Psyllid ID: psy15443

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70---
Protein Sequence
MEMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIYAKAKLPKSAIEHQEKEG
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHcHHHHHHHHHHHHHHHHHHHcccccccccHHHccccc
Coil and Loop (DISEMBL)
MEMFLDKLSEVSRHEVYSraakkpqldperaheplldyEFCKLYKALEAQSADWIYAKAKLPKSAIEHQEKEG
Flexible Loop (DISEMBL)
memfldklsevsrhevysraakkpqldperahePLLDYEFCKLYKALEAQSADWIYAKAKLPKSAiehqekeg
Low Complexity Region (SEG)
MEMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIYAKAKLPKSAIEHQEKEG
Disordered region (IsUnstruct)
*********************************PLLDYEFCKLYKALEAQSADWIYAKA**************
Disordered Region (DISOPRED)
*EMFLDKLSEVSRHEVY**************HEPLLDYEFCKLYKALEAQSA*********************
Disordered Region (DISEMBL)
MEMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIYAKAKLP***********
Disordered Region (DISPRO)
MEMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIYAKA**************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIYAKAKLPKSAIEHQEKEG
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	73	2.2.26 [Sep-21-2011]
Q9Z1Z0	959	General vesicular transpo	yes	N/A	0.753	0.057	0.436	3e-05
P41541	961	General vesicular transpo	yes	N/A	0.753	0.057	0.436	4e-05
O60763	962	General vesicular transpo	yes	N/A	0.753	0.057	0.436	4e-05
P41542	959	General vesicular transpo	yes	N/A	0.753	0.057	0.418	8e-05

>sp|Q9Z1Z0|USO1_MOUSE General vesicular transport factor p115 OS=Mus musculus GN=Uso1 PE=1 SV=2

 Score = 47.0 bits (110), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/55 (43%), Positives = 34/55 (61%)

Query: 2   EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIY 56
           E F++KL  +S+HE+YSRA++KPQ +       + D+EF KL K LE      IY
Sbjct: 575 ENFIEKLGFISKHELYSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIY 629

General vesicular transport factor required for intercisternal transport in the Golgi stack; it is required for transcytotic fusion and/or subsequent binding of the vesicles to the target membrane. May well act as a vesicular anchor by interacting with the target membrane and holding the vesicular and target membranes in proximity.
Mus musculus (taxid: 10090)

>sp|P41541|USO1_BOVIN General vesicular transport factor p115 OS=Bos taurus GN=USO1 PE=1 SV=1

 Score = 46.6 bits (109), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/55 (43%), Positives = 34/55 (61%)

Query: 2   EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIY 56
           E F++KL  +S+HE+YSRA++KPQ +       + D+EF KL K LE      IY
Sbjct: 575 ENFIEKLGFISKHELYSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIY 629

General vesicular transport factor required for intercisternal transport in the Golgi stack; it is required for transcytotic fusion and/or subsequent binding of the vesicles to the target membrane. May well act as a vesicular anchor by interacting with the target membrane and holding the vesicular and target membranes in proximity.

Bos taurus (taxid: 9913)

>sp|O60763|USO1_HUMAN General vesicular transport factor p115 OS=Homo sapiens GN=USO1 PE=1 SV=2

 Score = 46.6 bits (109), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/55 (43%), Positives = 34/55 (61%)

Query: 2   EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIY 56
           E F++KL  +S+HE+YSRA++KPQ +       + D+EF KL K LE      IY
Sbjct: 575 ENFIEKLGFISKHELYSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIY 629

General vesicular transport factor required for intercisternal transport in the Golgi stack; it is required for transcytotic fusion and/or subsequent binding of the vesicles to the target membrane. May well act as a vesicular anchor by interacting with the target membrane and holding the vesicular and target membranes in proximity.

