Psyllid ID: psy15353

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340----
MIHILVFLLGCTLVRGELYKFSDAYIDQINREANTWTAGRNFPANLSEEYLRQFLIADAKYFDQSDRPLPGDRKTYDPEYSATVPDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVASCCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPTLPSCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGPTTATFALYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDRGTVKILRGKYECAFEYLIAAGKPKN
cHHHHHHHHHHHHHcccccccHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEccccccccHHHHHHHHHHcccEEEEEEEccccccccccEEEcccccccccccEEEEEEEEcccccEEEEEEEccccccccccccEEEEcccccccccccEEEEcccc
ccEEEEccHcHHHHHccccHcHHHHHHHHHcccccEEEcccccccccHHHHHHHHcccccccccccccccccccEEcccccccccccEEHHHHcccccccccccEccccccHHHHHHHHHHHHHHHHHccccccccEcHHHHHHHccHHHEcHHHcEcHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcEcEEEEEEEcccHHHHHHHHHHHccEEEEEEEEHHHccccccEEcccccccccccccEEEEEEEEEEccEEEEEEEccEcccccEccEEEEEccccHHHccccEEEEEEcc
MIHILVFLLGCTlvrgelykfsDAYIDQINREAntwtagrnfpanlSEEYLRQFLIADakyfdqsdrplpgdrktydpeysatvpdrfdareqwpncgtighvpdtgacaaphIFAAVgafsdrrcikskgqqnrplsteYVASCCkicryddnkscshgsvfrtwnflhkrgsvtggdygdrtgcqpstispcshhgsaptlpscenqkvpklkchtrctnptygrgffqdkhrttltywvDDNEDAIKKEIlahgpttatfalyddfyhyksgvykhtsnakleNYLHSgkligwgtengtpYWLVINtwgphwgdrgtVKILRGKYECAFEYLIAAGKPKN
MIHILVFLLGCTLVRGELYKFSDAYIDQINREANTWTAGRNFPANLSEEYLRQFLIADAkyfdqsdrplpgdrktydPEYSATVPDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKskgqqnrplsteYVASCCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPTLPSCENQKVPKLKCHTRCTNptygrgffqdkhrTTLTYWVDDNEDAIKKEILAHGPTTATFALYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDRGTVKILRGKYECAFEYLIAAGKPKN
MIHILVFLLGCTLVRGELYKFSDAYIDQINREANTWTAGRNFPANLSEEYLRQFLIADAKYFDQSDRPLPGDRKTYDPEYSATVPDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVASCCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPTLPSCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGPTTATFALYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDRGTVKILRGKYECAFEYLIAAGKPKN
*IHILVFLLGCTLVRGELYKFSDAYIDQINREANTWTAGRNFPANLSEEYLRQFLIADAKYFD**********************DRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSK****RPLSTEYVASCCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYG*****************************VPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGPTTATFALYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDRGTVKILRGKYECAFEYLIAA*****
MIHILVFLLGCTLVRGELYKFSDAYIDQINREANTWTAGRNFPANLSEEYLRQ****************************ATVPDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVASCCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPTLPSCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGPTTATFALYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDRGTVKILRGKYECAFEYLIAAGKPK*
MIHILVFLLGCTLVRGELYKFSDAYIDQINREANTWTAGRNFPANLSEEYLRQFLIADAKYFDQSDRPLPGDRKTYDPEYSATVPDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVASCCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPTLPSCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGPTTATFALYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDRGTVKILRGKYECAFEYLIAAGKPKN
MIHILVFLLGCTLVRGELYKFSDAYIDQINREANTWTAGRNFPANLSEEYLRQFLIADAK************RKTYDPEYSATVPDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVASCCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPTLPSCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGPTTATFALYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDRGTVKILRGKYECAFEYLIAAGKPKN
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MIHILVFLLGCTLVRGELYKFSDAYIDQINREANTWTAGRNFPANLSEEYLRQFLIADAKYFDQSDRPLPGDRKTYDPEYSATVPDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVASCCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPTLPSCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGPTTATFALYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDRGTVKILRGKYECAFEYLIAAGKPKN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query344 2.2.26 [Sep-21-2011]
P43509344 Cathepsin B-like cysteine yes N/A 0.889 0.889 0.389 1e-58
P43508335 Cathepsin B-like cysteine no N/A 0.950 0.976 0.373 6e-57
A1E295335 Cathepsin B OS=Sus scrofa yes N/A 0.944 0.970 0.377 7e-57
P00787339 Cathepsin B OS=Rattus nor yes N/A 0.895 0.908 0.387 1e-56
Q4R5M2339 Cathepsin B OS=Macaca fas N/A N/A 0.933 0.946 0.369 2e-56
P07858339 Cathepsin B OS=Homo sapie yes N/A 0.930 0.943 0.362 4e-55
Q5R6D1339 Cathepsin B OS=Pongo abel yes N/A 0.904 0.917 0.369 4e-55
P07688335 Cathepsin B OS=Bos taurus yes N/A 0.933 0.958 0.379 4e-55
P10605339 Cathepsin B OS=Mus muscul yes N/A 0.889 0.902 0.382 5e-55
P25792340 Cathepsin B-like cysteine N/A N/A 0.941 0.952 0.344 7e-53
>sp|P43509|CPR5_CAEEL Cathepsin B-like cysteine proteinase 5 OS=Caenorhabditis elegans GN=cpr-5 PE=2 SV=1 Back     alignment and function desciption
 Score =  227 bits (579), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 125/321 (38%), Positives = 169/321 (52%), Gaps = 15/321 (4%)

Query: 24  AYIDQINREANTWTAGRNFPANLSEEYLRQFLIADAKYFDQSDRPLP-GDRKTYDPEYSA 82
           A ID +N     WTAG      + +E + + L+ D KY       +P  D      E S 
Sbjct: 31  ALIDYVNSAQKLWTAGHQV---IPKEKITKKLM-DVKYL------VPHKDEDIVATEVSD 80

Query: 83  TVPDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYV 142
            +PD FDAR+QWPNC +I ++ D   C +   FAA  A SDR CI S G  N  LS+E +
Sbjct: 81  AIPDHFDARDQWPNCMSINNIRDQSDCGSCWAFAAAEAISDRTCIASNGAVNTLLSSEDL 140

Query: 143 ASCCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPT 202
            SCC    +     C  G   + W +  K G VTGG Y  + GC+P +I+PC    +   
Sbjct: 141 LSCCT-GMFSCGNGCEGGYPIQAWKWWVKHGLVTGGSYETQFGCKPYSIAPCGETVNGVK 199

Query: 203 LPSCENQKVPKLKCHTRCTNP-TYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGPTTA 261
            P+C     P  KC   CT+   Y   + QDKH  +  Y V    + I+ EIL +GP   
Sbjct: 200 WPACPEDTEPTPKCVDSCTSKNNYATPYLQDKHFGSTAYAVGKKVEQIQTEILTNGPIEV 259

Query: 262 TFALYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDRGT 321
            F +Y+DFY Y +GVY HT+ A L    H+ K++GWG +NGTPYWLV N+W   WG++G 
Sbjct: 260 AFTVYEDFYQYTTGVYVHTAGASLGG--HAVKILGWGVDNGTPYWLVANSWNVAWGEKGY 317

Query: 322 VKILRGKYECAFEYLIAAGKP 342
            +I+RG  EC  E+   AG P
Sbjct: 318 FRIIRGLNECGIEHSAVAGIP 338

Caenorhabditis elegans (taxid: 6239)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: -
>sp|P43508|CPR4_CAEEL Cathepsin B-like cysteine proteinase 4 OS=Caenorhabditis elegans GN=cpr-4 PE=2 SV=1 Back     alignment and function description
>sp|A1E295|CATB_PIG Cathepsin B OS=Sus scrofa GN=CTSB PE=1 SV=1 Back     alignment and function description
>sp|P00787|CATB_RAT Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2 Back     alignment and function description
>sp|Q4R5M2|CATB_MACFA Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV=1 Back     alignment and function description
>sp|P07858|CATB_HUMAN Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3 Back     alignment and function description
>sp|Q5R6D1|CATB_PONAB Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1 Back     alignment and function description
>sp|P07688|CATB_BOVIN Cathepsin B OS=Bos taurus GN=CTSB PE=1 SV=5 Back     alignment and function description
>sp|P10605|CATB_MOUSE Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2 Back     alignment and function description
>sp|P25792|CYSP_SCHMA Cathepsin B-like cysteine proteinase OS=Schistosoma mansoni PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query344
225713216333 Cathepsin B precursor [Lepeophtheirus sa 0.950 0.981 0.392 5e-61
312374701335 hypothetical protein AND_15621 [Anophele 0.941 0.967 0.382 1e-60
87246247333 cathepsin B-like cysteine protease [Tria 0.950 0.981 0.396 3e-60
204022077334 cathepsin B-S1 [Tuberaphis sumatrana] gi 0.947 0.976 0.389 4e-60
160333103326 capthepsin B, b precursor [Danio rerio] 0.936 0.987 0.404 5e-60
49036808332 cathepsin B-like proteinase [Triatoma vi 0.941 0.975 0.402 7e-60
308390275332 cathepsin B [Marsupenaeus japonicus] 0.947 0.981 0.395 9e-60
56462338338 cysteine peptidase 2 cathepsin-B-like [L 0.904 0.920 0.387 1e-59
48762476349 cathepsin B-S [Tuberaphis styraci] gi|20 0.938 0.925 0.382 2e-59
146217390331 cathepsin B [Penaeus monodon] 0.936 0.972 0.391 4e-59
>gi|225713216|gb|ACO12454.1| Cathepsin B precursor [Lepeophtheirus salmonis] gi|290561811|gb|ADD38303.1| Cathepsin B [Lepeophtheirus salmonis] Back     alignment and taxonomy information
 Score =  241 bits (614), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 137/349 (39%), Positives = 183/349 (52%), Gaps = 22/349 (6%)

Query: 1   MIHILVFLL----GCTLVRGELYK--FSDAYIDQINREANTWTAGRNFPANLSEEYLRQF 54
           MI    FLL    G    RG +     S  YID IN+++ TW AG NF   +S  Y+R  
Sbjct: 1   MILKFAFLLTVYAGAAYSRGAVSNGILSKDYIDSINKDSKTWRAGSNFDEEISTSYIRGL 60

