Psyllid ID: psy15324


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360---
ISKKSQNRLTQLVSVGAASASATDDNDNDDHYVPPVPTAPPLPSEQGHGHGHSHDTSQMNMRGVFLHILADALGSVIVIISATVIATTEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILLQTVPTHIQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWSKNTFGWARAEVLGALVNAVFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNVVDAIQRRLLENVDGVLAVHEFHVWQLAGDRIIASAHIRCRNLSEYMKLAEKVKEFFHNEGIHSTTIQPEFVELTEFAENKVSEDPSEDCVLDCPKYDTEKPCALSTCCGPSK
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEcccEEEEEEEEEEccccHHHHHHHHHHHHHHHcccccEEEcccccccccccccccccccccccccccccccccccccccccccccc
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHccEEEEEEEEEcccHHHHHHHHHHHHHHHHHccccEEEEEEEEEEcccccccccccccccccccccccccccccccccHcccccc
ISKKSQNRLTQLVSVGaasasatddndnddhyvppvptapplpseqghghghshdtsqmNMRGVFLHILADALGSVIVIISATVIatteweyryhiDPALSLLMVMLILRSVWPLLQESALILLQTVPTHIQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVkmspkkwskntfGWARAEVLGALVNAVFLVALCFSITVEACKRFIEvetihdpwLIVVVGALGLLVNVVDAIQRRLLENVDGVLAVHEFHVWQLAGDRIIASAHIRCRNLSEYMKLAEKVKEFFhnegihsttiqpefVELTEFAenkvsedpsedcvldcpkydtekpcalstccgpsk
iskksqnrLTQLVSVGAasasatddndnddHYVPPVPTAPPLPSEQGHGHGHSHDTSQMNMRGVFLHILADALGSVIVIISATVIATTEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILLQTVPTHIQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWSKNTFGWARAEVLGALVNAVFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNVVDAIQRRLLENVDGVLAVHEFHVWQLAGDRIIASAHIRCRNLSEYMKLAEKVKEFFHNEGIHSTTIQPEFVELTEFAENkvsedpsedCVLDCPKYdtekpcalstccgpsk
ISKKSQNRLTQLVSVGaasasatddndnddHYVppvptapplpSEQGHGHGHSHDTSQMNMRGVFLHILADALGsviviisatviattEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILLQTVPTHIQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWSKNTFGWARAEVLGALVNAVFLVALCFSITVEACKRFIEVETIHDPWlivvvgalgllvnvvDAIQRRLLENVDGVLAVHEFHVWQLAGDRIIASAHIRCRNLSEYMKLAEKVKEFFHNEGIHSTTIQPEFVELTEFAENKVSEDPSEDCVLDCPKYDTEKPCALSTCCGPSK
************************************************************MRGVFLHILADALGSVIVIISATVIATTEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILLQTVPTHIQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWSKNTFGWARAEVLGALVNAVFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNVVDAIQRRLLENVDGVLAVHEFHVWQLAGDRIIASAHIRCRNLSEYMKLAEKVKEFFHNEGIHSTTIQPEFVELTEFA**********DCVLDCPKYDTEKPCALSTC*****
***************************************************************VFLHILADALGSVIVIISATVIATTEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILLQTVPTHIQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWSKNTFGWARAEVLGALVNAVFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNVVDAIQRRLLENVDGVLAVHEFHVWQLAGDRIIASAHIRCRNLSEYMKLAEKVKEFFHNEGIHSTTIQPEF********************LDCPKYDTEKPCAL*TCCG***
**********QLVSVGAASASATDDNDNDDHYVPPVPTAPP**************TSQMNMRGVFLHILADALGSVIVIISATVIATTEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILLQTVPTHIQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWSKNTFGWARAEVLGALVNAVFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNVVDAIQRRLLENVDGVLAVHEFHVWQLAGDRIIASAHIRCRNLSEYMKLAEKVKEFFHNEGIHSTTIQPEFVELTEFAEN*********CVLDCPKYDTEKPC**********
*********************************************************QMNMRGVFLHILADALGSVIVIISATVIATTEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILLQTVPTHIQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWSKNTFGWARAEVLGALVNAVFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNVVDAIQRRLLENVDGVLAVHEFHVWQLAGDRIIASAHIRCRNLSEYMKLAEKVKEFFHNEGIHSTTIQPEFVELT**************CVLDCPKYDTEKPCALS*CC****
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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ISKKSQNRLTQLVSVGAASASATDDNDNDDHYVPPVPTAPPLPSEQGHGHGHSHDTSQMNMRGVFLHILADALGSVIVIISATVIATTEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILLQTVPTHIQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWSKNTFGWARAEVLGALVNAVFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNVVDAIQRRLLENVDGVLAVHEFHVWQLAGDRIIASAHIRCRNLSEYMKLAEKVKEFFHNEGIHSTTIQPEFVELTEFAENKVSEDPSEDCVLDCPKYDTEKPCALSTCCGPSK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query363 2.2.26 [Sep-21-2011]
P20107 442 Zinc/cadmium resistance p yes N/A 0.333 0.273 0.512 4e-31
Q3UVU3 470 Zinc transporter 10 OS=Mu yes N/A 0.333 0.257 0.536 1e-28
Q6XR72 485 Zinc transporter 10 OS=Ho yes N/A 0.333 0.249 0.528 3e-28
P32798 439 Cobalt uptake protein COT no N/A 0.333 0.275 0.471 1e-26
O13918 387 Zinc homeostasis factor 1 yes N/A 0.333 0.312 0.471 1e-26
Q62720 507 Zinc transporter 1 OS=Rat no N/A 0.333 0.238 0.520 2e-25
Q60738 503 Zinc transporter 1 OS=Mus no N/A 0.333 0.240 0.520 3e-25
Q9Y6M5 507 Zinc transporter 1 OS=Hom no N/A 0.333 0.238 0.520 3e-25
Q4R6K2 505 Zinc transporter 1 OS=Mac N/A N/A 0.333 0.239 0.512 5e-25
Q95QW4 561 Cation diffusion facilita yes N/A 0.316 0.204 0.387 8e-20
>sp|P20107|ZRC1_YEAST Zinc/cadmium resistance protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRC1 PE=1 SV=2 Back     alignment and function desciption
 Score =  135 bits (341), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 63/123 (51%), Positives = 94/123 (76%), Gaps = 2/123 (1%)

Query: 132 QKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKW- 190
           ++ R+IS+  L   FFL+EI +GY+++S+AL+ADSFHML+D+ +L+VA  +V ++  +  
Sbjct: 5   KELRIISLLTLDTVFFLLEITIGYMSHSLALIADSFHMLNDIISLLVALWAVDVAKNRGP 64

Query: 191 -SKNTFGWARAEVLGALVNAVFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLV 249
            +K T+GW RAE+LGAL+NAVFL+ALCFSI +EA +R IE + I +P L++ VG  GL+ 
Sbjct: 65  DAKYTYGWKRAEILGALINAVFLIALCFSIMIEALQRLIEPQEIQNPRLVLYVGVAGLIS 124

Query: 250 NVV 252
           NVV
Sbjct: 125 NVV 127




Probably responsible for the uptake of zinc and cadmium ions.
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)
>sp|Q3UVU3|ZNT10_MOUSE Zinc transporter 10 OS=Mus musculus GN=Slc30a10 PE=1 SV=1 Back     alignment and function description
>sp|Q6XR72|ZNT10_HUMAN Zinc transporter 10 OS=Homo sapiens GN=SLC30A10 PE=2 SV=2 Back     alignment and function description
>sp|P32798|COT1_YEAST Cobalt uptake protein COT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=COT1 PE=1 SV=2 Back     alignment and function description
>sp|O13918|ZHF1_SCHPO Zinc homeostasis factor 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zhf1 PE=2 SV=3 Back     alignment and function description
>sp|Q62720|ZNT1_RAT Zinc transporter 1 OS=Rattus norvegicus GN=Slc30a1 PE=2 SV=1 Back     alignment and function description
>sp|Q60738|ZNT1_MOUSE Zinc transporter 1 OS=Mus musculus GN=Slc30a1 PE=2 SV=1 Back     alignment and function description
>sp|Q9Y6M5|ZNT1_HUMAN Zinc transporter 1 OS=Homo sapiens GN=SLC30A1 PE=1 SV=3 Back     alignment and function description
>sp|Q4R6K2|ZNT1_MACFA Zinc transporter 1 OS=Macaca fascicularis GN=SLC30A1 PE=2 SV=1 Back     alignment and function description
>sp|Q95QW4|CDF1_CAEEL Cation diffusion facilitator family protein 1 OS=Caenorhabditis elegans GN=cdf-1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query363
195428419 562 GK16756 [Drosophila willistoni] gi|19415 0.303 0.195 0.859 2e-55
322789348438 hypothetical protein SINV_09120 [Solenop 0.308 0.255 0.892 5e-55
194749153451 GF10205 [Drosophila ananassae] gi|190624 0.303 0.243 0.859 6e-55
307185034 503 Zinc transporter 1 [Camponotus floridanu 0.308 0.222 0.892 8e-55
125976904450 GA14626 [Drosophila pseudoobscura pseudo 0.303 0.244 0.851 1e-54
383851717434 PREDICTED: zinc transporter 1-like [Mega 0.308 0.258 0.876 1e-54
380016266434 PREDICTED: LOW QUALITY PROTEIN: zinc tra 0.308 0.258 0.867 7e-54
340725878434 PREDICTED: zinc transporter 10-like [Bom 0.308 0.258 0.859 2e-53
189236200421 PREDICTED: similar to CG17723 CG17723-PA 0.314 0.270 0.851 2e-52
270005765443 hypothetical protein TcasGA2_TC007872 [T 0.314 0.257 0.851 3e-52
>gi|195428419|ref|XP_002062270.1| GK16756 [Drosophila willistoni] gi|194158355|gb|EDW73256.1| GK16756 [Drosophila willistoni] Back     alignment and taxonomy information
 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 104/121 (85%), Positives = 115/121 (95%)

Query: 132 QKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWS 191
           +KCRL+SM WLTAFFF VEI+VGYVTNSMALVADSFHML D+AALV++FLSVKMSPKKWS
Sbjct: 7   KKCRLLSMMWLTAFFFFVEIIVGYVTNSMALVADSFHMLGDIAALVISFLSVKMSPKKWS 66

Query: 192 KNTFGWARAEVLGALVNAVFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNV 251
           KNTFGWARAEVLGALVNAVFLVALCFSIT+EACKRFIE E IH+P L+V+VGALGLLVNV
Sbjct: 67  KNTFGWARAEVLGALVNAVFLVALCFSITIEACKRFIEEEPIHEPKLLVIVGALGLLVNV 126

Query: 252 V 252
           +
Sbjct: 127 I 127




Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322789348|gb|EFZ14660.1| hypothetical protein SINV_09120 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|194749153|ref|XP_001957004.1| GF10205 [Drosophila ananassae] gi|190624286|gb|EDV39810.1| GF10205 [Drosophila ananassae] Back     alignment and taxonomy information
>gi|307185034|gb|EFN71263.1| Zinc transporter 1 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|125976904|ref|XP_001352485.1| GA14626 [Drosophila pseudoobscura pseudoobscura] gi|195170573|ref|XP_002026086.1| GL16135 [Drosophila persimilis] gi|54641232|gb|EAL29982.1| GA14626 [Drosophila pseudoobscura pseudoobscura] gi|194110966|gb|EDW33009.1| GL16135 [Drosophila persimilis] Back     alignment and taxonomy information
>gi|383851717|ref|XP_003701378.1| PREDICTED: zinc transporter 1-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|380016266|ref|XP_003692108.1| PREDICTED: LOW QUALITY PROTEIN: zinc transporter 1-like [Apis florea] Back     alignment and taxonomy information
>gi|340725878|ref|XP_003401292.1| PREDICTED: zinc transporter 10-like [Bombus terrestris] gi|350397392|ref|XP_003484864.1| PREDICTED: zinc transporter 10-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|189236200|ref|XP_970510.2| PREDICTED: similar to CG17723 CG17723-PA [Tribolium castaneum] Back     alignment and taxonomy information
>gi|270005765|gb|EFA02213.1| hypothetical protein TcasGA2_TC007872 [Tribolium castaneum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query363
FB|FBgn0035432 449 ZnT63C [Drosophila melanogaste 0.289 0.233 0.876 1.9e-87
ZFIN|ZDB-GENE-040426-1840 498 slc30a1a "solute carrier famil 0.289 0.210 0.579 1.9e-52
ZFIN|ZDB-GENE-070424-43 475 slc30a1b "solute carrier famil 0.286 0.218 0.537 5.3e-49
UNIPROTKB|Q9Y6M5 507 SLC30A1 "Zinc transporter 1" [ 0.280 0.201 0.538 1.3e-47
UNIPROTKB|E1BN60 506 SLC30A1 "Uncharacterized prote 0.280 0.201 0.538 2.1e-47
MGI|MGI:1345281 503 Slc30a1 "solute carrier family 0.280 0.202 0.538 3.3e-47
RGD|61918 507 Slc30a1 "solute carrier family 0.280 0.201 0.538 7.2e-47
UNIPROTKB|J9P6Y7 492 SLC30A1 "Uncharacterized prote 0.269 0.199 0.53 1.3e-45
SGD|S000004856 442 ZRC1 "Vacuolar membrane zinc t 0.289 0.237 0.514 6.9e-42
MGI|MGI:2685058 470 Slc30a10 "solute carrier famil 0.283 0.219 0.523 4e-38
FB|FBgn0035432 ZnT63C [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 492 (178.3 bits), Expect = 1.9e-87, Sum P(2) = 1.9e-87
 Identities = 92/105 (87%), Positives = 100/105 (95%)

Query:   132 QKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWS 191
             +KCRL+SM WLTAFFF VEI+VGYVTNSMALVADSFHML D+AALV++FLSVKMSPKKWS
Sbjct:     7 KKCRLLSMMWLTAFFFFVEIIVGYVTNSMALVADSFHMLGDIAALVISFLSVKMSPKKWS 66

Query:   192 KNTFGWARAEVLGALVNAVFLVALCFSITVEACKRFIEVETIHDP 236
             KNTFGWARAEVLGALVNAVFLVALCFSIT+EACKRFIE E IH+P
Sbjct:    67 KNTFGWARAEVLGALVNAVFLVALCFSITIEACKRFIEEEPIHEP 111


GO:0005385 "zinc ion transmembrane transporter activity" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0006812 "cation transport" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0006882 "cellular zinc ion homeostasis" evidence=IMP
ZFIN|ZDB-GENE-040426-1840 slc30a1a "solute carrier family 30 (zinc transporter), member 1a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070424-43 slc30a1b "solute carrier family 30 (zinc transporter), member 1b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Y6M5 SLC30A1 "Zinc transporter 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BN60 SLC30A1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:1345281 Slc30a1 "solute carrier family 30 (zinc transporter), member 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|61918 Slc30a1 "solute carrier family 30 (zinc transporter), member 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|J9P6Y7 SLC30A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
SGD|S000004856 ZRC1 "Vacuolar membrane zinc transporter" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
MGI|MGI:2685058 Slc30a10 "solute carrier family 30, member 10" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query363
COG1230296 COG1230, CzcD, Co/Zn/Cd efflux system component [I 8e-36
TIGR01297268 TIGR01297, CDF, cation diffusion facilitator famil 4e-28
pfam01545273 pfam01545, Cation_efflux, Cation efflux family 5e-25
COG1230296 COG1230, CzcD, Co/Zn/Cd efflux system component [I 4e-20
PRK03557312 PRK03557, PRK03557, zinc transporter ZitB; Provisi 4e-20
COG0053304 COG0053, MMT1, Predicted Co/Zn/Cd cation transport 6e-16
PRK03557312 PRK03557, PRK03557, zinc transporter ZitB; Provisi 3e-13
pfam01545273 pfam01545, Cation_efflux, Cation efflux family 3e-12
TIGR01297268 TIGR01297, CDF, cation diffusion facilitator famil 1e-11
pfam01545273 pfam01545, Cation_efflux, Cation efflux family 8e-10
COG0053304 COG0053, MMT1, Predicted Co/Zn/Cd cation transport 1e-09
COG1230296 COG1230, CzcD, Co/Zn/Cd efflux system component [I 3e-09
TIGR01297268 TIGR01297, CDF, cation diffusion facilitator famil 5e-09
PRK09509299 PRK09509, fieF, ferrous iron efflux protein F; Rev 2e-05
>gnl|CDD|224151 COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism] Back     alignment and domain information
 Score =  131 bits (332), Expect = 8e-36
 Identities = 48/122 (39%), Positives = 78/122 (63%), Gaps = 2/122 (1%)

Query: 135 RLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWSKN- 193
           RL+    L   F L+EI+ G +T S+AL+AD+ HMLSD  AL++A +++K++ +  +K  
Sbjct: 23  RLLIALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAIKLARRPATKRF 82

Query: 194 TFGWARAEVLGALVNAVFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNVVD 253
           TFG+ R E+L A +NA+ L+ +   I  EA +R +    IH   ++ VV  +GL+VN+V 
Sbjct: 83  TFGYKRLEILAAFLNALLLIVVSLLILWEAIQRLLAPPPIHYSGML-VVAIIGLVVNLVS 141

Query: 254 AI 255
           A+
Sbjct: 142 AL 143


Length = 296

>gnl|CDD|233348 TIGR01297, CDF, cation diffusion facilitator family transporter Back     alignment and domain information
>gnl|CDD|216561 pfam01545, Cation_efflux, Cation efflux family Back     alignment and domain information
>gnl|CDD|224151 COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|235130 PRK03557, PRK03557, zinc transporter ZitB; Provisional Back     alignment and domain information
>gnl|CDD|223131 COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|235130 PRK03557, PRK03557, zinc transporter ZitB; Provisional Back     alignment and domain information
>gnl|CDD|216561 pfam01545, Cation_efflux, Cation efflux family Back     alignment and domain information
>gnl|CDD|233348 TIGR01297, CDF, cation diffusion facilitator family transporter Back     alignment and domain information
>gnl|CDD|216561 pfam01545, Cation_efflux, Cation efflux family Back     alignment and domain information
>gnl|CDD|223131 COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|224151 COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|233348 TIGR01297, CDF, cation diffusion facilitator family transporter Back     alignment and domain information
>gnl|CDD|181919 PRK09509, fieF, ferrous iron efflux protein F; Reviewed Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 363
COG0053304 MMT1 Predicted Co/Zn/Cd cation transporters [Inorg 100.0
PRK03557312 zinc transporter ZitB; Provisional 100.0
PRK09509299 fieF ferrous iron efflux protein F; Reviewed 100.0
TIGR01297268 CDF cation diffusion facilitator family transporte 100.0
COG1230296 CzcD Co/Zn/Cd efflux system component [Inorganic i 99.97
PF01545284 Cation_efflux: Cation efflux family; InterPro: IPR 99.95
KOG1485|consensus412 99.93
KOG1483|consensus404 99.91
KOG1484|consensus354 99.88
KOG1482|consensus379 99.87
COG0053304 MMT1 Predicted Co/Zn/Cd cation transporters [Inorg 99.82
COG1230296 CzcD Co/Zn/Cd efflux system component [Inorganic i 99.81
PRK03557312 zinc transporter ZitB; Provisional 99.78
PRK09509299 fieF ferrous iron efflux protein F; Reviewed 99.78
TIGR01297268 CDF cation diffusion facilitator family transporte 99.66
PF01545284 Cation_efflux: Cation efflux family; InterPro: IPR 99.52
KOG1485|consensus412 99.47
COG3965314 Predicted Co/Zn/Cd cation transporters [Inorganic 99.35
KOG2802|consensus503 99.2
KOG1484|consensus354 99.13
KOG1482|consensus379 98.96
KOG1483|consensus404 98.9
COG3965314 Predicted Co/Zn/Cd cation transporters [Inorganic 98.3
KOG2802|consensus503 97.42
PRK10019279 nickel/cobalt efflux protein RcnA; Provisional 93.54
>COG0053 MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism] Back     alignment and domain information
Probab=100.00  E-value=9.6e-39  Score=307.29  Aligned_cols=243  Identities=23%  Similarity=0.358  Sum_probs=222.8

Q ss_pred             CCcchhHHHHHHHHhhhHHHHHHHHHHHHHH-------hccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCcc
Q psy15324         57 SQMNMRGVFLHILADALGSVIVIISATVIAT-------TEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILLQTVPT  129 (363)
Q Consensus        57 g~~~~~~~~~h~laDa~~s~~~~ia~~~~~~-------yG~~~~~~~E~la~l~i~~~i~~~~~~l~~~s~~~l~~~~~~  129 (363)
                      ||.+|++|++|+++|.++|+..+++..++.+       |||+   |+|++++++++++|+++|+.++++++.+++.+.+.
T Consensus        37 gS~ALlADaihs~~D~~~si~~l~~l~~s~kp~d~~HpyGh~---k~E~l~sl~~~~~i~~~g~~i~~~a~~~~~~~~~~  113 (304)
T COG0053          37 GSVALLADAIHSLSDIVASLIVLIGLRISSKPPDRDHPYGHG---KAETLASLIVSILIFAAGFEILLEAIKRLISPQPV  113 (304)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence            7999999999999999999999999999977       9999   99999999999999999999999999999987655


Q ss_pred             c---hhhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHH
Q psy15324        130 H---IQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWSKNTFGWARAEVLGAL  206 (363)
Q Consensus       130 ~---~~~~~~~~~l~~n~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~~~~~G~~~~d~l~al  206 (363)
                      .   ....++++++++|++++.|++++|+++||++|.||++|+++|+++++++++|+...       .+||+++|+++++
T Consensus       114 ~~~~~~~~v~l~s~~~~~~l~~~~~~~~kk~~S~aL~Ada~h~~sD~~ts~~~lvgl~~~-------~~g~~~lD~i~a~  186 (304)
T COG0053         114 EPPLLALGVALISIVIKEALYRYLRRVGKKTNSQALIADALHHRSDVLTSLAVLVGLLGS-------LLGWPWLDPLAAL  186 (304)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHHHH-------HhCcHHHHHHHHH
Confidence            5   56777889999999999999999999999999999999999999999999999955       6799999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccccCchhHHHHHHHHHHHHHhHhHHHHHHHhhCCceeEEEEEEEEEEeCCeEEEEE
Q psy15324        207 VNAVFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNVVDAIQRRLLENVDGVLAVHEFHVWQLAGDRIIASA  286 (363)
Q Consensus       207 ~vs~~I~~~~~~l~~esi~~Lld~~~~~~~~~~~i~~vi~i~v~~v~~i~~~~i~~v~Gv~~v~dlhiw~v~g~~~v~~~  286 (363)
                      +++++|++.++++++|++..|||...+++.               .++++ +.+.+.|||..++++++| ..|+..++++
T Consensus       187 ~I~~~Il~~~~~~~~~s~~~L~d~~~~~~~---------------~~~i~-~~i~~~~~V~~v~~lr~R-~~G~~~~id~  249 (304)
T COG0053         187 LISLYILKTGFRLFKESVNELMDAALDPED---------------LEKIR-AIILSVPGVKGVHDLRTR-KSGSRIFIDV  249 (304)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCcCCCHHH---------------HHHHH-HHHhcCCcceeeecceee-eeCCeEEEEE
Confidence            999999999999999999999994443331               35554 456899999999999995 8999999999


Q ss_pred             EEEeC---ChhHHHHHHHHHHHHHHhc-C-CceEEEEeeecCccc
Q psy15324        287 HIRCR---NLSEYMKLAEKVKEFFHNE-G-IHSTTIQPEFVELTE  326 (363)
Q Consensus       287 Hi~v~---~v~~a~~i~~~I~~~lk~~-~-v~~vtI~vEp~~~~~  326 (363)
                      |+.++   +++++|+|.+++++.+++. + +.+++||+||....+
T Consensus       250 ~i~v~~~ls~~eah~I~~~ie~~i~~~~~~~~~v~IhveP~~~~~  294 (304)
T COG0053         250 HIEVDPDLSLEEAHEIADEVEKRIKKEFPKVADVTIHVEPLGEKE  294 (304)
T ss_pred             EEEECCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEecCCcccc
Confidence            99998   7999999999999999984 5 999999999987765



>PRK03557 zinc transporter ZitB; Provisional Back     alignment and domain information
>PRK09509 fieF ferrous iron efflux protein F; Reviewed Back     alignment and domain information
>TIGR01297 CDF cation diffusion facilitator family transporter Back     alignment and domain information
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF01545 Cation_efflux: Cation efflux family; InterPro: IPR002524 Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt Back     alignment and domain information
>KOG1485|consensus Back     alignment and domain information
>KOG1483|consensus Back     alignment and domain information
>KOG1484|consensus Back     alignment and domain information
>KOG1482|consensus Back     alignment and domain information
>COG0053 MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK03557 zinc transporter ZitB; Provisional Back     alignment and domain information
>PRK09509 fieF ferrous iron efflux protein F; Reviewed Back     alignment and domain information
>TIGR01297 CDF cation diffusion facilitator family transporter Back     alignment and domain information
>PF01545 Cation_efflux: Cation efflux family; InterPro: IPR002524 Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt Back     alignment and domain information
>KOG1485|consensus Back     alignment and domain information
>COG3965 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2802|consensus Back     alignment and domain information
>KOG1484|consensus Back     alignment and domain information
>KOG1482|consensus Back     alignment and domain information
>KOG1483|consensus Back     alignment and domain information
>COG3965 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2802|consensus Back     alignment and domain information
>PRK10019 nickel/cobalt efflux protein RcnA; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query363
3h90_A283 Ferrous-iron efflux pump FIEF; membrane protein, z 1e-15
3h90_A283 Ferrous-iron efflux pump FIEF; membrane protein, z 6e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A Length = 283 Back     alignment and structure
 Score = 75.3 bits (186), Expect = 1e-15
 Identities = 26/121 (21%), Positives = 56/121 (46%), Gaps = 2/121 (1%)

Query: 131 IQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKW 190
           + +  + +   + +   L++I   + T S++++A     L D+ A +   L V+ S +  
Sbjct: 2   VSRAAIAATA-MASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPA 60

Query: 191 SKN-TFGWARAEVLGALVNAVFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLV 249
             N +FG  +AE L AL  ++F+      + +   +  I    + DP + V+V  + L+ 
Sbjct: 61  DDNHSFGHGKAESLAALAQSMFISGSALFLFLTGIQHLISPTPMTDPGVGVIVTIVALIC 120

Query: 250 N 250
            
Sbjct: 121 T 121


>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A Length = 283 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query363
3j1z_P306 YIIP, cation efflux family protein; zinc transport 100.0
3h90_A283 Ferrous-iron efflux pump FIEF; membrane protein, z 100.0
3j1z_P306 YIIP, cation efflux family protein; zinc transport 99.78
3h90_A283 Ferrous-iron efflux pump FIEF; membrane protein, z 99.77
3byp_A94 CZRB protein; membrane protein, zinc transporter, 98.93
2zzt_A107 Putative uncharacterized protein; cation diffusion 98.83
>3j1z_P YIIP, cation efflux family protein; zinc transporter, secondary transporter, alternating access mechanism, metal transport; 13.00A {Shewanella oneidensis} Back     alignment and structure
Probab=100.00  E-value=8.5e-37  Score=293.49  Aligned_cols=245  Identities=21%  Similarity=0.252  Sum_probs=221.0

Q ss_pred             CCcchhHHHHHHHHhhhHHHHHHHHHHHHHH-------hccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCcc
Q psy15324         57 SQMNMRGVFLHILADALGSVIVIISATVIAT-------TEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILLQTVPT  129 (363)
Q Consensus        57 g~~~~~~~~~h~laDa~~s~~~~ia~~~~~~-------yG~~~~~~~E~la~l~i~~~i~~~~~~l~~~s~~~l~~~~~~  129 (363)
                      ||++|.+|.+|+++|+++++..+++..++.+       |||+   |+|++++++.+++++..++.++++|+++|++|.+.
T Consensus        37 gS~ALlaDa~hsl~D~~s~~i~l~~~~~s~k~~d~~~pyG~~---R~E~l~al~~~~~l~~~~~~i~~eai~~l~~p~~~  113 (306)
T 3j1z_P           37 GSASMLASLTDSFADTLASIINFIAIRYAIVPADHDHRYGHG---KAEPLAALAQSAFIMGSAFLLLFYGGERLLNPSPV  113 (306)
T ss_dssp             SSSCCCTHHHHTTHHHHHHHHHHHHHHHHTSCCCCTTSSCCT---THHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCchh---hHHHHHHHHHHHHHHHHHHHHHHHhhhheecCCCc
Confidence            8999999999999999999999999999965       9999   99999999999999999999999999999998875


Q ss_pred             c---hhhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHH
Q psy15324        130 H---IQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWSKNTFGWARAEVLGAL  206 (363)
Q Consensus       130 ~---~~~~~~~~~l~~n~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~~~~~G~~~~d~l~al  206 (363)
                      .   ....++++++++|++++++....+++.+|.++.||++|.++|+++++++++|+.++       .|||+++||++++
T Consensus       114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~s~~l~a~~~h~~~D~l~s~~vli~~~~~-------~~g~~~~Dpi~ai  186 (306)
T 3j1z_P          114 ENATLGVVVSVVAIVLTLALVLLQKRALAATNSTVVEADSLHYKSDLFLNAAVLLALVLS-------QYGWWWADGLFAV  186 (306)
T ss_dssp             GGTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHTTCCTTCCCTTSSC-------CSSSCCCHHHHHH
T ss_pred             cccccchhhhhhHhhhhHHHHHHHHHhccccCCHHHHHHHHhhcchhhhhhHHHHHHHHH-------HhCcchhhhHHHH
Confidence            5   34566778889999999999999999999999999999999999999999998887       6799999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccccCchhHHHHHHHHHHHHHhHhHHHHHHHhhCCceeEEEEEEEEEEeCCeEEEEE
Q psy15324        207 VNAVFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNVVDAIQRRLLENVDGVLAVHEFHVWQLAGDRIIASA  286 (363)
Q Consensus       207 ~vs~~I~~~~~~l~~esi~~Lld~~~~~~~~~~~i~~vi~i~v~~v~~i~~~~i~~v~Gv~~v~dlhiw~v~g~~~v~~~  286 (363)
                      +++++|++.++.++++++..|+|..++++.               .++++ +.+++.|||.+++|+|+|+. |+..++++
T Consensus       187 ~Ia~~I~~~~~~l~~~s~~~Ll~~~~~~~~---------------~~~I~-~~i~~~~~V~~vh~l~~~~~-G~~~~v~~  249 (306)
T 3j1z_P          187 LIACYIGQQAFDLGYRSIQALLDRELDEDT---------------RQRIK-LIAKEDPRVLGLHDLRTRQA-GKTVFIQF  249 (306)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCCHHH---------------HHHHH-HHHHHSTTBCCCCCBCCEEE-TTEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCcccchhH---------------HHHHH-HHHhcCCCcceeeeEEEEEE-CCcEEEEE
Confidence            999999999999999999999997655332               35554 46689999999999999875 67888999


Q ss_pred             EEEeC---ChhHHHHHHHHHHHHHHh-cCCceEEEEeeecCcccccc
Q psy15324        287 HIRCR---NLSEYMKLAEKVKEFFHN-EGIHSTTIQPEFVELTEFAE  329 (363)
Q Consensus       287 Hi~v~---~v~~a~~i~~~I~~~lk~-~~v~~vtI~vEp~~~~~~~~  329 (363)
                      |+++|   ++++++++.+++|+.+++ +++.+++||+||.+. ||++
T Consensus       250 hi~v~~~~sl~eah~i~~~ie~~l~~~~~~~~v~IhveP~~~-ePt~  295 (306)
T 3j1z_P          250 HLELDGNLSLNEAHSITDTTGLRVKAAFEDAEVIIHQDPVQV-EPTT  295 (306)
T ss_dssp             CCEECTTSBHHHHHHHHHHHHHHHHHHSTTCEEEECCEETTS-CCCC
T ss_pred             EEEECCCCCHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCCCC-CCCc
Confidence            99998   589999999999999987 699999999999875 4444



>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A Back     alignment and structure
>3j1z_P YIIP, cation efflux family protein; zinc transporter, secondary transporter, alternating access mechanism, metal transport; 13.00A {Shewanella oneidensis} Back     alignment and structure
>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A Back     alignment and structure
>3byp_A CZRB protein; membrane protein, zinc transporter, transport protein; 1.70A {Thermus thermophilus} SCOP: d.52.9.1 PDB: 3byr_A Back     alignment and structure
>2zzt_A Putative uncharacterized protein; cation diffusion facilitator (CDF), transporter, zinc, membrane protein, cytosolic domain; 2.84A {Thermotoga maritima} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 363
d2qfia2204 f.59.1.1 (A:5-208) Ferrous-iron efflux pump FieF { 8e-17
d2qfia2204 f.59.1.1 (A:5-208) Ferrous-iron efflux pump FieF { 4e-07
>d2qfia2 f.59.1.1 (A:5-208) Ferrous-iron efflux pump FieF {Escherichia coli [TaxId: 562]} Length = 204 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Cation efflux protein transmembrane domain-like
superfamily: Cation efflux protein transmembrane domain-like
family: Cation efflux protein transmembrane domain-like
domain: Ferrous-iron efflux pump FieF
species: Escherichia coli [TaxId: 562]
 Score = 76.0 bits (186), Expect = 8e-17
 Identities = 26/119 (21%), Positives = 56/119 (47%), Gaps = 1/119 (0%)

Query: 135 RLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWSK-N 193
             I+   + +   L++I   + T S++++A     L D+ A +   L V+ S +     +
Sbjct: 8   AAIAATAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNH 67

Query: 194 TFGWARAEVLGALVNAVFLVALCFSITVEACKRFIEVETIHDPWLIVVVGALGLLVNVV 252
           +FG  +AE L AL  ++F+      + +   +  I    + DP + V+V  + L+  ++
Sbjct: 68  SFGHGKAESLAALAQSMFISGSALFLFLTGIQHLISPTPMTDPGVGVIVTIVALICTII 126


>d2qfia2 f.59.1.1 (A:5-208) Ferrous-iron efflux pump FieF {Escherichia coli [TaxId: 562]} Length = 204 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query363
d2qfia2204 Ferrous-iron efflux pump FieF {Escherichia coli [T 99.69
d2qfia2204 Ferrous-iron efflux pump FieF {Escherichia coli [T 99.55
d3bypa182 Putative Zinc transporter CzrB {Thermus thermophil 98.75
d2qfia182 Ferrous-iron efflux pump FieF (YiiP) {Escherichia 98.39
>d2qfia2 f.59.1.1 (A:5-208) Ferrous-iron efflux pump FieF {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Cation efflux protein transmembrane domain-like
superfamily: Cation efflux protein transmembrane domain-like
family: Cation efflux protein transmembrane domain-like
domain: Ferrous-iron efflux pump FieF
species: Escherichia coli [TaxId: 562]
Probab=99.69  E-value=1.5e-22  Score=181.00  Aligned_cols=164  Identities=20%  Similarity=0.225  Sum_probs=149.7

Q ss_pred             CCcchhHHHHHHHHhhhHHHHHHHHHHHHHH-------hccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCcc
Q psy15324         57 SQMNMRGVFLHILADALGSVIVIISATVIAT-------TEWEYRYHIDPALSLLMVMLILRSVWPLLQESALILLQTVPT  129 (363)
Q Consensus        57 g~~~~~~~~~h~laDa~~s~~~~ia~~~~~~-------yG~~~~~~~E~la~l~i~~~i~~~~~~l~~~s~~~l~~~~~~  129 (363)
                      +|.++.+|++|+++|.+.++..+++...+.+       |||+   |.|++++++.++++++.++.+++++++++.+|.+.
T Consensus        31 ~S~allada~~s~~D~~~~~~~l~~~~~s~k~~d~~~pyG~~---r~E~l~~l~~~~~l~~~~~~~~~~si~~l~~~~~~  107 (204)
T d2qfia2          31 GSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNHSFGHG---KAESLAALAQSMFISGSALFLFLTGIQHLISPTPM  107 (204)
T ss_dssp             TSSCCCCCCCTTHHHHHHHHHHHHHHTTSSSSCSTTSSCSCC---THHHHHHHTTTTTTSSSTTGGGSSCTTSSTTTSSS
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccCCcchh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            8999999999999999999999999988855       8998   99999999999999999999999999999998765


Q ss_pred             c---hhhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHH
Q psy15324        130 H---IQKCRLISMFWLTAFFFLVEIVVGYVTNSMALVADSFHMLSDVAALVVAFLSVKMSPKKWSKNTFGWARAEVLGAL  206 (363)
Q Consensus       130 ~---~~~~~~~~~l~~n~~l~~~~~~~g~~~~S~aL~Ada~h~~~D~~ss~~~l~g~~~s~~~~~~~~~G~~~~d~l~al  206 (363)
                      .   ......+++++++.++..++.+.+++.+|.++.||+.|.+.|+++++++++++.+.       .+||+++||++++
T Consensus       108 ~~~~~~~~v~~~~~~~~~~l~~~~~~~~~~~~s~~~~a~~~~~~~D~~~s~~vii~~~~~-------~~~~~~~D~i~ai  180 (204)
T d2qfia2         108 TDPGVGVIVTIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMMNGAILLALGLS-------WYGWHRADALFAL  180 (204)
T ss_dssp             STTTSCCCCCGGGSSCGGGGTTTHHHHGGGCCSTTSGGGGGGHHHHTCCSSTTCCCTTSS-------CSSTTSSSSSSHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHH-------HhCchhhhHHHHH
Confidence            4   23344557778888999999999999999999999999999999999998887776       6799999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcc
Q psy15324        207 VNAVFLVALCFSITVEACKRFIEV  230 (363)
Q Consensus       207 ~vs~~I~~~~~~l~~esi~~Lld~  230 (363)
                      ++++++++.++.+++|+++.|+|.
T Consensus       181 ii~~~i~~~~~~~~~~~~~~Lld~  204 (204)
T d2qfia2         181 GIGIYILYSALRMGYEAVQSLLDR  204 (204)
T ss_dssp             HHTTTTTTTTTTHHHHTGGGSSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCc
Confidence            999999999999999999999984



>d2qfia2 f.59.1.1 (A:5-208) Ferrous-iron efflux pump FieF {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3bypa1 d.52.9.1 (A:6-87) Putative Zinc transporter CzrB {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2qfia1 d.52.9.1 (A:209-290) Ferrous-iron efflux pump FieF (YiiP) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure