Psyllid ID: psy15503

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------
Protein Sequence
MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIKYCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHcccccHHHHHHHHHHHccccccccccccccccEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHccHHHHHEEEEEEccccHHHHHHHHHHHHHHHHHccccccccccccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccEEEEEEccccccEEEEEEEccccEEEEEcc
Coil and Loop (DISEMBL)
MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEdikycwmndahsrwilTVPVCLSILVNLAILMNVLRVLLTKLhsnstnpapiGIRKAARAALILVPLfglhhillpfrpepkspweMVYDVFSAVLVSSQ
Flexible Loop (DISEMBL)
MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIKYCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ
Low Complexity Region (SEG)
MVANYFWMFCEGlhlhlalvvvfvKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIKYCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ
Disordered region (IsUnstruct)
**ANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIKYCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLV***
Disordered Region (DISOPRED)
MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIKYCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLL****************KAARAALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ
Disordered Region (DISEMBL)
MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIKYCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ
Disordered Region (DISPRO)
MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIKYCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ
Transmembrane Helix (TMHMM)
ooooHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIKYCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	157	2.2.26 [Sep-21-2011]
Q68EK2	470	Calcitonin gene-related p	yes	N/A	0.961	0.321	0.378	2e-23
O08893	478	Calcitonin receptor OS=Ca	yes	N/A	0.974	0.320	0.360	9e-23
Q8WN93	462	Calcitonin gene-related p	yes	N/A	0.974	0.331	0.417	2e-22
P47872	440	Secretin receptor OS=Homo	no	N/A	0.929	0.331	0.357	4e-22
P30988	490	Calcitonin receptor OS=Ho	yes	N/A	0.866	0.277	0.364	5e-22
Q16602	461	Calcitonin gene-related p	no	N/A	0.968	0.329	0.408	9e-22
P79222	474	Calcitonin receptor OS=Or	yes	N/A	0.866	0.286	0.371	2e-21
Q63118	464	Calcitonin gene-related p	yes	N/A	0.974	0.329	0.405	2e-21
A6QP74	462	Calcitonin gene-related p	no	N/A	0.968	0.329	0.421	4e-21
P25117	498	Calcitonin receptor OS=Su	no	N/A	0.847	0.267	0.401	4e-21

>sp|Q68EK2|CALRL_DANRE Calcitonin gene-related peptide type 1 receptor OS=Danio rerio GN=calcrla PE=2 SV=1

 Score =  108 bits (269), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 93/156 (59%), Gaps = 5/156 (3%)

Query: 3   ANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIKYC 62
            NYFWM CEG++LH  +VV    +   + W++ +GW  PLI  +++A  R     D   C
Sbjct: 233 CNYFWMLCEGIYLHTLIVVAVFAEKQHLMWYYLLGWGFPLIPATIHAVARSYYYND--NC 290

Query: 63  WMNDAHS-RWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALIL 121
           W++   S  +I+  P+C ++LVNL  L+N++RVL+TKL       + + + KA RA LIL
Sbjct: 291 WISSNTSLLYIIHGPICAAMLVNLFFLLNIVRVLITKLKVTHQAKSSLYM-KAVRATLIL 349

Query: 122 VPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ 157
           VPL G+ ++LLP++P  +   E +YD    +L+  Q
Sbjct: 350 VPLLGIQYVLLPYKPSGRVSAE-IYDYIMHILMHYQ 384

Receptor for calcitonin-gene-related peptide (CGRP) (By similarity). Receptor specificity may be modulated by accessory proteins. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.
Danio rerio (taxid: 7955)

>sp|O08893|CALCR_CAVPO Calcitonin receptor OS=Cavia porcellus GN=CALCR PE=2 SV=1

 Score =  105 bits (263), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 94/158 (59%), Gaps = 5/158 (3%)

Query: 1   MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
           M  NYFWM CEG++LH  +VV    +   +RW++ +GW  PL+ T+++A  R     D  
Sbjct: 230 MACNYFWMLCEGIYLHTLIVVSVFNEAKHLRWYYLLGWGFPLVPTTIHAITRALYFND-- 287

Query: 61  YCWMN-DAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAAL 119
            CW++ D H  +I+  PV ++++VN   L+N++RVL+TK+       + + + KA +A +
Sbjct: 288 NCWISVDTHLLYIIHGPVMVALVVNFFFLLNIVRVLVTKMRETHEAESYMYL-KAVKATM 346

Query: 120 ILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ 157
           ILVPL G+  ++ P+RP  K   + +YD F   L+  Q
Sbjct: 347 ILVPLLGIQFVVFPWRPSNKVLGK-IYDYFMHSLIHFQ 383

This is a receptor for calcitonin. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase. The calcitonin receptor is thought to couple to the heterotrimeric guanosine triphosphate-binding protein that is sensitive to cholera toxin.

Cavia porcellus (taxid: 10141)

>sp|Q8WN93|CALRL_PIG Calcitonin gene-related peptide type 1 receptor OS=Sus scrofa GN=CALCRL PE=1 SV=1

 Score =  104 bits (260), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 95/158 (60%), Gaps = 5/158 (3%)

Query: 1   MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
           M  NYFWM CEG++LH  +VV    +   + W++F+GW  PLI   ++A  R     D  
Sbjct: 224 MGCNYFWMLCEGIYLHTLIVVAVFAEKQHLMWYYFLGWGFPLIPACIHAVARRLYYND-- 281

Query: 61  YCWM-NDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAAL 119
            CW+ +D H  +I+  P+C ++LVNL  L+N++RVL+TKL       + + + KA RA L
Sbjct: 282 NCWISSDTHLLYIIHGPICAALLVNLFFLLNIVRVLITKLKVTHQAESNLYM-KAVRATL 340

Query: 120 ILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ 157
           ILVPL G+  +L+P+RPE K   E VYD    +LV  Q
Sbjct: 341 ILVPLLGIEFVLIPWRPEGKIA-EEVYDYIMHILVHYQ 377

Receptor for calcitonin-gene-related peptide (CGRP) together with RAMP1 and receptor for adrenomedullin together with RAMP2 or RAMP3. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.

Sus scrofa (taxid: 9823)

>sp|P47872|SCTR_HUMAN Secretin receptor OS=Homo sapiens GN=SCTR PE=2 SV=2

 Score =  103 bits (257), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 91/151 (60%), Gaps = 5/151 (3%)

Query: 1   MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
           ++ANY W+  EGL+LH  L + F  +   ++ F   GW  P I  +++A  RH  LED+ 
Sbjct: 226 IMANYSWLLVEGLYLHTLLAISFFSERKYLQGFVAFGWGSPAIFVALWAIARHF-LEDVG 284

Query: 61  YCWMNDAHSR--WILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIG-IRKAARA 117
            CW  +A++   WI+  PV LSIL+N  + +N+LR+L+ KL +  T    +   ++ AR+
Sbjct: 285 -CWDINANASIWWIIRGPVILSILINFILFINILRILMRKLRTQETRGNEVSHYKRLARS 343

Query: 118 ALILVPLFGLHHILLPFRPEPKSPWEMVYDV 148
            L+L+PLFG+H+I+  F PE     ++ +++
Sbjct: 344 TLLLIPLFGIHYIVFAFSPEDAMEIQLFFEL 374

This is a receptor for secretin. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.

Homo sapiens (taxid: 9606)

>sp|P30988|CALCR_HUMAN Calcitonin receptor OS=Homo sapiens GN=CALCR PE=1 SV=1

 Score =  103 bits (256), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 85/140 (60%), Gaps = 4/140 (2%)

Query: 1   MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
           M  NYFWM CEG++LH  +VV    +   +RW++ +GW  PL+ T+++A  R     D  
Sbjct: 246 MACNYFWMLCEGIYLHTLIVVAVFTEKQRLRWYYLLGWGFPLVPTTIHAITRAVYFND-- 303

Query: 61  YCWMN-DAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAAL 119
            CW++ + H  +I+  PV  +++VN   L+N++RVL+TK+       + + + KA +A +
Sbjct: 304 NCWLSVETHLLYIIHGPVMAALVVNFFFLLNIVRVLVTKMRETHEAESHMYL-KAVKATM 362

Query: 120 ILVPLFGLHHILLPFRPEPK 139
           ILVPL G+  ++ P+RP  K
Sbjct: 363 ILVPLLGIQFVVFPWRPSNK 382

This is a receptor for calcitonin. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase. The calcitonin receptor is thought to couple to the heterotrimeric guanosine triphosphate-binding protein that is sensitive to cholera toxin.

Homo sapiens (taxid: 9606)

>sp|Q16602|CALRL_HUMAN Calcitonin gene-related peptide type 1 receptor OS=Homo sapiens GN=CALCRL PE=1 SV=2

 Score =  102 bits (254), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 97/164 (59%), Gaps = 12/164 (7%)

Query: 1   MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
           M  NYFWM CEG++LH  +VV    +   + W++F+GW  PLI   ++A  R     D  
Sbjct: 223 MGCNYFWMLCEGIYLHTLIVVAVFAEKQHLMWYYFLGWGFPLIPACIHAIARSLYYND-- 280

Query: 61  YCWM-NDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAAL 119
            CW+ +D H  +I+  P+C ++LVNL  L+N++RVL+TKL       + + + KA RA L
Sbjct: 281 NCWISSDTHLLYIIHGPICAALLVNLFFLLNIVRVLITKLKVTHQAESNLYM-KAVRATL 339

Query: 120 ILVPLFGLHHILLPFRPEPKSPWEMVYDV-------FSAVLVSS 156
           ILVPL G+  +L+P+RPE K   E VYD        F  +LVS+
Sbjct: 340 ILVPLLGIEFVLIPWRPEGKIA-EEVYDYIMHILMHFQGLLVST 382

Receptor for calcitonin-gene-related peptide (CGRP) together with RAMP1 and receptor for adrenomedullin together with RAMP3 (By similarity). Receptor for adrenomedullin together with RAMP2. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.

Homo sapiens (taxid: 9606)

>sp|P79222|CALCR_RABIT Calcitonin receptor OS=Oryctolagus cuniculus GN=CALCR PE=2 SV=1

 Score =  101 bits (252), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 84/140 (60%), Gaps = 4/140 (2%)

Query: 1   MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
           M  NYFWM CEG++LH  +VV        +RW++ +GW  PL+ T+++A  R     D  
Sbjct: 230 MSCNYFWMLCEGIYLHTLIVVAVFAKQQHLRWYYLLGWGFPLVPTTIHAITRAIYFND-- 287

Query: 61  YCWMN-DAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAAL 119
            CWM+ + H  +I+  PV  +++VN   L+N++RVL+TK+       + + + KA +A +
Sbjct: 288 NCWMSVETHLLYIIHGPVMAALVVNFFFLLNIVRVLVTKMRETLEAESHMYL-KAVKATM 346

Query: 120 ILVPLFGLHHILLPFRPEPK 139
           ILVPL G+  ++ P+RP  K
Sbjct: 347 ILVPLLGIQFVVFPWRPSNK 366

This is a receptor for calcitonin. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase. The calcitonin receptor is thought to couple to the heterotrimeric guanosine triphosphate-binding protein that is sensitive to cholera toxin. Isoform 2 has altered ligand binding and abolished coupling to phospholipase C.

Oryctolagus cuniculus (taxid: 9986)

>sp|Q63118|CALRL_RAT Calcitonin gene-related peptide type 1 receptor OS=Rattus norvegicus GN=Calcrl PE=2 SV=1

 Score =  101 bits (251), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 94/158 (59%), Gaps = 5/158 (3%)

Query: 1   MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
           M  NYFWM CEG++LH  +VV    +   + W++F+GW  PL+   ++A  R     D  
Sbjct: 223 MGCNYFWMLCEGIYLHTLIVVAVFAEKQHLMWYYFLGWGFPLLPACIHAIARSLYYND-- 280

Query: 61  YCWM-NDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAAL 119
            CW+ +D H  +I+  P+C ++LVNL  L+N++RVL+TKL       + + + KA RA L
Sbjct: 281 NCWISSDTHLLYIIHGPICAALLVNLFFLLNIVRVLITKLKVTHQAESNLYM-KAVRATL 339

Query: 120 ILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ 157
           ILVPL G+  +L P+RPE K   E VYD    +L+  Q
Sbjct: 340 ILVPLLGIEFVLFPWRPEGKVA-EEVYDYVMHILMHYQ 376

Receptor for calcitonin-gene-related peptide (CGRP) together with RAMP1 and receptor for adrenomedullin together with RAMP2 or RAMP3 (By similarity). The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.

Rattus norvegicus (taxid: 10116)

>sp|A6QP74|CALRL_BOVIN Calcitonin gene-related peptide type 1 receptor OS=Bos taurus GN=CALCRL PE=2 SV=2

 Score =  100 bits (249), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 97/159 (61%), Gaps = 7/159 (4%)

Query: 1   MVANYFWMFCEGLHLH-LALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDI 59
           M  NYFWM CEG++LH L +V VF +   LM W++F+GW  PLI   ++A  R     D 
Sbjct: 224 MGCNYFWMLCEGIYLHTLVVVAVFAEKQHLM-WYYFLGWGFPLIPACIHAVARRLYYND- 281

Query: 60  KYCWM-NDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAA 118
             CW+ +D    +I+  P+C ++LVNL  L+N++RVL+TKL       + + + KA RA 
Sbjct: 282 -NCWISSDTQLLYIIHGPICAALLVNLFFLLNIVRVLITKLKVTHQAESNLYM-KAVRAT 339

Query: 119 LILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ 157
           LILVPL G+  +L+P+RPE K   E +YD    +L+  Q
Sbjct: 340 LILVPLLGIEFVLIPWRPEGKIA-EEIYDYIINILMHYQ 377

Receptor for calcitonin-gene-related peptide (CGRP) together with RAMP1 and receptor for adrenomedullin together with RAMP2 or RAMP3 (By similarity). The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.

Bos taurus (taxid: 9913)

>sp|P25117|CALCR_PIG Calcitonin receptor OS=Sus scrofa GN=CALCR PE=2 SV=2

 Score =  100 bits (248), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 83/137 (60%), Gaps = 4/137 (2%)

Query: 1   MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
           M  NYFWM CEG++LH  +VV    +   + W+H +GW  PLI T+ +A  R     D  
Sbjct: 247 MSCNYFWMLCEGVYLHTLIVVSVFAEGQRLWWYHVLGWGFPLIPTTAHAITRAVLFND-- 304

Query: 61  YCWMN-DAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAAL 119
            CW++ D +  +I+  PV  +++VN   L+N+LRVL+ KL  +    + + + KA RA L
Sbjct: 305 NCWLSVDTNLLYIIHGPVMAALVVNFFFLLNILRVLVKKLKESQEAESHMYL-KAVRATL 363

Query: 120 ILVPLFGLHHILLPFRP 136
           ILVPL G+  ++LP+RP
Sbjct: 364 ILVPLLGVQFVVLPWRP 380

This is a receptor for calcitonin. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase. The calcitonin receptor is thought to couple to the heterotrimeric guanosine triphosphate-binding protein that is sensitive to cholera toxin. The receptor can also couple to an additional signaling pathway via a pertussis toxin-sensitive g protein in isolated osteoclasts and in LLC-PK1 cells.

Sus scrofa (taxid: 9823)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	157
328715791	221	PREDICTED: calcitonin receptor-like [Acy	0.993	0.705	0.662	7e-54
270008144	405	hypothetical protein TcasGA2_TC013321 [T	0.910	0.353	0.631	4e-46
189237604	416	PREDICTED: similar to CG4395 CG4395-PA [	0.910	0.343	0.574	4e-42
195133064	490	GI16272 [Drosophila mojavensis] gi|19390	1.0	0.320	0.560	6e-40
357612140	410	neuropeptide receptor B4 [Danaus plexipp	1.0	0.382	0.541	2e-39
195045908	490	GH24552 [Drosophila grimshawi] gi|193892	1.0	0.320	0.566	2e-39
198467581	496	GA18155 [Drosophila pseudoobscura pseudo	1.0	0.316	0.560	4e-39
195478089	484	GE16188 [Drosophila yakuba] gi|194187928	1.0	0.324	0.566	2e-38
194895733	486	GG19529 [Drosophila erecta] gi|190649977	1.0	0.323	0.560	2e-38
195352740	486	GM11523 [Drosophila sechellia] gi|194126	1.0	0.323	0.566	2e-38

>gi|328715791|ref|XP_001945334.2| PREDICTED: calcitonin receptor-like [Acyrthosiphon pisum]

 Score =  214 bits (546), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 104/157 (66%), Positives = 126/157 (80%), Gaps = 1/157 (0%)

Query: 1   MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
           MVANY WMFCEGLHLH+ALVVVFV D + MRWF+ IGW VP+ +T +Y   R  S ED  
Sbjct: 14  MVANYMWMFCEGLHLHMALVVVFVNDVNAMRWFYAIGWGVPVALTVLYVSWRSNS-EDTA 72

Query: 61  YCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALI 120
            CWM+++H +W+LTVPV  SIL +L  LMNV+RVLLTKLH NSTNPAPIG+RKA RAALI
Sbjct: 73  QCWMHESHCQWVLTVPVFASILTSLMFLMNVMRVLLTKLHRNSTNPAPIGVRKAVRAALI 132

Query: 121 LVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ 157
           LVPLFG+H+IL+P+RP+ K+  E VY +FS VLVS+Q
Sbjct: 133 LVPLFGIHYILIPYRPKHKTTVETVYQIFSVVLVSTQ 169

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270008144|gb|EFA04592.1| hypothetical protein TcasGA2_TC013321 [Tribolium castaneum]

 Score =  189 bits (479), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 91/144 (63%), Positives = 113/144 (78%), Gaps = 1/144 (0%)

Query: 1   MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
           M+ANY WMFCEGLHLHLALVVVFV+D   M+WF  +GW  P II  +Y+ VR   L+D  
Sbjct: 174 MLANYMWMFCEGLHLHLALVVVFVRDAETMKWFFALGWGAPFIIVLIYSVVRIFILKDNY 233

Query: 61  YCWMNDAH-SRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAAL 119
            CWM D++ S WILT PVC+S+LV+L  L+NVLRV+LT +H NS NPAP+G+R+AARAAL
Sbjct: 234 MCWMADSYYSSWILTAPVCISLLVSLIFLINVLRVILTIMHPNSANPAPMGLRRAARAAL 293

Query: 120 ILVPLFGLHHILLPFRPEPKSPWE 143
           IL+PLFGL HIL+PFRP+   P+E
Sbjct: 294 ILIPLFGLQHILIPFRPDMYDPYE 317

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189237604|ref|XP_001808596.1| PREDICTED: similar to CG4395 CG4395-PA [Tribolium castaneum]

 Score =  175 bits (444), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 89/155 (57%), Positives = 112/155 (72%), Gaps = 12/155 (7%)

Query: 1   MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYA---YVRH---- 53
           M+ANY WMFCEGLHLHLALVVVFV+D   M+WF  +GW  P II  +Y+    + H    
Sbjct: 174 MLANYMWMFCEGLHLHLALVVVFVRDAETMKWFFALGWGAPFIIVLIYSVETTINHGLVM 233

Query: 54  ----TSLEDIKYCWMNDAH-SRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAP 108
               + L     CWM D++ S WILT PVC+S+LV+L  L+NVLRV+LT +H NS NPAP
Sbjct: 234 ARINSHLNLFFRCWMADSYYSSWILTAPVCISLLVSLIFLINVLRVILTIMHPNSANPAP 293

Query: 109 IGIRKAARAALILVPLFGLHHILLPFRPEPKSPWE 143
           +G+R+AARAALIL+PLFGL HIL+PFRP+   P+E
Sbjct: 294 MGLRRAARAALILIPLFGLQHILIPFRPDMYDPYE 328

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195133064|ref|XP_002010959.1| GI16272 [Drosophila mojavensis] gi|193906934|gb|EDW05801.1| GI16272 [Drosophila mojavensis]

 Score =  168 bits (426), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 88/157 (56%), Positives = 111/157 (70%)

Query: 1   MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
           M+ NYFWMFCEGLHLHL LVVVFVKDT +MRWF  + W+ PL+    Y   RH S+ D +
Sbjct: 280 MLVNYFWMFCEGLHLHLVLVVVFVKDTIVMRWFKLLSWLSPLVFVLPYGVARHLSVNDNE 339

Query: 61  YCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALI 120
           +CW+ND+   WI +VP+ LS+L +   L+NVLRV++ KLH  S  PAP+ IRKA RA +I
Sbjct: 340 HCWINDSLYLWIFSVPITLSLLASFIFLINVLRVIVRKLHPQSAQPAPLAIRKAVRATII 399

Query: 121 LVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ 157
           LVPLFGL H LLP+RPE  +  +  Y + S VLVS Q
Sbjct: 400 LVPLFGLQHFLLPYRPEAGTQLDRFYQLLSVVLVSLQ 436

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357612140|gb|EHJ67831.1| neuropeptide receptor B4 [Danaus plexippus]

 Score =  167 bits (422), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 85/157 (54%), Positives = 108/157 (68%)

Query: 1   MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
           MV  Y WMFCEGLHLH+ALVVVFVK+   MR F  IGW + L+I  VYA VR+      +
Sbjct: 207 MVTGYTWMFCEGLHLHIALVVVFVKEKVAMRCFLAIGWGLSLVIIIVYAVVRYHIPGATE 266

Query: 61  YCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALI 120
            CWM  + + WI+TVPV +S++ +   L+NV+RVLLTKLH      + +  +KAARAALI
Sbjct: 267 RCWMEQSEAFWIITVPVVISLIASFVFLINVVRVLLTKLHPAPHRYSSVATKKAARAALI 326

Query: 121 LVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ 157
           L+PLFGLH +L+PFRP P  P E +Y V SA+L S Q
Sbjct: 327 LIPLFGLHFVLIPFRPSPDMPGEKLYQVVSALLTSLQ 363

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195045908|ref|XP_001992054.1| GH24552 [Drosophila grimshawi] gi|193892895|gb|EDV91761.1| GH24552 [Drosophila grimshawi]

 Score =  167 bits (422), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 89/157 (56%), Positives = 113/157 (71%)

Query: 1   MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
           M+ NYFWMFCEGLHLHL LVVVFVKDT ++RWF F  W+ PL+    Y  VRH S  D K
Sbjct: 280 MLVNYFWMFCEGLHLHLVLVVVFVKDTIVLRWFKFFSWLSPLLFIIPYGVVRHFSANDNK 339

Query: 61  YCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALI 120
           +CW++++   WIL+VP+ LS+L +   L+NVLRV++ KLH  S +PAP+ IRKA RA +I
Sbjct: 340 HCWISESFYLWILSVPITLSLLASFIFLINVLRVIVRKLHPQSAHPAPMAIRKAVRATII 399

Query: 121 LVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ 157
           LVPLFGL H LLP+RPE  +  +  Y + S VLVS Q
Sbjct: 400 LVPLFGLQHFLLPYRPEAGTKLDRFYQLMSVVLVSLQ 436

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198467581|ref|XP_001354436.2| GA18155 [Drosophila pseudoobscura pseudoobscura] gi|198149313|gb|EAL31489.2| GA18155 [Drosophila pseudoobscura pseudoobscura]

 Score =  165 bits (418), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 88/157 (56%), Positives = 110/157 (70%)

Query: 1   MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
           M+ NYFWMFCEGLHLHL LVVVFVKDT +MRWF  I W+ P+ +  VY   RH S  D +
Sbjct: 286 MLVNYFWMFCEGLHLHLVLVVVFVKDTIVMRWFKIISWLSPIHVALVYGAARHYSSTDNE 345

Query: 61  YCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALI 120
            CW+ND+   WI +VP+ LS+L +   L+NVLRV++ KLH  S  PAP+ IRKA RA +I
Sbjct: 346 NCWINDSLFLWIFSVPITLSLLASFIFLINVLRVIVRKLHPQSAQPAPLAIRKAVRATII 405

Query: 121 LVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ 157
           LVPLFGL H LLP+RP+  +  +  Y + S VLVS Q
Sbjct: 406 LVPLFGLQHFLLPYRPDAGTQLDRFYQLLSVVLVSLQ 442

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195478089|ref|XP_002100404.1| GE16188 [Drosophila yakuba] gi|194187928|gb|EDX01512.1| GE16188 [Drosophila yakuba]

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 89/157 (56%), Positives = 110/157 (70%)

Query: 1   MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
           M+ NYFWMFCEGLHLHL LVVVFVKDT +MRWF  I W +P+ I  VY   RH S  D K
Sbjct: 274 MLVNYFWMFCEGLHLHLVLVVVFVKDTIVMRWFIVISWFLPIPIAIVYGLARHFSSPDNK 333

Query: 61  YCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALI 120
           +CW+ D+   WI +VP+ LS+L +   L+NVLRV++ KLH  S  PAP+ IRKA RA +I
Sbjct: 334 HCWITDSLYLWIFSVPITLSLLASFIFLINVLRVIVRKLHPQSAQPAPLAIRKAVRATII 393

Query: 121 LVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ 157
           LVPLFGL H LLP+RP+  +  +  Y + S VLVS Q
Sbjct: 394 LVPLFGLQHFLLPYRPDAGTQLDHFYQMLSVVLVSLQ 430

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194895733|ref|XP_001978328.1| GG19529 [Drosophila erecta] gi|190649977|gb|EDV47255.1| GG19529 [Drosophila erecta]

 Score =  163 bits (413), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/157 (56%), Positives = 110/157 (70%)

Query: 1   MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
           M+ NYFWMFCEGLHLHL LVVVFVKD  +MRWF  I W +P+ IT +Y   RH S  D K
Sbjct: 276 MLVNYFWMFCEGLHLHLVLVVVFVKDAIVMRWFILISWFLPIHITILYGLARHFSTPDNK 335

Query: 61  YCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALI 120
           +CW+ D+   WI +VP+ LS+L +   L+NVLRV++ KLH  S  PAP+ IRKA RA +I
Sbjct: 336 HCWITDSLYLWIFSVPITLSLLASFIFLINVLRVIVRKLHPQSAQPAPLAIRKAVRATII 395

Query: 121 LVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ 157
           LVPLFGL H LLP+RP+  +  +  Y + S VLVS Q
Sbjct: 396 LVPLFGLQHFLLPYRPDAGTQLDHFYQMLSVVLVSLQ 432

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195352740|ref|XP_002042869.1| GM11523 [Drosophila sechellia] gi|194126916|gb|EDW48959.1| GM11523 [Drosophila sechellia]

 Score =  163 bits (413), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 89/157 (56%), Positives = 109/157 (69%)

Query: 1   MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
           M+ NYFWMFCEGLHLHL LVVVFVKDT +MRWF  I W  P+ I  VY   RH S  D K
Sbjct: 276 MLVNYFWMFCEGLHLHLVLVVVFVKDTIVMRWFIVISWFSPIPIAIVYGLARHFSSPDNK 335

Query: 61  YCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALI 120
           +CW+ D+   WI +VP+ LS+L +   L+NVLRV++ KLH  S  PAP+ IRKA RA +I
Sbjct: 336 HCWITDSLYLWIFSVPITLSLLASFIFLINVLRVIVRKLHPQSAQPAPLAIRKAVRATII 395

Query: 121 LVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ 157
           LVPLFGL H LLP+RP+  +  +  Y + S VLVS Q
Sbjct: 396 LVPLFGLQHFLLPYRPDAGTQLDHFYQMLSVVLVSLQ 432

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	157
FB|FBgn0030437	486	hec "hector" [Drosophila melan	1.0	0.323	0.496	1.6e-38
FB|FBgn0052843	443	Dh31-R1 "Diuretic hormone 31 r	1.0	0.354	0.398	3.4e-29
UNIPROTKB|Q8WN93	462	CALCRL "Calcitonin gene-relate	0.968	0.329	0.402	9.8e-26
UNIPROTKB|Q16602	461	CALCRL "Calcitonin gene-relate	0.968	0.329	0.396	2.8e-25
UNIPROTKB|F1PI78	462	CALCRL "Uncharacterized protei	0.968	0.329	0.383	6.2e-25
UNIPROTKB|C5HV42	457	CALCRL "Calcitonin receptor-li	0.968	0.332	0.389	9.8e-25
RGD|2255	464	Calcrl "calcitonin receptor-li	0.968	0.327	0.389	1.1e-24
UNIPROTKB|A6QP74	462	CALCRL "Calcitonin gene-relate	0.968	0.329	0.383	3e-24
UNIPROTKB|G3X6P6	462	CALCRL "Calcitonin gene-relate	0.968	0.329	0.383	3e-24
UNIPROTKB|G3N3V9	463	CALCRL "Calcitonin gene-relate	0.968	0.328	0.383	3e-24

FB|FBgn0030437 hec "hector" [Drosophila melanogaster (taxid:7227)]

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 78/157 (49%), Positives = 98/157 (62%)

Query:     1 MVANYFWMFCEGXXXXXXXXXXXXKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
             M+ NYFWMFCEG            KDT +MRWF  I W  P+ I  VY   RH S  D K
Sbjct:   276 MLVNYFWMFCEGLHLHLVLVVVFVKDTIVMRWFIVISWFSPIPIAIVYGLARHFSSPDNK 335

Query:    61 YCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALI 120
             +CW+ D+   WI +VP+ LS+L +   L+NVLRV++ KLH  S  PAP+ IRKA RA +I
Sbjct:   336 HCWITDSLYLWIFSVPITLSLLASFIFLINVLRVIVRKLHPQSAQPAPLAIRKAVRATII 395

Query:   121 LVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ 157
             LVPLFGL H LLP+RP+  +  +  Y + S VLVS Q
Sbjct:   396 LVPLFGLQHFLLPYRPDAGTQLDHFYQMLSVVLVSLQ 432

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0004948 "calcitonin receptor activity" evidence=IEA;ISS

GO:0008188 "neuropeptide receptor activity" evidence=ISS

GO:0008049 "male courtship behavior" evidence=IMP

FB|FBgn0052843 Dh31-R1 "Diuretic hormone 31 receptor 1" [Drosophila melanogaster (taxid:7227)]

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 65/163 (39%), Positives = 94/163 (57%)

Query:     1 MVANYFWMFCEGXXXXXXXXXXXXKDTSLMRWFHFIGWVVPLIITSVYAYVRHT--SLED 58
             +++NY WM CEG             +  L++W    GW  P I+  VY+  R    + ED
Sbjct:   224 LLSNYSWMLCEGFYLHTVLVAAFISEKRLVKWLIAFGWGSPAIVIFVYSMARGLGGTPED 283

Query:    59 IKYCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIG----IRKA 114
              ++CWMN  + + IL VPVC+S+ +NL  L N++RV+L KL++ ++     G    + +A
Sbjct:   284 NRHCWMNQTNYQNILMVPVCISMFLNLLFLCNIVRVVLLKLNAPASIQGSCGPSRTVLQA 343

Query:   115 ARAALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ 157
              RA L+LVPL GL +IL PFRP PK PWE  Y++ SA   S Q
Sbjct:   344 FRATLLLVPLLGLQYILTPFRPAPKHPWENTYEIISAFTASFQ 386

GO:0004948 "calcitonin receptor activity" evidence=ISS

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0008188 "neuropeptide receptor activity" evidence=ISS

GO:0008036 "diuretic hormone receptor activity" evidence=IDA

UNIPROTKB|Q8WN93 CALCRL "Calcitonin gene-related peptide type 1 receptor" [Sus scrofa (taxid:9823)]

 Score = 294 (108.6 bits), Expect = 9.8e-26, P = 9.8e-26
 Identities = 64/159 (40%), Positives = 89/159 (55%)

Query:     1 MVANYFWMFCEGXXXXXXXXXXXXKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
             M  NYFWM CEG             +   + W++F+GW  PLI   ++A  R     D  
Sbjct:   224 MGCNYFWMLCEGIYLHTLIVVAVFAEKQHLMWYYFLGWGFPLIPACIHAVARRLYYND-- 281

Query:    61 YCWMN-DAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGI-RKAARAA 118
              CW++ D H  +I+  P+C ++LVNL  L+N++RVL+TKL    T+ A   +  KA RA 
Sbjct:   282 NCWISSDTHLLYIIHGPICAALLVNLFFLLNIVRVLITKL--KVTHQAESNLYMKAVRAT 339

Query:   119 LILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ 157
             LILVPL G+  +L+P+RPE K   E VYD    +LV  Q
Sbjct:   340 LILVPLLGIEFVLIPWRPEGKIA-EEVYDYIMHILVHYQ 377

GO:0005886 "plasma membrane" evidence=IEA

GO:0071329 "cellular response to sucrose stimulus" evidence=IEA

GO:0048661 "positive regulation of smooth muscle cell proliferation" evidence=IEA

GO:0031623 "receptor internalization" evidence=IEA

GO:0030819 "positive regulation of cAMP biosynthetic process" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA

GO:0007507 "heart development" evidence=IEA

GO:0007189 "adenylate cyclase-activating G-protein coupled receptor signaling pathway" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IEA

GO:0006171 "cAMP biosynthetic process" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005768 "endosome" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

GO:0001635 "calcitonin gene-related polypeptide receptor activity" evidence=IEA

GO:0001605 "adrenomedullin receptor activity" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004948 "calcitonin receptor activity" evidence=IEA

UNIPROTKB|Q16602 CALCRL "Calcitonin gene-related peptide type 1 receptor" [Homo sapiens (taxid:9606)]

 Score = 290 (107.1 bits), Expect = 2.8e-25, P = 2.8e-25
 Identities = 63/159 (39%), Positives = 89/159 (55%)

Query:     1 MVANYFWMFCEGXXXXXXXXXXXXKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
             M  NYFWM CEG             +   + W++F+GW  PLI   ++A  R     D  
Sbjct:   223 MGCNYFWMLCEGIYLHTLIVVAVFAEKQHLMWYYFLGWGFPLIPACIHAIARSLYYND-- 280

Query:    61 YCWMN-DAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGI-RKAARAA 118
              CW++ D H  +I+  P+C ++LVNL  L+N++RVL+TKL    T+ A   +  KA RA 
Sbjct:   281 NCWISSDTHLLYIIHGPICAALLVNLFFLLNIVRVLITKL--KVTHQAESNLYMKAVRAT 338

Query:   119 LILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ 157
             LILVPL G+  +L+P+RPE K   E VYD    +L+  Q
Sbjct:   339 LILVPLLGIEFVLIPWRPEGKIA-EEVYDYIMHILMHFQ 376

GO:0001635 "calcitonin gene-related polypeptide receptor activity" evidence=IEA

GO:0004948 "calcitonin receptor activity" evidence=IEA

GO:0006937 "regulation of muscle contraction" evidence=IEA

GO:0007189 "adenylate cyclase-activating G-protein coupled receptor signaling pathway" evidence=IEA

GO:0007507 "heart development" evidence=IEA

GO:0048661 "positive regulation of smooth muscle cell proliferation" evidence=IEA

GO:0050728 "negative regulation of inflammatory response" evidence=IEA

GO:0031623 "receptor internalization" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006171 "cAMP biosynthetic process" evidence=IDA

GO:0001525 "angiogenesis" evidence=IDA

GO:0030819 "positive regulation of cAMP biosynthetic process" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA;TAS

GO:0015031 "protein transport" evidence=IDA

GO:0008565 "protein transporter activity" evidence=IDA

GO:0006816 "calcium ion transport" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0071329 "cellular response to sucrose stimulus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005764 "lysosome" evidence=IDA

GO:0001605 "adrenomedullin receptor activity" evidence=IDA

GO:0004930 "G-protein coupled receptor activity" evidence=TAS

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0007187 "G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger" evidence=TAS

UNIPROTKB|F1PI78 CALCRL "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 287 (106.1 bits), Expect = 6.2e-25, P = 6.2e-25
 Identities = 61/159 (38%), Positives = 89/159 (55%)

Query:     1 MVANYFWMFCEGXXXXXXXXXXXXKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
             M  NYFWM CEG             +   + W++F+GW  PLI   ++A  R     D  
Sbjct:   224 MGCNYFWMLCEGIYLHTLIVVAVFAEKQHLMWYYFLGWGFPLIPACIHAVARSLYYND-- 281

Query:    61 YCWMN-DAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGI-RKAARAA 118
              CW++ D H  +I+  P+C ++LVNL  L+N++RVL+TKL    T+ A   +  KA RA 
Sbjct:   282 NCWISSDTHLLYIIHGPICAALLVNLFFLLNIVRVLITKL--KVTHQAESNLYMKAVRAT 339

Query:   119 LILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ 157
             LILVPL G+  +L+P+RPE +   E +YD    +L+  Q
Sbjct:   340 LILVPLLGIEFVLIPWRPEGRMA-EEIYDYIMHILMHYQ 377

GO:0005886 "plasma membrane" evidence=IEA

GO:0071329 "cellular response to sucrose stimulus" evidence=IEA

GO:0048661 "positive regulation of smooth muscle cell proliferation" evidence=IEA

GO:0031623 "receptor internalization" evidence=IEA

GO:0030819 "positive regulation of cAMP biosynthetic process" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA

GO:0007507 "heart development" evidence=IEA

GO:0007189 "adenylate cyclase-activating G-protein coupled receptor signaling pathway" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IEA

GO:0006171 "cAMP biosynthetic process" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005768 "endosome" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

GO:0001635 "calcitonin gene-related polypeptide receptor activity" evidence=IEA

GO:0001605 "adrenomedullin receptor activity" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004948 "calcitonin receptor activity" evidence=IEA

UNIPROTKB|C5HV42 CALCRL "Calcitonin receptor-like receptor" [Gallus gallus (taxid:9031)]

 Score = 285 (105.4 bits), Expect = 9.8e-25, P = 9.8e-25
 Identities = 62/159 (38%), Positives = 88/159 (55%)

Query:     1 MVANYFWMFCEGXXXXXXXXXXXXKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
             M  NYFWM CEG             D   + W++ +GW  PLI  S++A  R     D  
Sbjct:   227 MGCNYFWMLCEGIHLHTLIVVAVFADKQHLMWYYLLGWGFPLIPASIHAVARSLYYND-- 284

Query:    61 YCWMN-DAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGI-RKAARAA 118
              CW++ D H  +I+  P+C ++LVNL  L+N++RVL+TKL    T+ A   +  KA RA 
Sbjct:   285 NCWISSDTHLLYIIHGPICAALLVNLFFLLNIVRVLITKL--KDTHKAESNLYMKAVRAT 342

Query:   119 LILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ 157
             LILVPL G+  +L P+RPE +   E VY+    +L+  Q
Sbjct:   343 LILVPLLGIEFVLFPWRPEGRIT-EEVYEYVMHILMHYQ 380

GO:0004948 "calcitonin receptor activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0001605 "adrenomedullin receptor activity" evidence=IEA

GO:0001635 "calcitonin gene-related polypeptide receptor activity" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

GO:0005768 "endosome" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006171 "cAMP biosynthetic process" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IEA

GO:0007189 "adenylate cyclase-activating G-protein coupled receptor signaling pathway" evidence=IEA

GO:0007507 "heart development" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA

GO:0030819 "positive regulation of cAMP biosynthetic process" evidence=IEA

GO:0031623 "receptor internalization" evidence=IEA

GO:0048661 "positive regulation of smooth muscle cell proliferation" evidence=IEA

GO:0071329 "cellular response to sucrose stimulus" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

RGD|2255 Calcrl "calcitonin receptor-like" [Rattus norvegicus (taxid:10116)]

 Score = 285 (105.4 bits), Expect = 1.1e-24, P = 1.1e-24
 Identities = 62/159 (38%), Positives = 88/159 (55%)

Query:     1 MVANYFWMFCEGXXXXXXXXXXXXKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
             M  NYFWM CEG             +   + W++F+GW  PL+   ++A  R     D  
Sbjct:   223 MGCNYFWMLCEGIYLHTLIVVAVFAEKQHLMWYYFLGWGFPLLPACIHAIARSLYYND-- 280

Query:    61 YCWMN-DAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGI-RKAARAA 118
              CW++ D H  +I+  P+C ++LVNL  L+N++RVL+TKL    T+ A   +  KA RA 
Sbjct:   281 NCWISSDTHLLYIIHGPICAALLVNLFFLLNIVRVLITKL--KVTHQAESNLYMKAVRAT 338

Query:   119 LILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ 157
             LILVPL G+  +L P+RPE K   E VYD    +L+  Q
Sbjct:   339 LILVPLLGIEFVLFPWRPEGKVA-EEVYDYVMHILMHYQ 376

GO:0001525 "angiogenesis" evidence=IEA;ISO

GO:0001605 "adrenomedullin receptor activity" evidence=IEA;ISO

GO:0001635 "calcitonin gene-related polypeptide receptor activity" evidence=IEA;ISO

GO:0004948 "calcitonin receptor activity" evidence=IMP

GO:0005764 "lysosome" evidence=IEA;ISO

GO:0005768 "endosome" evidence=IEA;ISO

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0006171 "cAMP biosynthetic process" evidence=IEA;ISO

GO:0006816 "calcium ion transport" evidence=IEA;ISO

GO:0006937 "regulation of muscle contraction" evidence=IMP

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=ISO

GO:0007189 "adenylate cyclase-activating G-protein coupled receptor signaling pathway" evidence=IEA;ISO

GO:0007507 "heart development" evidence=IEA;ISO

GO:0008284 "positive regulation of cell proliferation" evidence=ISO

GO:0008565 "protein transporter activity" evidence=IEA;ISO

GO:0015031 "protein transport" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0030819 "positive regulation of cAMP biosynthetic process" evidence=IEA;ISO

GO:0031623 "receptor internalization" evidence=IEA;ISO

GO:0048661 "positive regulation of smooth muscle cell proliferation" evidence=IEA;ISO

GO:0050728 "negative regulation of inflammatory response" evidence=IMP

GO:0071329 "cellular response to sucrose stimulus" evidence=IEA;ISO

UNIPROTKB|A6QP74 CALCRL "Calcitonin gene-related peptide type 1 receptor" [Bos taurus (taxid:9913)]

 Score = 281 (104.0 bits), Expect = 3.0e-24, P = 3.0e-24
 Identities = 61/159 (38%), Positives = 88/159 (55%)

Query:     1 MVANYFWMFCEGXXXXXXXXXXXXKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
             M  NYFWM CEG             +   + W++F+GW  PLI   ++A  R     D  
Sbjct:   224 MGCNYFWMLCEGIYLHTLVVVAVFAEKQHLMWYYFLGWGFPLIPACIHAVARRLYYND-- 281

Query:    61 YCWMN-DAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGI-RKAARAA 118
              CW++ D    +I+  P+C ++LVNL  L+N++RVL+TKL    T+ A   +  KA RA 
Sbjct:   282 NCWISSDTQLLYIIHGPICAALLVNLFFLLNIVRVLITKL--KVTHQAESNLYMKAVRAT 339

Query:   119 LILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ 157
             LILVPL G+  +L+P+RPE K   E +YD    +L+  Q
Sbjct:   340 LILVPLLGIEFVLIPWRPEGKIA-EEIYDYIINILMHYQ 377

GO:0005886 "plasma membrane" evidence=IDA

GO:0031623 "receptor internalization" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0043235 "receptor complex" evidence=IDA

GO:0005764 "lysosome" evidence=IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004948 "calcitonin receptor activity" evidence=IEA

UNIPROTKB|G3X6P6 CALCRL "Calcitonin gene-related peptide type 1 receptor" [Bos taurus (taxid:9913)]

 Score = 281 (104.0 bits), Expect = 3.0e-24, P = 3.0e-24
 Identities = 61/159 (38%), Positives = 88/159 (55%)

Query:     1 MVANYFWMFCEGXXXXXXXXXXXXKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
             M  NYFWM CEG             +   + W++F+GW  PLI   ++A  R     D  
Sbjct:   224 MGCNYFWMLCEGIYLHTLVVVAVFAEKQHLMWYYFLGWGFPLIPACIHAVARRLYYND-- 281

Query:    61 YCWMN-DAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGI-RKAARAA 118
              CW++ D    +I+  P+C ++LVNL  L+N++RVL+TKL    T+ A   +  KA RA 
Sbjct:   282 NCWISSDTQLLYIIHGPICAALLVNLFFLLNIVRVLITKL--KVTHQAESNLYMKAVRAT 339

Query:   119 LILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ 157
             LILVPL G+  +L+P+RPE K   E +YD    +L+  Q
Sbjct:   340 LILVPLLGIEFVLIPWRPEGKIA-EEIYDYIINILMHYQ 377

GO:0005886 "plasma membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004948 "calcitonin receptor activity" evidence=IEA

UNIPROTKB|G3N3V9 CALCRL "Calcitonin gene-related peptide type 1 receptor" [Bos taurus (taxid:9913)]

 Score = 281 (104.0 bits), Expect = 3.0e-24, P = 3.0e-24
 Identities = 61/159 (38%), Positives = 88/159 (55%)

Query:     1 MVANYFWMFCEGXXXXXXXXXXXXKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
             M  NYFWM CEG             +   + W++F+GW  PLI   ++A  R     D  
Sbjct:   225 MGCNYFWMLCEGIYLHTLVVVAVFAEKQHLMWYYFLGWGFPLIPACIHAVARRLYYND-- 282

Query:    61 YCWMN-DAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGI-RKAARAA 118
              CW++ D    +I+  P+C ++LVNL  L+N++RVL+TKL    T+ A   +  KA RA 
Sbjct:   283 NCWISSDTQLLYIIHGPICAALLVNLFFLLNIVRVLITKL--KVTHQAESNLYMKAVRAT 340

Query:   119 LILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ 157
             LILVPL G+  +L+P+RPE K   E +YD    +L+  Q
Sbjct:   341 LILVPLLGIEFVLIPWRPEGKIA-EEIYDYIINILMHYQ 378

GO:0005886 "plasma membrane" evidence=IEA

GO:0071329 "cellular response to sucrose stimulus" evidence=IEA

GO:0048661 "positive regulation of smooth muscle cell proliferation" evidence=IEA

GO:0031623 "receptor internalization" evidence=IEA

GO:0030819 "positive regulation of cAMP biosynthetic process" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA

GO:0007507 "heart development" evidence=IEA

GO:0007189 "adenylate cyclase-activating G-protein coupled receptor signaling pathway" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IEA

GO:0006171 "cAMP biosynthetic process" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005768 "endosome" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

GO:0001635 "calcitonin gene-related polypeptide receptor activity" evidence=IEA

GO:0001605 "adrenomedullin receptor activity" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004948 "calcitonin receptor activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	157
pfam00002	239	pfam00002, 7tm_2, 7 transmembrane receptor (Secret	1e-35

>gnl|CDD|215647 pfam00002, 7tm_2, 7 transmembrane receptor (Secretin family)

 Score =  123 bits (310), Expect = 1e-35
 Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 5/158 (3%)

Query: 1   MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIK 60
            +AN+FWM  EGL+L+  LV VF  +   + W+  IGW VP ++  ++A VR        
Sbjct: 82  FLANFFWMLVEGLYLYTLLVEVFFSERKYLWWYLLIGWGVPAVVVGIWAIVR--KGYGNP 139

Query: 61  YCWM-NDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAAL 119
            CW+ N+    WI   PV L ILVN    +N+LR+L+ KL S          ++ A++ L
Sbjct: 140 GCWLSNNGGFWWIFKGPVLLVILVNFIFFINILRILVQKLRSPDMGETDQYRKRLAKSTL 199

Query: 120 ILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ 157
           +L+PL G+  IL  F PE      +V+    A+L S Q
Sbjct: 200 VLLPLLGITWILFLFAPEDD--VSIVFLYLFAILNSFQ 235

This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs).They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognised. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97 ; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteristic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling. Length = 239

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	157
KOG4193|consensus	610		100.0
PF00002	242	7tm_2: 7 transmembrane receptor (Secretin family);	100.0
KOG4564|consensus	473		100.0
KOG4289|consensus	2531		99.85
PF05462	303	Dicty_CAR: Slime mold cyclic AMP receptor	99.46
PF02101	405	Ocular_alb: Ocular albinism type 1 protein; InterP	98.67
PF01534	328	Frizzled: Frizzled/Smoothened family membrane regi	97.83
PF11710	201	Git3: G protein-coupled glucose receptor regulatin	96.95
PF02076	283	STE3: Pheromone A receptor; InterPro: IPR001499 G-	93.55
PF00001	257	7tm_1: 7 transmembrane receptor (rhodopsin family)	92.51
PF10320	257	7TM_GPCR_Srsx: Serpentine type 7TM GPCR chemorecep	84.61

>KOG4193|consensus

Probab=100.00  E-value=3.9e-36  Score=252.00  Aligned_cols=155  Identities=30%  Similarity=0.494  Sum_probs=133.5

Q ss_pred             CchhhHHHhHHHHHHHHHHHHhhccCCcch-hhhhhhhcccceeeeEEeeeeeccc---cCCcccccccc-ccceeeeeh
Q psy15503          1 MVANYFWMFCEGLHLHLALVVVFVKDTSLM-RWFHFIGWVVPLIITSVYAYVRHTS---LEDIKYCWMND-AHSRWILTV   75 (157)
Q Consensus         1 ~Lasf~Wm~ve~~~l~~~lv~~~~~~~~~~-~~~~~~gwg~P~~iv~i~~~~~~~~---y~~~~~CWl~~-~~~~~~f~~   75 (157)
                      +||+|+||++||+|+|+.+++++...++++ ..|+++|||+|+++|+++++++.+.   |+.+++||+++ ++.+|.|+|
T Consensus       397 ~LaaF~Wm~leg~hl~~~~v~vf~~~~~~~~l~~~~~gwg~Pavvv~Isa~~~~~~~~~~~~~~~CWl~~~~~~~~~F~G  476 (610)
T KOG4193|consen  397 FLAAFFWMLLEGFHLYLLLVEVFRSRPRRRKLLYSLYGWGVPAVVVGVSALVDPDLEGQYGTPRVCWLDTQNGFIWSFLG  476 (610)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHhhhhHHHHhheeEEeccCccccccCCceEEecCCceEEEEeh
Confidence            589999999999999999999986655544 4565999999999999999999988   88899999996 689999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChhhHHHHHHHHhchhhhhcchhccccccccCCCchHHHHHHHHHHHhc
Q psy15503         76 PVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVS  155 (157)
Q Consensus        76 Pv~~ill~N~vif~~v~~~l~~k~~~~~~~~~~~~~~~~~r~~~~L~~llG~tW~~g~~~~~~~~~~~~~~~ylF~ilns  155 (157)
                      |+++++++|+++|+.+++++.+++...++..++.+..+..|.++.|+++||+||+||++...++  ...++.|+|+|+|+
T Consensus       477 Pv~~ii~~Ni~~Fv~t~~~l~~~~~~~~~~~~~~~~~~~~~~~l~L~~lLGlTW~fgi~s~~~~--~~~v~~YlFti~Na  554 (610)
T KOG4193|consen  477 PVTLIILVNIVMFVVTLKKLLRRLSKLQPIASKLENISLIRSALALLFLLGLTWIFGIFSWLPG--TSVVFAYLFTIFNA  554 (610)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cchHHHHHHHHHHH
Confidence            9999999999999999999887665444333333333678999999999999999999987643  58899999999999


Q ss_pred             CC
Q psy15503        156 SQ  157 (157)
Q Consensus       156 lQ  157 (157)
                      +|
T Consensus       555 lQ  556 (610)
T KOG4193|consen  555 LQ  556 (610)
T ss_pred             hh
Confidence            99

>PF00002 7tm_2: 7 transmembrane receptor (Secretin family); InterPro: IPR000832 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=100.00  E-value=3.3e-35  Score=223.29  Aligned_cols=154  Identities=31%  Similarity=0.564  Sum_probs=0.0

Q ss_pred             CchhhHHHhHHHHHHHHHHHHhhccCCcchhhhhhhhcccceeeeEEeeeeeccccCCcccccccc-ccceeeeehhHHH
Q psy15503          1 MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIKYCWMND-AHSRWILTVPVCL   79 (157)
Q Consensus         1 ~Lasf~Wm~ve~~~l~~~lv~~~~~~~~~~~~~~~~gwg~P~~iv~i~~~~~~~~y~~~~~CWl~~-~~~~~~f~~Pv~~   79 (157)
                      .+++|+||++||+|+|+.+++..+++++++++|+++|||+|+++++++++.+.++|++ +.||+++ ++..|+|.+|+++
T Consensus        83 ~la~f~Wm~~~~~~l~~~~~~~~~~~~~~~~~~~~~gwg~P~~iv~i~~~~~~~~y~~-~~CWl~~~~~~~~~f~~P~~~  161 (242)
T PF00002_consen   83 FLASFFWMLVEAFYLYRLLVKVFNSSRRRFWWYYLIGWGIPALIVVISVAVNSDGYGN-DNCWLSNDWGFIWAFVGPVLI  161 (242)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHhheeEEEeecccchhhheeeeeeecCcceeeeeeeeeccccccc-ccccccCCCceEEEEEecccc
Confidence            4789999999999999999998777778889999999999999999999999777766 6899996 5899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCCCChhhHH-HHHHHHhchhhhhcchhccccccccCCCchHHHHHHHHHHHhcCC
Q psy15503         80 SILVNLAILMNVLRVLLTKLHSNSTNPAPIGIR-KAARAALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ  157 (157)
Q Consensus        80 ill~N~vif~~v~~~l~~k~~~~~~~~~~~~~~-~~~r~~~~L~~llG~tW~~g~~~~~~~~~~~~~~~ylF~ilnslQ  157 (157)
                      ++++|+++++.+++++.++.+++++ +++++.+ +..|+.+.|+|++|++|+++++...++ ..+.+++|+|+++||+|
T Consensus       162 ~l~in~vi~~~v~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~L~~llg~~w~~~~~~~~~~-~~~~~~~~lf~i~nslQ  238 (242)
T PF00002_consen  162 ILLINIVIFILVLRVLVRKSRSSDK-SEKKKRRKKILRASLILLPLLGITWLFGILAVSDS-VDSLVFQYLFAILNSLQ  238 (242)
T ss_dssp             -------------------------------------------------------------------------------
T ss_pred             eecccchhheeeEEeehhhhhhhhh-hhccchhhhHHHHHHHHHHHHHHHheeeeeeeccc-chHHHHHHHHHHHHcCc
Confidence            9999999999999999887664333 3444444 489999999999999999998876542 35789999999999999

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The secretin-like GPCRs include secretin [], calcitonin [], parathyroid hormone/parathyroid hormone-related peptides [] and vasoactive intestinal peptide [], all of which activate adenylyl cyclase and the phosphatidyl-inositol-calcium pathway. These receptors contain seven transmembrane regions, in a manner reminiscent of the rhodopsins and other receptors believed to interact with G-proteins (however there is no significant sequence identity between these families, the secretin-like receptors thus bear their own unique '7TM' signature). Their N terminus is probably located on the extracellular side of the membrane and potentially glycosylated. This N-terminal region contains a long conserved region which allow the binding of large peptidic ligand such as glucagon, secretin, VIP and PACAP; this region contains five conserved cysteines residues which could be involved in disulphide bond. The C-terminal region of these receptor is probably cytoplasmic. Every receptor gene in this family is encoded on multiple exons, and several of these genes are alternatively spliced to yield functionally distinct products. ; GO: 0004930 G-protein coupled receptor activity, 0007186 G-protein coupled receptor protein signaling pathway, 0016021 integral to membrane; PDB: 3L2J_A 1BL1_A.

>KOG4564|consensus

Probab=100.00  E-value=2.6e-33  Score=227.39  Aligned_cols=152  Identities=41%  Similarity=0.761  Sum_probs=138.4

Q ss_pred             chhhHHHhHHHHHHHHHHHHhhccCCcchhhhhhhhcccceeeeEEeeeeeccccCCcccccccc-c-cceeeeehhHHH
Q psy15503          2 VANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIKYCWMND-A-HSRWILTVPVCL   79 (157)
Q Consensus         2 Lasf~Wm~ve~~~l~~~lv~~~~~~~~~~~~~~~~gwg~P~~iv~i~~~~~~~~y~~~~~CWl~~-~-~~~~~f~~Pv~~   79 (157)
                      +|+|+||++||+|||.+++..+.+++++++.|.++|||+|+++|++++.++.  |.+|..||..+ + +..|+.-||+.+
T Consensus       241 ~aNf~WmlvEGlYLhtLlv~~~~ser~~~~~y~~iGWG~P~v~v~~Wai~r~--~~~d~~CW~~~~~~~~~WIi~gPi~~  318 (473)
T KOG4564|consen  241 LANFFWMLVEGLYLHTLLVVAFFSERRYFWLYLLIGWGVPAVFVVVWAIVRL--YLEDTGCWDSNDTGHIWWIIRGPILL  318 (473)
T ss_pred             HHHHHHHHHHHHHHHHhhheeeccCccHHHHHHHHhhCCcHHHhhhHHhHhe--eeccccccccCCCcceEEEEeccHHH
Confidence            6899999999999999999999999999999999999999999999999984  45667899985 3 889999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCCCChhhHHHHHHHHhchhhhhcchhccccccccCCCchHHHHHHHHHHHhcCC
Q psy15503         80 SILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ  157 (157)
Q Consensus        80 ill~N~vif~~v~~~l~~k~~~~~~~~~~~~~~~~~r~~~~L~~llG~tW~~g~~~~~~~~~~~~~~~ylF~ilnslQ  157 (157)
                      .+++|+++|+.++|++.+|+|++++. |.+++||.+|+++.|+||||++.+..++.++++ ....+++|.-..++|+|
T Consensus       319 ai~vNf~flinIvrILv~KLr~~~~~-~~~~y~K~vKaTLvLIPLfGI~~ilf~~~P~~~-~~~~v~~~~~~~L~SfQ  394 (473)
T KOG4564|consen  319 AILVNFIFLINIVRILVTKLRASNAS-ETDQYRKLVKATLVLIPLFGIHYILFAFRPDED-TLREVYLYFELFLGSFQ  394 (473)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcccc-chHHHHHHHHHHHHHHHHcCCeeEEEEecCchH-HHHHHHHHHHHHHHhcc
Confidence            99999999999999999999988754 567799999999999999999999888887654 56789999999999999

>KOG4289|consensus

Probab=99.85  E-value=5.6e-22  Score=173.37  Aligned_cols=142  Identities=25%  Similarity=0.456  Sum_probs=120.0

Q ss_pred             CchhhHHHhHHHHHHHHHHHHhhccCCcchhhhhhhhcccceeeeEEeeeeeccccCCccccccc-cccceeeeehhHHH
Q psy15503          1 MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIKYCWMN-DAHSRWILTVPVCL   79 (157)
Q Consensus         1 ~Lasf~Wm~ve~~~l~~~lv~~~~~~~~~~~~~~~~gwg~P~~iv~i~~~~~~~~y~~~~~CWl~-~~~~~~~f~~Pv~~   79 (157)
                      +++.|.|.++||+|+||+++.  +.++..++.|+++|||+|+++.+.+++++       +.||++ +..++|.|.+|+++
T Consensus      2237 ~~stFaWlfl~gLhlYRml~e--~v~tg~mrfy~~vGwgvPa~itglavgld-------DfCwlS~h~~LiWsfagPigl 2307 (2531)
T KOG4289|consen 2237 YLSTFAWLFLEGLHLYRMLTE--NVDTGPMRFYYLVGWGVPALITGLAVGLD-------DFCWLSPHDTLIWSFAGPIGL 2307 (2531)
T ss_pred             HhhhHHHHHHHHHHHHHHHhc--cCCCCceeEEEEeecchhhheeeeeeccc-------ceeecccchheeeeeccccee
Confidence            478999999999999999999  45677899999999999999999988875       889999 57999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCCCChhhHHHHHHHHhchhhhhcchhccccccccCCCchHHHHHHHHHHHhcCC
Q psy15503         80 SILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQ  157 (157)
Q Consensus        80 ill~N~vif~~v~~~l~~k~~~~~~~~~~~~~~~~~r~~~~L~~llG~tW~~g~~~~~~~~~~~~~~~ylF~ilnslQ  157 (157)
                      .++.|...++...++-.+|++..-   .++..-+.++..+.++.++|.||++|+.+..++   ...|.|+|+.++.+|
T Consensus      2308 ~i~ms~~~~~lsa~vSc~~k~~~f---~kK~~v~~lq~~fl~llllsatwl~~ll~vn~~---~l~fhyl~a~~~~lq 2379 (2531)
T KOG4289|consen 2308 VILMSFYAAALSARVSCHKKYQVF---VKKGNVSVLQHSFLLLLLLSATWLLGLLAVNPD---PLEFHYLFASIIGLQ 2379 (2531)
T ss_pred             eehHHHHHHHHHHHHhhhhhheee---eeccchhhhHHHHHHHHHHHHHHHHHHHhcCCc---hHHHHHHHHHHHHhh
Confidence            999999999999987766543221   122223357888889999999999998887544   778999999999988

>PF05462 Dicty_CAR: Slime mold cyclic AMP receptor

Probab=99.46  E-value=1.4e-14  Score=113.62  Aligned_cols=130  Identities=15%  Similarity=0.387  Sum_probs=84.5

Q ss_pred             chhhHHHhHHHHHHHHHHHHhhccCCcchhhhhhhhcccceeeeEEeeeeeccccC-Cccccccccc--c-ceeeeehhH
Q psy15503          2 VANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLE-DIKYCWMNDA--H-SRWILTVPV   77 (157)
Q Consensus         2 Lasf~Wm~ve~~~l~~~lv~~~~~~~~~~~~~~~~gwg~P~~iv~i~~~~~~~~y~-~~~~CWl~~~--~-~~~~f~~Pv   77 (157)
                      +|++.|+++.|+++|+.+++..+..++..++|++++||+|++++.+...-+  .|| .++.||++++  . .+..|++|+
T Consensus        87 ~as~lWt~~iA~nly~~~~~~~~~~~k~e~~Y~l~~wGiPli~a~i~l~~~--~~g~~G~WCWI~~~~~~~r~~lfY~Pl  164 (303)
T PF05462_consen   87 LASFLWTLCIAFNLYLTFVKRYDELEKLEKYYHLVCWGIPLIPAVIPLIGN--DYGPAGNWCWIKPEWDVWRFALFYIPL  164 (303)
T ss_pred             HHHHHHHHHHHHHhhheeEEcCccHHHHHHHHHHHHHHHHHHHHHHHHHcc--CCCCCCCceeecCCCcchHHHHHHHHH
Confidence            688999999999999998876544455668899999999999776655433  344 3579999964  3 455799999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCCCCChhhHHHHHHHHhchhhhhcchhccccc
Q psy15503         78 CLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALILVPLFGLHHILLPF  134 (157)
Q Consensus        78 ~~ill~N~vif~~v~~~l~~k~~~~~~~~~~~~~~~~~r~~~~L~~llG~tW~~g~~  134 (157)
                      .+++.++.++...+.+...+..+...++.++++.+...|...-. .++=+.|+++.+
T Consensus       165 ~ii~~~~~ilv~i~~~~~y~~~~~~~sd~~~~~~~~~~kL~~Yp-~ifiicw~fa~I  220 (303)
T PF05462_consen  165 WIIIIISAILVGITMRYIYRVIRNGVSDNKDKHLKYQLKLVNYP-LIFIICWIFATI  220 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHccccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence            98888887766666655444333222222222233334433222 223347887654

>PF02101 Ocular_alb: Ocular albinism type 1 protein; InterPro: IPR001414 Ocular albinism type 1 (OA1) is an X-linked disorder characterised by severe impairment of visual acuity, retinal hypopigmentation and the presence of macromelanosomes

Probab=98.67  E-value=1.5e-08  Score=80.84  Aligned_cols=152  Identities=14%  Similarity=0.235  Sum_probs=101.2

Q ss_pred             CchhhHHHhHHHHHHHHHHHHhhccCCcchhhhhhhhcccceeeeEEeeeeeccccCCccccccc-cc--cceeeeehhH
Q psy15503          1 MVANYFWMFCEGLHLHLALVVVFVKDTSLMRWFHFIGWVVPLIITSVYAYVRHTSLEDIKYCWMN-DA--HSRWILTVPV   77 (157)
Q Consensus         1 ~Lasf~Wm~ve~~~l~~~lv~~~~~~~~~~~~~~~~gwg~P~~iv~i~~~~~~~~y~~~~~CWl~-~~--~~~~~f~~Pv   77 (157)
                      |.|+|.|.++-|+|.|+.+.+.  +.+..++.|+.++||.|++.++....+-+.  .+.+.|==+ +.  +.+..-++|+
T Consensus       127 YsAtfwWtfcYAVDv~Lv~~~~--ag~~~~~lYH~~aWgl~~lL~~~Gl~~Ly~--Ps~~~Ce~~l~~alphYvttY~Pl  202 (405)
T PF02101_consen  127 YSATFWWTFCYAVDVYLVIRRS--AGRSTIWLYHMMAWGLPALLCAEGLAMLYY--PSISRCESGLEHALPHYVTTYIPL  202 (405)
T ss_pred             HHHHHHHHHHHHHHHhheeecc--CCCcchhHHHHHHHHHHHHHHHhccceeec--CCHHhhhhhhhhcchhHHHHHHHH
Confidence            4689999999999999877654  234467899999999999988766654332  333456322 22  6788899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCC---CCChhhHHHHHHH-Hhchhhhhcchhccccc----c----ccCC------
Q psy15503         78 CLSILVNLAILMNVLRVLLTKLHSNST---NPAPIGIRKAARA-ALILVPLFGLHHILLPF----R----PEPK------  139 (157)
Q Consensus        78 ~~ill~N~vif~~v~~~l~~k~~~~~~---~~~~~~~~~~~r~-~~~L~~llG~tW~~g~~----~----~~~~------  139 (157)
                      +++++.|=++|..+.+.+-+.++.+..   ++|++. -+.+|. .+....++=+-|+-..+    .    ...+      
T Consensus       203 llVlvaNPiLy~~a~~~V~~~lk~r~g~yT~~ER~l-~~~IK~kFf~I~lVF~iCWlpNIINg~LL~~l~~~~~i~~~sl  281 (405)
T PF02101_consen  203 LLVLVANPILYIKAVRAVASLLKGRQGIYTENERRL-GAQIKIKFFKIMLVFYICWLPNIINGSLLFYLEMQPDINGGSL  281 (405)
T ss_pred             HHHHHhccHHHHHHHHHHHHHHhhccccccHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhHhHHHHHHhhcccccccccc
Confidence            999999999999999887765544432   223222 223333 34445666777775321    1    1111      


Q ss_pred             ---CchHHHHHHHHHHHhcCC
Q psy15503        140 ---SPWEMVYDVFSAVLVSSQ  157 (157)
Q Consensus       140 ---~~~~~~~~ylF~ilnslQ  157 (157)
                         .......+|+-.|+|-+|
T Consensus       282 ~~~~~a~~t~W~IMaIlNPlQ  302 (405)
T PF02101_consen  282 KQVRNAALTTWFIMAILNPLQ  302 (405)
T ss_pred             cchhhHHHHHHHHHHHHhHHH
Confidence               012457789999999887

A novel transcript from the OA1 critical region is expressed in high levels in RNA samples from retina and from melanoma and encodes a potential integral membrane protein []. This protein is of unknown function but is known to bind heterotrimeric G proteins.; GO: 0016020 membrane

>PF01534 Frizzled: Frizzled/Smoothened family membrane region; InterPro: IPR000539 The frizzled (fz) locus of Drosophila coordinates the cytoskeletons of epidermal cells, producing a parallel array of cuticular hairs and bristles [, ]

Probab=97.83  E-value=1.5e-05  Score=63.44  Aligned_cols=96  Identities=18%  Similarity=0.351  Sum_probs=72.2

Q ss_pred             chhhHHHhHHHHHHHHHHHHhhcc--CCcchhhhhhhhcccceeeeEEeeeeec-cccCCcccccccc-c--cceeeeeh
Q psy15503          2 VANYFWMFCEGLHLHLALVVVFVK--DTSLMRWFHFIGWVVPLIITSVYAYVRH-TSLEDIKYCWMND-A--HSRWILTV   75 (157)
Q Consensus         2 Lasf~Wm~ve~~~l~~~lv~~~~~--~~~~~~~~~~~gwg~P~~iv~i~~~~~~-~~y~~~~~CWl~~-~--~~~~~f~~   75 (157)
                      +|+..|=.+.++.-|......-.+  -+++-..+++++|++|++.+++.+..+. ++..-.+.|++++ +  ......++
T Consensus       106 mAa~~WWviLt~~W~lsa~~kw~~e~i~~~s~yfH~~aW~iP~~~ti~vL~~~~VdgD~ltGiC~Vg~~~~~~l~~fvl~  185 (328)
T PF01534_consen  106 MAASLWWVILTLTWFLSAGLKWGSEAIEKKSSYFHLVAWGIPAVLTIAVLALRKVDGDELTGICFVGNQNPSALRGFVLA  185 (328)
T ss_pred             hHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhhhHHhhhhHHHHHHHHHhcccccccccceeEEeCCCHHHHhHHHHH
Confidence            677788888877777776654432  2355667899999999998877776554 4333457899985 3  46677999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHH
Q psy15503         76 PVCLSILVNLAILMNVLRVLLT   97 (157)
Q Consensus        76 Pv~~ill~N~vif~~v~~~l~~   97 (157)
                      |.++.+++...+++.....+.|
T Consensus       186 Pl~i~l~iG~~fL~~G~~~l~r  207 (328)
T PF01534_consen  186 PLFIYLLIGTVFLLAGFVSLFR  207 (328)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999888777665

In fz mutants, the orientation of individual hairs with respect both to their neighbours and to the organism as a whole is altered. In the wild-type wing, all hairs point towards the distal tip []. In the developing wing, fz has 2 functions: it is required for the proximal-distal transmission of an intracellular polarity signal; and it is required for cells to respond to the polarity signal. Fz produces an mRNA that encodes an integral membrane protein with 7 putative transmembrane (TM) domains. This protein should contain both extracellular and cytoplasmic domains, which could function in the transmission and interpretation of polarity information []. This signature is usually found downstream of the Fz domain (IPR000024 from INTERPRO); GO: 0007166 cell surface receptor linked signaling pathway, 0016020 membrane

>PF11710 Git3: G protein-coupled glucose receptor regulating Gpa2; InterPro: IPR023041 This entry contains a functionally uncharacterised region belonging to the Git3 G-protein coupled receptor

Probab=96.95  E-value=0.00032  Score=52.25  Aligned_cols=98  Identities=18%  Similarity=0.362  Sum_probs=66.5

Q ss_pred             hhhHHHhHHHHHHHHHHHHhhccC------Cc---chh-hhhhhhcccceeeeEEeeee-eccccCC-ccccccccc---
Q psy15503          3 ANYFWMFCEGLHLHLALVVVFVKD------TS---LMR-WFHFIGWVVPLIITSVYAYV-RHTSLED-IKYCWMNDA---   67 (157)
Q Consensus         3 asf~Wm~ve~~~l~~~lv~~~~~~------~~---~~~-~~~~~gwg~P~~iv~i~~~~-~~~~y~~-~~~CWl~~~---   67 (157)
                      ++=.|.++.|+|.|..+.+...+.      +.   +.+ .-+.+.+++|++.......- +.+.|++ +..||++++   
T Consensus        87 ~sd~~ilaIAihT~l~v~~~~~~~~~~~~~~~gl~~~~~~v~~~~~~~~~~~~~la~i~~~~~~Y~~~g~WCWi~~~~~~  166 (201)
T PF11710_consen   87 ASDLWILAIAIHTFLIVFRPNWKRKRSKNVEGGLYPYRYWVWVIWILVPLLLASLAFIGLGGPGYGPAGAWCWIPSRYEW  166 (201)
T ss_pred             HHHHHHHHHHHHHHHHHhcCccccccccccccceEEeeeeeehHHHHHHHHHHHHHHhccccCcccccCcEEEECCCcHH
Confidence            344688999999998887761110      10   111 12344457777766554332 3455654 679999964   


Q ss_pred             cceeeeehhHHHHHHHHHHHHHHHHHHHHHHhc
Q psy15503         68 HSRWILTVPVCLSILVNLAILMNVLRVLLTKLH  100 (157)
Q Consensus        68 ~~~~~f~~Pv~~ill~N~vif~~v~~~l~~k~~  100 (157)
                      ..++.-.+|..++....+++++.+...++++.|
T Consensus       167 ~Rl~l~y~~~~~~~~~~i~iY~~if~~lrr~~~  199 (201)
T PF11710_consen  167 YRLWLHYIWRFIIIFAIIIIYIAIFFYLRRRIR  199 (201)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence            468889999999999999999999888776554

Git3 is one of six proteins required for glucose-triggered adenylate cyclase activation, and is a G protein-coupled receptor responsible for the activation of adenylate cyclase through Gpa2 - heterotrimeric G protein alpha subunit, part of the glucose-detection pathway. Git3 contains seven predicted transmembrane domains, a third cytoplasmic loop and a cytoplasmic tail []. This is the conserved N-terminal domain of the member proteins.

>PF02076 STE3: Pheromone A receptor; InterPro: IPR001499 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=93.55  E-value=0.051  Score=42.63  Aligned_cols=67  Identities=10%  Similarity=0.170  Sum_probs=55.2

Q ss_pred             hhhhhcccceeeeEEeeeeeccccC--Cccccccc-c-c-cceeeeehhHHHHHHHHHHHHHHHHHHHHHHh
Q psy15503         33 FHFIGWVVPLIITSVYAYVRHTSLE--DIKYCWMN-D-A-HSRWILTVPVCLSILVNLAILMNVLRVLLTKL   99 (157)
Q Consensus        33 ~~~~gwg~P~~iv~i~~~~~~~~y~--~~~~CWl~-~-~-~~~~~f~~Pv~~ill~N~vif~~v~~~l~~k~   99 (157)
                      =.++|+|.|.+.++....++..-|+  ++..|.-. + + +.+..+..|..+.-++..+.-+.+++.+.+++
T Consensus       107 d~~i~~g~Pil~m~l~yivQ~~Rf~I~e~~GC~~~~~~s~~~~~l~~iwp~i~~lia~vYa~lt~~~f~~rr  178 (283)
T PF02076_consen  107 DLLICFGIPILQMALHYIVQGHRFDIVEDVGCYPAIYPSWPTIFLFIIWPPIFSLIAAVYAILTLRRFIRRR  178 (283)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccceeEecccCCccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3689999999999999988877665  56789877 3 3 66777889999999999999999998887654

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). Little is known about the structure and function of the mating factor receptors, STE2 and STE3. It is believed, however, that they are integral membrane proteins that may be involved in the response to mating factors on the cell membrane [, , ]. The amino acid sequences of both receptors contain high proportions of hydrophobic residues grouped into 7 domains, in a manner reminiscent of the rhodopsins and other receptors believed to interact with G-proteins. However, while a similar 3D framework has been proposed to account for this, there is no significant sequence similarity either between STE2 and STE3, or between these and the rhodopsin-type family: the receptors thus bear their own unique '7TM' signatures. The STE3 gene of Saccharomyces cerevisiae (Baker's yeast) is the cell-surface receptor that binds the 13-residue lipopeptide a-factor. Several related fungal pheromone receptor sequences are known: these include pheromone B alpha 1 and B alpha 3, and pheromone B beta 1 receptors from Schizophyllum commune; pheromone receptor 1 from Ustilago hordei; and pheromone receptors 1 and 2 from Ustilago maydis. Members of the family share about 20% sequence identity.; GO: 0004932 mating-type factor pheromone receptor activity, 0007186 G-protein coupled receptor protein signaling pathway, 0016021 integral to membrane

>PF00001 7tm_1: 7 transmembrane receptor (rhodopsin family) Rhodopsin-like GPCR superfamily signature 5-hydroxytryptamine 7 receptor signature bradykinin receptor signature gastrin receptor signature melatonin receptor signature olfactory receptor signature; InterPro: IPR000276 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=92.51  E-value=0.065  Score=39.39  Aligned_cols=123  Identities=17%  Similarity=0.278  Sum_probs=60.7

Q ss_pred             hhHHHhHHHHHHHHHHHHhhcc----CCcchhhhhhhhcccceeeeEEeeee-e--ccccCCccccccccc-c-------
Q psy15503          4 NYFWMFCEGLHLHLALVVVFVK----DTSLMRWFHFIGWVVPLIITSVYAYV-R--HTSLEDIKYCWMNDA-H-------   68 (157)
Q Consensus         4 sf~Wm~ve~~~l~~~lv~~~~~----~~~~~~~~~~~gwg~P~~iv~i~~~~-~--~~~y~~~~~CWl~~~-~-------   68 (157)
                      +..-+...++|=|..+......    ++++........|..+.+........ .  ...+++...|+.+.. .       
T Consensus        71 s~~~~~~is~dRy~~i~~p~~~~~~~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~  150 (257)
T PF00001_consen   71 SIFSLVAISIDRYLAICHPLRYRRIRTRRRARIIIILIWIISFLISLPPLFFSWVYFVSDGSQSFCFIDFSSSSSQIYFI  150 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHSHHTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEESTCCCEEEEESCSSSHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            4445566677777777654321    12334455677788887755444222 1  111122568998742 2       


Q ss_pred             --ceeeeehhHHHHHHHHHHHHHHHHHHHHHHhccCCC------CCChhhHHHHHHHHhchhhhhcchhc
Q psy15503         69 --SRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNST------NPAPIGIRKAARAALILVPLFGLHHI  130 (157)
Q Consensus        69 --~~~~f~~Pv~~ill~N~vif~~v~~~l~~k~~~~~~------~~~~~~~~~~~r~~~~L~~llG~tW~  130 (157)
                        ....+..|..+++..+    ..+.+.++++.+..+.      +.+.++.+|..|..+.+...+-+.|.
T Consensus       151 ~~~~~~~~~p~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~  216 (257)
T PF00001_consen  151 YFFIVFFILPLIIILICY----IRILRKLRRQRKRIKSQSSSSSRRRSRRERRAARTLLIIVLVFLLCWL  216 (257)
T ss_dssp             HHHHHHTHHHHHHHHHHH----HHHHHHHHHHHHCTCCHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccceeeeeeec----ccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence              1223445555554444    3444444443332221      11122334445555556666666776

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The rhodopsin-like GPCRs themselves represent a widespread protein family that includes hormone, neurotransmitter and light receptors, all of which transduce extracellular signals through interaction with guanine nucleotide-binding (G) proteins. Although their activating ligands vary widely in structure and character, the amino acid sequences of the receptors are very similar and are believed to adopt a common structural framework comprising 7 transmembrane (TM) helices [, , ].; GO: 0007186 G-protein coupled receptor protein signaling pathway, 0016021 integral to membrane; PDB: 2KI9_A 3QAK_A 2YDV_A 3VGA_A 3PWH_A 3RFM_A 3EML_A 3VG9_A 3REY_A 3UZA_A ....

>PF10320 7TM_GPCR_Srsx: Serpentine type 7TM GPCR chemoreceptor Srsx; InterPro: IPR019424 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=84.61  E-value=0.44  Score=36.57  Aligned_cols=26  Identities=15%  Similarity=0.151  Sum_probs=19.4

Q ss_pred             hhhHHHHHHHHhchhhhhcchhcccc
Q psy15503        108 PIGIRKAARAALILVPLFGLHHILLP  133 (157)
Q Consensus       108 ~~~~~~~~r~~~~L~~llG~tW~~g~  133 (157)
                      +++.||..|.......+.-.+|.+..
T Consensus       179 ~~~~~kv~ksL~v~v~i~i~~w~~s~  204 (257)
T PF10320_consen  179 SSRSKKVFKSLKVTVIIFIFSWFLSQ  204 (257)
T ss_pred             chhHHHHHHHhhhheeeeeHHHHHHH
Confidence            34456677888888888899999744

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The nematode Caenorhabditis elegans has only 14 types of chemosensory neuron, yet is able to sense and respond to several hundred different chemicals because each neuron detects several stimuli []. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' []. Chemoreception in C. elegans is mediated by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs). More than 1300 potential chemoreceptor genes have been identified in C. elegans, which are generally prefixed sr for serpentine receptor. The receptor superfamilies include Sra (Sra, Srb, Srab, Sre), Str (Srh, Str, Sri, Srd, Srj, Srm, Srn) and Srg (Srx, Srt, Srg, Sru, Srv, Srxa), as well as the families Srw, Srz, Srbc, Srsx and Srr [, , ]. Many of these proteins have homologues in Caenorhabditis briggsae. This entry represents serpentine receptor class sx (Srsx), which is a solo family amongst the superfamilies of chemoreceptors. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	157
4ea3_A	434	Fusion protein of nociceptin receptor and cytochr;	92.43
4amj_A	315	Beta-1 adrenergic receptor; membrane protein, 7TMR	90.94
2z73_A	448	Rhodopsin; visual pigment, GQ-type, G-protein coup	87.83
2ks9_A	364	Substance-P receptor; water, autodock, NK1, neurop	87.15
3rze_A	452	Histamine H1 receptor, lysozyme chimera; structura	84.22
4dkl_A	464	MU-type opioid receptor, lysozyme chimera; G-prote	81.27
3sn6_R	514	Lysozyme, beta-2 adrenergic receptor; seven transm	80.31

>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*

Probab=90.94  E-value=0.074  Score=39.39  Aligned_cols=124  Identities=14%  Similarity=0.176  Sum_probs=59.9

Q ss_pred             hhHHHhHHHHHHHHHHHHhhcc----CCcchhhhhhhhcccceeeeEEeeeeecc--ccCCcccccccc-------c---
Q psy15503          4 NYFWMFCEGLHLHLALVVVFVK----DTSLMRWFHFIGWVVPLIITSVYAYVRHT--SLEDIKYCWMND-------A---   67 (157)
Q Consensus         4 sf~Wm~ve~~~l~~~lv~~~~~----~~~~~~~~~~~gwg~P~~iv~i~~~~~~~--~y~~~~~CWl~~-------~---   67 (157)
                      +..-+.+.+++=|..+......    .+++........|..+++...........  ...+...|..+.       +   
T Consensus        98 S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~  177 (315)
T 4amj_A           98 SIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAY  177 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCTTCCCCCCCHHH
T ss_pred             HHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhccccCCCccccccccccchhhcchHH
Confidence            4445556777777777654321    22344455677788776654332221111  111123444321       0   


Q ss_pred             ---cceeeeehhHHHHHHHHHHHHHHHHHHHHHHhccC---CC-CCCh---hhHHHHHHHHhchhhhhcchhcc
Q psy15503         68 ---HSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSN---ST-NPAP---IGIRKAARAALILVPLFGLHHIL  131 (157)
Q Consensus        68 ---~~~~~f~~Pv~~ill~N~vif~~v~~~l~~k~~~~---~~-~~~~---~~~~~~~r~~~~L~~llG~tW~~  131 (157)
                         .....+..|..+++..+..++    +.+.++.+..   ++ +.++   ++.+|..|....+...+-+.|.-
T Consensus       178 ~~~~~~~~~~ip~~ii~~~y~~i~----~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~f~i~~~P  247 (315)
T 4amj_A          178 AIASSIISFYIPLLIMIFVALRVY----REAKEQIRKIDRASKRKTSRVMLMREHKALKTLGIIMGVFTLCWLP  247 (315)
T ss_dssp             HHHHHCCCCCHHHHHHHHHHHHHH----HHHHTC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHhccCcccccccchhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence               124557788888877665443    3333321111   11 1111   13345566666667777788873

>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*

Probab=87.83  E-value=0.46  Score=37.39  Aligned_cols=88  Identities=9%  Similarity=0.041  Sum_probs=43.1

Q ss_pred             hhHHHhHHHHHHHHHHHHhhccC----CcchhhhhhhhcccceeeeEEeee-eecccc-CCcccccccc---c--c----
Q psy15503          4 NYFWMFCEGLHLHLALVVVFVKD----TSLMRWFHFIGWVVPLIITSVYAY-VRHTSL-EDIKYCWMND---A--H----   68 (157)
Q Consensus         4 sf~Wm~ve~~~l~~~lv~~~~~~----~~~~~~~~~~gwg~P~~iv~i~~~-~~~~~y-~~~~~CWl~~---~--~----   68 (157)
                      +...+.+.+++=|..+..-....    +++.....++.|..+++....... .+...+ +....|+...   +  .    
T Consensus       122 S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~  201 (448)
T 2z73_A          122 SIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLCNCSFDYISRDSTTRSNI  201 (448)
T ss_dssp             HHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGGTSSCEEECTTSSSEEECCSCCSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHHHHHhceeeeeecCCceeEecccccCCcchhHHH
Confidence            34455566666666665433211    123344567778877665433222 111111 2234676542   1  0    


Q ss_pred             ---ceeeeehhHHHHHHHHHHHHHHH
Q psy15503         69 ---SRWILTVPVCLSILVNLAILMNV   91 (157)
Q Consensus        69 ---~~~~f~~Pv~~ill~N~vif~~v   91 (157)
                         ....+..|.++++..+..++..+
T Consensus       202 ~~~~~~~~~lP~~ii~~~y~~I~~~l  227 (448)
T 2z73_A          202 LCMFILGFFGPILIIFFCYFNIVMSV  227 (448)
T ss_dssp             HHHHHHTTHHHHHHHHHHHHHHHTTH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               12235677777777666555444

>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A

Probab=87.15  E-value=0.06  Score=41.10  Aligned_cols=20  Identities=20%  Similarity=0.418  Sum_probs=14.1

Q ss_pred             HHHHHHHHhchhhhhcchhc
Q psy15503        111 IRKAARAALILVPLFGLHHI  130 (157)
Q Consensus       111 ~~~~~r~~~~L~~llG~tW~  130 (157)
                      .+|..|..+.+...+-+.|.
T Consensus       243 ~~k~~~~~~~v~~~f~~~~~  262 (364)
T 2ks9_A          243 KRKVVKMMIVVVCTFAICWL  262 (364)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHH
Confidence            45566777777777778886

>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}

Probab=84.22  E-value=0.77  Score=35.78  Aligned_cols=86  Identities=9%  Similarity=-0.005  Sum_probs=43.4

Q ss_pred             hhHHHhHHHHHHHHHHHHhhccC----CcchhhhhhhhcccceeeeEEeeeeeccc----cCCccccccccc-c------
Q psy15503          4 NYFWMFCEGLHLHLALVVVFVKD----TSLMRWFHFIGWVVPLIITSVYAYVRHTS----LEDIKYCWMNDA-H------   68 (157)
Q Consensus         4 sf~Wm~ve~~~l~~~lv~~~~~~----~~~~~~~~~~gwg~P~~iv~i~~~~~~~~----y~~~~~CWl~~~-~------   68 (157)
                      +..-+.+.+++=|..+.......    +++.....+..|.++++......+.....    +.....|+.+.. .      
T Consensus        95 s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~  174 (452)
T 3rze_A           95 SIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPILGWNHFMQQTSVRREDKCETDFYDVTWFKVM  174 (452)
T ss_dssp             HHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHHCCCC-------CCSSSSCCSCTTCHHHHHH
T ss_pred             HHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCeecCCCcccHHHHHH
Confidence            34455667777777776544221    12333455677888766544322222211    123457876532 1      


Q ss_pred             -ceeeeehhHHHHHHHHHHHHH
Q psy15503         69 -SRWILTVPVCLSILVNLAILM   89 (157)
Q Consensus        69 -~~~~f~~Pv~~ill~N~vif~   89 (157)
                       ....+..|.++++..+..++.
T Consensus       175 ~~~~~~~~p~~ii~~~y~~I~~  196 (452)
T 3rze_A          175 TAIINFYLPTLLMLWFYAKIYK  196 (452)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence             123356666666666555443

>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*

Probab=81.27  E-value=0.37  Score=37.75  Aligned_cols=85  Identities=8%  Similarity=0.108  Sum_probs=44.5

Q ss_pred             hhHHHhHHHHHHHHHHHHhhcc----CCcchhhhhhhhcccceeeeEEeeee-eccccCCcccccccc-cc---------
Q psy15503          4 NYFWMFCEGLHLHLALVVVFVK----DTSLMRWFHFIGWVVPLIITSVYAYV-RHTSLEDIKYCWMND-AH---------   68 (157)
Q Consensus         4 sf~Wm~ve~~~l~~~lv~~~~~----~~~~~~~~~~~gwg~P~~iv~i~~~~-~~~~y~~~~~CWl~~-~~---------   68 (157)
                      +..-+.+.+++=|..+......    .+++.....+..|.+++++....... ....+.++..|.... ..         
T Consensus       103 s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~  182 (464)
T 4dkl_A          103 SIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTWYWENLLK  182 (464)
T ss_dssp             HHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCCEEETTEEECCBCCSSSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHHheeecccCCCceEEeecCCcchHHHHHHH
Confidence            3445556777777777654321    22334455677788776655433322 122223445687652 11         


Q ss_pred             ---ceeeeehhHHHHHHHHHHHH
Q psy15503         69 ---SRWILTVPVCLSILVNLAIL   88 (157)
Q Consensus        69 ---~~~~f~~Pv~~ill~N~vif   88 (157)
                         ....+..|.++++..+..++
T Consensus       183 ~~~~~~~~~~p~~ii~~~y~~i~  205 (464)
T 4dkl_A          183 ICVFIFAFIMPVLIITVCYGLMI  205 (464)
T ss_dssp             HHHHHHTTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence               12235667666666665443

>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*

Probab=80.31  E-value=0.64  Score=37.46  Aligned_cols=86  Identities=12%  Similarity=0.185  Sum_probs=41.3

Q ss_pred             HHHhHHHHHHHHHHHHhhc----cCCcchhhhhhhhcccceeeeEEeeeeecccc--CCcccccccc-------c-----
Q psy15503          6 FWMFCEGLHLHLALVVVFV----KDTSLMRWFHFIGWVVPLIITSVYAYVRHTSL--EDIKYCWMND-------A-----   67 (157)
Q Consensus         6 ~Wm~ve~~~l~~~lv~~~~----~~~~~~~~~~~~gwg~P~~iv~i~~~~~~~~y--~~~~~CWl~~-------~-----   67 (157)
                      .-+.+.+++=|..+.....    ..+++.....+..|.++++...+........+  .+...|...+       +     
T Consensus       271 ~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~y~~  350 (514)
T 3sn6_R          271 ETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFTNQAYAI  350 (514)
T ss_dssp             HHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC---CHHHHHHHSSSCCCCCCCHHHHH
T ss_pred             HHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhhccceecccCcccceeecccccccccccHHHH
Confidence            3445566666766654432    12233445567778877665432222111111  1122343321       0     


Q ss_pred             -cceeeeehhHHHHHHHHHHHHHHH
Q psy15503         68 -HSRWILTVPVCLSILVNLAILMNV   91 (157)
Q Consensus        68 -~~~~~f~~Pv~~ill~N~vif~~v   91 (157)
                       .....+..|.++++..+..++..+
T Consensus       351 ~~~~~~~~lP~~ii~~~y~~I~~~l  375 (514)
T 3sn6_R          351 ASSIVSFYVPLVIMVFVYSRVFQEA  375 (514)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             122336677777777776665444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00