---ccCCeEEE--EeccceeeccCe--------eeeecCCCCCCC--CC--ceEEEEeecccCc
Q psy15292         80 ---ISNDVALI--KIDKDVVFKQHI--------IPVCLPDQTVKL--VG--KSATVAGWGRTRH  126 (132)
Q Consensus        80 ---~~~d~c~~--~~~~~~~~~~~v--------~~icl~~~~~~~--~g--~~~~v~gwg~~~~  126 (132)
                         ++++.|..  .+...+ ....+        ...|.++++.++  .+  ....|..||...+
T Consensus       143 ~~~~~~~~C~~~~~~~~~~-~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~l~Gi~S~g~~~C  205 (240)
T 2zgc_A          143 LQVLDTRMCNNSRFWNGSL-SPSMVCLAADSKDQAPCKGDSGGPLVCGKGRVLAGVLSFSSRVC  205 (240)
T ss_dssp             EEECCHHHHTSTTTTTTCC-CTTEEEEECSSTTCBCCTTCTTCEEEETTTTEEEEEECCCCSST
T ss_pred             eeecCHHHhCCccccCCCC-CCceEeeccCCCCCccCCCCccCeeEECCCCEEEEEEEECCCCC
Confidence               66677754  221111 11112        346888888877  45  7889999995443

>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2

Probab=99.81  E-value=3.2e-20  Score=117.78  Aligned_cols=122  Identities=21%  Similarity=0.352  Sum_probs=92.8

Q ss_pred             eEEeeeEEEeCCCCCCCCC-----------CCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCc
Q psy15292          2 FKLNTRQSFVHPQYSPSDF-----------RNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSL   70 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~-----------~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~   70 (132)
                      +.+.|.++++||+|+....           .+|||||+|++++.++++++|+|||..... .+..++++|||.+......
T Consensus        64 ~~~~v~~~~~hp~y~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~-~~~~~~v~GwG~~~~~~~~  142 (237)
T 1gvz_A           64 QFHQVSDSFLDPQFDLSLLKKKYLRPYDDISHDLMLLRLAQPARITDAVKILDLPTQEPK-LGSTCYTSGWGLISTFTNR  142 (237)
T ss_dssp             EEECEEEEEECTTSCGGGGGCSSCCTTSCCTTCCEEEEESSCCCCBTTBCCCCCCSSCCC-TTCEEEEEEEECSCTTTCS
T ss_pred             eEEEeeeEecCCccCcccccccccccccccCCceEEEEeCCCcccCCcEeeeECCCCCCC-CCCEEEEECCCcccCCCCC
Confidence            4678999999999987665           899999999999999999999999976643 7889999999987543333


Q ss_pred             ccccceeee---ccCCeEEEEeccce----eec---cCeeeeecCCCCCCC--CCceEEEEeeccc
Q psy15292         71 SSAIPTYVS---ISNDVALIKIDKDV----VFK---QHIIPVCLPDQTVKL--VGKSATVAGWGRT  124 (132)
Q Consensus        71 ~~~~l~~~~---~~~d~c~~~~~~~~----~~~---~~v~~icl~~~~~~~--~g~~~~v~gwg~~  124 (132)
                      .+..|+.+.   ++++.|...+...+    ...   ..-...|.++++.++  .|....|..||..
T Consensus       143 ~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~l~GI~S~g~~  208 (237)
T 1gvz_A          143 GSGTLQCVELRLQSNEKCARAYPEKMTEFVLCATHRDDSGSICLGDSGGALICDGVFQGITSWGYS  208 (237)
T ss_dssp             EEEEEEEEEEEEECGGGGCSSCGGGCCTTEEEEECSSTTCEECGGGTTCEEEETTEEEEEECCCSS
T ss_pred             CCCccEEEEEeEeChhHhhhhhhhcCCCceEEEeeCCCCCccCCCCccCcEeeCCEEEEEEEeCCC
Confidence            466677665   77888876553211    111   112347889998887  7888999999963

>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}

Probab=99.81  E-value=1.1e-19  Score=115.25  Aligned_cols=123  Identities=22%  Similarity=0.378  Sum_probs=93.1

Q ss_pred             EeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee---c
Q psy15292          4 LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS---I   80 (132)
Q Consensus         4 ~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~---~   80 (132)
                      ..+..++.||+|+...+.||||||+|++++.++++++|+|||..... .+..++++|||.+.......+..++.+.   +
T Consensus        69 ~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~~~v~pi~l~~~~~~-~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~  147 (238)
T 4e7n_A           69 VPKEKFFCLSSKNYTLWDKDIMLIRLDSPVKNSKHIAPFSLPSSPPS-VGSVCRIMGWGRISPTEGTYPDVPHCVNINLL  147 (238)
T ss_dssp             CEEEEECSSTTCCCCSSSCCCEEEEESSCCCCBTTBCCCCCCSSCCC-TTCEEEEEESSCSSSSSCCCCSSCEEEEEEEE
T ss_pred             eeeeeEEcCCCCCCCCCCCcEEEEEeCCCccCCCceeeeeCCCCCCC-CCCEEEEEECCCCCCCCCCCCccceEeecccc
Confidence            45667778999999999999999999999999999999999977654 6889999999987765444566677655   7


Q ss_pred             cCCeEEEEeccc-eee-c--------cCeeeeecCCCCCCC--CCceEEEEeecccCcC
Q psy15292         81 SNDVALIKIDKD-VVF-K--------QHIIPVCLPDQTVKL--VGKSATVAGWGRTRHA  127 (132)
Q Consensus        81 ~~d~c~~~~~~~-~~~-~--------~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~~  127 (132)
                      +++.|...+... ... .        ..-...|.++++.++  .+....|..||...+.
T Consensus       148 ~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~l~Gi~S~g~~~C~  206 (238)
T 4e7n_A          148 EYEMCRAPYPEFELPATSRTLCAGILEGGKDTCKGDSGGPLICNGQFQGIASWGDDPCA  206 (238)
T ss_dssp             CGGGGTTTCGGGCCCSCCSEEEEECTTCSCBCCTTCTTCEEEETTEEEEEEEECCSSTT
T ss_pred             CHHHHhhhcccccCCCCCCeEEeCCCCCCCccCCCCCCcceEECCEEEEEEEEeCCCCC
Confidence            778886544321 111 1        122347888998887  7889999999965343

>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*

Probab=99.81  E-value=5.5e-20  Score=119.86  Aligned_cols=123  Identities=25%  Similarity=0.338  Sum_probs=89.5

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCc--ccCCcEEEeccCccccCCCcccccceeee
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK--LVGKSATVAGWGRTRHASSLSSAIPTYVS   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~--~~g~~~~~~GwG~~~~~~~~~~~~l~~~~   79 (132)
                      +.+.|.++++||+|+...+.||||||+|++++.|+++++|+|||.....  ..+..|+++|||.+..........|+++.
T Consensus        80 ~~~~V~~i~~Hp~y~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~~~~~v~GWG~~~~~~~~~~~~L~~~~  159 (290)
T 1fiw_A           80 QERYVEKIIIHEKYSASSEANDIALMKITPPVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENARRTSPMLQEAR  159 (290)
T ss_dssp             EEEEEEEEEECTTCBTTTTBTCCEEEEEESCCCCBTTBCCCBCCCTTCCSCCSSCEEEEEESCCSSTTCSSCCSBCEEEE
T ss_pred             eEEEEEEEEECCCCCCCCCCCCEEEEEECCccccCCccccccCCCccccCcCCCCeEEEEEeccCCCCCCCCCceeeEEE
Confidence            5678999999999999889999999999999999999999999965432  25788999999988765443455677665


Q ss_pred             ---ccCCeEEEEe------ccceee---ccCeeeeecCCCCCCC--CC------ceEEEEeeccc
Q psy15292         80 ---ISNDVALIKI------DKDVVF---KQHIIPVCLPDQTVKL--VG------KSATVAGWGRT  124 (132)
Q Consensus        80 ---~~~d~c~~~~------~~~~~~---~~~v~~icl~~~~~~~--~g------~~~~v~gwg~~  124 (132)
                         ++++.|....      ......   .......|.++++.++  .+      ...+|..||..
T Consensus       160 v~i~~~~~C~~~~~~~~~i~~~~iCag~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~  224 (290)
T 1fiw_A          160 VDLIDLGLCNSTRWYNGRIRSTNVCAGYPEGKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGVG  224 (290)
T ss_dssp             EEEECHHHHTSTTTTTTCCCTTEEEEECTTCSSBCCTTCTTCEEEEECSSSSCEEEEEEEEECSS
T ss_pred             EEEecHHHhccccccCCcCCCCEEEEecCCCCCeeCCCCCchheEEEECCCCCEEEEEEEEECCC
Confidence               6777775321      111111   1112347888888777  33      37889999953

>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...

Probab=99.81  E-value=2.8e-20  Score=118.10  Aligned_cols=122  Identities=17%  Similarity=0.327  Sum_probs=89.9

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCc-ccCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK-LVGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~-~~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.++++||+|+.....+|||||+|++++.++++++|+|||..... ..+..|+++|||.+..... .+..|+.+. 
T Consensus        72 ~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~-~~~~L~~~~~  150 (238)
T 3bg8_A           72 SFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPISLPSKGERNVIYTDCWVTGWGYRKLRDK-IQNTLQKAKI  150 (238)
T ss_dssp             CCEEEEEEEECTTCCCGGGSCCCEEEEESSCCCCBTTBCCCBCCCGGGGSSCCCCEEEEESCCSSSSCC-CCSBCEEEEC
T ss_pred             eEEeeEEEEECCCCCCCCCCCcEEEEEECCccccCCCcccCCCCCCccCcCCCCeEEEEecCCCCCCCC-hhhhhcEeeE
Confidence            3567999999999998888999999999999999999999999976532 2678899999998765543 356677665 


Q ss_pred             --ccCCeEEEEeccceeecc--------CeeeeecCCCCCCC--C--C--ceEEEEeeccc
Q psy15292         80 --ISNDVALIKIDKDVVFKQ--------HIIPVCLPDQTVKL--V--G--KSATVAGWGRT  124 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~~~~--------~v~~icl~~~~~~~--~--g--~~~~v~gwg~~  124 (132)
                        ++++.|...+........        .....|.++++.++  .  |  ....|..||..
T Consensus       151 ~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~  211 (238)
T 3bg8_A          151 PLVTNEECQKRYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEG  211 (238)
T ss_dssp             CEECHHHHHHHCTTSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSS
T ss_pred             EEECHHHhhhhhcCCCCCCCeEeecCCCCCCCcCCCCCCcceEEEECCeEEEEEEEEECCC
Confidence              677778654432111111        12347888888777  2  2  36888999863

>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*

Probab=99.81  E-value=8.6e-20  Score=115.47  Aligned_cols=123  Identities=19%  Similarity=0.286  Sum_probs=91.6

Q ss_pred             EeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee---c
Q psy15292          4 LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS---I   80 (132)
Q Consensus         4 ~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~---~   80 (132)
                      ..+..++.||+|+...+.||||||+|++++.++++++|+|||..... .+..++++|||.+..........++...   +
T Consensus        67 ~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~~~v~pi~l~~~~~~-~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~  145 (234)
T 3s69_A           67 NPKEKFICPNKKNDEVLDKDIMLIKLDSRVSNSEHIVPLSLPSSPPS-VGSVCHIMGWGSITPIKVTYPDVPYCAYINLL  145 (234)
T ss_dssp             CEEEEEECTTCCTTCTTSSCCEEEEESSCCCCBTTBCCCCCCSSCCC-TTCEEEEEESSCSSSSSCCCCSSCEEEEEEEE
T ss_pred             eceEEEECCCccCCCCCcccEEEEeeCCcCCCCCcceeeecCCCCCC-CCCEEEEEECCCCCCCCcCcccccceeEEeec
Confidence            34566777999999999999999999999999999999999987654 6889999999987665434455666554   6


Q ss_pred             cCCeEEEEeccceeec--------cCeeeeecCCCCCCC--CCceEEEEeecccCcC
Q psy15292         81 SNDVALIKIDKDVVFK--------QHIIPVCLPDQTVKL--VGKSATVAGWGRTRHA  127 (132)
Q Consensus        81 ~~d~c~~~~~~~~~~~--------~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~~  127 (132)
                      +++.|...+.......        ......|.++++.++  .+....|..||...+.
T Consensus       146 ~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~l~Gi~S~g~~~C~  202 (234)
T 3s69_A          146 DDAVCQAGYPELLTEYRTLCAGILEGGKDTCGGDSGGPLICNGQFQGIVSFGAHPCG  202 (234)
T ss_dssp             CHHHHHHHCTTCCTTSCEEEEECTTCSCBCCTTCTTCEEEETTEEEEEEEECCSSTT
T ss_pred             CHHHHhhhcccccCCcceEeccCCCCCCccCCCCCccceEEcCEEEEEEEEcccccC
Confidence            6677765443211111        223357888998887  7889999999965343

>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*

Probab=99.81  E-value=4.5e-20  Score=117.57  Aligned_cols=123  Identities=24%  Similarity=0.381  Sum_probs=89.4

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCc-ccccceeee
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSL-SSAIPTYVS   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~-~~~~l~~~~   79 (132)
                      +.+.|.++++||+|+.....||||||+|++++.|+++++|+|||...... .+..|+++|||.+...... .+..|+.+.
T Consensus        70 ~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~L~~~~  149 (245)
T 2f9n_A           70 QLLPVSRIIVHPQFYIIQTGADIALLELEEPVNISSRVHTVMLPPASETFPPGMPCWVTGWGDVDNDEPLPPPFPLKQVK  149 (245)
T ss_dssp             CCBCEEEEEECTTCCSSCCTTCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCCEEEEESCCSBTTBCCCTTCBCEEEE
T ss_pred             eEEEEEEEEECCCccCCCCCCcEEEEEeCCCCcCCCCccccCCCCcccCCCCCCEEEEEEeCCCCCCCCCCccccceEEE
Confidence            35679999999999998899999999999999999999999999765433 6889999999987654332 134577655


Q ss_pred             ---ccCCeEEEEeccc--------eeeccCee------eeecCCCCCCC----CC--ceEEEEeeccc
Q psy15292         80 ---ISNDVALIKIDKD--------VVFKQHII------PVCLPDQTVKL----VG--KSATVAGWGRT  124 (132)
Q Consensus        80 ---~~~d~c~~~~~~~--------~~~~~~v~------~icl~~~~~~~----~g--~~~~v~gwg~~  124 (132)
                         ++++.|...+...        ......+|      ..|.++++.++    .|  ....|..||..
T Consensus       150 ~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~Ca~~~~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~  217 (245)
T 2f9n_A          150 VPIMENHICDAKYHLGAYTGDDVRIIRDDMLCAGNSQRDSCQGDSGGPLVCKVNGTWLQAGVVSWGEG  217 (245)
T ss_dssp             CCEECHHHHHHHHHTTCCSCTTSCCSCTTEEEECCSSSBCCTTCTTCEEEEEETTEEEEEEEEEECSS
T ss_pred             EEEcCHHHhhhhhcccccccccccccccccEeecCCCCCcCCCCCCCceEEEECCEEEEEEEEEeCCC
Confidence               6777776543211        11112222      47888888777    23  46788899863

>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B

Probab=99.81  E-value=7.5e-20  Score=115.84  Aligned_cols=122  Identities=21%  Similarity=0.386  Sum_probs=90.5

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.++++||+|+.....||||||+|++++.++++++|+|||...... .+..++++|||.+..... ....|+.+. 
T Consensus        71 ~~~~v~~i~~hp~y~~~~~~~DiALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~-~~~~L~~~~~  149 (235)
T 4dgj_A           71 VPRLIDEIVINPHYNRRRKDNDIAMMHLEFKVNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQGT-TADILQEADV  149 (235)
T ss_dssp             EEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSBSSTTCC-BCSBCEEEEE
T ss_pred             eEEeEEEEEECCCCCCCCCCCeEEEEEECCccccCCcccccCCCCcccCCCCCCEEEEEecccCCCCCc-cchhheEeEe
Confidence            45678999999999999999999999999999999999999999766433 788999999998765533 356677655 


Q ss_pred             --ccCCeEEEEeccceeeccCe--------eeeecCCCCCCC--CC----ceEEEEeeccc
Q psy15292         80 --ISNDVALIKIDKDVVFKQHI--------IPVCLPDQTVKL--VG----KSATVAGWGRT  124 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~~~~~v--------~~icl~~~~~~~--~g----~~~~v~gwg~~  124 (132)
                        ++++.|...+.......+.+        ...|.++++.++  .+    ....|..||..
T Consensus       150 ~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~Gi~S~g~~  210 (235)
T 4dgj_A          150 PLLSNERCQQQMPEYNITENMICAGYEEGGIDSCQGDSGGPLMCQENNRWFLAGVTSFGYE  210 (235)
T ss_dssp             EEECHHHHHHHCTTSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSS
T ss_pred             eecCHHHhhhhccCccCCCCeEeecCCCCCCccCCCCCCCeEEEEECCcEEEEEEEEEcCC
Confidence              77777765443211111222        246888888777  22    27888999954

>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}

Probab=99.80  E-value=1.4e-19  Score=117.26  Aligned_cols=120  Identities=27%  Similarity=0.475  Sum_probs=87.6

Q ss_pred             eEEeeeEEEeCCCCCCCCC--CCceEEEEeCCCeeeCCCeeeeeecCCCCc-ccCCcEEEeccCccccCCCcccccceee
Q psy15292          2 FKLNTRQSFVHPQYSPSDF--RNDVALIKIDKDVVFKQHIIPVCLPDQTVK-LVGKSATVAGWGRTRHASSLSSAIPTYV   78 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~--~~diall~l~~~~~~~~~~~~~cl~~~~~~-~~g~~~~~~GwG~~~~~~~~~~~~l~~~   78 (132)
                      +.+.|.++++||+|+....  .||||||+|++++.|+++++|+|||..... ..+..++++|||.+..+.  .+..++++
T Consensus       110 ~~~~v~~i~~Hp~y~~~~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GWG~t~~~~--~~~~l~~~  187 (278)
T 2olg_A          110 IDLGIEETIQHPDYVDGSKDRYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRTETGQ--YSTIKQKL  187 (278)
T ss_dssp             EEECEEEEEECTTCCTTCSSCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSSCC--CCSBCEEE
T ss_pred             eEEeeEEEEECCCCcCCCCCCCCeEEEEEECCCCcCCCCcCccCcCCCCCCcCCCCEEEEEcCCcCCCCC--ccchhhcc
Confidence            4577899999999987664  799999999999999999999999976542 368899999999876542  35567765


Q ss_pred             e---ccCCeEEEEecc-ceee-ccCee-------eeecCCCCCCC--C---C--ceEEEEeecc
Q psy15292         79 S---ISNDVALIKIDK-DVVF-KQHII-------PVCLPDQTVKL--V---G--KSATVAGWGR  123 (132)
Q Consensus        79 ~---~~~d~c~~~~~~-~~~~-~~~v~-------~icl~~~~~~~--~---g--~~~~v~gwg~  123 (132)
                      .   ++++.|...+.. .... ...+|       ..|.++++.++  .   +  ...+|..||.
T Consensus       188 ~~~i~~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGGPL~~~~~~~~~~l~GIvS~g~  251 (278)
T 2olg_A          188 AVPVVHAEQCAKTFGAAGVRVRSSQLCAGGEKAKDSCGGDSGGPLLAERANQQFFLEGLVSFGA  251 (278)
T ss_dssp             EEEBCCGGGGGGGGSSTTCCCCTTEEEECCTTCTTCCCCCTTCEEEEEEGGGEEEEEEEEEECC
T ss_pred             cccccCHHHHHHHhccccccCCCceEeeecCCCCeeCCCccCcceEEEcCCCcEEEEEEEEECC
Confidence            5   778888654432 1111 12222       36778887776  2   1  3678889994

>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}

Probab=99.80  E-value=5.9e-20  Score=124.00  Aligned_cols=123  Identities=24%  Similarity=0.443  Sum_probs=91.4

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCC-cccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS-LSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~-~~~~~l~~~~-   79 (132)
                      +.+.|.++++||+|+...+.||||||+|++++.|+++++|||||.......+..++++|||.+..... ..+..|+++. 
T Consensus       210 ~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~pv~~~~~v~PicLp~~~~~~~~~~~~v~GWG~t~~~~~~~~s~~L~~~~v  289 (394)
T 2b9l_A          210 QERKIRQVIIHSNFNPKTVVNDVALLLLDRPLVQADNIGTICLPQQSQIFDSTECFASGWGKKEFGSRHRYSNILKKIQL  289 (394)
T ss_dssp             EEEEEEEEEECTTCCTTTCTTCCEEEEESSCCBCCTTCCCCBCCCTTCCCCCSCEEEEECCTTTTTCTTSSCCBCEEEEE
T ss_pred             EEEEEEEEEECCCCCCCccccceEEEEecCccccCCceeeeEcCCcccCccCCEEEEEeccCccCCCCCcccccceEEEE
Confidence            56789999999999998899999999999999999999999999765544678899999998765432 2456777766 


Q ss_pred             --ccCCeEEEEeccc-----eeec-cCe-------eeeecCCCCCCC--C--C-----ceEEEEeeccc
Q psy15292         80 --ISNDVALIKIDKD-----VVFK-QHI-------IPVCLPDQTVKL--V--G-----KSATVAGWGRT  124 (132)
Q Consensus        80 --~~~d~c~~~~~~~-----~~~~-~~v-------~~icl~~~~~~~--~--g-----~~~~v~gwg~~  124 (132)
                        ++++.|...+...     +.+. ..+       ...|.++++.++  .  +     ...+|..||..
T Consensus       290 ~iv~~~~C~~~~~~~~~~~~~~i~~~~iCAg~~~g~d~C~GDSGGPLv~~~~~~~~~~~lvGIvS~G~~  358 (394)
T 2b9l_A          290 PTVDRDKCQADLRNTRLGLKFVLDQTFVCAGGEQGKDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGIG  358 (394)
T ss_dssp             CEECHHHHHHHHHTTTTCTTCCCCTTEEEECCBSSCSCCSSCTTCEEEEEETTEEEEEEEEEEESCTTC
T ss_pred             EEECHHHHHHHHhhcccccceecCCCEEEeeCCCCCcCCCCCcchhhEEEEcCCCCeEEEEEEEEECCC
Confidence              7788886544321     1111 222       247888888776  2  1     35788889863

>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*

Probab=99.80  E-value=1e-19  Score=115.64  Aligned_cols=122  Identities=20%  Similarity=0.357  Sum_probs=88.9

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCc-ccCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK-LVGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~-~~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.++++||+|+.....+|||||+|++++.++++++|+|||..... ..+..++++|||.+..... .+..|+.+. 
T Consensus        72 ~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~-~~~~L~~~~~  150 (241)
T 2any_A           72 PFSQIKEIIIHQNYKVSEGNHDIALIKLQAPLEYTEFQKPISLPSKGDTSTIYTNCWVTGWGFSKEKGE-IQNILQKVNI  150 (241)
T ss_dssp             CCBCEEEEEECTTCCTTSSSSCCEEEEESSCCCCBTTBCCCCCCCSSCCSTTCSEEEEEESSCSSTTCC-CCSBCEEEEE
T ss_pred             eEEeeEEEEECCCCCCCCCCCCeEEEEeCCcccCCCCcceeEcCCcccCCCCCCeEEEEecccCCCCCC-cCchhheeEe
Confidence            3467899999999999889999999999999999999999999976532 3688999999998765433 355666655 


Q ss_pred             --ccCCeEEEEeccceeecc--------CeeeeecCCCCCCC--C--C--ceEEEEeeccc
Q psy15292         80 --ISNDVALIKIDKDVVFKQ--------HIIPVCLPDQTVKL--V--G--KSATVAGWGRT  124 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~~~~--------~v~~icl~~~~~~~--~--g--~~~~v~gwg~~  124 (132)
                        ++++.|...+........        .....|.++++.++  .  |  ....|..||..
T Consensus       151 ~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~  211 (241)
T 2any_A          151 PLVTNEECQKRYQDYKITQRMVCAGYKEGGKDACKGDSGGPLVCKHNGMWRLVGITSWGEG  211 (241)
T ss_dssp             EEECHHHHHTTSCTTCSCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSS
T ss_pred             EEeCHHHhhhHhccCCCCcCcEeecCCCCCCccCCCCCCCcEEEEECCEEEEEEEEEecCC
Confidence              677777544322111111        12347888888776  2  2  47888899863

>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}

Probab=99.80  E-value=4.5e-20  Score=125.06  Aligned_cols=123  Identities=22%  Similarity=0.389  Sum_probs=90.4

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCC----cccCCcEEEeccCccccCCCccccccee
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTV----KLVGKSATVAGWGRTRHASSLSSAIPTY   77 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~----~~~g~~~~~~GwG~~~~~~~~~~~~l~~   77 (132)
                      +.+.|.++++||+|+...+.||||||+|++++.|+++++|||||....    ...+..++++|||.+....  .+..|++
T Consensus       202 ~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~~v~~~~~V~PICLp~~~~~~~~~~~~~~~~v~GWG~t~~~~--~s~~L~~  279 (408)
T 2xxl_A          202 VNVGIEKHLIHEKYDARHIMHDIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTENGS--SSDVLLQ  279 (408)
T ss_dssp             EEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCBTTBCCCBCCCSHHHHHHTTTCSEEEEEECCCBTTBC--SCSBCEE
T ss_pred             EEEeEEEEEeCCCCCccccccceEEEEECCccccccCccccCCCCcccccccccCCCEEEEEEeCcCCCCC--CCchheE
Confidence            467899999999999989999999999999999999999999997542    2367889999999976553  3566776


Q ss_pred             ee---ccCCeEEEEeccceeeccCe-------eeeecCCCCCCC------C----C--ceEEEEeecccCcC
Q psy15292         78 VS---ISNDVALIKIDKDVVFKQHI-------IPVCLPDQTVKL------V----G--KSATVAGWGRTRHA  127 (132)
Q Consensus        78 ~~---~~~d~c~~~~~~~~~~~~~v-------~~icl~~~~~~~------~----g--~~~~v~gwg~~~~~  127 (132)
                      +.   ++++.|...+...+.. ..+       ...|.++++.++      .    +  ...+|..||...+.
T Consensus       280 ~~v~iv~~~~C~~~~~~~~~~-~~iCAg~~~g~d~C~GDSGGPL~~~~~~~~~~~~~~~l~GIvS~G~~~Cg  350 (408)
T 2xxl_A          280 ANVPLQPRSACSQAYRRAVPL-SQLCVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCG  350 (408)
T ss_dssp             EEEEEECHHHHHHHHTSCCCT-TEEEECCSCSSSGGGSCTTCEEEEEECCTTCSSCEEEEEEEEEECCCCTT
T ss_pred             eeeeecCHHHHHHHhcccCCC-ceEeecCCCCCccCCCcccChhhcCccceEEECCEEEEEEEEEECCCCCC
Confidence            65   6777786554332111 222       246778887776      2    1  45688889954443

>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*

Probab=99.80  E-value=1.2e-19  Score=114.29  Aligned_cols=121  Identities=24%  Similarity=0.323  Sum_probs=89.0

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCC-cccCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTV-KLVGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~-~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.++++||+|+..  .+|||||+|++++.++++++|+|||.... ...+..++++|||.+.......+..|+.+. 
T Consensus        65 ~~~~v~~i~~hp~y~~~--~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~l~~~~~  142 (224)
T 1pq7_A           65 ITSSLSSVRVHPSYSGN--NNDLAILKLSTSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTV  142 (224)
T ss_dssp             EEECEEEEEECTTCBTT--BTCCEEEEESSCCCCBTTBCCCCBCCTTCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEE
T ss_pred             EEEEEEEEEECCCCCCC--CCCEEEEEeCCCCcCCCcccceecCCcccCCCCCCEEEEEecCCcCCCCCcccceeeEeEE
Confidence            46789999999999876  89999999999999999999999994322 237889999999998765433456677655 


Q ss_pred             --ccCCeEEEEeccceeecc--------CeeeeecCCCCCCC---CCceEEEEeeccc
Q psy15292         80 --ISNDVALIKIDKDVVFKQ--------HIIPVCLPDQTVKL---VGKSATVAGWGRT  124 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~~~~--------~v~~icl~~~~~~~---~g~~~~v~gwg~~  124 (132)
                        ++++.|...+........        .....|.++++.++   .|....|..||..
T Consensus       143 ~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~g~l~Gi~S~g~~  200 (224)
T 1pq7_A          143 PIVSRATCRAQYGTSAITNQMFCAGVSSGGKDSCQGDSGGPIVDSSNTLIGAVSWGNG  200 (224)
T ss_dssp             EEECHHHHHHHHCTTTSCTTEEEECCTTCCCBCCTTCTTCEEECTTCCEEEEEEECSS
T ss_pred             EEEcHHHhhHhhcCCCCCCCeEEeecCCCCCCCCcCCCCcceECcCCeEEEEEEeCCC
Confidence              677777654421111111        22346888888776   5788999999963

>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2

Probab=99.80  E-value=2.2e-19  Score=114.17  Aligned_cols=121  Identities=22%  Similarity=0.341  Sum_probs=88.0

Q ss_pred             eEEeeeEEEeCCCCCCCCCC--CceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceee
Q psy15292          2 FKLNTRQSFVHPQYSPSDFR--NDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYV   78 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~--~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~   78 (132)
                      +.+.|.++++||+|+.....  +|||||+|++|+.++++++|+|||...... .+..++++|||.+..... .+..|+++
T Consensus        70 ~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~-~~~~L~~~  148 (241)
T 1bru_P           70 LAVKVSKLVVHQDWNSNQLSNGNDIALLKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNGA-SPDILQQG  148 (241)
T ss_dssp             EEEEEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSTTSC-CCSBCEEE
T ss_pred             EEEEEEEEEECCCCCCCCCCCCCcEEEEEeCCCcccCCccCCcccCCCcCCCCCCCEEEEEEccccCCCCC-CCccceeC
Confidence            56789999999999987766  999999999999999999999999765432 678899999998765442 35567765


Q ss_pred             e---ccCCeEEEEeccceee-ccCe-------eeeecCCCCCCC--C---C--ceEEEEeecc
Q psy15292         79 S---ISNDVALIKIDKDVVF-KQHI-------IPVCLPDQTVKL--V---G--KSATVAGWGR  123 (132)
Q Consensus        79 ~---~~~d~c~~~~~~~~~~-~~~v-------~~icl~~~~~~~--~---g--~~~~v~gwg~  123 (132)
                      .   ++++.|...+...... ...+       ...|.++++.++  .   |  ....|..||.
T Consensus       149 ~~~i~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~~g~~~l~Gi~S~g~  211 (241)
T 1bru_P          149 QLLVVDYATCSKPGWWGSTVKTNMICAGGDGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGS  211 (241)
T ss_dssp             EEEEECHHHHTSTTTTGGGCCTTEEEECCSSSSBCCTTCTTCEEEEECTTSCEEEEEEEEECB
T ss_pred             EEEEecHHHhCcccccCCcCCCceEeecCCCCCccCCCCCCCcEEEECCCCCEEEEEEEEEcC
Confidence            5   6667775421101011 1222       246888888777  2   2  5688999996

>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}

Probab=99.79  E-value=2.1e-19  Score=113.65  Aligned_cols=122  Identities=20%  Similarity=0.336  Sum_probs=88.5

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.++++||+|+...+.+|||||+|++++.|+++++|+|||...... .+..++++|||.+..... .+..|+.+. 
T Consensus        65 ~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~-~~~~L~~~~~  143 (232)
T 2oq5_A           65 MKRGLRRIIVHEKYKHPSHDYDISLAELSSPVPYTNAVHRVCLPDASYEFQPGDVMFVTGFGALKNDGY-SQNHLRQAQV  143 (232)
T ss_dssp             EEEEEEEEEECTTCCTTCCTTCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCEEEEEESCCSSTTCC-CCSBCEEEEE
T ss_pred             eEEeEEEEEeCCCCCCCCCCCCEEEEEecCCCccCCceeEeECCCccccCCCCCEEEEEECCccCCCCC-CCceeeEeEE
Confidence            46789999999999998999999999999999999999999999765433 688999999998765432 345666655 


Q ss_pred             --ccCCeEEEEeccceee-ccC--------eeeeecCCCCCCC--CC-----ceEEEEeeccc
Q psy15292         80 --ISNDVALIKIDKDVVF-KQH--------IIPVCLPDQTVKL--VG-----KSATVAGWGRT  124 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~~-~~~--------v~~icl~~~~~~~--~g-----~~~~v~gwg~~  124 (132)
                        ++++.|...+...... ...        ....|.++++.++  .+     ....|..||..
T Consensus       144 ~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~GI~S~g~~  206 (232)
T 2oq5_A          144 TLIDATTCNEPQAYNDAITPRMLCAGSLEGKTDACQGDSGGPLVSSDARDIWYLAGIVSWGDE  206 (232)
T ss_dssp             EEECHHHHTSTTTTTTCCCTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSS
T ss_pred             EEeCHHHcCCccccCCccCCCEEeecCCCCCCccCCCCCCCcEEEECCCCCEEEEEEEEeCCC
Confidence              6667775421110001 111        2347888888777  33     47889999863

>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2

Probab=99.79  E-value=1.9e-19  Score=115.12  Aligned_cols=121  Identities=23%  Similarity=0.331  Sum_probs=87.2

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.++++||+|+.....||||||+|++++.++++++|+|||...... .+..++++|||.+..... ....|+.+. 
T Consensus        84 ~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~-~~~~L~~~~~  162 (251)
T 1pyt_D           84 LYVGVDTIFVHEKWNSFLVRNDIALIKLAETVELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTNGP-IAAELQQGLQ  162 (251)
T ss_dssp             EEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEECBCCCSSCCSC-CCSBCBCCEE
T ss_pred             EEEEEEEEEECCCCCCCCCCCCEEEEEECCCcccCCCeeeeEcCCCcccCCCCCEEEEEecccCCCCCC-cccchheeEe
Confidence            35689999999999998899999999999999999999999999765433 678899999998765543 244566544 


Q ss_pred             --ccCCeEEEEeccceee-ccCe-------eeeecCCCCCCC--C--C--ceEEEEeecc
Q psy15292         80 --ISNDVALIKIDKDVVF-KQHI-------IPVCLPDQTVKL--V--G--KSATVAGWGR  123 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~~-~~~v-------~~icl~~~~~~~--~--g--~~~~v~gwg~  123 (132)
                        ++++.|...+...... ...+       ...|.++++.++  .  |  ....|..||.
T Consensus       163 ~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~  222 (251)
T 1pyt_D          163 PVVDYATCSQRDWWGTTVKETMVCAGGDGVISACNGDSGGPLNCQADGQWDVRGIVSFGS  222 (251)
T ss_dssp             ECBCHHHHTSTTTTTTTCCTTEEEECCSCSSCCCCSCTTCEEEEESSSSEEEEEEEEECC
T ss_pred             EeeCHHHcchhhccCCCcCCCeEEecCCCCCccCCCCCCCceEEEECCCEEEEEEEEECC
Confidence              6666675432111111 1112       246888888777  2  3  4788999996

>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A

Probab=99.79  E-value=7.8e-19  Score=110.60  Aligned_cols=121  Identities=23%  Similarity=0.373  Sum_probs=89.5

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.++++||+|+...+.||||||+|++++.++..++|+|||...... .+..++++|||.+..... ....|+.+. 
T Consensus        68 ~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~-~~~~L~~~~~  146 (226)
T 4ag1_A           68 QKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKP-GSDTLQEVKL  146 (226)
T ss_dssp             EEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCCSSSCCCCCC-----CCTTCEEEEEESSBSSTTSC-BCSBCEEEEE
T ss_pred             eEEEEEEEEeCCCCCCCCCcCcEEEEEECCCCccCCceeccccCCcccCCCCCCEEEEEECCCCCCCCC-CCCEeEEEEE
Confidence            56789999999999999999999999999999999999999998765432 788999999998765432 356676655 


Q ss_pred             --ccCCeEEEEeccceeec--------cCeeeeecCCCCCCC--CCceEEEEeecccC
Q psy15292         80 --ISNDVALIKIDKDVVFK--------QHIIPVCLPDQTVKL--VGKSATVAGWGRTR  125 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~~~--------~~v~~icl~~~~~~~--~g~~~~v~gwg~~~  125 (132)
                        ++++.|.. +. .+...        ......|.++++.++  .+....|..||...
T Consensus       147 ~~~~~~~C~~-~~-~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~l~Gi~S~g~~c  202 (226)
T 4ag1_A          147 RLMDPQACSH-FR-DFDHNLQLCVGNPRKTKSAFKGDSGGPLLCAGVAQGIVSYGRSD  202 (226)
T ss_dssp             EEECGGGGTT-ST-TCCTTTEEEESCTTSCCBCCTTCTTCEEEETTEEEEEEEECBTT
T ss_pred             EEcChHHccc-cc-CcCccceEeeccCCCCCcCccCCCCCceEEcCEEEEEEEECCCC
Confidence              77777751 11 11111        122357888888877  78889999999753

>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2

Probab=99.79  E-value=2.7e-19  Score=112.54  Aligned_cols=123  Identities=20%  Similarity=0.304  Sum_probs=92.0

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.++++||+|+.....+|||||+|++++.+++.++|+|||...... .+..++++|||.+..... ....++.+. 
T Consensus        68 ~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~-~~~~l~~~~~  146 (224)
T 3rp2_A           68 QKIKVEKQIIHESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTGVRDP-TSYTLREVEL  146 (224)
T ss_dssp             EEEEEEEEEECTTCCSSSCCSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSEEETTEE-ECSBCEEEEE
T ss_pred             EEEEEEEEEECCCccCCCCCccEEEEEcCCCcccCCcccceecCCcccCCCCCCEEEEEeCCCCCCCCC-CCceeeEeee
Confidence            46789999999999999999999999999999999999999999765533 788999999998765432 345566655 


Q ss_pred             --ccCCeEEEE--e-ccc-eee--ccCeeeeecCCCCCCC--CCceEEEEeecccC
Q psy15292         80 --ISNDVALIK--I-DKD-VVF--KQHIIPVCLPDQTVKL--VGKSATVAGWGRTR  125 (132)
Q Consensus        80 --~~~d~c~~~--~-~~~-~~~--~~~v~~icl~~~~~~~--~g~~~~v~gwg~~~  125 (132)
                        ++++.|...  + ... +-.  .......|.++++.++  .+....|..||...
T Consensus       147 ~~~~~~~C~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~l~Gi~S~g~~c  202 (224)
T 3rp2_A          147 RIMDEKACVDYRYYEYKFQVCVGSPTTLRAAFMGDSGGPLLCAGVAHGIVSYGHPD  202 (224)
T ss_dssp             EEECGGGTTTTTCCCTTTEEEECCTTSCCBCCTTTTTCEEEETTEEEEEEEECCTT
T ss_pred             eecChHHhccccccCcCCEEEecCCCCCCeeccCCCCCeEEEcceeeEEEEECCCC
Confidence              777777530  0 000 110  1222457888988887  78889999999753

>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*

Probab=99.79  E-value=2.9e-19  Score=113.08  Aligned_cols=121  Identities=19%  Similarity=0.319  Sum_probs=90.4

Q ss_pred             EeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee---c
Q psy15292          4 LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS---I   80 (132)
Q Consensus         4 ~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~---~   80 (132)
                      ..+..++.||+|....+.||||||+|++++.++++++|+|||..... .+..++++|||.+...  .....++...   +
T Consensus        69 ~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~~~v~pi~L~~~~~~-~~~~~~v~GwG~~~~~--~~~~~l~~~~~~~~  145 (234)
T 3s9c_A           69 VPRGKYFCLNTKFPNGLDKDIMLIRLRRPVTYSTHIAPVSLPSRSRG-VGSRCRIMGWGKISTT--TYPDVPHCTNIFIV  145 (234)
T ss_dssp             CEEEEECCSSCSSTTCGGGCCEEEEESSCCCCBTTBCCCBCCSSCCC-TTCEEEEEESSCSBTT--BCCSSCEEEEEEEE
T ss_pred             EeeeEEEeCCCCCCCCCcCceEEEEECCccccCCcccccccCCCCCC-CCCeEEEEeeCCCCCC--CCCccccccceEec
Confidence            34566778999999889999999999999999999999999987654 5889999999987654  3355566655   6


Q ss_pred             cCCeEEEEeccceeec--------cCeeeeecCCCCCCC--CCceEEEEeecccCcC
Q psy15292         81 SNDVALIKIDKDVVFK--------QHIIPVCLPDQTVKL--VGKSATVAGWGRTRHA  127 (132)
Q Consensus        81 ~~d~c~~~~~~~~~~~--------~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~~  127 (132)
                      +++.|...+.......        ..-...|.++++.++  .+....|..||...+.
T Consensus       146 ~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~l~Gi~S~g~~~C~  202 (234)
T 3s9c_A          146 KHKWCEPLYPWVPADSRTLCAGILKGGRDTCHGDSGGPLICNGEMHGIVAGGSEPCG  202 (234)
T ss_dssp             CGGGTTTTCTTSCTTSSEEEEECTTSSCBCCTTCTTCEEEETTEEEEEEEECCSSTT
T ss_pred             CHHHhhhcccCCCCCcceEEeecCCCCCccCCCCCCCeEEEeCCcEEEEEEeCCCCC
Confidence            7777765443211111        122347888998887  7889999999965443

>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...

Probab=99.79  E-value=5.9e-19  Score=112.15  Aligned_cols=121  Identities=17%  Similarity=0.250  Sum_probs=88.5

Q ss_pred             eEEeeeEEEeCCCCCCCCC--CCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceee
Q psy15292          2 FKLNTRQSFVHPQYSPSDF--RNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYV   78 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~--~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~   78 (132)
                      +.+.|.++++||+|+....  .+|||||+|++++.++++++|+|||...... .+..++++|||.+.... ..+..|+.+
T Consensus        70 ~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~-~~~~~L~~~  148 (240)
T 1gvk_B           70 QYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNG-QLAQTLQQA  148 (240)
T ss_dssp             EEEEEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCCEEEEESCBSSTTC-CBCSBCEEE
T ss_pred             eEEEEEEEEECCCCCCCCCCCCCcEEEEEECCccccCCCccceecCCCCCCCCCCCEEEEEecCcCCCCC-CcchhccEE
Confidence            4678999999999998777  8999999999999999999999999765432 68889999999876543 235667765


Q ss_pred             e---ccCCeEEEEeccceee-ccC-------eeeeecCCCCCCC----CC--ceEEEEeecc
Q psy15292         79 S---ISNDVALIKIDKDVVF-KQH-------IIPVCLPDQTVKL----VG--KSATVAGWGR  123 (132)
Q Consensus        79 ~---~~~d~c~~~~~~~~~~-~~~-------v~~icl~~~~~~~----~g--~~~~v~gwg~  123 (132)
                      .   ++++.|...+...... ...       ....|.++++.++    .|  ....|..||.
T Consensus       149 ~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~g~~~l~Gi~S~g~  210 (240)
T 1gvk_B          149 YLPTVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVS  210 (240)
T ss_dssp             ECCEECHHHHTSTTTTGGGCCTTEEEECCSSSCBCCTTCTTCEEEEEETTEEEEEEEEEECB
T ss_pred             EEEEEcHHHhccccccCccCCcceEeecCCCCCcccCCCCcCceEEEECCcEEEEEEEEEeC
Confidence            5   6666775421101001 112       2346888888777    34  6788999985

>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...

Probab=99.78  E-value=1.6e-19  Score=117.56  Aligned_cols=120  Identities=23%  Similarity=0.433  Sum_probs=85.4

Q ss_pred             EEeeeEEEeCCCCCC-CCCCCceEEEEeCCCeeeCCCeeeeeecCCCC----cccCCcEEEeccCccccCCC-----ccc
Q psy15292          3 KLNTRQSFVHPQYSP-SDFRNDVALIKIDKDVVFKQHIIPVCLPDQTV----KLVGKSATVAGWGRTRHASS-----LSS   72 (132)
Q Consensus         3 ~~~v~~~~~h~~y~~-~~~~~diall~l~~~~~~~~~~~~~cl~~~~~----~~~g~~~~~~GwG~~~~~~~-----~~~   72 (132)
                      .+.|.++++||+|+. ..+.||||||+|++|+.|+++++|+|||....    ...+..++++|||.+.....     ..+
T Consensus       108 ~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~g~~~~v~GWG~~~~~~~~~~~~~~~  187 (289)
T 2bdy_A          108 ISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQP  187 (289)
T ss_dssp             EEEEEEEEECTTCBTTTTCBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESSCSSCC-------CCC
T ss_pred             eeeeEEEEECCCCCCCCCCCCeEEEEEECCccccCCcccccCCCCccccccccCCCCEEEEECCCcCCCccccCcccccc
Confidence            467899999999985 56789999999999999999999999987542    12678899999998765321     114


Q ss_pred             ccceeee---ccCCeEEEEeccceeeccC-----------eeeeecCCCCCCC--CC------ceEEEEeecc
Q psy15292         73 AIPTYVS---ISNDVALIKIDKDVVFKQH-----------IIPVCLPDQTVKL--VG------KSATVAGWGR  123 (132)
Q Consensus        73 ~~l~~~~---~~~d~c~~~~~~~~~~~~~-----------v~~icl~~~~~~~--~g------~~~~v~gwg~  123 (132)
                      ..|+++.   ++++.|...+...+ ....           ....|.++++.++  .+      ....|..||.
T Consensus       188 ~~L~~~~v~i~~~~~C~~~~~~~i-~~~~iCag~~~~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~  259 (289)
T 2bdy_A          188 SVLQVVNLPIVERPVCKDSTRIRI-TDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGE  259 (289)
T ss_dssp             SBCEEEEEEBCCHHHHHHTCSSCC-CTTEEEECCCGGGCCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECS
T ss_pred             ccceEEEEEEECHHHhhccccCcC-CCCEEeccCCCCCCCCCccCCCCCccceEEEECCCCCEEEEEEEEECC
Confidence            5677665   67777764332111 0111           2347888888777  33      3688999996

>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*

Probab=99.78  E-value=5.2e-19  Score=112.31  Aligned_cols=122  Identities=24%  Similarity=0.424  Sum_probs=89.9

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.++++||+|+...+.+|||||+|++++.++++++|+|||...... .+..++++|||.+..... ....++.+. 
T Consensus        76 ~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~piclp~~~~~~~~~~~~~v~GwG~~~~~~~-~~~~l~~~~~  154 (241)
T 3ncl_A           76 QERRLKRIISHPFFNDFTFDYDIALLELEKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYGGT-GALILQKGEI  154 (241)
T ss_dssp             EEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSC-BCSBCEEEEE
T ss_pred             eEEEEEEEEECCCCCCCCCCCcEEEEEECCCCcccCccCceEcCCcccCCCCCCEEEEEEecccCCCCC-cCceeeEEeE
Confidence            56789999999999999999999999999999999999999999765433 688999999998765543 355666655 


Q ss_pred             --ccCCeEEEEecccee----e---ccCeeeeecCCCCCCC--C---C--ceEEEEeeccc
Q psy15292         80 --ISNDVALIKIDKDVV----F---KQHIIPVCLPDQTVKL--V---G--KSATVAGWGRT  124 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~----~---~~~v~~icl~~~~~~~--~---g--~~~~v~gwg~~  124 (132)
                        ++++.|...+...+.    .   ...-...|.++++.++  .   |  ....|..||..
T Consensus       155 ~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~g~~~l~Gi~S~g~~  215 (241)
T 3ncl_A          155 RVINQTTCENLLPQQITPRMMCVGFLSGGVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDG  215 (241)
T ss_dssp             EECCHHHHHHHSTTTCCTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSS
T ss_pred             EEECHHHhhhhcccCCCCCeEEeCCCCCCCccCCCcCCCCEEEEcCCCcEEEEEEEEECCC
Confidence              667777654432111    0   1112246888888776  1   2  26788999864

>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*

Probab=99.78  E-value=5.7e-19  Score=113.34  Aligned_cols=123  Identities=24%  Similarity=0.404  Sum_probs=89.6

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCc-ccccceeee
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSL-SSAIPTYVS   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~-~~~~l~~~~   79 (132)
                      +.+.|.++++||+|+.....+|||||+|++++.|+++++|+|||...... .+..|+++|||.+...... ....++.+.
T Consensus        69 ~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~l~~~~  148 (261)
T 3gyl_B           69 KVSTLKDIIPHPSYLQEGSQGDIALLQLSRPITFSRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVSLLTPKPLQQLE  148 (261)
T ss_dssp             EEECEEEEEECTTCCSTTCSCCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCCCTTCBCEEEE
T ss_pred             eEEEEEEEEECCCcCCCCCCCcEEEEEECCCccCCCceeccCCCCcccCCCCCCEEEEEecCCCCCCCCccCCccceEEE
Confidence            46789999999999999999999999999999999999999998765543 6889999999987654321 245566655


Q ss_pred             ---ccCCeEEEEeccc-------eeec--------cCeeeeecCCCCCCC--C--C--ceEEEEeeccc
Q psy15292         80 ---ISNDVALIKIDKD-------VVFK--------QHIIPVCLPDQTVKL--V--G--KSATVAGWGRT  124 (132)
Q Consensus        80 ---~~~d~c~~~~~~~-------~~~~--------~~v~~icl~~~~~~~--~--g--~~~~v~gwg~~  124 (132)
                         ++++.|...+...       +...        ..-...|.++++.++  .  |  ...+|..||..
T Consensus       149 ~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~lvGI~S~g~~  217 (261)
T 3gyl_B          149 VPLISRETCNSLYNIDAKPEEPHFVQEDMVCAGYVEGGKDACQGDSGGPLSCPVEGLWYLTGIVSWGDA  217 (261)
T ss_dssp             EEEECHHHHHHHHTTTCCTTCCCCCCTTEEEESCSSSSCBCCTTTTTCEEEEEETTEEEEEEEECCCCC
T ss_pred             EEEECHHHhhhhhcccccccccccccCCeEeeCCCCCCCccCCCCCCCeeEEEeCCEEEEEEEEecCCC
Confidence               6777776543210       0111        222347888888777  2  3  37788889843

>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2

Probab=99.78  E-value=9.9e-19  Score=110.83  Aligned_cols=121  Identities=16%  Similarity=0.227  Sum_probs=88.2

Q ss_pred             eEEeeeEEEeCCCCCCCCC--CCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceee
Q psy15292          2 FKLNTRQSFVHPQYSPSDF--RNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYV   78 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~--~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~   78 (132)
                      +.+.|.++++||+|+....  .+|||||+|++++.+++.++|+|||...... .+..++++|||.+.... ..+..|+++
T Consensus        70 ~~~~v~~i~~hp~y~~~~~~~~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~-~~~~~l~~~  148 (236)
T 1elt_A           70 QIMTVNSVFIHSGWNSDDVAGGYDIALLRLNTQASLNSAVQLAALPPSNQILPNNNPCYITGWGKTSTGG-PLSDSLKQA  148 (236)
T ss_dssp             EEECEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCCEEEEESCCSSTTC-CCCSBCEEE
T ss_pred             EEEEEEEEEECCCCCCCCCCCCccEEEEECCCCCccCCcEEeccCCCccccCCCCCEEEEEeCCCcCCCC-CcChhheEe
Confidence            4678999999999998776  8999999999999999999999999765432 68889999999876543 235567765


Q ss_pred             e---ccCCeEEEEeccceee-ccCe------eeeecCCCCCCC----CC--ceEEEEeecc
Q psy15292         79 S---ISNDVALIKIDKDVVF-KQHI------IPVCLPDQTVKL----VG--KSATVAGWGR  123 (132)
Q Consensus        79 ~---~~~d~c~~~~~~~~~~-~~~v------~~icl~~~~~~~----~g--~~~~v~gwg~  123 (132)
                      .   ++++.|.......... ...+      ...|.++++.++    .|  ....|..||.
T Consensus       149 ~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~GDSGgPL~~~~~g~~~l~Gi~S~g~  209 (236)
T 1elt_A          149 WLPSVDHATCSSSGWWGSTVKTTMVCAGGGANSGCNGDSGGPLNCQVNGSYYVHGVTSFVS  209 (236)
T ss_dssp             ECCEECHHHHTSTTTTGGGSCTTEEEECCSSCBCCTTCTTCEEEEEETTEEEEEEEEEECC
T ss_pred             EeeecCHHHhccccccCCcCCcceEEecCCCCccCCCCCCCeeEEEECCEEEEEEEEEEeC
Confidence            5   6667775431101011 1222      346888888877    34  5788999985

>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C

Probab=99.78  E-value=3.5e-19  Score=113.14  Aligned_cols=121  Identities=19%  Similarity=0.247  Sum_probs=87.3

Q ss_pred             eEEeeeEEEeCCCCCCCCCC--CceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceee
Q psy15292          2 FKLNTRQSFVHPQYSPSDFR--NDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYV   78 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~--~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~   78 (132)
                      +.+.|.++++||+|+.....  +|||||+|++++.|+++++|+|||...... .+..++++|||.+.... ..+..|+.+
T Consensus        70 ~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~-~~~~~L~~~  148 (240)
T 1fon_A           70 IPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQLGDKVQLANLPPAGDILPNEAPCYISGWGRLYTGG-PLPDKLQQA  148 (240)
T ss_dssp             EEECTTSEEECTTCCTTCGGGCCCCEEEECSSCCCCTTSCCCCBCCCTTCCCCTTCCCEEEECTTCCCSS-SCCSBCEEE
T ss_pred             EeeeeeEEEECCCCcCCCccCCCCEEEEEecCccccCCcccccCCCCcccCCCCCCeEEEEEEeEcCCCC-CCChhheEE
Confidence            45678899999999987777  999999999999999999999999765433 68889999999876543 245667766


Q ss_pred             e---ccCCeEEEEeccceee-ccCe------eeeecCCCCCCC-----CC--ceEEEEeecc
Q psy15292         79 S---ISNDVALIKIDKDVVF-KQHI------IPVCLPDQTVKL-----VG--KSATVAGWGR  123 (132)
Q Consensus        79 ~---~~~d~c~~~~~~~~~~-~~~v------~~icl~~~~~~~-----~g--~~~~v~gwg~  123 (132)
                      .   ++++.|...+...... ...+      ...|.++++.++     .|  ....|..||.
T Consensus       149 ~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~  210 (240)
T 1fon_A          149 LLPTVDYEHCSQWDWWGITVKKTMVCAGGDTRSGCNGDSGGPLNCPAADGSWQVHGVTSFVS  210 (240)
T ss_dssp             ECCEECHHHHTSTTTTGGGCCTTEEEECCSSSCSTTSCTTCEEEEECSSSCEEEEEEEEECC
T ss_pred             EEeeeCHHHhccceecCCccccceEeecCCCCcccCCCCCCeEEeEcCCCCEEEEEEEEEcC
Confidence            5   6667775421111111 1222      346788888776     23  5678999985

>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...