Query: 55  LIADAKYFDQSDRPLPGDRKTYDPEYSATVPDRFDAREQWPNCGTIGHVPDTGACAAPHI 114
           +     + D     LP    T        +P+ FD+R++WP+C TI  + D G+C +   
Sbjct: 61  MGVLPNHKDYLPPALPTLLGT------EQIPENFDSRQKWPHCPTISLIRDQGSCGSCWA 114

Query: 115 FAAVGAFSDRRCIKSKGQQNRPLSTEYVASCCKICRYDDNKSCSHGSVFRTWNFLHKRGS 174
           F AV A SDR CI S    N  +S E + SCC  C +     C+ G     W+F  K+G 
Sbjct: 115 FGAVEAMSDRLCIHSNKIVN--VSAENLLSCCYSCGF----GCNGGFPGAAWSFWKKKGL 168

Query: 175 VTGGDYGDRTGCQPSTISPCSHHGSAPTLPSCENQKVPKLKCHTRCTNPTYGRGFFQDKH 234
           V+GG YG   GCQP  I+PC HH +    P     + PK  CHT C N  Y   + +DK 
Sbjct: 169 VSGGLYGSHKGCQPYAIAPCEHHANGTRPPCSGGGRTPK--CHTFCENEDYSLPYEKDKS 226

Query: 235 RTTLTYWVDDNEDAIKKEILAHGPTTATFALYDDFYHYKSGVYKHTSNAKLENYLHSGKL 294
               +Y V  +   I+ EI+ +GP  A F++Y DF +YKSGVY+H   + L    H+ ++
Sbjct: 227 FGRSSYSVKSDPKQIQLEIMNNGPVEAAFSVYSDFLNYKSGVYRHVKGSLLGG--HAIRI 284

Query: 295 IGWGTENGTPYWLVINTWGPHWGDRGTVKILRGKYECAFEYLIAAGKPK 343
           +GWG ENGTPYWLV N+W   WGD GT KIL+G   C  E  I AG P+
Sbjct: 285 LGWGVENGTPYWLVANSWNTDWGDNGTFKILKGSDHCGIEGSIVAGLPQ 333

Source: Lepeophtheirus salmonis

Species: Lepeophtheirus salmonis

Genus: Lepeophtheirus

Family: Caligidae

Order: Siphonostomatoida

Class: Maxillopoda

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|312374701|gb|EFR22198.1| hypothetical protein AND_15621 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|87246247|gb|ABD35300.1| cathepsin B-like cysteine protease [Triatoma infestans] Back     alignment and taxonomy information
>gi|204022077|dbj|BAG71136.1| cathepsin B-S1 [Tuberaphis sumatrana] gi|204022079|dbj|BAG71137.1| cathepsin B-S2 [Tuberaphis sumatrana] Back     alignment and taxonomy information
>gi|160333103|ref|NP_001103948.1| capthepsin B, b precursor [Danio rerio] gi|133777414|gb|AAI15255.1| Ctsbb protein [Danio rerio] Back     alignment and taxonomy information
>gi|49036808|gb|AAT48985.1| cathepsin B-like proteinase [Triatoma vitticeps] Back     alignment and taxonomy information
>gi|308390275|gb|ADO32581.1| cathepsin B [Marsupenaeus japonicus] Back     alignment and taxonomy information
>gi|56462338|gb|AAV91452.1| cysteine peptidase 2 cathepsin-B-like [Lonomia obliqua] Back     alignment and taxonomy information
>gi|48762476|dbj|BAD23809.1| cathepsin B-S [Tuberaphis styraci] gi|204022069|dbj|BAG71132.1| cathepsin B-S1 [Tuberaphis styraci] Back     alignment and taxonomy information
>gi|146217390|gb|ABQ10737.1| cathepsin B [Penaeus monodon] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query344
WB|WBGene00000784335 cpr-4 [Caenorhabditis elegans 0.950 0.976 0.376 3.5e-59
FB|FBgn0030521340 CtsB1 "Cathepsin B1" [Drosophi 0.927 0.938 0.375 7.3e-59
WB|WBGene00000785344 cpr-5 [Caenorhabditis elegans 0.889 0.889 0.389 9.3e-59
ZFIN|ZDB-GENE-070323-1326 ctsbb "capthepsin B, b" [Danio 0.770 0.812 0.428 3.6e-57
MGI|MGI:88561339 Ctsb "cathepsin B" [Mus muscul 0.930 0.943 0.379 1.6e-56
UNIPROTKB|F1N9D7340 CTSB "Cathepsin B" [Gallus gal 0.889 0.9 0.363 3.7e-55
UNIPROTKB|E2R6Q7339 CTSB "Uncharacterized protein" 0.723 0.734 0.432 2.1e-54
UNIPROTKB|P07688335 CTSB "Cathepsin B" [Bos taurus 0.726 0.746 0.434 3.4e-54
WB|WBGene00000786379 cpr-6 [Caenorhabditis elegans 0.909 0.825 0.356 2.4e-53
UNIPROTKB|A1E295335 CTSB "Cathepsin B" [Sus scrofa 0.723 0.743 0.429 3e-53
WB|WBGene00000784 cpr-4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
 Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
 Identities = 129/343 (37%), Positives = 180/343 (52%)

Query:     4 ILVFLLGCT--LVRGELYKFSDAYIDQINREANTWTAGRNFPANLSEEYLRQFLIADAKY 61
             IL  L+  T  LV   + K  +A  + +N + + W A    P +++ E +++ L+     
Sbjct:     5 ILAALVAVTAGLVIPLVPKTQEAITEYVNSKQSLWKA--EIPKDITIEQVKKRLMRTE-- 60

Query:    62 FDQSDRPLPGDRKTYDPEYSA-TVPDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGA 120
             F     P   D +    + +  T+P  FDAR QWPNC +I ++ D   C +   FAA  A
Sbjct:    61 FVAPHTP---DVEVVKHDINEDTIPATFDARTQWPNCMSINNIRDQSDCGSCWAFAAAEA 117

Query:   121 FSDRRCIKSKGQQNRPLSTEYVASCCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDY 180
              SDR CI S G  N  LS E V SCC  C Y     C  G     W +L K G  TGG Y
Sbjct:   118 ASDRFCIASNGAVNTLLSAEDVLSCCSNCGY----GCEGGYPINAWKYLVKSGFCTGGSY 173

Query:   181 GDRTGCQPSTISPCSHHGSAPTLPSCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTY 240
               + GC+P +++PC       T PSC +       C  +CTN  Y   +  DKH  +  Y
Sbjct:   174 EAQFGCKPYSLAPCGETVGNVTWPSCPDDGYDTPACVNKCTNKNYNVAYTADKHFGSTAY 233

Query:   241 WVDDNEDAIKKEILAHGPTTATFALYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTE 300
              V      I+ EI+AHGP  A F +Y+DFY YK+GVY HT+  +L    H+ +++GWGT+
Sbjct:   234 AVGKKVSQIQAEIIAHGPVEAAFTVYEDFYQYKTGVYVHTTGQELGG--HAIRILGWGTD 291

Query:   301 NGTPYWLVINTWGPHWGDRGTVKILRGKYECAFEYLIAAGKPK 343
             NGTPYWLV N+W  +WG+ G  +I+RG  EC  E+ +  G PK
Sbjct:   292 NGTPYWLVANSWNVNWGENGYFRIIRGTNECGIEHAVVGGVPK 334
GO:0006508 "proteolysis" evidence=IEA
GO:0008234 "cysteine-type peptidase activity" evidence=IEA
FB|FBgn0030521 CtsB1 "Cathepsin B1" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
WB|WBGene00000785 cpr-5 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070323-1 ctsbb "capthepsin B, b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:88561 Ctsb "cathepsin B" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1N9D7 CTSB "Cathepsin B" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E2R6Q7 CTSB "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P07688 CTSB "Cathepsin B" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
WB|WBGene00000786 cpr-6 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|A1E295 CTSB "Cathepsin B" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P00787CATB_RAT3, ., 4, ., 2, 2, ., 10.38760.89530.9085yesN/A
P43233CATB_CHICK3, ., 4, ., 2, 2, ., 10.35290.89240.9029yesN/A
Q54QD9CTSB_DICDI3, ., 4, ., 2, 2, ., 10.34570.70340.7781yesN/A
A1E295CATB_PIG3, ., 4, ., 2, 2, ., 10.37790.94470.9701yesN/A
P07688CATB_BOVIN3, ., 4, ., 2, 2, ., 10.37930.93310.9582yesN/A
P10605CATB_MOUSE3, ., 4, ., 2, 2, ., 10.38290.88950.9026yesN/A
Q5R6D1CATB_PONAB3, ., 4, ., 2, 2, ., 10.36960.90400.9174yesN/A
P43509CPR5_CAEEL3, ., 4, ., 2, 2, ., -0.38940.88950.8895yesN/A
P07858CATB_HUMAN3, ., 4, ., 2, 2, ., 10.36280.93020.9439yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.22.10.824
3rd Layer3.4.220.766

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query344
cd02620236 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B gro 1e-95
pfam00112213 pfam00112, Peptidase_C1, Papain family cysteine pr 2e-47
cd02248210 cd02248, Peptidase_C1A, Peptidase C1A subfamily (M 6e-29
cd02621243 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; al 5e-27
cd02698239 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; th 6e-21
smart00645175 smart00645, Pept_C1, Papain family cysteine protea 6e-20
cd02619223 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS 5e-16
PTZ00203348 PTZ00203, PTZ00203, cathepsin L protease; Provisio 4e-13
PTZ00049693 PTZ00049, PTZ00049, cathepsin C-like protein; Prov 1e-12
smart00645175 smart00645, Pept_C1, Papain family cysteine protea 5e-12
PTZ00364548 PTZ00364, PTZ00364, dipeptidyl-peptidase I precurs 4e-11
PTZ00200448 PTZ00200, PTZ00200, cysteine proteinase; Provision 3e-09
pfam0812741 pfam08127, Propeptide_C1, Peptidase family C1 prop 2e-08
PTZ00462 1004 PTZ00462, PTZ00462, Serine-repeat antigen protein; 2e-06
PTZ00021489 PTZ00021, PTZ00021, falcipain-2; Provisional 2e-06
>gnl|CDD|239111 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information 
 Score =  283 bits (726), Expect = 1e-95
 Identities = 113/256 (44%), Positives = 143/256 (55%), Gaps = 20/256 (7%)