Homo sapiens (taxid: 9606)

>sp|P41542|USO1_RAT General vesicular transport factor p115 OS=Rattus norvegicus GN=Uso1 PE=1 SV=1

 Score = 45.8 bits (107), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/55 (41%), Positives = 34/55 (61%)

Query: 2   EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIY 56
           E +++KL  +S+HE+YSRA++KPQ +       + D+EF KL K LE      IY
Sbjct: 575 ENYIEKLGFISKHELYSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIY 629

General vesicular transport factor required for intercisternal transport in the Golgi stack; it is required for transcytotic fusion and/or subsequent binding of the vesicles to the target membrane. May well act as a vesicular anchor by interacting with the target membrane and holding the vesicular and target membranes in proximity.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	73
195046570	819	GH24351 [Drosophila grimshawi] gi|193893	0.657	0.058	0.666	2e-09
195565634	796	GD16864 [Drosophila simulans] gi|1942037	0.739	0.067	0.574	3e-09
195134358	834	GI11005 [Drosophila mojavensis] gi|19390	0.657	0.057	0.666	4e-09
195399253	839	GJ15604 [Drosophila virilis] gi|19415065	0.657	0.057	0.666	8e-09
194763266	830	GF21187 [Drosophila ananassae] gi|190618	0.739	0.065	0.574	1e-08
357629108	806	putative vesicle docking protein P115 [D	0.671	0.060	0.591	1e-08
195448479	837	GK10110 [Drosophila willistoni] gi|19416	0.657	0.057	0.645	1e-08
195170085	833	GL18338 [Drosophila persimilis] gi|19411	0.657	0.057	0.645	1e-08
125981051	833	GA12833 [Drosophila pseudoobscura pseudo	0.657	0.057	0.645	1e-08
91088529	791	PREDICTED: similar to vesicle docking pr	0.643	0.059	0.574	3e-08

>gi|195046570|ref|XP_001992182.1| GH24351 [Drosophila grimshawi] gi|193893023|gb|EDV91889.1| GH24351 [Drosophila grimshawi]

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/48 (66%), Positives = 37/48 (77%)

Query: 2   EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEA 49
           E F +KL EVSRHE YSRA K+PQ+  + A E LLDYE+CKLYK LEA
Sbjct: 581 ETFCNKLGEVSRHEAYSRACKQPQIRAKGASELLLDYEYCKLYKGLEA 628

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195565634|ref|XP_002106404.1| GD16864 [Drosophila simulans] gi|194203780|gb|EDX17356.1| GD16864 [Drosophila simulans]

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/54 (57%), Positives = 39/54 (72%)

Query: 2   EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWI 55
           E F  KL+EVSRHE YSRA K+ Q+  + A E LLD+E+CKLYK LEA  A+ +
Sbjct: 546 ESFCSKLAEVSRHEAYSRACKQAQIRAKSAGELLLDFEYCKLYKGLEALIANLV 599

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195134358|ref|XP_002011604.1| GI11005 [Drosophila mojavensis] gi|193906727|gb|EDW05594.1| GI11005 [Drosophila mojavensis]

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/48 (66%), Positives = 37/48 (77%)

Query: 2   EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEA 49
           E F +KLSEVSRHE YSRA K+ Q+  + A E LLDYE+CKLYK LEA
Sbjct: 586 ETFCNKLSEVSRHEAYSRACKQAQIRAKGASELLLDYEYCKLYKGLEA 633

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195399253|ref|XP_002058235.1| GJ15604 [Drosophila virilis] gi|194150659|gb|EDW66343.1| GJ15604 [Drosophila virilis]

 Score = 64.3 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/48 (66%), Positives = 37/48 (77%)

Query: 2   EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEA 49
           E F +KLSEVSRHE YSRA K+ Q+  + A E LLDYE+CKLYK LEA
Sbjct: 585 ETFCNKLSEVSRHEAYSRACKQVQIRAKGASELLLDYEYCKLYKGLEA 632

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194763266|ref|XP_001963754.1| GF21187 [Drosophila ananassae] gi|190618679|gb|EDV34203.1| GF21187 [Drosophila ananassae]

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/54 (57%), Positives = 38/54 (70%)