Probab=99.77  E-value=9.7e-19  Score=101.70  Aligned_cols=64  Identities=31%  Similarity=0.660  Sum_probs=57.2

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccc
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR   65 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~   65 (132)
                      +.+.|.++++||+|+...+.||||||+|++++.|+++++|+|||...... .+..|+++|||.+.
T Consensus        66 ~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~g~~~~v~GWG~t~  130 (131)
T 1yph_C           66 QKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTR  130 (131)
T ss_dssp             EEEEEEEEEECTTCCTTTCCSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSC
T ss_pred             EEEEEEEEEeCCCCCCCCCCCCEEEEEECCcccCCCcCcceECCCcccCCCCCCEEEEEcCCccC
Confidence            56789999999999999999999999999999999999999999765433 68899999999864

>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*

Probab=99.77  E-value=2.6e-18  Score=107.77  Aligned_cols=118  Identities=17%  Similarity=0.330  Sum_probs=89.1

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.+++.| +|+.....||||||+|++++.++++++|+|||...... .+..++++|||.+..... .+..|+.+. 
T Consensus        68 ~~~~v~~i~~h-~y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~-~~~~l~~~~~  145 (218)
T 2z7f_E           68 QVFAVQRIFEN-GYDPVNLLNDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRG-IASVLQELNV  145 (218)
T ss_dssp             EEEEEEEEEES-CCBTTTTBSCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCEEEEEESSBCSSSCC-BCSBCEEEEE
T ss_pred             EEEEEEEEEcc-CCCCCCCCCCEEEEEECCcCcCCCceeccCcCCCCCCCCCCCEEEEEEeCCCCCCCC-ccchheEeee
Confidence            56789999999 99998899999999999999999999999999765433 688999999998865543 356677655 


Q ss_pred             --ccCCeEEEEeccceeeccCeeeeecCCCCCCC--CCceEEEEee--cc
Q psy15292         80 --ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL--VGKSATVAGW--GR  123 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~--~g~~~~v~gw--g~  123 (132)
                        + ++.|....-. ..........|.++++.++  .+....|..|  |.
T Consensus       146 ~~~-~~~C~~~~~C-a~~~~~~~~~C~GDSGgPl~~~~~l~Gi~S~~~g~  193 (218)
T 2z7f_E          146 TVV-TSLCRRSNVC-TLVRGRQAGVCFGDSGSPLVCNGLIHGIASFVRGG  193 (218)
T ss_dssp             EEE-CTTCCTTSEE-EECTTSCCBCCTTCTTCEEEETTEEEEEEEEESSS
T ss_pred             EEe-hhHcCcceee-eccCCCCCeeCCCcCCCceEEccEEEEEEEeCCcc
Confidence              5 6666431000 0011123468999998887  7889999999  64

>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*

Probab=99.77  E-value=5.9e-19  Score=112.06  Aligned_cols=123  Identities=25%  Similarity=0.464  Sum_probs=88.7

Q ss_pred             eEEeeeEEEeCCCCCC-CCCCCceEEEEeCCCeeeCCCeeeeeecCCCC---cccCCcEEEeccCccccCCCccccccee
Q psy15292          2 FKLNTRQSFVHPQYSP-SDFRNDVALIKIDKDVVFKQHIIPVCLPDQTV---KLVGKSATVAGWGRTRHASSLSSAIPTY   77 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~-~~~~~diall~l~~~~~~~~~~~~~cl~~~~~---~~~g~~~~~~GwG~~~~~~~~~~~~l~~   77 (132)
                      +.+.+.++++||+|+. ..+.||||||+|++++.++++++|+|||....   ...+..++++|||.+...  .....|++
T Consensus        66 ~~~~v~~i~~hp~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~~GwG~~~~~--~~~~~l~~  143 (242)
T 3tvj_B           66 TQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRG--FLARNLMY  143 (242)
T ss_dssp             EEEEEEEEEECTTCCTTSCSTTCCEEEEESSCCCCBTTBCCCBCCCTTGGGGSCTTCEEEEEESCCCTTS--SCCSBCEE
T ss_pred             ceeeEEEEEeCCCCCCCCCCcCcEEEEEECCccccCCCEecCCcCCCcccccccCCCEEEEEEeCCCCCC--CcCccceE
Confidence            4577899999999987 66889999999999999999999999997654   236888999999987643  33566776


Q ss_pred             ee---ccCCeEEEEeccc-----eeeccC--------eeeeecCCCCCCC--CC------ceEEEEeecccCc
Q psy15292         78 VS---ISNDVALIKIDKD-----VVFKQH--------IIPVCLPDQTVKL--VG------KSATVAGWGRTRH  126 (132)
Q Consensus        78 ~~---~~~d~c~~~~~~~-----~~~~~~--------v~~icl~~~~~~~--~g------~~~~v~gwg~~~~  126 (132)
                      +.   ++++.|...+...     ......        -...|.++++.++  .+      ....|..||...+
T Consensus       144 ~~~~i~~~~~C~~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~Gi~S~g~~~C  216 (242)
T 3tvj_B          144 VDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNC  216 (242)
T ss_dssp             EEEEBCCHHHHHHHHHSTTSCTTCCCTTEEEESCTTCCSBCCTTCTTCEEEEEETTTTEEEEEEEEEEEESST
T ss_pred             EeeeEEcHHHHHHhhccCCcccccccCCeEEECCCCCCCccccCCCCCeEEEEeCCCCcEEEEEEEEeCCCCC
Confidence            55   6777776544321     011111        2346888887776  21      2678899994433

>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B

Probab=99.77  E-value=7.8e-19  Score=112.03  Aligned_cols=120  Identities=22%  Similarity=0.440  Sum_probs=89.7

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      +.+.|.++++||+|+...+.+|||||+|.+++.++++++|+|||..... .+..++++|||.+....  .+..|+.+.  
T Consensus        83 ~~~~v~~i~~hp~y~~~~~~~DIAll~L~~~~~~~~~v~picLp~~~~~-~~~~~~v~GwG~~~~~~--~~~~L~~~~~~  159 (251)
T 3gov_B           83 QHLGVKHTTLHPQYDPNTFENDVALVELLESPVLNAFVMPICLPEGPQQ-EGAMVIVSGWGKQFLQR--FPETLMEIEIP  159 (251)
T ss_dssp             EEECEEEEEECTTCBTTTTBTCCEEEEESSCCCCSSSCCCCBCCSSCCC-TTCEEEEEECSCCTTSC--CCSBCEEEEEE
T ss_pred             eEeeeEEEEECCCCCCCCCCCCEEEEEeCCcccCCCceEEeECCCCCCC-CCCEEEEEcCCCCCCCC--CCccceEEeeE
Confidence            4578999999999999999999999999999999999999999977653 78899999999876542  455666655  


Q ss_pred             -ccCCeEEEEeccc-eeec---------cCeeeeecCCCCCCC--CC------ceEEEEeeccc
Q psy15292         80 -ISNDVALIKIDKD-VVFK---------QHIIPVCLPDQTVKL--VG------KSATVAGWGRT  124 (132)
Q Consensus        80 -~~~d~c~~~~~~~-~~~~---------~~v~~icl~~~~~~~--~g------~~~~v~gwg~~  124 (132)
                       ++++.|...+... ...+         ..-...|.++++.++  .+      ....|..||..
T Consensus       160 ~~~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~~l~Gi~S~g~~  223 (251)
T 3gov_B          160 IVDHSTCQKAYAPLKKKVTRDMICAGEKEGGKDACAGDSGGPMVTLNRERGQWYLVGTVSWGDD  223 (251)
T ss_dssp             EECHHHHHHHTTTTTCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSS
T ss_pred             EECHHHhhhhhhhccCCCCCCcEEecCCCCCCccCCCCCCCeEEeeeCCCCcEEEEEEEEECCC
Confidence             6677776543320 0111         112357888888776  22      47889999953

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A

Probab=99.77  E-value=4e-19  Score=120.46  Aligned_cols=123  Identities=25%  Similarity=0.489  Sum_probs=89.4

Q ss_pred             eEEeeeEEEeCCCCCCC-CCCCceEEEEeCCCeeeCCCeeeeeecCCCCc---ccCCcEEEeccCccccCCCccccccee
Q psy15292          2 FKLNTRQSFVHPQYSPS-DFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK---LVGKSATVAGWGRTRHASSLSSAIPTY   77 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~-~~~~diall~l~~~~~~~~~~~~~cl~~~~~~---~~g~~~~~~GwG~~~~~~~~~~~~l~~   77 (132)
                      +.+.|.++++||+|+.. .+.||||||+|++++.|+++++|||||.....   ..+..++++|||.+...  ..+..|++
T Consensus       227 ~~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~v~GWG~~~~~--~~~~~L~~  304 (403)
T 1zjk_A          227 TQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRG--FLARNLMY  304 (403)
T ss_dssp             EEEEEEEEEECTTCCTTSCCTTCCEEEEESSCCCCBTTBCCCBCCCGGGGGGSSTTCEEEEEESCTTSSS--CCCSBCEE
T ss_pred             eEEeEEEEEECCCCCCCCCCcccEEEEEeCCcCcCCCceecccCCCcccccccCCCCeEEEEcCCcCCCC--ccCcccEE
Confidence            56789999999999987 78999999999999999999999999976532   26788999999987654  24566777


Q ss_pred             ee---ccCCeEEEEeccc-----eeeccCe--------eeeecCCCCCCC--CC------ceEEEEeecccCc
Q psy15292         78 VS---ISNDVALIKIDKD-----VVFKQHI--------IPVCLPDQTVKL--VG------KSATVAGWGRTRH  126 (132)
Q Consensus        78 ~~---~~~d~c~~~~~~~-----~~~~~~v--------~~icl~~~~~~~--~g------~~~~v~gwg~~~~  126 (132)
                      +.   ++++.|...+...     ....+.+        ...|.++++.++  .+      ....|..||...+
T Consensus       305 ~~v~v~~~~~C~~~~~~~~~~~~~i~~~~~Cag~~~~~~~~C~GDSGGPL~~~~~~~~~~~l~GIvS~g~~~C  377 (403)
T 1zjk_A          305 VDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNC  377 (403)
T ss_dssp             EEEEEECHHHHHHHTTSSSCCSSCSCTTEEEECCSSCCTTSCSCSTTCEEEEEETTTTEEEEEEEEEEECSCC
T ss_pred             EEEeEeCHHHHhhhhhccccccCcCCCCeEeeccCCCCCCCCcCCCCccEEEEECCCCcEEEEEEEEECCCCC
Confidence            65   7777886544321     1111222        236777887776  21      3678889994333

>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2

Probab=99.77  E-value=1.1e-18  Score=110.93  Aligned_cols=119  Identities=21%  Similarity=0.393  Sum_probs=87.5

Q ss_pred             eEEeeeEEEeCCCC--CCCCCCCceEEEEeCCCeeeCCCeeeeeecCC-CCcccCCcEEEeccCccccCCCcccccceee
Q psy15292          2 FKLNTRQSFVHPQY--SPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQ-TVKLVGKSATVAGWGRTRHASSLSSAIPTYV   78 (132)
Q Consensus         2 ~~~~v~~~~~h~~y--~~~~~~~diall~l~~~~~~~~~~~~~cl~~~-~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~   78 (132)
                      +.+.|.++++||+|  +...+.+|||||+|++++.|+++++|+|||.. .....+..++++|||.+.... ..+..|+.+
T Consensus        70 ~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~-~~~~~L~~~  148 (241)
T 1m9u_A           70 QTANVDSYTMHENYGAGTASYSNDIAILHLATSISLGGNIQAAVLPANNNNDYAGTTCVISGWGRTDGTN-NLPDILQKS  148 (241)
T ss_dssp             EEEEEEEEEECTTTTCSSSTTTTCCEEEEESSCCCCCSSCCCCCCCSCSSCCCTTCEEEEEESSCSSSSS-CCCSBCEEE
T ss_pred             eEEEEEEEEeCCCcCCCCCcccccEEEEEecCccccCCCccccCcCCCcCCCCCCCEEEEEeCcccCCCC-CcccceeEe
Confidence            56789999999999  77778999999999999999999999999976 333378899999999886543 245667765


Q ss_pred             e---ccCCeEEEEeccce---eeccC--------eeeeecCCCCCCC--C-C--ceEEEEee
Q psy15292         79 S---ISNDVALIKIDKDV---VFKQH--------IIPVCLPDQTVKL--V-G--KSATVAGW  121 (132)
Q Consensus        79 ~---~~~d~c~~~~~~~~---~~~~~--------v~~icl~~~~~~~--~-g--~~~~v~gw  121 (132)
                      .   ++++.|...+....   .....        ....|.++++.++  . |  ....|..|
T Consensus       149 ~~~~~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~l~Gi~S~  210 (241)
T 1m9u_A          149 SIPVITTAQCTAAMVGVGGANIWDNHICVQDPAGNTGACNGDSGGPLNCPDGGTRVVGVTSW  210 (241)
T ss_dssp             EEEBCCHHHHHHHHTTSTTCCCCTTEEEECCTTSCCBCCTTCTTCEEEEESSSEEEEEEEEE
T ss_pred             eEEEEcHHHhhhhhcccCCCcccCCcEEECcCCCCCeeecCcCCccEEEeCCCEEEEEEEEE
Confidence            5   67777765332100   11111        2347888888777  3 3  57788888

>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*

Probab=99.77  E-value=1e-18  Score=117.30  Aligned_cols=121  Identities=26%  Similarity=0.440  Sum_probs=87.6

Q ss_pred             EEeeeEEEeCCCC------CCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccc
Q psy15292          3 KLNTRQSFVHPQY------SPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIP   75 (132)
Q Consensus         3 ~~~v~~~~~h~~y------~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l   75 (132)
                      .+.|.++++||+|      +...+.||||||+|++|+.|+++++|+|||...... .+..++++|||.+.... ..+..|
T Consensus       186 ~~~V~~i~~Hp~y~~~~~~~~~~~~nDIALlkL~~pv~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~-~~~~~L  264 (372)
T 1z8g_A          186 QLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYG-QQAGVL  264 (372)
T ss_dssp             EECEEEEEEETTCGGGTCTTCCCCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTS-CBCSBC
T ss_pred             EEEEEEEEECCCccccccCCCCCCCccEEEEEECCCCCCCCceeccccCCcccCCCCCCEEEEEecCCCCCCC-CCCcee
Confidence            5789999999999      677789999999999999999999999999765433 68899999999887554 245667


Q ss_pred             eeee---ccCCeEEEE--ec----cceeec---cCeeeeecCCCCCCC--CC--------ceEEEEeeccc
Q psy15292         76 TYVS---ISNDVALIK--ID----KDVVFK---QHIIPVCLPDQTVKL--VG--------KSATVAGWGRT  124 (132)
Q Consensus        76 ~~~~---~~~d~c~~~--~~----~~~~~~---~~v~~icl~~~~~~~--~g--------~~~~v~gwg~~  124 (132)
                      +++.   ++++.|...  +.    ......   ......|.++++.++  .+        ....|..||..
T Consensus       265 ~~~~v~ii~~~~C~~~~~~~~~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~~~~~~~~~~lvGIvS~G~~  335 (372)
T 1z8g_A          265 QEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTG  335 (372)
T ss_dssp             EEEEEEEECHHHHTSTTTTTTCCCTTEEEESCTTCSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBSS
T ss_pred             eEEEEEecChHHhCcchhcCCcCCCCeEeeecCCCCCcCCCCCCccceEeccCcCCCCCEEEEEEEEeCCC
Confidence            7655   677777532  11    111111   112346888888777  22        36889999963

>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*

Probab=99.77  E-value=2.3e-18  Score=109.83  Aligned_cols=123  Identities=20%  Similarity=0.298  Sum_probs=88.8

Q ss_pred             eEEeeeEEEeCCCCCC-CCCCCceEEEEeCCC----eeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccc
Q psy15292          2 FKLNTRQSFVHPQYSP-SDFRNDVALIKIDKD----VVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIP   75 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~-~~~~~diall~l~~~----~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l   75 (132)
                      +.+.|.+++.||+|+. ....+|||||+|.++    +.|+++++|+|||...... .+..++++|||.+.......+..|
T Consensus        68 ~~~~v~~i~~hp~y~~~~~~~~DiALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L  147 (248)
T 2r0l_A           68 QTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSL  147 (248)
T ss_dssp             EEECEEEEEECTTCCTTSTTTTCCEEEEECCSSSCSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCSCCSBC
T ss_pred             EEEeeeEEEeCCccCcCCCCCCCEEEEEeCCcccccccCCCcEEEEECCCCCCCCCCCCEEEEEEccccCCCCCCCCchh
Confidence            4678999999999988 778999999999999    7899999999999754433 688999999998876544345667


Q ss_pred             eeee---ccCCeEEEEeccceee-ccC--------eeeeecCCCCCCC--C--C--ceEEEEeeccc
Q psy15292         76 TYVS---ISNDVALIKIDKDVVF-KQH--------IIPVCLPDQTVKL--V--G--KSATVAGWGRT  124 (132)
Q Consensus        76 ~~~~---~~~d~c~~~~~~~~~~-~~~--------v~~icl~~~~~~~--~--g--~~~~v~gwg~~  124 (132)
                      +.+.   ++++.|.......... ...        ....|.++++.++  .  |  ....|..||..
T Consensus       148 ~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~  214 (248)
T 2r0l_A          148 REALVPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDG  214 (248)
T ss_dssp             EEEEEEBCCHHHHTSTTTTGGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEETTEEEEEEEEEECST
T ss_pred             eEEEEeeeCHHHhCCccccCCcCCCCEEeECCCCCCCcCCCCccCCeEEEEECCcEEEEEEEEeCCC
Confidence            7655   6677775321111111 111        2347888888777  2  3  47788999863

>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*

Probab=99.76  E-value=5e-19  Score=113.08  Aligned_cols=123  Identities=24%  Similarity=0.531  Sum_probs=87.6

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCC-----cccCCcEEEeccCccccCCCcc----c
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTV-----KLVGKSATVAGWGRTRHASSLS----S   72 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~-----~~~g~~~~~~GwG~~~~~~~~~----~   72 (132)
                      +.+.|.++++||+|+.....||||||+|++++.|+++++|+|||....     ...+..++++|||.+.......    .
T Consensus        67 ~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~  146 (250)
T 1aut_C           67 LDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQETLVTGWGYHSSREKEAKRNRT  146 (250)
T ss_dssp             EEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTTTSTTCEEEEEECCCCCSCCSCCCSSCS
T ss_pred             EEEEEEEEEECCCCCCCCCCCcEEEEEECCcccCCCceeeeEcCCCccccccccCCCCEEEEEEeCCCCCCCcccccccc
Confidence            467899999999999988999999999999999999999999986432     1268889999999876543221    1


Q ss_pred             ccceeee---ccCCeEEEEeccce----eec---cCeeeeecCCCCCCC----CCc--eEEEEeeccc
Q psy15292         73 AIPTYVS---ISNDVALIKIDKDV----VFK---QHIIPVCLPDQTVKL----VGK--SATVAGWGRT  124 (132)
Q Consensus        73 ~~l~~~~---~~~d~c~~~~~~~~----~~~---~~v~~icl~~~~~~~----~g~--~~~v~gwg~~  124 (132)
                      ..|+++.   ++++.|...+...+    ...   ......|.++++.++    .|.  ..+|..||..
T Consensus       147 ~~L~~~~~~i~~~~~C~~~~~~~~~~~~~Cag~~~~~~~~C~GDSGGPL~~~~~g~~~l~GI~S~g~~  214 (250)
T 1aut_C          147 FVLNFIKIPVVPHNECSEVMSNMVSENMLCAGILGDRQDACEGDSGGPMVASFHGTWFLVGLVSWGEG  214 (250)
T ss_dssp             SBCEEEEEEEECHHHHHHHCSSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSS
T ss_pred             ceeeEEEEEEecHHHhhHHhccCCCCCEEEeCCCCCCCCCCCCCCchheEEEECCeEEEEEEEEECCC
Confidence            3566655   66777754432211    111   112347888888777    232  6788899863

>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}

Probab=99.76  E-value=4.9e-19  Score=117.84  Aligned_cols=117  Identities=21%  Similarity=0.449  Sum_probs=86.7

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      +.+.|.++++||+|+    .||||||+|++++.|+++++|+|||.......+..++++|||.+....  .+..|+++.  
T Consensus       170 ~~~~V~~i~~HP~y~----~nDIALlkL~~~v~~~~~v~PicLp~~~~~~~g~~~~v~GWG~~~~~~--~s~~L~~~~v~  243 (347)
T 4f4o_C          170 QEVEIEKVIFHPDNS----TVDIGLIKLKQKVPVNERVMPICLPSKDYVNVGLVGYVSGWGRNANLN--FTEHLKYVMLP  243 (347)
T ss_dssp             EEECEEEEEECSCTT----TCCCEEEEESSCCCCSSSCCCCBCCSSCCCCTTCEEEEEECSBCTTSS--BCSSCEEEEEE
T ss_pred             EEEEEEEEEECcCCC----CCCEEEEEECCCccCCCceeeeecCccccCCCCcEEEEeccccCCCCC--CCccceEEEEE
Confidence            567899999999986    589999999999999999999999977655578899999999875542  466788766  


Q ss_pred             -ccCCeEEEEeccce---------------eec-cCee--------eeecCCCCCCC--CC------ceEEEEeeccc
Q psy15292         80 -ISNDVALIKIDKDV---------------VFK-QHII--------PVCLPDQTVKL--VG------KSATVAGWGRT  124 (132)
Q Consensus        80 -~~~d~c~~~~~~~~---------------~~~-~~v~--------~icl~~~~~~~--~g------~~~~v~gwg~~  124 (132)
                       ++++.|...+....               ..+ +.+|        ..|.+|++.++  .+      ...+|..||..
T Consensus       244 iv~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iCAG~~~~~~d~C~GDSGGPLv~~~~~~~~~~lvGIvS~G~~  321 (347)
T 4f4o_C          244 VADQEKCVQYYEGSTVPEKKTPKSPVGVQPILNEHTFCAGLSKYQEDTCYGDAGSAFAVHDKDDDTWYAAGILSFDKS  321 (347)
T ss_dssp             EECHHHHHHHHSSCSSGGGCCCCCSSSSCCCCSTTEEEECCCTTCCCCCTTCTTCEEEEEETTTTEEEEEEEEEECCC
T ss_pred             EeCHHHHHHHhccccccccccccccccccccccCCeEEecCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEEEeCCC
Confidence             77788865443210               111 2222        36788888776  22      26788899964

>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A

Probab=99.76  E-value=2.2e-18  Score=111.92  Aligned_cols=123  Identities=20%  Similarity=0.298  Sum_probs=89.1

Q ss_pred             eEEeeeEEEeCCCCCC-CCCCCceEEEEeCCC----eeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccc
Q psy15292          2 FKLNTRQSFVHPQYSP-SDFRNDVALIKIDKD----VVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIP   75 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~-~~~~~diall~l~~~----~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l   75 (132)
                      +.+.|.+++.||+|+. ....||||||+|+++    +.|+++++|+|||...... .+..++++|||.+.......+..|
T Consensus       103 ~~~~v~~i~~hp~y~~~~~~~~DIALl~L~~~~~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~L  182 (283)
T 1yc0_A          103 QTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSL  182 (283)
T ss_dssp             EEECEEEEEECTTCCTTSTTTTCCEEEEECCBTTBSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCSCCSBC
T ss_pred             EEEeeEEEEecCccccCCCCCCceEEEEeCCCccccccccCceeeeECCCCcCCCCCCCEEEEEEeCccCCCCCccCchh
Confidence            4678999999999988 778999999999999    8899999999999754433 688999999998876544345667


Q ss_pred             eeee---ccCCeEEEEeccceee-ccC--------eeeeecCCCCCCC--C--C--ceEEEEeeccc
Q psy15292         76 TYVS---ISNDVALIKIDKDVVF-KQH--------IIPVCLPDQTVKL--V--G--KSATVAGWGRT  124 (132)
Q Consensus        76 ~~~~---~~~d~c~~~~~~~~~~-~~~--------v~~icl~~~~~~~--~--g--~~~~v~gwg~~  124 (132)
                      +.+.   ++++.|.........+ ...        ....|.++++.++  .  |  ...+|..||..
T Consensus       183 ~~~~v~i~~~~~C~~~~~~~~~~~~~~iCa~~~~~~~~~C~GDSGgPL~~~~~g~~~l~GIvS~g~~  249 (283)
T 1yc0_A          183 REALVPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDG  249 (283)
T ss_dssp             EEEEEEBCCHHHHTSTTTTGGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEETTEEEEEEEEEECST
T ss_pred             eEeEEEEECHHHhcCccccCCcCCCCEEeeCCCCCCCccCCCCCCCceEEEECCcEEEEEEEEECCC
Confidence            7655   6777775321111111 111        2347888888777  2  3  37789999963

>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}

Probab=99.76  E-value=8.2e-19  Score=110.96  Aligned_cols=122  Identities=16%  Similarity=0.196  Sum_probs=93.6

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCC-CeeeeeecCCCCc-ccCCcEEEeccCccccCCCcccccceeee
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQ-HIIPVCLPDQTVK-LVGKSATVAGWGRTRHASSLSSAIPTYVS   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~-~~~~~cl~~~~~~-~~g~~~~~~GwG~~~~~~~~~~~~l~~~~   79 (132)
                      +.+.|.++++| +|+.....+|||||+|.+++.+++ .++|+|||..... ..+..++++|||.+.......+..|+.+.
T Consensus        65 ~~~~v~~i~~h-~y~~~~~~~DiAll~L~~~v~~~~~~v~pi~Lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~  143 (235)
T 3h7t_A           65 TSVMAKKIYIV-RYHPLTMQNNYAVIETEMPIKLDDKTTKKIELPSLLYDPEPDTSVLVSGWGSTNFKSLEYSGDLMEAN  143 (235)
T ss_dssp             EEEEEEEEEEC-SCBTTTTBTCCEEEEESSCCCCCSSSCCCCBCCCTTCCCCTTCEEEEEECCCSSTTCCCCCSBCEEEE
T ss_pred             ceeeeeeEEee-ecCCCCCCCCeEEEEeccccccCCccccceecCccccCCCCCCeEEEEecCCCCCCCCchhHHHhhCC
Confidence            45789999999 999999999999999999999999 9999999977632 37889999999998766434566777665


Q ss_pred             ---ccCCeEEEEeccc----eeeccC--------eeeeecCCCCCCC--CCceEEEEeeccc
Q psy15292         80 ---ISNDVALIKIDKD----VVFKQH--------IIPVCLPDQTVKL--VGKSATVAGWGRT  124 (132)
Q Consensus        80 ---~~~d~c~~~~~~~----~~~~~~--------v~~icl~~~~~~~--~g~~~~v~gwg~~  124 (132)
                         ++++.|...+...    ......        -...|.++++.++  .+....|..||..
T Consensus       144 ~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~l~Gi~S~g~~  205 (235)
T 3h7t_A          144 FTVVDRKSCEEQYKQIEADKYIYDGVFCAGGEYDETYIGYGDAGDPAVQNGTLVGVASYISS  205 (235)
T ss_dssp             EEEECHHHHHHHHHTTTCGGGCSTTEEEECBTTTTBBCCTTCTTCEEEETTEEEEEECCCTT
T ss_pred             CceeCHHHHHHHhhhcccCccccCCeEecCCCCCCCccccCCCCCceeeCCeEEEEEEecCC
Confidence               7777776554321    011122        2347888888877  7888999999965

>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A

Probab=99.76  E-value=6.2e-19  Score=111.36  Aligned_cols=117  Identities=27%  Similarity=0.447  Sum_probs=86.0

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCC---cccCCcEEEeccCccccCCCcccccceee
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTV---KLVGKSATVAGWGRTRHASSLSSAIPTYV   78 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~---~~~g~~~~~~GwG~~~~~~~~~~~~l~~~   78 (132)
                      +.+.+.++++||+|+...+.||||||+|+ ++.+++.++|+|||....   ...+..++++|||.+....    ..+++.
T Consensus        67 ~~~~v~~i~~hp~y~~~~~~~DiALl~L~-~~~~~~~v~picLp~~~~~~~~~~~~~~~v~GwG~~~~~~----~~l~~~  141 (230)
T 2hlc_A           67 AVVNSERIISHSMFNPDTYLNDVALIKIP-HVEYTDNIQPIRLPSGEELNNKFENIWATVSGWGQSNTDT----VILQYT  141 (230)
T ss_dssp             EEEECSEEEECTTCBTTTTBTCCEEEECS-CCCCCSSCCCCBCCCGGGGGCCCTTCEEEEEESSCCSSCC----CBCEEE
T ss_pred             eEEEEEEEEECCCCCCCCccccEEEEEec-CCCcCCcEeeeEcCCccccccccCCcEEEEEeeeecCCCC----ceeEEE
Confidence            45788999999999998999999999999 999999999999997652   2367889999999876542    345554


Q ss_pred             e---ccCCeEEEEeccceeeccCe-------eeeecCCCCCCC--CC--ceEEEEeecc
Q psy15292         79 S---ISNDVALIKIDKDVVFKQHI-------IPVCLPDQTVKL--VG--KSATVAGWGR  123 (132)
Q Consensus        79 ~---~~~d~c~~~~~~~~~~~~~v-------~~icl~~~~~~~--~g--~~~~v~gwg~  123 (132)
                      .   ++++.|...+.........+       ...|.++++.++  .+  ....|..||.
T Consensus       142 ~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPl~~~~~~~l~Gi~S~g~  200 (230)
T 2hlc_A          142 YNLVIDNDRCAQEYPPGIIVESTICGDTSDGKSPCFGDSGGPFVLSDKNLLIGVVSFVS  200 (230)
T ss_dssp             EEEEECHHHHHTTSCTTSSCTTEEEECCTTSCBCCTTCTTCEEEEGGGTEEEEEEEECC
T ss_pred             EEEEeCHHHhhhhhCCCcccCCeEEecCCCCCCcCCCCCCCeeEECcCCEEEEEEEEeC
Confidence            4   66677754432211111222       347888888777  33  6889999986

>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B

Probab=99.75  E-value=1.7e-18  Score=103.06  Aligned_cols=111  Identities=18%  Similarity=0.315  Sum_probs=80.8

Q ss_pred             CCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCC--cccccceeee---ccCCeEEEEe
Q psy15292         15 YSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS--LSSAIPTYVS---ISNDVALIKI   89 (132)
Q Consensus        15 y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~--~~~~~l~~~~---~~~d~c~~~~   89 (132)
                      ++...+.||||||+|++++.|+++++|+|||..... .+..++++|||.+.....  ..+..|+++.   ++++.|...+
T Consensus         1 ~d~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~v~GWG~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~   79 (152)
T 2pka_B            1 ADGKDYSHDLMLLRLQSPAKITDAVKVLELPTQEPE-LGSTCEASGWGSIEPGPDDFEFPDEIQCVQLTLLQNTFCADAH   79 (152)
T ss_dssp             CCCSBCTTCCEEEEESSCCCCCSSCCCCCCCSSCCC-TTCEEEEEESSCSSCCSSCCCCCSBCEEEEEEEECHHHHHHHC
T ss_pred             CCCCCCCCCEEEEEECCCCcCCCCEEeEECCCCCCC-CCCEEEEEecccccCCCCcCCCCccceEEEeEEcCHHHhhhhh
Confidence            355678899999999999999999999999976653 688999999999876542  3456777765   7777786544


Q ss_pred             ccce----eec---cCeeeeecCCCCCCC--CCceEEEEeecccCc
Q psy15292         90 DKDV----VFK---QHIIPVCLPDQTVKL--VGKSATVAGWGRTRH  126 (132)
Q Consensus        90 ~~~~----~~~---~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~  126 (132)
                      ...+    ...   ......|.++++.++  .|....|..||...+
T Consensus        80 ~~~~~~~~iCa~~~~~~~~~C~GDsGgPL~~~g~l~Gi~S~g~~~C  125 (152)
T 2pka_B           80 PDKVTESMLCAGYLPGGKDTCMGDSGGPLICNGMWQGITSWGHTPC  125 (152)
T ss_dssp             SSBCCTTEEEEECTTSSCBCCTTCTTCEEEETTEEEEEECCCCSST
T ss_pred             cCCCCCCEEeeccCCCCCcccCCccccceEECCEEEEEEecCCCCC
Confidence            2211    111   112346888888877  688899999994333

>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...

Probab=99.75  E-value=1.1e-18  Score=111.69  Aligned_cols=122  Identities=20%  Similarity=0.393  Sum_probs=87.6

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCC----cccCCcEEEeccCccccCCCccccccee
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTV----KLVGKSATVAGWGRTRHASSLSSAIPTY   77 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~----~~~g~~~~~~GwG~~~~~~~~~~~~l~~   77 (132)
                      +.+.|.++++||+|+.....||||||+|++++.|+++++|+|||....    ...+..++++|||.+..... .+..+++
T Consensus        69 ~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~-~~~~l~~  147 (254)
T 2bz6_H           69 QSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGA-TALELMV  147 (254)
T ss_dssp             EEEEEEEEEEETTCCTTSCSSCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSSTTSC-BCSBCEE
T ss_pred             EEEEEEEEEECCCCCCCCCcCcEEEEEECCccccCCCccceECCCCccccccccCCCcEEEEeCcccCCCCC-CChhhee
Confidence            467899999999999989999999999999999999999999986542    12578899999998765432 3556666


Q ss_pred             ee---ccCCeEEEEeccc---eee-ccC--------eeeeecCCCCCCC----CC--ceEEEEeeccc
Q psy15292         78 VS---ISNDVALIKIDKD---VVF-KQH--------IIPVCLPDQTVKL----VG--KSATVAGWGRT  124 (132)
Q Consensus        78 ~~---~~~d~c~~~~~~~---~~~-~~~--------v~~icl~~~~~~~----~g--~~~~v~gwg~~  124 (132)
                      +.   ++++.|...+...   ... ...        ....|.++++.++    .|  ....|..||..
T Consensus       148 ~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~g~~~l~GI~S~g~~  215 (254)
T 2bz6_H          148 LNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPHATHYRGTWYLTGIVSWGQG  215 (254)
T ss_dssp             EEEEEECHHHHHHHSCCCTTCCCCCTTEEEESCSSSSCBCCGGGTTCEEEEEETTEEEEEEEEEECSS
T ss_pred             eeeeeecHHHHhhhhhccccCCccCCCEEeecCCCCCCccccccCCCceEEeECCEEEEEEEEEECCC
Confidence            54   6667775433220   011 111        2346888887776    13  36788899864

>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*

Probab=99.75  E-value=7.8e-18  Score=106.00  Aligned_cols=120  Identities=23%  Similarity=0.353  Sum_probs=91.1

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.+++.| +|+.....||||||+|++++.++++++|+|||...... .+..++++|||.+..... ....++.+. 
T Consensus        69 ~~~~v~~i~~h-~y~~~~~~~DIALl~L~~~~~~~~~v~pi~L~~~~~~~~~~~~~~v~GwG~~~~~~~-~~~~l~~~~~  146 (225)
T 1a7s_A           69 QTFSISSMSEN-GYDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGR-LSRFPRFVNV  146 (225)
T ss_dssp             EEEEEEEEECS-SCBTTTTBSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESCCSSTTCC-CCSSCEEEEE
T ss_pred             eEEeEEEEecc-cccCCCCcCCEEEEEcCCcccCCCceeEEEcCCCcCCCCCCCEEEEEeCCcCCCCCC-cccccceeee
Confidence            57789999999 99998899999999999999999999999999766532 788999999998765432 355666655 


Q ss_pred             --ccCCeEEEEeccceee--ccCeeeeecCCCCCCC--CCceEEEEeecccCc
Q psy15292         80 --ISNDVALIKIDKDVVF--KQHIIPVCLPDQTVKL--VGKSATVAGWGRTRH  126 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~~--~~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~  126 (132)
                        ++++.|..   ..+-.  ...-...|.++++.++  .|....|..||...+
T Consensus       147 ~~~~~~~C~~---~~~Ca~~~~~~~~~C~GDSGgPl~~~g~l~Gi~S~g~~~C  196 (225)
T 1a7s_A          147 TVTPEDQCRP---NNVCTGVLTRRGGICNGDGGTPLVCEGLAHGVASFSLGPC  196 (225)
T ss_dssp             EECCGGGSCT---TEEEEECSSSSCBCCTTCTTCEEEETTEEEEEEEEECSST
T ss_pred             EECCHHHhcc---CceEEeccCCCCCcccCCCcchheeCCEEEEEEEEccCCc
Confidence              66677743   11111  1123468999998887  688999999995433

>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0

Probab=99.75  E-value=1.1e-18  Score=109.99  Aligned_cols=122  Identities=16%  Similarity=0.191  Sum_probs=92.4

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCC-CeeeeeecCCCCc-ccCCcEEEeccCccccCCCcccccceeee
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQ-HIIPVCLPDQTVK-LVGKSATVAGWGRTRHASSLSSAIPTYVS   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~-~~~~~cl~~~~~~-~~g~~~~~~GwG~~~~~~~~~~~~l~~~~   79 (132)
                      +.+.|.+++.| +|+.....||||||+|++|+.+++ .++|+|||..... ..+..++++|||.+.... .....|+.+.
T Consensus        69 ~~~~v~~i~~h-~y~~~~~~~DIALl~L~~~v~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~-~~~~~L~~~~  146 (228)
T 3h7o_A           69 SDPYVSHVYLS-FYRQETMENDIAILELSRPLKLDGLKSKPAKLPDIEFRPKTGSDVLVSGYGDGQTMD-PKDHDLKSAQ  146 (228)
T ss_dssp             EECCEEEEEES-SCBTTTTBTCCEEEEESSCCCCCSSSSCCCBCCCTTCCCCTTCEEEEEECCCSSCSC-GGGGBCEEEE
T ss_pred             eeeeEEEEEcc-ccCCCCccCCEEEEEECCcccccccccccccCCccccCCCCCCeeEEEEEecCCCCC-Ccccccccce
Confidence            35678899999 999999999999999999999999 9999999977642 378899999999876654 3456677665


Q ss_pred             ---ccCCeEEEEeccceeeccCe------eeeecCCCCCCC--CCceEEEEeecccC
Q psy15292         80 ---ISNDVALIKIDKDVVFKQHI------IPVCLPDQTVKL--VGKSATVAGWGRTR  125 (132)
Q Consensus        80 ---~~~d~c~~~~~~~~~~~~~v------~~icl~~~~~~~--~g~~~~v~gwg~~~  125 (132)
                         ++++.|...+.........+      ...|.++++.++  .+....|..||...
T Consensus       147 ~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~C~GDsGgPl~~~~~l~Gi~S~g~~c  203 (228)
T 3h7o_A          147 LTVVDLDECRTKYGPIFLSLQVFCAQKVGVSLESGDAGDPTVQQDTLVGVAAYFPKR  203 (228)
T ss_dssp             EEEECHHHHHHHHTTSCCCSSEEEEECTTCCCCGGGTTCEEEETTEEEEEECCCTTC
T ss_pred             eEEEcHHHHHHHhcCccCCceEEecCCCCCcCCCCCCCCcceecCeEEEEEeecCcC
Confidence               77777866544321112222      346888888877  78889999998653

>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2

Probab=99.75  E-value=1.9e-18  Score=109.79  Aligned_cols=119  Identities=20%  Similarity=0.408  Sum_probs=86.1

Q ss_pred             EEeeeEEEeCCCCCCC---CCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceee
Q psy15292          3 KLNTRQSFVHPQYSPS---DFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYV   78 (132)
Q Consensus         3 ~~~v~~~~~h~~y~~~---~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~   78 (132)
                      .+.|.++++||+|+..   .+.||||||+|++++.|+++++|+|||...... .+..++++|||.+...   .+..|+++
T Consensus        71 ~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~---~~~~L~~~  147 (242)
T 2qy0_B           71 NHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEK---IAHDLRFV  147 (242)
T ss_dssp             CCCEEEEEECTTCCTTCSSCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCCCSSS---CCSBCEEE
T ss_pred             ceeEEEEEECCCCccCcCCCCCCcEEEEEECCCCcCCCCcceeecCCCccccCCCCeEEEEeeccCCCc---CCccceEE
Confidence            4578999999999865   678999999999999999999999999765432 6888999999987653   34556665


Q ss_pred             e---ccCCeEEEEecc---------ceeec---cCeeeeecCCCCCCC--C-C-----ceEEEEeeccc
Q psy15292         79 S---ISNDVALIKIDK---------DVVFK---QHIIPVCLPDQTVKL--V-G-----KSATVAGWGRT  124 (132)
Q Consensus        79 ~---~~~d~c~~~~~~---------~~~~~---~~v~~icl~~~~~~~--~-g-----~~~~v~gwg~~  124 (132)
                      .   ++++.|...+..         .....   ......|.++++.++  . +     ....|..||..
T Consensus       148 ~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~~~~~~~l~Gi~S~g~~  216 (242)
T 2qy0_B          148 RLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIG  216 (242)
T ss_dssp             EEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSS
T ss_pred             EEEEeCHHHHHHHhccccccccCCCCEEeccCCCCCCccccCCCCCcEEEEECCCCeEEEEEEEEECCC
Confidence            5   667777643321         11111   112357888888776  2 2     37889999963

>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*

Probab=99.74  E-value=2.1e-18  Score=109.23  Aligned_cols=122  Identities=22%  Similarity=0.429  Sum_probs=87.6

Q ss_pred             eEEeeeEEEeCCCCCC--CCCCCceEEEEeCCCeeeCCCeeeeeecCCCCc---ccCCcEEEeccCccccCCCcccccce
Q psy15292          2 FKLNTRQSFVHPQYSP--SDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK---LVGKSATVAGWGRTRHASSLSSAIPT   76 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~--~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~---~~g~~~~~~GwG~~~~~~~~~~~~l~   76 (132)
                      +.+.|.++++||+|+.  ..+.||||||+|++|+.++++++|+|||.....   ..+..++++|||.+..... .+..|+
T Consensus        66 ~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~~~v~GwG~~~~~~~-~~~~l~  144 (235)
T 2wph_S           66 QKRNVIRIIPHHNFNAAINTYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGR-SALVLQ  144 (235)
T ss_dssp             EEEEEEEEEECTTTTSSSSCCTTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHHHTCEEEEEESSBSSTTSC-BCSBCE
T ss_pred             EEeeeEEEEeCCCCcccCCcCCCCEEEEEECCcCcCCCCccccCCCCCcccccccCCccEEEEeCCCccCCCC-ccchhe
Confidence            4678999999999988  678899999999999999999999999865432   2577899999998765432 355677


Q ss_pred             eee---ccCCeEEEEeccce----eec---cCeeeeecCCCCCCC----CC--ceEEEEeeccc
Q psy15292         77 YVS---ISNDVALIKIDKDV----VFK---QHIIPVCLPDQTVKL----VG--KSATVAGWGRT  124 (132)
Q Consensus        77 ~~~---~~~d~c~~~~~~~~----~~~---~~v~~icl~~~~~~~----~g--~~~~v~gwg~~  124 (132)
                      ++.   ++++.|...+...+    -..   ......|.++++.++    .|  ....|..||..
T Consensus       145 ~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~  208 (235)
T 2wph_S          145 YLRVPLVDRATCLRSTKFTITNNMFCAGFHEGGRDSCQGDSGGPHVTEVEGTSFLTGIISWGEE  208 (235)
T ss_dssp             EEEEEEECHHHHHHTCSSCCCTTEEEESCTTCSCBCCTTCTTCEEEEEETTEEEEEEEEEECSS
T ss_pred             EeeeeeeCHHHhcCcccCCCCCCEEEeCCCCCCCccCCCCCCCceEEeECCeEEEEEEEEECCC
Confidence            655   67777754332111    110   112347888888776    12  36788999863

>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...

Probab=99.74  E-value=1.4e-18  Score=111.33  Aligned_cols=120  Identities=23%  Similarity=0.461  Sum_probs=84.1

Q ss_pred             EeeeEEEeCCCCC-CCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCc----ccCCcEEEeccCccccCCC-----cccc
Q psy15292          4 LNTRQSFVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGWGRTRHASS-----LSSA   73 (132)
Q Consensus         4 ~~v~~~~~h~~y~-~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~----~~g~~~~~~GwG~~~~~~~-----~~~~   73 (132)
                      ..|.++++||+|+ ...+.||||||+|++++.++++++|+|||.....    ..+..++++|||.+.....     ..+.
T Consensus        79 ~~v~~i~~hp~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~  158 (259)
T 3rm2_H           79 SMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS  158 (259)
T ss_dssp             EEEEEEEECTTCBTTTTCBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESCCSSCC-------CCCS
T ss_pred             eEEEEEEECCCCCCCCCCCCcEEEEEeCCceEcCCCcccccCCCccccccccCCCCEEEEeecCCCcCcCCccccccccc
Confidence            4589999999998 5678899999999999999999999999875432    2588899999998754321     1145


Q ss_pred             cceeee---ccCCeEEEEeccceeeccCe-----------eeeecCCCCCCC--CC------ceEEEEeeccc
Q psy15292         74 IPTYVS---ISNDVALIKIDKDVVFKQHI-----------IPVCLPDQTVKL--VG------KSATVAGWGRT  124 (132)
Q Consensus        74 ~l~~~~---~~~d~c~~~~~~~~~~~~~v-----------~~icl~~~~~~~--~g------~~~~v~gwg~~  124 (132)
                      .++.+.   ++++.|...+...+ ....+           ...|.++++.++  .+      ....|..||..
T Consensus       159 ~l~~~~~~~~~~~~C~~~~~~~~-~~~~~Cag~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~GI~S~g~~  230 (259)
T 3rm2_H          159 VLQVVNLPIVERPVCKDSTRIRI-TDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEG  230 (259)
T ss_dssp             BCEEEEEEBCCHHHHHHTCSSCC-CTTEEEECCCGGGSCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSS
T ss_pred             cceEEEEEEeCHHHhhhhhcccC-CCceEeeeccCCCCCCCcccCCCCCCeeEEEECCCCCEEEEEEEEECCC
Confidence            566655   66666754332111 01112           257888888776  33      46889999954

>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*

Probab=99.74  E-value=1.7e-18  Score=114.63  Aligned_cols=119  Identities=23%  Similarity=0.441  Sum_probs=86.3

Q ss_pred             EEeeeEEEeCCCCCCC---CCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceee
Q psy15292          3 KLNTRQSFVHPQYSPS---DFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYV   78 (132)
Q Consensus         3 ~~~v~~~~~h~~y~~~---~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~   78 (132)
                      .+.|.++++||+|+..   .+.||||||+|++++.|+++++|||||...... .+..++++|||.+...   .+..|+++
T Consensus       160 ~~~V~~i~~Hp~y~~~~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~---~~~~L~~~  236 (329)
T 1md8_A          160 NHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEK---IAHDLRFV  236 (329)
T ss_dssp             CCCEEEEEECSSCCSSCTTCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCBCSSS---BCSBCEEE
T ss_pred             ceeeEEEEECCCcccccCCCCCccEEEEEECCcccCCCceEccccCCCccccCCCCEEEEEeCCCCCCC---CCccceEE
Confidence            4578999999999864   678999999999999999999999999765432 6788999999987643   35567766


Q ss_pred             e---ccCCeEEEEeccc---eeec-cC--------eeeeecCCCCCCC-C--C-----ceEEEEeeccc
Q psy15292         79 S---ISNDVALIKIDKD---VVFK-QH--------IIPVCLPDQTVKL-V--G-----KSATVAGWGRT  124 (132)
Q Consensus        79 ~---~~~d~c~~~~~~~---~~~~-~~--------v~~icl~~~~~~~-~--g-----~~~~v~gwg~~  124 (132)
                      .   ++++.|...+...   ..++ +.        ....|.++++.++ -  +     ....|..||..
T Consensus       237 ~v~i~~~~~C~~~~~~~~~~~~~~~~~iCAg~~~~~~d~C~GDSGGPL~~~~~~~~~~~l~GIvS~G~~  305 (329)
T 1md8_A          237 RLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIG  305 (329)
T ss_dssp             EEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCTTCSCBCCTTTTTCEEEEEETTTTEEEEEEEEEECSS
T ss_pred             EEEEcCHHHHHHHhhcccccccCCCCeEeeecCCCCCcCCCCccccceEEEECCCCcEEEEEEEEECCC
Confidence            5   6777786433210   0111 11        2347888888776 2  2     36788999863

>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2

Probab=99.74  E-value=1.8e-17  Score=104.02  Aligned_cols=119  Identities=17%  Similarity=0.258  Sum_probs=87.2

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCc-ccCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK-LVGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~-~~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.+++.| +|+.....+|||||+|++++.++++++|+|||..... ..+..++++|||.+..... ....++... 
T Consensus        71 ~~~~v~~i~~h-~y~~~~~~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~~~GwG~~~~~~~-~~~~l~~~~~  148 (221)
T 1fuj_A           71 QHFSVAQVFLN-NYDAENKLNDILLIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDP-PAQVLQELNV  148 (221)
T ss_dssp             EEEEEEEEEEC-CCBTTTTBCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSCSSSC-BCSBCEEEEE
T ss_pred             EEEEEEEEEeC-CCCCCCCcccEEEEEeCCccccCCcceeeECCCCcCCCCCCCEEEEEEeCCCCCCCC-HHHHhhcccc
Confidence            56789999999 9999889999999999999999999999999976643 2688999999998765432 355566655 


Q ss_pred             -ccCCeEEEEeccceeeccCeeeeecCCCCCCC--CCceEEEEeecc
Q psy15292         80 -ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL--VGKSATVAGWGR  123 (132)
Q Consensus        80 -~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~--~g~~~~v~gwg~  123 (132)
                       +.++.|....-. ..........|.++++.++  .|....|.+|+.
T Consensus       149 ~~~~~~C~~~~~C-a~~~~~~~~~C~GDSGgPL~~~~~l~Gi~s~~~  194 (221)
T 1fuj_A          149 TVVTFFCRPHNIC-TFVPRRKAGICFGDSGGPLICDGIIQGIDSFVI  194 (221)
T ss_dssp             EEECTTCCTTEEE-EECSSSSCBCCTTCTTCEEEETTEEEEEEEECS
T ss_pred             eEEeeecCCceee-eccCCCCCCCCCCCCCCeeEECCEEeEEEEEec
Confidence             225555321000 0011123457999998887  788889999943

>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...

Probab=99.74  E-value=2.6e-18  Score=109.17  Aligned_cols=122  Identities=16%  Similarity=0.349  Sum_probs=87.7

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCC----cccCCcEEEeccCccccCCCccccccee
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTV----KLVGKSATVAGWGRTRHASSLSSAIPTY   77 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~----~~~g~~~~~~GwG~~~~~~~~~~~~l~~   77 (132)
                      +.+.|.++++||+|+...+.+|||||+|++++.|+++++|+|||....    ...+..++++|||.+..... ....|+.
T Consensus        67 ~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~-~~~~L~~  145 (241)
T 2jkh_A           67 AVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGE-QSTRLKM  145 (241)
T ss_dssp             EEECEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHTTTSSEEEEEESCBSSTTSC-BCSBCEE
T ss_pred             EEEEeEEEEeCCCCCCCCCCCcEEEEEECCcccCCCCEeeeEcCCCCcccccccCCCeEEEEecCCCCCCCC-cCccccE
Confidence            467899999999999988999999999999999999999999987542    12578899999998765432 3555666


Q ss_pred             ee---ccCCeEEEEeccc----eee---ccCeeeeecCCCCCCC----CC--ceEEEEeeccc
Q psy15292         78 VS---ISNDVALIKIDKD----VVF---KQHIIPVCLPDQTVKL----VG--KSATVAGWGRT  124 (132)
Q Consensus        78 ~~---~~~d~c~~~~~~~----~~~---~~~v~~icl~~~~~~~----~g--~~~~v~gwg~~  124 (132)
                      +.   ++++.|...+...    .-.   .......|.++++.++    .|  ....|..||..
T Consensus       146 ~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~  208 (241)
T 2jkh_A          146 LEVPYVDRNSCKLSSSFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEG  208 (241)
T ss_dssp             EEEEEECHHHHHHHCSSCCCTTEEEESCSSSSCBCCTTTTTCEEEEEETTEEEEEEEEEECSS
T ss_pred             eeeccccHHHhcccccCcCCCCeEEeeCCCCCCccCcCcCCCeeEEEECCEEEEEEEEEECCC
Confidence            54   6667775433211    111   0112347888888776    13  36788899863

>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1

Probab=99.73  E-value=3.9e-18  Score=113.03  Aligned_cols=116  Identities=23%  Similarity=0.458  Sum_probs=82.3

Q ss_pred             eeEEEeCCCCCC-------CCCCCceEEEEeCCCeeeCCCeeeeeecCCCCc---ccCCcEEEeccCccccCCCcccccc
Q psy15292          6 TRQSFVHPQYSP-------SDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK---LVGKSATVAGWGRTRHASSLSSAIP   75 (132)
Q Consensus         6 v~~~~~h~~y~~-------~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~---~~g~~~~~~GwG~~~~~~~~~~~~l   75 (132)
                      +.++++||+|+.       ..+.||||||+|++++.|+++++|||||.....   ..+..++++|||.+...  ..+..|
T Consensus       150 v~~i~~Hp~y~~~~~~~~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~g~~~~v~GWG~t~~~--~~~~~L  227 (333)
T 1elv_A          150 PEHVFIHPGWKLLAVPEGRTNFDNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKR--DRAVRL  227 (333)
T ss_dssp             EEEEEECTTSCCCSSCTTCCCCTTCCEEEEESSCCCCBTTBCCCBCCCSSGGGCCCTTCEEEEEESCCCSSC--SSCSBC
T ss_pred             cceEEECCCCcccccccccCCCcceEEEEEeCCCCcCCCcccceecCCCcccccccCCcEEEEEECcCcCCC--CcCcee
Confidence            399999999984       568899999999999999999999999976532   25888999999987654  235567


Q ss_pred             eeee---ccCCeEEEEeccc-------eeec-cCee-------eeecCCCCCCC--C----C---ceEEEEeecc
Q psy15292         76 TYVS---ISNDVALIKIDKD-------VVFK-QHII-------PVCLPDQTVKL--V----G---KSATVAGWGR  123 (132)
Q Consensus        76 ~~~~---~~~d~c~~~~~~~-------~~~~-~~v~-------~icl~~~~~~~--~----g---~~~~v~gwg~  123 (132)
                      +++.   ++++.|...+...       ..+. +.+|       ..|.++++.++  .    +   ...+|..||.
T Consensus       228 ~~~~v~v~~~~~C~~~~~~~~~~~~~~~~~~~~~~Cag~~~~~~~C~GDSGGPL~~~~~~~~~~~~l~GIvS~g~  302 (333)
T 1elv_A          228 KAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMICAGGEKGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGP  302 (333)
T ss_dssp             EEEEEEEECHHHHHTC----------CCCCCTTEEEEECSTTCBCCTTCTTCEEEEECSSCTTCEEEEEEEEECS
T ss_pred             EEEEEEEEcHHHhhhhhhcccccccccccCCCCeECccCCCCCCcCcCcCCCceEEEECCCCcEEEEEEEEeeCC
Confidence            7665   6677775433211       1111 2222       36888888776  2    2   2678888985

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=99.73  E-value=1.2e-18  Score=113.26  Aligned_cols=119  Identities=15%  Similarity=0.226  Sum_probs=81.1

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCC----CcccCCcEEEeccCccccCCCccccccee
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQT----VKLVGKSATVAGWGRTRHASSLSSAIPTY   77 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~----~~~~g~~~~~~GwG~~~~~~~~~~~~l~~   77 (132)
                      +.+.|.++++||+|+...+.||||||+|.+|+.|+++++|+|||...    ....+..++++|||..  . ...+..|++
T Consensus       116 ~~~~v~~i~~Hp~y~~~~~~nDIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~--~-~~~~~~L~~  192 (283)
T 3f1s_B          116 LMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARN--G-TDLGNSLTT  192 (283)
T ss_dssp             EEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCTTTTCCCCBCCCHHHHHHTTTTTSCEEEEECBCC----------CEE
T ss_pred             EEEEeEEEEECCCCCCCCCCCCEEEEEeCCcccCCCCEEeEECCCCccccccccCCCEEEEEECCCC--C-CCCCceeeE
Confidence            56789999999999999999999999999999999999999999764    2236888999999982  2 234566776


Q ss_pred             ee---ccCCeEEEEeccceeeccCeee-----eecCCCCCCC----CCc--eEEEEeeccc
Q psy15292         78 VS---ISNDVALIKIDKDVVFKQHIIP-----VCLPDQTVKL----VGK--SATVAGWGRT  124 (132)
Q Consensus        78 ~~---~~~d~c~~~~~~~~~~~~~v~~-----icl~~~~~~~----~g~--~~~v~gwg~~  124 (132)
                      +.   ++++.|...+...+ ..+.+|.     .+.++++.++    .|.  ..+|.+||..
T Consensus       193 ~~v~~~~~~~C~~~~~~~~-~~~~~Ca~~~~~~~~gDSGgPlv~~~~~~~~l~GIvS~g~c  252 (283)
T 3f1s_B          193 RPVTLVEGEECGQVLNVTV-TTRTYCERSSVAAMHWMDGSVVTREHRGSWFLTGVLGSQPV  252 (283)
T ss_dssp             EEEEEECHHHHHHHHTSCC-CTTEEEEECSSCGGGBCTTCEEEEECSSCEEEEEEECCCSG
T ss_pred             EEEeEeCHHHHhhhhcCCC-CCCeEcccCCCCCCCCCCCCcEEEEECCEEEEEEEEEeCCC
Confidence            65   66777765443211 1222221     2334666665    232  6778888753

>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A

Probab=99.73  E-value=1.8e-18  Score=122.70  Aligned_cols=121  Identities=18%  Similarity=0.365  Sum_probs=82.7

Q ss_pred             EEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCc-ccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          3 KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK-LVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         3 ~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~-~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      .+.|.++++||+|+.....||||||+|++++.++++++|||||..... ..+..++++|||.+..... .+..|+.+.  
T Consensus       460 ~~~V~~ii~Hp~y~~~~~~nDIALlkL~~pv~~~~~v~PicLp~~~~~~~~~~~~~v~GWG~~~~~~~-~s~~L~~~~v~  538 (625)
T 2f83_A          460 FFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDK-IQNTLQKAKIP  538 (625)
T ss_dssp             CEEEEEEEECTTCCBTTTBCCCEEEEESSCCCCBTTBCCCBCCCGGGTTCCCCCEEECBCC------C-CCSBCBCCEEC
T ss_pred             EEeEEEEEECCccCcCCccccEEEEEECCcccCCCceeeeEcCCccCCccCCCEEEEEEecCCCCCCc-CCcccEEEEEE
Confidence            467999999999999889999999999999999999999999976543 2578899999998765432 355666655  


Q ss_pred             -ccCCeEEEEeccceeeccC--------eeeeecCCCCCCC----CC--ceEEEEeeccc
Q psy15292         80 -ISNDVALIKIDKDVVFKQH--------IIPVCLPDQTVKL----VG--KSATVAGWGRT  124 (132)
Q Consensus        80 -~~~d~c~~~~~~~~~~~~~--------v~~icl~~~~~~~----~g--~~~~v~gwg~~  124 (132)
                       ++++.|...+.........        ....|.++++.++    .|  ...+|..||..
T Consensus       539 i~~~~~C~~~~~~~~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~~~~~~lvGIvS~G~~  598 (625)
T 2f83_A          539 LVTNEECQKRYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEG  598 (625)
T ss_dssp             CCCHHHHHTTCTTSCCCTTBCCC----------CCCTTCEEEEEETTEEEEEEEEEECCC
T ss_pred             EcCHHHHHHHhccCCCCCCeEEeecCCCCCcCCCCCcccceEEEECCeEEEEEEEEeCCC
Confidence             6777776544321111111        2347888988877    12  36789999963

>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...