Query: 85  PDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVAS 144
           P+ FDARE+WPNC +IG + D G C +   F+AV AFSDR CI+S G++N  LS + + S
Sbjct: 1   PESFDAREKWPNCISIGEIRDQGNCGSCWAFSAVEAFSDRLCIQSNGKENVLLSAQDLLS 60

Query: 145 CCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPTLP 204
           CC  C       C+ G     W +L   G VTG       GCQP TI PC HH   P  P
Sbjct: 61  CCSGC----GDGCNGGYPDAAWKYLTTTGVVTG-------GCQPYTIPPCGHHPEGP--P 107

Query: 205 SCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGPTTATFA 264
            C        KC   C        + +DKH+    Y V  +E  I KEI+ +GP  A F 
Sbjct: 108 PCCGTPYCTPKCQDGCEKT-----YEEDKHKGKSAYSVPSDETDIMKEIMTNGPVQAAFT 162

Query: 265 LYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDRGTVKI 324
           +Y+DF +YKSGVY+HTS  +L    H+ K+IGWG ENG PYWL  N+WG  WG+ G  +I
Sbjct: 163 VYEDFLYYKSGVYQHTSGKQL--GGHAVKIIGWGVENGVPYWLAANSWGTDWGENGYFRI 220

Query: 325 LRGKYECAFEYLIAAG 340
           LRG  EC  E  + AG
Sbjct: 221 LRGSNECGIESEVVAG 236

Cathepsin B is a lysosomal papain-like cysteine peptidase which is expressed in all tissues and functions primarily as an exopeptidase through its carboxydipeptidyl activity. Together with other cathepsins, it is involved in the degradation of proteins, proenzyme activation, Ag processing, metabolism and apoptosis. Cathepsin B has been implicated in a number of human diseases such as cancer, rheumatoid arthritis, osteoporosis and Alzheimer's disease. The unique carboxydipeptidyl activity of cathepsin B is attributed to the presence of an occluding loop in its active site which favors the binding of the C-termini of substrate proteins. Some members of this group do not possess the occluding loop. TIN-Ag is an extracellular matrix basement protein which was originally identified as a target Ag involved in anti-tubular basement membrane antibody-mediated interstitial nephritis. It plays a role in renal tubulogenesis and is defective in hereditary tubulointerstitial disorders. TIN-Ag is exclusively expressed in kidney tissues. . Length = 236
>gnl|CDD|215726 pfam00112, Peptidase_C1, Papain family cysteine protease Back     alignment and domain information
>gnl|CDD|239068 cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>gnl|CDD|239112 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>gnl|CDD|239149 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>gnl|CDD|214761 smart00645, Pept_C1, Papain family cysteine protease Back     alignment and domain information
>gnl|CDD|239110 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>gnl|CDD|185513 PTZ00203, PTZ00203, cathepsin L protease; Provisional Back     alignment and domain information
>gnl|CDD|240244 PTZ00049, PTZ00049, cathepsin C-like protein; Provisional Back     alignment and domain information
>gnl|CDD|214761 smart00645, Pept_C1, Papain family cysteine protease Back     alignment and domain information
>gnl|CDD|240381 PTZ00364, PTZ00364, dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>gnl|CDD|240310 PTZ00200, PTZ00200, cysteine proteinase; Provisional Back     alignment and domain information
>gnl|CDD|203856 pfam08127, Propeptide_C1, Peptidase family C1 propeptide Back     alignment and domain information
>gnl|CDD|185641 PTZ00462, PTZ00462, Serine-repeat antigen protein; Provisional Back     alignment and domain information
>gnl|CDD|240232 PTZ00021, PTZ00021, falcipain-2; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 344
KOG1542|consensus372 100.0
PTZ00203348 cathepsin L protease; Provisional 100.0
KOG1543|consensus325 100.0
PTZ00021489 falcipain-2; Provisional 100.0
cd02620236 Peptidase_C1A_CathepsinB Cathepsin B group; compos 100.0
PTZ00200448 cysteine proteinase; Provisional 100.0
cd02621243 Peptidase_C1A_CathepsinC Cathepsin C; also known a 100.0
cd02698239 Peptidase_C1A_CathepsinX Cathepsin X; the only pap 100.0
PTZ00049693 cathepsin C-like protein; Provisional 100.0
cd02248210 Peptidase_C1A Peptidase C1A subfamily (MEROPS data 100.0
PTZ00364548 dipeptidyl-peptidase I precursor; Provisional 100.0
KOG1544|consensus470 100.0
PF00112219 Peptidase_C1: Papain family cysteine protease This 100.0
smart00645174 Pept_C1 Papain family cysteine protease. 100.0
cd02619223 Peptidase_C1 C1 Peptidase family (MEROPS database 100.0
PTZ00462 1004 Serine-repeat antigen protein; Provisional 100.0
COG4870372 Cysteine protease [Posttranslational modification, 99.95
cd00585437 Peptidase_C1B Peptidase C1B subfamily (MEROPS data 99.88
PF03051438 Peptidase_C1_2: Peptidase C1-like family This fami 99.61
COG3579444 PepC Aminopeptidase C [Amino acid transport and me 98.6
PF0812741 Propeptide_C1: Peptidase family C1 propeptide; Int 98.19
PF0824658 Inhibitor_I29: Cathepsin propeptide inhibitor doma 97.03
PF05543175 Peptidase_C47: Staphopain peptidase C47; InterPro: 96.84
KOG4128|consensus457 96.47
PF13529144 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3 95.79
smart0084857 Inhibitor_I29 Cathepsin propeptide inhibitor domai 95.46
PF09778212 Guanylate_cyc_2: Guanylylate cyclase; InterPro: IP 89.61
PF14399 317 Transpep_BrtH: NlpC/p60-like transpeptidase 88.92
COG4990195 Uncharacterized protein conserved in bacteria [Fun 86.54
>KOG1542|consensus Back     alignment and domain information 
Probab=100.00  E-value=5.2e-69  Score=488.60  Aligned_cols=272  Identities=22%  Similarity=0.419  Sum_probs=226.5

Q ss_pred             cccccCcHHHHHHHHhCCC-cEEEeec-CCCCCcHHHHHHHccccccCCCCCCCCCCCCCCccCCCCCCCCCCceecCcc
Q psy15353         16 GELYKFSDAYIDQINREAN-TWTAGRN-FPANLSEEYLRQFLIADAKYFDQSDRPLPGDRKTYDPEYSATVPDRFDAREQ   93 (344)
Q Consensus        16 ~~~~~~~~~~I~~~N~~~~-~~~~~~n-f~~~~~~e~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~D~R~~   93 (344)
                      ..++..|...++++++... +.+.|+| |+|+|.+||.+.+++.+....   +.+..  ...........||++||||++
T Consensus        92 l~iF~~N~~~a~~~q~~d~gsA~yGvtqFSDlT~eEFkk~~l~~~~~~~---~~~~~--~~~~~~~~~~~lP~~fDWR~k  166 (372)
T KOG1542|consen   92 LSIFKHNLLRAERLQENDPGSAEYGVTQFSDLTEEEFKKIYLGVKRRGS---KLPGD--AAEAPIEPGESLPESFDWRDK  166 (372)
T ss_pred             HHHHHHHHHHHHHhhhcCccccccCccchhhcCHHHHHHHhhccccccc---cCccc--cccCcCCCCCCCCcccchhcc
Confidence            3467778888888888876 8999999 998888888888887766311   22211  122223566789999999999


Q ss_pred             CCCCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHhhcCcCCCCCCCCCCCCchhHHHHHHHHc-
Q psy15353         94 WPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVASCCKICRYDDNKSCSHGSVFRTWNFLHKR-  172 (344)
Q Consensus        94 ~~~~~~i~pv~dQg~cgsCwAfA~~~~le~~~~i~~~~~~~~~lS~q~l~dc~~~~~~~~~~gC~GG~~~~a~~~~~~~-  172 (344)
                          |.||||||||+||||||||+++++|.+++|++++  .+.||||+|+||.. +    ++||+||.+..||+|+++. 
T Consensus       167 ----gaVTpVKnQG~CGSCWAFS~tG~vEga~~i~~g~--LvsLSEQeLvDCD~-~----d~gC~GGl~~nA~~~~~~~g  235 (372)
T KOG1542|consen  167 ----GAVTPVKNQGMCGSCWAFSTTGAVEGAWAIATGK--LVSLSEQELVDCDS-C----DNGCNGGLMDNAFKYIKKAG  235 (372)
T ss_pred             ----CCccccccCCcCcchhhhhhhhhhhhHHHhhcCc--ccccchhhhhcccC-c----CCcCCCCChhHHHHHHHHhC
Confidence                9999999999999999999999999999999985  59999999999984 3    4899999999999996555 


Q ss_pred             CCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCC-CCCCCCCCCccccccccCCCCcceeeeceeeeeeeEEeCCcHHHHHH
Q psy15353        173 GSVTGGDYGDRTGCQPSTISPCSHHGSAPTLP-SCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKK  251 (344)
Q Consensus       173 Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~~-~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~  251 (344)
                      |+..|.+|       ||+          +..+ .|...              ..     ....++..+..++.++++|.+
T Consensus       236 GL~~E~dY-------PY~----------g~~~~~C~~~--------------~~-----~~~v~I~~f~~l~~nE~~ia~  279 (372)
T KOG1542|consen  236 GLEKEKDY-------PYT----------GKKGNQCHFD--------------KS-----KIVVSIKDFSMLSNNEDQIAA  279 (372)
T ss_pred             CccccccC-------Ccc----------ccCCCccccc--------------hh-----hceEEEeccEecCCCHHHHHH
Confidence            89999999       999          6555 56554              11     113345666778889999999