Query: 2   EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWI 55
           E F  KL+EVSRHE YSRA K+ Q+  + A E LLD+E+CKLYK LEA  A  +
Sbjct: 581 ESFCSKLAEVSRHEAYSRACKQAQIRAKSAGELLLDFEYCKLYKGLEALIAKLV 634

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357629108|gb|EHJ78087.1| putative vesicle docking protein P115 [Danaus plexippus]

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/49 (59%), Positives = 38/49 (77%)

Query: 1   MEMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEA 49
           ME F+ KLS+VS+HE+Y+RAAK PQL      + L+DYEFCKL+K+LE 
Sbjct: 578 METFVAKLSDVSKHELYNRAAKHPQLRVASPSDVLIDYEFCKLFKSLEG 626

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195448479|ref|XP_002071676.1| GK10110 [Drosophila willistoni] gi|194167761|gb|EDW82662.1| GK10110 [Drosophila willistoni]

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/48 (64%), Positives = 37/48 (77%)

Query: 2   EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEA 49
           E F +KL+EVSRHE YSRA K+ Q+  + A E LLDYE+CKLYK LEA
Sbjct: 581 ETFCNKLAEVSRHEAYSRACKQAQIRAKSAGELLLDYEYCKLYKGLEA 628

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195170085|ref|XP_002025844.1| GL18338 [Drosophila persimilis] gi|194110697|gb|EDW32740.1| GL18338 [Drosophila persimilis]

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/48 (64%), Positives = 36/48 (75%)

Query: 2   EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEA 49
           E F +KL EVSRHE YSRA K+ Q+  + A E LLDYE+CKLYK LEA
Sbjct: 581 ETFCNKLGEVSRHEAYSRACKQAQIRAKSAGELLLDYEYCKLYKGLEA 628

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|125981051|ref|XP_001354532.1| GA12833 [Drosophila pseudoobscura pseudoobscura] gi|54642841|gb|EAL31585.1| GA12833 [Drosophila pseudoobscura pseudoobscura]

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/48 (64%), Positives = 36/48 (75%)

Query: 2   EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEA 49
           E F +KL EVSRHE YSRA K+ Q+  + A E LLDYE+CKLYK LEA
Sbjct: 581 ETFCNKLGEVSRHEAYSRACKQAQIRAKSAGELLLDYEYCKLYKGLEA 628

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91088529|ref|XP_972184.1| PREDICTED: similar to vesicle docking protein P115 [Tribolium castaneum] gi|270012234|gb|EFA08682.1| hypothetical protein TcasGA2_TC006352 [Tribolium castaneum]

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/47 (57%), Positives = 38/47 (80%)

Query: 2   EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALE 48
           E +  KL E+SRHEVY++AAK+PQ+  + + E LL++EFCKL+KALE
Sbjct: 579 ETYCTKLGEISRHEVYAKAAKQPQIRAKHSSELLLEFEFCKLFKALE 625

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	73
FB|FBgn0040087	837	p115 "p115" [Drosophila melano	0.657	0.057	0.625	1.4e-09
UNIPROTKB|F1NJ69	927	USO1 "Uncharacterized protein"	0.904	0.071	0.409	4.2e-06
ZFIN|ZDB-GENE-040426-688	956	uso1 "USO1 homolog, vesicle do	0.904	0.069	0.422	4.3e-06
UNIPROTKB|H0Y7C0	638	USO1 "General vesicular transp	0.904	0.103	0.393	6.9e-06
UNIPROTKB|F5GZ76	797	USO1 "General vesicular transp	0.904	0.082	0.393	9.2e-06
UNIPROTKB|F5H4X1	947	USO1 "General vesicular transp	0.904	0.069	0.393	1.1e-05
MGI|MGI:1929095	959	Uso1 "USO1 vesicle docking fac	0.904	0.068	0.393	1.2e-05
UNIPROTKB|P41541	961	USO1 "General vesicular transp	0.904	0.068	0.393	1.2e-05
UNIPROTKB|O60763	962	USO1 "General vesicular transp	0.904	0.068	0.393	1.2e-05
UNIPROTKB|E2R8C6	963	USO1 "Uncharacterized protein"	0.904	0.068	0.393	1.2e-05