Probab=99.73  E-value=3.4e-18  Score=108.88  Aligned_cols=123  Identities=22%  Similarity=0.332  Sum_probs=86.3

Q ss_pred             eEEeeeEEEeCCCCCCCC--CCCceEEEEeCCC----eeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCccccc
Q psy15292          2 FKLNTRQSFVHPQYSPSD--FRNDVALIKIDKD----VVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAI   74 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~--~~~diall~l~~~----~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~   74 (132)
                      +.+.|.++++||+|+...  ..+|||||+|+++    +.+++.++|+|||...... .+..++++|||.+.......+..
T Consensus        74 ~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~~~~~~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~  153 (247)
T 3mhw_U           74 MKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQ  153 (247)
T ss_dssp             EEEEEEEEEECTTCEEC-CCEESCCEEEEEECTTSCCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSB
T ss_pred             EEEEEEEEEECCCCCCCcCCCCCcEEEEEeCCccccccccCCcccccccCCCcCCCCCCCEEEEEecCCcCCCCcccchh
Confidence            467899999999998766  6799999999999    7889999999999754332 68899999999876654434566


Q ss_pred             ceeee---ccCCeEEEEeccceee-ccC--------eeeeecCCCCCCC--C--C--ceEEEEeeccc
Q psy15292         75 PTYVS---ISNDVALIKIDKDVVF-KQH--------IIPVCLPDQTVKL--V--G--KSATVAGWGRT  124 (132)
Q Consensus        75 l~~~~---~~~d~c~~~~~~~~~~-~~~--------v~~icl~~~~~~~--~--g--~~~~v~gwg~~  124 (132)
                      ++...   ++++.|.......... ...        ....|.++++.++  .  |  ....|..||..
T Consensus       154 l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~~~~~l~Gi~S~g~~  221 (247)
T 3mhw_U          154 LKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRG  221 (247)
T ss_dssp             CEEEEEEEECHHHHTSTTTTGGGCCTTEEEEECTTSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSS
T ss_pred             heeeEEEEEChHHhcCccccCCcCCCCeEecCCCCCCCccCCCCCCCeEEEEECCCEEEEEEEEECCC
Confidence            66655   6666665421111111 111        2356888888777  2  2  36788889854

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1

Probab=99.72  E-value=3.6e-18  Score=115.63  Aligned_cols=119  Identities=21%  Similarity=0.424  Sum_probs=80.8

Q ss_pred             EEeeeEEEeCCCCCCC---CCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceee
Q psy15292          3 KLNTRQSFVHPQYSPS---DFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYV   78 (132)
Q Consensus         3 ~~~v~~~~~h~~y~~~---~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~   78 (132)
                      .+.|.++++||+|+..   .+.||||||+|++++.|+++++|||||...... .+..++++|||.+...   .+..|+++
T Consensus       228 ~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~---~~~~L~~~  304 (399)
T 1gpz_A          228 NHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEK---IAHDLRFV  304 (399)
T ss_dssp             CCCEEEEEECSSCCSSSSSCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECC--------CCSBCEEE
T ss_pred             ccceEEEEECCCCCcCCCCCCCCcEEEEEECCcCcCCCceeeeecCCCccccCCCCEEEEEccCCCCCc---cCccceEE
Confidence            4578999999999753   578999999999999999999999999765433 5788999999987643   34567766


Q ss_pred             e---ccCCeEEEEeccc----eeeccCe--------eeeecCCCCCCC--CC------ceEEEEeeccc
Q psy15292         79 S---ISNDVALIKIDKD----VVFKQHI--------IPVCLPDQTVKL--VG------KSATVAGWGRT  124 (132)
Q Consensus        79 ~---~~~d~c~~~~~~~----~~~~~~v--------~~icl~~~~~~~--~g------~~~~v~gwg~~  124 (132)
                      .   ++++.|...+...    ....+.+        ...|.++++.++  ..      ...+|..||..
T Consensus       305 ~~~i~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~d~C~GDSGGPl~~~~~~~~~~~l~GivS~g~~  373 (399)
T 1gpz_A          305 RLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIG  373 (399)
T ss_dssp             EEEEECHHHHHC-----------CCSEEEEECGGGGGGGGCSCSSCEEEEEETTTTEEEEEEEECCCTT
T ss_pred             EEEEcCHHHhhhhhhcccccCcCCCCeEecccCCCCCccCCCCCchHeEEEECCCCeEEEEEEEEeCCC
Confidence            5   6777886544221    0111222        246888888776  21      36788889863

>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}

Probab=99.71  E-value=1.7e-18  Score=117.96  Aligned_cols=121  Identities=23%  Similarity=0.453  Sum_probs=84.6

Q ss_pred             EEeeeEEEeCCCCC-CCCCCCceEEEEeCCCeeeCCCeeeeeecCCCC----cccCCcEEEeccCccccC-----CCccc
Q psy15292          3 KLNTRQSFVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTV----KLVGKSATVAGWGRTRHA-----SSLSS   72 (132)
Q Consensus         3 ~~~v~~~~~h~~y~-~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~----~~~g~~~~~~GwG~~~~~-----~~~~~   72 (132)
                      .+.|.++++||+|+ ...+.||||||+|.+++.|+++++|||||....    ...+..|+++|||.+...     ....+
T Consensus       243 ~~~V~~ii~Hp~y~~~~~~~nDIALLkL~~pv~~s~~v~PicLp~~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~~~~~~  322 (424)
T 3nxp_A          243 ISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQP  322 (424)
T ss_dssp             EECEEEEEECTTCBTTTTSBTCCEEEEESSCCCCCSSCCCCBCCCHHHHHHHHHHCSEEEEEESSHHHHHHHHC----CC
T ss_pred             EEEEEEEEeCCCCCCCCCCcCCeEEEEecCccccCCcccccCCCCcccccccccCCCeEEEEecCCCCccCccccCCCCC
Confidence            45689999999998 457889999999999999999999999987543    126889999999986432     11225


Q ss_pred             ccceeee---ccCCeEEEEeccceeeccCe-----------eeeecCCCCCCC--CC------ceEEEEeeccc
Q psy15292         73 AIPTYVS---ISNDVALIKIDKDVVFKQHI-----------IPVCLPDQTVKL--VG------KSATVAGWGRT  124 (132)
Q Consensus        73 ~~l~~~~---~~~d~c~~~~~~~~~~~~~v-----------~~icl~~~~~~~--~g------~~~~v~gwg~~  124 (132)
                      ..|+.+.   ++++.|...+...+ ..+.+           ...|.++++.++  .+      ...+|..||..
T Consensus       323 ~~L~~~~v~ii~~~~C~~~~~~~i-~~~~iCAg~~~~~~~~~d~C~GDSGGPLv~~~~~~~~~~l~GIvS~G~~  395 (424)
T 3nxp_A          323 SVLQVVNLPIVERPVCKDSTRIRI-TDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEG  395 (424)
T ss_dssp             SBCEEEEEEBCCHHHHHHTCSSCC-CTTEEEESCCCBTTBCCCTTCSCTTCEEEEECTTTCCEEEEEEECCSSC
T ss_pred             ccceEEEeeEEcHHHhhhhccCcC-CCCeEecccCCCCCCCCccCCCcCCCceEEEECCCCcEEEEEEEEeCCC
Confidence            5677665   66777764432111 11112           246778888776  22      35789999953

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=99.70  E-value=8.1e-18  Score=110.82  Aligned_cols=118  Identities=15%  Similarity=0.224  Sum_probs=82.5

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCC----CcccCCcEEEeccCccccCCCccccccee
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQT----VKLVGKSATVAGWGRTRHASSLSSAIPTY   77 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~----~~~~g~~~~~~GwG~~~~~~~~~~~~l~~   77 (132)
                      +.+.|.++++||+|+...+.||||||+|++++.|+++++|+|||...    ....+..++++|||...   ...+..|++
T Consensus       157 ~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~---~~~~~~L~~  233 (317)
T 3h5c_B          157 LMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNG---TDLGNSLTT  233 (317)
T ss_dssp             EEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCTTTSCCCCBCCCHHHHHHTTTTTSCEEEEBCCTTC---CSSSCCCBC
T ss_pred             EEEEeeEEEECCCCCCCCCCCCeEEEEeCCcccCCCCccceeCCCcccccccccCCCeEEEEecCCCC---CCCCccceE
Confidence            56889999999999998999999999999999999999999999764    22368899999999822   223455665


Q ss_pred             ee---ccCCeEEEEeccceeeccCeee-----eecCCCCCCC--C--Cc--eEEEEeecc
Q psy15292         78 VS---ISNDVALIKIDKDVVFKQHIIP-----VCLPDQTVKL--V--GK--SATVAGWGR  123 (132)
Q Consensus        78 ~~---~~~d~c~~~~~~~~~~~~~v~~-----icl~~~~~~~--~--g~--~~~v~gwg~  123 (132)
                      +.   ++++.|...+...+ ....++.     .|.++++.++  .  |.  ...|.+||.
T Consensus       234 ~~v~~~~~~~C~~~~~~~~-~~~~~Ca~~~~~~~~gDsGgPl~~~~~~~~~l~Gi~S~g~  292 (317)
T 3h5c_B          234 RPVTLVEGEECGQVLNVTV-TTRTYCERSSVAAMHWMDGSVVTREHRGSWFLTGVLGSQP  292 (317)
T ss_dssp             CEEEEECHHHHHHHHTCCC-CTTEEEEECSCCCCCCCTTCEEEEEETTEEEEEEEECCCC
T ss_pred             EEEEEECHHHHhhhhcCcC-CCceeECCCCCCCcCCCCCCCEEEecCCEEEEEEEEEECC
Confidence            44   66677765443211 1122221     3445666665  2  22  577888875

>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A

Probab=99.68  E-value=2.5e-16  Score=100.00  Aligned_cols=114  Identities=21%  Similarity=0.248  Sum_probs=81.6

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.+++.||+      .+|||||+|++++.|+++++|+|||...... .+..++++|||.+....  ....|+.+. 
T Consensus        69 ~~~~v~~~~~~p~------~~DiALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~--~~~~L~~~~~  140 (240)
T 1si5_H           69 QVLNVSQLVYGPE------GSDLVLMKLARPAVLDDFVSTIDLPNYGSTIPEKTSCSVYGWGYTGLIN--YDGLLRVAHL  140 (240)
T ss_dssp             EEEEEEEEEECSS------TTCEEEEEESSCCCCSSSCCCCBCCCTTCCCCTTCEEEEEESSCCCCSS--CCCBCEEEEE
T ss_pred             eEEEEEEEEcCCC------CCcEEEEEECCccccCCceeccCcCCcCCCCCCCCEEEEEEeCCCCCCC--CCCeeEEEEE
Confidence            4578889999986      6999999999999999999999999764332 68899999999876543  345677655 


Q ss_pred             --ccCCeEEEEeccceeec-cC--------eeeeecCCCCCCC--CC----ceEEEEeecc
Q psy15292         80 --ISNDVALIKIDKDVVFK-QH--------IIPVCLPDQTVKL--VG----KSATVAGWGR  123 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~~~-~~--------v~~icl~~~~~~~--~g----~~~~v~gwg~  123 (132)
                        ++++.|...+.....+. ..        ....|.++++.++  .+    ....|..||.
T Consensus       141 ~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~  201 (240)
T 1si5_H          141 YIMGNEKCSQHHRGKVTLNESEICAGAEKIGSGPCEGDYGGPLVCEQHKMRMVLGVIVPGR  201 (240)
T ss_dssp             EEECGGGTCC-------CCTTEEEEECSSSCCBCCTTCTTCEEEEECSSSEEEEEEECSCS
T ss_pred             eecCHHHhhhhhcCCccCCCCEEeecCCCCCCEeccCCCCCcEEEEECCcEEEEEEEEECC
Confidence              78888876553321111 11        2347888888777  33    5788888986

>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}

Probab=99.67  E-value=1.1e-16  Score=101.41  Aligned_cols=114  Identities=21%  Similarity=0.341  Sum_probs=82.7

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.+++.||+      .+|||||+|++++.++++++|+|||...... .+..++++|||.+....  ....|+.+. 
T Consensus        70 ~~~~v~~i~~hp~------~~DiALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~--~~~~L~~~~~  141 (234)
T 2asu_B           70 QRVPVAKMVCGPS------GSQLVLLKLERSVTLNQRVALICLPPEWYVVPPGTKCEIAGWGETKGTG--NDTVLNVALL  141 (234)
T ss_dssp             EEEEEEEEEECST------TCCEEEEEESSCCCCSSSSCCCBCCCTTCCCCTTCEEEEEESSCCTTSS--CTTBCEEEEE
T ss_pred             EEEEEEEEecCCC------CCCeEEEEeCCcCcCCCcEeccCCCCccccCCCCCEEEEEeCCccCCCC--CCccceEEEe
Confidence            5678999999996      5899999999999999999999999765433 68899999999876543  245666654 


Q ss_pred             --ccCCeEEEEeccceeeccC--------eeeeecCCCCCCC--CC----ceEEEEeeccc
Q psy15292         80 --ISNDVALIKIDKDVVFKQH--------IIPVCLPDQTVKL--VG----KSATVAGWGRT  124 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~~~~~--------v~~icl~~~~~~~--~g----~~~~v~gwg~~  124 (132)
                        ++++.|...+...+ ....        ....|.++++.++  .+    ....|..||..
T Consensus       142 ~~~~~~~C~~~~~~~~-~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~  201 (234)
T 2asu_B          142 NVISNQECNIKHRGRV-RESEMCTEGLLAPVGACEGDYGGPLACFTHNSWVLEGIIIPNRV  201 (234)
T ss_dssp             EEECHHHHHHHTTTCC-CTTEEEECCCSSCCBCCTTCTTCEEEEEETTEEEEEEEECCCSS
T ss_pred             eEEcHHHcccccCCcc-CcceEeecCCCCCCeeccCCCCCceEEEECCeEEEEEEEEcCCC
Confidence              67777764432111 1111        2347888888777  33    57788889863

>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}

Probab=99.65  E-value=1.3e-16  Score=112.08  Aligned_cols=119  Identities=23%  Similarity=0.359  Sum_probs=68.4

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCC----CeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccce
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQ----HIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPT   76 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~----~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~   76 (132)
                      +.+.|.++++||+|+...+.||||||+|++++.+++    .++|||||...... .+..++++|||.+....  .+..|+
T Consensus       390 ~~~~V~~ii~Hp~Y~~~~~~nDIALlkL~~~v~~~~~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~--~~~~L~  467 (565)
T 2xrc_A          390 VIEYVDRIIFHENYNAGTYQNDIALIEMKKDGNKKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDNE--RVFSLQ  467 (565)
T ss_dssp             CEEEEEEEEECTTCCTTTCTTCCEEEEECCCSSSSCSCCTTCCCCBCCSCTTSSCTTCEEEEEC---------------C
T ss_pred             EEEEEEEEEeCCCCCCCcccccceeeeeccccccccccccceeeeecCCcccccCCCCEEEEEeCccCCCCC--ccceee
Confidence            457899999999999999999999999999998764    68999999765433 68899999999876542  345566


Q ss_pred             eee--ccCCeEEEEeccceeeccCe--------eeeecCCCCCCC--C---C--ceEEEEeecc
Q psy15292         77 YVS--ISNDVALIKIDKDVVFKQHI--------IPVCLPDQTVKL--V---G--KSATVAGWGR  123 (132)
Q Consensus        77 ~~~--~~~d~c~~~~~~~~~~~~~v--------~~icl~~~~~~~--~---g--~~~~v~gwg~  123 (132)
                      ++.  +.. .|...+...+.-...+        ...|.++++.++  .   |  ...+|..||.
T Consensus       468 ~~~v~i~~-~C~~~~~~~~~~~~~iCAg~~~g~~d~C~GDSGGPLv~~~~~~~~~lvGIvS~G~  530 (565)
T 2xrc_A          468 WGEVKLIS-NCSKFYGNRFYEKEMECAGTYDGSIDACKGDSGGPLVCMDANNVTYVWGVVSWGE  530 (565)
T ss_dssp             EEEEEECS-CTHHHHTTSCCTTTEEEEEEC----------CCCEEEEECTTCCEEEEEEECC--
T ss_pred             EEeeeehH-HhHHhhccCcCCCceEEeCCCCCCCccCCCccccceEEEeCCCcEEEEEEEeeCC
Confidence            655  222 2544332221111111        247888888777  2   2  2678888985

>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A

Probab=99.65  E-value=3.1e-16  Score=98.59  Aligned_cols=117  Identities=19%  Similarity=0.286  Sum_probs=81.9

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      +.+.+.++++||+|+...+.+|||||+|++|+.+    .++||+..... .+..++++|||.+..... .+..|+.+.  
T Consensus        63 ~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~----~~i~l~~~~~~-~~~~~~v~GwG~~~~~~~-~~~~l~~~~~~  136 (224)
T 3beu_A           63 VKVRSTKVLQAPGFTKETYGKDWALIKLAQPINQ----PTLKIATTTAY-NQGTFTVAGWGANREGGS-QQRYLLKANVP  136 (224)
T ss_dssp             EEEEEEEEEECTTCCCGGGSCCCEEEEESSCCCS----CCCEECCSSTT-SSSEEEEEESSCSSTTCC-CCSBCEEEEEE
T ss_pred             eEEEEEEEEeCCCcCCCcCCCCEEEEEeCCCCCC----Ccccccccccc-CCCEEEEEecCccCCCCc-ccceeeEeeCc
Confidence            4578899999999998888999999999999864    57788765443 455899999998765532 355666655  


Q ss_pred             -ccCCeEEEEeccceeeccC--------eeeeecCCCCCCC--CC-----ceEEEEeeccc
Q psy15292         80 -ISNDVALIKIDKDVVFKQH--------IIPVCLPDQTVKL--VG-----KSATVAGWGRT  124 (132)
Q Consensus        80 -~~~d~c~~~~~~~~~~~~~--------v~~icl~~~~~~~--~g-----~~~~v~gwg~~  124 (132)
                       ++++.|...+.........        ....|.++++.++  .+     ....|..||..
T Consensus       137 ~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~l~Gi~S~g~~  197 (224)
T 3beu_A          137 FVSDAACRSSSSFILVANEMICAGYDTKQEDTCQGDSGGPMFRKDNADEWVQVGIVSWGEG  197 (224)
T ss_dssp             EECHHHHHHHCSSCCCGGGEEEECCSSSSCBCCTTCTTCEEEEECTTSCEEEEEEEEEESS
T ss_pred             ccCHHHhhhhcCCccCCCCeEEeccCCCCCcCCCCcCCCeeEEecCCCCEEEEEEeccCCC
Confidence             6777776543211111122        2346888888776  22     46788999963

>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}

Probab=99.61  E-value=9.5e-16  Score=99.08  Aligned_cols=123  Identities=23%  Similarity=0.333  Sum_probs=86.7

Q ss_pred             eEEeeeEEEeCCCCCCCC--CCCceEEEEeCCCe----eeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCccccc
Q psy15292          2 FKLNTRQSFVHPQYSPSD--FRNDVALIKIDKDV----VFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAI   74 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~--~~~diall~l~~~~----~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~   74 (132)
                      +.+.|.++++||+|+...  +.+|||||+|..++    .++.+++|+|||...... .+..+.+.|||.+..........
T Consensus        97 ~~~~v~~i~~Hp~y~~~~~~~~~Diall~L~~~~~~~~~~~~~v~picL~~~~~~~~~~~~~~~~g~G~~~~~~~~~~~~  176 (276)
T 2vnt_A           97 MKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQ  176 (276)
T ss_dssp             EEEEEEEEEECTTCEECSSCEESCCEEEEEECTTSCCCCCCSSCCCCBCCCSSCCCCTTCEEEEEESCCSSTTCSCCCSB
T ss_pred             EEEEEEEEEEccccccccccccchhhhhhhhccccccccCcccccccccccccccccccceEEEEEeeccccCCCCcchh
Confidence            467899999999997654  46899999998665    578999999998765443 68889999999876665555556


Q ss_pred             ceeee---ccCCeEEEEeccceeec---------cCeeeeecCCCCCCC--CC----ceEEEEeeccc
Q psy15292         75 PTYVS---ISNDVALIKIDKDVVFK---------QHIIPVCLPDQTVKL--VG----KSATVAGWGRT  124 (132)
Q Consensus        75 l~~~~---~~~d~c~~~~~~~~~~~---------~~v~~icl~~~~~~~--~g----~~~~v~gwg~~  124 (132)
                      ++.+.   ++++.|...+.......         ......|.++++.++  ..    ...+|..||..
T Consensus       177 l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~C~GDSGGPLv~~~~~~~~lvGIvS~G~~  244 (276)
T 2vnt_A          177 LKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRG  244 (276)
T ss_dssp             CEEEEEEEECHHHHTSTTTTGGGSCTTEEEEECTTSCCCCCTTCTTCEEEEEETTEEEEEEEEEECSS
T ss_pred             heeeeeeEecHHHhhhhhccCcccCccceeeccCCCCCCCCCCCCCCeEEEeeCCeEEEEEEEEECCC
Confidence            66544   66777755432221111         112347888888777  22    27788899964

>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A

Probab=99.60  E-value=1.5e-15  Score=96.87  Aligned_cols=115  Identities=23%  Similarity=0.395  Sum_probs=79.7

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.+++.||.      .+|||||+|++++.++++++|+|||...... .+..++++|||.+....  ....|+.+. 
T Consensus        87 ~~~~v~~~~~hp~------~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~--~~~~L~~~~~  158 (247)
T 1ddj_A           87 QEIEVSRLFLEPT------RKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTF--GAGLLKEAQL  158 (247)
T ss_dssp             EEEEEEEEEECTT------SCSCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCCCSSST--TTTBCEEEEE
T ss_pred             EEEEeeeEEcCCC------CCcEEEEEeCCceeeCCCEEeeecCCcccCCCCCCEEEEEEcccCCCCC--CCccceEEee
Confidence            4577889999985      5899999999999999999999999765432 67889999999875432  245566655 


Q ss_pred             --ccCCeEEEEec-cceeeccC--------eeeeecCCCCCCC--CC----ceEEEEeeccc
Q psy15292         80 --ISNDVALIKID-KDVVFKQH--------IIPVCLPDQTVKL--VG----KSATVAGWGRT  124 (132)
Q Consensus        80 --~~~d~c~~~~~-~~~~~~~~--------v~~icl~~~~~~~--~g----~~~~v~gwg~~  124 (132)
                        ++++.|..... ........        ....|.++++.++  ..    ....|..||..
T Consensus       159 ~i~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~  220 (247)
T 1ddj_A          159 PVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGGPLVCFEKDKYILQGVTSWGLG  220 (247)
T ss_dssp             EEECHHHHTSTTTTTTCCCTTEEEESCSSSCCCBCCSCTTCEEEEECSSSEEEEEEECGGGC
T ss_pred             eecCHHHhcchhccCCCCcCCeEeecCCCCCCccccCcCcCcEEEEECCcEEEEEEEEECCC
Confidence              66777753210 00001111        2346888888776  22    36788889863

>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A

Probab=99.55  E-value=2.4e-16  Score=98.54  Aligned_cols=109  Identities=14%  Similarity=0.188  Sum_probs=81.1

Q ss_pred             EEeeeEEEeCCCCC-CCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          3 KLNTRQSFVHPQYS-PSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         3 ~~~v~~~~~h~~y~-~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      .+.|.++++||+|+ .....+|||||+|+++  +++.++|+|||.... ..+..++++|||.+...  .....+++..  
T Consensus        76 ~~~v~~i~~hp~y~~~~~~~~DiAll~L~~~--~~~~v~pi~l~~~~~-~~g~~~~~~Gwg~~~~~--~~~~~l~~~~~~  150 (215)
T 1p3c_A           76 SANMTEFYVPSGYINTGASQYDFAVIKTDTN--IGNTVGYRSIRQVTN-LTGTTIKISGYPGDKMR--STGKVSQWEMSG  150 (215)
T ss_dssp             CEEEEEEECCHHHHHHCCGGGCCEEEEESSC--HHHHHCCCCBCCCSC-CTTCEEEEEECCHHHHH--HHSSCCCEEEEE
T ss_pred             eEEEEEEEeCCccccCCCcccCEEEEEECCC--CcccceeeecCCCcc-cCCCeEEEecCCCCCcc--cccceechhccC
Confidence            46789999999994 5677899999999996  678899999997654 37889999999975432  1233455544  


Q ss_pred             -ccCCeEEEEeccceeeccCeeeeecCCCCCCC---CCceEEEEeeccc
Q psy15292         80 -ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL---VGKSATVAGWGRT  124 (132)
Q Consensus        80 -~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~---~g~~~~v~gwg~~  124 (132)
                       ++++.|...+.        -...|.++++.++   .|....|..||..
T Consensus       151 ~~~~~~c~~~~~--------~~~~C~GDSGgPl~~~~g~lvGi~S~g~~  191 (215)
T 1p3c_A          151 SVTREDTNLAYY--------TIDTFSGNSGSAMLDQNQQIVGVHNAGYS  191 (215)
T ss_dssp             ECCEECSSEEEE--------CCCCCTTCTTCEEECTTSCEEEECCEEEG
T ss_pred             ccCcccchheee--------ccccCCCCCCCeeEccCCeEEEEEecccC
Confidence             66677765442        2457889998776   4678888888853

>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A

Probab=99.48  E-value=2.5e-15  Score=104.19  Aligned_cols=122  Identities=21%  Similarity=0.239  Sum_probs=80.9

Q ss_pred             eEEeeeEEEeCCCCCCC---------CCCCceEEEEeCCCeeeCCCeeeeeecCCCC------cccCCcEEEeccCcccc
Q psy15292          2 FKLNTRQSFVHPQYSPS---------DFRNDVALIKIDKDVVFKQHIIPVCLPDQTV------KLVGKSATVAGWGRTRH   66 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~---------~~~~diall~l~~~~~~~~~~~~~cl~~~~~------~~~g~~~~~~GwG~~~~   66 (132)
                      +.+.|.++++||+|+..         .+.||||||+|.+|+.|+++++|||||....      ...+..|++.|||....
T Consensus       279 ~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~~~~~g~g~~~~  358 (497)
T 1rrk_A          279 RDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPA  358 (497)
T ss_dssp             SCEEEEEEEECTTCCTTTTGGGTCSSCCTTCCEEEEESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCS
T ss_pred             ceeeeEEEEeCCCccccccccccccccCCCcEEEEEECCCCcCCCCeeeeeCCCCCccccccccCCCCchhcccccccCC
Confidence            45789999999999864         5789999999999999999999999996531      12577888889986532


Q ss_pred             CC------Ccccccceeee---cc---CCeEEEEecc-----------ceeeccCe----------eeeecCCCCCCC--
Q psy15292         67 AS------SLSSAIPTYVS---IS---NDVALIKIDK-----------DVVFKQHI----------IPVCLPDQTVKL--  111 (132)
Q Consensus        67 ~~------~~~~~~l~~~~---~~---~d~c~~~~~~-----------~~~~~~~v----------~~icl~~~~~~~--  111 (132)
                      ..      ......|+.+.   ++   ++.|...+..           .......+          ...|.++++.++  
T Consensus       359 ~~~~~~~~~~~~~~L~~~~v~i~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~iCag~~~~~~~~~~C~GDSGGPL~~  438 (497)
T 1rrk_A          359 QDIKALFVSEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIV  438 (497)
T ss_dssp             SEEEEEEEEESSSCEEEEEEEEECSTTHHHHHHGGGGSTTCTTCSCGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEE
T ss_pred             ccccceeeccCCCcceeeeEEEecCcccchhhhhhhhcccccccccccccCCCCeEEeCCCCCCCCCcCCCCCCCCeeEE
Confidence            21      01234455544   33   3567532100           00011222          236888888777  


Q ss_pred             CC----ceEEEEeecc
Q psy15292        112 VG----KSATVAGWGR  123 (132)
Q Consensus       112 ~g----~~~~v~gwg~  123 (132)
                      .+    ...+|..||.
T Consensus       439 ~~~~~~~l~GIvS~g~  454 (497)
T 1rrk_A          439 HKRSRFIQVGVISWGV  454 (497)
T ss_dssp             EETTEEEEEEEEEEES
T ss_pred             EeCCEEEEEEEEEecC
Confidence            22    2689999997

>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A

Probab=99.47  E-value=3e-14  Score=103.14  Aligned_cols=115  Identities=23%  Similarity=0.397  Sum_probs=78.7

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.++++||.      .+|||||+|.+++.|+++++|||||...... .+..++++|||.+....  ....|+.+. 
T Consensus       631 q~~~V~~i~~hp~------~nDIALLkL~~pv~~s~~V~PIcLP~~~~~~~~g~~~~vsGWG~t~~~~--~s~~L~~~~v  702 (791)
T 4dur_A          631 QEIEVSRLFLEPT------RKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTF--GAGLLKEAQL  702 (791)
T ss_dssp             EEEEEEEEEECTT------CCSCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCCC---C--CTTBCEEEEE
T ss_pred             EEEEEEEEECCCC------CCceEEEEecCccccCCceeeeeccCcccccCCCCEEEEEEeCCCCCCC--CCCeeEEEEE
Confidence            5678999999996      4799999999999999999999999765433 68889999999876432  355666655 


Q ss_pred             --ccCCeEEEEe-ccceeeccC--------eeeeecCCCCCCC--C-C---ceEEEEeeccc
Q psy15292         80 --ISNDVALIKI-DKDVVFKQH--------IIPVCLPDQTVKL--V-G---KSATVAGWGRT  124 (132)
Q Consensus        80 --~~~d~c~~~~-~~~~~~~~~--------v~~icl~~~~~~~--~-g---~~~~v~gwg~~  124 (132)
                        ++++.|.... .........        ....|.++++.++  . +   ...+|..||..
T Consensus       703 ~ii~~~~C~~~~~~~~~i~~~~iCAg~~~gg~daC~GDSGGPLv~~~~~~~~LvGIvS~G~g  764 (791)
T 4dur_A          703 PVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLG  764 (791)
T ss_dssp             EEECHHHHTSTTTTTTCCCTTEEEESCSSSCCCBCCSCTTCEEEEEETTEEEEEEECCTTTC
T ss_pred             EEeCHHHhhcccccCCCCCCCeEEeccCCCCCCCCCCCcccceEEEeCCeEEEEEEEEeCCC
Confidence              6666774321 111111111        2346788888777  2 2   26778888853

>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*

Probab=99.43  E-value=4.7e-15  Score=103.10  Aligned_cols=65  Identities=18%  Similarity=0.343  Sum_probs=53.7

Q ss_pred             eEEeeeEEEeCCCCCCC---------CCCCceEEEEeCCCeeeCCCeeeeeecCCCC------cccCCcEEEeccCcccc
Q psy15292          2 FKLNTRQSFVHPQYSPS---------DFRNDVALIKIDKDVVFKQHIIPVCLPDQTV------KLVGKSATVAGWGRTRH   66 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~---------~~~~diall~l~~~~~~~~~~~~~cl~~~~~------~~~g~~~~~~GwG~~~~   66 (132)
                      +.+.|.++++||+|+..         .+.||||||+|++|+.|+++++|+|||....      ...|..|++.|||....
T Consensus       288 ~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~g~~~~~~g~g~~~~  367 (509)
T 2odp_A          288 KEFLIEKAVISPGFDVFAKKNQGILEFYGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNK  367 (509)
T ss_dssp             EEECEEEEEECTTCCTTTTGGGTCCCCCTTCCEEEEESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCS
T ss_pred             ceeeeEEEEECCCCccccccccccccccCCCeEEEEECCcccCCCCcccccCCCCcccchhhccCCCCcccccccccccc
Confidence            46789999999999874         5789999999999999999999999996431      12577788889987543

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*

Probab=99.40  E-value=1.3e-14  Score=104.75  Aligned_cols=66  Identities=24%  Similarity=0.352  Sum_probs=53.9

Q ss_pred             eEEeeeEEEeCCCCCCCC---------CCCceEEEEeCCCeeeCCCeeeeeecCCCC------cccCCcEEEeccCcccc
Q psy15292          2 FKLNTRQSFVHPQYSPSD---------FRNDVALIKIDKDVVFKQHIIPVCLPDQTV------KLVGKSATVAGWGRTRH   66 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~---------~~~diall~l~~~~~~~~~~~~~cl~~~~~------~~~g~~~~~~GwG~~~~   66 (132)
                      +.+.|.++++||+|+...         +.||||||+|++++.++++++|||||....      ...+..|++.|||.+..
T Consensus       521 ~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~~~~~~~~gwg~~~~  600 (741)
T 3hrz_D          521 RDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPA  600 (741)
T ss_dssp             CCEEEEEEEECTTCCTTTTGGGTCSCCCTTCCEEEEESSCCCCCSSCCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCS
T ss_pred             eEEEEEEEEECCCCCcccccccccCCccCCcEEEEEECCcCcCCCCccccccCCcccccchhccCCCCcccccccccccc
Confidence            357899999999998643         789999999999999999999999985431      12577888999997654


Q ss_pred             C
Q psy15292         67 A   67 (132)
Q Consensus        67 ~   67 (132)
                      .
T Consensus       601 ~  601 (741)
T 3hrz_D          601 Q  601 (741)
T ss_dssp             S
T ss_pred             c
Confidence            3

>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}

Probab=99.39  E-value=1.1e-13  Score=86.70  Aligned_cols=110  Identities=9%  Similarity=0.069  Sum_probs=74.9

Q ss_pred             EEeeeEEEeCCCCCC-CCCCCceEEEEeCCC--eeeCCCee-eeeecCCCCcccCCcEEEeccCccccCCCcccccceee
Q psy15292          3 KLNTRQSFVHPQYSP-SDFRNDVALIKIDKD--VVFKQHII-PVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYV   78 (132)
Q Consensus         3 ~~~v~~~~~h~~y~~-~~~~~diall~l~~~--~~~~~~~~-~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~   78 (132)
                      .+.|.++++||+|+. ....||||||+|.++  +.+++.++ +++|+...  ..+..++++|||.+.....   ..+   
T Consensus        70 ~~~v~~~~~hp~y~~~~~~~~DiAll~L~~~~~~~~~~~v~~~~~l~~~~--~~g~~~~v~GwG~~~~~~~---~~l---  141 (218)
T 3cp7_A           70 VWAAEELVTSAEWANRGDFEHDYAFAVLETKGGTTVQQQVGTASPIAFNQ--PRGQYYSAYGYPAAAPFNG---QEL---  141 (218)
T ss_dssp             CEEEEEEEECHHHHHHCCGGGCCEEEEECCBTTBCHHHHHSCCBCBCCSC--CSSCEEEEEECCCSTTCCS---SSC---
T ss_pred             EEEEEEEEECcccccCCCCcCCEEEEEEeCCCCcChhHhcCcccceeecC--CCCCEEEEEeCCCCCCCCC---cee---
Confidence            467899999999974 467899999999999  78888898 88987543  2678899999998642111   111   


Q ss_pred             eccCCeEEEEe-ccce--eeccCeeeeecCCCCCCC--C----CceEEEEeeccc
Q psy15292         79 SISNDVALIKI-DKDV--VFKQHIIPVCLPDQTVKL--V----GKSATVAGWGRT  124 (132)
Q Consensus        79 ~~~~d~c~~~~-~~~~--~~~~~v~~icl~~~~~~~--~----g~~~~v~gwg~~  124 (132)
                          ..|.... ...+  .....+|..|-++++.++  .    +....|..||..
T Consensus       142 ----~~C~~~~~~~~~~~~~~~~~Ca~~~GDSGGPlv~~~~g~~~lvGIvS~G~g  192 (218)
T 3cp7_A          142 ----HSCHGTATNDPMGSSTQGIPCNMTGGSSGGPWFLGNGTGGAQNSTNSYGYT  192 (218)
T ss_dssp             ----EEEEEECEECTTSSSCEEEECCCCTTCTTCEEEESSSSSSCEEEECCEEET
T ss_pred             ----eEeeeeEEcCCCCCceEEecCCCCCCCcCCeeEEccCCCeEEEEEEccccC
Confidence                3554432 1110  011234444557888777  3    678899999854

>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A

Probab=99.17  E-value=8.3e-11  Score=74.68  Aligned_cols=103  Identities=11%  Similarity=0.098  Sum_probs=70.5

Q ss_pred             EEeeeEEEeCCCCCCCCCCCceEEEEeCCCee---eCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee
Q psy15292          3 KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVV---FKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS   79 (132)
Q Consensus         3 ~~~v~~~~~h~~y~~~~~~~diall~l~~~~~---~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~   79 (132)
                      .+.+..++.|| |+   ..+|||||+|..++.   +++.+.++||+.......|+.+++.|||......     .++...
T Consensus       104 ~~~~~~i~~~~-~~---~~~DiAll~l~~~~~~~~~~~~v~~i~L~~~~~~~~g~~~~v~Gwg~~~~~~-----~l~~~~  174 (242)
T 1agj_A          104 EYEVKEILQEP-FG---AGVDLALIRLKPDQNGVSLGDKISPAKIGTSNDLKDGDKLELIGYPFDHKVN-----QMHRSE  174 (242)
T ss_dssp             CEEEEEEESCT-TC---TTSCCEEEEECCCTTSCCHHHHSCCCEECCSTTCCTTCEEEEEECCTTTSTT-----CCEEEE
T ss_pred             ceeEEEEEeCC-CC---CCCcEEEEEEcCCCccccccccccceecCccccCCCCCEEEEEeCCCCCCCc-----cceeee
Confidence            35677788888 74   579999999999853   6678999999864333378899999999754321     122221


Q ss_pred             ---ccCCeEEEEeccceeeccCeeeeecCCCCCCC---CCceEEEEeeccc
Q psy15292         80 ---ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL---VGKSATVAGWGRT  124 (132)
Q Consensus        80 ---~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~---~g~~~~v~gwg~~  124 (132)
                         ...+.+       +.   ..+.+|-++++.++   .|....|..||..
T Consensus       175 ~~~~~~~~~-------~~---~~~~~c~GdSGGPl~~~~g~lvGI~s~g~~  215 (242)
T 1agj_A          175 IELTTLSRG-------LR---YYGFTVPGNSGSGIFNSNGELVGIHSSKVS  215 (242)
T ss_dssp             EEECCGGGS-------EE---EECCCCGGGTTCEEECTTSEEEEEEEEEEE
T ss_pred             eeEecCCce-------EE---EeCCcCCCCCchHhcccCCEEEEEEecccc
Confidence               211111       11   12457899998877   4788999999864

>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...

Probab=99.05  E-value=2.1e-10  Score=66.29  Aligned_cols=52  Identities=37%  Similarity=0.741  Sum_probs=43.7

Q ss_pred             cceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccC
Q psy15292         74 IPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTR  125 (132)
Q Consensus        74 ~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~  125 (132)
                      |+.|..  ..+|++++++..++.+++.+.++|||.....+ .|..|.++|||.+.
T Consensus        76 hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~g~~~~v~GWG~t~  130 (131)
T 1yph_C           76 NSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTR  130 (131)
T ss_dssp             CTTCCTTTCCSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSC
T ss_pred             CCCCCCCCCCCCEEEEEECCcccCCCcCcceECCCcccCCCCCCEEEEEcCCccC
Confidence            444443  67999999999999999999999999875444 79999999999875

>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A

Probab=98.93  E-value=1.3e-09  Score=69.32  Aligned_cols=103  Identities=17%  Similarity=0.200  Sum_probs=69.0

Q ss_pred             EEeeeEEEeCCCCCCCCCCCceEEEEeCCCe---eeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCccccccee-e
Q psy15292          3 KLNTRQSFVHPQYSPSDFRNDVALIKIDKDV---VFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTY-V   78 (132)
Q Consensus         3 ~~~v~~~~~h~~y~~~~~~~diall~l~~~~---~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~-~   78 (132)
                      .+.+..++.|| |+   ..+|||||+|..++   .+++.+.++||+.......|+.+++.||+......    ..++. .
T Consensus        98 ~~~~~~i~~hp-~~---~~~DiALLkl~~~~~~~~~~~~v~~i~L~~~~~~~~g~~v~v~G~p~g~~~~----~~~~~~~  169 (246)
T 1qtf_A           98 KFEAEEIKESP-YG---QGLDLAIIKLKPNEKGESAGDLIQPANIPDHIDIAKGDKYSLLGYPYNYSAY----SLYQSQI  169 (246)
T ss_dssp             CEEEEEEESCT-TC---TTSCCEEEEECCCTTSCCHHHHSCCCCCCSSCCCCTTCEEEEEECCTTTSTT----CCEEEEE
T ss_pred             eEEEEEEEeCC-CC---CCCCEEEEEEeCCccccccccceeeeecCCccccCCCCEEEEEECCCCCCCc----eeEeeee
Confidence            45677888898 64   57899999999987   56678899999865433478999999996532211    11111 1


Q ss_pred             eccCCeEEEEeccceeeccCeeeeecCCCCCCC---CCceEEEEeecccC
Q psy15292         79 SISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL---VGKSATVAGWGRTR  125 (132)
Q Consensus        79 ~~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~---~g~~~~v~gwg~~~  125 (132)
                      .+..         ...+   -..+|-++++.++   .|....|..||...
T Consensus       170 ~~~~---------~~~~---~~~~~~GdSGGPlv~~~g~lvGI~s~g~~~  207 (246)
T 1qtf_A          170 EMFN---------DSQY---FGYTEVGNSGSGIFNLKGELIGIHSGKGGQ  207 (246)
T ss_dssp             EESS---------SSBE---ESCCCGGGTTCEEECTTCCEEEEEEEEETT
T ss_pred             eecC---------cEEE---eCCCCCCCchhheECCCCEEEEEEeccccC
Confidence            1111         1111   1357889998777   58899999998643

>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A

Probab=98.86  E-value=2.4e-08  Score=64.56  Aligned_cols=101  Identities=11%  Similarity=0.142  Sum_probs=66.1

Q ss_pred             EeeeEEEeCCCCCCCCCCCceEEEEeCCCe---eeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee-
Q psy15292          4 LNTRQSFVHPQYSPSDFRNDVALIKIDKDV---VFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         4 ~~v~~~~~h~~y~~~~~~~diall~l~~~~---~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.+++.|+      ..+|||||+|..++   .|+..+.++||+.......|+.+++.|||......      +++.. 
T Consensus        80 ~~~~~i~~~~------~~~DIALLkL~~~~~~~~~~~~v~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~------~~~~~~  147 (274)
T 2o8l_A           80 FTAEQITKYS------GEGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQTNQNITVTGYPGDKPVA------TMWESK  147 (274)
T ss_dssp             EEEEEEEECS------SSSCCEEEEECCCTTSCCTTTSSCCCEECCCTTCCTTCEEEEEECCTTSSTT------CEEEEE
T ss_pred             EEEEEEEeCC------CCCcEEEEEecCcccccccccccccccccccccccCCCEEEEEECCCCCCCc------eEEecC
Confidence            3566777775      36899999999986   47888999999865433478999999999753211      11111 


Q ss_pred             --ccCCeEEEEeccceeeccCeeeeecCCCCCCC---CCceEEEEeeccc
Q psy15292         80 --ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL---VGKSATVAGWGRT  124 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~---~g~~~~v~gwg~~  124 (132)
                        +..      +.......  -+.+|-++++.++   .|...+|..||..
T Consensus       148 g~i~~------~~~~~i~~--~~~~c~GdSGGPLv~~~g~lvGIvS~G~~  189 (274)
T 2o8l_A          148 GKITY------LKGEAMQY--DLSTTGGNSGSPVFNEKNEVIGIHWGGVP  189 (274)
T ss_dssp             EEEEE------EETTEEEE--SCCCCTTCTTCEEECTTSCEEEEEEEEET
T ss_pred             ceEEe------cCCCeEEe--CcccCCCCchhheeccCCeEEEEEeCccc
Confidence              110      00111111  1357889998777   4788999999864

>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B

Probab=98.80  E-value=9.8e-09  Score=60.73  Aligned_cols=48  Identities=21%  Similarity=0.478  Sum_probs=42.7

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++.+++.+.++|||..... .|..|.++|||.+..++
T Consensus         6 ~~nDIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~v~GWG~~~~~~   53 (152)
T 2pka_B            6 YSHDLMLLRLQSPAKITDAVKVLELPTQEPE-LGSTCEASGWGSIEPGP   53 (152)
T ss_dssp             CTTCCEEEEESSCCCCCSSCCCCCCCSSCCC-TTCEEEEEESSCSSCCS
T ss_pred             CCCCEEEEEECCCCcCCCCEEeEECCCCCCC-CCCEEEEEecccccCCC
Confidence            5789999999999999999999999987544 78999999999988654

>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1

Probab=98.80  E-value=2.2e-08  Score=64.47  Aligned_cols=101  Identities=12%  Similarity=0.147  Sum_probs=65.5

Q ss_pred             EeeeEEEeCCCCCCCCCCCceEEEEeCCCe---eeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee-
Q psy15292          4 LNTRQSFVHPQYSPSDFRNDVALIKIDKDV---VFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         4 ~~v~~~~~h~~y~~~~~~~diall~l~~~~---~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.+++.|+      ..+|||||+|..++   .|+..+.++||+.......|..+++.|||.....      .+++.. 
T Consensus        80 ~~~~~i~~~~------~~~DIALLkL~~~~~~~~~~~~v~pi~L~~~~~~~~g~~v~v~Gwg~~~~~------~~~~~~~  147 (268)
T 1wcz_A           80 FTAEQITKYS------GEGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQVNQNITVTGYPGDKPV------ATMWESK  147 (268)
T ss_dssp             EEEEEEEECS------SSSCCEEEEECCCTTSCCHHHHSCCCCBCCCSSCCTTCEEEEEECCTTSST------TCEEEEE
T ss_pred             EEEEEEecCC------CCCcEEEEEecCcccccccccccceeecccccccCCCCEEEEEECCCCCCC------ceEEeec
Confidence            3456677764      36899999999986   4677899999986543347889999999965321      122211 


Q ss_pred             --ccCCeEEEEeccceeeccCeeeeecCCCCCCC---CCceEEEEeeccc
Q psy15292         80 --ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL---VGKSATVAGWGRT  124 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~---~g~~~~v~gwg~~  124 (132)
                        +..      +.......  -..+|-++++.++   .|....|..||..
T Consensus       148 g~i~~------~~~~~i~~--~~~~c~GdSGGPLv~~~g~lvGIvS~G~~  189 (268)
T 1wcz_A          148 GKITY------LKGEAMQY--DLSTTGGNSGSPVFNEKNEVIGIHWGGVP  189 (268)
T ss_dssp             EEEEE------EETTEEEE--SBCCCTTCTTCEEECTTSCEEEEEEEEET
T ss_pred             ceEEe------eCCCeEEE--ecccCCCCccCeEEccCCEEEEEEeCCcc
Confidence              110      01111111  1457889998777   4788999999864

>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}

Probab=98.78  E-value=1.4e-07  Score=58.55  Aligned_cols=90  Identities=13%  Similarity=0.136  Sum_probs=58.6

Q ss_pred             CCceEEEEeCC--------CeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee---ccCCeEEEEe
Q psy15292         21 RNDVALIKIDK--------DVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS---ISNDVALIKI   89 (132)
Q Consensus        21 ~~diall~l~~--------~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~---~~~d~c~~~~   89 (132)
                      .+|||||+|..        ++.|++.+.++||+. . ...|+.+++.||+.......    .+ ++.   +.+.     .
T Consensus        76 ~~DiAll~l~~~~~~~~~~~~~~~~~v~~i~l~~-~-~~~g~~v~v~G~p~~~~~~~----~l-~~~~g~v~~~-----~  143 (210)
T 2as9_A           76 DEDISVMNIEEQAVERGPKGFNFNENVQAFNFAK-D-AKVDDKIKVIGYPLPAQNSF----KQ-FESTGTIKRI-----K  143 (210)
T ss_dssp             SSSCEEEEECSEEEEEETTEEEGGGSCCCCCBCS-C-CCTTCEEEEEECSSTTTTTS----CC-EEEEEEEEEE-----E
T ss_pred             CCcEEEEEecCccccccccccccccccceeecCC-C-CCCCCEEEEEeCCCCCCCCc----ce-EEeeeEEccc-----c
Confidence            68999999998        678888999999973 2 23789999999986432211    11 111   1110     0


Q ss_pred             ccceeeccCeeeeecCCCCCCC---CCceEEEEeecccC
Q psy15292         90 DKDVVFKQHIIPVCLPDQTVKL---VGKSATVAGWGRTR  125 (132)
Q Consensus        90 ~~~~~~~~~v~~icl~~~~~~~---~g~~~~v~gwg~~~  125 (132)
                      ...+. .+  ..+|-++++.++   .|....|..||...
T Consensus       144 ~~~i~-~~--~~~~~GdSGGPlv~~~g~lvGI~s~g~~~  179 (210)
T 2as9_A          144 DNILN-FD--AYIEPGNSGSPVLNSNNEVIGVVYGGIGK  179 (210)
T ss_dssp             TTEEE-EE--CCCCTTCTTCEEECTTSCEEEEECCSCCC
T ss_pred             CCeEE-Ec--CccCCCCccCcEECCCCeEEEEEeccccc
Confidence            11111 11  357888998777   58889999999764

>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}

Probab=98.70  E-value=7.2e-08  Score=59.45  Aligned_cols=101  Identities=10%  Similarity=0.166  Sum_probs=61.9

Q ss_pred             EeeeEEEeCCCCCCCCCCCceEEEEeCC--------CeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccc
Q psy15292          4 LNTRQSFVHPQYSPSDFRNDVALIKIDK--------DVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIP   75 (132)
Q Consensus         4 ~~v~~~~~h~~y~~~~~~~diall~l~~--------~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l   75 (132)
                      +.+.+++.|+      ..+|||||+|..        ++.|++.+.|+||+. . ...|+.+++.|||.......    .+
T Consensus        64 ~~~~~i~~~~------~~~DiAll~l~~~~~~~~~~~~~~~~~v~pi~l~~-~-~~~g~~~~~~G~g~~~~~~~----~~  131 (204)
T 2vid_A           64 YSIKKIINYP------GKEDVSVIQVEERAIERGPKGFNFNDNVTPFKYAA-G-AKAGERIKVIGYPHPYKNKY----VL  131 (204)
T ss_dssp             EEEEEEEECS------SSSCCEEEEECSEEEEEETTEEEHHHHCCCCCBCS-C-CCTTCEEEEEECCCCCC--C----CC
T ss_pred             EEeeEEecCC------CCCeEEEEEEcCcccccccccccccccccccccCC-c-CCCCCEEEEEeCCCCCCCCc----ce
Confidence            3455666554      268999999995        566778889999975 2 23788999999997533211    11


Q ss_pred             eeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCC---CCceEEEEeeccc
Q psy15292         76 TYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL---VGKSATVAGWGRT  124 (132)
Q Consensus        76 ~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~---~g~~~~v~gwg~~  124 (132)
                      ....  +..    . ....+..   -..+|-++++.++   .|....|..||..
T Consensus       132 ~~~~g~v~~----~-~~~~~~~---~~~~~~GdSGGPl~~~~g~lvGI~s~g~~  177 (204)
T 2vid_A          132 YESTGPVMS----V-EGSSIVY---SAHTESGNSGSPVLNSNNELVGIHFASDV  177 (204)
T ss_dssp             EEEEEEEEE----E-ETTEEEE---CCCCCGGGTTCEEECTTSCEEEEEEEECC
T ss_pred             EeeccEEee----c-cCCeEEE---ecccCCCCccCcEECCCCeEEEEEecCcc
Confidence            1110  110    0 0011111   1357888888777   4788999999863

>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...

Probab=98.70  E-value=1.4e-08  Score=61.94  Aligned_cols=96  Identities=11%  Similarity=0.036  Sum_probs=61.3

Q ss_pred             CCCceEEEEeCC-CeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--ccCCeEEEEeccceeec
Q psy15292         20 FRNDVALIKIDK-DVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--ISNDVALIKIDKDVVFK   96 (132)
Q Consensus        20 ~~~diall~l~~-~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--~~~d~c~~~~~~~~~~~   96 (132)
                      ..+|||||||+. ++.+++.+++++++.......|+.+.+.||+...     ....++.+.  +.++.|.. +..   +.
T Consensus        60 ~~~DiAll~l~~~~~~~~~~v~~~~l~~~~~~~~g~~v~~~Gw~~~~-----~~g~l~~~~~~v~~~~~~~-~~~---~~  130 (185)
T 2qa9_E           60 PNNDYGIVRYTNTTIPKDGTVGGQDITSAANATVGMAVTRRGSTTGT-----HSGSVTALNATVNYGGGDV-VYG---MI  130 (185)
T ss_dssp             SBSCEEEEEECCSSSCCCCEETTEECCEECCCCTTCEEEEEETTTEE-----EEEEEEEEEEEEECSTTCE-EEE---EE
T ss_pred             CCCCEEEEEecCCCccccCccceeeeCCcccCCCCCEEEEecCCCce-----eEeEEEEEEEEEEcCCCCE-Eec---eE
Confidence            368999999998 8889999999998643333378899999996421     122344433  22222210 111   11


Q ss_pred             cCeeeeecCCCCCCC--CCceEEEEeeccc
Q psy15292         97 QHIIPVCLPDQTVKL--VGKSATVAGWGRT  124 (132)
Q Consensus        97 ~~v~~icl~~~~~~~--~g~~~~v~gwg~~  124 (132)
                      .....+|-++++.++  .+....|..||..
T Consensus       131 ~~~~cac~GDSGGPlv~~~~~vGI~s~g~~  160 (185)
T 2qa9_E          131 RTNVCAEPGDSGGPLYSGTRAIGLTSGGSG  160 (185)
T ss_dssp             EESCCCCTTCTTCEEEETTEEEEEEEEEEE
T ss_pred             EecccCCCCCccceEEECCEEEEEEEecCC
Confidence            222345889998888  5677888889853

>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A

Probab=98.68  E-value=3.3e-08  Score=62.04  Aligned_cols=56  Identities=30%  Similarity=0.684  Sum_probs=45.8

Q ss_pred             ccceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         73 AIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        73 ~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      .|+.|..  ..+|++++++..++.+++.+.++|||.....+ .|..|.++|||.+..++
T Consensus        76 ~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~  134 (227)
T 1iau_A           76 PHPAYNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLG  134 (227)
T ss_dssp             ECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSSSSS
T ss_pred             CCCCCCCCCCCCCeEEEEECCcccCCCceecccCCCCCCCCCCCCEEEEEEcccCCCCC
Confidence            3444433  67899999999999999999999999875543 79999999999987544

>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2

Probab=98.67  E-value=3.3e-08  Score=62.10  Aligned_cols=56  Identities=29%  Similarity=0.594  Sum_probs=45.9

Q ss_pred             ccceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         73 AIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        73 ~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      .|+.|..  ..+|++++++..++.+++.+.++|||.....+ .|..|.++|||.+..++
T Consensus        76 ~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~  134 (227)
T 1euf_A           76 PHPDYNDETLANDIMLLKLTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLGVNM  134 (227)
T ss_dssp             ECTTCCTTTCTTCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEESCBSSTTC
T ss_pred             eCCCCCCCCCcCceEEEEECCcCcCCCceeccCCCCccccCCCCCEEEEEEEccCCCCC
Confidence            3444543  67999999999999999999999999865433 79999999999987554

>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*

Probab=98.66  E-value=2.6e-08  Score=63.17  Aligned_cols=56  Identities=23%  Similarity=0.490  Sum_probs=46.1

Q ss_pred             ccceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         73 AIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        73 ~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      .|+.|..  ..+|++++++..++.+++.+.++||+.....+ .|..|.++|||.+..++
T Consensus        79 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~  137 (245)
T 2f9n_A           79 VHPQFYIIQTGADIALLELEEPVNISSRVHTVMLPPASETFPPGMPCWVTGWGDVDNDE  137 (245)
T ss_dssp             ECTTCCSSCCTTCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCCEEEEESCCSBTTB
T ss_pred             ECCCccCCCCCCcEEEEEeCCCCcCCCCccccCCCCcccCCCCCCEEEEEEeCCCCCCC
Confidence            4555543  67899999999999999999999999865444 79999999999987554

>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2

Probab=98.65  E-value=4.6e-08  Score=61.21  Aligned_cols=56  Identities=30%  Similarity=0.595  Sum_probs=45.9

Q ss_pred             ccceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCC
Q psy15292         73 AIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG  128 (132)
Q Consensus        73 ~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~  128 (132)
                      .|+.|..  ..+|++++++..++.+++.+.++||+.......+..|.++|||.+..++
T Consensus        75 ~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picL~~~~~~~~~~~~~v~GwG~~~~~~  132 (222)
T 1eq9_A           75 VNKNYDDFLLRNDVALVHLTNPIKFNDLVQPIKLSTNDEDLESNPCTLTGWGSTRLGG  132 (222)
T ss_dssp             ECTTCBTTTTBCCCEEEEESSCCCCBTTBCCCEECSCCTTCTTSEEEEEECCCSSTTC
T ss_pred             ECCCCCCCCCCCCEEEEEECCccccCCceEccCCCCCCcCCCCCEEEEEcccccCCCC
Confidence            3444443  6799999999999999999999999987553478999999999987644

>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*

Probab=98.65  E-value=3.7e-08  Score=62.25  Aligned_cols=50  Identities=32%  Similarity=0.689  Sum_probs=43.6

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.+++.+.++|||.....+ .|..|.++|||.+..++.
T Consensus        94 ~~~DIALl~L~~~~~~~~~v~piclp~~~~~~~~~~~~~v~GwG~~~~~~~  144 (241)
T 3ncl_A           94 FDYDIALLELEKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYGGT  144 (241)
T ss_dssp             CTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSC
T ss_pred             CCCcEEEEEECCCCcccCccCceEcCCcccCCCCCCEEEEEEecccCCCCC
Confidence            57899999999999999999999999876544 799999999999876543

>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*

Probab=98.65  E-value=4.9e-08  Score=61.19  Aligned_cols=54  Identities=37%  Similarity=0.664  Sum_probs=44.8

Q ss_pred             ccceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCc
Q psy15292         73 AIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH  126 (132)
Q Consensus        73 ~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~  126 (132)
                      .|+.|..  ..+|++++++..++.+++.+.++|||.....+ .|..|.++|||.+..
T Consensus        76 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~  132 (224)
T 1cgh_A           76 RHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSM  132 (224)
T ss_dssp             ECTTCBTTTTBSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSS
T ss_pred             cCCCCCCCCCcCCEEEEEECCCCcCCCceEeeECCCCCCCCCCCCEEEEEECCcCCC
Confidence            3444543  67899999999999999999999999865433 799999999999873

>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A

Probab=98.64  E-value=5e-08  Score=61.11  Aligned_cols=55  Identities=31%  Similarity=0.619  Sum_probs=45.8

Q ss_pred             cceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         74 IPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        74 ~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      |+.|..  ..+|++++++..++.+++.+.++||+.....+ .|..|.++|||.+..++
T Consensus        78 hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~  135 (227)
T 3fzz_A           78 HPDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPRRNAHVKPGDECYVAGWGKVTPDG  135 (227)
T ss_dssp             CTTCBTTTTBTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSSTTS
T ss_pred             CcCCCCCCCcCCEEEEEECCcCCCCCcccccCCCCcccCCCCCCEEEEEECCcccCCC
Confidence            444433  67899999999999999999999999876544 79999999999987654

>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2

Probab=98.64  E-value=3.7e-08  Score=62.75  Aligned_cols=56  Identities=34%  Similarity=0.573  Sum_probs=45.9

Q ss_pred             ccceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         73 AIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        73 ~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      .|+.|..  ..+|++++++..++.+++.+.++||+.....+ .+..|.++|||.+..++
T Consensus        93 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~  151 (251)
T 1pyt_D           93 VHEKWNSFLVRNDIALIKLAETVELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTNG  151 (251)
T ss_dssp             ECTTCBTTTTBSCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEECBCCCSSCCS
T ss_pred             ECCCCCCCCCCCCEEEEEECCCcccCCCeeeeEcCCCcccCCCCCEEEEEecccCCCCC
Confidence            3444543  67999999999999999999999999865433 68999999999987654

>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}

Probab=98.63  E-value=5.1e-08  Score=61.37  Aligned_cols=55  Identities=25%  Similarity=0.534  Sum_probs=45.3

Q ss_pred             cceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         74 IPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        74 ~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      |+.|..  ..+|++++++..++.+++.+.++|||.....+ .|..|.++|||.+..++
T Consensus        75 hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~  132 (232)
T 2oq5_A           75 HEKYKHPSHDYDISLAELSSPVPYTNAVHRVCLPDASYEFQPGDVMFVTGFGALKNDG  132 (232)
T ss_dssp             CTTCCTTCCTTCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCEEEEEESCCSSTTC
T ss_pred             CCCCCCCCCCCCEEEEEecCCCccCCceeEeECCCccccCCCCCEEEEEECCccCCCC
Confidence            444433  67899999999999999999999999865444 79999999999987654

>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B

Probab=98.63  E-value=5.9e-08  Score=61.11  Aligned_cols=50  Identities=28%  Similarity=0.662  Sum_probs=43.5

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.+++.+.++|||.....+ .|..|.++|||.+..++.
T Consensus        89 ~~~DiALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~  139 (235)
T 4dgj_A           89 KDNDIAMMHLEFKVNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQGT  139 (235)
T ss_dssp             TBTCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSBSSTTCC
T ss_pred             CCCeEEEEEECCccccCCcccccCCCCcccCCCCCCEEEEEecccCCCCCc
Confidence            66899999999999999999999999876544 799999999998876543

>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2

Probab=98.62  E-value=5.1e-08  Score=61.59  Aligned_cols=54  Identities=28%  Similarity=0.648  Sum_probs=45.0

Q ss_pred             cceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCC
Q psy15292         74 IPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG  128 (132)
Q Consensus        74 ~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~  128 (132)
                      |+.|..  ..+|++++++..++.+++.+.++|||..... .+..|.++|||.+..++
T Consensus        85 Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~v~GwG~~~~~~  140 (237)
T 2f91_A           85 HENFDYNLLDNDISLLKLSGSLTFNDNVAPIALPEQGHT-ATGDVIVTGWGTTSEGG  140 (237)
T ss_dssp             CTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCCTTCC-CCSEEEEEESCCSSTTC
T ss_pred             CCCCCCCCCCCcEEEEEECCCcccCCceeeccCCCCCCC-CCCcEEEEECCcCCCCC
Confidence            444433  6799999999999999999999999987554 78899999999987654

>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2

Probab=98.62  E-value=5e-08  Score=61.77  Aligned_cols=47  Identities=36%  Similarity=0.623  Sum_probs=41.4

Q ss_pred             CCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         82 NDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        82 ~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      +|++++++..++.+++.+.++|||.....+ .+..|.++|||.+..++
T Consensus        92 ~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~  139 (241)
T 1bru_P           92 NDIALLKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNG  139 (241)
T ss_dssp             CCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSTTS
T ss_pred             CcEEEEEeCCCcccCCccCCcccCCCcCCCCCCCEEEEEEccccCCCC
Confidence            899999999999999999999999875433 78999999999987654

>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...