Q ss_pred             HHHhCCCEEEEEEecCCcccCCCceEec--CCCCCCCCCCeEEEEEEeccCC-CeeeEEEEcCCCCCCCCCCeEEEEccC
Q psy15353        252 EILAHGPTTATFALYDDFYHYKSGVYKH--TSNAKLENYLHSGKLIGWGTEN-GTPYWLVINTWGPHWGDRGTVKILRGK  328 (344)
Q Consensus       252 ~l~~~gPV~v~~~v~~~f~~y~~Giy~~--~~~~~~~~~~Hav~iVGyg~~~-g~~ywivkNSWG~~WG~~Gy~~i~~g~  328 (344)
                      .|.++|||+|+|++ ..+|.|++||..+  ..|+.... +|+|+|||||... .++|||||||||++|||+||||+.||.
T Consensus       280 wLv~~GPi~vgiNa-~~mQ~YrgGV~~P~~~~Cs~~~~-~HaVLlvGyG~~g~~~PYWIVKNSWG~~WGE~GY~~l~RG~  357 (372)
T KOG1542|consen  280 WLVTFGPLSVGINA-KPMQFYRGGVSCPSKYICSPKLL-NHAVLLVGYGSSGYEKPYWIVKNSWGTSWGEKGYYKLCRGS  357 (372)
T ss_pred             HHHhcCCeEEEEch-HHHHHhcccccCCCcccCCcccc-CceEEEEeecCCCCCCceEEEECCccccccccceEEEeccc
Confidence            99999999999996 5799999999987  34566655 8999999999988 899999999999999999999999999


Q ss_pred             Ccccccccceeee
Q psy15353        329 YECAFEYLIAAGK  341 (344)
Q Consensus       329 ~~cgi~~~~~~~~  341 (344)
                      |.|||++++.++.
T Consensus       358 N~CGi~~mvss~~  370 (372)
T KOG1542|consen  358 NACGIADMVSSAA  370 (372)
T ss_pred             cccccccchhhhh
Confidence            9999999998764

>PTZ00203 cathepsin L protease; Provisional Back     alignment and domain information
>KOG1543|consensus Back     alignment and domain information
>PTZ00021 falcipain-2; Provisional Back     alignment and domain information
>cd02620 Peptidase_C1A_CathepsinB Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>PTZ00200 cysteine proteinase; Provisional Back     alignment and domain information
>cd02621 Peptidase_C1A_CathepsinC Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>cd02698 Peptidase_C1A_CathepsinX Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>PTZ00049 cathepsin C-like protein; Provisional Back     alignment and domain information
>cd02248 Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>PTZ00364 dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>KOG1544|consensus Back     alignment and domain information
>PF00112 Peptidase_C1: Papain family cysteine protease This is family C1 in the peptidase classification Back     alignment and domain information
>smart00645 Pept_C1 Papain family cysteine protease Back     alignment and domain information
>cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>PTZ00462 Serine-repeat antigen protein; Provisional Back     alignment and domain information
>COG4870 Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00585 Peptidase_C1B Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC) Back     alignment and domain information
>PF03051 Peptidase_C1_2: Peptidase C1-like family This family is a subfamily of the Prosite entry; InterPro: IPR004134 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG3579 PepC Aminopeptidase C [Amino acid transport and metabolism] Back     alignment and domain information
>PF08127 Propeptide_C1: Peptidase family C1 propeptide; InterPro: IPR012599 This domain is found at the N-terminal of cathepsin B and cathepsin B-like peptidases that belong to MEROPS peptidase subfamily C1A Back     alignment and domain information
>PF08246 Inhibitor_I29: Cathepsin propeptide inhibitor domain (I29); InterPro: IPR013201 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively Back     alignment and domain information
>PF05543 Peptidase_C47: Staphopain peptidase C47; InterPro: IPR008750 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG4128|consensus Back     alignment and domain information
>PF13529 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3ERV_A Back     alignment and domain information
>smart00848 Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>PF09778 Guanylate_cyc_2: Guanylylate cyclase; InterPro: IPR018616 Members of this family of proteins catalyse the conversion of guanosine triphosphate (GTP) to 3',5'-cyclic guanosine monophosphate (cGMP) and pyrophosphate Back     alignment and domain information
>PF14399 Transpep_BrtH: NlpC/p60-like transpeptidase Back     alignment and domain information
>COG4990 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query344
1mir_A322 Rat Procathepsin B Length = 322 4e-58
1pbh_A317 Crystal Structure Of Human Recombinant Procathepsin 7e-56
1cpj_A260 Crystal Structures Of Recombinant Rat Cathepsin B A 6e-53
1cte_A254 Crystal Structures Of Recombinant Rat Cathepsin B A 7e-53
3k9m_A254 Cathepsin B In Complex With Stefin A Length = 254 4e-51
1gmy_A261 Cathepsin B Complexed With Dipeptidyl Nitrile Inhib 4e-51
3ai8_B256 Cathepsin B In Complex With The Nitroxoline Length 4e-51
3qsd_A254 Structure Of Cathepsin B1 From Schistosoma Mansoni 6e-51
1qdq_A253 X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 9e-51
3cbj_A266 Chagasin-cathepsin B Complex Length = 266 1e-50
1ito_A256 Crystal Structure Analysis Of Bovine Spleen Catheps 2e-50
3mor_A317 Crystal Structure Of Cathepsin B From Trypanosoma B 4e-38
3hhi_A325 Crystal Structure Of Cathepsin B From T. Brucei In 6e-38
4hwy_A340 Trypanosoma Brucei Procathepsin B Solved From 40 Fs 8e-38
1huc_B205 The Refined 2.15 Angstroms X-Ray Crystal Structure 6e-37
1sp4_B205 Crystal Structure Of Ns-134 In Complex With Bovine 1e-36
3pdf_A441 Discovery Of Novel Cyanamide-Based Inhibitors Of Ca 7e-20
1jqp_A438 Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric 1e-18
8pch_A220 Crystal Structure Of Porcine Cathepsin H Determined 1e-14
3qj3_A331 Structure Of Digestive Procathepsin L2 Proteinase F 9e-14
2o6x_A310 Crystal Structure Of Procathepsin L1 From Fasciola 6e-12
7pck_A314 Crystal Structure Of Wild Type Human Procathepsin K 1e-11
1glo_A217 Crystal Structure Of Cys25ser Mutant Of Human Cathe 1e-11
3iej_A222 Pyrazole-Based Cathepsin S Inhibitors With Arylalky 1e-11
2c0y_A315 The Crystal Structure Of A Cys25ala Mutant Of Human 2e-11
2fye_A217 Mutant Human Cathepsin S With Irreversible Inhibito 2e-11
1s4v_A229 The 2.0 A Crystal Structure Of The Kdel-Tailed Cyst 3e-11
1deu_A277 Crystal Structure Of Human Procathepsin X: A Cystei 3e-11
3mpe_A220 Crystal Structure Of Human Cathepsin-S C25s Mutant 4e-11
3kwn_A219 Cathepsin S In Complex With Thioether Acetamide P3 4e-11
3ovx_A218 Cathepsin S In Complex With A Covalent Inhibitor Wi 7e-11
2fq9_A225 Cathepsin S With Nitrile Inhibitor Length = 225 7e-11
3n3g_A217 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitri 8e-11
2f1g_A220 Cathepsin S In Complex With Non-Covalent 2-(Benzoxa 8e-11
1npz_A217 Crystal Structures Of Cathepsin S Inhibitor Complex 9e-11
2g6d_A217 Human Cathepsin S Mutant With Vinyl Sulfone Inhibit 9e-11
1ms6_A222 Dipeptide Nitrile Inhibitor Bound To Cathepsin S. L 1e-10
1ef7_A242 Crystal Structure Of Human Cathepsin X Length = 242 2e-10
1mem_A215 Crystal Structure Of Cathepsin K Complexed With A P 1e-09
1u9v_A217 Crystal Structure Of The Cysteine Protease Human Ca 1e-09
3h7d_A215 The Crystal Structure Of The Cathepsin K Variant M5 1e-09
1snk_A214 Cathepsin K Complexed With Carbamate Derivatized No 1e-09
2f7d_A215 A Mutant Rabbit Cathepsin K With A Nitrile Inhibito 2e-09
1sp4_A48 Crystal Structure Of Ns-134 In Complex With Bovine 4e-09
3h6s_A221 Strucure Of Clitocypin - Cathepsin V Complex Length 6e-09
3ovz_A213 Cathepsin K In Complex With A Covalent Inhibitor Wi 9e-09
1fh0_A221 Crystal Structure Of Human Cathepsin V Complexed Wi 1e-08
1vsn_A215 Crystal Structure Of A Potent Small Molecule Inhibi 3e-08
3p5w_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 3e-08
3p5u_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 3e-08
1cqd_A221 The 2.1 Angstrom Structure Of A Cysteine Protease W 4e-08
1aec_A218 Crystal Structure Of Actinidin-E-64 Complex+ Length 5e-08
2act_A220 Crystallographic Refinement Of The Structure Of Act 5e-08
3bcn_A209 Crystal Structure Of A Papain-Like Cysteine Proteas 7e-08
2pns_A208 1.9 Angstrom Resolution Crystal Structure Of A Plan 2e-07
1iwd_A215 Proposed Amino Acid Sequence And The 1.63 Angstrom 2e-07
1huc_A47 The Refined 2.15 Angstroms X-Ray Crystal Structure 4e-07
1o0e_A208 1.9 Angstrom Crystal Structure Of A Plant Cysteine 4e-07
2p7u_A215 The Crystal Structure Of Rhodesain, The Major Cyste 9e-07
1k3b_C69 Crystal Structure Of Human Dipeptidyl Peptidase I ( 9e-07
1cjl_A312 Crystal Structure Of A Cysteine Protease Proform Le 1e-06
3qt4_A329 Structure Of Digestive Procathepsin L 3 Of Tenebrio 1e-06
1yal_A218 Carica Papaya Chymopapain At 1.7 Angstroms Resoluti 3e-06
1yvb_A241 The Plasmodium Falciparum Cysteine Protease Falcipa 3e-06
3pnr_A240 Structure Of Pbicp-C In Complex With Falcipain-2 Le 4e-06
2fo5_A262 Crystal Structure Of Recombinant Barley Cysteine En 4e-06
3hwn_A258 Cathepsin L With Az13010160 Length = 258 4e-06
3hha_A220 Crystal Structure Of Cathepsin L In Complex With Az 5e-06
3h89_A220 A Combined Crystallographic And Molecular Dynamics 5e-06
3of8_A221 Structural Basis For Reversible And Irreversible In 6e-06
1k3b_B164 Crystal Structure Of Human Dipeptidyl Peptidase I ( 6e-06
3bc3_A220 Exploring Inhibitor Binding At The S Subsites Of Ca 6e-06
3iv2_A220 Crystal Structure Of Mature Apo-Cathepsin L C25a Mu 6e-06
2b1m_A246 Crystal Structure Of A Papain-Fold Protein Without 6e-06
2nqd_B221 Crystal Structure Of Cysteine Protease Inhibitor, C 6e-06
3kse_A220 Unreduced Cathepsin L In Complex With Stefin A Leng 8e-06
1cs8_A316 Crystal Structure Of Procathepsin L Length = 316 9e-06
3ch2_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 9e-06
2wbf_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 9e-06
2vhs_A217 Cathsilicatein, A Chimera Length = 217 9e-06
3f75_A224 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 9e-06
1ewp_A215 Cruzain Bound To Mor-Leu-Hpq Length = 215 2e-05
3tnx_A363 Structure Of The Precursor Of A Thermostable Varian 2e-05
1aim_A215 Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluor 3e-05
3iut_A221 The Crystal Structure Of Cruzain In Complex With A 5e-05
3hd3_A215 High Resolution Crystal Structure Of Cruzain Bound 5e-05
3bpm_A243 Crystal Structure Of Falcipain-3 With Its Inhibitor 1e-04
1xkg_A312 Crystal Structure Of The Major House Dust Mite Alle 3e-04
2as8_A222 Crystal Structure Of Mature And Fully Active Der P 3e-04
3f5v_A222 C2 Crystal Form Of Mite Allergen Der P 1 Length = 2 3e-04
3rvw_A222 Crystal Structure Of Der P 1 Complexed With Fab 4c1 4e-04
1gec_E216 Glycyl Endopeptidase-complex With Benzyloxycarbonyl 5e-04
3ioq_A213 Crystal Structure Of The Carica Candamarcensis Cyst 7e-04
3d6s_A223 Crystal Structure Of Mite Allergen Der F 1 Length = 7e-04
>pdb|1MIR|A Chain A, Rat Procathepsin B Length = 322 Back     alignment and structure 
Iteration: 1