FB|FBgn0040087 p115 "p115" [Drosophila melanogaster (taxid:7227)]

 Score = 151 (58.2 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 30/48 (62%), Positives = 36/48 (75%)

Query:     2 EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEA 49
             E F  KL+EVSRHE YSRA K+ Q+  + A E LLD+E+CKLYK LEA
Sbjct:   581 ESFCSKLAEVSRHEAYSRACKQAQIRAKSAGELLLDFEYCKLYKGLEA 628

GO:0006904 "vesicle docking involved in exocytosis" evidence=ISS

GO:0005795 "Golgi stack" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0007030 "Golgi organization" evidence=IMP

GO:0008565 "protein transporter activity" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0048280 "vesicle fusion with Golgi apparatus" evidence=IEA

UNIPROTKB|F1NJ69 USO1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 119 (46.9 bits), Expect = 4.2e-06, P = 4.2e-06
 Identities = 27/66 (40%), Positives = 38/66 (57%)

Query:     2 EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIYAKAKL 61
             E F++KL  +S+HE+YSRAA+KPQ         + D+EF KL K LE   +  IY  ++ 
Sbjct:   576 ENFVEKLGFISKHELYSRAAQKPQPGFSSPEHMMFDHEFTKLVKELEGVISKAIYKSSEE 635

Query:    62 PKSAIE 67
              K   E
Sbjct:   636 DKKEEE 641

GO:0000139 "Golgi membrane" evidence=IEA

GO:0048280 "vesicle fusion with Golgi apparatus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

ZFIN|ZDB-GENE-040426-688 uso1 "USO1 homolog, vesicle docking protein (yeast)" [Danio rerio (taxid:7955)]

 Score = 119 (46.9 bits), Expect = 4.3e-06, P = 4.3e-06
 Identities = 30/71 (42%), Positives = 42/71 (59%)

Query:     2 EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIYAKAKL 61
             E F++KL+ +++HE+YSRAA+KPQ         L D+EF KL K LE      +  KA L
Sbjct:   584 ENFVEKLAFITKHELYSRAAQKPQPAFSTPEHMLFDHEFTKLVKELEG-----MITKAVL 638

Query:    62 PKSAIEHQEKE 72
               S  E +E+E
Sbjct:   639 RSSEEEKKEEE 649

GO:0048193 "Golgi vesicle transport" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA

GO:0048280 "vesicle fusion with Golgi apparatus" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

UNIPROTKB|H0Y7C0 USO1 "General vesicular transport factor p115" [Homo sapiens (taxid:9606)]

 Score = 115 (45.5 bits), Expect = 6.9e-06, P = 6.9e-06
 Identities = 26/66 (39%), Positives = 38/66 (57%)

Query:     2 EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIYAKAKL 61
             E F++KL  +S+HE+YSRA++KPQ +       + D+EF KL K LE      IY  ++ 
Sbjct:   251 ENFIEKLGFISKHELYSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIYKSSEE 310

Query:    62 PKSAIE 67
              K   E
Sbjct:   311 DKKEEE 316

GO:0000139 "Golgi membrane" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA

GO:0048280 "vesicle fusion with Golgi apparatus" evidence=IEA

UNIPROTKB|F5GZ76 USO1 "General vesicular transport factor p115" [Homo sapiens (taxid:9606)]

 Score = 115 (45.5 bits), Expect = 9.2e-06, P = 9.2e-06
 Identities = 26/66 (39%), Positives = 38/66 (57%)

Query:     2 EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIYAKAKL 61
             E F++KL  +S+HE+YSRA++KPQ +       + D+EF KL K LE      IY  ++ 
Sbjct:   410 ENFIEKLGFISKHELYSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIYKSSEE 469

Query:    62 PKSAIE 67
              K   E
Sbjct:   470 DKKEEE 475

GO:0000139 "Golgi membrane" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA

GO:0048280 "vesicle fusion with Golgi apparatus" evidence=IEA

UNIPROTKB|F5H4X1 USO1 "General vesicular transport factor p115" [Homo sapiens (taxid:9606)]

 Score = 115 (45.5 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 26/66 (39%), Positives = 38/66 (57%)

Query:     2 EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIYAKAKL 61
             E F++KL  +S+HE+YSRA++KPQ +       + D+EF KL K LE      IY  ++ 
Sbjct:   560 ENFIEKLGFISKHELYSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIYKSSEE 619

Query:    62 PKSAIE 67
              K   E
Sbjct:   620 DKKEEE 625

GO:0000139 "Golgi membrane" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA

GO:0048280 "vesicle fusion with Golgi apparatus" evidence=IEA

MGI|MGI:1929095 Uso1 "USO1 vesicle docking factor" [Mus musculus (taxid:10090)]

 Score = 115 (45.5 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 26/66 (39%), Positives = 38/66 (57%)

Query:     2 EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIYAKAKL 61
             E F++KL  +S+HE+YSRA++KPQ +       + D+EF KL K LE      IY  ++ 
Sbjct:   575 ENFIEKLGFISKHELYSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIYKSSEE 634

Query:    62 PKSAIE 67
              K   E
Sbjct:   635 DKKEEE 640

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0006810 "transport" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IDA

GO:0006944 "cellular membrane fusion" evidence=ISO

GO:0008565 "protein transporter activity" evidence=IDA

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0045056 "transcytosis" evidence=ISO

GO:0048193 "Golgi vesicle transport" evidence=IEA

GO:0048280 "vesicle fusion with Golgi apparatus" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IDA

UNIPROTKB|P41541 USO1 "General vesicular transport factor p115" [Bos taurus (taxid:9913)]

 Score = 115 (45.5 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 26/66 (39%), Positives = 38/66 (57%)

Query:     2 EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIYAKAKL 61
             E F++KL  +S+HE+YSRA++KPQ +       + D+EF KL K LE      IY  ++ 
Sbjct:   575 ENFIEKLGFISKHELYSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIYKSSEE 634

Query:    62 PKSAIE 67
              K   E
Sbjct:   635 DKKEEE 640

GO:0048471 "perinuclear region of cytoplasm" evidence=ISS

GO:0008565 "protein transporter activity" evidence=ISS

GO:0006886 "intracellular protein transport" evidence=ISS

GO:0005829 "cytosol" evidence=ISS

GO:0000139 "Golgi membrane" evidence=IEA

GO:0048280 "vesicle fusion with Golgi apparatus" evidence=IEA

UNIPROTKB|O60763 USO1 "General vesicular transport factor p115" [Homo sapiens (taxid:9606)]

 Score = 115 (45.5 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 26/66 (39%), Positives = 38/66 (57%)

Query:     2 EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIYAKAKL 61
             E F++KL  +S+HE+YSRA++KPQ +       + D+EF KL K LE      IY  ++ 
Sbjct:   575 ENFIEKLGFISKHELYSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIYKSSEE 634

Query:    62 PKSAIE 67
              K   E
Sbjct:   635 DKKEEE 640

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA

GO:0048280 "vesicle fusion with Golgi apparatus" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

UNIPROTKB|E2R8C6 USO1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 115 (45.5 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 26/66 (39%), Positives = 38/66 (57%)

Query:     2 EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIYAKAKL 61
             E F++KL  +S+HE+YSRA++KPQ +       + D+EF KL K LE      IY  ++ 
Sbjct:   575 ENFIEKLGFISKHELYSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIYKSSEE 634

Query:    62 PKSAIE 67
              K   E
Sbjct:   635 DKKEEE 640

GO:0048280 "vesicle fusion with Golgi apparatus" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	73
pfam04869	308	pfam04869, Uso1_p115_head, Uso1 / p115 like vesicl	5e-09

>gnl|CDD|218299 pfam04869, Uso1_p115_head, Uso1 / p115 like vesicle tethering protein, head region

 Score = 50.0 bits (120), Expect = 5e-09
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 1   MEMFLDKLSEVSRHEVYSRAAKKPQLDP---ERAHEPLLDYEFCKLYKALEA 49
            + ++ KL ++  HE++       QL+P   E   +   D+EF +L+K    
Sbjct: 251 RDNYISKLKQLREHELFRDFELPQQLNPTSDETGPDVYFDFEFVELFKDNFY 302

Also known as General vesicular transport factor, Transcytosis associated protein (TAP) and Vesicle docking protein, this myosin-shaped molecule consists of an N-terminal globular head region, a coiled-coil tail which mediates dimerisation, and a short C-terminal acidic region. p115 tethers COP1 vesicles to the Golgi by binding the coiled coil proteins giantin (on the vesicles) and GM130 (on the Golgi), via its C-terminal acidic region. It is required for intercisternal transport in the golgi stack. This family consists of part of the head region. The head region is highly conserved, but its function is unknown. It does not seem to be essential for vesicle tethering. The N-terminal part of the head region, not within this family, contains context-detected Armadillo/beta-catenin-like repeats (pfam00514). Length = 308

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	73
KOG0946|consensus	970		99.63
PF04869	312	Uso1_p115_head: Uso1 / p115 like vesicle tethering	99.04

>KOG0946|consensus

Probab=99.63  E-value=4.5e-16  Score=132.27  Aligned_cols=62  Identities=39%  Similarity=0.565  Sum_probs=59.5

Q ss_pred             hhHHHHHHhHHHHHHHHHHhhCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhCCCCh
Q psy15443          2 EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIYAKAKLPK   63 (73)
Q Consensus         2 E~fvekL~~ISkhE~ysrAakkPQ~~~~~p~~ll~DheF~kLfK~LE~~i~k~v~~~s~~~~   63 (73)
                      |+|+++|+++||||+|+||+|+|||.++++..|+|||+||+|||++||.|+|++.++.+.-.
T Consensus       582 e~f~srL~~lsr~e~ysra~~kqq~~l~~~~k~~lD~~f~kL~kele~~i~k~ls~~~eee~  643 (970)
T KOG0946|consen  582 ENFISRLQRLSRHELYSRASMKQQPQLKSNTKLALDFEFKKLFKELEGLIAKLLSSKTEEEE  643 (970)
T ss_pred             HHHHHHHHHhhHhHHHHHHhhccCccCCCCchhhhhHHHHHHHHHHHHHHHHHhcCCCccch
Confidence            79999999999999999999999999999999999999999999999999999999887654

>PF04869 Uso1_p115_head: Uso1 / p115 like vesicle tethering protein, head region; InterPro: IPR006953 This domain identifies a group of proteins, which are described as: General vesicular transport factor, Transcytosis associated protein (TAP) or Vesicle docking protein, this myosin-shaped molecule consists of an N-terminal globular head region, a coiled-coil tail which mediates dimerisation, and a short C-terminal acidic region []

Probab=99.04  E-value=9.9e-11  Score=88.86  Aligned_cols=55  Identities=24%  Similarity=0.505  Sum_probs=44.8

Q ss_pred             ChhHHHHHHhHHHHHHHHHHhhCCCCCCCCCC----cchhHHHHHHHHHHHHHHHHHHH
Q psy15443          1 MEMFLDKLSEVSRHEVYSRAAKKPQLDPERAH----EPLLDYEFCKLYKALEAQSADWI   55 (73)
Q Consensus         1 ~E~fvekL~~ISkhE~ysrAakkPQ~~~~~p~----~ll~DheF~kLfK~LE~~i~k~v   55 (73)
                      +|+|++||.++.|+|.|+++.+.|++....++    +++||++||+|||.+|+.|.|+|
T Consensus       254 ~d~y~~kl~~lr~~~~f~~~~~~~~~~~~~~~~~lp~v~FD~~Fv~f~K~n~~rI~rai  312 (312)
T PF04869_consen  254 RDNYFSKLEQLRKSPLFRDAEKPPQLNPSSDDSGLPDVYFDWEFVEFFKDNYSRIQRAI  312 (312)
T ss_dssp             HHHHHHHHHCCCCSTTHHHHTT-SS---SSGG----G----HHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhcChhhhccccCCCCCCCCCCccceeeeccHHHHHHHHHhHHHHHHhC
Confidence            37999999999999999999999999999999    99999999999999999999975

p115 tethers COP1 vesicles to the Golgi by binding the coiled coil proteins giantin (on the vesicles) and GM130 (on the Golgi), via its C-terminal acidic region. It is required for intercisternal transport in the Golgi stack. This domain is found in the head region. The head region is highly conserved, but its function is unknown. It does not seem to be essential for vesicle tethering []. The N-terminal part of the head region contains context-detected Armadillo/beta-catenin-like repeats.; GO: 0006886 intracellular protein transport, 0048280 vesicle fusion with Golgi apparatus, 0000139 Golgi membrane, 0005737 cytoplasm; PDB: 2W3C_A 3GRL_A 3GQ2_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	73
2w3c_A	577	Globular Head Region Of The Human General Vesicular		4e-07
3gq2_A	651	Crystal Structure Of The Dimer Of The P115 Tether G		5e-07

>pdb|2W3C|A Chain A, Globular Head Region Of The Human General Vesicular Transport Factor P115 Length = 577

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 2   EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIY 56
           E F++KL  +S+HE+YSRA++KPQ +       + D+EF KL K LE      IY
Sbjct: 523 ENFIEKLGFISKHELYSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIY 577

>pdb|3GQ2|A Chain A, Crystal Structure Of The Dimer Of The P115 Tether Globular Head Domain Length = 651

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 2   EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIY 56
           E F++KL  +S+HE+YSRA++KPQ +       + D+EF KL K LE      IY
Sbjct: 575 ENFIEKLGFISKHELYSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIY 629
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	73
3grl_A	651	General vesicular transport factor P115; vesicle t	7e-11

>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A Length = 651

 Score = 54.7 bits (131), Expect = 7e-11
 Identities = 26/69 (37%), Positives = 40/69 (57%)

Query: 2   EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIYAKAKL 61
           E F++KL  +S+HE+YSRA++KPQ +       + D+EF KL K LE      IY  ++ 
Sbjct: 575 ENFIEKLGFISKHELYSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIYKSSEE 634

Query: 62  PKSAIEHQE 70
            K   E ++
Sbjct: 635 DKKEEEVKK 643

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	73
3grl_A	651	General vesicular transport factor P115; vesicle t	99.39

>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A

Probab=99.39  E-value=2.4e-13  Score=110.83  Aligned_cols=59  Identities=41%  Similarity=0.588  Sum_probs=56.6

Q ss_pred             hhHHHHHHhHHHHHHHHHHhhCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhCC
Q psy15443          2 EMFLDKLSEVSRHEVYSRAAKKPQLDPERAHEPLLDYEFCKLYKALEAQSADWIYAKAK   60 (73)
Q Consensus         2 E~fvekL~~ISkhE~ysrAakkPQ~~~~~p~~ll~DheF~kLfK~LE~~i~k~v~~~s~   60 (73)
                      |+|++||.++.+||.|++|+++||+...+|++|+|||+||+|||.+|+.|.|++..+.+
T Consensus       575 d~y~~kl~~lr~~~~f~~~~~~~~~~~~~~~~v~fd~~F~~~fK~~~~ri~~al~~~~~  633 (651)
T 3grl_A          575 ENFIEKLGFISKHELYSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIYKSSE  633 (651)
T ss_dssp             HHHHHHHHHHHHSTTHHHHHHCSCCCCSSGGGTTCCHHHHHHHHHHHHHHHHHHHCCC-
T ss_pred             HHHHHHHHHHhcCHHHHHHHhCcCccCCCCCceeecHHHHHHHHHHHHHHHHHhcCCcc
Confidence            79999999999999999999999999999999999999999999999999999998754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00