Probab=98.62  E-value=4.8e-08  Score=62.03  Aligned_cols=55  Identities=35%  Similarity=0.693  Sum_probs=44.4

Q ss_pred             cceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         74 IPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        74 ~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      |+.|..  ..+|++++++..++.+++.+.++|||.....+ .+..|.++|||.+..++
T Consensus        91 hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~  148 (245)
T 1t8o_A           91 NSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYTN  148 (245)
T ss_dssp             CTTCCTTTCCSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSCC--
T ss_pred             CCCCCCCCCCCCEEEEEECCCCcCCCceeeeECCCCccCCCCCCEEEEEEeCCCCCCC
Confidence            444433  67899999999999999999999999865444 79999999999987654

>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A

Probab=98.62  E-value=5.9e-08  Score=60.74  Aligned_cols=55  Identities=38%  Similarity=0.680  Sum_probs=45.2

Q ss_pred             ccceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCC
Q psy15292         73 AIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG  128 (132)
Q Consensus        73 ~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~  128 (132)
                      .|+.|..  ..+|++++++..++.+++.+.++||+..... .+..|.++|||.+..++
T Consensus        72 ~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~-~~~~~~v~GwG~~~~~~  128 (222)
T 1hj8_A           72 RHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSCAP-AGTMCTVSGWGNTMSST  128 (222)
T ss_dssp             ECTTCBTTTTBSCCEEEEESSCCCCSSSCCCCBCCSSCCC-TTCEEEEEESSCCCCSS
T ss_pred             ECCCCCCCCCCCcEEEEEECCcccCCCceeccCCCCCCCC-CCCEEEEEECCCCCCCC
Confidence            3444443  6799999999999999999999999986533 79999999999987543

>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...

Probab=98.62  E-value=5.9e-08  Score=60.77  Aligned_cols=54  Identities=28%  Similarity=0.667  Sum_probs=44.7

Q ss_pred             ccceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcC
Q psy15292         73 AIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHA  127 (132)
Q Consensus        73 ~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~  127 (132)
                      .|+.|..  ..+|++++++..++.+++.+.++||+..... .|..|.++|||.+..+
T Consensus        72 ~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~-~~~~~~v~GwG~~~~~  127 (223)
T 3mfj_A           72 VHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGNTKSS  127 (223)
T ss_dssp             ECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCSSCCC-TTCEEEEEESSCCCSS
T ss_pred             ECCCCCCCCCCCCEEEEEeCCCcccCCcEeeeECCCCCCC-CCCEEEEEeeeccCCC
Confidence            3444443  6799999999999999999999999987544 7999999999998643

>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*

Probab=98.61  E-value=6.4e-08  Score=61.26  Aligned_cols=56  Identities=25%  Similarity=0.484  Sum_probs=45.7

Q ss_pred             ccceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         73 AIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        73 ~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      .|+.|..  ..+|++++++..++.+++.+.++|||...... .+..|.++|||.+..++
T Consensus        81 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~  139 (241)
T 2any_A           81 IHQNYKVSEGNHDIALIKLQAPLEYTEFQKPISLPSKGDTSTIYTNCWVTGWGFSKEKG  139 (241)
T ss_dssp             ECTTCCTTSSSSCCEEEEESSCCCCBTTBCCCCCCCSSCCSTTCSEEEEEESSCSSTTC
T ss_pred             ECCCCCCCCCCCCeEEEEeCCcccCCCCcceeEcCCcccCCCCCCeEEEEecccCCCCC
Confidence            3444443  67899999999999999999999999865433 79999999999987654

>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2

Probab=98.61  E-value=6.4e-08  Score=60.79  Aligned_cols=54  Identities=22%  Similarity=0.608  Sum_probs=44.9

Q ss_pred             cceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCC
Q psy15292         74 IPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG  128 (132)
Q Consensus        74 ~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~  128 (132)
                      |+.|..  ..+|++++++..++.+++.+.++||+..... .|..|.++|||.+..++
T Consensus        77 Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~-~~~~~~v~GwG~~~~~~  132 (228)
T 1fxy_A           77 HNRFTKETYDFDIAVLRLKTPITFRMNVAPASLPTAPPA-TGTKCLISGWGNTASSG  132 (228)
T ss_dssp             CTTCBTTTTBTCCEEEEESSCCCCBTTBCCCCCCSSCCC-TTCEEEEEESSCCCSSS
T ss_pred             CCCCCCCCCcCcEEEEEECCcccCCCceeccCCCCCCCC-CCCEEEEEecCccCCCC
Confidence            444433  6789999999999999999999999986544 79999999999987654

>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A

Probab=98.60  E-value=6.6e-08  Score=60.93  Aligned_cols=56  Identities=25%  Similarity=0.529  Sum_probs=45.8

Q ss_pred             ccceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         73 AIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        73 ~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      .|+.|..  ..+|++++++..++.+++.+.++||+.....+ .|..|.++|||.+..++
T Consensus        74 ~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~  132 (234)
T 1orf_A           74 PYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHNSA  132 (234)
T ss_dssp             ECTTCCTTTCTTCCEEEEESSCCCCSSSSCCCCCCSSCCCCCTTCEEEEEESSCSSSSS
T ss_pred             cCCCCCCCCCCCCEEEEEECCcCccCCCeeeeecCCCcCCCCCCCEEEEEECCcCCCCC
Confidence            3444433  67999999999999999999999999875533 79999999999987654

>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}

Probab=98.59  E-value=5.5e-08  Score=65.87  Aligned_cols=55  Identities=27%  Similarity=0.569  Sum_probs=45.6

Q ss_pred             ccceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcC
Q psy15292         73 AIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHA  127 (132)
Q Consensus        73 ~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~  127 (132)
                      .|+.|..  ..+|++++++..++.+++.+.++|||.....+.+..|.++|||.+..+
T Consensus       219 ~Hp~y~~~~~~nDIALL~L~~pv~~~~~v~PicLp~~~~~~~~~~~~v~GWG~t~~~  275 (394)
T 2b9l_A          219 IHSNFNPKTVVNDVALLLLDRPLVQADNIGTICLPQQSQIFDSTECFASGWGKKEFG  275 (394)
T ss_dssp             ECTTCCTTTCTTCCEEEEESSCCBCCTTCCCCBCCCTTCCCCCSCEEEEECCTTTTT
T ss_pred             ECCCCCCCccccceEEEEecCccccCCceeeeEcCCcccCccCCEEEEEeccCccCC
Confidence            3444543  678999999999999999999999998755557889999999998754

>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C

Probab=98.59  E-value=5.9e-08  Score=61.37  Aligned_cols=58  Identities=26%  Similarity=0.465  Sum_probs=46.7

Q ss_pred             ccccceeee--cc--CCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         71 SSAIPTYVS--IS--NDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        71 ~~~~l~~~~--~~--~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      ...|+.|..  ..  +|++++++..++.+++.+.++|||.....+ .+..|.++|||.+..++
T Consensus        77 i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~  139 (240)
T 1fon_A           77 LFVHPLWNSNCVACGNDIALVKLSRSAQLGDKVQLANLPPAGDILPNEAPCYISGWGRLYTGG  139 (240)
T ss_dssp             EEECTTCCTTCGGGCCCCEEEECSSCCCCTTSCCCCBCCCTTCCCCTTCCCEEEECTTCCCSS
T ss_pred             EEECCCCcCCCccCCCCEEEEEecCccccCCcccccCCCCcccCCCCCCeEEEEEEeEcCCCC
Confidence            345555544  45  999999999999999999999999875433 78999999999987654

>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*

Probab=98.59  E-value=5.8e-08  Score=65.29  Aligned_cols=49  Identities=43%  Similarity=0.735  Sum_probs=43.0

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++.+++.+.++|||.....+ .|..|.++|||.+...+
T Consensus       209 ~~nDIALlkL~~pv~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~  258 (372)
T 1z8g_A          209 NSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYG  258 (372)
T ss_dssp             CTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTS
T ss_pred             CCccEEEEEECCCCCCCCceeccccCCcccCCCCCCEEEEEecCCCCCCC
Confidence            67899999999999999999999999865444 79999999999987654

>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*

Probab=98.59  E-value=9.6e-08  Score=59.59  Aligned_cols=49  Identities=20%  Similarity=0.445  Sum_probs=43.1

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++.+++.+.++||+.....+ .+..|.++|||.+..++
T Consensus        85 ~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~  134 (218)
T 2z7f_E           85 LLNDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNR  134 (218)
T ss_dssp             TBSCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCEEEEEESSBCSSSC
T ss_pred             CCCCEEEEEECCcCcCCCceeccCcCCCCCCCCCCCEEEEEEeCCCCCCC
Confidence            67899999999999999999999999875544 79999999999987654

>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}

Probab=98.58  E-value=1.1e-07  Score=61.43  Aligned_cols=48  Identities=44%  Similarity=0.862  Sum_probs=41.8

Q ss_pred             cCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         81 SNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        81 ~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      .+|++++++..++.+++.+.++|||...... .|..|.++|||.+..+.
T Consensus       131 ~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GWG~t~~~~  179 (278)
T 2olg_A          131 YHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRTETGQ  179 (278)
T ss_dssp             TTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSSCC
T ss_pred             CCeEEEEEECCCCcCCCCcCccCcCCCCCCcCCCCEEEEEcCCcCCCCC
Confidence            6899999999999999999999999875433 79999999999987543

>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A

Probab=98.58  E-value=2.6e-07  Score=56.84  Aligned_cols=89  Identities=11%  Similarity=0.132  Sum_probs=56.5

Q ss_pred             CCceEEEEeCCC----eeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee---ccCCeEEEEeccce
Q psy15292         21 RNDVALIKIDKD----VVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS---ISNDVALIKIDKDV   93 (132)
Q Consensus        21 ~~diall~l~~~----~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~---~~~d~c~~~~~~~~   93 (132)
                      .+|||||+|..+    +.|++.++|+||+. .. ..|+.+++.||+........     +++.   +.+  +   . ...
T Consensus        76 ~~DiAll~l~~~~~~~~~~~~~v~pi~l~~-~~-~~g~~v~v~G~p~g~~~~~~-----~~~~~g~v~~--~---~-~~~  142 (200)
T 2w7s_A           76 KEDLAIVHVHETSTEGLNFNKNVSYTKFAD-GA-KVKDRISVIGYPKGAQTKYK-----MFESTGTINH--I---S-GTF  142 (200)
T ss_dssp             SSSCEEEEECSBCTTSCBGGGSCCCCCBCC-CC-CTTCEEEEEECTTHHHHTSC-----EEEEEEEEEE--E---E-TTE
T ss_pred             cceEEEEEECCCCCCcccccccccceeccc-cC-CCCCEEEEEECCCCCCCccc-----eEEeEEEEEc--c---C-CCE
Confidence            589999999985    88888999999973 22 37889999998642111110     1111   111  0   0 111


Q ss_pred             eeccCeeeeecCCCCCCC---CCceEEEEeeccc
Q psy15292         94 VFKQHIIPVCLPDQTVKL---VGKSATVAGWGRT  124 (132)
Q Consensus        94 ~~~~~v~~icl~~~~~~~---~g~~~~v~gwg~~  124 (132)
                      ...+  ..+|-++++.++   .|....|..||..
T Consensus       143 ~~~~--~~~~~GdSGGPl~~~~g~lvGI~s~g~~  174 (200)
T 2w7s_A          143 MEFD--AYAQPGNSGSPVLNSKHELIGILYAGSG  174 (200)
T ss_dssp             EEEC--SCCCTTCTTCEEECTTSCEEEEEEEEC-
T ss_pred             EEEc--ceeCCCCccCeEECcCCEEEEEEecccc
Confidence            1111  357889998877   4788999999864

>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...

Probab=98.57  E-value=6.6e-08  Score=61.11  Aligned_cols=56  Identities=23%  Similarity=0.443  Sum_probs=45.6

Q ss_pred             ccceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         73 AIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        73 ~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      .|+.|..  ..+|++++++..++.+++.+.++|||...... .+..|.++|||.+..++
T Consensus        81 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~  139 (238)
T 3bg8_A           81 IHDQYKMAESGYDIALLKLETTVNYTDSQRPISLPSKGERNVIYTDCWVTGWGYRKLRD  139 (238)
T ss_dssp             ECTTCCCGGGSCCCEEEEESSCCCCBTTBCCCBCCCGGGGSSCCCCEEEEESCCSSSSC
T ss_pred             ECCCCCCCCCCCcEEEEEECCccccCCCcccCCCCCCccCcCCCCeEEEEecCCCCCCC
Confidence            3444543  67899999999999999999999999865433 68899999999887654

>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A

Probab=98.57  E-value=7.9e-08  Score=60.25  Aligned_cols=53  Identities=30%  Similarity=0.562  Sum_probs=44.4

Q ss_pred             ccceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCc
Q psy15292         73 AIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH  126 (132)
Q Consensus        73 ~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~  126 (132)
                      .|+.|..  ..+|++++++..++.+++.+.++||+..... .|..|.++|||.+..
T Consensus        71 ~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~-~~~~~~v~GwG~~~~  125 (224)
T 2qxi_A           71 RHPGYSTQTHVNDLMLVKLNSQARLSSMVKKVRLPSRCEP-PGTTCTVSGWGTTTS  125 (224)
T ss_dssp             ECTTCCTTTCTTCCEEEECSSCCCCBTTBCCCCCCSSCCC-TTCEEEEEESSCSSS
T ss_pred             ECCCCCCCCCcCcEEEEEeCCCCcCCCceeeEECCCCCCC-CCCEEEEEeCCccCC
Confidence            3445543  6789999999999999999999999987544 799999999999864

>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*

Probab=98.57  E-value=8.8e-08  Score=62.33  Aligned_cols=56  Identities=34%  Similarity=0.515  Sum_probs=45.0

Q ss_pred             ccceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCC--CCCceEEEEeecccCcCC
Q psy15292         73 AIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVK--LVGKSATVAGWGRTRHAG  128 (132)
Q Consensus        73 ~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~--~~g~~~~v~gwg~~~~~~  128 (132)
                      .|..|..  ..+|++++++..++.+++.+.++||+.....  ..+..|.++|||.+..++
T Consensus        89 ~Hp~y~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~~~~~v~GWG~~~~~~  148 (290)
T 1fiw_A           89 IHEKYSASSEANDIALMKITPPVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENA  148 (290)
T ss_dssp             ECTTCBTTTTBTCCEEEEEESCCCCBTTBCCCBCCCTTCCSCCSSCEEEEEESCCSSTTC
T ss_pred             ECCCCCCCCCCCCEEEEEECCccccCCccccccCCCccccCcCCCCeEEEEEeccCCCCC
Confidence            3445543  6799999999999999999999999975332  258999999999987654

>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}

Probab=98.56  E-value=1e-07  Score=60.18  Aligned_cols=50  Identities=30%  Similarity=0.659  Sum_probs=43.3

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.+++.+.++||+.....+.+..|.++|||.+..++.
T Consensus        88 ~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~  137 (238)
T 1ym0_A           88 LENDVSVIKTAVAITFDINVGPICAPDPANDYVYRKSQCSGWGTINSGGV  137 (238)
T ss_dssp             CTTCCEEEEESSCCCCSSSCCCCBCCCTTCCCTTCEEEEEESCCSSTTCC
T ss_pred             CcccEEEEEeCCCccccCcccccCCCCCcCCCCCCceEEEeecCCCCCCC
Confidence            67899999999999999999999999865444789999999999876543

>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...

Probab=98.56  E-value=9.6e-08  Score=59.70  Aligned_cols=54  Identities=30%  Similarity=0.707  Sum_probs=45.0

Q ss_pred             cceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCC
Q psy15292         74 IPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG  128 (132)
Q Consensus        74 ~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~  128 (132)
                      |+.|..  ..+|++++++..++.+++.+.++||+..... .|..|.++|||.+..++
T Consensus        73 hp~y~~~~~~~DIAll~L~~~~~~~~~v~pi~l~~~~~~-~~~~~~v~GwG~~~~~~  128 (223)
T 4i8h_A           73 HPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGNTKSSG  128 (223)
T ss_dssp             CTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCSSCCC-TTCEEEEEESSCCCSSS
T ss_pred             CcCCCCCCCcCCEEEEEECCcCcCCCceeceECCCCCCC-CCCEEEEEecccccCCC
Confidence            444433  5789999999999999999999999987644 79999999999987654

>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...

Probab=98.56  E-value=9e-08  Score=60.55  Aligned_cols=48  Identities=27%  Similarity=0.517  Sum_probs=42.2

Q ss_pred             cCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         81 SNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        81 ~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      .+|++++++..++.+++.+.++|||.....+ .+..|.++|||.+..++
T Consensus        91 ~~DIALl~L~~~v~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~  139 (240)
T 1gvk_B           91 GYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNG  139 (240)
T ss_dssp             CCCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCCEEEEESCBSSTTC
T ss_pred             CCcEEEEEECCccccCCCccceecCCCCCCCCCCCEEEEEecCcCCCCC
Confidence            7899999999999999999999999875433 78999999999987654

>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A

Probab=98.56  E-value=1.4e-07  Score=59.75  Aligned_cols=56  Identities=34%  Similarity=0.681  Sum_probs=45.7

Q ss_pred             ccceeee---ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         73 AIPTYVS---ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        73 ~~l~~~~---~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      .|+.|..   ..+|++++++..++.+++.+.++|||.....+ .|..|.++|||.+..++
T Consensus        73 ~Hp~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~  132 (240)
T 2zgc_A           73 QHPRYKPVPALENDLALLQLDGKVKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLTHQGG  132 (240)
T ss_dssp             ECTTCBCTTSCBSCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEECCBSSTTC
T ss_pred             ECCCCCCCCCCcccEEEEEeCCcccCCCceeeeEcCCCCCCCCCCCEEEEEECCcccCCC
Confidence            4455543   56899999999999999999999999865433 79999999999987544

>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*

Probab=98.55  E-value=1.1e-07  Score=59.66  Aligned_cols=55  Identities=27%  Similarity=0.559  Sum_probs=44.9

Q ss_pred             ccceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCC
Q psy15292         73 AIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG  128 (132)
Q Consensus        73 ~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~  128 (132)
                      .|+.|..  ..+|++++++..++.+++.+.++||+..... .+..|.++|||.+..++
T Consensus        75 ~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~-~~~~~~v~GwG~~~~~~  131 (227)
T 2psx_A           75 PHPGYSHPGHSNDLMLIKLNRRIRPTKDVRPINVSSHCPS-AGTKCLVSGWGTTKSPQ  131 (227)
T ss_dssp             ECTTCCSSSCTTCCEEEEESSCCCCCSSSCCCCBCSSCCC-TTCEEEEEESSCSSSSS
T ss_pred             eCCCCCCCCCCCCEEEEEeCCCCCCCCceeeeECCCCCCC-CCCEEEEEeCcccCCCC
Confidence            3444443  6789999999999999999999999975433 79999999999987654

>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2

Probab=98.55  E-value=1.2e-07  Score=59.51  Aligned_cols=54  Identities=37%  Similarity=0.586  Sum_probs=45.1

Q ss_pred             ccceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcC
Q psy15292         73 AIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHA  127 (132)
Q Consensus        73 ~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~  127 (132)
                      .|+.|..  ..+|++++++..++.+++.+.++||+..... .|..|.++|||.+..+
T Consensus        75 ~hp~y~~~~~~~DiALl~L~~~~~~~~~v~picL~~~~~~-~~~~~~v~GwG~~~~~  130 (226)
T 1azz_A           75 VHENYNSFVISNDIAVIRLPVPVTLTAAIATVGLPSTDVG-VGTVVTPTGWGLPSDS  130 (226)
T ss_dssp             ECTTCBTTTTBSCCEEEECSSCCCCCSSSCCCBCCSSCCC-TTCEEEEEESSCSSTT
T ss_pred             ECCCCCCCCCCCceEEEEECCccccCCCcccccCCCCCCC-CCCEEEEEeCCccCCC
Confidence            4445544  6799999999999999999999999986543 7999999999988764

>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A

Probab=98.55  E-value=1.3e-07  Score=59.73  Aligned_cols=49  Identities=27%  Similarity=0.493  Sum_probs=42.2

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++.+++.+.++||+.......|..|.++|||.+..++
T Consensus        89 ~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~v~GwG~~~~~~  137 (240)
T 1mza_A           89 QSNDIMLVKLQTAAKLNKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDS  137 (240)
T ss_dssp             SSSCCEEEEESSCCCCBTTBCCCCBCSSCCCCTTCEEEEEECCCSSTTC
T ss_pred             CCceEEEEEeCCCcccCCceeeeecCCcccCCCCCEEEEEeCCcCCCCC
Confidence            6799999999999999999999999984333379999999999987654

>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*

Probab=98.54  E-value=1e-07  Score=59.71  Aligned_cols=47  Identities=32%  Similarity=0.574  Sum_probs=41.7

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~  127 (132)
                      ..+|++++++..++.+++.+.++||+..... .|..|.++|||.+..+
T Consensus        83 ~~~DIALl~L~~~v~~~~~v~pi~l~~~~~~-~~~~~~v~GwG~~~~~  129 (223)
T 2bdg_A           83 LANDLMLIKLDESVSESDTIRSISIASQCPT-AGNSCLVSGWGLLANG  129 (223)
T ss_dssp             TCSCCEEEEESSCCCCCSSCCCCCBCSSCCC-TTCEEEEEESCCCTTS
T ss_pred             CcCcEEEEEECCcccCCCceecccCCCCCCC-CCCEEEEEeCcccCCC
Confidence            6789999999999999999999999986543 7999999999988754

>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A

Probab=98.52  E-value=1e-07  Score=59.81  Aligned_cols=55  Identities=25%  Similarity=0.490  Sum_probs=43.9

Q ss_pred             cceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         74 IPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        74 ~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      |+.|..  ..+|++++++..++.+++.+.++||+.....+ .|..|.++|||.+..++
T Consensus        78 hp~y~~~~~~~DIAll~L~~~~~~~~~v~pi~l~~~~~~~~~g~~~~v~GwG~~~~~~  135 (228)
T 2xw9_A           78 HPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAG  135 (228)
T ss_dssp             CTTCCTTCCTTCCEEEEESSCCCCBTTBCCCCBCCSCCCCCTTC-CEEEESSCCSTTC
T ss_pred             CCCCCCCCCCCcEEEEEeCCCcccCCCeeecccCCcccCCCCCCEEEEEEecccCCCC
Confidence            444433  67999999999999999999999999854333 79999999999987654

>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*

Probab=98.52  E-value=1.2e-07  Score=60.57  Aligned_cols=56  Identities=29%  Similarity=0.643  Sum_probs=45.8

Q ss_pred             ccceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         73 AIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        73 ~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      .|+.|..  ..+|++++++..++.+++.+.++|||.....+ .|..|.++|||.+..+.
T Consensus        78 ~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~  136 (261)
T 3gyl_B           78 PHPSYLQEGSQGDIALLQLSRPITFSRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSV  136 (261)
T ss_dssp             ECTTCCSTTCSCCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTB
T ss_pred             ECCCcCCCCCCCcEEEEEECCCccCCCceeccCCCCcccCCCCCCEEEEEecCCCCCCC
Confidence            3444433  67899999999999999999999999865554 79999999999887543

>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*

Probab=98.52  E-value=1.7e-07  Score=58.92  Aligned_cols=47  Identities=30%  Similarity=0.644  Sum_probs=41.7

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~  127 (132)
                      ..+|++++++..++.+++.+.++||+..... .|..|.++|||.+...
T Consensus        82 ~~~DIALl~L~~~v~~~~~v~picL~~~~~~-~~~~~~v~GwG~~~~~  128 (231)
T 2aiq_A           82 WDKDIMLIRLNRPVRNSAHIAPLSLPSNPPS-VGSVCRIMGWGTITSP  128 (231)
T ss_dssp             TTTCCEEEEESSCCCCBTTBCCCCCCSSCCC-TTCEEEEEESSCSSSS
T ss_pred             CCCCEEEEEecCCCCCCCcEEeeECCCCCCC-CCCEEEEEeCCccCCC
Confidence            6789999999999999999999999987554 7999999999988754

>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A

Probab=98.51  E-value=1e-07  Score=59.67  Aligned_cols=55  Identities=27%  Similarity=0.504  Sum_probs=42.4

Q ss_pred             cceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         74 IPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        74 ~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      |+.|..  ..+|++++++..++.++..+.++|++.....+ .|..|.++|||.+...+
T Consensus        78 hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~  135 (226)
T 4ag1_A           78 HPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLK  135 (226)
T ss_dssp             CTTCCTTTCTTCCEEEEESSCCCCCSSSCCCCCC-----CCTTCEEEEEESSBSSTTS
T ss_pred             CCCCCCCCCcCcEEEEEECCCCccCCceeccccCCcccCCCCCCEEEEEECCCCCCCC
Confidence            444433  67899999999999999999999999875533 79999999999987654

>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}

Probab=98.51  E-value=2.2e-07  Score=58.55  Aligned_cols=49  Identities=29%  Similarity=0.700  Sum_probs=42.4

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++.+++.+.++|||.....+ .|..|.++|||.+..++
T Consensus        82 ~~~DiALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~  131 (234)
T 2asu_B           82 SGSQLVLLKLERSVTLNQRVALICLPPEWYVVPPGTKCEIAGWGETKGTG  131 (234)
T ss_dssp             TTCCEEEEEESSCCCCSSSSCCCBCCCTTCCCCTTCEEEEEESSCCTTSS
T ss_pred             CCCCeEEEEeCCcCcCCCcEeccCCCCccccCCCCCEEEEEeCCccCCCC
Confidence            46899999999999999999999999865433 79999999999987654

>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2

Probab=98.50  E-value=1.7e-07  Score=59.31  Aligned_cols=49  Identities=27%  Similarity=0.601  Sum_probs=42.4

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCC-CCCCCCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQ-TVKLVGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~-~~~~~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++.+++.+.++||+.. ...+.|..|.++|||.+..++
T Consensus        90 ~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~  139 (241)
T 1m9u_A           90 YSNDIAILHLATSISLGGNIQAAVLPANNNNDYAGTTCVISGWGRTDGTN  139 (241)
T ss_dssp             TTTCCEEEEESSCCCCCSSCCCCCCCSCSSCCCTTCEEEEEESSCSSSSS
T ss_pred             ccccEEEEEecCccccCCCccccCcCCCcCCCCCCCEEEEEeCcccCCCC
Confidence            6789999999999999999999999987 333379999999999987654

>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*

Probab=98.50  E-value=2.1e-07  Score=58.76  Aligned_cols=46  Identities=26%  Similarity=0.585  Sum_probs=41.5

Q ss_pred             cCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcC
Q psy15292         81 SNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHA  127 (132)
Q Consensus        81 ~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~  127 (132)
                      .+|++++++..++.+++.+.++||+..... .|..|.++|||.+..+
T Consensus        94 ~~DIALl~L~~~~~~~~~v~picL~~~~~~-~~~~~~v~GwG~~~~~  139 (237)
T 1ao5_A           94 SDDLMLLRLSKPADITDVVKPIALPTKEPK-PGSKCLASGWGSITPT  139 (237)
T ss_dssp             TTCCEEEEESSCCCCCSSSCCCCCCCSCCC-TTCEEEEEESCCSSCC
T ss_pred             CCCEEEEEeCCccccCCceeCCCcCCCCCC-CCCEEEEEECCccCCC
Confidence            799999999999999999999999987544 7999999999998765

>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2

Probab=98.50  E-value=1.8e-07  Score=59.04  Aligned_cols=48  Identities=23%  Similarity=0.545  Sum_probs=41.9

Q ss_pred             cCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         81 SNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        81 ~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      .+|++++++..++.+++.+.++||+.....+ .+..|.++|||.+..++
T Consensus        91 ~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~  139 (236)
T 1elt_A           91 GYDIALLRLNTQASLNSAVQLAALPPSNQILPNNNPCYITGWGKTSTGG  139 (236)
T ss_dssp             CCCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCCEEEEESCCSSTTC
T ss_pred             CccEEEEECCCCCccCCcEEeccCCCccccCCCCCEEEEEeCCCcCCCC
Confidence            7899999999999999999999999865433 78999999999987654

>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*

Probab=98.50  E-value=1.9e-07  Score=59.41  Aligned_cols=56  Identities=21%  Similarity=0.430  Sum_probs=45.0

Q ss_pred             ccceeee--ccCCeEEEEeccc----eeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         73 AIPTYVS--ISNDVALIKIDKD----VVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        73 ~~l~~~~--~~~d~c~~~~~~~----~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      .|+.|..  ..+|++++++..+    +.+++.+.++|||.....+ .+..|.++|||.+...+
T Consensus        84 ~Hp~y~~~~~~~DIALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~  146 (252)
T 1rtf_B           84 VHKEFDDDTYDNDIALLQLKSDSSRCAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALS  146 (252)
T ss_dssp             ECTTCCTTTCTTCCEEEEECCSSSCCSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTC
T ss_pred             eCCCCCcCCCCCCEEEEEECCccccccccCCceeceeCCCccccCCCCCEEEEEEcCCCCCCC
Confidence            3444443  6789999999999    8889999999999865444 68999999999887543

>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2

Probab=98.50  E-value=2.5e-07  Score=57.73  Aligned_cols=49  Identities=27%  Similarity=0.473  Sum_probs=42.9

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++.+++.+.++||+.....+ .|..|.++|||.+..++
T Consensus        88 ~~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~~~GwG~~~~~~  137 (221)
T 1fuj_A           88 KLNDILLIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHD  137 (221)
T ss_dssp             TBCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSCSSS
T ss_pred             CcccEEEEEeCCccccCCcceeeECCCCcCCCCCCCEEEEEEeCCCCCCC
Confidence            67899999999999999999999999876543 79999999999987544

>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*

Probab=98.50  E-value=1.9e-07  Score=58.45  Aligned_cols=52  Identities=23%  Similarity=0.480  Sum_probs=43.8

Q ss_pred             ccceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccC
Q psy15292         73 AIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTR  125 (132)
Q Consensus        73 ~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~  125 (132)
                      .|+.|..  ..+|++++++..++.+++.+.++||+..... .+..|.++|||.+.
T Consensus        73 ~Hp~y~~~~~~~DIAll~L~~~~~~~~~v~pi~l~~~~~~-~~~~~~v~GwG~~~  126 (223)
T 1lo6_A           73 IHPDYDAASHDQDIMLLRLARPAKLSELIQPLPLERDCSA-NTTSCHILGWGKTA  126 (223)
T ss_dssp             ECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCCBCCCTTC-CCCEEEEEESSCCT
T ss_pred             ECCCCCCCCCcCeEEEEEECCcccCCCceeecccCCCCCC-CCCEEEEEEECCCC
Confidence            3444443  6799999999999999999999999987544 79999999999986

>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*

Probab=98.49  E-value=2e-07  Score=58.56  Aligned_cols=47  Identities=34%  Similarity=0.711  Sum_probs=42.1

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~  127 (132)
                      ..+|++++++..++.+++.+.++||+..... .|..|.++|||.+...
T Consensus        83 ~~~DIALl~L~~~v~~~~~v~pi~l~~~~~~-~~~~~~v~GwG~~~~~  129 (234)
T 3s69_A           83 LDKDIMLIKLDSRVSNSEHIVPLSLPSSPPS-VGSVCHIMGWGSITPI  129 (234)
T ss_dssp             TSSCCEEEEESSCCCCBTTBCCCCCCSSCCC-TTCEEEEEESSCSSSS
T ss_pred             CcccEEEEeeCCcCCCCCcceeeecCCCCCC-CCCEEEEEECCCCCCC
Confidence            6789999999999999999999999987655 6999999999998764

>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}

Probab=98.49  E-value=1.1e-07  Score=64.72  Aligned_cols=55  Identities=35%  Similarity=0.651  Sum_probs=45.1

Q ss_pred             cceeee--ccCCeEEEEeccceeeccCeeeeecCCCCC----CCCCceEEEEeecccCcCC
Q psy15292         74 IPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTV----KLVGKSATVAGWGRTRHAG  128 (132)
Q Consensus        74 ~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~----~~~g~~~~v~gwg~~~~~~  128 (132)
                      |+.|..  ..+|++++++..++.+++.+.+||||....    ...+..|.|+|||.+..++
T Consensus       212 Hp~y~~~~~~nDIALL~L~~~v~~~~~V~PICLp~~~~~~~~~~~~~~~~v~GWG~t~~~~  272 (408)
T 2xxl_A          212 HEKYDARHIMHDIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTENGS  272 (408)
T ss_dssp             CTTCBTTTTBSCCEEEEESSCCCCBTTBCCCBCCCSHHHHHHTTTCSEEEEEECCCBTTBC
T ss_pred             CCCCCccccccceEEEEECCccccccCccccCCCCcccccccccCCCEEEEEEeCcCCCCC
Confidence            444543  679999999999999999999999997642    2378999999999987654

>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*

Probab=98.48  E-value=3e-07  Score=57.55  Aligned_cols=49  Identities=31%  Similarity=0.606  Sum_probs=42.9

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++.+++.+.++||+.....+ .|..|.++|||.+..++
T Consensus        86 ~~~DIALl~L~~~~~~~~~v~pi~L~~~~~~~~~~~~~~v~GwG~~~~~~  135 (225)
T 1a7s_A           86 NLNDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGG  135 (225)
T ss_dssp             TBSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESCCSSTTC
T ss_pred             CcCCEEEEEcCCcccCCCceeEEEcCCCcCCCCCCCEEEEEeCCcCCCCC
Confidence            67899999999999999999999999876543 79999999999987654

>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2

Probab=98.48  E-value=9.7e-08  Score=59.69  Aligned_cols=49  Identities=29%  Similarity=0.447  Sum_probs=42.5

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++.+++.+.++||+.....+ .|..|.++|||.+..++
T Consensus        86 ~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~  135 (224)
T 3rp2_A           86 NLHDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTGVRD  135 (224)
T ss_dssp             CCSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSEEETTE
T ss_pred             CCccEEEEEcCCCcccCCcccceecCCcccCCCCCCEEEEEeCCCCCCCC
Confidence            66899999999999999999999999876543 79999999999886543

>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B

Probab=98.48  E-value=2e-07  Score=59.12  Aligned_cols=55  Identities=31%  Similarity=0.666  Sum_probs=45.4

Q ss_pred             ccceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCC
Q psy15292         73 AIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG  128 (132)
Q Consensus        73 ~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~  128 (132)
                      .|+.|..  ..+|++++++..++.+++.+.++||+..... .+..|.++|||.+..+.
T Consensus        92 ~hp~y~~~~~~~DIAll~L~~~~~~~~~v~picLp~~~~~-~~~~~~v~GwG~~~~~~  148 (251)
T 3gov_B           92 LHPQYDPNTFENDVALVELLESPVLNAFVMPICLPEGPQQ-EGAMVIVSGWGKQFLQR  148 (251)
T ss_dssp             ECTTCBTTTTBTCCEEEEESSCCCCSSSCCCCBCCSSCCC-TTCEEEEEECSCCTTSC
T ss_pred             ECCCCCCCCCCCCEEEEEeCCcccCCCceEEeECCCCCCC-CCCEEEEEcCCCCCCCC
Confidence            3444443  6799999999999999999999999987554 79999999999886543

>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}

Probab=98.48  E-value=2.5e-07  Score=58.29  Aligned_cols=47  Identities=34%  Similarity=0.672  Sum_probs=42.0

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~  127 (132)
                      ..+|++++++..++.+++.+.++||+..... .|..|.++|||.+...
T Consensus        85 ~~~DIALl~L~~~v~~~~~v~pi~l~~~~~~-~~~~~~v~GwG~~~~~  131 (238)
T 4e7n_A           85 WDKDIMLIRLDSPVKNSKHIAPFSLPSSPPS-VGSVCRIMGWGRISPT  131 (238)
T ss_dssp             SSCCCEEEEESSCCCCBTTBCCCCCCSSCCC-TTCEEEEEESSCSSSS
T ss_pred             CCCcEEEEEeCCCccCCCceeeeeCCCCCCC-CCCEEEEEECCCCCCC
Confidence            6789999999999999999999999987555 6999999999998754

>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*

Probab=98.46  E-value=3.2e-07  Score=57.86  Aligned_cols=47  Identities=21%  Similarity=0.479  Sum_probs=41.5

Q ss_pred             cCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCC
Q psy15292         81 SNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG  128 (132)
Q Consensus        81 ~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~  128 (132)
                      .+|++++++..++.+++.+.++||+..... .|..|.++|||.+..++
T Consensus        94 ~~DIALl~L~~~~~~~~~v~pi~Lp~~~~~-~~~~~~v~GwG~~~~~~  140 (237)
T 2zch_P           94 SHDLMLLRLSEPAELTDAVKVMDLPTQEPA-LGTTCYASGWGSIEPEE  140 (237)
T ss_dssp             TTCCEEEEESSCCCCCSSCCCCCCCSSCCC-TTCEEEEEESCCSSSSS
T ss_pred             CcceEEEEeCCCCccCCcEeeeECCCCCCC-CCCEEEEEeCCccCCCC
Confidence            689999999999999999999999986433 79999999999987654

>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*

Probab=98.44  E-value=2.5e-07  Score=58.18  Aligned_cols=47  Identities=32%  Similarity=0.776  Sum_probs=42.0

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~  127 (132)
                      ..+|++++++..++.+++.+.++||+..... .|..|.++|||.+...
T Consensus        85 ~~~DIALl~L~~~v~~~~~v~pi~L~~~~~~-~~~~~~v~GwG~~~~~  131 (234)
T 3s9c_A           85 LDKDIMLIRLRRPVTYSTHIAPVSLPSRSRG-VGSRCRIMGWGKISTT  131 (234)
T ss_dssp             GGGCCEEEEESSCCCCBTTBCCCBCCSSCCC-TTCEEEEEESSCSBTT
T ss_pred             CcCceEEEEECCccccCCcccccccCCCCCC-CCCeEEEEeeCCCCCC
Confidence            6789999999999999999999999987655 6999999999988754

>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*

Probab=98.44  E-value=4.6e-07  Score=57.52  Aligned_cols=49  Identities=29%  Similarity=0.666  Sum_probs=42.0

Q ss_pred             ccCCeEEEEeccc----eeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKD----VVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~----~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..+    +.+++.+.++|||.....+ .|..|.++|||.+..++
T Consensus        87 ~~~DiALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~  140 (248)
T 2r0l_A           87 SDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENV  140 (248)
T ss_dssp             TTTCCEEEEECCSSSCSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSC
T ss_pred             CCCCEEEEEeCCcccccccCCCcEEEEECCCCCCCCCCCCEEEEEEccccCCCC
Confidence            5789999999998    7889999999999865444 79999999999987654

>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}

Probab=98.44  E-value=3.4e-07  Score=61.05  Aligned_cols=50  Identities=32%  Similarity=0.700  Sum_probs=42.9

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.+++.+.++|||.......|..|.++|||.+.....
T Consensus       184 ~~nDIALlkL~~~v~~~~~v~PicLp~~~~~~~g~~~~v~GWG~~~~~~~  233 (347)
T 4f4o_C          184 STVDIGLIKLKQKVPVNERVMPICLPSKDYVNVGLVGYVSGWGRNANLNF  233 (347)
T ss_dssp             TTCCCEEEEESSCCCCSSSCCCCBCCSSCCCCTTCEEEEEECSBCTTSSB
T ss_pred             CCCCEEEEEECCCccCCCceeeeecCccccCCCCcEEEEeccccCCCCCC
Confidence            46899999999999999999999999865444799999999998875543

>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2

Probab=98.43  E-value=4.4e-07  Score=57.19  Aligned_cols=47  Identities=28%  Similarity=0.513  Sum_probs=41.5

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~  127 (132)
                      ..+|++++++..++.+++.+.++||+..... .|..|.++|||.+..+
T Consensus        91 ~~~DIALl~L~~~~~~~~~v~picL~~~~~~-~~~~~~v~GwG~~~~~  137 (235)
T 1ton_A           91 HSNDLMLLHLSEPADITGGVKVIDLPTKEPK-VGSTCLASGWGSTNPS  137 (235)
T ss_dssp             STTCCEEEEESSCCCCCSSCCCCCCCCSCCC-TTCEEEEEESSCSSSS
T ss_pred             CcCCEEEEEcCCccccCCcceeeeCCCCCCC-CCCEEEEEecCCCCCC
Confidence            5689999999999999999999999987543 7999999999998754

>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2

Probab=98.43  E-value=4.4e-07  Score=56.83  Aligned_cols=45  Identities=29%  Similarity=0.611  Sum_probs=40.2

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTR  125 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~  125 (132)
                      ..+|++++++..++.+++.+.++||+..... .|..|.++|||.+.
T Consensus        85 ~~~DIALl~L~~~~~~~~~v~pi~L~~~~~~-~~~~~~v~GwG~~~  129 (225)
T 1npm_A           85 HSHDIMLIRLQNSANLGDKVKPVQLANLCPK-VGQKCIISGWGTVT  129 (225)
T ss_dssp             CTTCCEEEEESSCCCCSSSSCCCEECSSCCC-TTCEEEEEESSCSS
T ss_pred             ccccEEEEeeCCcccCCCceeceECCCCCCC-CCCEEEEEeCCccc
Confidence            5689999999999999999999999986543 79999999999874

>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2

Probab=98.42  E-value=3.1e-07  Score=58.08  Aligned_cols=48  Identities=27%  Similarity=0.667  Sum_probs=41.6

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~  127 (132)
                      ..+|++++++..++.+++.+.++|||.....+ .|..|.++|||.+..+
T Consensus        91 ~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~  139 (242)
T 2qy0_B           91 FEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEK  139 (242)
T ss_dssp             CTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCCCSSS
T ss_pred             CCCcEEEEEECCCCcCCCCcceeecCCCccccCCCCeEEEEeeccCCCc
Confidence            56899999999999999999999999865433 6999999999988754

>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A

Probab=98.42  E-value=5.3e-07  Score=57.26  Aligned_cols=48  Identities=29%  Similarity=0.668  Sum_probs=41.4

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~  127 (132)
                      ..+|++++++..++.+++.+.++|||.....+ .+..|.++|||.+...
T Consensus        99 ~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~  147 (247)
T 1ddj_A           99 TRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGT  147 (247)
T ss_dssp             TSCSCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCCCSSS
T ss_pred             CCCcEEEEEeCCceeeCCCEEeeecCCcccCCCCCCEEEEEEcccCCCC
Confidence            46899999999999999999999999865433 6899999999988643

>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A

Probab=98.41  E-value=5.7e-07  Score=56.85  Aligned_cols=49  Identities=24%  Similarity=0.462  Sum_probs=42.2

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++.+++.+.++||+.....+ .|..|.++|||.+..+.
T Consensus        81 ~~~DiALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~  130 (240)
T 1si5_H           81 EGSDLVLMKLARPAVLDDFVSTIDLPNYGSTIPEKTSCSVYGWGYTGLIN  130 (240)
T ss_dssp             STTCEEEEEESSCCCCSSSCCCCBCCCTTCCCCTTCEEEEEESSCCCCSS
T ss_pred             CCCcEEEEEECCccccCCceeccCcCCcCCCCCCCCEEEEEEeCCCCCCC
Confidence            36899999999999999999999999865433 79999999999987543

>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*

Probab=98.41  E-value=6.3e-07  Score=56.07  Aligned_cols=49  Identities=35%  Similarity=0.511  Sum_probs=41.2

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCC-CCCCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTV-KLVGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~-~~~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++.+++.+.++||+.... ...|..|.++|||.+..++
T Consensus        81 ~~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~g~~~~v~GwG~~~~~~  130 (224)
T 1pq7_A           81 NNNDLAILKLSTSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSEGG  130 (224)
T ss_dssp             TBTCCEEEEESSCCCCBTTBCCCCBCCTTCCCCTTCEEEEEESCCSSTTC
T ss_pred             CCCCEEEEEeCCCCcCCCcccceecCCcccCCCCCCEEEEEecCCcCCCC
Confidence            368999999999999999999999995322 2379999999999987654

>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2

Probab=98.41  E-value=2.9e-07  Score=58.11  Aligned_cols=44  Identities=25%  Similarity=0.516  Sum_probs=39.9

Q ss_pred             cCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccC
Q psy15292         81 SNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTR  125 (132)
Q Consensus        81 ~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~  125 (132)
                      .+|++++++..++.+++.+.++||+..... .|..|.++|||.+.
T Consensus        94 ~~DIALl~L~~~~~~~~~v~picLp~~~~~-~~~~~~v~GwG~~~  137 (237)
T 1gvz_A           94 SHDLMLLRLAQPARITDAVKILDLPTQEPK-LGSTCYTSGWGLIS  137 (237)
T ss_dssp             TTCCEEEEESSCCCCBTTBCCCCCCSSCCC-TTCEEEEEEEECSC
T ss_pred             CCceEEEEeCCCcccCCcEeeeECCCCCCC-CCCEEEEECCCccc
Confidence            799999999999999999999999987544 79999999999874

>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2

Probab=98.40  E-value=2.4e-07  Score=58.55  Aligned_cols=47  Identities=30%  Similarity=0.620  Sum_probs=35.4

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~  127 (132)
                      ..+|++++++..++.+++.+.++||+..... .|..|.++|||.+...
T Consensus        96 ~~~DIALl~L~~~~~~~~~v~picL~~~~~~-~~~~~~v~GwG~~~~~  142 (240)
T 1sgf_A           96 YSNDLMLLRLSKPADITDVVKPITLPTEEPK-LGSTCLASGWGSTTPI  142 (240)
T ss_dssp             CTTCCEEEEESSCCCCCSSCCCCCCCCSCCC-TTCEEEEC-------C
T ss_pred             CCCceEEEEeCCcCcCCCcccccCCCCCCCC-CCCEEEEEecCCCCCC
Confidence            4689999999999999999999999987544 7999999999988653

>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*

Probab=98.40  E-value=3.5e-07  Score=60.56  Aligned_cols=48  Identities=27%  Similarity=0.667  Sum_probs=41.5

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~  127 (132)
                      ..+|+++++|..++.+++.+.+||||.....+ .|..|.|+|||.+..+
T Consensus       180 ~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~  228 (329)
T 1md8_A          180 FEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEK  228 (329)
T ss_dssp             CTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCBCSSS
T ss_pred             CCccEEEEEECCcccCCCceEccccCCCccccCCCCEEEEEeCCCCCCC
Confidence            56899999999999999999999999865433 6899999999988653

>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0

Probab=98.39  E-value=5.1e-07  Score=56.52  Aligned_cols=49  Identities=22%  Similarity=0.503  Sum_probs=42.6

Q ss_pred             ccCCeEEEEeccceeecc-CeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQ-HIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~-~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++.+++ .+.++||+...... .|..|.++|||.+...+
T Consensus        86 ~~~DIALl~L~~~v~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~  136 (228)
T 3h7o_A           86 MENDIAILELSRPLKLDGLKSKPAKLPDIEFRPKTGSDVLVSGYGDGQTMD  136 (228)
T ss_dssp             TBTCCEEEEESSCCCCCSSSSCCCBCCCTTCCCCTTCEEEEEECCCSSCSC
T ss_pred             ccCCEEEEEECCcccccccccccccCCccccCCCCCCeeEEEEEecCCCCC
Confidence            679999999999999998 99999999875323 79999999999987654

>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}

Probab=98.39  E-value=7.4e-07  Score=55.94  Aligned_cols=49  Identities=22%  Similarity=0.398  Sum_probs=42.8

Q ss_pred             ccCCeEEEEeccceeecc-CeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQ-HIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~-~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++.+++ .+.++||+...... .+..|.++|||.+..++
T Consensus        82 ~~~DiAll~L~~~v~~~~~~v~pi~Lp~~~~~~~~~~~~~v~GwG~~~~~~  132 (235)
T 3h7t_A           82 MQNNYAVIETEMPIKLDDKTTKKIELPSLLYDPEPDTSVLVSGWGSTNFKS  132 (235)
T ss_dssp             TBTCCEEEEESSCCCCCSSSCCCCBCCCTTCCCCTTCEEEEEECCCSSTTC
T ss_pred             CCCCeEEEEeccccccCCccccceecCccccCCCCCCeEEEEecCCCCCCC
Confidence            679999999999999998 99999999875323 79999999999987654

>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1

Probab=98.38  E-value=5.7e-07  Score=59.56  Aligned_cols=48  Identities=31%  Similarity=0.761  Sum_probs=41.4

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCC---CCCceEEEEeecccCcC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVK---LVGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~---~~g~~~~v~gwg~~~~~  127 (132)
                      ..+|+++++|..++.+++.+.++|||.....   ..|..|.|+|||.+...
T Consensus       171 ~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~g~~~~v~GWG~t~~~  221 (333)
T 1elv_A          171 FDNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKR  221 (333)
T ss_dssp             CTTCCEEEEESSCCCCBTTBCCCBCCCSSGGGCCCTTCEEEEEESCCCSSC
T ss_pred             CcceEEEEEeCCCCcCCCcccceecCCCcccccccCCcEEEEEECcCcCCC
Confidence            5789999999999999999999999976432   26999999999998754

>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A

Probab=98.38  E-value=6.6e-07  Score=57.94  Aligned_cols=49  Identities=29%  Similarity=0.666  Sum_probs=41.9

Q ss_pred             ccCCeEEEEeccc----eeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKD----VVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~----~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..+    +.+++.+.++||+.....+ .|..|.++|||.+..++
T Consensus       122 ~~~DIALl~L~~~~~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~  175 (283)
T 1yc0_A          122 SDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENV  175 (283)
T ss_dssp             TTTCCEEEEECCBTTBSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTB
T ss_pred             CCCceEEEEeCCCccccccccCceeeeECCCCcCCCCCCCEEEEEEeCccCCCC
Confidence            5789999999998    7889999999999865444 79999999999987653

>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}

Probab=98.38  E-value=6.6e-07  Score=56.44  Aligned_cols=48  Identities=23%  Similarity=0.488  Sum_probs=41.6

Q ss_pred             ccCCeEEEEecccee-eccCeeeeecCCCCCCCCCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVV-FKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~-~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++. +++.+.++||+..... .|..|.++|||.+..++
T Consensus        93 ~~~DIALl~L~~~~~~~~~~v~pi~L~~~~~~-~~~~~~v~GwG~~~~~~  141 (238)
T 1spj_A           93 YSHDLMLLRLTEPADTITDAVKVVELPTEEPE-VGSTCLASGWGSIEPEN  141 (238)
T ss_dssp             CTTCCEEEEESSCCCCSSTTCCCCCCCSSCCC-TTCEEEEEESSCSSSSS
T ss_pred             CCCCeEEEEECccccccCCceeeccCCCCCCC-CCCEEEEEecCCCCCCC
Confidence            568999999999998 8999999999976544 79999999999987654

>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*

Probab=98.38  E-value=2.6e-07  Score=58.83  Aligned_cols=56  Identities=32%  Similarity=0.732  Sum_probs=44.6

Q ss_pred             ccceeee--ccCCeEEEEeccceeeccCeeeeecCCCCC-----CCCCceEEEEeecccCcCC
Q psy15292         73 AIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTV-----KLVGKSATVAGWGRTRHAG  128 (132)
Q Consensus        73 ~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~-----~~~g~~~~v~gwg~~~~~~  128 (132)
                      .|+.|..  ..+|++++++..++.+++.+.++|||....     ...|..|.++|||.+...+
T Consensus        76 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~g~~~~v~GwG~~~~~~  138 (250)
T 1aut_C           76 VHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQETLVTGWGYHSSRE  138 (250)
T ss_dssp             ECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTTTSTTCEEEEEECCCCCSCC
T ss_pred             ECCCCCCCCCCCcEEEEEECCcccCCCceeeeEcCCCccccccccCCCCEEEEEEeCCCCCCC
Confidence            4445544  679999999999999999999999997532     1268999999999887543

>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*

Probab=98.37  E-value=6.9e-07  Score=56.33  Aligned_cols=48  Identities=38%  Similarity=0.771  Sum_probs=41.6

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCC---CCCCceEEEEeecccCcC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTV---KLVGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~---~~~g~~~~v~gwg~~~~~  127 (132)
                      ..+|++++++..++.+++.+.++|||....   ...+..|.++|||.+..+
T Consensus        85 ~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~~GwG~~~~~  135 (242)
T 3tvj_B           85 FDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRG  135 (242)
T ss_dssp             STTCCEEEEESSCCCCBTTBCCCBCCCTTGGGGSCTTCEEEEEESCCCTTS
T ss_pred             CcCcEEEEEECCccccCCCEecCCcCCCcccccccCCCEEEEEEeCCCCCC
Confidence            568999999999999999999999998653   227999999999988753

>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...

Probab=98.36  E-value=2.4e-07  Score=58.57  Aligned_cols=56  Identities=25%  Similarity=0.632  Sum_probs=44.7

Q ss_pred             ccceeee--ccCCeEEEEeccceeeccCeeeeecCCCCC----CCCCceEEEEeecccCcCC
Q psy15292         73 AIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTV----KLVGKSATVAGWGRTRHAG  128 (132)
Q Consensus        73 ~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~----~~~g~~~~v~gwg~~~~~~  128 (132)
                      .|+.|..  ..+|++++++..++.+++.+.++|||....    ...+..|.++|||.+..++
T Consensus        76 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~  137 (241)
T 2jkh_A           76 KHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKG  137 (241)
T ss_dssp             ECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHTTTSSEEEEEESCBSSTTS
T ss_pred             eCCCCCCCCCCCcEEEEEECCcccCCCCEeeeEcCCCCcccccccCCCeEEEEecCCCCCCC
Confidence            3444443  678999999999999999999999997532    2268999999999987654

>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...

Probab=98.34  E-value=2.1e-07  Score=59.32  Aligned_cols=49  Identities=35%  Similarity=0.839  Sum_probs=41.4

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCC---CC-CCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTV---KL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~---~~-~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++.+++.+.++||+....   .+ .+..|.++|||.+..++
T Consensus        87 ~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~  139 (254)
T 2bz6_H           87 TNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRG  139 (254)
T ss_dssp             CSSCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSSTTS
T ss_pred             CcCcEEEEEECCccccCCCccceECCCCccccccccCCCcEEEEeCcccCCCC
Confidence            678999999999999999999999997532   12 58899999999987644

>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...

Probab=98.33  E-value=2.7e-07  Score=59.97  Aligned_cols=55  Identities=38%  Similarity=0.744  Sum_probs=44.3

Q ss_pred             ccceeee---ccCCeEEEEeccceeeccCeeeeecCCCCC----CCCCceEEEEeecccCcC
Q psy15292         73 AIPTYVS---ISNDVALIKIDKDVVFKQHIIPVCLPDQTV----KLVGKSATVAGWGRTRHA  127 (132)
Q Consensus        73 ~~l~~~~---~~~d~c~~~~~~~~~~~~~v~~icl~~~~~----~~~g~~~~v~gwg~~~~~  127 (132)
                      .|+.|..   ..+|++++++..++.+++.+.++|||....    ...|..|.|+|||.+..+
T Consensus       116 ~Hp~y~~~~~~~~DIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~g~~~~v~GWG~~~~~  177 (289)
T 2bdy_A          116 IHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKET  177 (289)
T ss_dssp             ECTTCBTTTTCBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESSCSSCC
T ss_pred             ECCCCCCCCCCCCeEEEEEECCccccCCcccccCCCCccccccccCCCCEEEEECCCcCCCc
Confidence            4555542   578999999999999999999999997532    126899999999998754

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1

Probab=98.31  E-value=6.7e-07  Score=60.58  Aligned_cols=47  Identities=28%  Similarity=0.684  Sum_probs=38.4

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCc
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRH  126 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~  126 (132)
                      ..+|+++++|..++.+++.+.+||||.....+ .|..|.|+|||.+..
T Consensus       248 ~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~  295 (399)
T 1gpz_A          248 FEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEE  295 (399)
T ss_dssp             CTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECC----
T ss_pred             CCCcEEEEEECCcCcCCCceeeeecCCCccccCCCCEEEEEccCCCCC
Confidence            56899999999999999999999999875443 689999999998764

>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A

Probab=98.29  E-value=7.6e-07  Score=55.89  Aligned_cols=55  Identities=36%  Similarity=0.564  Sum_probs=44.0

Q ss_pred             cccceeee--ccCCeEEEEeccceeeccCeeeeecCCCCC---CCCCceEEEEeecccCcC
Q psy15292         72 SAIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTV---KLVGKSATVAGWGRTRHA  127 (132)
Q Consensus        72 ~~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~---~~~g~~~~v~gwg~~~~~  127 (132)
                      ..|+.|..  ..+|++++++. ++.+++.+.++|||....   ...+..|.++|||.+..+
T Consensus        75 ~~hp~y~~~~~~~DiALl~L~-~~~~~~~v~picLp~~~~~~~~~~~~~~~v~GwG~~~~~  134 (230)
T 2hlc_A           75 ISHSMFNPDTYLNDVALIKIP-HVEYTDNIQPIRLPSGEELNNKFENIWATVSGWGQSNTD  134 (230)
T ss_dssp             EECTTCBTTTTBTCCEEEECS-CCCCCSSCCCCBCCCGGGGGCCCTTCEEEEEESSCCSSC
T ss_pred             EECCCCCCCCccccEEEEEec-CCCcCCcEeeeEcCCccccccccCCcEEEEEeeeecCCC
Confidence            34555544  67999999999 899999999999998642   237899999999987654

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=98.28  E-value=3.3e-07  Score=59.39  Aligned_cols=52  Identities=21%  Similarity=0.481  Sum_probs=42.7

Q ss_pred             cccceeee--ccCCeEEEEeccceeeccCeeeeecCCCC----CCCCCceEEEEeecc
Q psy15292         72 SAIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQT----VKLVGKSATVAGWGR  123 (132)
Q Consensus        72 ~~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~----~~~~g~~~~v~gwg~  123 (132)
                      ..|+.|..  ..+|++++++..++.+++.+.++|||...    ....+..|.|+|||.
T Consensus       124 ~~Hp~y~~~~~~nDIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~  181 (283)
T 3f1s_B          124 HVHMRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWAR  181 (283)
T ss_dssp             EECTTCBTTTTBTCCEEEEESSCCCTTTTCCCCBCCCHHHHHHTTTTTSCEEEEECBC
T ss_pred             EECCCCCCCCCCCCEEEEEeCCcccCCCCEEeEECCCCccccccccCCCEEEEEECCC
Confidence            34455544  68999999999999999999999999864    122789999999998

>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A

Probab=98.26  E-value=5.4e-07  Score=64.40  Aligned_cols=56  Identities=25%  Similarity=0.505  Sum_probs=41.6

Q ss_pred             ccceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         73 AIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        73 ~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      .|+.|..  ..+|+++++|..++.+++.+.+||||...... .+..|.|+|||.+..++
T Consensus       468 ~Hp~y~~~~~~nDIALlkL~~pv~~~~~v~PicLp~~~~~~~~~~~~~v~GWG~~~~~~  526 (625)
T 2f83_A          468 IHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRD  526 (625)
T ss_dssp             ECTTCCBTTTBCCCEEEEESSCCCCBTTBCCCBCCCGGGTTCCCCCEEECBCC------
T ss_pred             ECCccCcCCccccEEEEEECCcccCCCceeeeEcCCccCCccCCCEEEEEEecCCCCCC
Confidence            4455544  67899999999999999999999999865433 68899999999887543

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A

Probab=98.26  E-value=1.3e-06  Score=59.27  Aligned_cols=48  Identities=38%  Similarity=0.771  Sum_probs=41.3

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCC---CCCCceEEEEeecccCcC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTV---KLVGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~---~~~g~~~~v~gwg~~~~~  127 (132)
                      ..+|+++++|..++.+++.+.+||||....   ...+..|.|+|||.+..+
T Consensus       246 ~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~v~GWG~~~~~  296 (403)
T 1zjk_A          246 FDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRG  296 (403)
T ss_dssp             CTTCCEEEEESSCCCCBTTBCCCBCCCGGGGGGSSTTCEEEEEESCTTSSS
T ss_pred             CcccEEEEEeCCcCcCCCceecccCCCcccccccCCCCeEEEEcCCcCCCC
Confidence            468999999999999999999999998643   226999999999998764

>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...

Probab=98.25  E-value=2e-06  Score=54.41  Aligned_cols=49  Identities=27%  Similarity=0.449  Sum_probs=41.2

Q ss_pred             ccCCeEEEEeccc----eeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKD----VVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~----~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..+    +.+++.+.++|||...... .|..|.++|||.+..+.
T Consensus        94 ~~~DIALl~L~~~~~~~~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~  147 (247)
T 3mhw_U           94 HHNDIALLKIRSKEGRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTD  147 (247)
T ss_dssp             EESCCEEEEEECTTSCCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTC
T ss_pred             CCCcEEEEEeCCccccccccCCcccccccCCCcCCCCCCCEEEEEecCCcCCCC
Confidence            4589999999988    7889999999999864433 69999999999987654

>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*

Probab=98.22  E-value=9.1e-06  Score=52.34  Aligned_cols=96  Identities=11%  Similarity=0.061  Sum_probs=54.3

Q ss_pred             eeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCc-ccc-----cceeee
Q psy15292          6 TRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSL-SSA-----IPTYVS   79 (132)
Q Consensus         6 v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~-~~~-----~l~~~~   79 (132)
                      +..++.|+     ...+|||||||.+++.                 .+..++++|||.+...... ...     .++.  
T Consensus       101 v~~~i~h~-----~~~nDIALLrL~~~v~-----------------~~~~~~vsGWG~t~~~~~~~~~~~~~~~~l~~--  156 (268)
T 1arb_A          101 SGSTVKAT-----YATSDFTLLELNNAAN-----------------PAFNLFWAGWDRRDQNYPGAIAIHHPNVAEKR--  156 (268)
T ss_dssp             ECEEEEEE-----ETTTTEEEEEESSCCC-----------------GGGCCEEBCEECCSCCCSCEEEEECGGGCSCE--
T ss_pred             ccceEecC-----CCCCceEEEEecCCCC-----------------CCCceEEeCcCccCCCCCcceeeccCCcccEE--
Confidence            56677887     3579999999998741                 2445789999987654321 111     1222  


Q ss_pred             ccCCeEE---EEeccceeeccCee--------eeecCCCCCCC---CCceEEEEeecccCc
Q psy15292         80 ISNDVAL---IKIDKDVVFKQHII--------PVCLPDQTVKL---VGKSATVAGWGRTRH  126 (132)
Q Consensus        80 ~~~d~c~---~~~~~~~~~~~~v~--------~icl~~~~~~~---~g~~~~v~gwg~~~~  126 (132)
                      +....|.   ..+...+ ...+++        ..|-++++.++   .+....|..||...+
T Consensus       157 i~~~~~~~~~~~~~~~~-~~~~iCag~~~~~gdtC~gdsGgPl~~~~~~~~Gi~s~g~~~C  216 (268)
T 1arb_A          157 ISNSTSPTSFVAWGGGA-GTTHLNVQWQPSGGVTEPGSSGSPIYSPEKRVLGQLHGGPSSC  216 (268)
T ss_dssp             EEEECSCCEEECTTSSS-CSSEEEEECCTTSCCCCTTCTTCEEECTTSCEEEEEEECSCCT
T ss_pred             EEeeccccccccccccc-cCCeEEEeeecCCCCCccCcccCCcEeeCCEEEEEEeecCccc
Confidence            2222222   1111100 011111        36778888776   356889999996434

>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*

Probab=98.16  E-value=8.8e-07  Score=55.77  Aligned_cols=49  Identities=33%  Similarity=0.727  Sum_probs=41.0

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCC--C-CCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVK--L-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~--~-~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++.+++.+.++||+.....  + .+..|.++|||.+...+
T Consensus        86 ~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~~~v~GwG~~~~~~  137 (235)
T 2wph_S           86 YNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKG  137 (235)
T ss_dssp             CTTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHHHTCEEEEEESSBSSTTS
T ss_pred             CCCCEEEEEECCcCcCCCCccccCCCCCcccccccCCccEEEEeCCCccCCC
Confidence            5689999999999999999999999975321  2 58899999999987654

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.15  E-value=1.4e-06  Score=57.32  Aligned_cols=51  Identities=22%  Similarity=0.492  Sum_probs=42.0

Q ss_pred             ccceeee--ccCCeEEEEeccceeeccCeeeeecCCCC----CCCCCceEEEEeecc
Q psy15292         73 AIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQT----VKLVGKSATVAGWGR  123 (132)
Q Consensus        73 ~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~----~~~~g~~~~v~gwg~  123 (132)
                      .|+.|..  ..+|++++++..++.+++.+.++|||...    ....+..|.++|||.
T Consensus       166 ~Hp~y~~~~~~~DIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~  222 (317)
T 3h5c_B          166 VHMRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWAR  222 (317)
T ss_dssp             ECTTCBTTTTBSCCEEEEESSCCCTTTSCCCCBCCCHHHHHHTTTTTSCEEEEBCCT
T ss_pred             ECCCCCCCCCCCCeEEEEeCCcccCCCCccceeCCCcccccccccCCCeEEEEecCC
Confidence            4444543  67999999999999999999999999864    222799999999998

>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}

Probab=98.10  E-value=2e-06  Score=60.86  Aligned_cols=56  Identities=32%  Similarity=0.563  Sum_probs=38.4

Q ss_pred             cccceeee--ccCCeEEEEeccceeecc----CeeeeecCCCCCCC-CCceEEEEeecccCcC
Q psy15292         72 SAIPTYVS--ISNDVALIKIDKDVVFKQ----HIIPVCLPDQTVKL-VGKSATVAGWGRTRHA  127 (132)
Q Consensus        72 ~~~l~~~~--~~~d~c~~~~~~~~~~~~----~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~  127 (132)
                      ..|+.|..  ..+|+++++|..++.+++    .+.++|||.....+ .|..|.|+|||.+..+
T Consensus       398 i~Hp~Y~~~~~~nDIALlkL~~~v~~~~~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~  460 (565)
T 2xrc_A          398 IFHENYNAGTYQNDIALIEMKKDGNKKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDN  460 (565)
T ss_dssp             EECTTCCTTTCTTCCEEEEECCCSSSSCSCCTTCCCCBCCSCTTSSCTTCEEEEEC-------
T ss_pred             EeCCCCCCCcccccceeeeeccccccccccccceeeeecCCcccccCCCCEEEEEeCccCCCC
Confidence            34555544  779999999999987653    67899999765444 7999999999998754

>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...

Probab=98.07  E-value=2.6e-06  Score=54.18  Aligned_cols=55  Identities=38%  Similarity=0.754  Sum_probs=43.7

Q ss_pred             ccceeee---ccCCeEEEEeccceeeccCeeeeecCCCCCC----CCCceEEEEeecccCcC
Q psy15292         73 AIPTYVS---ISNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGWGRTRHA  127 (132)
Q Consensus        73 ~~l~~~~---~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~----~~g~~~~v~gwg~~~~~  127 (132)
                      .|+.|..   ..+|++++++..++.+++.+.++|||.....    ..|..|.++|||.+...
T Consensus        86 ~hp~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~g~~~~v~GwG~~~~~  147 (259)
T 3rm2_H           86 IHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKET  147 (259)
T ss_dssp             ECTTCBTTTTCBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESCCSSCC
T ss_pred             ECCCCCCCCCCCCcEEEEEeCCceEcCCCcccccCCCccccccccCCCCEEEEeecCCCcCc
Confidence            4444541   6789999999999999999999999985321    26999999999987653

>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A

Probab=98.00  E-value=8.7e-06  Score=59.64  Aligned_cols=48  Identities=29%  Similarity=0.668  Sum_probs=40.2

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~  127 (132)
                      ..+|+++++|..++.+++.+.+||||.....+ .+..|.|+|||.+...
T Consensus       643 ~~nDIALLkL~~pv~~s~~V~PIcLP~~~~~~~~g~~~~vsGWG~t~~~  691 (791)
T 4dur_A          643 TRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGT  691 (791)
T ss_dssp             TCCSCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCCC---
T ss_pred             CCCceEEEEecCccccCCceeeeeccCcccccCCCCEEEEEEeCCCCCC
Confidence            46899999999999999999999999875444 7999999999988643

>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}

Probab=97.99  E-value=1e-06  Score=60.30  Aligned_cols=53  Identities=42%  Similarity=0.811  Sum_probs=42.7

Q ss_pred             ccceeee---ccCCeEEEEeccceeeccCeeeeecCCCCCC---C-CCceEEEEeecccC
Q psy15292         73 AIPTYVS---ISNDVALIKIDKDVVFKQHIIPVCLPDQTVK---L-VGKSATVAGWGRTR  125 (132)
Q Consensus        73 ~~l~~~~---~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~---~-~g~~~~v~gwg~~~  125 (132)
                      .|..|..   ..+|+++++|..++.+++.+.+||||.....   + .|..|.|+|||.+.
T Consensus       251 ~Hp~y~~~~~~~nDIALLkL~~pv~~s~~v~PicLp~~~~~~~~~~~g~~~~v~GWG~t~  310 (424)
T 3nxp_A          251 IHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLK  310 (424)
T ss_dssp             ECTTCBTTTTSBTCCEEEEESSCCCCCSSCCCCBCCCHHHHHHHHHHCSEEEEEESSHHH
T ss_pred             eCCCCCCCCCCcCCeEEEEecCccccCCcccccCCCCcccccccccCCCeEEEEecCCCC
Confidence            4455542   6789999999999999999999999985421   2 68999999999864

>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}

Probab=97.81  E-value=3.6e-05  Score=49.46  Aligned_cols=57  Identities=26%  Similarity=0.451  Sum_probs=43.7

Q ss_pred             ccceeee----ccCCeEEEEeccce----eeccCeeeeecCCCCCCC-CCceEEEEeecccCcCCC
Q psy15292         73 AIPTYVS----ISNDVALIKIDKDV----VFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        73 ~~l~~~~----~~~d~c~~~~~~~~----~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~~  129 (132)
                      .|+.|..    .++|++++++...+    .++..+.++||+...... .|..|.+.|||.+...+.
T Consensus       106 ~Hp~y~~~~~~~~~Diall~L~~~~~~~~~~~~~v~picL~~~~~~~~~~~~~~~~g~G~~~~~~~  171 (276)
T 2vnt_A          106 LHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDY  171 (276)
T ss_dssp             ECTTCEECSSCEESCCEEEEEECTTSCCCCCCSSCCCCBCCCSSCCCCTTCEEEEEESCCSSTTCS
T ss_pred             EccccccccccccchhhhhhhhccccccccCcccccccccccccccccccceEEEEEeeccccCCC
Confidence            4455543    46899999997654    578899999999875544 799999999998876544

>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A

Probab=97.75  E-value=0.00032  Score=44.21  Aligned_cols=92  Identities=14%  Similarity=0.079  Sum_probs=52.3

Q ss_pred             CCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcc---cccceeee---ccCC--eEEEEeccc
Q psy15292         21 RNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLS---SAIPTYVS---ISND--VALIKIDKD   92 (132)
Q Consensus        21 ~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~---~~~l~~~~---~~~d--~c~~~~~~~   92 (132)
                      .+|||||+|.     +..+.+++|+... ...|+.+++.||+.........   ....+...   ..++  .+...+.  
T Consensus       102 ~~DiAll~l~-----~~~~~~~~l~~~~-~~~G~~v~v~G~p~g~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~--  173 (237)
T 3k6y_A          102 SVDVAILAVP-----HLPPPPLVFAAEP-AKTGADVVVLGYPGGGNFTATPARIREAIRLSGPDIYGDPEPVTRDVYT--  173 (237)
T ss_dssp             TTTEEEEECT-----TCCSCCCCBCSSC-CCTTCEEEEEECGGGCSCEEEEEEEEEEEEEEECCTTCCSSCEEEEEEE--
T ss_pred             CCCEEEEEeC-----CCCCCceecCCCC-CCCCCEEEEEECCCCCCCccceeEEEeeEeecccccccCCCcccccEEE--
Confidence            5799999998     3457888888333 2378999999997532211100   11111111   1111  2211111  


Q ss_pred             eeeccCeeeeecCCCCCCC---CCceEEEEeecccC
Q psy15292         93 VVFKQHIIPVCLPDQTVKL---VGKSATVAGWGRTR  125 (132)
Q Consensus        93 ~~~~~~v~~icl~~~~~~~---~g~~~~v~gwg~~~  125 (132)
                        .   -..+|-++++.++   .|....|..|+...
T Consensus       174 --~---~~~~~~GdSGGPLv~~~G~vvGI~s~~~~~  204 (237)
T 3k6y_A          174 --I---RADVEQGDSGGPLIDLNGQVLGVVFGAAID  204 (237)
T ss_dssp             --E---ESCCCTTCTTCEEECTTSCEEEEEEEECSS
T ss_pred             --e---cCccCCCccHHHEECCCCEEEEEEEeeccC
Confidence              1   1246778888776   58888888887643

>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1

Probab=97.57  E-value=0.0003  Score=44.54  Aligned_cols=96  Identities=15%  Similarity=0.019  Sum_probs=55.3

Q ss_pred             CCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeeeccCCeEEEEeccc-eeeccC
Q psy15292         20 FRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVSISNDVALIKIDKD-VVFKQH   98 (132)
Q Consensus        20 ~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~~~~d~c~~~~~~~-~~~~~~   98 (132)
                      ..+|||||++..+.   ..+.+++|+.......|+.+.+.||+.......    ....  ++...|....... ..+.+.
T Consensus       101 ~~~DlAllkl~~~~---~~~~~~~l~~s~~~~~G~~v~~iG~p~g~~~~v----t~Gi--vs~~~r~~~~~~~~~~~~~~  171 (239)
T 1l1j_A          101 EELDIAVIKIKASD---KKFPYLEFGDSDKVKIGEWAIAIGNPLGFQHTV----TVGV--VSATNRRIPKPDGSGYYVGL  171 (239)
T ss_dssp             TTTTEEEEEBCCSS---SCCCCCEECCGGGCCTTCEEEEEECTTSSSCEE----EEEE--EEEEEEEEECTTSSCEEEEE
T ss_pred             CCCCEEEEEEcCCC---CCCceEEecCccCCccccEEEEEECCCCCCCcE----EEEE--EeccccccccCCCccccCCE
Confidence            47899999999765   457788887643333799999999975322100    0000  1111111111100 001111


Q ss_pred             e---eeeecCCCCCCC---CCceEEEEeeccc
Q psy15292         99 I---IPVCLPDQTVKL---VGKSATVAGWGRT  124 (132)
Q Consensus        99 v---~~icl~~~~~~~---~g~~~~v~gwg~~  124 (132)
                      +   ..+|-++++.++   .|....|..|+..
T Consensus       172 i~tda~i~~G~SGGPLv~~~G~vvGI~s~~~~  203 (239)
T 1l1j_A          172 IQTDAAINPGNSGGPLLNIHGEVIGINTAIVN  203 (239)
T ss_dssp             EEESSCCCTTTTTSEEECSSSEEEEEECCCSC
T ss_pred             EEECCCCCCCCccHHhccCCCeEEEEEeeeec
Confidence            1   357888888777   5888899999864

>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A

Probab=97.57  E-value=3.2e-05  Score=47.96  Aligned_cols=43  Identities=19%  Similarity=0.277  Sum_probs=36.4

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTR  125 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~  125 (132)
                      ..+|++++++..+  +++.+.++||+..... .|..|.++|||.+.
T Consensus        94 ~~~DiAll~L~~~--~~~~v~pi~l~~~~~~-~g~~~~~~Gwg~~~  136 (215)
T 1p3c_A           94 SQYDFAVIKTDTN--IGNTVGYRSIRQVTNL-TGTTIKISGYPGDK  136 (215)
T ss_dssp             GGGCCEEEEESSC--HHHHHCCCCBCCCSCC-TTCEEEEEECCHHH
T ss_pred             cccCEEEEEECCC--CcccceeeecCCCccc-CCCeEEEecCCCCC
Confidence            6789999999985  6788999999987543 79999999999754

>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A

Probab=97.52  E-value=0.00017  Score=44.89  Aligned_cols=51  Identities=29%  Similarity=0.467  Sum_probs=37.0

Q ss_pred             ccceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCC
Q psy15292         73 AIPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG  128 (132)
Q Consensus        73 ~~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~  128 (132)
                      .|+.|..  ..+|++++++..++.+    .++|++..... .+..|.++|||.+..++
T Consensus        72 ~hp~y~~~~~~~DIALl~L~~~v~~----~~i~l~~~~~~-~~~~~~v~GwG~~~~~~  124 (224)
T 3beu_A           72 QAPGFTKETYGKDWALIKLAQPINQ----PTLKIATTTAY-NQGTFTVAGWGANREGG  124 (224)
T ss_dssp             ECTTCCCGGGSCCCEEEEESSCCCS----CCCEECCSSTT-SSSEEEEEESSCSSTTC
T ss_pred             eCCCcCCCcCCCCEEEEEeCCCCCC----Ccccccccccc-CCCEEEEEecCccCCCC
Confidence            3444543  6789999999998854    46777765333 56699999999987654

>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A

Probab=97.37  E-value=0.00039  Score=43.73  Aligned_cols=93  Identities=16%  Similarity=0.126  Sum_probs=49.7

Q ss_pred             CCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee-ccCCeEEEEecc---ceeec
Q psy15292         21 RNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS-ISNDVALIKIDK---DVVFK   96 (132)
Q Consensus        21 ~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~-~~~d~c~~~~~~---~~~~~   96 (132)
                      .+|||||++..+.    .+.+++|+.......|+.+++.||+......    .....+. .....+...+..   .....
T Consensus       109 ~~DlAlL~l~~~~----~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~----~~~g~vs~~~~~~~~~~~~~~~~~~i~~  180 (231)
T 3tjo_A          109 KADIALIKIDHQG----KLPVLLLGRSSELRPGEFVVAIGSPFSLQNT----VTTGIVSTTQRGGKELGLRNSDMDYIQT  180 (231)
T ss_dssp             TTTEEEEECCCSS----CCCCCCBCCGGGCCTTCEEEEEEEEETTEEE----EEEEEEEECC-------------CCEEE
T ss_pred             CCCEEEEEecCCC----CCCceecCCcCCCCCCCEEEEEECCCCCCCc----eeeEEEeeccccccccccCCCcccEEEE
Confidence            5899999998753    3566677554433478999999997532110    0011111 111111100000   01111


Q ss_pred             cCeeeeecCCCCCCC---CCceEEEEeecc
Q psy15292         97 QHIIPVCLPDQTVKL---VGKSATVAGWGR  123 (132)
Q Consensus        97 ~~v~~icl~~~~~~~---~g~~~~v~gwg~  123 (132)
                      +  ..+|-++++.++   .|....|..|+.
T Consensus       181 d--a~i~~G~SGGPLv~~~G~vVGI~s~~~  208 (231)
T 3tjo_A          181 D--AIINYGNAGGPLVNLDGEVIGINTLKV  208 (231)
T ss_dssp             S--SCCCTTTTTSEEECTTSCEEEEEEEEE
T ss_pred             c--CCcCCCCchhHeecCCCeEEEEEeEEe
Confidence            1  246668888776   588999999975

>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}

Probab=97.33  E-value=0.00037  Score=46.47  Aligned_cols=98  Identities=16%  Similarity=0.125  Sum_probs=55.5

Q ss_pred             CCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--c-cCCeEEEEeccceeecc
Q psy15292         21 RNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--I-SNDVALIKIDKDVVFKQ   97 (132)
Q Consensus        21 ~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--~-~~d~c~~~~~~~~~~~~   97 (132)
                      .+|||||++..+   ...+.+++|+.......|+.+++.||+........ ........  + ....|.. +...+ ..+
T Consensus        99 ~~DlAlLkl~~~---~~~~~~i~l~~s~~~~~G~~v~~iG~p~g~~~~~~-~g~vs~~~~~~~~~~~~~~-~~~~i-~~d  172 (348)
T 3qo6_A           99 DKDVAVLRIDAP---KNKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLT-TGVISGLRREISSAATGRP-IQDVI-QTD  172 (348)
T ss_dssp             GGTEEEEECCCC---GGGCCCCCBCCSTTCCTTCEEEEEECGGGCTTEEE-EEEEEEEEEEECCSSSSSC-EEEEE-EEC
T ss_pred             cCCEEEEEEcCC---CCCceeEEecCcccCCCCCEEEEEECCCCCCCcEe-EEEEEeeccccccccCCCc-ccCEE-EEe
Confidence            579999999876   24577888876544447999999999754322110 11111111  1 1111100 00001 111


Q ss_pred             CeeeeecCCCCCCC---CCceEEEEeecccCc
Q psy15292         98 HIIPVCLPDQTVKL---VGKSATVAGWGRTRH  126 (132)
Q Consensus        98 ~v~~icl~~~~~~~---~g~~~~v~gwg~~~~  126 (132)
                        ..+|-++++.++   .|....|..|+....
T Consensus       173 --a~i~~G~SGGPLvn~~G~vvGI~s~~~~~~  202 (348)
T 3qo6_A          173 --AAINPGNSGGPLLDSSGTLIGINTAIYSPS  202 (348)
T ss_dssp             --SCCCTTCTTCEEECTTSCEEEEEEEEECSS
T ss_pred             --CCcCCCCcHHHhhCCCCeEEEEEEeeecCC
Confidence              356778888776   588999999986543

>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}

Probab=97.24  E-value=0.0002  Score=44.65  Aligned_cols=44  Identities=11%  Similarity=0.175  Sum_probs=36.7

Q ss_pred             ccCCeEEEEeccc--eeeccCee-eeecCCCCCCCCCceEEEEeecccC
Q psy15292         80 ISNDVALIKIDKD--VVFKQHII-PVCLPDQTVKLVGKSATVAGWGRTR  125 (132)
Q Consensus        80 ~~~d~c~~~~~~~--~~~~~~v~-~icl~~~~~~~~g~~~~v~gwg~~~  125 (132)
                      ..+|++++++..+  +.+++.+. +++++... . .|..|.++|||.+.
T Consensus        88 ~~~DiAll~L~~~~~~~~~~~v~~~~~l~~~~-~-~g~~~~v~GwG~~~  134 (218)
T 3cp7_A           88 FEHDYAFAVLETKGGTTVQQQVGTASPIAFNQ-P-RGQYYSAYGYPAAA  134 (218)
T ss_dssp             GGGCCEEEEECCBTTBCHHHHHSCCBCBCCSC-C-SSCEEEEEECCCST
T ss_pred             CcCCEEEEEEeCCCCcChhHhcCcccceeecC-C-CCCEEEEEeCCCCC
Confidence            6789999999998  77888887 88887642 3 68999999999875

>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A

Probab=97.24  E-value=0.0018  Score=42.88  Aligned_cols=94  Identities=17%  Similarity=0.135  Sum_probs=47.6

Q ss_pred             CCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee-ccCCeEEEEecc---ceeec
Q psy15292         21 RNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS-ISNDVALIKIDK---DVVFK   96 (132)
Q Consensus        21 ~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~-~~~d~c~~~~~~---~~~~~   96 (132)
                      .+|||||++..+    ..+.+++++.......|+.+.+.||+........    ...+. .....+...+..   .....
T Consensus        92 ~~DlAlL~l~~~----~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~----~g~vs~~~~~~~~~~~~~~~~~~i~~  163 (332)
T 3num_A           92 KADIALIKIDHQ----GKLPVLLLGRSSELRPGEFVVAIGSPFSLQNTVT----TGIVSTTQRGGKELGLRNSDMDYIQT  163 (332)
T ss_dssp             TTTEEEEEECCS----SCCCCCCBCCTTSCCTTCEEEEECC-----CCEE----EEEEEEC--------------CCEEE
T ss_pred             CCCeEEEEEcCC----CCCceeeecCcccCCCCCEEEEEECCCCCCccee----eeEEEeecccccccCcCCCcCCEEEE
Confidence            479999999976    2355667765444347899999999753321110    11111 111111111100   01111


Q ss_pred             cCeeeeecCCCCCCC---CCceEEEEeeccc
Q psy15292         97 QHIIPVCLPDQTVKL---VGKSATVAGWGRT  124 (132)
Q Consensus        97 ~~v~~icl~~~~~~~---~g~~~~v~gwg~~  124 (132)
                      +  ..++-++++.++   .|....|..|+..
T Consensus       164 d--~~i~~G~SGGPlv~~~G~vvGI~s~~~~  192 (332)
T 3num_A          164 D--AIINYGNAGGPLVNLDGEVIGINTLKVT  192 (332)
T ss_dssp             S--SCCCTTTTTSEEEETTSCEEEEEEEEEE
T ss_pred             E--CCcCCCCcHHHhhCCCCcEEEEEeeEec
Confidence            1  235667887766   5889999998753

>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A

Probab=97.22  E-value=0.00026  Score=44.68  Aligned_cols=46  Identities=20%  Similarity=0.269  Sum_probs=36.7

Q ss_pred             cCCeEEEEecccee---eccCeeeeecCCCCCCCCCceEEEEeecccCc
Q psy15292         81 SNDVALIKIDKDVV---FKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH  126 (132)
Q Consensus        81 ~~d~c~~~~~~~~~---~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~  126 (132)
                      .+|++++++..++.   +++.+.++||+.......|+.|.+.|||....
T Consensus       118 ~~DiAll~l~~~~~~~~~~~~v~~i~L~~~~~~~~g~~~~v~Gwg~~~~  166 (242)
T 1agj_A          118 GVDLALIRLKPDQNGVSLGDKISPAKIGTSNDLKDGDKLELIGYPFDHK  166 (242)
T ss_dssp             TSCCEEEEECCCTTSCCHHHHSCCCEECCSTTCCTTCEEEEEECCTTTS
T ss_pred             CCcEEEEEEcCCCccccccccccceecCccccCCCCCEEEEEeCCCCCC
Confidence            68999999998753   56778999998753333799999999997654

>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A

Probab=97.15  E-value=0.00032  Score=42.34  Aligned_cols=95  Identities=12%  Similarity=0.041  Sum_probs=55.3

Q ss_pred             CCceEEEEeCCCeeeCCCeeee----eecCC-CCcccCCcEEEeccCccccCCCcccccceeee--ccCCeEEEEeccce
Q psy15292         21 RNDVALIKIDKDVVFKQHIIPV----CLPDQ-TVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--ISNDVALIKIDKDV   93 (132)
Q Consensus        21 ~~diall~l~~~~~~~~~~~~~----cl~~~-~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--~~~d~c~~~~~~~~   93 (132)
                      .+|||||||..++.++..++++    +++.. .....|+.+.+.||......+     .++.+.  +..+.+.. +...+
T Consensus        53 ~~DiAlikl~~~~~~~~~v~~i~~~~~~~~~~~~~~~G~~v~~~G~~~~~t~G-----~v~~~~~~v~~~~~~~-~~~~i  126 (181)
T 2sga_A           53 NNDYGIIRHSNPAAADGRVYLYNGSYQDITTAGNAFVGQAVQRSGSTTGLRSG-----SVTGLNATVNYGSSGI-VYGMI  126 (181)
T ss_dssp             BSCEEEEEESCGGGCCCEEECSSSCEEECCEECCCCTTCEEEEEETTTEEEEE-----EEEEEEEEEECGGGCE-EEEEE
T ss_pred             CCCEEEEEccCCCcccceEEecCCcceeecccccCCCCCEEEEeecCCCccEE-----EEEEeEEEEECCCCCE-EeeeE
Confidence            5899999999988887788887    66542 222378888888886432111     122222  21111110 11111


Q ss_pred             eeccCeeeeecCCCCCCC--CCceEEEEeeccc
Q psy15292         94 VFKQHIIPVCLPDQTVKL--VGKSATVAGWGRT  124 (132)
Q Consensus        94 ~~~~~v~~icl~~~~~~~--~g~~~~v~gwg~~  124 (132)
                       ..+  ..+|-++++.++  .+....|..||..
T Consensus       127 -~~~--~c~~~GDSGGPlv~~~~~vGI~s~g~~  156 (181)
T 2sga_A          127 -QTN--VCAQPGDSGGSLFAGSTALGLTSGGSG  156 (181)
T ss_dssp             -EES--CCCCTTCTTCEEEETTEEEEEEEEEEE
T ss_pred             -ecc--cccCCCCCCCEEEECCEEEEEEEeeCC
Confidence             111  234567888877  5778889999863

>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A

Probab=97.13  E-value=0.0011  Score=43.69  Aligned_cols=39  Identities=18%  Similarity=0.306  Sum_probs=30.4

Q ss_pred             CCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccC
Q psy15292         20 FRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWG   62 (132)
Q Consensus        20 ~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG   62 (132)
                      ..+|||||++..+    ..+.+++|+.......|+.+.+.||.
T Consensus        85 ~~~DlAllkl~~~----~~~~~~~l~~~~~~~~G~~v~~~G~p  123 (324)
T 1y8t_A           85 PTSDIAVVRVQGV----SGLTPISLGSSSDLRVGQPVLAIGSP  123 (324)
T ss_dssp             TTTTEEEEEECSC----CSCCCCEECCSTTCCTTCEEEEEECG
T ss_pred             CCCCEEEEEECCC----CCCceEEecCcccCCCCCEEEEEEcC
Confidence            4789999999976    45678888764433478999999994

>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A

Probab=97.12  E-value=0.0022  Score=40.43  Aligned_cols=95  Identities=11%  Similarity=0.067  Sum_probs=51.6

Q ss_pred             CCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee-ccCCeEEEEeccceeeccCe
Q psy15292         21 RNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS-ISNDVALIKIDKDVVFKQHI   99 (132)
Q Consensus        21 ~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~-~~~d~c~~~~~~~~~~~~~v   99 (132)
                      .+|||||++..+.    .+.+++|+.......|+.+++.||+......    .....+. .....+.......+...+  
T Consensus        99 ~~DlAll~l~~~~----~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~~----~~~g~vs~~~~~~~~~~~~~~~i~~d--  168 (237)
T 3lgi_A           99 LTDLAVLKINATG----GLPTIPINARRVPHIGDVVLAIGNPYNLGQT----ITQGIISATGRIGLNPTGRQNFLQTD--  168 (237)
T ss_dssp             TTTEEEEECCCSS----CCCCCCCCTTCCCCTTBEEEEEECGGGSCSE----EEEEEEEEECCSSCCTTSCSCCEEEC--
T ss_pred             CCCEEEEEecCCC----CCceEeccCcccCCCCCEEEEEECCCCCCCc----EEEEEEEecccccccCCCcCCEEEEc--
Confidence            4799999998764    3456677654333478999999997532211    0111111 111110000000011111  


Q ss_pred             eeeecCCCCCCC---CCceEEEEeecccC
Q psy15292        100 IPVCLPDQTVKL---VGKSATVAGWGRTR  125 (132)
Q Consensus       100 ~~icl~~~~~~~---~g~~~~v~gwg~~~  125 (132)
                      ..+|-++++.++   .|....|..|+...
T Consensus       169 ~~i~~G~SGGPlv~~~G~vvGI~s~~~~~  197 (237)
T 3lgi_A          169 ASINHGNSGGALVNSLGELMGINTLSFDK  197 (237)
T ss_dssp             SCCCTTCTTCEEECTTCCEEEEECCCCCC
T ss_pred             CccCCCCchHHeeCCCCeEEEEEeeeecc
Confidence            246778887776   58899999997554

>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1

Probab=97.03  E-value=0.0017  Score=42.87  Aligned_cols=92  Identities=12%  Similarity=0.047  Sum_probs=53.5

Q ss_pred             CCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeeeccCCeEEEE-e-----ccce
Q psy15292         20 FRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVSISNDVALIK-I-----DKDV   93 (132)
Q Consensus        20 ~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~~~~d~c~~~-~-----~~~~   93 (132)
                      ..+|||||++..+.    .+.+++|+.......|+.+.+.||+.......      ..-.+....|... +     ...+
T Consensus        92 ~~~DlAllkl~~~~----~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~~v------~~G~vs~~~~~~~~~g~~~~~~~~  161 (325)
T 1lcy_A           92 PVADIATLRIQTKE----PLPTLPLGRSADVRQGEFVVAMGSPFALQNTI------TSGIVSSAQRPARDLGLPQTNVEY  161 (325)
T ss_dssp             TTTTEEEEECCCSS----CCCCCCBCCGGGCCTTCEEEECCCTTSSSSCC------EEEEBCSCSCC---------CCCC
T ss_pred             CCCCEEEEEEcCCC----CCceEEecccccCCCCCEEEEEECCCCCCCcE------EeEEEecccccccccCCCCCCCCE
Confidence            36899999998753    45677776543333789999999986432110      0101232223110 1     0111


Q ss_pred             eeccCeeeeecCCCCCCC---CCceEEEEeecc
Q psy15292         94 VFKQHIIPVCLPDQTVKL---VGKSATVAGWGR  123 (132)
Q Consensus        94 ~~~~~v~~icl~~~~~~~---~g~~~~v~gwg~  123 (132)
                      ...+  ..+|-++++.++   .|....|..|+.
T Consensus       162 i~~d--~~~~~G~SGGPl~~~~G~vVGI~s~~~  192 (325)
T 1lcy_A          162 IQTD--AAIDFGNAGGPLVNLDGEVIGVNTMKV  192 (325)
T ss_dssp             EEES--SCCSTTTTTSEEEETTSCEEEEEEEEE
T ss_pred             EEEc--CCCCCCCccccEECCCCEEEEEEeEee
Confidence            1111  246778888776   688999998875

>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*

Probab=97.02  E-value=5.5e-05  Score=52.73  Aligned_cols=47  Identities=23%  Similarity=0.404  Sum_probs=39.2

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCC------CCCCceEEEEeecccCc
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTV------KLVGKSATVAGWGRTRH  126 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~------~~~g~~~~v~gwg~~~~  126 (132)
                      ..+|++++++..++.+++.+.++|||....      ...|..|.+.|||.+..
T Consensus       315 ~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~g~~~~~~g~g~~~~  367 (509)
T 2odp_A          315 YGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNK  367 (509)
T ss_dssp             CTTCCEEEEESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCS
T ss_pred             cCCCeEEEEECCcccCCCCcccccCCCCcccchhhccCCCCcccccccccccc
Confidence            468999999999999999999999997532      12688999999997654

>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A

Probab=96.98  E-value=0.0011  Score=42.66  Aligned_cols=46  Identities=15%  Similarity=0.318  Sum_probs=37.2

Q ss_pred             ccCCeEEEEeccce---eeccCeeeeecCCCCCCCCCceEEEEeecccC
Q psy15292         80 ISNDVALIKIDKDV---VFKQHIIPVCLPDQTVKLVGKSATVAGWGRTR  125 (132)
Q Consensus        80 ~~~d~c~~~~~~~~---~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~  125 (132)
                      ..+|++++++..++   .++..+.++||+.......|+.|.+.|||...
T Consensus        90 ~~~DIALLkL~~~~~~~~~~~~v~pi~L~~~~~~~~g~~v~v~Gwg~~~  138 (274)
T 2o8l_A           90 GEGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQTNQNITVTGYPGDK  138 (274)
T ss_dssp             SSSCCEEEEECCCTTSCCTTTSSCCCEECCCTTCCTTCEEEEEECCTTS
T ss_pred             CCCcEEEEEecCcccccccccccccccccccccccCCCEEEEEECCCCC
Confidence            56899999999875   46788999999875433379999999999754

>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...

Probab=96.93  E-value=0.00073  Score=40.89  Aligned_cols=44  Identities=14%  Similarity=0.123  Sum_probs=35.5

Q ss_pred             ccCCeEEEEecc-ceeeccCeeeeecCCCCCCCCCceEEEEeecc
Q psy15292         80 ISNDVALIKIDK-DVVFKQHIIPVCLPDQTVKLVGKSATVAGWGR  123 (132)
Q Consensus        80 ~~~d~c~~~~~~-~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~  123 (132)
                      ..+|++++++.. ++.+++.+.+++++.......|+.|.++||+.
T Consensus        60 ~~~DiAll~l~~~~~~~~~~v~~~~l~~~~~~~~g~~v~~~Gw~~  104 (185)
T 2qa9_E           60 PNNDYGIVRYTNTTIPKDGTVGGQDITSAANATVGMAVTRRGSTT  104 (185)
T ss_dssp             SBSCEEEEEECCSSSCCCCEETTEECCEECCCCTTCEEEEEETTT
T ss_pred             CCCCEEEEEecCCCccccCccceeeeCCcccCCCCCEEEEecCCC
Confidence            468999999998 78888888888887543333799999999974

>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1

Probab=96.89  E-value=0.00083  Score=43.17  Aligned_cols=46  Identities=17%  Similarity=0.343  Sum_probs=37.0

Q ss_pred             ccCCeEEEEeccce---eeccCeeeeecCCCCCCCCCceEEEEeecccC
Q psy15292         80 ISNDVALIKIDKDV---VFKQHIIPVCLPDQTVKLVGKSATVAGWGRTR  125 (132)
Q Consensus        80 ~~~d~c~~~~~~~~---~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~  125 (132)
                      ..+|++++++..++   .++..+.++||+.......|..|.+.|||...
T Consensus        90 ~~~DIALLkL~~~~~~~~~~~~v~pi~L~~~~~~~~g~~v~v~Gwg~~~  138 (268)
T 1wcz_A           90 GEGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQVNQNITVTGYPGDK  138 (268)
T ss_dssp             SSSCCEEEEECCCTTSCCHHHHSCCCCBCCCSSCCTTCEEEEEECCTTS
T ss_pred             CCCcEEEEEecCcccccccccccceeecccccccCCCCEEEEEECCCCC
Confidence            56899999999876   46777899999875433379999999999654

>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A

Probab=96.86  E-value=9.4e-05  Score=51.35  Aligned_cols=46  Identities=28%  Similarity=0.390  Sum_probs=38.5

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCC-----CC-CCceEEEEeecccC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTV-----KL-VGKSATVAGWGRTR  125 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~-----~~-~g~~~~v~gwg~~~  125 (132)
                      ..+|++++++..++.+++.+.|+|||....     .+ .|..|.+.|||.+.
T Consensus       306 ~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~~~~~g~g~~~  357 (497)
T 1rrk_A          306 YDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLP  357 (497)
T ss_dssp             CTTCCEEEEESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSC
T ss_pred             CCCcEEEEEECCCCcCCCCeeeeeCCCCCccccccccCCCCchhcccccccC
Confidence            468999999999999999999999997531     12 68899999999764

>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A

Probab=96.74  E-value=0.0011  Score=42.07  Aligned_cols=44  Identities=23%  Similarity=0.339  Sum_probs=35.4

Q ss_pred             cCCeEEEEeccce---eeccCeeeeecCCCCCCCCCceEEEEeeccc
Q psy15292         81 SNDVALIKIDKDV---VFKQHIIPVCLPDQTVKLVGKSATVAGWGRT  124 (132)
Q Consensus        81 ~~d~c~~~~~~~~---~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~  124 (132)
                      .+|++++++..+.   .+++.+.++||+.......|+.|.+.||+..
T Consensus       112 ~~DiALLkl~~~~~~~~~~~~v~~i~L~~~~~~~~g~~v~v~G~p~g  158 (246)
T 1qtf_A          112 GLDLAIIKLKPNEKGESAGDLIQPANIPDHIDIAKGDKYSLLGYPYN  158 (246)
T ss_dssp             TSCCEEEEECCCTTSCCHHHHSCCCCCCSSCCCCTTCEEEEEECCTT
T ss_pred             CCCEEEEEEeCCccccccccceeeeecCCccccCCCCEEEEEECCCC
Confidence            6899999999877   5667788999997543337999999999653

>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}

Probab=96.62  E-value=0.0033  Score=38.77  Aligned_cols=43  Identities=14%  Similarity=0.323  Sum_probs=34.5

Q ss_pred             ccCCeEEEEecc--------ceeeccCeeeeecCCCCCCCCCceEEEEeeccc
Q psy15292         80 ISNDVALIKIDK--------DVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRT  124 (132)
Q Consensus        80 ~~~d~c~~~~~~--------~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~  124 (132)
                      ..+|++++++..        ++.+++.+.+++++..  ...|+.|.+.|||..
T Consensus        75 ~~~DiAll~l~~~~~~~~~~~~~~~~~v~~i~l~~~--~~~g~~v~v~G~p~~  125 (210)
T 2as9_A           75 GDEDISVMNIEEQAVERGPKGFNFNENVQAFNFAKD--AKVDDKIKVIGYPLP  125 (210)
T ss_dssp             SSSSCEEEEECSEEEEEETTEEEGGGSCCCCCBCSC--CCTTCEEEEEECSST
T ss_pred             CCCcEEEEEecCccccccccccccccccceeecCCC--CCCCCEEEEEeCCCC
Confidence            468999999987        5677888999999742  227999999999864

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*

Probab=96.61  E-value=0.00022  Score=51.88  Aligned_cols=48  Identities=25%  Similarity=0.290  Sum_probs=39.9

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCC------CCCCceEEEEeecccCcC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTV------KLVGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~------~~~g~~~~v~gwg~~~~~  127 (132)
                      ..+|++++++..++.+++.+.++|||....      ...+..|.+.|||.+...
T Consensus       548 ~~nDIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~~~~~~~~gwg~~~~~  601 (741)
T 3hrz_D          548 YDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQ  601 (741)
T ss_dssp             CTTCCEEEEESSCCCCCSSCCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSS
T ss_pred             cCCcEEEEEECCcCcCCCCccccccCCcccccchhccCCCCccccccccccccc
Confidence            478999999999999999999999996421      126889999999987654

>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}

Probab=96.52  E-value=0.0024  Score=39.01  Aligned_cols=45  Identities=18%  Similarity=0.372  Sum_probs=35.2

Q ss_pred             ccCCeEEEEecc--------ceeeccCeeeeecCCCCCCCCCceEEEEeecccCc
Q psy15292         80 ISNDVALIKIDK--------DVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH  126 (132)
Q Consensus        80 ~~~d~c~~~~~~--------~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~  126 (132)
                      ..+|++++++..        ++.+++.+.++|++..  ...|+.|.+.|||....
T Consensus        74 ~~~DiAll~l~~~~~~~~~~~~~~~~~v~pi~l~~~--~~~g~~~~~~G~g~~~~  126 (204)
T 2vid_A           74 GKEDVSVIQVEERAIERGPKGFNFNDNVTPFKYAAG--AKAGERIKVIGYPHPYK  126 (204)
T ss_dssp             SSSCCEEEEECSEEEEEETTEEEHHHHCCCCCBCSC--CCTTCEEEEEECCCCCC
T ss_pred             CCCeEEEEEEcCcccccccccccccccccccccCCc--CCCCCEEEEEeCCCCCC
Confidence            468999999985        4566777889999862  22799999999998543

>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A

Probab=96.45  E-value=0.005  Score=37.57  Aligned_cols=42  Identities=17%  Similarity=0.345  Sum_probs=34.0

Q ss_pred             ccCCeEEEEeccc----eeeccCeeeeecCCCCCCCCCceEEEEeecc
Q psy15292         80 ISNDVALIKIDKD----VVFKQHIIPVCLPDQTVKLVGKSATVAGWGR  123 (132)
Q Consensus        80 ~~~d~c~~~~~~~----~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~  123 (132)
                      ..+|++++++..+    +.+++.+.++||+..  ...|+.|.+.||+.
T Consensus        75 ~~~DiAll~l~~~~~~~~~~~~~v~pi~l~~~--~~~g~~v~v~G~p~  120 (200)
T 2w7s_A           75 GKEDLAIVHVHETSTEGLNFNKNVSYTKFADG--AKVKDRISVIGYPK  120 (200)
T ss_dssp             SSSSCEEEEECSBCTTSCBGGGSCCCCCBCCC--CCTTCEEEEEECTT
T ss_pred             CcceEEEEEECCCCCCcccccccccceecccc--CCCCCEEEEEECCC
Confidence            4689999999885    778888999999742  22699999999864

>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}

Probab=95.09  E-value=0.094  Score=33.23  Aligned_cols=94  Identities=16%  Similarity=0.176  Sum_probs=47.7

Q ss_pred             CCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee-ccCC-eEEEEeccceeeccC
Q psy15292         21 RNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS-ISND-VALIKIDKDVVFKQH   98 (132)
Q Consensus        21 ~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~-~~~d-~c~~~~~~~~~~~~~   98 (132)
                      .+|||||++..+.    .+.++.|........|+.+.+.||.......    .....+. .... .....+.. +...+ 
T Consensus       110 ~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~v~aiG~P~g~~~~----vt~G~vs~~~~~~~~~~~~~~-~i~td-  179 (245)
T 3sti_A          110 QSDIALLQIQNPS----KLTQIAIADSDKLRVGDFAVAVGNPFGLGQT----ATSGIVSALGRSGLNLEGLEN-FIQTD-  179 (245)
T ss_dssp             TTTEEEEEESSCC----SCCCCCBCCGGGCCTTBEEEEEECGGGSCCE----EEEEEEEECSSCSSCCTTCSS-CEEES-
T ss_pred             CCCEEEEEeccCC----CCceeeecCcCCCCCCCEEEEEECCCCCCCc----EEeeEEeeecccccCCCCccC-EEEEc-
Confidence            5899999997643    3456666644333378899999973211110    0001111 1110 00000000 01111 


Q ss_pred             eeeeecCCCCCCC---CCceEEEEeecccC
Q psy15292         99 IIPVCLPDQTVKL---VGKSATVAGWGRTR  125 (132)
Q Consensus        99 v~~icl~~~~~~~---~g~~~~v~gwg~~~  125 (132)
                       ..+|-++++.++   .|....|..|+...
T Consensus       180 -a~i~~G~SGGPLvn~~G~vVGI~s~~~~~  208 (245)
T 3sti_A          180 -ASINRGNSGGALLNLNGELIGINTAILAP  208 (245)
T ss_dssp             -SCCCTTTTTSEEECTTSCEEEEEECCC--
T ss_pred             -CCcCCCcchhHeecCCCeEEEEEEeEECC
Confidence             245667887766   68899999987653

>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}

Probab=94.17  E-value=0.069  Score=32.48  Aligned_cols=38  Identities=21%  Similarity=0.268  Sum_probs=25.4

Q ss_pred             CCceEEEEeCCCeeeCCCee-----eeeecCCCCcccCCcEEE
Q psy15292         21 RNDVALIKIDKDVVFKQHII-----PVCLPDQTVKLVGKSATV   58 (132)
Q Consensus        21 ~~diall~l~~~~~~~~~~~-----~~cl~~~~~~~~g~~~~~   58 (132)
                      .+|+||||+..+..+.+.+.     +++++.......|+.+..
T Consensus        54 ~~DiAlikl~~~~~~~~~v~~~~g~~v~l~~s~~~~vG~~v~~   96 (189)
T 2ea3_A           54 GNDYAFVRTGAGVNLLAQVNNYSGGRVQVAGHTAAPVGSAVCR   96 (189)
T ss_dssp             BSCEEEEEECTTCEEEEEEECSSSCEEECCBCCCCCTTCEEEE
T ss_pred             CCCEEEEEECCCCccccceEecCCceeecCCCcCCCCCCEEEE
Confidence            57999999998877666665     566664333336765543

>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1

Probab=94.17  E-value=0.054  Score=32.80  Aligned_cols=94  Identities=10%  Similarity=0.008  Sum_probs=47.7

Q ss_pred             CCceEEEEeCCCeeeCCCeee-----eeecCCCCcccCCcEEEeccCccccCCCcccccceeee--ccCCeEEEEeccce
Q psy15292         21 RNDVALIKIDKDVVFKQHIIP-----VCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--ISNDVALIKIDKDV   93 (132)
Q Consensus        21 ~~diall~l~~~~~~~~~~~~-----~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--~~~d~c~~~~~~~~   93 (132)
                      .+|+||||++.+..+...+..     +.+........|+.+...||......+     .+....  +....-  .+.. +
T Consensus        60 ~~DiAlikl~~~~~~~~~v~~~~g~~~~i~~~~~~~~G~~v~~~G~~~g~t~G-----~v~~~~~~v~~~~~--~~~~-~  131 (187)
T 1hpg_A           60 TNDYGIVRYTDGSSPAGTVDLYNGSTQDISSAANAVVGQAIKKSGSTTKVTSG-----TVTAVNVTVNYGDG--PVYN-M  131 (187)
T ss_dssp             BSCEEEEEECSSCCCCSEEECSSSCEEECCEECCCCTTCEEEEEETTTEEEEE-----EEEEEEEEEEETTE--EEEE-E
T ss_pred             CCCEEEEEeCCCCCcCceEEecCCceeeeccccCCCCCCEEEEEEcCCCEeEE-----EEEEeEEEEEeCCC--eEee-e
Confidence            479999999986654443321     333222222378888888986421111     111111  100000  0110 1


Q ss_pred             eeccCeeeeecCCCCCCC--CCceEEEEeeccc
Q psy15292         94 VFKQHIIPVCLPDQTVKL--VGKSATVAGWGRT  124 (132)
Q Consensus        94 ~~~~~v~~icl~~~~~~~--~g~~~~v~gwg~~  124 (132)
                      ...+  ..+|-++++.++  .+....|..||..
T Consensus       132 i~t~--~~~~~GdSGgpl~~~~~~vGi~s~~~~  162 (187)
T 1hpg_A          132 VRTT--ACSAGGDSGGAHFAGSVALGIHSGSSG  162 (187)
T ss_dssp             EEEC--CCCCTTCTTCEEEETTEEEEEEEEESC
T ss_pred             EEec--cccCCCCCCCeEEECCEEEEEEEeeCC
Confidence            1111  235678888777  5777888888753

>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A

Probab=93.72  E-value=0.073  Score=34.98  Aligned_cols=95  Identities=9%  Similarity=0.031  Sum_probs=51.3

Q ss_pred             CCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee-ccCCeEEEEeccceeeccC
Q psy15292         20 FRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS-ISNDVALIKIDKDVVFKQH   98 (132)
Q Consensus        20 ~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~-~~~d~c~~~~~~~~~~~~~   98 (132)
                      ..+|||||++..+    ..+.+++|+.......|+.+.+.||......    ......+. .....-.......+...+ 
T Consensus        87 ~~~DlAllk~~~~----~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~----~~~~g~vs~~~~~~~~~~~~~~~i~~d-  157 (318)
T 1te0_A           87 SLTDLAVLIIKAT----GGLPTIPINARRVPHIGDVVLAIGNPYNLGQ----TITQGIISATGRIGLNPTGRQNFLQTD-  157 (318)
T ss_dssp             TTTTEEEEECCCS----SCCCCCCCCTTCCCCTTCEEEEECCCSSSSC----CEEEEEEEECCCCCCCTTCSCCSEEES-
T ss_pred             CCceEEEEEEeCC----CCCceEEeeCccCCCCCCEEEEEEcCCCCCC----cEEeeEEecccccccCCCCcCCEEEEC-
Confidence            4689999999876    3467778875433337899999996321111    00011111 111000000000011111 


Q ss_pred             eeeeecCCCCCCC---CCceEEEEeeccc
Q psy15292         99 IIPVCLPDQTVKL---VGKSATVAGWGRT  124 (132)
Q Consensus        99 v~~icl~~~~~~~---~g~~~~v~gwg~~  124 (132)
                       ..+|-++++.++   .|....|..|+..
T Consensus       158 -~~~~~G~SGGPl~~~~G~vvGI~s~~~~  185 (318)
T 1te0_A          158 -ASINHGNSGGALVNSLGELMGINTLSFD  185 (318)
T ss_dssp             -SCCCTTTTTSEEECTTCCEEEEEECCSS
T ss_pred             -CCCCCCCCcCceECCCCeEEEEEeeeec
Confidence             246778887777   5889999999865

>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A

Probab=93.61  E-value=0.42  Score=33.07  Aligned_cols=96  Identities=18%  Similarity=0.230  Sum_probs=45.4

Q ss_pred             CCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEec--cCccccCCCcccccceeee-ccCC-eEEEEeccceeec
Q psy15292         21 RNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAG--WGRTRHASSLSSAIPTYVS-ISND-VALIKIDKDVVFK   96 (132)
Q Consensus        21 ~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~G--wG~~~~~~~~~~~~l~~~~-~~~d-~c~~~~~~~~~~~   96 (132)
                      ..|||||+++.     ..+.++.+........|+.+.+.|  ||....... .......++ ..+. .....+.. +...
T Consensus       124 ~~DlAlLkv~~-----~~l~~~~l~~s~~~~~G~~V~aiG~P~G~~~~~~~-~~vt~Givs~~~r~~~~~~~~~~-~iqt  196 (451)
T 3pv2_A          124 ETDLAVLKIDA-----KNLKSLVIGDSDKLEVGDFVVAIGNPFGLNSFGNS-QSATFGIVSALKRSDLNIEGVEN-FIQT  196 (451)
T ss_dssp             TTTEEEEECCC-----SSCCCCCBCCGGGCCTTCEEEEEECCCCC-----C-CEEEEEEEEEEC----------C-CEEE
T ss_pred             CCcEEEEEEcC-----cCCceeEecCcccCCCCCEEEEEECCCCccccccC-CceeEEEEeeccccccCCCCcce-EEEE
Confidence            57999999964     334555665433333789999999  665321110 011111111 1111 11111111 1111


Q ss_pred             cCeeeeecCCCCCCC---CCceEEEEeecccC
Q psy15292         97 QHIIPVCLPDQTVKL---VGKSATVAGWGRTR  125 (132)
Q Consensus        97 ~~v~~icl~~~~~~~---~g~~~~v~gwg~~~  125 (132)
                      +  ..++-+.++.++   .|....|..|+...
T Consensus       197 d--a~i~~GnSGGPl~n~~G~VIGI~t~~~~~  226 (451)
T 3pv2_A          197 D--AAINPGNSGGALVNAKGELIGINTAILSP  226 (451)
T ss_dssp             S--SCCCGGGTTSEEEETTCCEEEEEECCC--
T ss_pred             e--cccCCCCCcCcccCCCCeEEEEEeEeecC
Confidence            1  235566777666   68888888876543

>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*

Probab=92.95  E-value=0.076  Score=34.13  Aligned_cols=32  Identities=19%  Similarity=0.377  Sum_probs=24.7

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|+++++|..++                + .+..+.++|||++...+
T Consensus       110 ~~nDIALLrL~~~v----------------~-~~~~~~vsGWG~t~~~~  141 (268)
T 1arb_A          110 ATSDFTLLELNNAA----------------N-PAFNLFWAGWDRRDQNY  141 (268)
T ss_dssp             TTTTEEEEEESSCC----------------C-GGGCCEEBCEECCSCCC
T ss_pred             CCCceEEEEecCCC----------------C-CCCceEEeCcCccCCCC
Confidence            67999999998753                1 35568999999987653

>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A

Probab=92.78  E-value=0.14  Score=30.65  Aligned_cols=45  Identities=13%  Similarity=0.098  Sum_probs=32.6

Q ss_pred             ccCCeEEEEeccceeeccCeeee----ecCC-CCCCCCCceEEEEeeccc
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPV----CLPD-QTVKLVGKSATVAGWGRT  124 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~i----cl~~-~~~~~~g~~~~v~gwg~~  124 (132)
                      ..+|++++++..+..+++.+.++    +++. ......|+.|.+.||+..
T Consensus        52 ~~~DiAlikl~~~~~~~~~v~~i~~~~~~~~~~~~~~~G~~v~~~G~~~~  101 (181)
T 2sga_A           52 PNNDYGIIRHSNPAAADGRVYLYNGSYQDITTAGNAFVGQAVQRSGSTTG  101 (181)
T ss_dssp             SBSCEEEEEESCGGGCCCEEECSSSCEEECCEECCCCTTCEEEEEETTTE
T ss_pred             CCCCEEEEEccCCCcccceEEecCCcceeecccccCCCCCEEEEeecCCC
Confidence            46899999999877777677776    5553 222237999999998743

>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1

Probab=92.63  E-value=0.16  Score=32.01  Aligned_cols=42  Identities=21%  Similarity=0.146  Sum_probs=32.4

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeeccc
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRT  124 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~  124 (132)
                      ..+|++++++..+.   ..+.+++|+++.....|+.+.+.||+..
T Consensus       101 ~~~DlAllkl~~~~---~~~~~~~l~~s~~~~~G~~v~~iG~p~g  142 (239)
T 1l1j_A          101 EELDIAVIKIKASD---KKFPYLEFGDSDKVKIGEWAIAIGNPLG  142 (239)
T ss_dssp             TTTTEEEEEBCCSS---SCCCCCEECCGGGCCTTCEEEEEECTTS
T ss_pred             CCCCEEEEEEcCCC---CCCceEEecCccCCccccEEEEEECCCC
Confidence            67899999997654   4567889987643337999999999764

>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A

Probab=92.48  E-value=0.19  Score=31.45  Aligned_cols=39  Identities=21%  Similarity=0.300  Sum_probs=29.5

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeeccc
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRT  124 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~  124 (132)
                      -.+|++++++.     +..+.+++|+... ...|+.|.+.||+..
T Consensus       101 ~~~DiAll~l~-----~~~~~~~~l~~~~-~~~G~~v~v~G~p~g  139 (237)
T 3k6y_A          101 PSVDVAILAVP-----HLPPPPLVFAAEP-AKTGADVVVLGYPGG  139 (237)
T ss_dssp             TTTTEEEEECT-----TCCSCCCCBCSSC-CCTTCEEEEEECGGG
T ss_pred             CCCCEEEEEeC-----CCCCCceecCCCC-CCCCCEEEEEECCCC
Confidence            56899999987     3456788888432 227999999999854

>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}

Probab=91.20  E-value=0.39  Score=32.02  Aligned_cols=38  Identities=24%  Similarity=0.394  Sum_probs=26.2

Q ss_pred             CCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccC
Q psy15292         21 RNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWG   62 (132)
Q Consensus        21 ~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG   62 (132)
                      .+|||||++..+.    .+.++.+........|+.+.+.||.
T Consensus       110 ~~DlAlLkv~~~~----~~~~~~l~~s~~~~~G~~V~aiG~p  147 (345)
T 3stj_A          110 QSDIALLQIQNPS----KLTQIAIADSDKLRVGDFAVAVGNP  147 (345)
T ss_dssp             TTTEEEEEESSCC----SCCCCCBCCGGGCCTTBEEEEEECG
T ss_pred             CCCEEEEEEcccC----CCceEeecCcccCCCCCEEEEEECC
Confidence            4799999997643    3455566544333378899999984

>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A

Probab=91.08  E-value=2.7  Score=28.94  Aligned_cols=38  Identities=24%  Similarity=0.394  Sum_probs=27.1

Q ss_pred             CCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccC
Q psy15292         21 RNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWG   62 (132)
Q Consensus        21 ~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG   62 (132)
                      ..|||||++..+.    .+.++.+........|+.+.+.||.
T Consensus       110 ~~DlAllkv~~~~----~l~~~~l~~s~~~~~G~~v~aiG~P  147 (436)
T 4a8c_A          110 QSDIALLQIQNPS----KLTQIAIADSDKLRVGDFAVAVGNP  147 (436)
T ss_pred             CCCEEEEEecCCC----CCceEeccCcccCCCCCEEEEEEcC
Confidence            5799999997543    4566677644443478899999984

>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A

Probab=90.92  E-value=0.29  Score=30.57  Aligned_cols=41  Identities=24%  Similarity=0.223  Sum_probs=30.4

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeeccc
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRT  124 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~  124 (132)
                      ..+|++++++..+    ..+.++.+++......|+.+.+.||+..
T Consensus       108 ~~~DlAlL~l~~~----~~~~~~~l~~~~~~~~G~~v~~~G~p~g  148 (231)
T 3tjo_A          108 EKADIALIKIDHQ----GKLPVLLLGRSSELRPGEFVVAIGSPFS  148 (231)
T ss_dssp             TTTTEEEEECCCS----SCCCCCCBCCGGGCCTTCEEEEEEEEET
T ss_pred             CCCCEEEEEecCC----CCCCceecCCcCCCCCCCEEEEEECCCC
Confidence            6789999998754    3456677776544337999999999853

>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}

Probab=89.90  E-value=0.49  Score=28.63  Aligned_cols=40  Identities=15%  Similarity=0.222  Sum_probs=23.7

Q ss_pred             CCceEEEEeCCCeeeCCCee-----eeeecCCCCcccCCcEEEec
Q psy15292         21 RNDVALIKIDKDVVFKQHII-----PVCLPDQTVKLVGKSATVAG   60 (132)
Q Consensus        21 ~~diall~l~~~~~~~~~~~-----~~cl~~~~~~~~g~~~~~~G   60 (132)
                      .+|+||||+..+....+.+.     ++.+........|+.....|
T Consensus        57 ~~D~Alikl~~~~~~~~~v~~~~g~~~~i~~~~~~~vG~~vc~~G  101 (186)
T 2pfe_A           57 GRDMGWVRITSADTVTPLVNRYNGGTVTVTGSQEAATGSSVCRSG  101 (186)
T ss_dssp             BSCEEEEEECTTSEEEEEEECSSSCEEECCBCCCCCTTCEEEEEE
T ss_pred             CCCEEEEEeCCCcccccceeccCCceEecCCCCCCCCCCeEEEEE
Confidence            57999999998765555544     34443333223576544444

>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}

Probab=89.65  E-value=0.46  Score=31.64  Aligned_cols=42  Identities=26%  Similarity=0.321  Sum_probs=32.2

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeeccc
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRT  124 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~  124 (132)
                      ..+|++++++..+   ...+.+++++++.....|+.|.+.||+..
T Consensus        98 ~~~DlAlLkl~~~---~~~~~~i~l~~s~~~~~G~~v~~iG~p~g  139 (348)
T 3qo6_A           98 QDKDVAVLRIDAP---KNKLRPIPVGVSADLLVGQKVFAIGNPFG  139 (348)
T ss_dssp             GGGTEEEEECCCC---GGGCCCCCBCCSTTCCTTCEEEEEECGGG
T ss_pred             CcCCEEEEEEcCC---CCCceeEEecCcccCCCCCEEEEEECCCC
Confidence            5689999999764   24567888887644437999999999864

>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A

Probab=89.40  E-value=0.65  Score=30.49  Aligned_cols=39  Identities=18%  Similarity=0.330  Sum_probs=30.2

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeec
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWG  122 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg  122 (132)
                      ..+|++++++..+    ..+.+++++++.....|+.+.+.||+
T Consensus        85 ~~~DlAllkl~~~----~~~~~~~l~~~~~~~~G~~v~~~G~p  123 (324)
T 1y8t_A           85 PTSDIAVVRVQGV----SGLTPISLGSSSDLRVGQPVLAIGSP  123 (324)
T ss_dssp             TTTTEEEEEECSC----CSCCCCEECCSTTCCTTCEEEEEECG
T ss_pred             CCCCEEEEEECCC----CCCceEEecCcccCCCCCEEEEEEcC
Confidence            5789999999765    45678888875433379999999994

>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}

Probab=85.67  E-value=0.71  Score=27.91  Aligned_cols=40  Identities=13%  Similarity=0.278  Sum_probs=23.3

Q ss_pred             CCceEEEEeCCCeeeCCCeee------eeecCCCCcccCCcEEEec
Q psy15292         21 RNDVALIKIDKDVVFKQHIIP------VCLPDQTVKLVGKSATVAG   60 (132)
Q Consensus        21 ~~diall~l~~~~~~~~~~~~------~cl~~~~~~~~g~~~~~~G   60 (132)
                      .+|+||||+..+....+.+.+      +.+........|+.....|
T Consensus        59 ~~DiAlikl~~~~~~~~~v~~~g~~~~~~l~~~~~~~vG~~v~~~G  104 (188)
T 2oua_A           59 GNDAAFVRGTSNFTLTNLVSRYNSGGYATVSGSSTAPIGSQVCRSG  104 (188)
T ss_dssp             BSCEEEEEEEESCEEEEEEECGGGCSEEECCBCCCCCTTCEEEEEE
T ss_pred             CCCEEEEEeCCCCccccceeecCCcceEeccCccCCCCCCeEEEEE
Confidence            579999999877654444432      3444333323677555544

>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A

Probab=85.07  E-value=1.5  Score=27.38  Aligned_cols=41  Identities=17%  Similarity=0.212  Sum_probs=30.2

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeeccc
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRT  124 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~  124 (132)
                      -.+|+|++++..+.    .+.++.+++......|+.+.+.||+..
T Consensus        98 ~~~DlAll~l~~~~----~~~~~~l~~~~~~~~G~~v~~~G~p~~  138 (237)
T 3lgi_A           98 SLTDLAVLKINATG----GLPTIPINARRVPHIGDVVLAIGNPYN  138 (237)
T ss_dssp             TTTTEEEEECCCSS----CCCCCCCCTTCCCCTTBEEEEEECGGG
T ss_pred             CCCCEEEEEecCCC----CCceEeccCcccCCCCCEEEEEECCCC
Confidence            56899999987643    355677876543337999999999854

>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A

Probab=84.30  E-value=1.6  Score=28.71  Aligned_cols=41  Identities=24%  Similarity=0.223  Sum_probs=28.5

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeeccc
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRT  124 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~  124 (132)
                      ..+|++++++..+    ..+.++.+++......|+.+.+.||+..
T Consensus        91 ~~~DlAlL~l~~~----~~~~~~~l~~~~~~~~G~~v~~~G~p~g  131 (332)
T 3num_A           91 EKADIALIKIDHQ----GKLPVLLLGRSSELRPGEFVVAIGSPFS  131 (332)
T ss_dssp             TTTTEEEEEECCS----SCCCCCCBCCTTSCCTTCEEEEECC---
T ss_pred             CCCCeEEEEEcCC----CCCceeeecCcccCCCCCEEEEEECCCC
Confidence            5689999998764    3355677776544337999999999854

>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1

Probab=83.13  E-value=1.2  Score=29.27  Aligned_cols=42  Identities=14%  Similarity=0.094  Sum_probs=31.4

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTR  125 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~  125 (132)
                      ..+|++++++...    ..+.+++++++.....|+.+.+.||+...
T Consensus        92 ~~~DlAllkl~~~----~~~~~~~l~~~~~~~~G~~v~~~G~p~~~  133 (325)
T 1lcy_A           92 PVADIATLRIQTK----EPLPTLPLGRSADVRQGEFVVAMGSPFAL  133 (325)
T ss_dssp             TTTTEEEEECCCS----SCCCCCCBCCGGGCCTTCEEEECCCTTSS
T ss_pred             CCCCEEEEEEcCC----CCCceEEecccccCCCCCEEEEEECCCCC
Confidence            6789999998754    24567888875333379999999999743

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	132
d1hj8a_	222	b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon	2e-05
d1hj8a_	222	b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon	0.002
d2f91a1	237	b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed c	5e-05
d1sgfa_	228	b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus	2e-04
d1j16a_	223	b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicu	3e-04
d1arba_	263	b.47.1.1 (A:) Achromobacter protease {Achromobacte	5e-04

>d1hj8a_ b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon (Salmo salar) [TaxId: 8030]} Length = 222

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: North atlantic salmon (Salmo salar) [TaxId: 8030]

 Score = 40.0 bits (92), Expect = 2e-05
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)

Query: 1   MFKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAG 60
              +++ +   HP YS  +  ND+ LIK+ K      ++ PV LP       G   TV+G
Sbjct: 62  EQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSCAP-AGTMCTVSG 120

Query: 61  WGRTRH 66
           WG T  
Sbjct: 121 WGNTMS 126

>d1hj8a_ b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon (Salmo salar) [TaxId: 8030]} Length = 222

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: North atlantic salmon (Salmo salar) [TaxId: 8030]

 Score = 34.2 bits (77), Expect = 0.002
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 77  YVSISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH 126
             +I ND+ LIK+ K      ++ PV LP       G   TV+GWG T  
Sbjct: 78  SYNIDNDIMLIKLSKPATLNTYVQPVALPTSCAP-AGTMCTVSGWGNTMS 126

>d2f91a1 b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]

 Score = 39.3 bits (90), Expect = 5e-05
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS 69
            +H  +  +   ND++L+K+   + F  ++ P+ LP+Q     G    V GWG T    +
Sbjct: 83  ILHENFDYNLLDNDISLLKLSGSLTFNDNVAPIALPEQGHTATGD-VIVTGWGTTSEGGN 141

Query: 70  LSS 72
              
Sbjct: 142 TPD 144

>d1sgfa_ b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus musculus) [TaxId: 10090]} Length = 228

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: 7S NGF protease subunits
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.0 bits (84), Expect = 2e-04
 Identities = 17/80 (21%), Positives = 30/80 (37%), Gaps = 1/80 (1%)

Query: 1   MFKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAG 60
               N      H      D+ ND+ L+++ K       + P+ LP +  K +G +   +G
Sbjct: 65  HPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPK-LGSTCLASG 123

Query: 61  WGRTRHASSLSSAIPTYVSI 80
           WG T             V++
Sbjct: 124 WGSTTPIKFKYPDDLQCVNL 143

>d1j16a_ b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 223

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.5 bits (83), Expect = 3e-04
 Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 1/71 (1%)

Query: 10  FVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASS 69
             HP +    + ND+ LIK+   V     +  V LP       G    ++GWG T  +  
Sbjct: 71  IKHPNFDRETYNNDIMLIKLSSPVKLNARVATVALPSSCAP-AGTQCLISGWGNTLSSGV 129

Query: 70  LSSAIPTYVSI 80
               +   +  
Sbjct: 130 NEPDLLQCLDA 140

>d1arba_ b.47.1.1 (A:) Achromobacter protease {Achromobacter lyticus, strain m497-1 [TaxId: 224]} Length = 263

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Achromobacter protease
species: Achromobacter lyticus, strain m497-1 [TaxId: 224]

 Score = 36.1 bits (82), Expect = 5e-04
 Identities = 8/79 (10%), Positives = 19/79 (24%), Gaps = 1/79 (1%)

Query: 5   NTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPD-QTVKLVGKSATVAGWGR 63
           NT  S  +   S S  ++   +        F    +         +   G       +  
Sbjct: 84  NTPASGANGDGSMSQTQSGSTVKATYATSDFTLLELNNAANPAFNLFWAGWDRRDQNYPG 143

Query: 64  TRHASSLSSAIPTYVSISN 82
                  + A     + ++
Sbjct: 144 AIAIHHPNVAEKRISNSTS 162

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	132
d1lo6a_	221	Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]}	99.66
d1j16a_	223	Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 101	99.64
d1azza_	226	Crab collagenase {Atlantic sand fiddler crab (Uca	99.6
d1fi8a_	227	Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]	99.59
d1eufa_	224	Duodenase {Cow (Bos taurus) [TaxId: 9913]}	99.58
d1ekbb_	235	Enteropeptidase (enterokinase light chain) {Cow (B	99.58
d1bioa_	228	Factor D {Human (Homo sapiens) [TaxId: 9606]}	99.57
d1fq3a_	227	Granzyme B {Human (Homo sapiens) [TaxId: 9606]}	99.57
d1fuja_	221	Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 96	99.55
d3rp2a_	224	Chymase II (mast cell proteinase II) {Rat (Rattus	99.54
d1op0a_	234	Venom serine protease {Hundred-pace snake (Agkistr	99.54
g1fiw.1	274	Beta-acrosin {Sheep (Ovis aries) [TaxId: 9940]}	99.53
d1eq9a_	222	(alpha,gamma)-chymotrypsin(ogen) {Red fire ant (So	99.53
d2f91a1	237	Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus	99.53
d1orfa_	232	Granzyme A {Human (Homo sapiens) [TaxId: 9606]}	99.52
d2z7fe1	218	Elastase {Human (Homo sapiens) [TaxId: 9606]}	99.52
d1t32a1	224	Cathepsin G {Human (Homo sapiens) [TaxId: 9606]}	99.52
g1gg6.1	238	(alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus)	99.51
d1hj9a_	223	Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}	99.51
d1npma_	225	Neuropsin {Mouse (Mus musculus) [TaxId: 10090]}	99.51
d1pytd_	251	(alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus)	99.51
d1fxya_	228	Coagulation factor Xa-trypsin chimera {Synthetic,	99.51
d1nn6a_	224	Chymase (mast cell protease I) {Human (Homo sapien	99.49
d1a7sa_	225	Heparin binding protein, HBP {Human (Homo sapiens)	99.49
g2pka.1	232	Kallikrein A {Pig (Sus scrofa) [TaxId: 9823]}	99.47
d1mzaa_	240	Granzyme K {Human (Homo sapiens) [TaxId: 9606]}	99.47
d2fpza1	243	beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]}	99.47
d1eaxa_	241	Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 960	99.46
d1q3xa1	242	Mannan-binding lectin serine protease 2 (MASP-2),	99.45
d1sgfa_	228	7S NGF protease subunits {Mouse (Mus musculus) [Ta	99.45
d1hj8a_	222	Trypsin(ogen) {North atlantic salmon (Salmo salar)	99.43
d1ao5a_	237	Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]	99.43
d1gdna_	224	Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5	99.43
d2qy0b1	240	Complement C1R protease, catalytic domain {Human (	99.42
d1tona_	235	Tonin {Rat (Rattus rattus) [TaxId: 10117]}	99.41
d1xx9a_	237	Coagulation factor XI {Human (Homo sapiens) [TaxId	99.4
d1z8ga1	255	Hepsin, catalytic domain {Human (Homo sapiens) [Ta	99.38
d1gvza_	237	Prostate specific antigen (PSA kallikrein) {Horse	99.36
d1elva1	259	Complement C1S protease, catalytic domain {Human (	99.35
d2hlca_	230	HL collagenase {Common cattle grub (Hypoderma line	99.35
d1fona_	232	Procarboxypeptidase A-S6 subunit III (zymogen E) {	99.34
d1autc_	240	Activated protein c (autoprothrombin IIa) {Human (	99.34
d1brup_	241	Elastase {Pig (Sus scrofa) [TaxId: 9823]}	99.29
g1h8d.1	289	Thrombin {Human (Homo sapiens) [TaxId: 9606]}	99.28
d2p3ub1	233	Coagulation factor Xa, protease domain {Human (Hom	99.26
d1m9ua_	241	Elastase {Worm (Eisenia fetida) [TaxId: 6396]}	99.21
d1si5h_	234	Hepatocyte growth factor, HGF {Human (Homo sapiens	99.19
d1elta_	236	Elastase {Salmon (Salmo salar) [TaxId: 8030]}	99.16
d1rfna_	235	Coagulation factor IXa, protease domain {Human (Ho	99.1
g1rtf.1	260	Two-chain tissue plasminogen activator (TC)-T-PA {	99.1
d1rrka1	287	Factor B {Human (Homo sapiens) [TaxId: 9606]}	99.09
d1os8a_	223	Trypsin {Streptomyces griseus, strain k1 [TaxId: 1	98.97
d2bz6h1	254	Coagulation factor VIIa {Human (Homo sapiens) [Tax	98.95
g1gj7.1	256	Urokinase-type plasminogen activator (LMW U-PA), c	98.86
d1gvkb_	240	Elastase {Pig (Sus scrofa) [TaxId: 9823]}	98.86
d1rjxb_	247	Plasmin(ogen), catalytic domain {Human (Homo sapie	98.78
d1j16a_	223	Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 101	98.07
d1ekbb_	235	Enteropeptidase (enterokinase light chain) {Cow (B	98.01
d1lo6a_	221	Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]}	97.89
g1fiw.1	274	Beta-acrosin {Sheep (Ovis aries) [TaxId: 9940]}	97.81
d1fxya_	228	Coagulation factor Xa-trypsin chimera {Synthetic,	97.81
d1p3ca_	215	Glutamyl endopeptidase {Bacillus intermedius [TaxI	97.79
d1op0a_	234	Venom serine protease {Hundred-pace snake (Agkistr	97.75
g2pka.1	232	Kallikrein A {Pig (Sus scrofa) [TaxId: 9823]}	97.75
d1npma_	225	Neuropsin {Mouse (Mus musculus) [TaxId: 10090]}	97.74
d1eq9a_	222	(alpha,gamma)-chymotrypsin(ogen) {Red fire ant (So	97.7
d1fuja_	221	Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 96	97.7
d1fi8a_	227	Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]	97.66
d1ao5a_	237	Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]	97.61
d1fq3a_	227	Granzyme B {Human (Homo sapiens) [TaxId: 9606]}	97.6
d1hj8a_	222	Trypsin(ogen) {North atlantic salmon (Salmo salar)	97.6
g1gg6.1	238	(alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus)	97.57
d1a7sa_	225	Heparin binding protein, HBP {Human (Homo sapiens)	97.55
d2z7fe1	218	Elastase {Human (Homo sapiens) [TaxId: 9606]}	97.54
d1gdna_	224	Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5	97.54
d1orfa_	232	Granzyme A {Human (Homo sapiens) [TaxId: 9606]}	97.53
d1pytd_	251	(alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus)	97.53
d1azza_	226	Crab collagenase {Atlantic sand fiddler crab (Uca	97.5
d1tona_	235	Tonin {Rat (Rattus rattus) [TaxId: 10117]}	97.48
d2f91a1	237	Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus	97.46
d2qy0b1	240	Complement C1R protease, catalytic domain {Human (	97.45
d1eufa_	224	Duodenase {Cow (Bos taurus) [TaxId: 9913]}	97.44
d1gvza_	237	Prostate specific antigen (PSA kallikrein) {Horse	97.43
d1hj9a_	223	Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}	97.38
d1elta_	236	Elastase {Salmon (Salmo salar) [TaxId: 8030]}	97.37
d1z8ga1	255	Hepsin, catalytic domain {Human (Homo sapiens) [Ta	97.36
d1autc_	240	Activated protein c (autoprothrombin IIa) {Human (	97.28
d1bioa_	228	Factor D {Human (Homo sapiens) [TaxId: 9606]}	97.25
d3rp2a_	224	Chymase II (mast cell proteinase II) {Rat (Rattus	97.23
d1mzaa_	240	Granzyme K {Human (Homo sapiens) [TaxId: 9606]}	97.16
d1sgfa_	228	7S NGF protease subunits {Mouse (Mus musculus) [Ta	97.14
d1elva1	259	Complement C1S protease, catalytic domain {Human (	97.13
d1m9ua_	241	Elastase {Worm (Eisenia fetida) [TaxId: 6396]}	97.09
d1xx9a_	237	Coagulation factor XI {Human (Homo sapiens) [TaxId	97.03
d1t32a1	224	Cathepsin G {Human (Homo sapiens) [TaxId: 9606]}	97.03
d1brup_	241	Elastase {Pig (Sus scrofa) [TaxId: 9823]}	96.99
d1si5h_	234	Hepatocyte growth factor, HGF {Human (Homo sapiens	96.99
d2fpza1	243	beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]}	96.94
g1h8d.1	289	Thrombin {Human (Homo sapiens) [TaxId: 9606]}	96.89
d1eaxa_	241	Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 960	96.88
d1nn6a_	224	Chymase (mast cell protease I) {Human (Homo sapien	96.88
d1fona_	232	Procarboxypeptidase A-S6 subunit III (zymogen E) {	96.84
d1q3xa1	242	Mannan-binding lectin serine protease 2 (MASP-2),	96.73
d2bz6h1	254	Coagulation factor VIIa {Human (Homo sapiens) [Tax	96.41
d1agja_	242	Epidermolytic (exfoliative) toxin A {Staphylococcu	96.27
d1gvkb_	240	Elastase {Pig (Sus scrofa) [TaxId: 9823]}	96.18
d2p3ub1	233	Coagulation factor Xa, protease domain {Human (Hom	95.98
d1rjxb_	247	Plasmin(ogen), catalytic domain {Human (Homo sapie	95.76
d1rfna_	235	Coagulation factor IXa, protease domain {Human (Ho	95.52
d2hlca_	230	HL collagenase {Common cattle grub (Hypoderma line	95.33
d1arba_	263	Achromobacter protease {Achromobacter lyticus, str	94.76
d1rrka1	287	Factor B {Human (Homo sapiens) [TaxId: 9606]}	94.5
d1os8a_	223	Trypsin {Streptomyces griseus, strain k1 [TaxId: 1	92.89
g1gj7.1	256	Urokinase-type plasminogen activator (LMW U-PA), c	91.83
g1rtf.1	260	Two-chain tissue plasminogen activator (TC)-T-PA {	87.89
d1hpga_	187	Glutamic acid-specific protease {Streptomyces gris	81.18

>d1lo6a_ b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=1.7e-16  Score=97.90  Aligned_cols=123  Identities=15%  Similarity=0.281  Sum_probs=90.3

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      +...+.++++||+|+.....+|||||+|..++.++++++|+||+..... .+..+.++|||.......  ...++...  
T Consensus        64 ~~~~~~~~~~~p~y~~~~~~~diAll~l~~~~~~~~~v~pi~l~~~~~~-~~~~~~~~Gwg~~~~~~~--~~~l~~~~~~  140 (221)
T d1lo6a_          64 EQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSELIQPLPLERDCSA-NTTSCHILGWGKTADGDF--PDTIQCAYIH  140 (221)
T ss_dssp             EEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCCBCCCTTC-CCCEEEEEESSCCTTSSC--CSBCEEEEEE
T ss_pred             eeeeccccccCCCcccccccceeEEeecccccceeeeEEeccccccCCc-ccceEEEEecccccCCCC--CccceEEEEE
Confidence            3567889999999999999999999999999999999999999976654 778899999998765432  33444433  


Q ss_pred             -ccCCeEEEEeccceee-------ccCeeeeecCCCCCCC--CCceEEEEeecccCcC
Q psy15292         80 -ISNDVALIKIDKDVVF-------KQHIIPVCLPDQTVKL--VGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 -~~~d~c~~~~~~~~~~-------~~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~~  127 (132)
                       ++++.|...+.....-       ...-...|.++.+.++  .+...+|..||...+.
T Consensus       141 ~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~c~gd~G~Pl~~~~~l~Gi~S~g~~~c~  198 (221)
T d1lo6a_         141 LVSREECEHAYPGQITQNMLCAGDEKYGKDSCQGDSGGPLVCGDHLRGLVSWGNIPCG  198 (221)
T ss_dssp             EECHHHHHHHSTTTCCTTEEEEECTTTCCBCCTTTTTCEEEETTEEEEEEEECCSSCC
T ss_pred             EecHHHHHHHcCCCccCCceeeeccccCCCCccCCCCCcEEECCEEEEEEEEccCCCC
Confidence             6677776554432211       1112236777887776  6778889999987544

>d1j16a_ b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.64  E-value=4e-16  Score=96.39  Aligned_cols=122  Identities=18%  Similarity=0.359  Sum_probs=89.2

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      ....+.++++||+|+.....+||||++|+.++.++++++|+|||..... .+..+++.|||............+++..  
T Consensus        63 ~~~~~~~~~~hp~y~~~~~~~diAll~L~~~v~~~~~~~picL~~~~~~-~~~~~~~~g~g~~~~~~~~~~~~l~~~~~~  141 (223)
T d1j16a_          63 QFVNAAKIIKHPNFDRETYNNDIMLIKLSSPVKLNARVATVALPSSCAP-AGTQCLISGWGNTLSSGVNEPDLLQCLDAP  141 (223)
T ss_dssp             EEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCSSCCC-TTCEEEEEESSCCCSSSCCCCSBCEEEEEE
T ss_pred             eeeeeeeEEecCCCCccccceeEEEEEecCccccceeEEEEecCCcCCC-CCCEEEEEeeeeeeCCCccCcceeeEEEEE
Confidence            3567788999999999999999999999999999999999999976554 7888999999987665544455565544  


Q ss_pred             -ccCCeEEEEeccceeeccCe--------eeeecCCCCCCC--CCceEEEEeecccC
Q psy15292         80 -ISNDVALIKIDKDVVFKQHI--------IPVCLPDQTVKL--VGKSATVAGWGRTR  125 (132)
Q Consensus        80 -~~~d~c~~~~~~~~~~~~~v--------~~icl~~~~~~~--~g~~~~v~gwg~~~  125 (132)
                       ++++.|....... ...+.+        ...|.++.+.++  .+..++|..||...
T Consensus       142 ~~~~~~C~~~~~~~-~~~~~~C~~~~~~~~~~c~gd~g~pl~~~~~L~Gi~s~~~~~  197 (223)
T d1j16a_         142 LLPQADCEASSSFI-ITDNMVCVGFLEGGKDACQGDSGGPVVCNGELQGIVSWGYGC  197 (223)
T ss_dssp             EECHHHHHSSSSCC-CCTTEEEESCTTCSCBCCTTCTTCEEEETTEEEEEEEECSSS
T ss_pred             EEEhhHhhccccce-eCCCceEEecCCCCCcccCCccCCcEEEeeEEEEEEEEccCC
Confidence             6667776433211 111222        235667776665  67888899998654

>d1azza_ b.47.1.2 (A:) Crab collagenase {Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Crab collagenase
species: Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]

Probab=99.60  E-value=8.3e-16  Score=95.06  Aligned_cols=124  Identities=23%  Similarity=0.274  Sum_probs=91.1

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      +...|.++++||+|......+||||++|..++.+++.++|+|++..... .+..+.++|||............+++..  
T Consensus        66 ~~~~v~~i~~~~~y~~~~~~~diAll~l~~~~~~~~~~~pi~l~~~~~~-~~~~~~~~g~g~~~~~~~~~~~~l~~~~~~  144 (226)
T d1azza_          66 VTIQSTDFTVHENYNSFVISNDIAVIRLPVPVTLTAAIATVGLPSTDVG-VGTVVTPTGWGLPSDSALGISDVLRQVDVP  144 (226)
T ss_dssp             EEEEECCEEECTTCBTTTTBSCCEEEECSSCCCCCSSSCCCBCCSSCCC-TTCEEEEEESSCSSTTCSSSCSBCEECCEE
T ss_pred             EEEEeeeeeeccccccccccchhhhhhcCCccceeeccccccccccccc-cccceeeecccccCCCcCccccEeEEEEEE
Confidence            4577899999999999999999999999999999999999999887654 6778889999987665444444555433  


Q ss_pred             -ccCCeEEEEeccce-----eeccCeeeeecCCCCCCC--CCceEEEEeecccCc
Q psy15292         80 -ISNDVALIKIDKDV-----VFKQHIIPVCLPDQTVKL--VGKSATVAGWGRTRH  126 (132)
Q Consensus        80 -~~~d~c~~~~~~~~-----~~~~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~  126 (132)
                       ++++.|...+....     .........|-++.+.++  .+...+|..||....
T Consensus       145 ~~~~~~C~~~~~~~~~~~~~~~~~~~~~~c~gdsG~Pl~~~~~l~Gi~S~g~~~~  199 (226)
T d1azza_         145 IMSNADCDAVYGIVTDGNICIDSTGGKGTCNGDSGGPLNYNGLTYGITSFGAAAG  199 (226)
T ss_dssp             EECHHHHHHHHSCCCTTEEEECCTTTCBCCTTCTTCEEEETTEEEEEEEEEETTC
T ss_pred             EEeHHHhhhhhCcccccceeccccCCCccccCCcCCCEEEcCEEEEEEEEeCCCC
Confidence             66666654332211     111222346778887777  788889998887653

>d1fi8a_ b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.59  E-value=1.6e-15  Score=93.75  Aligned_cols=124  Identities=19%  Similarity=0.256  Sum_probs=91.3

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +...|.+++.||+|+.....+||||++|..++.++++++|+|++...... .+..+...|||....... ....+++.. 
T Consensus        68 ~~~~v~~i~~~~~~~~~~~~~diall~l~~~i~~~~~v~picl~~~~~~~~~~~~~~~~g~g~~~~~~~-~~~~l~~~~~  146 (227)
T d1fi8a_          68 QIIPVVKIIPHPAYNSKTISNDIMLLKLKSKAKRSSAVKPLNLPRRNVKVKPGDVCYVAGWGKLGPMGK-YSDTLQEVEL  146 (227)
T ss_dssp             EEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEESCBSSTTCC-BCSBCEEEEE
T ss_pred             eEEEEEEEEecccccCccccchhhhhhccCceeeeeeEEEEEecccCcccCCCCEEEEEeeccccCCCC-CCceeeEEEE
Confidence            46788999999999999999999999999999999999999998766543 678899999998766543 344455544 


Q ss_pred             --ccCCeEEEEeccceeec--------cCeeeeecCCCCCCC--CCceEEEEeecccCc
Q psy15292         80 --ISNDVALIKIDKDVVFK--------QHIIPVCLPDQTVKL--VGKSATVAGWGRTRH  126 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~~~--------~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~  126 (132)
                        ++++.|...+.......        ..-...|.++++.++  .....+|..||....
T Consensus       147 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~c~gdsGgPl~~~~~l~Gi~S~g~~~~  205 (227)
T d1fi8a_         147 TVQEDQKCESYLKNYFDKANEICAGDPKIKRASFRGDSGGPLVCKKVAAGIVSYGQNDG  205 (227)
T ss_dssp             EBCCHHHHHHHTTTTCCTTTEEEESCTTSCCBCCTTCTTSEEEETTEEEEEEEEEETTC
T ss_pred             EEEEchhhhhhhhcccccceeeeeeeccccCCCcCCCcCCEEEECCEEEEEEEEcCCCC
Confidence              56666665443332221        222346778887776  578888998886554

>d1eufa_ b.47.1.2 (A:) Duodenase {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Duodenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.58  E-value=3e-15  Score=92.38  Aligned_cols=123  Identities=20%  Similarity=0.346  Sum_probs=87.9

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.++++||+|+.....+|||||+|..|+.+++.+.|+|++...... .+..+.+.|||........ ...++... 
T Consensus        67 ~~~~V~~i~~hp~~~~~~~~~DiAll~L~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~-~~~~~~~~~  145 (224)
T d1eufa_          67 QVIPVRRPIPHPDYNDETLANDIMLLKLTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLGVNMPS-TDKLQEVDL  145 (224)
T ss_dssp             EEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEESCBSSTTCCB-CSBCEEEEE
T ss_pred             EEEEEEEEEECCccccccccccceeeeccceeEEeeeEeeeeeecccccccCCceEEEecccceeccccc-cccceeeee
Confidence            46789999999999999999999999999999999999999998765443 6778889999987655432 33333332 


Q ss_pred             --ccCCeEEEEeccce-------eeccCeeeeecCCCCCCC--CCceEEEEeecccC
Q psy15292         80 --ISNDVALIKIDKDV-------VFKQHIIPVCLPDQTVKL--VGKSATVAGWGRTR  125 (132)
Q Consensus        80 --~~~d~c~~~~~~~~-------~~~~~v~~icl~~~~~~~--~g~~~~v~gwg~~~  125 (132)
                        ++++.|...+....       .....-...|.++++.++  .+...+|..||...
T Consensus       146 ~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~c~~dsGgpl~~~~~l~Gi~s~g~~~  202 (224)
T d1eufa_         146 EVQSEEKCIARFKNYIPFTQICAGDPSKRKNSFSGDSGGPLVCNGVAQGIVSYGRND  202 (224)
T ss_dssp             EBCCTHHHHTTCTTCCTTTEEEESCTTSCCBCCTTCTTCEEEETTEEEEEEEECCTT
T ss_pred             ccCCHHHHHHHhccccccceeeeeccccccccccCCCCCeEEEcCEEEEEEEEcCCC
Confidence              66666654332211       111222346777777766  67788899998654

>d1ekbb_ b.47.1.2 (B:) Enteropeptidase (enterokinase light chain) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Enteropeptidase (enterokinase light chain)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.58  E-value=3e-15  Score=92.88  Aligned_cols=123  Identities=21%  Similarity=0.395  Sum_probs=82.7

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.+.++++||+|+.....+||||++|+.++.++..++|+|||...... .+..+.+.||+........ ...+++.. 
T Consensus        71 ~~~~v~~~~~hp~~~~~~~~~diAli~L~~~v~~~~~~~picLp~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~l~~~~~  149 (235)
T d1ekbb_          71 ETRLIDQIVINPHYNKRRKNNDIAMMHLEMKVNYTDYIQPICLPEENQVFPPGRICSIAGWGALIYQGST-ADVLQEADV  149 (235)
T ss_dssp             EEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCB-CSBCEEEEE
T ss_pred             eEeeeeeeeecccccccCccchhhhhhhcCceecCCceeeEECCCccccCCcceEEEEecccccccCCcc-cccceeeEE
Confidence            56789999999999999999999999999999999999999998765543 6778999999987655432 33344433 


Q ss_pred             --ccCCeEEEEeccceeeccCe--------eeeecCCCCCCC--CCc----eEEEEeecccC
Q psy15292         80 --ISNDVALIKIDKDVVFKQHI--------IPVCLPDQTVKL--VGK----SATVAGWGRTR  125 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~~~~~v--------~~icl~~~~~~~--~g~----~~~v~gwg~~~  125 (132)
                        ...+.|.............+        ...|.++++.++  .+.    ..+|..||...
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~c~gdsG~pl~~~~~~~~~l~Gi~S~g~~~  211 (235)
T d1ekbb_         150 PLLSNEKCQQQMPEYNITENMVCAGYEAGGVDSCQGDSGGPLMCQENNRWLLAGVTSFGYQC  211 (235)
T ss_dssp             EBCCHHHHHHHCTTSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSS
T ss_pred             EEecHHHhcccccccccCcccEEEEcCCCCcccccCCCCCccEEccCCEEEEEEEEEecCCC
Confidence              33333322211111111111        135777776665  222    67777887653

>d1bioa_ b.47.1.2 (A:) Factor D {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=8.1e-15  Score=90.29  Aligned_cols=124  Identities=18%  Similarity=0.234  Sum_probs=87.6

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +...|.+++.||.|+.....+|||||+|..++.+++.+.|+|++...... .+..+.+.|||.+...... ...+++.. 
T Consensus        68 ~~~~v~~i~~~~~y~~~~~~~diAll~l~~~~~~~~~v~p~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~l~~~~~  146 (228)
T d1bioa_          68 RLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRR-PDSLQHVLL  146 (228)
T ss_dssp             EEEEEEEEEECTTCCTTCCTTCCEEEEESSCCCCBTTBCCCCBCCSCCCCCTTCEEEEEESSCCSTTCCC-CSBCEEEEE
T ss_pred             eeccceeeeeeecccCCCcccceehhhccccceeeeEEeeecccccccccccCceEEEecceeecCCCCC-CCcceEEEE
Confidence            45789999999999999999999999999999999999999998755433 6777888999987665432 33344433 


Q ss_pred             --ccCCeEEEEecccee-------eccCeeeeecCCCCCCC--CCceEEEEeecccCc
Q psy15292         80 --ISNDVALIKIDKDVV-------FKQHIIPVCLPDQTVKL--VGKSATVAGWGRTRH  126 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~-------~~~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~  126 (132)
                        ++++.|.........       ........|.++++.++  .+....|..||...+
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsG~Pl~~~~~LvGi~S~g~~~c  204 (228)
T d1bioa_         147 PVLDRATCNRRTHHDGAITERLMCAESNRRDSCKGDSGGPLVCGGVLEGVVTSGSRVC  204 (228)
T ss_dssp             EEECHHHHHSTTTTTTCCCTTEEEECCSSCBCCTTTTTCEEEETTEEEEEECCSCCCS
T ss_pred             EEeCHHHHhhhhcccccccccceeecccCCCcccCCcCccEEEcCEEEEEEEECCCCC
Confidence              444444332222111       11222346777887776  688889999986554

>d1fq3a_ b.47.1.2 (A:) Granzyme B {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=1e-15  Score=94.63  Aligned_cols=123  Identities=20%  Similarity=0.346  Sum_probs=86.9

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +...|.+++.||.|+.....+||||++|..++.++++++++||+...... .+..+.+.|||.+..... ....+++.. 
T Consensus        67 ~~~~v~~i~~~~~~~~~~~~~DiAll~L~~~i~~~~~v~~~~l~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~l~~~~~  145 (227)
T d1fq3a_          67 QFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGK-HSHTLQEVKM  145 (227)
T ss_dssp             EEEEEEEECCCTTCCTTTTTTCCEEEEESSCCCCCSSCCCCCCCCSSCCCCTTCEEECCCSCCSTTTSC-CCSBCCBCEE
T ss_pred             EEEEEEEEEecccCCCCCCCcchhhhhcccccccceeEEEEeecccccccCCCCEEEEEeeccccCccc-ccccceEEEE
Confidence            46789999999999999999999999999999999999999998765543 677888999998765443 233444433 


Q ss_pred             --ccCCeEEEEeccceee--------ccCeeeeecCCCCCCC--CCceEEEEeecccC
Q psy15292         80 --ISNDVALIKIDKDVVF--------KQHIIPVCLPDQTVKL--VGKSATVAGWGRTR  125 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~~--------~~~v~~icl~~~~~~~--~g~~~~v~gwg~~~  125 (132)
                        ++++.|...+......        .+.....|.++++.++  .+...+|..||...
T Consensus       146 ~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsG~pl~~~~~l~GI~s~g~~~  203 (227)
T d1fq3a_         146 TVQEDRKCESDLRHYYDSTIELCVGDPEIKKTSFKGDSGGPLVCNKVAQGIVSYGRNN  203 (227)
T ss_dssp             ECCCHHHHTTTCTTTCCTTTEECCSCTTSSCBCCTTCTTCBCBSSSSCCCEECCCCTT
T ss_pred             EEEcHHHhhhhhcccccccceeeeeccccccccccCCCCceEEEeCEEEEEEEEcCCC
Confidence              6667775443221111        1122235666666665  56777889998643

>d1fuja_ b.47.1.2 (A:) Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Myeloblastin, PR3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=2.3e-14  Score=88.04  Aligned_cols=122  Identities=15%  Similarity=0.189  Sum_probs=85.5

Q ss_pred             EEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee--
Q psy15292          3 KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         3 ~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      ...+.+++.||.|+...+.+|||||+|.+++.++++++|+|||...... .+..+.+.||+........ ...+....  
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~diAll~L~~~~~~~~~v~picl~~~~~~~~~~~~~~~~G~~~~~~~~~~-~~~l~~~~~~  149 (221)
T d1fuja_          71 QHFSVAQVFLNNYDAENKLNDILLIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPP-AQVLQELNVT  149 (221)
T ss_dssp             EEEEEEEEEECCCBTTTTBCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSCSSSCB-CSBCEEEEEE
T ss_pred             eeeeeeeEEEeeecCCCCccEEEEEEccccccccceEEEEEecccccccCCCceEEEeccccccccccc-Cccceeeeee
Confidence            4567889999999999999999999999999999999999999776543 6778889999987655432 33333332  


Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC--CCceEEEEeecccCc
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL--VGKSATVAGWGRTRH  126 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~  126 (132)
                      +.+..|...... ......-...|.++.+.++  .+...+|.+||...+
T Consensus       150 ~~~~~~~~~~~~-~~~~~~~~~~c~gd~G~pl~~~~~l~Gi~s~~~~gc  197 (221)
T d1fuja_         150 VVTFFCRPHNIC-TFVPRRKAGICFGDSGGPLICDGIIQGIDSFVIWGC  197 (221)
T ss_dssp             EECTTCCTTEEE-EECSSSSCBCCTTCTTCEEEETTEEEEEEEECSSST
T ss_pred             eeeeccccccce-eccccCCCceeCCccCCCEEEeCEEEEEEEEEECCC
Confidence            222222110000 0112333468889988877  688999999987654

>d3rp2a_ b.47.1.2 (A:) Chymase II (mast cell proteinase II) {Rat (Rattus rattus) [TaxId: 10117]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase II (mast cell proteinase II)
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.54  E-value=7.4e-15  Score=90.64  Aligned_cols=124  Identities=19%  Similarity=0.300  Sum_probs=89.0

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +...|.++++||+|+.....+|||||+|+.++.|+++++|+||+...... .+..+.+.|||....... ....+++.. 
T Consensus        68 ~~~~v~~~~~~~~~~~~~~~~diall~L~~~v~~~~~~~p~~l~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~l~~~~~  146 (224)
T d3rp2a_          68 QKIKVEKQIIHESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTGVRDP-TSYTLREVEL  146 (224)
T ss_dssp             EEEEEEEEEECTTCCSSSCCSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSEEETTEE-ECSBCEEEEE
T ss_pred             eeeeEEEEEecccccccccccceeeeeecceeEeccccceEEecccccccCCCcEEEEeeeeeeecCCC-ccceeeEEEE
Confidence            45778999999999999999999999999999999999999998765433 677888899998766543 234455544 


Q ss_pred             --ccCCeEEEEeccc----eee--ccCeeeeecCCCCCCC--CCceEEEEeecccCc
Q psy15292         80 --ISNDVALIKIDKD----VVF--KQHIIPVCLPDQTVKL--VGKSATVAGWGRTRH  126 (132)
Q Consensus        80 --~~~d~c~~~~~~~----~~~--~~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~  126 (132)
                        ++++.|...+...    +..  .......|.++.+.++  .+...+|..||....
T Consensus       147 ~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~c~~d~G~Pl~~~~~l~Gi~S~g~~~~  203 (224)
T d3rp2a_         147 RIMDEKACVDYRYYEYKFQVCVGSPTTLRAAFMGDSGGPLLCAGVAHGIVSYGHPDA  203 (224)
T ss_dssp             EEECGGGTTTTTCCCTTTEEEECCTTSCCBCCTTTTTCEEEETTEEEEEEEECCTTC
T ss_pred             EccCHHHhhhcccccccceeeeccCcccccCcCCCcCCeEEEcCEEEEEEEECCCCC
Confidence              6777775322111    111  1122245667776666  678889999987554

>d1op0a_ b.47.1.2 (A:) Venom serine protease {Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Venom serine protease
species: Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]

Probab=99.54  E-value=1.1e-14  Score=90.32  Aligned_cols=121  Identities=20%  Similarity=0.322  Sum_probs=84.3

Q ss_pred             eeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee---cc
Q psy15292          5 NTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS---IS   81 (132)
Q Consensus         5 ~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~---~~   81 (132)
                      .....+.|+.|......+||||++|++++.++++++|+|||..... .+..+.+.||+............++...   ++
T Consensus        68 ~~~~~~~~~~~~~~~~~~DiaLl~L~~~v~~~~~i~picl~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  146 (234)
T d1op0a_          68 PKEKFICPNKNNNEVLDKDIMLIKLDKPISNSKHIAPLSLPSSPPS-VGSVCRIMGWGSITPVKETFPDVPYCANINLLD  146 (234)
T ss_dssp             EEEEEECTTCCTTCTTSSCCEEEEESSCCCCBTTBCCCCCCSSCCC-TTCEEEEEESSCSSSSSCCCCSSCEEEEEEEEC
T ss_pred             eeeeccccccccccccchhhhhhhcCCceeccceeecccccccCcc-cceEEEEeeeccccccccccccccccccceEec
Confidence            3456778899999999999999999999999999999999976554 6888999999876655444445555443   55


Q ss_pred             CCeEEEEecccee--------eccCeeeeecCCCCCCC--CCceEEEEeecccCc
Q psy15292         82 NDVALIKIDKDVV--------FKQHIIPVCLPDQTVKL--VGKSATVAGWGRTRH  126 (132)
Q Consensus        82 ~d~c~~~~~~~~~--------~~~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~  126 (132)
                      ++.|.........        ........|.++.+.++  .+...+|..||...+
T Consensus       147 ~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~Pl~~~~~l~Gi~S~g~~~c  201 (234)
T d1op0a_         147 HAVCQAGYPELLAEYRTLCAGIVQGGKDTCGGDSGGPLICNGQFQGIVSYGAHPC  201 (234)
T ss_dssp             HHHHHHHCTTCCTTSCEEEEECTTCCCBCCTTCTTCEEEETTEEEEEEEECCSST
T ss_pred             hHHhcccccCcceeeeeeeecccccccccccCCCCceEEEcCEEEEEEEEcCCCC
Confidence            5555443322111        11222345666666666  577888888886544

>d1eq9a_ b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Red fire ant (Solenopsis invicta) [TaxId: 13686]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Red fire ant (Solenopsis invicta) [TaxId: 13686]

Probab=99.53  E-value=1.1e-14  Score=89.54  Aligned_cols=123  Identities=19%  Similarity=0.294  Sum_probs=86.0

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceee--e
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYV--S   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~--~   79 (132)
                      +...|.++++||+|......+||||++|.+++.+++.++|+||+.......+..+++.||+.+..... ....++..  .
T Consensus        66 ~~~~v~~~~~h~~y~~~~~~~diAll~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~  144 (222)
T d1eq9a_          66 DVYDVEDAVVNKNYDDFLLRNDVALVHLTNPIKFNDLVQPIKLSTNDEDLESNPCTLTGWGSTRLGGN-TPNALQEIELI  144 (222)
T ss_dssp             EEEEEEEEEECTTCBTTTTBCCCEEEEESSCCCCBTTBCCCEECSCCTTCTTSEEEEEECCCSSTTCC-CCSBCEEEEEE
T ss_pred             ceeeeeeEEEeecccccccccceehhhccCCcccccccccccccccccccccceeEEeeeeeecCCCC-CCccceEEEEE
Confidence            46789999999999999999999999999999999999999998776655677899999987765533 22333322  2


Q ss_pred             -ccCCeEEEEeccc----e-eeccCeeeeecCCCCCCC--CCceEEEEeecccC
Q psy15292         80 -ISNDVALIKIDKD----V-VFKQHIIPVCLPDQTVKL--VGKSATVAGWGRTR  125 (132)
Q Consensus        80 -~~~d~c~~~~~~~----~-~~~~~v~~icl~~~~~~~--~g~~~~v~gwg~~~  125 (132)
                       ++++.|.......    + .........|..+.+.++  .+..++|..||...
T Consensus       145 ~~~~~~c~~~~~~~~~~~~c~~~~~~~~~c~~d~G~pl~~~~~L~GI~s~~~~c  198 (222)
T d1eq9a_         145 VHPQKQCERDQWRVIDSHICTLTKRGEGACHGDSGGPLVANGAQIGIVSFGSPC  198 (222)
T ss_dssp             EECHHHHHHHSSSCCTTEEEECCCTTCBCCTTCTTCEEEETTEEEEEEEECSTT
T ss_pred             EechHHhccccccccCcceEeccCCCCCccccCCcCCEEEcCEEEEEEEECCCC
Confidence             4444443221110    0 001112246777777666  68899999998653

>d2f91a1 b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]

Probab=99.53  E-value=1e-14  Score=90.63  Aligned_cols=121  Identities=20%  Similarity=0.407  Sum_probs=85.4

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      +...|.++++||+|+.....+|||||+|..++.++..+.++|++..... .+..+...|||....... ....+++..  
T Consensus        75 ~~~~v~~i~~h~~y~~~~~~~diAll~l~~~v~~~~~~~~i~~~~~~~~-~~~~~~~~g~g~~~~~~~-~~~~l~~~~~~  152 (237)
T d2f91a1          75 QIITVSKIILHENFDYNLLDNDISLLKLSGSLTFNDNVAPIALPEQGHT-ATGDVIVTGWGTTSEGGN-TPDVLQKVTVP  152 (237)
T ss_dssp             EEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCCTTCC-CCSEEEEEESCCSSTTCC-CCSBCEEEEEE
T ss_pred             eeeeEEEEEEccccCCCccccceeeeccccccccCCceeeeeccccCcc-cccceeeccccccCCCCc-CCchheEEEEE
Confidence            4678999999999999999999999999999999999999999877654 567888999998765543 344455544  


Q ss_pred             -ccCCeEEEEeccceee--------ccCeeeeecCCCCCCC--CCc----eEEEEeeccc
Q psy15292         80 -ISNDVALIKIDKDVVF--------KQHIIPVCLPDQTVKL--VGK----SATVAGWGRT  124 (132)
Q Consensus        80 -~~~d~c~~~~~~~~~~--------~~~v~~icl~~~~~~~--~g~----~~~v~gwg~~  124 (132)
                       +.++.|...+......        .+.....|-++.+.++  .+.    .++|..||..
T Consensus       153 ~~~~~~C~~~~~~~~~~~~~~c~~~~~~~~~~~~gdsG~Pl~~~~~~~~~L~Gi~S~g~~  212 (237)
T d2f91a1         153 LVSDEDCRADYGADEILDSMICAGVPEGGKDSCQGDSGGPLAASDTGSTYLAGIVSWGYG  212 (237)
T ss_dssp             EECHHHHHHHHCTTTSCTTEEEECCTTCCCBCCTTCTTCEEEECTTSSCEEEEEEEEESS
T ss_pred             EeCHHHHhhhccCCcccCceeEeecCCCccccccCCCCCeEEEecCCeEEEEEEEEeCCC
Confidence             5566665433222111        1222345666666655  333    7788888754

>d1orfa_ b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=2.2e-14  Score=88.83  Aligned_cols=122  Identities=23%  Similarity=0.326  Sum_probs=87.6

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +...+..++.||+|......+|||||+|..++.+.+.++|+|++...... .+..+.++|||....... ....+++.. 
T Consensus        65 ~~~~~~~i~~hp~y~~~~~~~diAll~l~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~g~g~~~~~~~-~~~~l~~~~~  143 (232)
T d1orfa_          65 QIMLVKKEFPYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHNSAS-WSDTLREVEI  143 (232)
T ss_dssp             EEECEEEEEECTTCCTTTCTTCCEEEEESSCCCCSSSSCCCCCCSSCCCCCTTCEEEEEESSCSSSSSC-CCSBCEEEEE
T ss_pred             ccceEEEEEecccccccccCcceeEeeeccceeeeeeEeeeeecccccccccCceeeeccccccCCccc-CChhheEEEe
Confidence            35677889999999999999999999999999999999999998655433 678899999998766543 345566544 


Q ss_pred             --ccCCeEEEEeccc--eeec-c--------CeeeeecCCCCCCC--CCceEEEEeeccc
Q psy15292         80 --ISNDVALIKIDKD--VVFK-Q--------HIIPVCLPDQTVKL--VGKSATVAGWGRT  124 (132)
Q Consensus        80 --~~~d~c~~~~~~~--~~~~-~--------~v~~icl~~~~~~~--~g~~~~v~gwg~~  124 (132)
                        ++++.|..++...  .... +        .....|.++.+.++  .+...+|..||..
T Consensus       144 ~~~~~~~C~~~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsG~Pl~~~~~l~GI~S~g~~  203 (232)
T d1orfa_         144 TIIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSCNGDSGSPLLCEGVFRGVTSFGLE  203 (232)
T ss_dssp             EEECHHHHTSTTTTTTTTCCCTTEEEEECSSCCCBCCTTCTTCEEEETTEEEEEEEECCT
T ss_pred             ecCCHHHHhhhhhcccCccccCceEEeccCCCCcccccccCCCeEEEcCEEEEEEEEECC
Confidence              6667775432211  0111 1        11235667777766  6888889999854

>d2z7fe1 b.47.1.2 (E:16-243) Elastase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=5.7e-14  Score=86.07  Aligned_cols=123  Identities=17%  Similarity=0.292  Sum_probs=89.0

Q ss_pred             EEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee--
Q psy15292          3 KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         3 ~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      .+.+..++.|++|+.....+||||++|..++.+++.++|+|+|...... ....+.+.||+....... ....++...  
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~diall~l~~~~~~~~~~~pi~l~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~l~~~~~~  146 (218)
T d2z7fe1          68 QVFAVQRIFENGYDPVNLLNDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRG-IASVLQELNVT  146 (218)
T ss_dssp             EEEEEEEEEESCCBTTTTBSCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCEEEEEESSBCSSSCC-BCSBCEEEEEE
T ss_pred             eeeeeeeEeeeccccccccceEEEeeccccceeeeeeeeeeeccCccccCCCcEEEEeccceeecccc-cccceeEEEec
Confidence            4566788899999999999999999999999999999999998766543 566788899998766543 344566544  


Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC--CCceEEEEeecccCcC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL--VGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~~  127 (132)
                      +.++.|...... ..........|.++++.++  .+..++|..||...+.
T Consensus       147 ~~~~~c~~~~~~-~~~~~~~~~~C~gdsG~Pl~~~~~l~GI~s~~~~~c~  195 (218)
T d2z7fe1         147 VVTSLCRRSNVC-TLVRGRQAGVCFGDSGSPLVCNGLIHGIASFVRGGCA  195 (218)
T ss_dssp             EECTTCCTTSEE-EECTTSCCBCCTTCTTCEEEETTEEEEEEEEESSSTT
T ss_pred             ccccccceeeee-eeecCcccCccccccCCCEEECCEEEEEEEEecCCCC
Confidence            444445322111 1122333457999998877  7899999999866543

>d1t32a1 b.47.1.2 (A:16-244) Cathepsin G {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Cathepsin G
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=2e-14  Score=88.56  Aligned_cols=123  Identities=22%  Similarity=0.370  Sum_probs=90.5

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +...|.+++.||+|......+||||++|..++.+.+.++|+|||...... .+..+...|||.......  ...+++.. 
T Consensus        67 ~~~~v~~i~~~~~~~~~~~~~diaL~~l~~~~~~~~~~~pi~l~~~~~~~~~~~~~~~~g~g~~~~~~~--~~~l~~~~~  144 (224)
T d1t32a1          67 QHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMRRG--TDTLREVQL  144 (224)
T ss_dssp             EEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESCCSSSSCC--CSBCEEEEE
T ss_pred             eeecceeEEEeecccccccccceeEEeeccccccCcccCccccccccccCCCCCEEEEecccccccCCC--cceeeeeee
Confidence            45788999999999999999999999999999999999999998766543 677788899997655433  33455444 


Q ss_pred             --ccCCeEEEEeccce----e-e--ccCeeeeecCCCCCCC--CCceEEEEeecccCc
Q psy15292         80 --ISNDVALIKIDKDV----V-F--KQHIIPVCLPDQTVKL--VGKSATVAGWGRTRH  126 (132)
Q Consensus        80 --~~~d~c~~~~~~~~----~-~--~~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~  126 (132)
                        ++++.|...+....    . .  .......|.++++.++  .+..++|..||....
T Consensus       145 ~~~~~~~C~~~~~~~~~~~~~c~~~~~~~~~~c~gdsGgPl~~~~~l~Gi~S~g~~~~  202 (224)
T d1t32a1         145 RVQRDRQCLRIFGSYDPRRQICVGDRRERKAAFKGDSGGPLLCNNVAHGIVSYGKSSG  202 (224)
T ss_dssp             EBCCHHHHHHHSTTCCTTTEEEECCTTSSCBCCTTCTTCEEEETTEEEEEEEECCTTC
T ss_pred             eecCHHHHHhhcCcccccccceeecccccccccccCcCCeEEEcCEEEEEEEEcCCCC
Confidence              67777765443211    0 0  1223347888887777  788999999986543

>d1hj9a_ b.47.1.2 (A:) Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.51  E-value=2.1e-14  Score=88.34  Aligned_cols=123  Identities=20%  Similarity=0.408  Sum_probs=88.6

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      +...+..+++||.|+.....+|||||+|..++.+.+.+.|+|++..... .+..+.+.||+.+..........++...  
T Consensus        63 ~~~~~~~~~~~~~~~~~~~~~diAll~l~~~~~~~~~~~p~cl~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~  141 (223)
T d1hj9a_          63 QFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGNTKSSGTSYPDVLKCLKAP  141 (223)
T ss_dssp             EEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCSSCCC-TTCEEEEEESSCCCSSSCCCCSSCEEEEEE
T ss_pred             eeeceeeEEeccccccccccchhhhhhcccceeeeeeeecccccccccc-ccceEEEEeeccccCCCCCCCccceEEEEe
Confidence            4567888999999999999999999999999999999999999876654 5677889999887655444445555544  


Q ss_pred             -ccCCeEEEEeccceee-------ccCeeeeecCCCCCCC--CCceEEEEeecccC
Q psy15292         80 -ISNDVALIKIDKDVVF-------KQHIIPVCLPDQTVKL--VGKSATVAGWGRTR  125 (132)
Q Consensus        80 -~~~d~c~~~~~~~~~~-------~~~v~~icl~~~~~~~--~g~~~~v~gwg~~~  125 (132)
                       ++++.|...+...+.-       .......|.++.+.++  .+..++|..||...
T Consensus       142 ~~~~~~C~~~~~~~~~~~~~c~~~~~~~~~~~~gd~g~pl~~~~~L~Gi~S~g~~c  197 (223)
T d1hj9a_         142 ILSDSSCKSAYPGQITSNMFCAYGLEGKGDSCQGDSGGPVVCSGKLQGIVSWGSGC  197 (223)
T ss_dssp             CCCHHHHHHHSTTTCCTTEEECCCCCCCCCCCTTCTTCEEEETTEEEEEEEECSCC
T ss_pred             ecCHHHHHHHhCCcccccceEEeecCCCcccccCCCCceeEEeCEEEEEEEEcCCC
Confidence             6667776554332211       1122235666666555  57788898888643

>d1npma_ b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Neuropsin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.51  E-value=1.7e-14  Score=88.95  Aligned_cols=122  Identities=20%  Similarity=0.348  Sum_probs=85.4

Q ss_pred             EeeeEEEeCCC---CCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee-
Q psy15292          4 LNTRQSFVHPQ---YSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         4 ~~v~~~~~h~~---y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      ..+..+..||.   |+.....+||||++|.+++.+.+.++++|+|..... .+..+.++|||.........+..++... 
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~dIAll~L~~~~~~~~~~~~i~l~~~~~~-~~~~~~~~g~g~~~~~~~~~~~~l~~~~~  144 (225)
T d1npma_          66 IQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSANLGDKVKPVQLANLCPK-VGQKCIISGWGTVTSPQENFPNTLNCAEV  144 (225)
T ss_dssp             ECEEEEEECTTCCSSCTTCCTTCCEEEEESSCCCCSSSSCCCEECSSCCC-TTCEEEEEESSCSSSSSCCCCSBCEEEEE
T ss_pred             eeeeeeEEEEeeeccCcccchhhhhhhhcccccccccccccccccccccc-CCceEEEeccceecCCCCCCCCccEEEEE
Confidence            44556666664   455678999999999999999999999999977654 6778999999987655544455566544 


Q ss_pred             --ccCCeEEEEecccee------eccCeeeeecCCCCCCC--CCceEEEEeecccCc
Q psy15292         80 --ISNDVALIKIDKDVV------FKQHIIPVCLPDQTVKL--VGKSATVAGWGRTRH  126 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~------~~~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~  126 (132)
                        ++++.|...+...+.      .......+|.++.+.++  .....+|..||...+
T Consensus       145 ~~~~~~~C~~~~~~~~~~~~~C~~~~~~~~~c~gd~G~pl~~~~~l~Gi~S~g~~~c  201 (225)
T d1npma_         145 KIYSQNKCERAYPGKITEGMVCAGSSNGADTCQGDSGGPLVCDGMLQGITSWGSDPC  201 (225)
T ss_dssp             EECCHHHHHHHSTTTCCTTEEEEECTTCCBCCTTCTTCEEEETTEEEEEEEECCSSS
T ss_pred             EEecHHHHhhhccCCcCCCEEEecCCCCCccccCCCCceEEEccEEEEEEEECCCCC
Confidence              667777654433211      01112346888887777  677888988886543

>d1pytd_ b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.51  E-value=2.5e-14  Score=89.56  Aligned_cols=123  Identities=22%  Similarity=0.349  Sum_probs=84.3

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCccccccee-ee
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTY-VS   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~-~~   79 (132)
                      +...|.++++||+|+.....+||||++|..|+.+++.++|+||+...... .+..+.+.||+.+..........+.. ..
T Consensus        84 ~~~~v~~i~~h~~y~~~~~~~diali~l~~pi~~~~~~~pi~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  163 (251)
T d1pytd_          84 LYVGVDTIFVHEKWNSFLVRNDIALIKLAETVELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTNGPIAAELQQGLQP  163 (251)
T ss_dssp             EEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEECBCCCSSCCSCCCSBCBCCEEE
T ss_pred             eEEeEEEEEEeeeecccccCCceeeeecCCCcccCceeEEEEeeccccCCCCceeEEEecCccccCCCcccceeceeecc
Confidence            46789999999999999999999999999999999999999998776543 67778899999876654432222221 11


Q ss_pred             -ccCCeEEEEeccceeec--------cCeeeeecCCCCCCC--CC----ceEEEEeeccc
Q psy15292         80 -ISNDVALIKIDKDVVFK--------QHIIPVCLPDQTVKL--VG----KSATVAGWGRT  124 (132)
Q Consensus        80 -~~~d~c~~~~~~~~~~~--------~~v~~icl~~~~~~~--~g----~~~~v~gwg~~  124 (132)
                       +.++.|...+.......        ......|.++.+.++  .+    ...+|..||..
T Consensus       164 ~~~~~~C~~~~~~~~~~~~~~~c~~~~~~~~~c~gd~G~Pl~~~~~~~~~L~Gi~S~~~~  223 (251)
T d1pytd_         164 VVDYATCSQRDWWGTTVKETMVCAGGDGVISACNGDSGGPLNCQADGQWDVRGIVSFGSG  223 (251)
T ss_dssp             CBCHHHHTSTTTTTTTCCTTEEEECCSCSSCCCCSCTTCEEEEESSSSEEEEEEEEECCS
T ss_pred             ccCHHHHhhhhcccccccCceEEeccCCCCccccCCCCCceEEeeCCEEEEEEEEEECCC
Confidence             55566654322211111        112246777877766  33    36777778754

>d1fxya_ b.47.1.2 (A:) Coagulation factor Xa-trypsin chimera {Synthetic, based on Homo sapiens sequence}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa-trypsin chimera
species: Synthetic, based on Homo sapiens sequence

Probab=99.51  E-value=1.5e-14  Score=89.42  Aligned_cols=122  Identities=16%  Similarity=0.349  Sum_probs=89.5

Q ss_pred             EEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee---
Q psy15292          3 KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS---   79 (132)
Q Consensus         3 ~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~---   79 (132)
                      ...+..++.||.|......+||||++|+.++.++++++|+|||..... .+..+.+.|||.+..........+++..   
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~diAl~~l~~~~~~~~~~~picL~~~~~~-~~~~~~~~gwg~~~~~~~~~~~~l~~~~~~~  146 (228)
T d1fxya_          68 VHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPASLPTAPPA-TGTKCLISGWGNTASSGADYPDELQCLDAPV  146 (228)
T ss_dssp             EEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCCCCSSCCC-TTCEEEEEESSCCCSSSCCCCSSCEEEEEEB
T ss_pred             eeeeeccceeeeeeccccccceeehhcccccccccccccccccccccc-cccEEEEEecccccCCCCCCCchhEEEEEEE
Confidence            456677889999998899999999999999999999999999977654 5778999999987766554455666554   


Q ss_pred             ccCCeEEEEecccee-------eccCeeeeecCCCCCCC--CCceEEEEeecccC
Q psy15292         80 ISNDVALIKIDKDVV-------FKQHIIPVCLPDQTVKL--VGKSATVAGWGRTR  125 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~-------~~~~v~~icl~~~~~~~--~g~~~~v~gwg~~~  125 (132)
                      ++++.|...+...+.       ....-...|.++.+.++  .+...+|..||...
T Consensus       147 ~~~~~C~~~~~~~~~~~~~c~~~~~~~~~~~~gd~G~Pl~~~~~l~Gi~s~g~~~  201 (228)
T d1fxya_         147 LSQAKCEASYPGKITSNMFCVGFLEGGKDSCQGDSGGPVVCNGQLQGVVSWGDGC  201 (228)
T ss_dssp             CCHHHHHHHSTTTCCTTEEEESCTTCSCBCCTTCTTCEEEETTEEEEEEEECSSS
T ss_pred             eCHHHHhhhcCCcccceeeEeecCCCCcccccCccCccEEEeCEEEEEEEECCCC
Confidence            777777654432211       01222246666776666  67888999998754

>d1nn6a_ b.47.1.2 (A:) Chymase (mast cell protease I) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase (mast cell protease I)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=8.9e-14  Score=85.67  Aligned_cols=124  Identities=23%  Similarity=0.341  Sum_probs=89.3

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +...+.+++.||+|+.....+|||||+|..++.++..++|+|++...... .+..+...||+.+..... ....+++.. 
T Consensus        66 ~~~~~~~~~~~p~~~~~~~~~diall~l~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~  144 (224)
T d1nn6a_          66 QKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKP-GSDTLQEVKL  144 (224)
T ss_dssp             EEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCCSSCCCCCCCSCCCCCCTTCEEEEEECCCCSSSCC-CCSBCEEEEE
T ss_pred             cceeEEEEEEeecccccccccchhhhcccCCcccccccccccccccccccCCCceeeeccccccccCCC-ccccceEEEE
Confidence            45678899999999999999999999999999999999999998665443 677888899987655443 244455544 


Q ss_pred             --ccCCeEEEEeccc----e--eeccCeeeeecCCCCCCC--CCceEEEEeecccCc
Q psy15292         80 --ISNDVALIKIDKD----V--VFKQHIIPVCLPDQTVKL--VGKSATVAGWGRTRH  126 (132)
Q Consensus        80 --~~~d~c~~~~~~~----~--~~~~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~  126 (132)
                        ++++.|...+...    +  .-.......|.++++.++  .+...+|..||....
T Consensus       145 ~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~c~gDsG~PL~~~~~l~GI~s~g~~~~  201 (224)
T d1nn6a_         145 RLMDPQACSHFRDFDHNLQLCVGNPRKTKSAFKGDSGGPLLCAGVAQGIVSYGRSDA  201 (224)
T ss_dssp             EBCCGGGGTTSTTCCTTTEEEECCTTTC--CCCCCTTCEEEETTEEEEEEEECCTTC
T ss_pred             EecCHHHHhhhcccccceeeeccCccccccccCCCccceEEECCEEEEEEEECCCCC
Confidence              6677774322111    0  112223357888888777  789999999996543

>d1a7sa_ b.47.1.2 (A:) Heparin binding protein, HBP {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Heparin binding protein, HBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=8e-14  Score=85.84  Aligned_cols=122  Identities=22%  Similarity=0.317  Sum_probs=88.3

Q ss_pred             EEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee--
Q psy15292          3 KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         3 ~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      ...+..++.|+.|......+|||||+|++++.+...++++|++...... .+..+.+.|||....... ....+++..  
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~DIAll~L~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~l~~~~~~  147 (225)
T d1a7sa_          69 QTFSISSMSENGYDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGR-LSRFPRFVNVT  147 (225)
T ss_dssp             EEEEEEEEECSSCBTTTTBSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESCCSSTTCC-CCSSCEEEEEE
T ss_pred             ceeeeeeeeeeeccccccccccchhhcCCcccccccceeEEeeccccccCCCceeEeccccccccccc-cccceeEEEEE
Confidence            3456778899999999999999999999999999999999997655443 678899999998765543 234444433  


Q ss_pred             -ccCCeEEEEeccceeeccCeeeeecCCCCCCC--CCceEEEEeecccCc
Q psy15292         80 -ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL--VGKSATVAGWGRTRH  126 (132)
Q Consensus        80 -~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~  126 (132)
                       ++++.|........ ....-...|.++.+.++  .+...+|..||....
T Consensus       148 ~~~~~~C~~~~~~~~-~~~~~~~~c~gdsG~Pl~~~~~l~Gi~S~~~~~c  196 (225)
T d1a7sa_         148 VTPEDQCRPNNVCTG-VLTRRGGICNGDGGTPLVCEGLAHGVASFSLGPC  196 (225)
T ss_dssp             ECCGGGSCTTEEEEE-CSSSSCBCCTTCTTCEEEETTEEEEEEEEECSST
T ss_pred             Eeehhhcccccceee-ecccccccccCCCCCCEEEeCEEEEEEEECCCCC
Confidence             77777754322111 11222347788887777  688999999987554

>d1mzaa_ b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme K
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=9.7e-14  Score=86.24  Aligned_cols=123  Identities=18%  Similarity=0.222  Sum_probs=86.5

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      +.+.+.+++.||.|......+||||++|..++.+++.++|+||+..........+.+.|||............++...  
T Consensus        71 ~~~~~~~i~~h~~~~~~~~~~diAll~l~~~~~~~~~~~picL~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~l~~~~~~  150 (240)
T d1mzaa_          71 QTLEIKKFIPFSRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDSLRPSDTLREVTVT  150 (240)
T ss_dssp             EEEEEEEEEECCCSSCSSSSSCCEEEEESSCCCCBTTBCCCCBCSSCCCCTTCEEEEEECCCSSTTCSSCCSBCEEEEEE
T ss_pred             eeEeeeeeeeeccccccccCcceEEEeecceeeeeeccccccccccccccceeeEEEEEeccccCCcCcCCcccEEEEEE
Confidence            356788999999999999999999999999999999999999987766556667888899876554333344444433  


Q ss_pred             -ccCCeEEEEecc---cee--------eccCeeeeecCCCCCCC--CCceEEEEeeccc
Q psy15292         80 -ISNDVALIKIDK---DVV--------FKQHIIPVCLPDQTVKL--VGKSATVAGWGRT  124 (132)
Q Consensus        80 -~~~d~c~~~~~~---~~~--------~~~~v~~icl~~~~~~~--~g~~~~v~gwg~~  124 (132)
                       +.++.|......   .+.        ........|.++++.++  .+...+|..||..
T Consensus       151 ~~~~~~C~~~~~~~~~~~~~~~~~c~~~~~~~~~~C~gDsGgPl~~~~~l~Gi~S~g~~  209 (240)
T d1mzaa_         151 VLSRKLCNSQSYYNGDPFITKDMVCAGDAKGQKDSCKGDAGGPLICKGVFHAIVSGGHE  209 (240)
T ss_dssp             ECCHHHHTSTTTTTTTTCCCTTEEEEECTTSCCCCCTTCTTCEEEETTEEEEEECSSCC
T ss_pred             EecHHHhhhhhhccCCcccccceEEeccCCCCccCccCCCCCeEEECCEEEEEEEeCCC
Confidence             555555432110   010        11222346778887777  6888889888863

>d2fpza1 b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: beta-Tryptase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=3.6e-14  Score=88.43  Aligned_cols=124  Identities=23%  Similarity=0.355  Sum_probs=84.6

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCc-ccccceeee
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSL-SSAIPTYVS   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~-~~~~l~~~~   79 (132)
                      +.+.|.++++||+|......+|||||+|..++.++++++++|||...... .+..+.+.+||........ ....+++..
T Consensus        70 ~~~~i~~i~~hp~~~~~~~~~diAli~L~~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~  149 (243)
T d2fpza1          70 QLLPVSRIIVHPQFYTAQIGADIALLELEEPVKVSSHVHTVTLPPASETFPPGMPCWVTGWGDVDNDERLPPPFPLKQVK  149 (243)
T ss_dssp             CCEEEEEEEECTTCSCTTTSCCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCCCTTCBCEEEE
T ss_pred             EEEeeeeeeccccccccccccchhhhcccCccccceeEEEeecCchhhccCCCceeEEEecccccCCCcCCCCcEeEEEE
Confidence            56789999999999999999999999999999999999999998765443 5677888999876655332 233444433


Q ss_pred             ---ccCCeEEEEecccee--------------eccCeeeeecCCCCCCC--CCc----eEEEEeecccC
Q psy15292         80 ---ISNDVALIKIDKDVV--------------FKQHIIPVCLPDQTVKL--VGK----SATVAGWGRTR  125 (132)
Q Consensus        80 ---~~~d~c~~~~~~~~~--------------~~~~v~~icl~~~~~~~--~g~----~~~v~gwg~~~  125 (132)
                         ++++.|...+.....              ..+.....|.++++.++  .+.    ..+|..||...
T Consensus       150 ~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgpl~~~~~~~~~L~Gi~s~~~~~  218 (243)
T d2fpza1         150 VPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAGNTRRDSCQGDSGGPLVCKVNGTWLQAGVVSWGEGC  218 (243)
T ss_dssp             EEEECHHHHHHHHHTTBCSCTTSCSSCTTEEEECCSSSBCCTTCTTCEEEEEETTEEEEEEEEEECSSS
T ss_pred             EeecCHHHhhhhhhcccccCCccceeeeeeEecCCCCCCCccCCCCCeEEEeeCCEEEEEEEEEECCCC
Confidence               666777544321111              11222346777776665  222    56677776543

>d1eaxa_ b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Matriptase MTSP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=7.6e-14  Score=86.89  Aligned_cols=122  Identities=25%  Similarity=0.462  Sum_probs=82.5

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.++++||+|+.....+|||||+|..++.+...++++||+...... .+..+...||+....... ....+++.. 
T Consensus        76 ~~~~v~~i~~Hp~y~~~~~~~diAll~L~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~l~~~~~  154 (241)
T d1eaxa_          76 QERRLKRIISHPFFNDFTFDYDIALLELEKPAEYSSMVRPICLPDASHVFPAGKAIWVTGWGHTQYGGT-GALILQKGEI  154 (241)
T ss_dssp             EEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSBSSTTSC-BCSBCEEEEE
T ss_pred             EEEEEEEEEECCcccccccCCcccccccCCceecCcccceeeccccccccccceeEEEeccCCcccccc-ccccceEEEE
Confidence            57889999999999999999999999999999999999999998655433 567788899987655433 344455544 


Q ss_pred             --ccCCeEEEEecccee-------eccCeeeeecCCCCCCC---C--C--ceEEEEeeccc
Q psy15292         80 --ISNDVALIKIDKDVV-------FKQHIIPVCLPDQTVKL---V--G--KSATVAGWGRT  124 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~-------~~~~v~~icl~~~~~~~---~--g--~~~~v~gwg~~  124 (132)
                        ..++.|...+...+.       ........|.++.+.++   .  |  ...+|..||..
T Consensus       155 ~~~~~~~C~~~~~~~~~~~~~c~~~~~~~~~~c~gd~G~pl~~~~~~g~~~L~Gi~s~~~~  215 (241)
T d1eaxa_         155 RVINQTTCENLLPQQITPRMMCVGFLSGGVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDG  215 (241)
T ss_dssp             EECCHHHHHHHSTTTCCTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSS
T ss_pred             EEeCHHHHHHHhCccccCccceeccCCCCcccccCcccceeEEEcCCCeEEEEEEEEECCC
Confidence              555666544433211       01111235666666554   1  1  15567667654

>d1q3xa1 b.47.1.2 (A:445-686) Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=7.7e-14  Score=86.84  Aligned_cols=125  Identities=24%  Similarity=0.448  Sum_probs=80.6

Q ss_pred             eEEeeeEEEeCCCCCCCC-CCCceEEEEeCCCeeeCCCeeeeeecCCCCcc---cCCcEEEeccCccccCCCccccccee
Q psy15292          2 FKLNTRQSFVHPQYSPSD-FRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL---VGKSATVAGWGRTRHASSLSSAIPTY   77 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~-~~~diall~l~~~~~~~~~~~~~cl~~~~~~~---~g~~~~~~GwG~~~~~~~~~~~~l~~   77 (132)
                      +.+.+.++++||+|+... +.+|||||+|++++.+++++.|+|++......   .+......||+....+..  ...++.
T Consensus        66 ~~~~v~~i~~hp~y~~~~~~~~DiAll~L~~~~~~~~~v~pic~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~l~~  143 (242)
T d1q3xa1          66 TQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFL--ARNLMY  143 (242)
T ss_dssp             EEEEEEEEEECTTCCTTSCCTTCCEEEEESSCCCCBTTBCCCBCCCGGGGGGSSTTCEEEEEESSCCTTSSC--CSBCEE
T ss_pred             cccceeeeEEeeccccccccCccccccccCCCccccccEEEEeccccccccccccceeeeeeeccccccCcc--ccceee
Confidence            356788999999998765 68999999999999999999999997654322   455667788877655432  344444


Q ss_pred             ee---ccCCeEEEEecccee-------------eccCeeeeecCCCCCCC--C-C-----ceEEEEeecccCcCC
Q psy15292         78 VS---ISNDVALIKIDKDVV-------------FKQHIIPVCLPDQTVKL--V-G-----KSATVAGWGRTRHAG  128 (132)
Q Consensus        78 ~~---~~~d~c~~~~~~~~~-------------~~~~v~~icl~~~~~~~--~-g-----~~~~v~gwg~~~~~~  128 (132)
                      ..   +.++.|...+.....             ........|.++.+.++  . +     ...+|..||...++.
T Consensus       144 ~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~gdsGgpl~~~~~~~~~~~l~Gi~S~g~~~c~~  218 (242)
T d1q3xa1         144 VDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGE  218 (242)
T ss_dssp             EEEEEECHHHHHHHTSSTTSCTTCSCTTEEEECCSSCCSBCCTTCTTCEEEEEETTTTEEEEEEEEEECCSSTTC
T ss_pred             eeccccCHHHHHhhhhcccccCceeccceeeeeccCCCccccccccccceEEeeCCCCeEEEEEEEEeCCCCCCC
Confidence            33   556666543322111             11222235667766555  1 1     266777788755443

>d1sgfa_ b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: 7S NGF protease subunits
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.45  E-value=2.3e-14  Score=88.45  Aligned_cols=117  Identities=21%  Similarity=0.298  Sum_probs=69.5

Q ss_pred             EEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee---ccCCeE
Q psy15292          9 SFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS---ISNDVA   85 (132)
Q Consensus         9 ~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~---~~~d~c   85 (132)
                      +..|+.|+...+.+||||++|+.++.+++.++|+|||..... ....+...||+.+..........+++..   ++++.|
T Consensus        73 ~~~~~~~~~~~~~~Diall~L~~~v~~~~~v~pi~l~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~C  151 (228)
T d1sgfa_          73 LNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPK-LGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDC  151 (228)
T ss_dssp             C----CCTTCBCTTCCEEEEESSCCCCCSSCCCCCCCCSCCC-TTCEEEEC-------C---------CEEEEEECTHHH
T ss_pred             ecccCCCCccccccceeEEeeccccccCCceeeEecCccccc-cCcceEEEeeeeccCCccCCCCccEEEEEEEeCHHHh
Confidence            558899999999999999999999999999999999987664 5667889999886655444455555444   666667


Q ss_pred             EEEecccee-------eccCeeeeecCCCCCCC--CCceEEEEeecccCc
Q psy15292         86 LIKIDKDVV-------FKQHIIPVCLPDQTVKL--VGKSATVAGWGRTRH  126 (132)
Q Consensus        86 ~~~~~~~~~-------~~~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~  126 (132)
                      .........       -.......|.++.+.++  .+...+|..||...+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~G~pl~~~~~l~Gv~S~g~~~c  201 (228)
T d1sgfa_         152 DKAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLICDGILQGITSWGPEPC  201 (228)
T ss_dssp             HTTCSSBCCTTEEEEEECSSSEEECCCCTTCEEEETTEEEEEECCCCSSC
T ss_pred             hhhccCCcccceEEeccCCCCccccCCCcCCcEEEeCEEEEEEEECCCCC
Confidence            532221110       01112346777777666  688888999987544

>d1hj8a_ b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon (Salmo salar) [TaxId: 8030]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: North atlantic salmon (Salmo salar) [TaxId: 8030]

Probab=99.43  E-value=1.4e-13  Score=84.61  Aligned_cols=120  Identities=24%  Similarity=0.409  Sum_probs=86.2

Q ss_pred             EEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee---
Q psy15292          3 KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS---   79 (132)
Q Consensus         3 ~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~---   79 (132)
                      ...+.+++.|+.|......+||||++|..++.+++.++|+|||..... .+..+.+.|||....... ....+++..   
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~diALl~l~~~v~~~~~~~picl~~~~~~-~~~~~~~~g~~~~~~~~~-~~~~l~~~~~~~  141 (222)
T d1hj8a_          64 FISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSCAP-AGTMCTVSGWGNTMSSTA-DSNKLQCLNIPI  141 (222)
T ss_dssp             EEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCSSSCCCCBCCSSCCC-TTCEEEEEESSCCCCSSC-CTTBCEEEEEEB
T ss_pred             cccceEEEecccccccccCCcEEEEecccceeeeceeEEEECCCcCCC-CCceEEEEeccccccccc-cccccEEEEEEE
Confidence            345667889999999999999999999999999999999999976654 677889999998755433 344555544   


Q ss_pred             ccCCeEEEEeccce-----e--eccCeeeeecCCCCCCC--CCceEEEEeeccc
Q psy15292         80 ISNDVALIKIDKDV-----V--FKQHIIPVCLPDQTVKL--VGKSATVAGWGRT  124 (132)
Q Consensus        80 ~~~d~c~~~~~~~~-----~--~~~~v~~icl~~~~~~~--~g~~~~v~gwg~~  124 (132)
                      ++++.|...+...+     -  ..+.....|-++++.++  .+..++|..||.-
T Consensus       142 ~~~~~C~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgPl~~~~~l~Gi~S~g~~  195 (222)
T d1hj8a_         142 LSYSDCNNSYPGMITNAMFCAGYLEGGKDSCQGDSGGPVVCNGELQGVVSWGYG  195 (222)
T ss_dssp             CCHHHHHHHSTTCCCTTEEEESCTTSSCBCCTTCTTCEEEETTEEEEEEEECSS
T ss_pred             eCHHHHhhhcccccccceEEEccCCCCcccccCCcccEEEECCEEEEEEEEecC
Confidence            55566654332211     1  11222346778887776  7888999999864

>d1ao5a_ b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein-13
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.43  E-value=2.2e-13  Score=84.46  Aligned_cols=123  Identities=20%  Similarity=0.300  Sum_probs=82.1

Q ss_pred             EEeeeEEEeCCCCCC-----------CCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcc
Q psy15292          3 KLNTRQSFVHPQYSP-----------SDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLS   71 (132)
Q Consensus         3 ~~~v~~~~~h~~y~~-----------~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~   71 (132)
                      .+.+.+++.||+|+.           ..+.+|||||+|++++.+.+.++++|||..... .+..+.++|||.........
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiAll~L~~~i~~~~~~~~i~lp~~~~~-~~~~~~~~g~~~~~~~~~~~  143 (237)
T d1ao5a_          65 HRLVSKSFPHPGFNMSLLMLQTIPPGADFSDDLMLLRLSKPADITDVVKPIALPTKEPK-PGSKCLASGWGSITPTRWQK  143 (237)
T ss_dssp             ECCEEEEEECTTSCGGGGGCSSCCTTCCCTTCCEEEEESSCCCCCSSSCCCCCCCSCCC-TTCEEEEEESCCSSCC-CCC
T ss_pred             EEEEEEEeecccccccccccccccCccccccceeeeccCcccccccccceeccCCCCCc-ccceEEEeeeeeeccccccC
Confidence            456788899988864           234689999999999999999999999987654 56789999999765544333


Q ss_pred             cccceeee---ccCCeEEEEeccce----e---eccCeeeeecCCCCCCC--CCceEEEEeecccCc
Q psy15292         72 SAIPTYVS---ISNDVALIKIDKDV----V---FKQHIIPVCLPDQTVKL--VGKSATVAGWGRTRH  126 (132)
Q Consensus        72 ~~~l~~~~---~~~d~c~~~~~~~~----~---~~~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~  126 (132)
                      ...+....   ++...|.......+    .   ........|.++.+.++  .+...+|..||...+
T Consensus       144 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~c~gdsG~pl~~~~~l~Gi~S~g~~~c  210 (237)
T d1ao5a_         144 PDDLQCVFITLLPNENCAKVYLQKVTDVMLCAGEMGGGKDTCRDDSGGPLICDGILQGTTSYGPVPC  210 (237)
T ss_dssp             CSBCEEEEEEEECHHHHHHHCSSCCCTTEEEEECTTCSCBCCTTCTTCEEEETTEEEEEEEECCSST
T ss_pred             CccceeeEEEEEehHHhhhhhcCCCCCCeEEEccCCCCCcccCCCCCCeeEEccEEEEEEEEecCCC
Confidence            33333322   33333332222111    0   01122357888887776  688899999997654

>d1gdna_ b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5507]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Mold (Fusarium oxysporum) [TaxId: 5507]

Probab=99.43  E-value=1.5e-13  Score=84.53  Aligned_cols=120  Identities=23%  Similarity=0.301  Sum_probs=85.2

Q ss_pred             EEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee--
Q psy15292          3 KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         3 ~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      ...+..++.||.|..  ..+|||||+|++++.+.+.++|+|++...... .+..+.+.|||............++...  
T Consensus        66 ~~~~~~i~~h~~~~~--~~~DiAll~L~~~v~~~~~~~~i~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~l~~~~v~  143 (224)
T d1gdna_          66 TSSLSSVRVHPSYSG--NNNDLAILKLSTSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVP  143 (224)
T ss_dssp             EEEEEEEEECTTCBT--TBSCCEEEEESSCCCCBTTBCCCCBCCTTCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEE
T ss_pred             eEEEEEEEeeecccc--ccceeEEEeeccccccccccceeeccccccccccceeeeeeccCccccCCCcCCCEeeeeEEE
Confidence            456778889998765  46999999999999999999999998665433 6888999999987655444455565544  


Q ss_pred             -ccCCeEEEEecccee--------eccCeeeeecCCCCCCC---CCceEEEEeeccc
Q psy15292         80 -ISNDVALIKIDKDVV--------FKQHIIPVCLPDQTVKL---VGKSATVAGWGRT  124 (132)
Q Consensus        80 -~~~d~c~~~~~~~~~--------~~~~v~~icl~~~~~~~---~g~~~~v~gwg~~  124 (132)
                       ++++.|...+.....        ........|.++++.++   .+...+|..||..
T Consensus       144 ~i~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~c~~dsG~pl~~~~~~l~GI~S~g~~  200 (224)
T d1gdna_         144 IVSRATCRAQYGTSAITNQMFCAGVSSGGKDSCQGDSGGPIVDSSNTLIGAVSWGNG  200 (224)
T ss_dssp             EECHHHHHHHHCTTTSCTTEEEECCTTCCCBCCTTCTTCEEECTTCCEEEEEEECSS
T ss_pred             EeCHHHHhcccccCccccceeeeecCCCCccccccccCCceEecCCEEEEEEEeCCC
Confidence             666777554432211        11222346778887766   3679999999864

>d2qy0b1 b.47.1.2 (B:447-686) Complement C1R protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1R protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=2.4e-13  Score=84.55  Aligned_cols=66  Identities=29%  Similarity=0.648  Sum_probs=55.0

Q ss_pred             EEeeeEEEeCCCCCCC---CCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCC
Q psy15292          3 KLNTRQSFVHPQYSPS---DFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS   68 (132)
Q Consensus         3 ~~~v~~~~~h~~y~~~---~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~   68 (132)
                      .+.|.++++||+|+..   .+.+|||||+|++|+.+++.++|+|++...... .+..+.+.|||......
T Consensus        71 ~~~v~~i~vhp~y~~~~~~~~~~DiAll~L~~pi~~~~~v~pi~l~~~~~~~~~~~~~~~~g~g~~~~~~  140 (240)
T d2qy0b1          71 NHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKI  140 (240)
T ss_dssp             CCCEEEEEECTTCCTTCSSCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCCCSSSC
T ss_pred             eEEEEEEEeccccccccccccCCCceEEecCCccccccccceEEecccccccccCceeeecccccccccc
Confidence            4578999999999774   357899999999999999999999998766544 57778899999876543

>d1tona_ b.47.1.2 (A:) Tonin {Rat (Rattus rattus) [TaxId: 10117]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Tonin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.41  E-value=3.4e-13  Score=83.44  Aligned_cols=113  Identities=22%  Similarity=0.299  Sum_probs=79.3

Q ss_pred             CCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee---ccCCeEEEEec
Q psy15292         14 QYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS---ISNDVALIKID   90 (132)
Q Consensus        14 ~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~---~~~d~c~~~~~   90 (132)
                      .+......+||||++|.+++.+++.+.++|++..... ....+.+.|||.+..........++...   ++++.|...+.
T Consensus        85 ~~~~~~~~~Diall~L~~~v~~~~~i~~i~l~~~~~~-~~~~~~~~g~g~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~  163 (235)
T d1tona_          85 EQPVHDHSNDLMLLHLSEPADITGGVKVIDLPTKEPK-VGSTCLASGWGSTNPSEMVVSHDLQCVNIHLLSNEKCIETYK  163 (235)
T ss_dssp             --CCCCSTTCCEEEEESSCCCCCSSCCCCCCCCSCCC-TTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECGGGCGGGGS
T ss_pred             cccccccccceeEEEecCccccCCccccccccccccc-ccceeEEEEccccccccccccccceeeeeeeeCHHHHHHHhC
Confidence            3344567899999999999999999999999876654 5677889999987666544445566544   77888876554


Q ss_pred             ccee----e---ccCeeeeecCCCCCCC--CCceEEEEeecccCcC
Q psy15292         91 KDVV----F---KQHIIPVCLPDQTVKL--VGKSATVAGWGRTRHA  127 (132)
Q Consensus        91 ~~~~----~---~~~v~~icl~~~~~~~--~g~~~~v~gwg~~~~~  127 (132)
                      ....    .   .......|.++.+.++  .+...+|..||...+.
T Consensus       164 ~~~~~~~~c~~~~~~~~~~c~gdsG~Pl~~~~~l~Gi~S~g~~~c~  209 (235)
T d1tona_         164 DNVTDVMLCAGEMEGGKDTCAGDSGGPLICDGVLQGITSGGATPCA  209 (235)
T ss_dssp             TTGGGGEEEEECTTCSCBCCTTCTTCEEEETTEEEEEECCCCSSCS
T ss_pred             CCCCCCceEeCcCCCCccccCCCcCCeEEEcCEEEEEEEeCCCCCC
Confidence            3221    1   1112236778887776  6888999999876553

>d1xx9a_ b.47.1.2 (A:) Coagulation factor XI {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=3.4e-13  Score=83.60  Aligned_cols=122  Identities=18%  Similarity=0.347  Sum_probs=82.2

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee-
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS-   79 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~-   79 (132)
                      +.+.|.+++.||+|+.....+||||++|.+++.+.++++|+|++...... ....+.+.||+....... ....++... 
T Consensus        72 ~~~~v~~~~~h~~~~~~~~~~diAll~L~~~v~~~~~~~pi~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~~  150 (237)
T d1xx9a_          72 SFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDK-IQNTLQKAKI  150 (237)
T ss_dssp             CCEEEEEEEECTTCSCTTTSCCCEEEEESSCCCCBTTBCCCBCCCTTCTTCCCSCEEEEESCCSSTTCC-CCSBCEEEEC
T ss_pred             EEEEeeEEEEecccccccccceeEEEEeccccccccccceEEecccccccccccccEEEEeeccccccc-CCCccEEEEE
Confidence            45789999999999999999999999999999999999999997665433 566788999987655432 233444433 


Q ss_pred             --ccCCeEEEEeccceee--------ccCeeeeecCCCCCCC--CC----ceEEEEeeccc
Q psy15292         80 --ISNDVALIKIDKDVVF--------KQHIIPVCLPDQTVKL--VG----KSATVAGWGRT  124 (132)
Q Consensus        80 --~~~d~c~~~~~~~~~~--------~~~v~~icl~~~~~~~--~g----~~~~v~gwg~~  124 (132)
                        ++++.|...+......        .......|.++.+.++  .+    ...+|..||..
T Consensus       151 ~~~~~~~C~~~~~~~~~~~~~~c~~~~~~~~~~c~gdsG~pl~~~~~~~~~l~Gi~s~g~~  211 (237)
T d1xx9a_         151 PLVTNEECQKRYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEG  211 (237)
T ss_dssp             CEECHHHHHHHTTTSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEEESS
T ss_pred             EEeCHHHHhhhhcCCCCCCceEEEecCCCCcccccCCccceeEEecCCEEEEEEEEEeCCC
Confidence              4555554333221111        1122246777777665  22    35667777643

>d1z8ga1 b.47.1.2 (A:163-417) Hepsin, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepsin, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=7.3e-13  Score=82.96  Aligned_cols=121  Identities=26%  Similarity=0.392  Sum_probs=80.4

Q ss_pred             eEEeeeEEEeCCC------CCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCccccc
Q psy15292          2 FKLNTRQSFVHPQ------YSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAI   74 (132)
Q Consensus         2 ~~~~v~~~~~h~~------y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~   74 (132)
                      +...+.+++.||.      |+.....+|||||+|++++.+++.++|+||+...... .+..+.+.||+........ ...
T Consensus        68 ~~~~v~~~~~h~~~~~~~~~~~~~~~~DiAll~L~~~v~~~~~~~p~~l~~~~~~~~~~~~~~~~G~~~~~~~~~~-~~~  146 (255)
T d1z8ga1          68 LQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQ-AGV  146 (255)
T ss_dssp             EEECEEEEEEETTCGGGTCTTCCCCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCB-CSB
T ss_pred             EEEEEEEEEEEeeeccccccccCCccccEEEEecCCccccCcccccceecccCcccCCCcEEEeeccccccCCCcc-cce
Confidence            4567888999988      5566788999999999999999999999998665433 6778889999876554432 334


Q ss_pred             ceeee---ccCCeEEEEeccceeeccC---------eeeeecCCCCCCC--CC--------ceEEEEeecc
Q psy15292         75 PTYVS---ISNDVALIKIDKDVVFKQH---------IIPVCLPDQTVKL--VG--------KSATVAGWGR  123 (132)
Q Consensus        75 l~~~~---~~~d~c~~~~~~~~~~~~~---------v~~icl~~~~~~~--~g--------~~~~v~gwg~  123 (132)
                      ++...   +.++.|...+.......+.         -...|.++++.++  .+        ...+|..||.
T Consensus       147 l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~c~gdsGgPl~~~~~~~~~~~~~l~Gi~S~g~  217 (255)
T d1z8ga1         147 LQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGT  217 (255)
T ss_dssp             CEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCTTCSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBS
T ss_pred             eEEEEEEEeCHHHhhhhhccCccccCcceEEecCCCCcccccCccccceEEecCCCCCCcEEEEEEEEECC
Confidence            44433   5556664332222211222         2235777776665  11        3677888875

>d1gvza_ b.47.1.2 (A:) Prostate specific antigen (PSA kallikrein) {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Prostate specific antigen (PSA kallikrein)
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.36  E-value=1.1e-12  Score=81.19  Aligned_cols=122  Identities=21%  Similarity=0.372  Sum_probs=82.9

Q ss_pred             EEeeeEEEeCCCCCC-----------CCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcc
Q psy15292          3 KLNTRQSFVHPQYSP-----------SDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLS   71 (132)
Q Consensus         3 ~~~v~~~~~h~~y~~-----------~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~   71 (132)
                      ...+...+.|+.|+.           ..+.+|||||+|++|+.+++.++|+|||..... .+..+.+.|||.........
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Diali~L~~pv~~~~~v~p~~l~~~~~~-~~~~~~~~g~g~~~~~~~~~  143 (237)
T d1gvza_          65 FHQVSDSFLDPQFDLSLLKKKYLRPYDDISHDLMLLRLAQPARITDAVKILDLPTQEPK-LGSTCYTSGWGLISTFTNRG  143 (237)
T ss_dssp             EECEEEEEECTTSCGGGGGCSSCCTTSCCTTCCEEEEESSCCCCBTTBCCCCCCSSCCC-TTCEEEEEEEECSCTTTCSE
T ss_pred             eeeeeeEEeeeeeeeeeeecccccCccccccceEEEEECCceecccccccccccccccc-cceeEEEEeeeeeccccccc
Confidence            345566677776643           235799999999999999999999999976554 67788899999876554444


Q ss_pred             cccceeee---ccCCeEEEEeccceee-------ccCeeeeecCCCCCCC--CCceEEEEeecccC
Q psy15292         72 SAIPTYVS---ISNDVALIKIDKDVVF-------KQHIIPVCLPDQTVKL--VGKSATVAGWGRTR  125 (132)
Q Consensus        72 ~~~l~~~~---~~~d~c~~~~~~~~~~-------~~~v~~icl~~~~~~~--~g~~~~v~gwg~~~  125 (132)
                      ...+++..   ++++.|...+.....-       .......|.++.+.++  .+...+|..||...
T Consensus       144 ~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~gdsG~pl~~~~~l~Gv~s~g~~~  209 (237)
T d1gvza_         144 SGTLQCVELRLQSNEKCARAYPEKMTEFVLCATHRDDSGSICLGDSGGALICDGVFQGITSWGYSE  209 (237)
T ss_dssp             EEEEEEEEEEEECGGGGCSSCGGGCCTTEEEEECSSTTCEECGGGTTCEEEETTEEEEEECCCSSS
T ss_pred             cceeeEEEEEeecHHHHHhhcccccccccccceecccccccccCCCCCcEEEcCEEEEEEEeccCC
Confidence            55566655   6777776654332210       1112245666666665  56677888887653

>d1elva1 b.47.1.2 (A:410-668) Complement C1S protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1S protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=9e-13  Score=82.67  Aligned_cols=67  Identities=30%  Similarity=0.717  Sum_probs=54.1

Q ss_pred             eEEeeeEEEeCCCCCC-------CCCCCceEEEEeCCCeeeCCCeeeeeecCCCCc---ccCCcEEEeccCccccCC
Q psy15292          2 FKLNTRQSFVHPQYSP-------SDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK---LVGKSATVAGWGRTRHAS   68 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~-------~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~---~~g~~~~~~GwG~~~~~~   68 (132)
                      +.+.|.++++||+|..       ..+.+|||||+|.+++.+++.++|+|++.....   ..+..+.+.||+.+....
T Consensus        77 ~~~~v~~i~~hp~~~~~~~~~~~~~~~~DIAllkL~~~~~~~~~v~pic~~~~~~~~~~~~~~~~~~~g~~~~~~~~  153 (259)
T d1elva1          77 KMLTPEHVFIHPGWKLLAVPEGRTNFDNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRD  153 (259)
T ss_dssp             CEECEEEEEECTTSCCCSSCTTCCCCTTCCEEEEESSCCCCBTTBCCCBCCCSSGGGCCCTTCEEEEEESCCCSSCS
T ss_pred             ccccceeEeecceeecccccccCCCcccceeeeecccceehhcccCceeeccCccccccccceEEEEeccccccccc
Confidence            3567899999999953       456799999999999999999999999765432   257788999999765543

>d2hlca_ b.47.1.2 (A:) HL collagenase {Common cattle grub (Hypoderma lineatum) [TaxId: 7389]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: HL collagenase
species: Common cattle grub (Hypoderma lineatum) [TaxId: 7389]

Probab=99.35  E-value=8.2e-13  Score=81.52  Aligned_cols=119  Identities=24%  Similarity=0.365  Sum_probs=74.4

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc---cCCcEEEeccCccccCCCcccccceee
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL---VGKSATVAGWGRTRHASSLSSAIPTYV   78 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~---~g~~~~~~GwG~~~~~~~~~~~~l~~~   78 (132)
                      +.+.|.+++.||+|+.....+|||||+|+.+ .+.++++|+||+......   .+..+...|||.......    .++..
T Consensus        67 ~~~~v~~i~~hp~y~~~~~~~DiALl~L~~~-~~~~~v~pi~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~  141 (230)
T d2hlca_          67 AVVNSERIISHSMFNPDTYLNDVALIKIPHV-EYTDNIQPIRLPSGEELNNKFENIWATVSGWGQSNTDTV----ILQYT  141 (230)
T ss_dssp             EEEECSEEEECTTCBTTTTBTCCEEEECSCC-CCCSSCCCCBCCCGGGGGCCCTTCEEEEEESSCCSSCCC----BCEEE
T ss_pred             cceeeEeEEeeecccccccccceeEEEeecc-cccccceeEEeeccccccccccceeEEEEeeccccccch----hhhee
Confidence            4577899999999999999999999999875 578899999997654322   466778889987544322    22222


Q ss_pred             e---ccCCeEEEEeccceeecc-------CeeeeecCCCCCCC--C--CceEEEEeecccC
Q psy15292         79 S---ISNDVALIKIDKDVVFKQ-------HIIPVCLPDQTVKL--V--GKSATVAGWGRTR  125 (132)
Q Consensus        79 ~---~~~d~c~~~~~~~~~~~~-------~v~~icl~~~~~~~--~--g~~~~v~gwg~~~  125 (132)
                      .   +.++.|...+........       .....|.++++.++  .  .....|..|+...
T Consensus       142 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgp~~~~~~~~l~Gi~S~~~~~  202 (230)
T d2hlca_         142 YNLVIDNDRCAQEYPPGIIVESTICGDTSDGKSPCFGDSGGPFVLSDKNLLIGVVSFVSGA  202 (230)
T ss_dssp             EEEEECHHHHHTTSCTTSSCTTEEEECCTTSCBCCTTCTTCEEEEGGGTEEEEEEEECCTT
T ss_pred             eeccccchhhhhccccccccccceEeccccCccccccccCCCeEECCCeEEEEEEEEeCCC
Confidence            2   444444332222111111       11235556665554  3  3377887776643

>d1fona_ b.47.1.2 (A:) Procarboxypeptidase A-S6 subunit III (zymogen E) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Procarboxypeptidase A-S6 subunit III (zymogen E)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.34  E-value=4.9e-13  Score=82.65  Aligned_cols=121  Identities=19%  Similarity=0.249  Sum_probs=76.9

Q ss_pred             EEeeeEEEeCCCCCCCC--CCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee
Q psy15292          3 KLNTRQSFVHPQYSPSD--FRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS   79 (132)
Q Consensus         3 ~~~v~~~~~h~~y~~~~--~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~   79 (132)
                      ...|.++++||+|+...  ..+|||||+|..++.+++.++|+|++...... .+..+.+.||+....... ....++...
T Consensus        63 ~~~v~~i~~hp~~~~~~~~~~~diAll~l~~~~~~~~~~~pic~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~  141 (232)
T d1fona_          63 PINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQLGDKVQLANLPPAGDILPNEAPCYISGWGRLYTGGP-LPDKLQQAL  141 (232)
T ss_dssp             EECTTSEEECTTCCTTCGGGCCCCEEEECSSCCCCTTSCCCCBCCCTTCCCCTTCCCEEEECTTCCCSSS-CCSBCEEEE
T ss_pred             cceeEEEEEccCccccccccccceeeeecccceEEeecceeeecCcccccCCCCceeEeeccccccCCCC-CCCcceEEE
Confidence            45688999999998755  45999999999999999999999998765433 567788899988765543 233444333


Q ss_pred             ---ccCCeEEEEeccceeeccC-------eeeeecCCCCCCC--C---C--ceEEEEeeccc
Q psy15292         80 ---ISNDVALIKIDKDVVFKQH-------IIPVCLPDQTVKL--V---G--KSATVAGWGRT  124 (132)
Q Consensus        80 ---~~~d~c~~~~~~~~~~~~~-------v~~icl~~~~~~~--~---g--~~~~v~gwg~~  124 (132)
                         ++++.|.............       -...|.++.+.++  .   |  ...+|..|+..
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~gdsGgpl~~~~~~~~~~L~Gi~s~~~~  203 (232)
T d1fona_         142 LPTVDYEHCSQWDWWGITVKKTMVCAGGDTRSGCNGDSGGPLNCPAADGSWQVHGVTSFVSA  203 (232)
T ss_dssp             CCEECHHHHTSTTTTGGGCCTTEEEECCSSSCSTTSCTTCEEEEECSSSCEEEEEEEEECCT
T ss_pred             EEEEcHHHhhhhhccCceeeeceeeeccccccccccCCCCceEEEccCCCEEEEEEEEEcCC
Confidence               4444443222111111111       1234666666553  1   1  36777777653

>d1autc_ b.47.1.2 (C:) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=7.1e-13  Score=82.15  Aligned_cols=66  Identities=36%  Similarity=0.789  Sum_probs=56.2

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCC-----CcccCCcEEEeccCccccC
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQT-----VKLVGKSATVAGWGRTRHA   67 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~-----~~~~g~~~~~~GwG~~~~~   67 (132)
                      +...|.++++||+|......+|||||+|..++.++++++|+|||...     ....+..+.+.|||.....
T Consensus        67 ~~~~v~~i~~~~~~~~~~~~~DiAli~L~~~v~~~~~v~picL~~~~~~~~~~~~~~~~~~~~g~g~~~~~  137 (240)
T d1autc_          67 LDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQETLVTGWGYHSSR  137 (240)
T ss_dssp             EEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTTTSTTCEEEEEECCCCCSC
T ss_pred             eeeeeeccccceeeeccccccceeEEEeCCcccCCcccccceeccCcccccccccCCCeEEEEeeccccCC
Confidence            46789999999999999999999999999999999999999998653     1225778999999976544

>d1brup_ b.47.1.2 (P:) Elastase {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.29  E-value=6.4e-12  Score=77.70  Aligned_cols=123  Identities=22%  Similarity=0.340  Sum_probs=81.5

Q ss_pred             eEEeeeEEEeCCCCCCCCC--CCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceee
Q psy15292          2 FKLNTRQSFVHPQYSPSDF--RNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYV   78 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~--~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~   78 (132)
                      +.+.|.++++|++|+....  .+|||||+|..++.++..++|+|++...... .+..+.+.|||....... ....+++.
T Consensus        70 ~~~~v~~~~~~~~~~~~~~~~d~~iall~l~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~g~g~~~~~~~-~~~~~~~~  148 (241)
T d1brup_          70 LAVKVSKLVVHQDWNSNQLSNGNDIALLKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNGA-SPDILQQG  148 (241)
T ss_dssp             EEEEEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSTTSC-CCSBCEEE
T ss_pred             cccceeeeEEEeeeeeccccCCceEEEEecccccccccceeeeeeccccccCCCceeEEEEeeeccCCCCc-CCCcceEE
Confidence            4577889999999977554  5679999999999999999999998765543 677889999998665433 23444443


Q ss_pred             e---ccCCeEEEEeccceeeccCe--------eeeecCCCCCCC--CC-----ceEEEEeecccC
Q psy15292         79 S---ISNDVALIKIDKDVVFKQHI--------IPVCLPDQTVKL--VG-----KSATVAGWGRTR  125 (132)
Q Consensus        79 ~---~~~d~c~~~~~~~~~~~~~v--------~~icl~~~~~~~--~g-----~~~~v~gwg~~~  125 (132)
                      .   ++++.|..............        ...|.++++.++  .+     ...+|..||...
T Consensus       149 ~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~C~gdsGgPl~~~~~~~~~~L~Gi~S~g~~~  213 (241)
T d1brup_         149 QLLVVDYATCSKPGWWGSTVKTNMICAGGDGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSL  213 (241)
T ss_dssp             EEEEECHHHHTSTTTTGGGCCTTEEEECCSSSSBCCTTCTTCEEEEECTTSCEEEEEEEEECBTT
T ss_pred             EEEEeCHHHhCccccccccccccceeecCCCCccccCCCcccceEEEcCCCCEEEEEEEEECCCC
Confidence            3   66666654322222122111        135677776655  22     466777787643

>d2p3ub1 b.47.1.2 (B:16-243) Coagulation factor Xa, protease domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=3.9e-12  Score=78.32  Aligned_cols=122  Identities=17%  Similarity=0.375  Sum_probs=79.7

Q ss_pred             eEEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCc----ccCCcEEEeccCccccCCCccccccee
Q psy15292          2 FKLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK----LVGKSATVAGWGRTRHASSLSSAIPTY   77 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~----~~g~~~~~~GwG~~~~~~~~~~~~l~~   77 (132)
                      +.+.+.+++.||+|+.....+|||||+|..|+.+++++.|+|||.....    .....+.+.+|+........ ...++.
T Consensus        67 ~~~~~~~i~~h~~~~~~~~~~diAll~L~~pv~~~~~v~pi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  145 (233)
T d2p3ub1          67 AVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQ-STRLKM  145 (233)
T ss_dssp             EEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHTTTSSEEEEEESCBSSTTSCB-CSBCEE
T ss_pred             eeecceeEEEeecccccccccceeeeecccceeecccccccccCCcccccccccccceEEEecCCccccCCCc-cccccc
Confidence            3567889999999999999999999999999999999999999865321    13455778888876654432 222222


Q ss_pred             --ee-ccCCeEEEEecccee-------eccCeeeeecCCCCCCC--CCc----eEEEEeeccc
Q psy15292         78 --VS-ISNDVALIKIDKDVV-------FKQHIIPVCLPDQTVKL--VGK----SATVAGWGRT  124 (132)
Q Consensus        78 --~~-~~~d~c~~~~~~~~~-------~~~~v~~icl~~~~~~~--~g~----~~~v~gwg~~  124 (132)
                        +. ++++.|.......+.       ....-...|.++.+.++  .+.    ..+|..||..
T Consensus       146 ~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgpl~~~~~~~~~L~Gv~s~g~~  208 (233)
T d2p3ub1         146 LEVPYVDRNSCKLSSSFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEG  208 (233)
T ss_dssp             EEEEBCCHHHHHHHCSSCCCTTEEEESCSSSSCBCCTTTTTCEEEEEETTEEEEEEEEEECSS
T ss_pred             cccccccchhhhcccCceEeecceeeecccccCCCcCCCcccccEEecCCeEEEEEEEEECCC
Confidence              22 555555543322111       11222346667776665  333    6778888754

>d1m9ua_ b.47.1.2 (A:) Elastase {Worm (Eisenia fetida) [TaxId: 6396]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Worm (Eisenia fetida) [TaxId: 6396]

Probab=99.21  E-value=7.4e-12  Score=77.41  Aligned_cols=86  Identities=21%  Similarity=0.402  Sum_probs=64.7

Q ss_pred             eEEeeeEEEeCCCCCCC--CCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceee
Q psy15292          2 FKLNTRQSFVHPQYSPS--DFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYV   78 (132)
Q Consensus         2 ~~~~v~~~~~h~~y~~~--~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~   78 (132)
                      +.+.|.++++||+|+..  .+.+|||||+|+.++.+++.+.|+|++...... .+..+.+.||+....... ....++..
T Consensus        70 ~~~~v~~~~~h~~~~~~~~~~~~diall~l~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~  148 (241)
T d1m9ua_          70 QTANVDSYTMHENYGAGTASYSNDIAILHLATSISLGGNIQAAVLPANNNNDYAGTTCVISGWGRTDGTNN-LPDILQKS  148 (241)
T ss_dssp             EEEEEEEEEECTTTTCSSSTTTTCCEEEEESSCCCCCSSCCCCCCCSCSSCCCTTCEEEEEESSCSSSSSC-CCSBCEEE
T ss_pred             ccccceeeeeeeeeccccccccccceeeeccceeeeeeceeeeeeeccccccccceEEEEeecccccCCCC-CCCcceEE
Confidence            46788999999998874  467899999999999999999999998665433 678888999998765433 23334443


Q ss_pred             e---ccCCeEEEE
Q psy15292         79 S---ISNDVALIK   88 (132)
Q Consensus        79 ~---~~~d~c~~~   88 (132)
                      .   ++++.|...
T Consensus       149 ~~~~~~~~~C~~~  161 (241)
T d1m9ua_         149 SIPVITTAQCTAA  161 (241)
T ss_dssp             EEEBCCHHHHHHH
T ss_pred             EEEeechhHhhhh
Confidence            3   666666543

>d1si5h_ b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepatocyte growth factor, HGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=2.3e-11  Score=75.13  Aligned_cols=116  Identities=19%  Similarity=0.204  Sum_probs=66.9

Q ss_pred             eEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee---ccC
Q psy15292          7 RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS---ISN   82 (132)
Q Consensus         7 ~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~---~~~   82 (132)
                      .+++.|++|......+|||||+|+.++.++++++|+||+...... .+..+.+.||+......  ....++...   ++.
T Consensus        68 ~~~~~~~~~~~~~~~~DIAll~L~~~v~~~~~v~picl~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~l~~~~~~~~~~  145 (234)
T d1si5h_          68 KQVLNVSQLVYGPEGSDLVLMKLARPAVLDDFVSTIDLPNYGSTIPEKTSCSVYGWGYTGLIN--YDGLLRVAHLYIMGN  145 (234)
T ss_dssp             CEEEEEEEEEECSSTTCEEEEEESSCCCCSSSCCCCBCCCTTCCCCTTCEEEEEESSCCCCSS--CCCBCEEEEEEEECG
T ss_pred             EEEEeeccccCCCcccceEEEeeccCccccccccccccccccccCCcceeEEEeccccccccc--ccceeEEEEeeccch
Confidence            345555555554556899999999999999999999998776544 45566777777654432  233444433   444


Q ss_pred             CeEEEEeccceeecc---------CeeeeecCCCCCCC--CCc----eEEEEeeccc
Q psy15292         83 DVALIKIDKDVVFKQ---------HIIPVCLPDQTVKL--VGK----SATVAGWGRT  124 (132)
Q Consensus        83 d~c~~~~~~~~~~~~---------~v~~icl~~~~~~~--~g~----~~~v~gwg~~  124 (132)
                      +.|...+.......+         .-...|.++.+.++  .+.    ...|..||..
T Consensus       146 ~~~~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsG~pl~~~~~~~~~l~Gi~s~g~~  202 (234)
T d1si5h_         146 EKCSQHHRGKVTLNESEICAGAEKIGSGPCEGDYGGPLVCEQHKMRMVLGVIVPGRG  202 (234)
T ss_dssp             GGTCC-------CCTTEEEEECSSSCCBCCTTCTTCEEEEECSSSEEEEEEECSCSC
T ss_pred             hHhhhhhccccccCCccEEEccCCcCCCCCcCccccceEEecCCeEEEEEEEEeCCC
Confidence            554443333222221         12245666666555  222    5666666643

>d1elta_ b.47.1.2 (A:) Elastase {Salmon (Salmo salar) [TaxId: 8030]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Salmon (Salmo salar) [TaxId: 8030]

Probab=99.16  E-value=9.3e-11  Score=72.16  Aligned_cols=66  Identities=20%  Similarity=0.468  Sum_probs=51.9

Q ss_pred             EEeeeEEEeCCCCCCCC--CCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCC
Q psy15292          3 KLNTRQSFVHPQYSPSD--FRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS   68 (132)
Q Consensus         3 ~~~v~~~~~h~~y~~~~--~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~   68 (132)
                      ...+..+.+|+.|....  ..+|||||+|..++.++..++|+|||...... ....+.+.|||......
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~diall~l~~~~~~~~~~~picL~~~~~~~~~~~~~~~~g~g~~~~~~  139 (236)
T d1elta_          71 IMTVNSVFIHSGWNSDDVAGGYDIALLRLNTQASLNSAVQLAALPPSNQILPNNNPCYITGWGKTSTGG  139 (236)
T ss_dssp             EECEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCCEEEEESCCSSTTC
T ss_pred             eeeeeEEEEeeeecccccccCceEEEeeccCcceeecccceeecCchhcccCCCceEEEecccccccCc
Confidence            34566677888877654  46799999999999999999999999765543 56778899999866543

>d1rfna_ b.47.1.2 (A:) Coagulation factor IXa, protease domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor IXa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=4.9e-11  Score=73.40  Aligned_cols=122  Identities=23%  Similarity=0.427  Sum_probs=79.1

Q ss_pred             EEeeeEEEeCCCCCCC--CCCCceEEEEeCCCeeeCCCeeeeeecCCCCc---ccCCcEEEeccCccccCCCccccccee
Q psy15292          3 KLNTRQSFVHPQYSPS--DFRNDVALIKIDKDVVFKQHIIPVCLPDQTVK---LVGKSATVAGWGRTRHASSLSSAIPTY   77 (132)
Q Consensus         3 ~~~v~~~~~h~~y~~~--~~~~diall~l~~~~~~~~~~~~~cl~~~~~~---~~g~~~~~~GwG~~~~~~~~~~~~l~~   77 (132)
                      ...+.++++||+|+..  ...+|||||+|++++.++..+.|+|++.....   ..+..+.+.||+....... ....+++
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~diAllkL~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~l~~  145 (235)
T d1rfna_          67 KRNVIRIIPHHNYNAAINKYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGR-SALVLQY  145 (235)
T ss_dssp             EEEEEEEEECTTCBTTTBSSTTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHHTTSEEEEEESCBSSTTSC-BCSBCEE
T ss_pred             eeeeeEEeeccCCCCCcCccCceEEEEEeCCCccCCCccceeeeccccccccccccceEEEecccccccccc-ccCcceE
Confidence            4678899999999764  46799999999999999999999999864322   2566788899988665533 3444555


Q ss_pred             ee---ccCCeEEEEeccce-------eeccCeeeeecCCCCCCC--CC----ceEEEEeecccC
Q psy15292         78 VS---ISNDVALIKIDKDV-------VFKQHIIPVCLPDQTVKL--VG----KSATVAGWGRTR  125 (132)
Q Consensus        78 ~~---~~~d~c~~~~~~~~-------~~~~~v~~icl~~~~~~~--~g----~~~~v~gwg~~~  125 (132)
                      ..   ++++.|...+....       .........|.++.+.++  ..    ....|..||...
T Consensus       146 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgpl~~~~~~~~~l~Gi~s~g~~~  209 (235)
T d1rfna_         146 LRVPLVDRATCLRSTKFTIYNNMFCAGFHEGGRDSCQGDSGGPHVTEVEGTSFLTGIISWGEEC  209 (235)
T ss_dssp             EEEEBCCHHHHHHHCSSCCCTTEEEESCSSCSCBCCTTCTTCEEEEESSSCEEEEEEEEEESSS
T ss_pred             EEEecccccccccccCceecCCeeEeecCCCCccccCCCCCceeEEecCCeEEEEEEEEeCCCC
Confidence            44   45555543222110       011222346666666655  22    267788887644

>d1rrka1 b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=3.8e-11  Score=76.40  Aligned_cols=46  Identities=35%  Similarity=0.647  Sum_probs=39.9

Q ss_pred             EEeeeEEEeCCCCCC---------CCCCCceEEEEeCCCeeeCCCeeeeeecCCC
Q psy15292          3 KLNTRQSFVHPQYSP---------SDFRNDVALIKIDKDVVFKQHIIPVCLPDQT   48 (132)
Q Consensus         3 ~~~v~~~~~h~~y~~---------~~~~~diall~l~~~~~~~~~~~~~cl~~~~   48 (132)
                      .+.|+++++||+|+.         ..+.||||||+|++++.|+++++|||||...
T Consensus        70 ~~~v~~i~~Hp~y~~~~~~~~~~~~~~~~DIALl~L~~~~~~s~~v~PIcLp~~~  124 (287)
T d1rrka1          70 DLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTE  124 (287)
T ss_dssp             CEEEEEEEECTTCCTTTTGGGTCSSCCTTCCEEEEESSCCCCBTTBCCCBCTTBH
T ss_pred             eeeeEEEEecCCccccccccccCCCcccccEEEEecccCccccceEEEEecCCcc
Confidence            467899999999974         3456999999999999999999999998653

>d1os8a_ b.47.1.1 (A:) Trypsin {Streptomyces griseus, strain k1 [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Trypsin
species: Streptomyces griseus, strain k1 [TaxId: 1911]

Probab=98.97  E-value=3.4e-10  Score=69.35  Aligned_cols=116  Identities=20%  Similarity=0.261  Sum_probs=67.2

Q ss_pred             EeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee---c
Q psy15292          4 LNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS---I   80 (132)
Q Consensus         4 ~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~---~   80 (132)
                      ..+..+.+||+|+.....||||||+|++++.+     ++|++.......+..+.+.||+........ ...++...   +
T Consensus        63 ~~i~~~~i~~~~~~~~~~~DIAllkL~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  136 (223)
T d1os8a_          63 VKVRSTKVLQAPGYNGTGKDWALIKLAQPINQ-----PTLKIATTTAYNQGTFTVAGWGANREGGSQ-QRYLLKANVPFV  136 (223)
T ss_dssp             EEEEEEEEEECTTCSSSSCCCEEEEESSCCCS-----CCCEECCSSTTSSSEEEEEESSCSSTTCCC-CSBCEEEEEEEE
T ss_pred             ccceeeeeeecccccccceeeeeeeeeeeeec-----ccccccccccccccceEEeecccccccccc-ccccccceeeEe
Confidence            34556666777777778899999999998765     445544443346778889999876544332 23333322   6


Q ss_pred             cCCeEEEEeccceeeccC---------eeeeecCCCCCCC--CCc-----eEEEEeecccC
Q psy15292         81 SNDVALIKIDKDVVFKQH---------IIPVCLPDQTVKL--VGK-----SATVAGWGRTR  125 (132)
Q Consensus        81 ~~d~c~~~~~~~~~~~~~---------v~~icl~~~~~~~--~g~-----~~~v~gwg~~~  125 (132)
                      ++..|...+.........         ....|..+.+.++  .+.     ..+|..||...
T Consensus       137 ~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~G~pl~~~~~~~~~~L~Gi~s~~~~c  197 (223)
T d1os8a_         137 SDAACRSAYGNELVANEEICAGYPDTGGVDTCQGDSGGPMFRKDNADEWIQVGIVSWGYGC  197 (223)
T ss_dssp             CHHHHHHHHGGGSCTTTEEEESCTTTCCCBCCTTCTTCEEEEECTTSCEEEEEEEEECSSS
T ss_pred             CHHHhhhhhcCCCccCcceeeeccccCCcCccccccccceEEecCCCeEEEEEEEEeCCCC
Confidence            666665444332221111         1124555555544  222     57777787543

>d2bz6h1 b.47.1.2 (H:16-257) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=6.8e-10  Score=68.85  Aligned_cols=67  Identities=27%  Similarity=0.628  Sum_probs=55.3

Q ss_pred             EEeeeEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCC----CcccCCcEEEeccCccccCCC
Q psy15292          3 KLNTRQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQT----VKLVGKSATVAGWGRTRHASS   69 (132)
Q Consensus         3 ~~~v~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~----~~~~g~~~~~~GwG~~~~~~~   69 (132)
                      ...+..++.|+.|......+|||||+|+.++.+++.++|+||+...    ....+..+.+.|||.......
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~DiAll~L~~~v~~~~~i~picl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (254)
T d2bz6h1          70 SRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGA  140 (254)
T ss_dssp             EEEEEEEEEETTCCTTSCSSCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSSTTSC
T ss_pred             eeeeeeeeecccccccccccceeEEEecCcccccceEeeeecCccccccccccCCceEEEeccCccCCCCc
Confidence            4567788999999999999999999999999999999999998642    122566788999998766543

>d1gvkb_ b.47.1.2 (B:) Elastase {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.86  E-value=1.6e-09  Score=66.58  Aligned_cols=62  Identities=19%  Similarity=0.258  Sum_probs=48.0

Q ss_pred             eEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCC
Q psy15292          7 RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAS   68 (132)
Q Consensus         7 ~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~   68 (132)
                      ..++.|+.++.....+|||||+|..++.+.+.++|+||+...... .+....+.||+.+....
T Consensus        77 ~~~~~~~~~~~~~~~~diAll~l~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~g~~~~~~~~  139 (240)
T d1gvkb_          77 IVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNG  139 (240)
T ss_dssp             EEECTTCCTTCGGGCCCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCCEEEEESCBSSTTC
T ss_pred             eeEEEeecccccccCcceeeecccCcccccccccceeeccCccccccccceeEeccccccccc
Confidence            334456666777889999999999999999999999998765433 45567788898766543

>d1rjxb_ b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Plasmin(ogen), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1.3e-09  Score=67.36  Aligned_cols=117  Identities=22%  Similarity=0.289  Sum_probs=68.5

Q ss_pred             eEEEeCCCCCCCCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcc-cCCcEEEeccCccccCCCcccccceeee---ccC
Q psy15292          7 RQSFVHPQYSPSDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHASSLSSAIPTYVS---ISN   82 (132)
Q Consensus         7 ~~~~~h~~y~~~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~-~g~~~~~~GwG~~~~~~~~~~~~l~~~~---~~~   82 (132)
                      .+.+.|+.|......+||||++|..++.+++.+.|+||+...... ....+...|||.......  ...+++..   +++
T Consensus        86 ~~~~~~~~~~~~~~~~DiAl~~L~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~  163 (247)
T d1rjxb_          86 VQEIEVSRLFLEPTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTFG--AGLLMEAQLPVIEN  163 (247)
T ss_dssp             CEEEEEEEEEECSSSCCEEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCC----CC--CSBCEEEEEEEECH
T ss_pred             eeEEeeccccCCCccchhhhhhhhcccccccccccccccccccccCCCceeeecccccccCCCC--CCcceEEEEEEEch
Confidence            355666777777788999999999999999999999998665433 455677788887544322  33333322   333


Q ss_pred             CeEEEEecccee-e--------ccCeeeeecCCCCCCC--CCc----eEEEEeecccC
Q psy15292         83 DVALIKIDKDVV-F--------KQHIIPVCLPDQTVKL--VGK----SATVAGWGRTR  125 (132)
Q Consensus        83 d~c~~~~~~~~~-~--------~~~v~~icl~~~~~~~--~g~----~~~v~gwg~~~  125 (132)
                      +.|......... .        .......|.++++.++  .+.    ..+|..||...
T Consensus       164 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~c~gdsG~pl~~~~~~~~~l~Gi~S~~~~c  221 (247)
T d1rjxb_         164 KVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGC  221 (247)
T ss_dssp             HHHTSTTTTTTCSCTTEEEESCSSSCCCBCCSCTTCEEEEECSSSEEEEEEECTTSCC
T ss_pred             HHhhhhhccCcccccceeEEeccCCCcccccCCccceEEEeeCCEEEEEEEEEeCCCC
Confidence            333221111110 0        1112235667776665  332    77888887543

>d1j16a_ b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.07  E-value=3.4e-06  Score=51.01  Aligned_cols=49  Identities=31%  Similarity=0.622  Sum_probs=42.6

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.+++.+.++||+..... .+..|.+.|||....++.
T Consensus        81 ~~~diAll~L~~~v~~~~~~~picL~~~~~~-~~~~~~~~g~g~~~~~~~  129 (223)
T d1j16a_          81 YNNDIMLIKLSSPVKLNARVATVALPSSCAP-AGTQCLISGWGNTLSSGV  129 (223)
T ss_dssp             TBTCCEEEEESSCCCCBTTBCCCBCCSSCCC-TTCEEEEEESSCCCSSSC
T ss_pred             cceeEEEEEecCccccceeEEEEecCCcCCC-CCCEEEEEeeeeeeCCCc
Confidence            5689999999999999999999999987554 789999999998776543

>d1ekbb_ b.47.1.2 (B:) Enteropeptidase (enterokinase light chain) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Enteropeptidase (enterokinase light chain)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.01  E-value=5.2e-06  Score=50.38  Aligned_cols=50  Identities=30%  Similarity=0.722  Sum_probs=43.6

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.++..+.++|||...... .+..|.+.|||.....+.
T Consensus        89 ~~~diAli~L~~~v~~~~~~~picLp~~~~~~~~~~~~~~~g~~~~~~~~~  139 (235)
T d1ekbb_          89 KNNDIAMMHLEMKVNYTDYIQPICLPEENQVFPPGRICSIAGWGALIYQGS  139 (235)
T ss_dssp             TBSCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSC
T ss_pred             ccchhhhhhhcCceecCCceeeEECCCccccCCcceEEEEecccccccCCc
Confidence            67899999999999999999999999876554 799999999999876543

>d1lo6a_ b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=1e-05  Score=48.68  Aligned_cols=49  Identities=20%  Similarity=0.443  Sum_probs=42.7

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++...+.+++.+.++|++..... .+..|.++|||.......
T Consensus        82 ~~~diAll~l~~~~~~~~~v~pi~l~~~~~~-~~~~~~~~Gwg~~~~~~~  130 (221)
T d1lo6a_          82 HDQDIMLLRLARPAKLSELIQPLPLERDCSA-NTTSCHILGWGKTADGDF  130 (221)
T ss_dssp             CTTCCEEEEESSCCCCBTTBCCCCBCCCTTC-CCCEEEEEESSCCTTSSC
T ss_pred             ccceeEEeecccccceeeeEEeccccccCCc-ccceEEEEecccccCCCC
Confidence            6789999999999999999999999987544 789999999998776543

>d1fxya_ b.47.1.2 (A:) Coagulation factor Xa-trypsin chimera {Synthetic, based on Homo sapiens sequence}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa-trypsin chimera
species: Synthetic, based on Homo sapiens sequence

Probab=97.81  E-value=2.2e-05  Score=47.40  Aligned_cols=49  Identities=24%  Similarity=0.652  Sum_probs=42.8

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++...+.+++.+.++||+..... .+..|.++|||.+..+..
T Consensus        85 ~~~diAl~~l~~~~~~~~~~~picL~~~~~~-~~~~~~~~gwg~~~~~~~  133 (228)
T d1fxya_          85 YDFDIAVLRLKTPITFRMNVAPASLPTAPPA-TGTKCLISGWGNTASSGA  133 (228)
T ss_dssp             TBTCCEEEEESSCCCCBTTBCCCCCCSSCCC-TTCEEEEEESSCCCSSSC
T ss_pred             cccceeehhcccccccccccccccccccccc-cccEEEEEecccccCCCC
Confidence            6789999999999999999999999987665 688999999998876543

>d1p3ca_ b.47.1.1 (A:) Glutamyl endopeptidase {Bacillus intermedius [TaxId: 1400]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamyl endopeptidase
species: Bacillus intermedius [TaxId: 1400]

Probab=97.79  E-value=1.7e-06  Score=51.97  Aligned_cols=111  Identities=15%  Similarity=0.129  Sum_probs=64.0

Q ss_pred             EEeeeEEEeCCCCCC-CCCCCceEEEEeCCCeeeCCCeeeeeecCCCCcccCCcEEEeccCccccCCCcccccceeee--
Q psy15292          3 KLNTRQSFVHPQYSP-SDFRNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHASSLSSAIPTYVS--   79 (132)
Q Consensus         3 ~~~v~~~~~h~~y~~-~~~~~diall~l~~~~~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~~~~~~~~~~~~l~~~~--   79 (132)
                      ...+.+++.||.|.. ....+|+|||+|..++...  ..+++++..... .++.+.+.||+.................  
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~DiAll~l~~~~~~~--~~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~  152 (215)
T d1p3ca_          76 SANMTEFYVPSGYINTGASQYDFAVIKTDTNIGNT--VGYRSIRQVTNL-TGTTIKISGYPGDKMRSTGKVSQWEMSGSV  152 (215)
T ss_dssp             CEEEEEEECCHHHHHHCCGGGCCEEEEESSCHHHH--HCCCCBCCCSCC-TTCEEEEEECCHHHHHHHSSCCCEEEEEEC
T ss_pred             eEEEeEEEEecccccCCCccceEEEEEeccCCCcc--cccccccccccc-CCceeEEEcCCCCcCCCcccceeeEeeecc
Confidence            456788999998754 3457899999999887643  344455544433 6888999999874322111111111001  


Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC---CCceEEEEeecccC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL---VGKSATVAGWGRTR  125 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~---~g~~~~v~gwg~~~  125 (132)
                      .....+...+         -..+|-++++.++   .+....|..+|...
T Consensus       153 ~~~~~~~~~~---------~~~~~~G~SGgPl~~~~~~lvGi~s~g~~~  192 (215)
T d1p3ca_         153 TREDTNLAYY---------TIDTFSGNSGSAMLDQNQQIVGVHNAGYSN  192 (215)
T ss_dssp             CEECSSEEEE---------CCCCCTTCTTCEEECTTSCEEEECCEEEGG
T ss_pred             ccccccccee---------ecccCCCCccCeEECCCCEEEEEEEeccCC
Confidence            1111111111         1246778887766   36777887776443

>d1op0a_ b.47.1.2 (A:) Venom serine protease {Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Venom serine protease
species: Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]

Probab=97.75  E-value=3.2e-05  Score=46.82  Aligned_cols=48  Identities=33%  Similarity=0.684  Sum_probs=42.2

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++.++..+.++||+..... .+..+.+.||+....+.
T Consensus        83 ~~~DiaLl~L~~~v~~~~~i~picl~~~~~~-~~~~~~~~g~~~~~~~~  130 (234)
T d1op0a_          83 LDKDIMLIKLDKPISNSKHIAPLSLPSSPPS-VGSVCRIMGWGSITPVK  130 (234)
T ss_dssp             TSSCCEEEEESSCCCCBTTBCCCCCCSSCCC-TTCEEEEEESSCSSSSS
T ss_pred             cchhhhhhhcCCceeccceeecccccccCcc-cceEEEEeeeccccccc
Confidence            7899999999999999999999999987555 78999999999776554

>d1npma_ b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Neuropsin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.74  E-value=3.2e-05  Score=46.52  Aligned_cols=49  Identities=27%  Similarity=0.558  Sum_probs=42.3

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.+.+.+.++|++..... .+..+.++|||.....+.
T Consensus        85 ~~~dIAll~L~~~~~~~~~~~~i~l~~~~~~-~~~~~~~~g~g~~~~~~~  133 (225)
T d1npma_          85 HSHDIMLIRLQNSANLGDKVKPVQLANLCPK-VGQKCIISGWGTVTSPQE  133 (225)
T ss_dssp             CTTCCEEEEESSCCCCSSSSCCCEECSSCCC-TTCEEEEEESSCSSSSSC
T ss_pred             chhhhhhhhcccccccccccccccccccccc-CCceEEEeccceecCCCC
Confidence            6789999999999999999999999987655 788999999998765443

>d1eq9a_ b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Red fire ant (Solenopsis invicta) [TaxId: 13686]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Red fire ant (Solenopsis invicta) [TaxId: 13686]

Probab=97.70  E-value=3.6e-05  Score=46.09  Aligned_cols=50  Identities=32%  Similarity=0.656  Sum_probs=43.7

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.+++.+.++|++.......+..|.+.||+.+..++.
T Consensus        84 ~~~diAll~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~~g~~~~~~~~~  133 (222)
T d1eq9a_          84 LRNDVALVHLTNPIKFNDLVQPIKLSTNDEDLESNPCTLTGWGSTRLGGN  133 (222)
T ss_dssp             TBCCCEEEEESSCCCCBTTBCCCEECSCCTTCTTSEEEEEECCCSSTTCC
T ss_pred             cccceehhhccCCcccccccccccccccccccccceeEEeeeeeecCCCC
Confidence            77999999999999999999999999876655788999999998876543

>d1fuja_ b.47.1.2 (A:) Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Myeloblastin, PR3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=3.9e-05  Score=45.94  Aligned_cols=50  Identities=26%  Similarity=0.456  Sum_probs=43.4

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.+++.+.++||+...... .+..+.+.||+.....+.
T Consensus        88 ~~~diAll~L~~~~~~~~~v~picl~~~~~~~~~~~~~~~~G~~~~~~~~~  138 (221)
T d1fuja_          88 KLNDILLIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDP  138 (221)
T ss_dssp             TBCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSCSSSC
T ss_pred             CccEEEEEEccccccccceEEEEEecccccccCCCceEEEecccccccccc
Confidence            67899999999999999999999999875544 789999999998876554

>d1fi8a_ b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.66  E-value=4.4e-05  Score=45.97  Aligned_cols=50  Identities=36%  Similarity=0.653  Sum_probs=43.3

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.+++.+.++|++...... .+..|.+.|||.......
T Consensus        86 ~~~diall~l~~~i~~~~~v~picl~~~~~~~~~~~~~~~~g~g~~~~~~~  136 (227)
T d1fi8a_          86 ISNDIMLLKLKSKAKRSSAVKPLNLPRRNVKVKPGDVCYVAGWGKLGPMGK  136 (227)
T ss_dssp             TBSCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEESCBSSTTCC
T ss_pred             ccchhhhhhccCceeeeeeEEEEEecccCcccCCCCEEEEEeeccccCCCC
Confidence            67899999999999999999999999875444 789999999998776543

>d1ao5a_ b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein-13
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.61  E-value=6.2e-05  Score=45.56  Aligned_cols=48  Identities=25%  Similarity=0.560  Sum_probs=41.3

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++.+.+.+.++|++..... .+..|.++|||....+.
T Consensus        93 ~~~DiAll~L~~~i~~~~~~~~i~lp~~~~~-~~~~~~~~g~~~~~~~~  140 (237)
T d1ao5a_          93 FSDDLMLLRLSKPADITDVVKPIALPTKEPK-PGSKCLASGWGSITPTR  140 (237)
T ss_dssp             CTTCCEEEEESSCCCCCSSSCCCCCCCSCCC-TTCEEEEEESCCSSCC-
T ss_pred             cccceeeeccCcccccccccceeccCCCCCc-ccceEEEeeeeeecccc
Confidence            5689999999999999999999999987655 67899999999776553

>d1fq3a_ b.47.1.2 (A:) Granzyme B {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=3e-05  Score=46.70  Aligned_cols=49  Identities=31%  Similarity=0.697  Sum_probs=42.4

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++.+++.+.++|++...... .+..+.+.|||.+...+
T Consensus        85 ~~~DiAll~L~~~i~~~~~v~~~~l~~~~~~~~~~~~~~~~G~~~~~~~~  134 (227)
T d1fq3a_          85 FSNDIMLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLG  134 (227)
T ss_dssp             TTTCCEEEEESSCCCCCSSCCCCCCCCSSCCCCTTCEEECCCSCCSTTTS
T ss_pred             CCcchhhhhcccccccceeEEEEeecccccccCCCCEEEEEeeccccCcc
Confidence            67899999999999999999999999865444 79999999999886554

>d1hj8a_ b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon (Salmo salar) [TaxId: 8030]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: North atlantic salmon (Salmo salar) [TaxId: 8030]

Probab=97.60  E-value=6.7e-05  Score=45.01  Aligned_cols=48  Identities=38%  Similarity=0.679  Sum_probs=41.8

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++.+++.+.++||+..... .+..+.+.|||......
T Consensus        81 ~~~diALl~l~~~v~~~~~~~picl~~~~~~-~~~~~~~~g~~~~~~~~  128 (222)
T d1hj8a_          81 IDNDIMLIKLSKPATLNTYVQPVALPTSCAP-AGTMCTVSGWGNTMSST  128 (222)
T ss_dssp             TBSCCEEEEESSCCCCSSSCCCCBCCSSCCC-TTCEEEEEESSCCCCSS
T ss_pred             cCCcEEEEecccceeeeceeEEEECCCcCCC-CCceEEEEecccccccc
Confidence            5789999999999999999999999987554 78999999999876543

>d1a7sa_ b.47.1.2 (A:) Heparin binding protein, HBP {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Heparin binding protein, HBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.55  E-value=9e-05  Score=44.43  Aligned_cols=50  Identities=30%  Similarity=0.598  Sum_probs=42.6

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.+...+.++|++...... .+..+.++|||....+..
T Consensus        86 ~~~DIAll~L~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~  136 (225)
T d1a7sa_          86 NLNDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGR  136 (225)
T ss_dssp             TBSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESCCSSTTCC
T ss_pred             cccccchhhcCCcccccccceeEEeeccccccCCCceeEeccccccccccc
Confidence            67899999999999999999999998765444 789999999998876543

>d2z7fe1 b.47.1.2 (E:16-243) Elastase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=9.1e-05  Score=44.16  Aligned_cols=50  Identities=20%  Similarity=0.426  Sum_probs=43.6

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.++..+.++|++.....+ .+..|.+.|||....++.
T Consensus        85 ~~~diall~l~~~~~~~~~~~pi~l~~~~~~~~~~~~~~~~g~~~~~~~~~  135 (218)
T d2z7fe1          85 LLNDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRG  135 (218)
T ss_dssp             TBSCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCEEEEEESSBCSSSCC
T ss_pred             ccceEEEeeccccceeeeeeeeeeeccCccccCCCcEEEEeccceeecccc
Confidence            67899999999999999999999999865554 788999999998887654

>d1gdna_ b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5507]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Mold (Fusarium oxysporum) [TaxId: 5507]

Probab=97.54  E-value=0.00011  Score=44.00  Aligned_cols=49  Identities=35%  Similarity=0.491  Sum_probs=42.4

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++.+.+.+.++|++...... .+..|.+.|||.+....
T Consensus        81 ~~~DiAll~L~~~v~~~~~~~~i~~~~~~~~~~~~~~~~~~g~g~~~~~~  130 (224)
T d1gdna_          81 NNNDLAILKLSTSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSEGG  130 (224)
T ss_dssp             TBSCCEEEEESSCCCCBTTBCCCCBCCTTCCCCTTCEEEEEESCCSSTTC
T ss_pred             ccceeEEEeeccccccccccceeeccccccccccceeeeeeccCccccCC
Confidence            67899999999999999999999999865544 79999999999876543

>d1orfa_ b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=7.4e-05  Score=45.05  Aligned_cols=50  Identities=24%  Similarity=0.511  Sum_probs=43.3

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.+...+.++|++.....+ .+..|.+.|||.+..++.
T Consensus        83 ~~~diAll~l~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~g~g~~~~~~~  133 (232)
T d1orfa_          83 REGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHNSAS  133 (232)
T ss_dssp             CTTCCEEEEESSCCCCSSSSCCCCCCSSCCCCCTTCEEEEEESSCSSSSSC
T ss_pred             cCcceeEeeeccceeeeeeEeeeeecccccccccCceeeeccccccCCccc
Confidence            68899999999999999999999999765544 799999999998876653

>d1pytd_ b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.53  E-value=7.2e-05  Score=45.66  Aligned_cols=56  Identities=34%  Similarity=0.566  Sum_probs=46.1

Q ss_pred             cceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCCC
Q psy15292         74 IPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        74 ~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~~  129 (132)
                      |..+..  ..+|+++.++..++.++..+.++|++...... .+..|.+.||+.+..++.
T Consensus        94 h~~y~~~~~~~diali~l~~pi~~~~~~~pi~l~~~~~~~~~~~~~~~~g~~~~~~~~~  152 (251)
T d1pytd_          94 HEKWNSFLVRNDIALIKLAETVELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTNGP  152 (251)
T ss_dssp             CTTCBTTTTBSCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEECBCCCSSCCSC
T ss_pred             eeeecccccCCceeeeecCCCcccCceeEEEEeeccccCCCCceeEEEecCccccCCCc
Confidence            344444  77999999999999999999999999875444 789999999998886654

>d1azza_ b.47.1.2 (A:) Crab collagenase {Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Crab collagenase
species: Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]

Probab=97.50  E-value=9.8e-05  Score=44.38  Aligned_cols=55  Identities=36%  Similarity=0.566  Sum_probs=45.5

Q ss_pred             cceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCCC
Q psy15292         74 IPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        74 ~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~~  129 (132)
                      +..+..  ..+|++++++..++.++..+.++|++..... .+..+.++|||.......
T Consensus        76 ~~~y~~~~~~~diAll~l~~~~~~~~~~~pi~l~~~~~~-~~~~~~~~g~g~~~~~~~  132 (226)
T d1azza_          76 HENYNSFVISNDIAVIRLPVPVTLTAAIATVGLPSTDVG-VGTVVTPTGWGLPSDSAL  132 (226)
T ss_dssp             CTTCBTTTTBSCCEEEECSSCCCCCSSSCCCBCCSSCCC-TTCEEEEEESSCSSTTCS
T ss_pred             ccccccccccchhhhhhcCCccceeeccccccccccccc-cccceeeecccccCCCcC
Confidence            344444  6899999999999999999999999997655 788999999998876543

>d1tona_ b.47.1.2 (A:) Tonin {Rat (Rattus rattus) [TaxId: 10117]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Tonin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=97.48  E-value=0.00012  Score=44.06  Aligned_cols=49  Identities=27%  Similarity=0.478  Sum_probs=42.5

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.+++.+.++|++..... ....+.+.|||.+..+..
T Consensus        91 ~~~Diall~L~~~v~~~~~i~~i~l~~~~~~-~~~~~~~~g~g~~~~~~~  139 (235)
T d1tona_          91 HSNDLMLLHLSEPADITGGVKVIDLPTKEPK-VGSTCLASGWGSTNPSEM  139 (235)
T ss_dssp             STTCCEEEEESSCCCCCSSCCCCCCCCSCCC-TTCEEEEEESSCSSSSSC
T ss_pred             cccceeEEEecCccccCCccccccccccccc-ccceeEEEEccccccccc
Confidence            6789999999999999999999999987655 678899999998876554

>d2f91a1 b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]

Probab=97.46  E-value=0.00011  Score=44.38  Aligned_cols=49  Identities=31%  Similarity=0.735  Sum_probs=42.7

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++...+.++..+.++|++..... .+..|.+.|||.+...+.
T Consensus        93 ~~~diAll~l~~~v~~~~~~~~i~~~~~~~~-~~~~~~~~g~g~~~~~~~  141 (237)
T d2f91a1          93 LDNDISLLKLSGSLTFNDNVAPIALPEQGHT-ATGDVIVTGWGTTSEGGN  141 (237)
T ss_dssp             CTTCCEEEEESSCCCCBTTBCCCBCCCTTCC-CCSEEEEEESCCSSTTCC
T ss_pred             cccceeeeccccccccCCceeeeeccccCcc-cccceeeccccccCCCCc
Confidence            6789999999999999999999999987655 678999999999876543

>d2qy0b1 b.47.1.2 (B:447-686) Complement C1R protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1R protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=0.00013  Score=44.30  Aligned_cols=50  Identities=26%  Similarity=0.605  Sum_probs=43.0

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.+++.+.++|++...... .+..+.+.|||.......
T Consensus        91 ~~~DiAll~L~~pi~~~~~v~pi~l~~~~~~~~~~~~~~~~g~g~~~~~~~  141 (240)
T d2qy0b1          91 FEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIA  141 (240)
T ss_dssp             CTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCCCSSSCC
T ss_pred             cCCCceEEecCCccccccccceEEecccccccccCceeeeccccccccccc
Confidence            45799999999999999999999999876555 689999999999876543

>d1eufa_ b.47.1.2 (A:) Duodenase {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Duodenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.44  E-value=0.00012  Score=43.82  Aligned_cols=50  Identities=28%  Similarity=0.579  Sum_probs=42.7

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.++..+.++|++...... .+..+.+.|||.......
T Consensus        85 ~~~DiAll~L~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~g~g~~~~~~~  135 (224)
T d1eufa_          85 LANDIMLLKLTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLGVNMP  135 (224)
T ss_dssp             CTTCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEESCBSSTTCC
T ss_pred             ccccceeeeccceeEEeeeEeeeeeecccccccCCceEEEecccceecccc
Confidence            57899999999999999999999999865444 789999999998776543

>d1gvza_ b.47.1.2 (A:) Prostate specific antigen (PSA kallikrein) {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Prostate specific antigen (PSA kallikrein)
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.43  E-value=0.00013  Score=44.01  Aligned_cols=47  Identities=26%  Similarity=0.493  Sum_probs=41.1

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~  127 (132)
                      ..+|++++++..++.+++.+.++|++..... .+..+.+.|||.....
T Consensus        93 ~~~Diali~L~~pv~~~~~v~p~~l~~~~~~-~~~~~~~~g~g~~~~~  139 (237)
T d1gvza_          93 ISHDLMLLRLAQPARITDAVKILDLPTQEPK-LGSTCYTSGWGLISTF  139 (237)
T ss_dssp             CTTCCEEEEESSCCCCBTTBCCCCCCSSCCC-TTCEEEEEEEECSCTT
T ss_pred             cccceEEEEECCceecccccccccccccccc-cceeEEEEeeeeeccc
Confidence            5789999999999999999999999987555 7889999999987643

>d1hj9a_ b.47.1.2 (A:) Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.38  E-value=0.00017  Score=43.09  Aligned_cols=48  Identities=27%  Similarity=0.693  Sum_probs=41.9

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++.+...+.++|++..... .+..|.+.|||.+..+.
T Consensus        81 ~~~diAll~l~~~~~~~~~~~p~cl~~~~~~-~~~~~~~~g~~~~~~~~  128 (223)
T d1hj9a_          81 LNNDIMLIKLKSAASLNSRVASISLPTSCAS-AGTQCLISGWGNTKSSG  128 (223)
T ss_dssp             CTTCCEEEEESSCCCCBTTBCCCBCCSSCCC-TTCEEEEEESSCCCSSS
T ss_pred             ccchhhhhhcccceeeeeeeecccccccccc-ccceEEEEeeccccCCC
Confidence            6789999999999999999999999987655 67889999999876553

>d1elta_ b.47.1.2 (A:) Elastase {Salmon (Salmo salar) [TaxId: 8030]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Salmon (Salmo salar) [TaxId: 8030]

Probab=97.37  E-value=0.00018  Score=43.31  Aligned_cols=50  Identities=22%  Similarity=0.486  Sum_probs=42.5

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.++..+.++||+.+.... .+..+.+.|||....+..
T Consensus        90 ~~~diall~l~~~~~~~~~~~picL~~~~~~~~~~~~~~~~g~g~~~~~~~  140 (236)
T d1elta_          90 GGYDIALLRLNTQASLNSAVQLAALPPSNQILPNNNPCYITGWGKTSTGGP  140 (236)
T ss_dssp             GCCCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCCEEEEESCCSSTTCC
T ss_pred             cCceEEEeeccCcceeecccceeecCchhcccCCCceEEEecccccccCcc
Confidence            46799999999999999999999999875554 688999999998776543

>d1z8ga1 b.47.1.2 (A:163-417) Hepsin, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepsin, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=0.00022  Score=43.58  Aligned_cols=50  Identities=42%  Similarity=0.729  Sum_probs=42.3

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++.+++.+++.+.++|++...... .+..|.+.||+....++.
T Consensus        92 ~~~DiAll~L~~~v~~~~~~~p~~l~~~~~~~~~~~~~~~~G~~~~~~~~~  142 (255)
T d1z8ga1          92 NSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQ  142 (255)
T ss_dssp             CTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSC
T ss_pred             ccccEEEEecCCccccCcccccceecccCcccCCCcEEEeeccccccCCCc
Confidence            45899999999999999999999999865433 799999999998776543

>d1autc_ b.47.1.2 (C:) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=0.00022  Score=43.03  Aligned_cols=50  Identities=32%  Similarity=0.738  Sum_probs=41.6

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCC-----CCCCCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQT-----VKLVGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~-----~~~~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.++..+.++||+...     ....+..|.+.|||.......
T Consensus        85 ~~~DiAli~L~~~v~~~~~v~picL~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~  139 (240)
T d1autc_          85 TDNDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQETLVTGWGYHSSREK  139 (240)
T ss_dssp             TBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTTTSTTCEEEEEECCCCCSCCS
T ss_pred             cccceeEEEeCCcccCCcccccceeccCcccccccccCCCeEEEEeeccccCCCc
Confidence            67899999999999999999999999752     122688999999998776543

>d1bioa_ b.47.1.2 (A:) Factor D {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=0.00028  Score=42.04  Aligned_cols=50  Identities=26%  Similarity=0.527  Sum_probs=42.9

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.+++.+.++|++...... .+..+.+.|||.+...+.
T Consensus        86 ~~~diAll~l~~~~~~~~~v~p~~l~~~~~~~~~~~~~~~~g~~~~~~~~~  136 (228)
T d1bioa_          86 IDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGR  136 (228)
T ss_dssp             CTTCCEEEEESSCCCCBTTBCCCCBCCSCCCCCTTCEEEEEESSCCSTTCC
T ss_pred             cccceehhhccccceeeeEEeeecccccccccccCceEEEecceeecCCCC
Confidence            67899999999999999999999999865443 799999999998876543

>d3rp2a_ b.47.1.2 (A:) Chymase II (mast cell proteinase II) {Rat (Rattus rattus) [TaxId: 10117]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase II (mast cell proteinase II)
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=97.23  E-value=0.00013  Score=43.76  Aligned_cols=49  Identities=29%  Similarity=0.447  Sum_probs=42.6

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++.++..+.++|++...... .+..+.+.|||....++
T Consensus        86 ~~~diall~L~~~v~~~~~~~p~~l~~~~~~~~~~~~~~~~g~~~~~~~~  135 (224)
T d3rp2a_          86 NLHDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTGVRD  135 (224)
T ss_dssp             CCSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSEEETTE
T ss_pred             cccceeeeeecceeEeccccceEEecccccccCCCcEEEEeeeeeeecCC
Confidence            78999999999999999999999999875544 79999999999877654

>d1mzaa_ b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme K
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.16  E-value=0.0005  Score=41.44  Aligned_cols=47  Identities=28%  Similarity=0.513  Sum_probs=41.0

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCc
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRH  126 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~  126 (132)
                      ..+|++++++..++.+.+.+.++||+..........+.+.|||....
T Consensus        89 ~~~diAll~l~~~~~~~~~~~picL~~~~~~~~~~~~~~~g~g~~~~  135 (240)
T d1mzaa_          89 QSNDIMLVKLQTAAKLNKHVKMLHIRSKTSLRSGTKCKVTGWGATDP  135 (240)
T ss_dssp             SSSCCEEEEESSCCCCBTTBCCCCBCSSCCCCTTCEEEEEECCCSST
T ss_pred             cCcceEEEeecceeeeeeccccccccccccccceeeEEEEEeccccC
Confidence            67899999999999999999999999876555677899999998764

>d1sgfa_ b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: 7S NGF protease subunits
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.14  E-value=0.00023  Score=42.69  Aligned_cols=47  Identities=30%  Similarity=0.620  Sum_probs=35.8

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~  127 (132)
                      ..+|++++++..++.+++.+.++||+..... ....+.+.|||.+...
T Consensus        84 ~~~Diall~L~~~v~~~~~v~pi~l~~~~~~-~~~~~~~~g~~~~~~~  130 (228)
T d1sgfa_          84 YSNDLMLLRLSKPADITDVVKPITLPTEEPK-LGSTCLASGWGSTTPI  130 (228)
T ss_dssp             CTTCCEEEEESSCCCCCSSCCCCCCCCSCCC-TTCEEEEC-------C
T ss_pred             cccceeEEeeccccccCCceeeEecCccccc-cCcceEEEeeeeccCC
Confidence            6789999999999999999999999987655 6788999999987644

>d1elva1 b.47.1.2 (A:410-668) Complement C1S protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1S protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.13  E-value=0.00044  Score=42.21  Aligned_cols=50  Identities=30%  Similarity=0.718  Sum_probs=41.4

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCC---CCCCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTV---KLVGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~---~~~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.+++.+.++|++....   ...+..|.+.||+.+.....
T Consensus       102 ~~~DIAllkL~~~~~~~~~v~pic~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  154 (259)
T d1elva1         102 FDNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDR  154 (259)
T ss_dssp             CTTCCEEEEESSCCCCBTTBCCCBCCCSSGGGCCCTTCEEEEEESCCCSSCSS
T ss_pred             cccceeeeecccceehhcccCceeeccCccccccccceEEEEecccccccccc
Confidence            568999999999999999999999987543   22788999999998765543

>d1m9ua_ b.47.1.2 (A:) Elastase {Worm (Eisenia fetida) [TaxId: 6396]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Worm (Eisenia fetida) [TaxId: 6396]

Probab=97.09  E-value=0.00067  Score=40.73  Aligned_cols=50  Identities=26%  Similarity=0.572  Sum_probs=42.5

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.++..+.++|++...... .+..+.+.|||.....+.
T Consensus        90 ~~~diall~l~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~g~~~~~~~~~  140 (241)
T d1m9ua_          90 YSNDIAILHLATSISLGGNIQAAVLPANNNNDYAGTTCVISGWGRTDGTNN  140 (241)
T ss_dssp             TTTCCEEEEESSCCCCCSSCCCCCCCSCSSCCCTTCEEEEEESSCSSSSSC
T ss_pred             ccccceeeeccceeeeeeceeeeeeeccccccccceEEEEeecccccCCCC
Confidence            56799999999999999999999999765443 799999999998876544

>d1xx9a_ b.47.1.2 (A:) Coagulation factor XI {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.00065  Score=40.84  Aligned_cols=49  Identities=27%  Similarity=0.570  Sum_probs=42.1

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++.+.+.+.++|++...... ....+.+.|||....+.
T Consensus        90 ~~~diAll~L~~~v~~~~~~~pi~~~~~~~~~~~~~~~~~~G~~~~~~~~  139 (237)
T d1xx9a_          90 SGYDIALLKLETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRD  139 (237)
T ss_dssp             TSCCCEEEEESSCCCCBTTBCCCBCCCTTCTTCCCSCEEEEESCCSSTTC
T ss_pred             ccceeEEEEeccccccccccceEEecccccccccccccEEEEeecccccc
Confidence            77899999999999999999999999865554 67889999999876654

>d1t32a1 b.47.1.2 (A:16-244) Cathepsin G {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Cathepsin G
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.00071  Score=40.30  Aligned_cols=49  Identities=37%  Similarity=0.649  Sum_probs=42.8

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|+++.++..++.+.+.+.++|++...... .+..+...|||......
T Consensus        85 ~~~diaL~~l~~~~~~~~~~~pi~l~~~~~~~~~~~~~~~~g~g~~~~~~  134 (224)
T d1t32a1          85 IQNDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMRR  134 (224)
T ss_dssp             TBTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESCCSSSSC
T ss_pred             cccceeEEeeccccccCcccCccccccccccCCCCCEEEEecccccccCC
Confidence            67899999999999999999999999876555 79999999999877554

>d1brup_ b.47.1.2 (P:) Elastase {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.99  E-value=0.00092  Score=40.10  Aligned_cols=49  Identities=35%  Similarity=0.582  Sum_probs=41.8

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      .++|++++++...+.++..+.++|++...... .+..+.+.|||....+.
T Consensus        90 ~d~~iall~l~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~g~g~~~~~~  139 (241)
T d1brup_          90 NGNDIALLKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNG  139 (241)
T ss_dssp             GCCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSTTS
T ss_pred             CCceEEEEecccccccccceeeeeeccccccCCCceeEEEEeeeccCCCC
Confidence            56789999999999999999999999865544 79999999999877543

>d1si5h_ b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepatocyte growth factor, HGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.0019  Score=38.76  Aligned_cols=49  Identities=24%  Similarity=0.462  Sum_probs=41.1

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      ..+|++++++..++.+.+.+.++|++...... .+..+.+.||+......
T Consensus        81 ~~~DIAll~L~~~v~~~~~v~picl~~~~~~~~~~~~~~~~g~~~~~~~~  130 (234)
T d1si5h_          81 EGSDLVLMKLARPAVLDDFVSTIDLPNYGSTIPEKTSCSVYGWGYTGLIN  130 (234)
T ss_dssp             STTCEEEEEESSCCCCSSSCCCCBCCCTTCCCCTTCEEEEEESSCCCCSS
T ss_pred             cccceEEEeeccCccccccccccccccccccCCcceeEEEeccccccccc
Confidence            66899999999999999999999999875554 68888999998776543

>d2fpza1 b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: beta-Tryptase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=0.00081  Score=40.61  Aligned_cols=55  Identities=27%  Similarity=0.578  Sum_probs=44.8

Q ss_pred             cceeee--ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCC
Q psy15292         74 IPTYVS--ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAG  128 (132)
Q Consensus        74 ~l~~~~--~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~  128 (132)
                      |+.+..  ..+|++++++..++.+++.+.++|++...... .+..+.+.+||....+.
T Consensus        80 hp~~~~~~~~~diAli~L~~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~  137 (243)
T d2fpza1          80 HPQFYTAQIGADIALLELEEPVKVSSHVHTVTLPPASETFPPGMPCWVTGWGDVDNDE  137 (243)
T ss_dssp             CTTCSCTTTSCCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCEEEEEESSCSBTTB
T ss_pred             cccccccccccchhhhcccCccccceeEEEeecCchhhccCCCceeEEEecccccCCC
Confidence            344434  67899999999999999999999999765444 78899999999887654

>d1eaxa_ b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Matriptase MTSP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.001  Score=40.13  Aligned_cols=50  Identities=34%  Similarity=0.765  Sum_probs=42.5

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.+...+.++|++...... .+..+...|||.......
T Consensus        94 ~~~diAll~L~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~g~~~~~~~~~  144 (241)
T d1eaxa_          94 FDYDIALLELEKPAEYSSMVRPICLPDASHVFPAGKAIWVTGWGHTQYGGT  144 (241)
T ss_dssp             CTTCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSBSSTTSC
T ss_pred             cCCcccccccCCceecCcccceeeccccccccccceeEEEeccCCcccccc
Confidence            56899999999999999999999999865444 788999999998876544

>d1nn6a_ b.47.1.2 (A:) Chymase (mast cell protease I) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase (mast cell protease I)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.001  Score=39.65  Aligned_cols=50  Identities=26%  Similarity=0.464  Sum_probs=42.6

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.++..+.++|++...... .+..|...||+.+...+.
T Consensus        84 ~~~diall~l~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~g~~~~~~~~~  134 (224)
T d1nn6a_          84 LHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKP  134 (224)
T ss_dssp             CTTCCEEEEESSCCCCCSSCCCCCCCSCCCCCCTTCEEEEEECCCCSSSCC
T ss_pred             cccchhhhcccCCcccccccccccccccccccCCCceeeeccccccccCCC
Confidence            67899999999999999999999999865444 789999999998876543

>d1fona_ b.47.1.2 (A:) Procarboxypeptidase A-S6 subunit III (zymogen E) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Procarboxypeptidase A-S6 subunit III (zymogen E)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.84  E-value=0.00084  Score=40.22  Aligned_cols=50  Identities=26%  Similarity=0.477  Sum_probs=42.5

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~~  129 (132)
                      .++|++++++..++.+++.+.++|++...... .+..+.+.||+....++.
T Consensus        82 ~~~diAll~l~~~~~~~~~~~pic~~~~~~~~~~~~~~~~~g~~~~~~~~~  132 (232)
T d1fona_          82 CGNDIALVKLSRSAQLGDKVQLANLPPAGDILPNEAPCYISGWGRLYTGGP  132 (232)
T ss_dssp             GCCCCEEEECSSCCCCTTSCCCCBCCCTTCCCCTTCCCEEEECTTCCCSSS
T ss_pred             cccceeeeecccceEEeecceeeecCcccccCCCCceeEeeccccccCCCC
Confidence            45899999999999999999999999875544 688999999998876543

>d1q3xa1 b.47.1.2 (A:445-686) Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.73  E-value=0.00093  Score=40.29  Aligned_cols=50  Identities=36%  Similarity=0.711  Sum_probs=40.9

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC---CCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL---VGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~---~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.++..+.++|++......   .+..+...|||....+..
T Consensus        85 ~~~DiAll~L~~~~~~~~~v~pic~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  137 (242)
T d1q3xa1          85 FDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFL  137 (242)
T ss_dssp             CTTCCEEEEESSCCCCBTTBCCCBCCCGGGGGGSSTTCEEEEEESSCCTTSSC
T ss_pred             cCccccccccCCCccccccEEEEeccccccccccccceeeeeeeccccccCcc
Confidence            57899999999999999999999998753321   688899999988766543

>d2bz6h1 b.47.1.2 (H:16-257) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.41  E-value=0.001  Score=40.24  Aligned_cols=50  Identities=34%  Similarity=0.803  Sum_probs=41.2

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCC---CCC-CCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQT---VKL-VGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~---~~~-~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.++..+.++||+...   ... .+..+.+.|||.+..+..
T Consensus        87 ~~~DiAll~L~~~v~~~~~i~picl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (254)
T d2bz6h1          87 TNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGA  140 (254)
T ss_dssp             CSSCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSSTTSC
T ss_pred             cccceeEEEecCcccccceEeeeecCccccccccccCCceEEEeccCccCCCCc
Confidence            67899999999999999999999999742   122 678899999999876543

>d1agja_ b.47.1.1 (A:) Epidermolytic (exfoliative) toxin A {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Epidermolytic (exfoliative) toxin A
species: Staphylococcus aureus [TaxId: 1280]

Probab=96.27  E-value=0.01  Score=35.80  Aligned_cols=44  Identities=20%  Similarity=0.253  Sum_probs=31.6

Q ss_pred             CCCceEEEEeCCCe---eeCCCeeeeeecCCCCcccCCcEEEeccCc
Q psy15292         20 FRNDVALIKIDKDV---VFKQHIIPVCLPDQTVKLVGKSATVAGWGR   63 (132)
Q Consensus        20 ~~~diall~l~~~~---~~~~~~~~~cl~~~~~~~~g~~~~~~GwG~   63 (132)
                      ..+|+|||+|..+.   .+...+.++.|........|+...+.||..
T Consensus       117 ~~~D~All~l~~~~~~~~~~~~~~~~~l~~s~~~~~G~~v~~~GyP~  163 (242)
T d1agja_         117 AGVDLALIRLKPDQNGVSLGDKISPAKIGTSNDLKDGDKLELIGYPF  163 (242)
T ss_dssp             TTSCCEEEEECCCTTSCCHHHHSCCCEECCSTTCCTTCEEEEEECCT
T ss_pred             CcCcEEEEEeccccccccccccCcceeecccccccCCcEEEEEEcCC
Confidence            35799999997653   334567788887654444788999999954

>d1gvkb_ b.47.1.2 (B:) Elastase {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.18  E-value=0.0063  Score=36.21  Aligned_cols=50  Identities=26%  Similarity=0.499  Sum_probs=41.6

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.+.+.+.++|++...... .+....+.||+.......
T Consensus        90 ~~~diAll~l~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~g~~~~~~~~~  140 (240)
T d1gvkb_          90 AGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQ  140 (240)
T ss_dssp             GCCCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCCEEEEESCBSSTTCC
T ss_pred             cCcceeeecccCcccccccccceeeccCccccccccceeEecccccccccc
Confidence            67899999999999999999999999865443 677888999998775443

>d2p3ub1 b.47.1.2 (B:16-243) Coagulation factor Xa, protease domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.98  E-value=0.002  Score=38.32  Aligned_cols=50  Identities=28%  Similarity=0.701  Sum_probs=41.1

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCC----CCCCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTV----KLVGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~----~~~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.+++.+.++|++....    ......+.+.+||.....+.
T Consensus        85 ~~~diAll~L~~pv~~~~~v~pi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (233)
T d2p3ub1          85 YDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGR  138 (233)
T ss_dssp             CTTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHTTTSSEEEEEESCBSSTTSC
T ss_pred             cccceeeeecccceeecccccccccCCcccccccccccceEEEecCCccccCCC
Confidence            668999999999999999999999998532    11577889999998876654

>d1rjxb_ b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Plasmin(ogen), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.76  E-value=0.012  Score=35.14  Aligned_cols=48  Identities=29%  Similarity=0.668  Sum_probs=38.4

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC-CCceEEEEeecccCcC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL-VGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~-~g~~~~v~gwg~~~~~  127 (132)
                      ..+|+++.++..++.+++.+.++|++...... .+..+...|||.....
T Consensus        99 ~~~DiAl~~L~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~g~~~~~~~  147 (247)
T d1rjxb_          99 TRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGT  147 (247)
T ss_dssp             SSCCEEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCC----
T ss_pred             ccchhhhhhhhcccccccccccccccccccccCCCceeeecccccccCC
Confidence            78999999999999999999999998764443 7888999999876543

>d1rfna_ b.47.1.2 (A:) Coagulation factor IXa, protease domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor IXa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.52  E-value=0.005  Score=36.59  Aligned_cols=50  Identities=34%  Similarity=0.707  Sum_probs=40.9

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCC---CCCCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTV---KLVGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~---~~~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.++..+.++|++....   ...+..+.+.||+....+..
T Consensus        86 ~~~diAllkL~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~  138 (235)
T d1rfna_          86 YNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGR  138 (235)
T ss_dssp             STTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHHTTSEEEEEESCBSSTTSC
T ss_pred             cCceEEEEEeCCCccCCCccceeeeccccccccccccceEEEecccccccccc
Confidence            468999999999999999999999997422   22678899999998876643

>d2hlca_ b.47.1.2 (A:) HL collagenase {Common cattle grub (Hypoderma lineatum) [TaxId: 7389]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: HL collagenase
species: Common cattle grub (Hypoderma lineatum) [TaxId: 7389]

Probab=95.33  E-value=0.011  Score=35.09  Aligned_cols=47  Identities=40%  Similarity=0.586  Sum_probs=36.4

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCC---CCceEEEEeecccCcC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKL---VGKSATVAGWGRTRHA  127 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~---~g~~~~v~gwg~~~~~  127 (132)
                      ..+|++++++.. ..+.+.+.++||+......   .+..+.+.|||.....
T Consensus        85 ~~~DiALl~L~~-~~~~~~v~pi~l~~~~~~~~~~~~~~~~~~g~~~~~~~  134 (230)
T d2hlca_          85 YLNDVALIKIPH-VEYTDNIQPIRLPSGEELNNKFENIWATVSGWGQSNTD  134 (230)
T ss_dssp             TBTCCEEEECSC-CCCCSSCCCCBCCCGGGGGCCCTTCEEEEEESSCCSSC
T ss_pred             cccceeEEEeec-ccccccceeEEeeccccccccccceeEEEEeecccccc
Confidence            678999999975 4678889999998743222   6888999999976653

>d1arba_ b.47.1.1 (A:) Achromobacter protease {Achromobacter lyticus, strain m497-1 [TaxId: 224]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Achromobacter protease
species: Achromobacter lyticus, strain m497-1 [TaxId: 224]

Probab=94.76  E-value=0.0085  Score=36.54  Aligned_cols=26  Identities=4%  Similarity=-0.175  Sum_probs=18.9

Q ss_pred             eeecCCCCCCC---CCceEEEEeecccCc
Q psy15292        101 PVCLPDQTVKL---VGKSATVAGWGRTRH  126 (132)
Q Consensus       101 ~icl~~~~~~~---~g~~~~v~gwg~~~~  126 (132)
                      ..|-++++.++   .|....+..||....
T Consensus       188 ~~c~GDSGGPL~~~~g~~vGvvsgg~s~c  216 (263)
T d1arba_         188 VTEPGSSGSPIYSPEKRVLGQLHGGPSSC  216 (263)
T ss_dssp             CCCTTCTTCEEECTTSCEEEEEEECSCCT
T ss_pred             cccCCCCcceEEecCCCEEEEEEEEEeCC
Confidence            36778888777   477778888886443

>d1rrka1 b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.50  E-value=0.01  Score=36.72  Aligned_cols=28  Identities=43%  Similarity=0.755  Sum_probs=25.6

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQ  107 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~  107 (132)
                      ..+|++++++..++.+++.+.|||||..
T Consensus        96 ~~~DIALl~L~~~~~~s~~v~PIcLp~~  123 (287)
T d1rrka1          96 YDYDVALIKLKNKLKYGQTIRPICLPCT  123 (287)
T ss_dssp             CTTCCEEEEESSCCCCBTTBCCCBCTTB
T ss_pred             ccccEEEEecccCccccceEEEEecCCc
Confidence            4689999999999999999999999864

>d1os8a_ b.47.1.1 (A:) Trypsin {Streptomyces griseus, strain k1 [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Trypsin
species: Streptomyces griseus, strain k1 [TaxId: 1911]

Probab=92.89  E-value=0.11  Score=30.43  Aligned_cols=45  Identities=31%  Similarity=0.412  Sum_probs=31.9

Q ss_pred             ccCCeEEEEeccceeeccCeeeeecCCCCCCCCCceEEEEeecccCcCCC
Q psy15292         80 ISNDVALIKIDKDVVFKQHIIPVCLPDQTVKLVGKSATVAGWGRTRHAGH  129 (132)
Q Consensus        80 ~~~d~c~~~~~~~~~~~~~v~~icl~~~~~~~~g~~~~v~gwg~~~~~~~  129 (132)
                      ..+|++++++..++.++     +|+........+..+.+.||+.+.....
T Consensus        79 ~~~DIAllkL~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (223)
T d1os8a_          79 TGKDWALIKLAQPINQP-----TLKIATTTAYNQGTFTVAGWGANREGGS  123 (223)
T ss_dssp             SSCCCEEEEESSCCCSC-----CCEECCSSTTSSSEEEEEESSCSSTTCC
T ss_pred             cceeeeeeeeeeeeecc-----cccccccccccccceEEeeccccccccc
Confidence            67899999999877653     3334333333688999999998765443

>d1hpga_ b.47.1.1 (A:) Glutamic acid-specific protease {Streptomyces griseus [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamic acid-specific protease
species: Streptomyces griseus [TaxId: 1911]

Probab=81.18  E-value=2.9  Score=23.00  Aligned_cols=26  Identities=4%  Similarity=-0.284  Sum_probs=20.7

Q ss_pred             eeeecCCCCCCC--CCceEEEEeecccC
Q psy15292        100 IPVCLPDQTVKL--VGKSATVAGWGRTR  125 (132)
Q Consensus       100 ~~icl~~~~~~~--~g~~~~v~gwg~~~  125 (132)
                      ..+|-++++.++  .+....|..||...
T Consensus       136 ~~~~~GDSGgPl~~~~~~vGi~s~g~~~  163 (187)
T d1hpga_         136 ACSAGGDSGGAHFAGSVALGIHSGSSGC  163 (187)
T ss_dssp             CCCCTTCTTCEEEETTEEEEEEEEESCC
T ss_pred             cccccCCCCCeEEECCEEEEEEEEEecC
Confidence            357788998877  78899999998654