 Score =  221 bits (563), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 128/329 (38%), Positives = 173/329 (52%), Gaps = 23/329 (6%)
Query: 18  LYKFSDAYIDQINREANTWTAGRNFPANLSEEYLRQF---LIADAKYFDQSDRPLPGDRK 74
            +  SD  I+ IN++  TW AGRNF  N+   YL++    ++   K        LP +R 
Sbjct: 6   FHPLSDDMINYINKQNTTWQAGRNF-YNVDISYLKKLCGTVLGGPK--------LP-ERV 55
Query: 75  TYDPEYSATVPDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQN 134
            +  + +  +P+ FDAREQW NC TI  + D G+C +   F AV A SDR CI + G+ N
Sbjct: 56  GFSEDIN--LPESFDAREQWSNCPTIAQIRDQGSCGSSWAFGAVEAMSDRICIHTNGRVN 113
Query: 135 RPLSTEYVASCCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPC 194
             +S E + +CC I   D    C+ G     WNF  ++G V+GG Y    GC P TI PC
Sbjct: 114 VEVSAEDLLTCCGIQCGD---GCNGGYPSGAWNFWTRKGLVSGGVYNSHIGCLPYTIPPC 170
Query: 195 SHHGSAPTLPSCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEIL 254
            HH +    P       PK  C+  C    Y   + +DKH    +Y V D+E  I  EI 
Sbjct: 171 EHHVNGARPPCTGEGDTPK--CNKMC-EAGYSTSYKEDKHYGYTSYSVSDSEKEIMAEIY 227
Query: 255 AHGPTTATFALYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGP 314
            +GP    F ++ DF  YKSGVYKH +   +    H+ +++GWG ENG PYWLV N+W  
Sbjct: 228 KNGPVEGAFTVFSDFLTYKSGVYKHEAGDVMGG--HAIRILGWGIENGVPYWLVANSWNA 285
Query: 315 HWGDRGTVKILRGKYECAFEYLIAAGKPK 343
            WGD G  KILRG+  C  E  I AG P+
Sbjct: 286 DWGDNGFFKILRGENHCGIESEIVAGIPR 314
>pdb|1PBH|A Chain A, Crystal Structure Of Human Recombinant Procathepsin B At 3.2 Angstrom Resolution Length = 317 Back     alignment and structure
>pdb|1CPJ|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 260 Back     alignment and structure
>pdb|1CTE|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 254 Back     alignment and structure
>pdb|3K9M|A Chain A, Cathepsin B In Complex With Stefin A Length = 254 Back     alignment and structure
>pdb|1GMY|A Chain A, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor Length = 261 Back     alignment and structure
>pdb|3AI8|B Chain B, Cathepsin B In Complex With The Nitroxoline Length = 256 Back     alignment and structure
>pdb|3QSD|A Chain A, Structure Of Cathepsin B1 From Schistosoma Mansoni In Complex With Ca074 Inhibitor Length = 254 Back     alignment and structure
>pdb|1QDQ|A Chain A, X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 Complex Length = 253 Back     alignment and structure
>pdb|3CBJ|A Chain A, Chagasin-cathepsin B Complex Length = 266 Back     alignment and structure
>pdb|1ITO|A Chain A, Crystal Structure Analysis Of Bovine Spleen Cathepsin B- E64c Complex Length = 256 Back     alignment and structure
>pdb|3MOR|A Chain A, Crystal Structure Of Cathepsin B From Trypanosoma Brucei Length = 317 Back     alignment and structure
>pdb|3HHI|A Chain A, Crystal Structure Of Cathepsin B From T. Brucei In Complex With Ca074 Length = 325 Back     alignment and structure
>pdb|4HWY|A Chain A, Trypanosoma Brucei Procathepsin B Solved From 40 Fs Free-electron Laser Pulse Data By Serial Femtosecond X-ray Crystallography Length = 340 Back     alignment and structure
>pdb|1HUC|B Chain B, The Refined 2.15 Angstroms X-Ray Crystal Structure Of Human Liver Cathepsin B: The Structural Basis For Its Specificity Length = 205 Back     alignment and structure
>pdb|1SP4|B Chain B, Crystal Structure Of Ns-134 In Complex With Bovine Cathepsin B: A Two Headed Epoxysuccinyl Inhibitor Extends Along The Whole Active Site Cleft Length = 205 Back     alignment and structure
>pdb|3PDF|A Chain A, Discovery Of Novel Cyanamide-Based Inhibitors Of Cathepsin C Length = 441 Back     alignment and structure
>pdb|1JQP|A Chain A, Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric Cysteine Protease Of The Papain Family Length = 438 Back     alignment and structure
>pdb|8PCH|A Chain A, Crystal Structure Of Porcine Cathepsin H Determined At 2.1 Angstrom Resolution: Location Of The Mini-Chain C-Terminal Carboxyl Group Defines Cathepsin H Aminopeptidase Function Length = 220 Back     alignment and structure
>pdb|3QJ3|A Chain A, Structure Of Digestive Procathepsin L2 Proteinase From Tenebrio Molitor Larval Midgut Length = 331 Back     alignment and structure
>pdb|2O6X|A Chain A, Crystal Structure Of Procathepsin L1 From Fasciola Hepatica Length = 310 Back     alignment and structure
>pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K Length = 314 Back     alignment and structure
>pdb|1GLO|A Chain A, Crystal Structure Of Cys25ser Mutant Of Human Cathepsin S Length = 217 Back     alignment and structure
>pdb|3IEJ|A Chain A, Pyrazole-Based Cathepsin S Inhibitors With Arylalkynes As P1 Binding Elements Length = 222 Back     alignment and structure
>pdb|2C0Y|A Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human Procathepsin S Length = 315 Back     alignment and structure
>pdb|2FYE|A Chain A, Mutant Human Cathepsin S With Irreversible Inhibitor Cra- 14013 Length = 217 Back     alignment and structure
>pdb|1S4V|A Chain A, The 2.0 A Crystal Structure Of The Kdel-Tailed Cysteine Endopeptidase Functioning In Programmed Cell Death Of Ricinus Communis Endosperm Length = 229 Back     alignment and structure
>pdb|1DEU|A Chain A, Crystal Structure Of Human Procathepsin X: A Cysteine Protease With The Proregion Covalently Linked To The Active Site Cysteine Length = 277 Back     alignment and structure
>pdb|3MPE|A Chain A, Crystal Structure Of Human Cathepsin-S C25s Mutant With Bound Drug Length = 220 Back     alignment and structure
>pdb|3KWN|A Chain A, Cathepsin S In Complex With Thioether Acetamide P3 Inhibitor Length = 219 Back     alignment and structure
>pdb|3OVX|A Chain A, Cathepsin S In Complex With A Covalent Inhibitor With An Aldehyde Warhead Length = 218 Back     alignment and structure
>pdb|2FQ9|A Chain A, Cathepsin S With Nitrile Inhibitor Length = 225 Back     alignment and structure
>pdb|3N3G|A Chain A, 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitrile As Cathepsin S Inhibitors: N3, Not N1 Is Critically Important Length = 217 Back     alignment and structure
>pdb|2F1G|A Chain A, Cathepsin S In Complex With Non-Covalent 2-(Benzoxazol-2-Ylamino)- Acetamide Length = 220 Back     alignment and structure
>pdb|1NPZ|A Chain A, Crystal Structures Of Cathepsin S Inhibitor Complexes Length = 217 Back     alignment and structure
>pdb|2G6D|A Chain A, Human Cathepsin S Mutant With Vinyl Sulfone Inhibitor Cra- 14009 Length = 217 Back     alignment and structure
>pdb|1MS6|A Chain A, Dipeptide Nitrile Inhibitor Bound To Cathepsin S. Length = 222 Back     alignment and structure
>pdb|1EF7|A Chain A, Crystal Structure Of Human Cathepsin X Length = 242 Back     alignment and structure
>pdb|1MEM|A Chain A, Crystal Structure Of Cathepsin K Complexed With A Potent Vinyl Sulfone Inhibitor Length = 215 Back     alignment and structure
>pdb|1U9V|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin K In Complex With The Covalent Inhibitor Nvp-Abe854 Length = 217 Back     alignment and structure
>pdb|3H7D|A Chain A, The Crystal Structure Of The Cathepsin K Variant M5 In Compl Chondroitin-4-Sulfate Length = 215 Back     alignment and structure
>pdb|1SNK|A Chain A, Cathepsin K Complexed With Carbamate Derivatized Norleucine Aldehyde Length = 214 Back     alignment and structure
>pdb|2F7D|A Chain A, A Mutant Rabbit Cathepsin K With A Nitrile Inhibitor Length = 215 Back     alignment and structure
>pdb|1SP4|A Chain A, Crystal Structure Of Ns-134 In Complex With Bovine Cathepsin B: A Two Headed Epoxysuccinyl Inhibitor Extends Along The Whole Active Site Cleft Length = 48 Back     alignment and structure
>pdb|3H6S|A Chain A, Strucure Of Clitocypin - Cathepsin V Complex Length = 221 Back     alignment and structure
>pdb|3OVZ|A Chain A, Cathepsin K In Complex With A Covalent Inhibitor With A Ketoamide Warhead Length = 213 Back     alignment and structure
>pdb|1FH0|A Chain A, Crystal Structure Of Human Cathepsin V Complexed With An Irreversible Vinyl Sulfone Inhibitor Length = 221 Back     alignment and structure
>pdb|1VSN|A Chain A, Crystal Structure Of A Potent Small Molecule Inhibitor Bound To Cathepsin K Length = 215 Back     alignment and structure
>pdb|3P5W|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|3P5U|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|1CQD|A Chain A, The 2.1 Angstrom Structure Of A Cysteine Protease With Proline Specificity From Ginger Rhizome, Zingiber Officinale Length = 221 Back     alignment and structure
>pdb|1AEC|A Chain A, Crystal Structure Of Actinidin-E-64 Complex+ Length = 218 Back     alignment and structure
>pdb|2ACT|A Chain A, Crystallographic Refinement Of The Structure Of Actinidin At 1.7 Angstroms Resolution By Fast Fourier Least-Squares Methods Length = 220 Back     alignment and structure
>pdb|3BCN|A Chain A, Crystal Structure Of A Papain-Like Cysteine Protease Ervatamin-A Complexed With Irreversible Inhibitor E-64 Length = 209 Back     alignment and structure
>pdb|2PNS|A Chain A, 1.9 Angstrom Resolution Crystal Structure Of A Plant Cysteine Protease Ervatamin-C Refinement With Cdna Derived Amino Acid Sequence Length = 208 Back     alignment and structure
>pdb|1IWD|A Chain A, Proposed Amino Acid Sequence And The 1.63 Angstrom X-ray Crystal Structure Of A Plant Cysteine Protease Ervatamin B: Insight Into The Structural Basis Of Its Stability And Substrate Specificity Length = 215 Back     alignment and structure
>pdb|1HUC|A Chain A, The Refined 2.15 Angstroms X-Ray Crystal Structure Of Human Liver Cathepsin B: The Structural Basis For Its Specificity Length = 47 Back     alignment and structure
>pdb|1O0E|A Chain A, 1.9 Angstrom Crystal Structure Of A Plant Cysteine Protease Ervatamin C Length = 208 Back     alignment and structure
>pdb|2P7U|A Chain A, The Crystal Structure Of Rhodesain, The Major Cysteine Protease Of T. Brucei Rhodesiense, Bound To Inhibitor K777 Length = 215 Back     alignment and structure
>pdb|1K3B|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 69 Back     alignment and structure
>pdb|1CJL|A Chain A, Crystal Structure Of A Cysteine Protease Proform Length = 312 Back     alignment and structure
>pdb|3QT4|A Chain A, Structure Of Digestive Procathepsin L 3 Of Tenebrio Molitor Larval Midgut Length = 329 Back     alignment and structure
>pdb|1YAL|A Chain A, Carica Papaya Chymopapain At 1.7 Angstroms Resolution Length = 218 Back     alignment and structure
>pdb|1YVB|A Chain A, The Plasmodium Falciparum Cysteine Protease Falcipain-2 Length = 241 Back     alignment and structure
>pdb|3PNR|A Chain A, Structure Of Pbicp-C In Complex With Falcipain-2 Length = 240 Back     alignment and structure
>pdb|2FO5|A Chain A, Crystal Structure Of Recombinant Barley Cysteine Endoprotease B Isoform 2 (Ep-B2) In Complex With Leupeptin Length = 262 Back     alignment and structure
>pdb|3HWN|A Chain A, Cathepsin L With Az13010160 Length = 258 Back     alignment and structure
>pdb|3HHA|A Chain A, Crystal Structure Of Cathepsin L In Complex With Az12878478 Length = 220 Back     alignment and structure
>pdb|3H89|A Chain A, A Combined Crystallographic And Molecular Dynamics Study Of Cathepsin-L Retro-Binding Inhibitors(Compound 4) Length = 220 Back     alignment and structure
>pdb|3OF8|A Chain A, Structural Basis For Reversible And Irreversible Inhibition Of Human Cathepsin L By Their Respective Dipeptidyl Glyoxal And Diazomethylketone Inhibitors Length = 221 Back     alignment and structure
>pdb|1K3B|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 164 Back     alignment and structure
>pdb|3BC3|A Chain A, Exploring Inhibitor Binding At The S Subsites Of Cathepsin L Length = 220 Back     alignment and structure
>pdb|3IV2|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant Length = 220 Back     alignment and structure
>pdb|2B1M|A Chain A, Crystal Structure Of A Papain-Fold Protein Without The Catalytic Cysteine From Seeds Of Pachyrhizus Erosus Length = 246 Back     alignment and structure
>pdb|2NQD|B Chain B, Crystal Structure Of Cysteine Protease Inhibitor, Chagasin, In Complex With Human Cathepsin L Length = 221 Back     alignment and structure
>pdb|3KSE|A Chain A, Unreduced Cathepsin L In Complex With Stefin A Length = 220 Back     alignment and structure
>pdb|1CS8|A Chain A, Crystal Structure Of Procathepsin L Length = 316 Back     alignment and structure
>pdb|3CH2|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum Length = 265 Back     alignment and structure
>pdb|2WBF|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum With Loop 690-700 Ordered Length = 265 Back     alignment and structure
>pdb|2VHS|A Chain A, Cathsilicatein, A Chimera Length = 217 Back     alignment and structure
>pdb|3F75|A Chain A, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 224 Back     alignment and structure
>pdb|1EWP|A Chain A, Cruzain Bound To Mor-Leu-Hpq Length = 215 Back     alignment and structure
>pdb|3TNX|A Chain A, Structure Of The Precursor Of A Thermostable Variant Of Papain At 2.6 Angstroem Resolution Length = 363 Back     alignment and structure
>pdb|1AIM|A Chain A, Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluoromethylketone Length = 215 Back     alignment and structure
>pdb|3IUT|A Chain A, The Crystal Structure Of Cruzain In Complex With A Tetrafluorophenoxymethyl Ketone Inhibitor Length = 221 Back     alignment and structure
>pdb|3HD3|A Chain A, High Resolution Crystal Structure Of Cruzain Bound To The Vinyl Sulfone Inhibitor Smdc-256047 Length = 215 Back     alignment and structure
>pdb|3BPM|A Chain A, Crystal Structure Of Falcipain-3 With Its Inhibitor, Leupeptin Length = 243 Back     alignment and structure
>pdb|1XKG|A Chain A, Crystal Structure Of The Major House Dust Mite Allergen Der P 1 In Its Pro Form At 1.61 A Resolution Length = 312 Back     alignment and structure
>pdb|2AS8|A Chain A, Crystal Structure Of Mature And Fully Active Der P 1 Allergen Length = 222 Back     alignment and structure
>pdb|3F5V|A Chain A, C2 Crystal Form Of Mite Allergen Der P 1 Length = 222 Back     alignment and structure
>pdb|3RVW|A Chain A, Crystal Structure Of Der P 1 Complexed With Fab 4c1 Length = 222 Back     alignment and structure
>pdb|1GEC|E Chain E, Glycyl Endopeptidase-complex With Benzyloxycarbonyl-leucine-valine- Glycine-methylene Covalently Bound To Cysteine 25 Length = 216 Back     alignment and structure
>pdb|3IOQ|A Chain A, Crystal Structure Of The Carica Candamarcensis Cysteine Protease Cms1ms2 In Complex With E-64 Length = 213 Back     alignment and structure
>pdb|3D6S|A Chain A, Crystal Structure Of Mite Allergen Der F 1 Length = 223 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query344
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 1e-108
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 2e-98
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 2e-96
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 8e-96
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 6e-65
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 3e-59
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 3e-33
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 1e-22
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 7e-18
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 1e-17
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 3e-17
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 1e-16
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 2e-16
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 1e-15
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 1e-15
1cqd_A221 Protein (protease II); cysteine protease, glycopro 1e-15
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 1e-15
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 2e-15
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 2e-15
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 2e-15
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 2e-15
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 3e-15
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 4e-15
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 5e-15
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 1e-14
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 2e-14
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 3e-14
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 3e-14
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 4e-14
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 1e-13
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 3e-13
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 5e-13
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 5e-13
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 8e-13
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 3e-12
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 7e-12
3u8e_A222 Papain-like cysteine protease; papain-like cystein 3e-11
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 3e-11
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 3e-10
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Length = 317 Back     alignment and structure
 Score =  317 bits (814), Expect = e-108
 Identities = 122/329 (37%), Positives = 165/329 (50%), Gaps = 17/329 (5%)

Query: 15  RGELYKFSDAYIDQINREANTWTAGRNFPANLSEEYLRQFLIADAKYFDQSDRPLPGDRK 74
           R   +  SD  ++ +N+   TW AG NF  N+   YL++        F    +P      
Sbjct: 4   RPSFHPLSDELVNYVNKRNTTWQAGHNF-YNVDMSYLKRLCGT----FLGGPKPPQRVMF 58

Query: 75  TYDPEYSATVPDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQN 134
           T D      +P  FDAREQWP C TI  + D G+C +   F AV A SDR CI +    +
Sbjct: 59  TED----LKLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVS 114

Query: 135 RPLSTEYVASCCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPC 194
             +S E + +CC          C+ G     WNF  ++G V+GG Y    GC+P +I PC
Sbjct: 115 VEVSAEDLLTCCGSMC---GDGCNGGYPAEAWNFWTRKGLVSGGLYESHVGCRPYSIPPC 171

Query: 195 SHHGSAPTLPSCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEIL 254
            HH +    P       PK  C   C  P Y   + QDKH    +Y V ++E  I  EI 
Sbjct: 172 EHHVNGSRPPCTGEGDTPK--CSKIC-EPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIY 228

Query: 255 AHGPTTATFALYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGP 314
            +GP    F++Y DF  YKSGVY+H +   +    H+ +++GWG ENGTPYWLV N+W  
Sbjct: 229 KNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGG--HAIRILGWGVENGTPYWLVANSWNT 286

Query: 315 HWGDRGTVKILRGKYECAFEYLIAAGKPK 343
            WGD G  KILRG+  C  E  + AG P+
Sbjct: 287 DWGDNGFFKILRGQDHCGIESEVVAGIPR 315
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} PDB: 3mor_A* Length = 325 Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Length = 266 Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} PDB: 3s3q_A* 3s3r_A* Length = 254 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Length = 441 Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Length = 277 Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Length = 291 Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Length = 265 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Length = 215 Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Length = 220 Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Length = 214 Back     alignment and structure
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} Length = 331 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Length = 216 Back     alignment and structure
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A Length = 220 Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Length = 215 Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Length = 221 Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Length = 215 Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Length = 310 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Length = 218 Back     alignment and structure
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A* Length = 222 Back     alignment and structure
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Length = 322 Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Length = 314 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Length = 329 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Length = 246 Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Length = 218 Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Length = 315 Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Length = 312 Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Length = 243 Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Length = 241 Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Length = 220 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Length = 229 Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 224 Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Length = 316 Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Length = 262 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Length = 212 Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} Length = 213 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} Length = 222 Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Length = 214 Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Length = 208 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query344
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 100.0
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 100.0
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 100.0
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 100.0
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 100.0
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 100.0
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 100.0
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 100.0
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 100.0
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 100.0
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 100.0
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 100.0
3tnx_A363 Papain; hydrolase, cytoplasm for recombinant expre 100.0
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 100.0
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 100.0
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 100.0
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 100.0
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 100.0
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 100.0
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 100.0
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 100.0
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 100.0
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 100.0
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 100.0
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 100.0
3u8e_A222 Papain-like cysteine protease; papain-like cystein 100.0
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 100.0
1cqd_A221 Protein (protease II); cysteine protease, glycopro 100.0
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 100.0
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 100.0
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 100.0
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 100.0
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 100.0
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 100.0
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 100.0
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 100.0
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 100.0
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 100.0
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 100.0
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 100.0
2cb5_A453 Protein (bleomycin hydrolase); aminopeptidase, cys 100.0
2e01_A457 Cysteine proteinase 1; bleomycin hydrolase, thiol 100.0
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 100.0
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 97.76
1pxv_A183 Cysteine protease; hydrolase; 1.80A {Staphylococcu 97.74
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 97.58
1cv8_A174 Staphopain; cysteine protease, thiol protease, pap 97.37
1x9y_A367 Cysteine proteinase; half-barrel, barrel-sandwich- 97.33
3erv_A236 Putative C39-like peptidase; structural genomics, 91.69
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Back     alignment and structure
Probab=100.00  E-value=1.9e-81  Score=590.69  Aligned_cols=310  Identities=38%  Similarity=0.787  Sum_probs=275.5

Q ss_pred             ccccCcHHHHHHHHhCCCcEEEeecCCCCCcHHHHHHHccccccCCCCCCCCCCCCCCccCCCCCCCCCCceecCccCCC
Q psy15353         17 ELYKFSDAYIDQINREANTWTAGRNFPANLSEEYLRQFLIADAKYFDQSDRPLPGDRKTYDPEYSATVPDRFDAREQWPN   96 (344)
Q Consensus        17 ~~~~~~~~~I~~~N~~~~~~~~~~nf~~~~~~e~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~D~R~~~~~   96 (344)
                      .+.++++++|++||+.+.+|++++||+ ++++||+++++|......   ...     .........+||++||||++||+
T Consensus         6 ~~~~~~~~~i~~~N~~~~~~~~~~nf~-~~~~e~~~~~lg~~~~~~---~~~-----~~~~~~~~~~lP~s~DwR~~~~~   76 (317)
T 3pbh_A            6 SFHPLSDELVNYVNKRNTTWQAGHNFY-NVDMSYLKRLCGTFLGGP---KPP-----QRVMFTEDLKLPASFDAREQWPQ   76 (317)
T ss_dssp             SCCSSCHHHHHHHHHHTCSEEECCCCS-SCCHHHHHHTCCBCTTCC---CCS-----EEECCCSCCCCCSSEEHHHHCTT
T ss_pred             ccCcccHHHHHHHHCCCCCeEEeeccc-cCCHHHHHHHcCCCCCcc---ccC-----cccccccccCCCCCEechhccCC
Confidence            356789999999999988999999998 889999999999865433   211     11111223689999999999999


Q ss_pred             CCCCccCCCCCCCCchHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHhhcC-cCCCCCCCCCCCCchhHHHHHHHHcCCC
Q psy15353         97 CGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVASCCK-ICRYDDNKSCSHGSVFRTWNFLHKRGSV  175 (344)
Q Consensus        97 ~~~i~pv~dQg~cgsCwAfA~~~~le~~~~i~~~~~~~~~lS~q~l~dc~~-~~~~~~~~gC~GG~~~~a~~~~~~~Gi~  175 (344)
                      |+.|+||||||.||||||||++++||++++|++++...+.||+|+|+||+. .+    +.||+||++..||+|++++||+
T Consensus        77 c~~vtpVkdQg~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~----~~GC~GG~~~~A~~yi~~~Gi~  152 (317)
T 3pbh_A           77 CPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMC----GDGCNGGYPAEAWNFWTRKGLV  152 (317)
T ss_dssp             CGGGTCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTT----BCGGGCBCHHHHHHHHHHTCEE
T ss_pred             CCCcCCccccCCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccC----CCCCCCCCHHHHHHHHHHhCCC
Confidence            999999999999999999999999999999998865569999999999986 33    3899999999999999999999


Q ss_pred             CCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCcceeeeceeeeeeeEEeCCcHHHHHHHHHh
Q psy15353        176 TGGDYGDRTGCQPSTISPCSHHGSAPTLPSCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILA  255 (344)
Q Consensus       176 ~e~~y~~~e~c~PY~~~~~~~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~  255 (344)
                      +|++|.+.++|+||.+.+|+|+.. +..+.|... ...+.|...| ...+.+.+..+..+....+.++.++++||++|++
T Consensus       153 te~~Y~~~~~c~PY~~~~c~~~~~-~~~~~C~~~-~~~~~c~~~c-~~~~~~~~~~~~~~~~~~~~v~~~e~~i~~~i~~  229 (317)
T 3pbh_A          153 SGGLYESHVGCRPYSIPPCEHHVN-GSRPPCTGE-GDTPKCSKIC-EPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYK  229 (317)
T ss_dssp             BBCSTTCCCBSSCCCSCCCCCCCT-TCCSCCCSC-CCCCCCCCSC-CSSCCSCGGGSEECBCCCEEECSCHHHHHHHHHH
T ss_pred             cchhccCCCCCcCcccCccccccc-CcCCCCCCc-CCCCcccccc-cCCCccceeeeeeeeeecccCCcHHHHHHHHHHH
Confidence            999999999999999999999987 778899876 5678899889 7777777777888877778888899999999999


Q ss_pred             CCCEEEEEEecCCcccCCCceEecCCCCCCCCCCeEEEEEEeccCCCeeeEEEEcCCCCCCCCCCeEEEEccCCcccccc
Q psy15353        256 HGPTTATFALYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDRGTVKILRGKYECAFEY  335 (344)
Q Consensus       256 ~gPV~v~~~v~~~f~~y~~Giy~~~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~~~cgi~~  335 (344)
                      +|||+++|+++++|++|++|||.+++ +...+ +|||+|||||+++|++|||||||||++|||+|||||+||.|+||||+
T Consensus       230 ~GPV~v~i~~~~~f~~Y~~GVy~~~~-~~~~~-~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~GY~ri~rg~n~CgI~~  307 (317)
T 3pbh_A          230 NGPVEGAFSVYSDFLLYKSGVYQHVT-GEMMG-GHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIES  307 (317)
T ss_dssp             HCCEEEEEEEEGGGGGEEEEEECCCS-CCEEE-EEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTT
T ss_pred             CCCEEEEEEecccccCCCCcEEccCC-CCCCC-CEEEEEEEEEEeCCeeEEEEEcCCCCCcCCCcEEEEEcCCCcccCCC
Confidence            99999999999999999999999886 76676 79999999999999999999999999999999999999999999999


Q ss_pred             cceeeecCC
Q psy15353        336 LIAAGKPKN  344 (344)
Q Consensus       336 ~~~~~~p~~  344 (344)
                      ++++++|+.
T Consensus       308 ~~~a~~p~~  316 (317)
T 3pbh_A          308 EVVAGIPRT  316 (317)
T ss_dssp             SCEECCBCC
T ss_pred             ceEeeecCC
Confidence            999999974
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A* Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A* Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Back     alignment and structure
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Back     alignment and structure
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Back     alignment and structure
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya} Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1 Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0 Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Back     alignment and structure
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A Back     alignment and structure
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Back     alignment and structure
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Back     alignment and structure
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1 Back     alignment and structure
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4 Back     alignment and structure
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 344
d1gmya_254 d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens 8e-57
g1k3b.1233 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase 2e-30
d1deua_275 d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens 2e-28
g8pch.1228 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [Tax 9e-28
d1m6da_214 d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [Ta 1e-26
d1s4va_224 d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor 2e-25
d2oula1241 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falcip 1e-23
d1cs8a_316 d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens 1e-23
d1fh0a_221 d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens 4e-23
d1aeca_218 d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwi 1e-22
d2h7ja1217 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sa 5e-22
d1yala_218 d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [ 7e-22
d1cqda_216 d.3.1.1 (A:) Proline-specific cysteine protease {G 1e-21
d1ppoa_216 d.3.1.1 (A:) Caricain (protease omega) {Papaya (Ca 2e-21
d1xkga1302 d.3.1.1 (A:4-305) Major mite fecal allergen der p 5e-20
d1me4a_215 d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 56 1e-19
d1iwda_215 d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia 2e-19
d2r6na1215 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sa 5e-19
d1khqa_212 d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId 2e-16
d1o0ea_208 d.3.1.1 (A:) Ervatamin C {East indian rosebay (Erv 2e-15
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Length = 254 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin B
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  183 bits (464), Expect = 8e-57
 Identities = 105/259 (40%), Positives = 138/259 (53%), Gaps = 8/259 (3%)

Query: 85  PDRFDAREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVAS 144
           P  FDAREQWP C TI  + D G+C +   F AV A SDR CI +    +  +S E + +
Sbjct: 3   PASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLT 62

Query: 145 CCKICRYDDNKSCSHGSVFRTWNFLHKRGSVTGGDYGDRTGCQPSTISPCSHHGSAPTLP 204
           CC          C+ G     WNF  ++G V+GG Y    GC+P +I PC HH +    P
Sbjct: 63  CC---GSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESHVGCRPYSIPPCEHHVNGSRPP 119

Query: 205 SCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDAIKKEILAHGPTTATFA 264
                  PK  C   C  P Y   + QDKH    +Y V ++E  I  EI  +GP    F+
Sbjct: 120 CTGEGDTPK--CSKIC-EPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFS 176

Query: 265 LYDDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTENGTPYWLVINTWGPHWGDRGTVKI 324
           +Y DF  YKSGVY+H +   +    H+ +++GWG ENGTPYWLV N+W   WGD G  KI
Sbjct: 177 VYSDFLLYKSGVYQHVTGEMMGG--HAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKI 234

Query: 325 LRGKYECAFEYLIAAGKPK 343
           LRG+  C  E  + AG P+
Sbjct: 235 LRGQDHCGIESEVVAGIPR 253
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Length = 275 Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Length = 214 Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Length = 224 Back     information, alignment and structure
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} Length = 241 Back     information, alignment and structure
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Length = 316 Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Length = 218 Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Length = 217 Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Length = 218 Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Length = 216 Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Length = 216 Back     information, alignment and structure
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Length = 302 Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Length = 215 Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Length = 215 Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Length = 215 Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Length = 212 Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Length = 208 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query344
d1cs8a_316 (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 960 100.0
d1gmya_254 (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 960 100.0
d1xkga1302 Major mite fecal allergen der p 1 {House-dust mite 100.0
g1k3b.1233 Cathepsin C (dipeptidyl peptidase I), catalytic do 100.0
g8pch.1228 Cathepsin H {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1deua_275 (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 960 100.0
d1m6da_214 Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1ppoa_216 Caricain (protease omega) {Papaya (Carica papaya) 100.0
d1yala_218 Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d2h7ja1217 (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 960 100.0
d2r6na1215 (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 960 100.0
d1cqda_216 Proline-specific cysteine protease {Ginger rhizome 100.0
d1me4a_215 Cruzain {Trypanosoma cruzi [TaxId: 5693]} 100.0
d1fh0a_221 (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 960 100.0
d2oula1241 Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} 100.0
d1aeca_218 Actinidin {Chinese gooseberry or kiwifruit (Actini 100.0
d1s4va_224 Vignain (bean endopeptidase) {Castor bean (Ricinus 100.0
d1khqa_212 Papain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d1o0ea_208 Ervatamin C {East indian rosebay (Ervatamia corona 100.0
d1iwda_215 Ervatamin B {Adam's apple (Ervatamia coronaria) [T 100.0
d3gcba_ 458 Bleomycin hydrolase {Baker's yeast (Saccharomyces 99.7
d2cb5a_ 453 Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 99.59
d1cv8a_173 Staphopain StpA {Staphylococcus aureus [TaxId: 128 95.6
d1pxva_183 Staphopain SspB {Staphylococcus aureus [TaxId: 128 94.59
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-63  Score=468.14  Aligned_cols=273  Identities=24%  Similarity=0.424  Sum_probs=217.1

Q ss_pred             ccccccCcHHHHHHHHhC----CCcEEEeec-CCCCCcHHHHHHHccccccCCCCCCCCCCCCCCccCCCCCCCCCCcee
Q psy15353         15 RGELYKFSDAYIDQINRE----ANTWTAGRN-FPANLSEEYLRQFLIADAKYFDQSDRPLPGDRKTYDPEYSATVPDRFD   89 (344)
Q Consensus        15 ~~~~~~~~~~~I~~~N~~----~~~~~~~~n-f~~~~~~e~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~D   89 (344)
                      |..++..|.++|++||++    ..+|++++| |+|++.+||.+.+++......    ..    ..........+||++||
T Consensus        31 R~~iF~~N~~~I~~~N~~~~~~~~~~~~g~N~fsDlt~eEf~~~~~~~~~~~~----~~----~~~~~~~~~~~lP~s~D  102 (316)
T d1cs8a_          31 RRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKP----RK----GKVFQEPLFYEAPRSVD  102 (316)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCC----SC----CEECCCCTTCCCCSCEE
T ss_pred             HHHHHHHHHHHHHHHHhHhhcCCCceEEeceeccccCcHHHHhhhcccccccc----cc----CccccCcccccCCCceE
Confidence            335778899999999985    359999999 997777777666665544322    11    11122345668999999


Q ss_pred             cCccCCCCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHhhcCcCCCCCCCCCCCCchhHHHHHH
Q psy15353         90 AREQWPNCGTIGHVPDTGACAAPHIFAAVGAFSDRRCIKSKGQQNRPLSTEYVASCCKICRYDDNKSCSHGSVFRTWNFL  169 (344)
Q Consensus        90 ~R~~~~~~~~i~pv~dQg~cgsCwAfA~~~~le~~~~i~~~~~~~~~lS~q~l~dc~~~~~~~~~~gC~GG~~~~a~~~~  169 (344)
                      ||++    |+++||||||.||||||||+++++|++++++++.  .+.||+|+|+||+...+   +.+|.||.+..|++|+
T Consensus       103 wr~~----g~vtpVkdQG~CGsCwAfa~~~~~E~~~~i~~~~--~~~lS~Q~lvdC~~~~~---~~~c~gg~~~~a~~y~  173 (316)
T d1cs8a_         103 WREK----GYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGR--LISLSEQNLVDCSGPQG---NEGCNGGLMDYAFQYV  173 (316)
T ss_dssp             GGGG----TCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSC--CCCBCHHHHHHHCGGGT---CCGGGCBCHHHHHHHH
T ss_pred             CCcC----CcccccccCCCCceeeehhhhHHHHHHHHhhcCC--cccchhhhhhhcccccc---CCCCCCCchHHHHHHH
Confidence            9999    9999999999999999999999999999999874  48999999999986544   6899999999999999


Q ss_pred             HHcC-CCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCcceeeeceeeeeeeEEeCCcHHH
Q psy15353        170 HKRG-SVTGGDYGDRTGCQPSTISPCSHHGSAPTLPSCENQKVPKLKCHTRCTNPTYGRGFFQDKHRTTLTYWVDDNEDA  248 (344)
Q Consensus       170 ~~~G-i~~e~~y~~~e~c~PY~~~~~~~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (344)
                      +.+| +.+|..|       ||.          +....|...             .....      ...........+.+.
T Consensus       174 ~~~g~~~~e~~~-------~~~----------~~~~~~~~~-------------~~~~~------~~~~~~~~~~~~~~~  217 (316)
T d1cs8a_         174 QDNGGLDSEESY-------PYE----------ATEESCKYN-------------PKYSV------ANDAGFVDIPKQEKA  217 (316)
T ss_dssp             HHHTCEEBTTTS-------CCC----------SSCCCCCCC-------------GGGEE------ECCCCEEECCSCHHH
T ss_pred             HhcCcccccccc-------ccc----------ccccccccc-------------ccccc------ccccccccccCcHHH
Confidence            9997 5667666       888          444444332             00000      011122345568999


Q ss_pred             HHHHHHhCCCEEEEEEec-CCcccCCCceEecCCCCCCCCCCeEEEEEEeccC----CCeeeEEEEcCCCCCCCCCCeEE
Q psy15353        249 IKKEILAHGPTTATFALY-DDFYHYKSGVYKHTSNAKLENYLHSGKLIGWGTE----NGTPYWLVINTWGPHWGDRGTVK  323 (344)
Q Consensus       249 ik~~l~~~gPV~v~~~v~-~~f~~y~~Giy~~~~~~~~~~~~Hav~iVGyg~~----~g~~ywivkNSWG~~WG~~Gy~~  323 (344)
                      |+++|+.+|||+++|++. ++|+.|++|||..+.|+.... +|||+|||||.+    +|.+|||||||||++|||+||||
T Consensus       218 l~~~l~~~gpv~v~i~~~~~~f~~y~~Gi~~~~~c~~~~~-nHaV~iVGyG~d~~~~~g~~YWIikNSWG~~WGe~GY~r  296 (316)
T d1cs8a_         218 LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDM-DHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVK  296 (316)
T ss_dssp             HHHHHHHHCCEEEEECCCSHHHHTEEEEEECCTTCCSSCC-CEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEE
T ss_pred             HHHHHHHhCCeEEEEEeccchhccccCCcccCCCCCCCcC-CEEEEEEEEcccccCCCCCeEEEEEeCCCCCcccCCEEE
Confidence            999999999999999985 579999999999887665544 799999999954    68999999999999999999999


Q ss_pred             EEccC-Ccccccccceeee
Q psy15353        324 ILRGK-YECAFEYLIAAGK  341 (344)
Q Consensus       324 i~~g~-~~cgi~~~~~~~~  341 (344)
                      |+||. |.|||++++++++
T Consensus       297 i~r~~~n~CGI~~~~~yP~  315 (316)
T d1cs8a_         297 MAKDRRNHCGIASAASYPT  315 (316)
T ss_dssp             EECSSSSGGGTTTSCEEEC
T ss_pred             EeeCCCCcCccCCeeeeee
Confidence            99985 8999999998865
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cv8a_ d.3.1.1 (A:) Staphopain StpA {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1pxva_ d.3.1.1 (A:) Staphopain SspB {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure