Psyllid ID: psy15609
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 567 | 2.2.26 [Sep-21-2011] | |||||||
| Q6DH69 | 532 | Fatty-acid amide hydrolas | yes | N/A | 0.887 | 0.945 | 0.383 | 3e-88 | |
| Q6GMR7 | 532 | Fatty-acid amide hydrolas | yes | N/A | 0.834 | 0.889 | 0.378 | 8e-88 | |
| Q05AM4 | 526 | Fatty-acid amide hydrolas | no | N/A | 0.832 | 0.897 | 0.371 | 6e-77 | |
| Q8PXJ1 | 476 | Glutamyl-tRNA(Gln) amidot | yes | N/A | 0.763 | 0.909 | 0.279 | 1e-30 | |
| Q46E35 | 475 | Glutamyl-tRNA(Gln) amidot | yes | N/A | 0.744 | 0.888 | 0.264 | 3e-30 | |
| Q891I1 | 485 | Glutamyl-tRNA(Gln) amidot | yes | N/A | 0.783 | 0.915 | 0.281 | 2e-29 | |
| B1L1G9 | 485 | Glutamyl-tRNA(Gln) amidot | yes | N/A | 0.767 | 0.896 | 0.270 | 5e-29 | |
| Q8THJ1 | 476 | Glutamyl-tRNA(Gln) amidot | yes | N/A | 0.761 | 0.907 | 0.262 | 7e-29 | |
| C3KU97 | 485 | Glutamyl-tRNA(Gln) amidot | yes | N/A | 0.754 | 0.882 | 0.268 | 8e-29 | |
| C1FLD9 | 485 | Glutamyl-tRNA(Gln) amidot | yes | N/A | 0.768 | 0.898 | 0.261 | 2e-28 |
| >sp|Q6DH69|FAH2A_DANRE Fatty-acid amide hydrolase 2-A OS=Danio rerio GN=faah2a PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 326 bits (836), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 211/550 (38%), Positives = 311/550 (56%), Gaps = 47/550 (8%)
Query: 32 LTMFLTFVRSL---VDWCIDFVFSFIYEEQKFA---LPPVENELLLQSATTVATKIKNKA 85
LT F F+ L V W + F +Q+ LPP+ N LLL SA +A KI+ K
Sbjct: 3 LTRFERFLGRLLRAVVWILFAAFKLFAPQQRHGVSRLPPITNPLLLLSAMQLARKIRRKE 62
Query: 86 ISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRFSEALEEA-- 143
++ EVV+ +I RI ++VN IN++V +RFS AL+EA
Sbjct: 63 VTSVEVVQAYIDRI----------------------QEVNPLINAMVKDRFSAALQEAAQ 100
Query: 144 --KLLDKQIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKGTEDAYIVER 201
KL++++ +++ + P LGVP T K + A +G+ S GLL R+D+ DA V
Sbjct: 101 VDKLIEEETGGEDVLEDRLPLLGVPITVKEAFALQGMPNSTGLLTRRDLVSGADAPSVAL 160
Query: 202 LKSAGAILLGVTNVPELCLWSETRNMVFGQTNNPYNLSRTVGGSSGGESAIVSACGSPLG 261
LK AGAI LGVTN ELC+W E+ N ++G TNNPY+ R VGGSSGGE +I+ A S +G
Sbjct: 161 LKRAGAIPLGVTNCSELCMWLESHNHLYGITNNPYDFERIVGGSSGGEGSILGAGSSVIG 220
Query: 262 LGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTMVSAGPIVKHAEDILPF 321
+G+DIGGS R+P F+ G++G+K + G +N +G + + + GP+ ++AED++P
Sbjct: 221 IGSDIGGSIRIPCFFNGIFGHKPSVGIVNNEGQYPPASGQQMGFLCTGPMCRYAEDLIPM 280
Query: 322 IKCLVIPEKLHQLKLDRTHDLKQLKVFYVEQPGDLK-VSPVSGEMIGAIRKCVRALDEIT 380
+ + P +L L DLK+L+ F V G VSPV +++ A + V+ L+
Sbjct: 281 LSIMGGPNA-EKLSLFTEVDLKKLRFFSVPHNGGSHLVSPVEPQLLHAQKMVVKRLEADL 339
Query: 381 EVSAEKLENIKQFKKSYALWRYWMT------KEPGNFARDLVNQEGEASW--WRETIKIF 432
V ++L I Q K S+ +W M K P FA +L+++ G+ W W E K F
Sbjct: 340 GVKVQELL-IPQLKYSFQIWGTMMASPGKDGKPPTTFA-ELMSEGGKKVWPAW-ELFKWF 396
Query: 433 LGMSDHTLPAI-MKLIDMHLPLPKDDWAQEQTDKLRKKLTDVLADDGVLIFPSCPCPATY 491
LG S HTL AI + L+++ + +Q + L+++L ++L DGVL++PS P A
Sbjct: 397 LGFSSHTLAAIGLALVELFQSSHPSPFIMQQKESLQQELEELLGTDGVLLYPSHPLIAQK 456
Query: 492 HYTTFFRPYNFAYWAIFNVLGFPVVNVPVGLSKDGLPLGVQIVATTNNDKLCIDVANYLE 551
H+ F P+NF+Y IFN+LG PV P+GLS +GLPLGVQIVA D+L + A YLE
Sbjct: 457 HHHPIFTPFNFSYTGIFNILGLPVTQCPLGLSAEGLPLGVQIVAGKLQDRLSLATALYLE 516
Query: 552 KQSVIGWKPP 561
K + GW+ P
Sbjct: 517 K-AFGGWREP 525
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Danio rerio (taxid: 7955) EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: 9EC: 9 |
| >sp|Q6GMR7|FAAH2_HUMAN Fatty-acid amide hydrolase 2 OS=Homo sapiens GN=FAAH2 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q05AM4|FAH2B_DANRE Fatty-acid amide hydrolase 2-B OS=Danio rerio GN=faah2b PE=2 SV=1 | Back alignment and function description |
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| >sp|Q8PXJ1|GATA_METMA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=gatA PE=3 SV=1 | Back alignment and function description |
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| >sp|Q46E35|GATA_METBF Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=gatA PE=3 SV=1 | Back alignment and function description |
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| >sp|Q891I1|GATA_CLOTE Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium tetani (strain Massachusetts / E88) GN=gatA PE=3 SV=1 | Back alignment and function description |
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| >sp|B1L1G9|GATA_CLOBM Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=gatA PE=3 SV=1 | Back alignment and function description |
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| >sp|Q8THJ1|GATA_METAC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=gatA PE=3 SV=1 | Back alignment and function description |
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| >sp|C3KU97|GATA_CLOB6 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain 657 / Type Ba4) GN=gatA PE=3 SV=1 | Back alignment and function description |
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| >sp|C1FLD9|GATA_CLOBJ Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Kyoto / Type A2) GN=gatA PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 567 | ||||||
| 193700076 | 552 | PREDICTED: fatty-acid amide hydrolase 2- | 0.941 | 0.967 | 0.470 | 1e-141 | |
| 242007160 | 520 | amidotransferase subunit A, putative [Pe | 0.895 | 0.976 | 0.460 | 1e-138 | |
| 328722970 | 546 | PREDICTED: fatty-acid amide hydrolase 2- | 0.931 | 0.967 | 0.460 | 1e-135 | |
| 91088991 | 537 | PREDICTED: similar to CG5112 CG5112-PA [ | 0.902 | 0.953 | 0.466 | 1e-134 | |
| 383858864 | 506 | PREDICTED: fatty-acid amide hydrolase 2- | 0.883 | 0.990 | 0.456 | 1e-127 | |
| 332376927 | 530 | unknown [Dendroctonus ponderosae] | 0.887 | 0.949 | 0.452 | 1e-127 | |
| 332023100 | 536 | Fatty-acid amide hydrolase 2 [Acromyrmex | 0.890 | 0.942 | 0.445 | 1e-121 | |
| 157115291 | 542 | amidase [Aedes aegypti] gi|108883507|gb| | 0.929 | 0.972 | 0.414 | 1e-121 | |
| 350405899 | 544 | PREDICTED: fatty-acid amide hydrolase 2- | 0.869 | 0.906 | 0.451 | 1e-121 | |
| 357615583 | 547 | hypothetical protein KGM_20790 [Danaus p | 0.938 | 0.972 | 0.440 | 1e-119 |
| >gi|193700076|ref|XP_001946922.1| PREDICTED: fatty-acid amide hydrolase 2-like isoform 1 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
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Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 266/565 (47%), Positives = 366/565 (64%), Gaps = 31/565 (5%)
Query: 5 KRDSPKTISSSRKKQQKRSRRQVACNLLTMFLTFVRSLVDWCIDFVFSFIYEEQ-KFALP 63
+++ K + + + K+S+ CN L ++F+R + D+ + +F ++Y+ LP
Sbjct: 5 RKEKQKKVHLKKTRVPKKSKTSNPCNCLPYVISFIRFIYDFIVSLIFYYVYKNTPSKTLP 64
Query: 64 PVENELLLQSATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQ 123
PV++ L+L S TT+ KIKNK ++C VV+ FI K+IE+
Sbjct: 65 PVDDLLVLDSCTTIVNKIKNKEVTCRHVVECFI----------------------KRIEK 102
Query: 124 VNSKINSVVDNRFSEALEEAKLLDKQIALDEID------FSQKPFLGVPFTSKNSTASKG 177
VN +N+VVD RF +AL EA DK I L + F KP G+PFTSK ST +KG
Sbjct: 103 VNPILNAVVDTRFDKALAEADEYDKLIELANTEEKINLIFDGKPLFGIPFTSKESTGAKG 162
Query: 178 LNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWSETRNMVFGQTNNPYN 237
+ +++GL+ R ++ EDA +V+ LK+AGAILLGVTNVPE+ LW ETRN V+GQTNNPYN
Sbjct: 163 MAWTLGLVSRIGMRSKEDAEVVKSLKTAGAILLGVTNVPEINLWCETRNKVYGQTNNPYN 222
Query: 238 LSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFR 297
+ + GGSSGGE++IVSACGSPLGLG+DIGGS R+P F CG++G+KLTTGFINTKGM FR
Sbjct: 223 TNHSAGGSSGGEASIVSACGSPLGLGSDIGGSARIPAFNCGLFGHKLTTGFINTKGMTFR 282
Query: 298 SGKEARTMVSAGPIVKHAEDILPFIKCLVIPEKLHQLKLDRTHDLKQLKVFYVEQPGDLK 357
G E +TMVSAGPI K+AED+ P IK ++ PEK +LK+ + DL LK +YV++P D +
Sbjct: 283 KGTEKQTMVSAGPITKYAEDLTPAIKAVLGPEKSLELKIGQEVDLSSLKYYYVDKPNDAR 342
Query: 358 VSPVSGEMIGAIRKCVRALDEITEVSAEKLENIKQFKKSYALWRYWMTKEPGNFARDLVN 417
VSP+S E+ + + + ITE+ K++ + SY+LWR+ MTKE +F L N
Sbjct: 343 VSPISDELQIILDHVIEDITSITELPPLKVK-FSGTRYSYSLWRHSMTKEESDFCATLGN 401
Query: 418 QEGEASWWRETIKIFLGMSDHTLPAIMKLIDMHLPLPKDDWAQEQTDKLRKKLTDVLADD 477
+ S W E +K +G S+H+L A++KLID+ LP WA + +KL +++ +L DD
Sbjct: 402 NQTRVSVWSEILKTIVGRSNHSLAAVLKLIDLQLPKVNAVWADAEIEKLSNEISTLLGDD 461
Query: 478 GVLIFPSCPCPATYHYTTFFRPYNFAYWAIFNVLGFPVVNVPVGLSKDGLPLGVQIVATT 537
VL FPS P A H F PYNFAYWAIFNVL PV VP+GL +GLPLG+Q+VA
Sbjct: 462 SVLFFPSSPTTAKRHCEPFLHPYNFAYWAIFNVLKLPVTQVPLGLGLNGLPLGIQVVAGM 521
Query: 538 NNDKLCIDVANYLEKQSVIGWKPPF 562
N D+LC+ VA +LE + GWKPPF
Sbjct: 522 NQDRLCVAVAKHLE-LTFGGWKPPF 545
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Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|242007160|ref|XP_002424410.1| amidotransferase subunit A, putative [Pediculus humanus corporis] gi|212507810|gb|EEB11672.1| amidotransferase subunit A, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
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| >gi|328722970|ref|XP_003247718.1| PREDICTED: fatty-acid amide hydrolase 2-like isoform 2 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
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| >gi|91088991|ref|XP_967443.1| PREDICTED: similar to CG5112 CG5112-PA [Tribolium castaneum] gi|270011545|gb|EFA07993.1| hypothetical protein TcasGA2_TC005582 [Tribolium castaneum] | Back alignment and taxonomy information |
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| >gi|383858864|ref|XP_003704919.1| PREDICTED: fatty-acid amide hydrolase 2-like [Megachile rotundata] | Back alignment and taxonomy information |
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| >gi|332376927|gb|AEE63603.1| unknown [Dendroctonus ponderosae] | Back alignment and taxonomy information |
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| >gi|332023100|gb|EGI63361.1| Fatty-acid amide hydrolase 2 [Acromyrmex echinatior] | Back alignment and taxonomy information |
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| >gi|157115291|ref|XP_001658184.1| amidase [Aedes aegypti] gi|108883507|gb|EAT47732.1| AAEL001173-PA [Aedes aegypti] | Back alignment and taxonomy information |
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| >gi|350405899|ref|XP_003487587.1| PREDICTED: fatty-acid amide hydrolase 2-like [Bombus impatiens] | Back alignment and taxonomy information |
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| >gi|357615583|gb|EHJ69735.1| hypothetical protein KGM_20790 [Danaus plexippus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 567 | ||||||
| FB|FBgn0039341 | 523 | CG5112 [Drosophila melanogaste | 0.901 | 0.977 | 0.407 | 3.9e-99 | |
| UNIPROTKB|Q6GMR7 | 532 | FAAH2 "Fatty-acid amide hydrol | 0.793 | 0.845 | 0.397 | 9.4e-82 | |
| ZFIN|ZDB-GENE-040718-453 | 532 | faah2a "fatty acid amide hydro | 0.779 | 0.830 | 0.401 | 1.5e-81 | |
| ZFIN|ZDB-GENE-061027-358 | 526 | faah2b "fatty acid amide hydro | 0.777 | 0.838 | 0.379 | 1.9e-81 | |
| WB|WBGene00013164 | 535 | Y53F4B.18 [Caenorhabditis eleg | 0.779 | 0.826 | 0.376 | 3.2e-81 | |
| FB|FBgn0033717 | 529 | CG8839 [Drosophila melanogaste | 0.800 | 0.858 | 0.392 | 3.3e-79 | |
| FB|FBgn0038803 | 552 | CG5191 [Drosophila melanogaste | 0.784 | 0.806 | 0.334 | 2e-67 | |
| FB|FBgn0037548 | 536 | CG7900 [Drosophila melanogaste | 0.846 | 0.895 | 0.323 | 1.4e-62 | |
| FB|FBgn0037547 | 530 | CG7910 [Drosophila melanogaste | 0.883 | 0.945 | 0.318 | 1.5e-60 | |
| UNIPROTKB|Q0C2J1 | 454 | HNE_1334 "Amidase family prote | 0.492 | 0.614 | 0.337 | 1.2e-37 |
| FB|FBgn0039341 CG5112 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 984 (351.4 bits), Expect = 3.9e-99, P = 3.9e-99
Identities = 220/540 (40%), Positives = 323/540 (59%)
Query: 30 NLLTMFLTFVRSLVDWCIDFVFSFIYEEQKFALPPVENELLLQSATTVATKIKNKAISCE 89
++L L V L D ++FV + E K P L+ TT+ TK S
Sbjct: 6 HVLDALLALVHILSDRLLEFVLDWYLGEHKRVSGPPS----LEQQTTI-TK------SAV 54
Query: 90 EVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRFSEALEEAKLLDKQ 149
E+ + ++ + R ++ ++IE VN +N+VVD F EAL++A+ +D++
Sbjct: 55 ELAQ--------QIRERRQRSYDIVKAYCERIESVNRDLNAVVDGPFPEALDQAREIDRK 106
Query: 150 IALDEIDFSQK-----PFLGVPFTSKNSTASKGLNFSIGLLKRKDVKGTEDAYIVERLKS 204
LDE ++S + PFLGVPF++K+STA G ++GLL RK + T DA V +K
Sbjct: 107 --LDEKEYSDEDLRRLPFLGVPFSTKDSTAVAGRLHTLGLLARKSERSTTDAECVRLMKE 164
Query: 205 AGAILLGVTNVPELCLWSETRNMVFGQTNNPYNLSRTVGGSSGGESAIVSACGSPLGLGT 264
+GAI++ +NVPE+ W E+RNM+ G TNNPY+L R+VGGSSGGE+A+++AC + GLGT
Sbjct: 165 SGAIIIATSNVPEVNKWIESRNMLIGCTNNPYDLRRSVGGSSGGEAALIAACCTGFGLGT 224
Query: 265 DIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTMVSAGPIVKHAEDILPFIKC 324
DIGGS R+P F CG++G+K T+G +N G FR+GKE TMV AGP+ + A D+LP ++
Sbjct: 225 DIGGSIRIPAFNCGIFGHKPTSGAVNMAGCTFRTGKEKDTMVCAGPMSRSARDLLPMMQV 284
Query: 325 LVIPEKLHQLKLDRTHDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRALDEITEVSA 384
LV P +LKLD+ DLK+L+ FYV G + +P++ E + K + + ++
Sbjct: 285 LVEPSLKAKLKLDQKVDLKRLRYFYVSSNGMAQCNPINRETERVMYKIRKHFEAVSGKDV 344
Query: 385 EKLENIKQFKKSYALWRYWMTKEPGNFARDLVNQEGEASWWRETIKIFLGMSDHTLPAIM 444
+ + K + +WRYWMT+EP NF L+ E + + E K LG SD+++ AI
Sbjct: 345 RHAD-LPYTKLTGKMWRYWMTQEPANFNL-LLGNGAELNPFVELFKKILGQSDYSMAAIY 402
Query: 445 KLIDMHLPLPKDDWAQEQTDKLRKKLTDVLADDGVLIFPSCPCPATYHYTTFFRPYNFAY 504
LID LP K+ +E T K +K + D+L DDGVL F S P A +HY + +FAY
Sbjct: 403 GLIDSVLPKEKEKLMREATAKCKKSVQDLLGDDGVLFFHSSPRTAPFHYYPLVKFNDFAY 462
Query: 505 WAIFNVLGFPVVNVPVGLSKDGLPLGVQIVATTNNDKLCIDVANYLEKQSVIGWKPPFNL 564
+++FNVL P VP+GL G+PLG+Q+VA NND+LC+ VA LE+ + GW PPF L
Sbjct: 463 FSLFNVLHLPATQVPMGLDSKGMPLGIQVVANPNNDRLCLAVAEELER-TFGGWVPPFPL 521
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| UNIPROTKB|Q6GMR7 FAAH2 "Fatty-acid amide hydrolase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-040718-453 faah2a "fatty acid amide hydrolase 2a" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-061027-358 faah2b "fatty acid amide hydrolase 2b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| WB|WBGene00013164 Y53F4B.18 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0033717 CG8839 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0038803 CG5191 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0037548 CG7900 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0037547 CG7910 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q0C2J1 HNE_1334 "Amidase family protein" [Hyphomonas neptunium ATCC 15444 (taxid:228405)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q6DH69 | FAH2A_DANRE | 3, ., 5, ., 1, ., 9, 9 | 0.3836 | 0.8871 | 0.9454 | yes | N/A |
| Q6GMR7 | FAAH2_HUMAN | 3, ., 5, ., 1, ., 9, 9 | 0.3789 | 0.8342 | 0.8890 | yes | N/A |
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.5.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 567 | |||
| pfam01425 | 431 | pfam01425, Amidase, Amidase | 2e-79 | |
| COG0154 | 475 | COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransf | 4e-76 | |
| PRK06170 | 490 | PRK06170, PRK06170, amidase; Provisional | 4e-55 | |
| PRK07487 | 469 | PRK07487, PRK07487, amidase; Provisional | 7e-43 | |
| TIGR00132 | 460 | TIGR00132, gatA, aspartyl/glutamyl-tRNA(Asn/Gln) a | 1e-39 | |
| PRK07486 | 484 | PRK07486, PRK07486, amidase; Provisional | 4e-36 | |
| PRK00012 | 459 | PRK00012, gatA, aspartyl/glutamyl-tRNA amidotransf | 1e-34 | |
| PRK06529 | 482 | PRK06529, PRK06529, amidase; Provisional | 8e-34 | |
| PRK12470 | 462 | PRK12470, PRK12470, amidase; Provisional | 6e-31 | |
| PRK07488 | 472 | PRK07488, PRK07488, indole acetimide hydrolase; Va | 6e-30 | |
| PRK09201 | 465 | PRK09201, PRK09201, amidase; Provisional | 4e-28 | |
| PRK06169 | 466 | PRK06169, PRK06169, putative amidase; Provisional | 7e-28 | |
| TIGR02715 | 452 | TIGR02715, amido_AtzE, amidohydrolase, AtzE family | 4e-27 | |
| PRK07042 | 464 | PRK07042, PRK07042, amidase; Provisional | 2e-26 | |
| PRK06061 | 483 | PRK06061, PRK06061, amidase; Provisional | 3e-25 | |
| PRK08137 | 497 | PRK08137, PRK08137, amidase; Provisional | 4e-22 | |
| PRK06707 | 536 | PRK06707, PRK06707, amidase; Provisional | 8e-20 | |
| PLN02722 | 422 | PLN02722, PLN02722, indole-3-acetamide amidohydrol | 2e-18 | |
| PRK07869 | 468 | PRK07869, PRK07869, amidase; Provisional | 1e-17 | |
| PRK07235 | 502 | PRK07235, PRK07235, amidase; Provisional | 8e-17 | |
| PRK06828 | 491 | PRK06828, PRK06828, amidase; Provisional | 2e-16 | |
| PRK06565 | 566 | PRK06565, PRK06565, amidase; Validated | 4e-16 | |
| PRK07056 | 454 | PRK07056, PRK07056, amidase; Provisional | 4e-14 | |
| PRK08186 | 600 | PRK08186, PRK08186, allophanate hydrolase; Provisi | 4e-14 | |
| TIGR02713 | 561 | TIGR02713, allophanate_hyd, allophanate hydrolase | 5e-14 | |
| PRK11910 | 615 | PRK11910, PRK11910, amidase; Provisional | 6e-14 | |
| PRK08310 | 395 | PRK08310, PRK08310, amidase; Provisional | 9e-14 | |
| PRK05962 | 424 | PRK05962, PRK05962, amidase; Validated | 2e-13 | |
| PRK06102 | 452 | PRK06102, PRK06102, hypothetical protein; Provisio | 6e-13 | |
| PRK07139 | 439 | PRK07139, PRK07139, amidase; Provisional | 4e-12 | |
| PRK06061 | 483 | PRK06061, PRK06061, amidase; Provisional | 2e-09 | |
| PRK09201 | 465 | PRK09201, PRK09201, amidase; Provisional | 2e-07 | |
| TIGR02715 | 452 | TIGR02715, amido_AtzE, amidohydrolase, AtzE family | 1e-06 | |
| PRK00012 | 459 | PRK00012, gatA, aspartyl/glutamyl-tRNA amidotransf | 6e-05 | |
| PRK12470 | 462 | PRK12470, PRK12470, amidase; Provisional | 1e-04 | |
| TIGR02713 | 561 | TIGR02713, allophanate_hyd, allophanate hydrolase | 4e-04 | |
| PRK08310 | 395 | PRK08310, PRK08310, amidase; Provisional | 4e-04 | |
| PRK07235 | 502 | PRK07235, PRK07235, amidase; Provisional | 0.002 | |
| PRK07486 | 484 | PRK07486, PRK07486, amidase; Provisional | 0.004 |
| >gnl|CDD|216494 pfam01425, Amidase, Amidase | Back alignment and domain information |
|---|
Score = 256 bits (655), Expect = 2e-79
Identities = 130/461 (28%), Positives = 206/461 (44%), Gaps = 64/461 (13%)
Query: 115 QSLVKKIEQVNSKINSVVDNRFSEALEEAKLLDKQIALDEIDFSQKPFLGVPFTSKNSTA 174
++ + + E N K+N+ V F EAL +AK DK+ A E P GVP + K++
Sbjct: 4 EAYLDRAEAANPKLNAFVTVFFEEALAQAKAADKRRARKEK----GPLHGVPISLKDNID 59
Query: 175 SKGLNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWSETRNMVFGQTNN 234
KG+ + G + DA +VERL++AGA++LG TN+ E + S T N FG T N
Sbjct: 60 VKGVPTTAGSKALEGYPPPYDATVVERLRAAGAVILGKTNMDEFAMGSTTENSAFGPTRN 119
Query: 235 PYNLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGM 294
P++LSRT GGSSGG +A V+A PL +GTD GGS R+P +CG+ G K T G ++ G+
Sbjct: 120 PWDLSRTPGGSSGGSAAAVAAGLVPLAIGTDTGGSIRIPAAFCGLVGLKPTYGRVSRYGV 179
Query: 295 GFRSGKEARTMVSAGPIVKHAEDILPFIKCLV---------IPEKLHQLKLDRTHDLKQL 345
S ++ GP+ + ED + + P + LK L
Sbjct: 180 VPYS----SSLDHVGPLARTVEDAALLLDVIAGYDPADPTSAPSPVPDFAEPLKKSLKGL 235
Query: 346 KVFYVEQPGDLKVSPVSGEMIGAIRKCVRALD----EITEVSAEKLENIKQFKKSYALWR 401
++ + + P E+ A+RK AL+ E+ EV L++ L+
Sbjct: 236 RIGVPREDFYFSLDP---EVQRAVRKAAAALEALGHEVVEVEPPSLKHA------LPLYY 286
Query: 402 YWMTKEPGNFARDLVNQEGEASWWRETIKIFLGMSDHTLPAIMK--LIDMHLPLPKDD-- 457
E + DL +++ + D L +K + L
Sbjct: 287 IIAPAEASSNLSDL-------------DELYPRIRDELLGDEVKRRIELGAYALSAGYSG 333
Query: 458 ----WAQEQTDKLRKKLTDVLADDGVLIFPSCPCPA------TYHYTTFFRPYNFAYW-- 505
AQ+ LR++ + + VL+ P+ P PA T YN +
Sbjct: 334 AYYLKAQKVRRLLRREFAGLFEELDVLLSPTTPTPAPRLGEAADSPTV---LYNLLDFTA 390
Query: 506 --AIFNVLGFPVVNVPVGLSKDGLPLGVQIVATTNNDKLCI 544
N+ G P +++P G S+DGLP+G+QI+ +D+ +
Sbjct: 391 NTVPANLAGLPAISLPAGFSEDGLPVGLQIIGPPGDDETLL 431
|
Length = 431 |
| >gnl|CDD|223232 COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >gnl|CDD|235723 PRK06170, PRK06170, amidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236029 PRK07487, PRK07487, amidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|232842 TIGR00132, gatA, aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit | Back alignment and domain information |
|---|
| >gnl|CDD|236028 PRK07486, PRK07486, amidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|234572 PRK00012, gatA, aspartyl/glutamyl-tRNA amidotransferase subunit A; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|180608 PRK06529, PRK06529, amidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|171524 PRK12470, PRK12470, amidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236030 PRK07488, PRK07488, indole acetimide hydrolase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|236409 PRK09201, PRK09201, amidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|180437 PRK06169, PRK06169, putative amidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233982 TIGR02715, amido_AtzE, amidohydrolase, AtzE family | Back alignment and domain information |
|---|
| >gnl|CDD|235915 PRK07042, PRK07042, amidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235686 PRK06061, PRK06061, amidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236161 PRK08137, PRK08137, amidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235855 PRK06707, PRK06707, amidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|166363 PLN02722, PLN02722, indole-3-acetamide amidohydrolase | Back alignment and domain information |
|---|
| >gnl|CDD|181154 PRK07869, PRK07869, amidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235979 PRK07235, PRK07235, amidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|180715 PRK06828, PRK06828, amidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|180626 PRK06565, PRK06565, amidase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|235921 PRK07056, PRK07056, amidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236177 PRK08186, PRK08186, allophanate hydrolase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233981 TIGR02713, allophanate_hyd, allophanate hydrolase | Back alignment and domain information |
|---|
| >gnl|CDD|183377 PRK11910, PRK11910, amidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|181375 PRK08310, PRK08310, amidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|168315 PRK05962, PRK05962, amidase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|235698 PRK06102, PRK06102, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235945 PRK07139, PRK07139, amidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235686 PRK06061, PRK06061, amidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236409 PRK09201, PRK09201, amidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233982 TIGR02715, amido_AtzE, amidohydrolase, AtzE family | Back alignment and domain information |
|---|
| >gnl|CDD|234572 PRK00012, gatA, aspartyl/glutamyl-tRNA amidotransferase subunit A; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|171524 PRK12470, PRK12470, amidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233981 TIGR02713, allophanate_hyd, allophanate hydrolase | Back alignment and domain information |
|---|
| >gnl|CDD|181375 PRK08310, PRK08310, amidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235979 PRK07235, PRK07235, amidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236028 PRK07486, PRK07486, amidase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 567 | |||
| PRK06170 | 490 | amidase; Provisional | 100.0 | |
| KOG1212|consensus | 560 | 100.0 | ||
| PRK07042 | 464 | amidase; Provisional | 100.0 | |
| PRK06169 | 466 | putative amidase; Provisional | 100.0 | |
| PRK07487 | 469 | amidase; Provisional | 100.0 | |
| COG0154 | 475 | GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A su | 100.0 | |
| PRK07486 | 484 | amidase; Provisional | 100.0 | |
| PRK07488 | 472 | indole acetimide hydrolase; Validated | 100.0 | |
| TIGR02715 | 452 | amido_AtzE amidohydrolase, AtzE family. Members of | 100.0 | |
| PRK09201 | 465 | amidase; Provisional | 100.0 | |
| PRK07056 | 454 | amidase; Provisional | 100.0 | |
| PRK06102 | 452 | hypothetical protein; Provisional | 100.0 | |
| PRK08137 | 497 | amidase; Provisional | 100.0 | |
| PRK06061 | 483 | amidase; Provisional | 100.0 | |
| TIGR00132 | 460 | gatA glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) | 100.0 | |
| PRK12470 | 462 | amidase; Provisional | 100.0 | |
| PRK00012 | 459 | gatA aspartyl/glutamyl-tRNA amidotransferase subun | 100.0 | |
| PRK07869 | 468 | amidase; Provisional | 100.0 | |
| PRK06529 | 482 | amidase; Provisional | 100.0 | |
| PRK08186 | 600 | allophanate hydrolase; Provisional | 100.0 | |
| PRK05962 | 424 | amidase; Validated | 100.0 | |
| PRK06828 | 491 | amidase; Provisional | 100.0 | |
| PRK07235 | 502 | amidase; Provisional | 100.0 | |
| PRK11910 | 615 | amidase; Provisional | 100.0 | |
| PF01425 | 441 | Amidase: Amidase; InterPro: IPR000120 Amidase sign | 100.0 | |
| PRK06707 | 536 | amidase; Provisional | 100.0 | |
| PRK06565 | 566 | amidase; Validated | 100.0 | |
| TIGR02713 | 561 | allophanate_hyd allophanate hydrolase. Allophanate | 100.0 | |
| PRK07139 | 439 | amidase; Provisional | 100.0 | |
| PRK08310 | 395 | amidase; Provisional | 100.0 | |
| PLN02722 | 422 | indole-3-acetamide amidohydrolase | 100.0 | |
| KOG1211|consensus | 506 | 100.0 | ||
| KOG1212|consensus | 560 | 93.93 |
| >PRK06170 amidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-97 Score=812.26 Aligned_cols=452 Identities=29% Similarity=0.434 Sum_probs=378.2
Q ss_pred hhhhhccCHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHcCcccEEEeCChHHHHHHHHH
Q psy15609 66 ENELLLQSATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRFSEALEEAKL 145 (567)
Q Consensus 66 ~~~i~~~s~~~l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n~~lna~v~~~~~~Al~~A~~ 145 (567)
.+++..+|+.+|+++|++|++|++||+++||+|| +++|+.+|||++.++++|+++|++
T Consensus 6 ~~~~~~~s~~~l~~~~~~g~~t~~ev~~~~l~ri----------------------~~~~~~lna~~~~~~e~al~~A~~ 63 (490)
T PRK06170 6 ADEWSFLPATELAAALAAGEVSSVELTDLAIARI----------------------ERHDGKINAIVVRDFDRARAAARA 63 (490)
T ss_pred cchhhhcCHHHHHHHHHcCCCCHHHHHHHHHHHH----------------------HHhCCCcCEEEECCHHHHHHHHHH
Confidence 3567888999999999999999999999999999 999999999999999999999999
Q ss_pred hhHHHHcCCCCCCCCCcccceEEeecCcCCCCCcCCCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccCCCCC
Q psy15609 146 LDKQIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWSETR 225 (567)
Q Consensus 146 ~D~~~~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~ 225 (567)
+|+++++| ..+|||||||+|||+|+++|++||+||..++++++.+||++|++||+||||++||||||||+++.++.
T Consensus 64 ~d~~~~~g----~~gpL~GvPv~VKD~~~v~G~~tt~Gs~~~~~~~~~~da~vV~rLr~aGAii~GKTn~~E~~~~~~~~ 139 (490)
T PRK06170 64 ADAARARG----ERGPLLGIPVTVKESFNVAGLPTTWGFPDLRDYVPAEDAVAVARLKAAGAVILGKTNVPLGLQDWQSY 139 (490)
T ss_pred HHHHHhcC----CCCCcCCceEEEecccccCCcccCCCChhhcCCCCCccHHHHHHHHHCCCEEEEecCChhhccCCCcc
Confidence 99998876 35999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCC---CCC
Q psy15609 226 NMVFGQTNNPYNLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSG---KEA 302 (567)
Q Consensus 226 n~~~G~t~NP~~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~---~~~ 302 (567)
|.+||+|+||||+.|+||||||||||+||+|++++|+|||||||||+||+||||||||||+|+||+.|++|.+. ...
T Consensus 140 n~~~G~t~NP~~~~~~~GGSSgGsAaAVAaG~~~~alGtDtgGSiRiPAa~cGvvG~KPT~Grv~~~G~~~~~~~~~~~~ 219 (490)
T PRK06170 140 NEIYGTTNNPWDLARTPGGSSGGSAAALAAGFGALSIGSDIGGSLRVPAHYCGVYAHKPTLGLVPLRGHIPPPAPALPGQ 219 (490)
T ss_pred CCCCCCCCCCCCCCCCCCCChHHHHHHHHcCCCceeeecCCCCccccChHHhCceeecCCCCcCcCCCcCCccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998210 112
Q ss_pred CCcceeccccCCHhhHHHHHHHhcCCcccCcC---cccc----cCCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHH
Q psy15609 303 RTMVSAGPIVKHAEDILPFIKCLVIPEKLHQL---KLDR----THDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRA 375 (567)
Q Consensus 303 ~~~~~~GpmaR~v~Dl~~ll~v~ag~~p~~~~---~l~~----~~~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~ 375 (567)
.++|++|||||+|+|+++++++|+|+++.++. .... ..+++++||||+.+++ ...++++++++++++++.
T Consensus 220 ~~~d~~Gp~arsv~D~a~~l~~l~g~d~~d~~~~~~~~~~~~~~~~~~~lrig~~~~~~---~~~~~~~v~~a~~~a~~~ 296 (490)
T PRK06170 220 ADLAVAGPMARSARDLALLLDVMAGPDPLDGGVAYRLALPPARHGRLKDFRVLVLDEHP---LLPTDAAVRAAIERLAAA 296 (490)
T ss_pred cccccccCccCCHHHHHHHHHHHhCCCccccccccccCCCcccccccCCCEEEEECCcC---CCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999998755521 1111 1246789999997643 457899999999999999
Q ss_pred hhhcCCcEEEEecC--ccchHHHHHHHHHHHhccCc-chhHHhhhcccccchHHHHHHHHhCCC---CCchHHHHHHHH-
Q psy15609 376 LDEITEVSAEKLEN--IKQFKKSYALWRYWMTKEPG-NFARDLVNQEGEASWWRETIKIFLGMS---DHTLPAIMKLID- 448 (567)
Q Consensus 376 L~~~lG~~V~ev~~--lp~~~~~~~~~~~~~~~e~~-~~~~~l~~~~~~~~~~~el~k~~~~~s---~~~~~~~~~l~~- 448 (567)
|+++ |++|+++ + ++.+.+....+...+..+.. .+.. +......... ....+.+...+.
T Consensus 297 L~~~-G~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (490)
T PRK06170 297 LADA-GARVVRH-SPLLPDLAESARLYMRLLFAASAARFPP-------------DAYADAQARAAGLSADDRSLAAERLR 361 (490)
T ss_pred HHHC-CCEEEEc-CCCCCchHHHHHHHHHHHHHHHhhccch-------------hHHHHhhhccccccchhHHHHHHHhc
Confidence 9996 9999988 6 45555555544333322110 0100 0001111000 011122222222
Q ss_pred -hCCChHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCCCCCCCcccc----------C----CCCcchhHhhHhhCC
Q psy15609 449 -MHLPLPKDDWAQEQTDKLRKKLTDVLADDGVLIFPSCPCPATYHYTTFF----------R----PYNFAYWAIFNVLGF 513 (567)
Q Consensus 449 -~~~s~~~~~~a~~~r~~l~~~~~~ll~~~dvLL~Pt~p~~Ap~~~~~~~----------~----~~~~~yT~l~NllGl 513 (567)
..++..+|.++++.|+.++++|.++|+++|+||+||+|.+||.++.... . ...+.||.+||++|+
T Consensus 362 g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~G~ 441 (490)
T PRK06170 362 GAVLSHRDWLFADAAREELRAAWRRFFAEFDVVLCPVTPTPAFPHDHAPDPLERRIDIDGVSYPYWDQLVWAGLATLPGL 441 (490)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEEeCCCCCCCCCCCccccccccccccCCcccchhhhhhhcceecccCC
Confidence 5678899999999999999999999999999999999999999864210 0 011358899999999
Q ss_pred CeEEEcCCCCCCCCceEEEEEcCCCChHHHHHHHHHHHHhhcCCCCCCC
Q psy15609 514 PVVNVPVGLSKDGLPLGVQIVATTNNDKLCIDVANYLEKQSVIGWKPPF 562 (567)
Q Consensus 514 PaisVP~G~~~~GLPvGvQvVg~~~~D~~lLavA~~lE~~~~~gw~~p~ 562 (567)
|+++||+|++.+|||+||||||++|+|++||++|++||+. +++|++|+
T Consensus 442 PaisvP~g~~~~GlPvGlQlig~~~~D~~LL~~a~~lE~~-~~~~~~~~ 489 (490)
T PRK06170 442 PATAIPIGLSATGLPVGVQIVGPALEDRTPLRLAELLEEE-FGGFRPPP 489 (490)
T ss_pred CeEEEECCcCCCCCceeEEEecCCCCHHHHHHHHHHHHHh-cCCCCCCC
Confidence 9999999998899999999999999999999999999999 99997554
|
|
| >KOG1212|consensus | Back alignment and domain information |
|---|
| >PRK07042 amidase; Provisional | Back alignment and domain information |
|---|
| >PRK06169 putative amidase; Provisional | Back alignment and domain information |
|---|
| >PRK07487 amidase; Provisional | Back alignment and domain information |
|---|
| >COG0154 GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PRK07486 amidase; Provisional | Back alignment and domain information |
|---|
| >PRK07488 indole acetimide hydrolase; Validated | Back alignment and domain information |
|---|
| >TIGR02715 amido_AtzE amidohydrolase, AtzE family | Back alignment and domain information |
|---|
| >PRK09201 amidase; Provisional | Back alignment and domain information |
|---|
| >PRK07056 amidase; Provisional | Back alignment and domain information |
|---|
| >PRK06102 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK08137 amidase; Provisional | Back alignment and domain information |
|---|
| >PRK06061 amidase; Provisional | Back alignment and domain information |
|---|
| >TIGR00132 gatA glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit | Back alignment and domain information |
|---|
| >PRK12470 amidase; Provisional | Back alignment and domain information |
|---|
| >PRK00012 gatA aspartyl/glutamyl-tRNA amidotransferase subunit A; Reviewed | Back alignment and domain information |
|---|
| >PRK07869 amidase; Provisional | Back alignment and domain information |
|---|
| >PRK06529 amidase; Provisional | Back alignment and domain information |
|---|
| >PRK08186 allophanate hydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK05962 amidase; Validated | Back alignment and domain information |
|---|
| >PRK06828 amidase; Provisional | Back alignment and domain information |
|---|
| >PRK07235 amidase; Provisional | Back alignment and domain information |
|---|
| >PRK11910 amidase; Provisional | Back alignment and domain information |
|---|
| >PF01425 Amidase: Amidase; InterPro: IPR000120 Amidase signature (AS) enzymes are a large group of hydrolytic enzymes that contain a conserved stretch of approximately 130 amino acids known as the AS sequence | Back alignment and domain information |
|---|
| >PRK06707 amidase; Provisional | Back alignment and domain information |
|---|
| >PRK06565 amidase; Validated | Back alignment and domain information |
|---|
| >TIGR02713 allophanate_hyd allophanate hydrolase | Back alignment and domain information |
|---|
| >PRK07139 amidase; Provisional | Back alignment and domain information |
|---|
| >PRK08310 amidase; Provisional | Back alignment and domain information |
|---|
| >PLN02722 indole-3-acetamide amidohydrolase | Back alignment and domain information |
|---|
| >KOG1211|consensus | Back alignment and domain information |
|---|
| >KOG1212|consensus | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 567 | ||||
| 3h0l_A | 478 | Structure Of Trna-Dependent Amidotransferase Gatcab | 2e-20 | ||
| 2dc0_A | 434 | Crystal Structure Of Amidase Length = 434 | 4e-19 | ||
| 3al0_A | 475 | Crystal Structure Of The Glutamine Transamidosome F | 5e-19 | ||
| 3kfu_E | 471 | Crystal Structure Of The Transamidosome Length = 47 | 6e-19 | ||
| 3a2p_A | 493 | Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolas | 6e-19 | ||
| 3a2p_A | 493 | Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolas | 7e-07 | ||
| 3a2q_A | 493 | Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolas | 1e-18 | ||
| 3a2q_A | 493 | Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolas | 7e-07 | ||
| 2gi3_A | 476 | Crystal Structure Of Glutamyl-Trna(Gln) Amidotransf | 3e-17 | ||
| 2df4_A | 485 | Structure Of Trna-Dependent Amidotransferase Gatcab | 6e-16 | ||
| 1m21_A | 503 | Crystal Structure Analysis Of The Peptide Amidase P | 1e-14 | ||
| 4hbp_A | 550 | Crystal Structure Of Faah In Complex With Inhibitor | 7e-14 | ||
| 1mt5_A | 537 | Crystal Structure Of Fatty Acid Amide Hydrolase Len | 8e-14 | ||
| 4do3_A | 571 | Structure Of Faah With A Non-steroidal Anti-inflamm | 1e-13 | ||
| 3qk5_A | 587 | Crystal Structure Of Fatty Acid Amide Hydrolase Wit | 2e-13 | ||
| 2wap_A | 543 | 3d-Crystal Structure Of Humanized-Rat Fatty Acid Am | 2e-13 | ||
| 2wj1_A | 573 | 3d-Crystal Structure Of Humanized-Rat Fatty Acid Am | 2e-13 | ||
| 2vya_A | 587 | Crystal Structure Of Fatty Acid Amide Hydrolase Con | 3e-13 | ||
| 3a1k_A | 521 | Crystal Structure Of Rhodococcus Sp. N771 Amidase L | 3e-11 | ||
| 3a1i_A | 521 | Crystal Structure Of Rhodococcus Sp. N-771 Amidase | 6e-11 | ||
| 1obk_A | 414 | Crystal Structure Of The R158q Mutant Of Malonamida | 5e-09 | ||
| 1o9n_A | 414 | Crystal Structure Of The K62a Mutant Of Malonamidas | 6e-09 | ||
| 1obl_A | 414 | Crystal Structure Of The S133a Mutant Of Malonamida | 6e-09 | ||
| 1o9o_A | 414 | Crystal Structure Of The S131a Mutant Of Malonamida | 6e-09 | ||
| 1ock_A | 412 | The Crystal Structure Of Malonamidase E2 From Brady | 7e-09 | ||
| 4gyr_A | 621 | Granulibacter Bethesdensis Allophanate Hydrolase Ap | 9e-09 | ||
| 1obi_A | 414 | Crystal Structure Of The G130a Mutant Of Malonamida | 9e-09 | ||
| 1o9q_A | 414 | Crystal Structure Of The S155c Mutant Of Malonamida | 2e-08 | ||
| 1obj_A | 414 | Crystal Structure Of The T150a Mutant Of Malonamida | 2e-08 |
| >pdb|3H0L|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus Length = 478 | Back alignment and structure |
|
| >pdb|2DC0|A Chain A, Crystal Structure Of Amidase Length = 434 | Back alignment and structure |
| >pdb|3AL0|A Chain A, Crystal Structure Of The Glutamine Transamidosome From Thermotoga Maritima In The Glutamylation State Length = 475 | Back alignment and structure |
| >pdb|3KFU|E Chain E, Crystal Structure Of The Transamidosome Length = 471 | Back alignment and structure |
| >pdb|3A2P|A Chain A, Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolase Length = 493 | Back alignment and structure |
| >pdb|3A2P|A Chain A, Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolase Length = 493 | Back alignment and structure |
| >pdb|3A2Q|A Chain A, Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolase Complexed With Substrate Length = 493 | Back alignment and structure |
| >pdb|3A2Q|A Chain A, Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolase Complexed With Substrate Length = 493 | Back alignment and structure |
| >pdb|2GI3|A Chain A, Crystal Structure Of Glutamyl-Trna(Gln) Amidotransferase Subunit A (Tm1272) From Thermotoga Maritima At 1.80 A Resolution Length = 476 | Back alignment and structure |
| >pdb|2DF4|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab Complexed With Mn2+ Length = 485 | Back alignment and structure |
| >pdb|1M21|A Chain A, Crystal Structure Analysis Of The Peptide Amidase Pam In Complex With The Competitive Inhibitor Chymostatin Length = 503 | Back alignment and structure |
| >pdb|4HBP|A Chain A, Crystal Structure Of Faah In Complex With Inhibitor Length = 550 | Back alignment and structure |
| >pdb|1MT5|A Chain A, Crystal Structure Of Fatty Acid Amide Hydrolase Length = 537 | Back alignment and structure |
| >pdb|4DO3|A Chain A, Structure Of Faah With A Non-steroidal Anti-inflammatory Drug Length = 571 | Back alignment and structure |
| >pdb|3QK5|A Chain A, Crystal Structure Of Fatty Acid Amide Hydrolase With Small Molecule Inhibitor Length = 587 | Back alignment and structure |
| >pdb|2WAP|A Chain A, 3d-Crystal Structure Of Humanized-Rat Fatty Acid Amide Hydrolase (Faah) Conjugated With The Drug-Like Urea Inhibitor Pf-3845 Length = 543 | Back alignment and structure |
| >pdb|2WJ1|A Chain A, 3d-Crystal Structure Of Humanized-Rat Fatty Acid Amide Hydrolase (Faah) Conjugated With 7-Phenyl-1-(4-(Pyridin-2- Yl)oxazol-2-Yl)heptan-1-One, An Alpha-Ketooxazole Length = 573 | Back alignment and structure |
| >pdb|2VYA|A Chain A, Crystal Structure Of Fatty Acid Amide Hydrolase Conjugated With The Drug-Like Inhibitor Pf-750 Length = 587 | Back alignment and structure |
| >pdb|3A1K|A Chain A, Crystal Structure Of Rhodococcus Sp. N771 Amidase Length = 521 | Back alignment and structure |
| >pdb|3A1I|A Chain A, Crystal Structure Of Rhodococcus Sp. N-771 Amidase Complexed With Benzamide Length = 521 | Back alignment and structure |
| >pdb|1OBK|A Chain A, Crystal Structure Of The R158q Mutant Of Malonamidase E2 From Bradyrhizobium Japonicum Length = 414 | Back alignment and structure |
| >pdb|1O9N|A Chain A, Crystal Structure Of The K62a Mutant Of Malonamidase E2 From Bradyrhizobium Japonicum Length = 414 | Back alignment and structure |
| >pdb|1OBL|A Chain A, Crystal Structure Of The S133a Mutant Of Malonamidase E2 Complexed With Malonate From Bradyrhizobium Japonicum Length = 414 | Back alignment and structure |
| >pdb|1O9O|A Chain A, Crystal Structure Of The S131a Mutant Of Malonamidase E2 Complexed With Malonamate From Bradyrhizobium Japonicum Length = 414 | Back alignment and structure |
| >pdb|1OCK|A Chain A, The Crystal Structure Of Malonamidase E2 From Bradyrhizobium Japonicum Length = 412 | Back alignment and structure |
| >pdb|4GYR|A Chain A, Granulibacter Bethesdensis Allophanate Hydrolase Apo Length = 621 | Back alignment and structure |
| >pdb|1OBI|A Chain A, Crystal Structure Of The G130a Mutant Of Malonamidase E2 From Bradyrhizobium Japonicum Length = 414 | Back alignment and structure |
| >pdb|1O9Q|A Chain A, Crystal Structure Of The S155c Mutant Of Malonamidase E2 From Bradyrhizobium Japonicum Length = 414 | Back alignment and structure |
| >pdb|1OBJ|A Chain A, Crystal Structure Of The T150a Mutant Of Malonamidase E2 From Bradyrhizobium Japonicum Length = 414 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3ppm_A Fatty-acid amide hydrolase 1; protein-inhibitor complex, FAAH, oxazole, oxadiazole, endoca degradation, membrane protein; HET: JG1 1DO; 1.78A {Rattus norvegicus} PDB: 2wj2_A* 3k7f_A* 3k83_A* 3k84_A* 3lj6_A* 3lj7_A 3oj8_A* 2wj1_A* 3pr0_A* 2wap_A* 1mt5_A* 2vya_A* 3qk5_A* 3qj8_A* 3qj9_A* 3qkv_A* Length = 573 | Back alignment and structure |
|---|
Score = 346 bits (889), Expect = e-112
Identities = 123/594 (20%), Positives = 212/594 (35%), Gaps = 98/594 (16%)
Query: 19 QQKRSRRQVACNLLTMFLTFVRSLVDWCIDFVFSFIYEEQKFALPPVENELLLQSATTVA 78
++ R A R ++ + + + LL +
Sbjct: 26 TGRQKARGAATR--------ARQKQRASLETMDKAVQRFRLQNPDLDSEALLTLPLLQLV 77
Query: 79 TKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRFSE 138
K+++ +S E V ++ + +VN N V
Sbjct: 78 QKLQSGELSPEAVFFTYLGKA----------------------WEVNKGTNCVTSYLTDC 115
Query: 139 ALEEAKLLDKQIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKGTEDAYI 198
+ ++ + GVP + K + KG + ++GL + + D +
Sbjct: 116 ETQLSQAPRQ-----------GLLYGVPVSLKECFSYKGHDSTLGLSLNEGMPSESDCVV 164
Query: 199 VERLKSAGAILLGVTNVPELCLWSETRNMVFGQTNNPYNLSRTVGGSSGGESAIVSACGS 258
V+ LK GA+ TNVP+ + N +FGQT NP+ S++ GGSSGGE A++ + GS
Sbjct: 165 VQVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGS 224
Query: 259 PLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGM-GFRSGKEARTMVSAGPIVKHAED 317
PLGLGTDIGGS R P +CG+ G K T ++ G+ G G+ A +S GP+ + E
Sbjct: 225 PLGLGTDIGGSIRFPSAFCGICGLKPTGNRLSKSGLKGCVYGQTA-VQLSLGPMARDVES 283
Query: 318 ILPFIKCLVIPEKLHQ--------LKLDRTHDLKQLKVFYVEQPGDLKVSPVSGEMIGAI 369
+ +K L+ + + + L+V Y E SP M A+
Sbjct: 284 LALCLKALLCEHLFTLDPTVPPLPFREEVYRSSRPLRVGYYETDNYTMPSP---AMRRAL 340
Query: 370 RKCVRALD----EITEVSAEKLENIKQFKKSYALW----RYWMTKEPGNFARDLVNQEGE 421
+ + L+ + + + + L+ R ++ G+F +
Sbjct: 341 IETKQRLEAAGHTLIPFLPNNIPYALEVLSTGGLFSDGGRSFLQNFKGDFVDPCLGDLIL 400
Query: 422 ASWWRETIKIFLGMSDHTL-PAIMKLIDMHLPLPKDDW--AQEQTDKLRKKLTDVLADDG 478
K L + L P + ++ P + Q + + R+ +
Sbjct: 401 ILRLPSWFKRLLSLLLKPLFPRLAAFLNNMRPRSAEKLWKLQHEIEMYRQSVIAQWKAMN 460
Query: 479 V--LIFPSCPCPATYHYTTFFRPYNFAYWAIFNVLGFPVVNVPVGL-------------- 522
+ L+ P PA T +Y ++N L FP VPV
Sbjct: 461 LDVLLTPMLG-PALDLNTPGRATGAVSYTMLYNCLDFPAGVVPVTTVTAEDDAQMELYKG 519
Query: 523 ---------------SKDGLPLGVQIVATTNNDKLCIDVANYLEKQSVIGWKPP 561
+ GLP+ VQ VA ++LC+ +E Q + K P
Sbjct: 520 YFGDIWDIILKKAMKNSVGLPVAVQCVALPWQEELCLRFMREVE-QLMTPQKQP 572
|
| >3a2q_A 6-aminohexanoate-cyclic-dimer hydrolase; alpha/beta fold, nylon degradation; 1.80A {Arthrobacter SP} PDB: 3a2p_A Length = 493 | Back alignment and structure |
|---|
| >1o9p_A Malonamidase E2; malonate; 1.8A {Bradyrhizobium japonicum} SCOP: c.117.1.1 PDB: 1o9o_A 1obl_A 1och_A 1obk_A 1obi_A 1o9q_A* 1obj_A 1o9n_A 1ock_A 1ocl_A 1ocm_A Length = 414 | Back alignment and structure |
|---|
| >3ip4_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} PDB: 2df4_A 2dqn_A* 2g5h_A 2g5i_A* 2f2a_A Length = 485 | Back alignment and structure |
|---|
| >1m22_A Peptide amidase, PAM; eleven-stranded beta sheet, covered double layers of alpha helices on TOP and bottom, hydrolase; HET: EPE; 1.40A {Stenotrophomonas maltophilia} SCOP: c.117.1.1 PDB: 1m21_A* Length = 503 | Back alignment and structure |
|---|
| >1m22_A Peptide amidase, PAM; eleven-stranded beta sheet, covered double layers of alpha helices on TOP and bottom, hydrolase; HET: EPE; 1.40A {Stenotrophomonas maltophilia} SCOP: c.117.1.1 PDB: 1m21_A* Length = 503 | Back alignment and structure |
|---|
| >2dc0_A Probable amidase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus} Length = 434 | Back alignment and structure |
|---|
| >2dc0_A Probable amidase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus} Length = 434 | Back alignment and structure |
|---|
| >3h0l_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_A 3h0r_A* Length = 478 | Back alignment and structure |
|---|
| >3kfu_E Glutamyl-tRNA(Gln) amidotransferase subunit A; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus} Length = 471 | Back alignment and structure |
|---|
| >2gi3_A Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1272, structural genomics, joint center for structura genomics, JCSG; HET: MSE MPD; 1.80A {Thermotoga maritima} SCOP: c.117.1.1 PDB: 3al0_A* Length = 476 | Back alignment and structure |
|---|
| >3a1k_A Amidase; AS family enzyme, hydrolase; 2.17A {Rhodococcus SP} PDB: 3a1i_A Length = 521 | Back alignment and structure |
|---|
| >3a1k_A Amidase; AS family enzyme, hydrolase; 2.17A {Rhodococcus SP} PDB: 3a1i_A Length = 521 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 567 | |||
| 3ip4_A | 485 | Glutamyl-tRNA(Gln) amidotransferase subunit A; mul | 100.0 | |
| 2dc0_A | 434 | Probable amidase; structural genomics, NPPSFA, nat | 100.0 | |
| 3h0l_A | 478 | Glutamyl-tRNA(Gln) amidotransferase subunit A; mul | 100.0 | |
| 3kfu_E | 471 | Glutamyl-tRNA(Gln) amidotransferase subunit A; ASP | 100.0 | |
| 3ppm_A | 573 | Fatty-acid amide hydrolase 1; protein-inhibitor co | 100.0 | |
| 1m22_A | 503 | Peptide amidase, PAM; eleven-stranded beta sheet, | 100.0 | |
| 3a2q_A | 493 | 6-aminohexanoate-cyclic-dimer hydrolase; alpha/bet | 100.0 | |
| 2gi3_A | 476 | Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1 | 100.0 | |
| 1o9p_A | 414 | Malonamidase E2; malonate; 1.8A {Bradyrhizobium ja | 100.0 | |
| 3a1k_A | 521 | Amidase; AS family enzyme, hydrolase; 2.17A {Rhodo | 100.0 |
| >3ip4_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} SCOP: c.117.1.1 PDB: 2df4_A 2dqn_A* 2g5h_A 2g5i_A* 2f2a_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-101 Score=837.70 Aligned_cols=454 Identities=24% Similarity=0.322 Sum_probs=383.8
Q ss_pred hhhccCHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHcCcccEEEeCChHHHHHHHHHhh
Q psy15609 68 ELLLQSATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRFSEALEEAKLLD 147 (567)
Q Consensus 68 ~i~~~s~~~l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n~~lna~v~~~~~~Al~~A~~~D 147 (567)
+|..+|+++|+++|++|++||+||+++||+|| +++|+.+|||++.++++|+++|+++|
T Consensus 2 ~l~~~~~~~l~~~i~~g~~s~~el~~a~l~ri----------------------~~~~~~lna~~~~~~~~Al~~A~~~d 59 (485)
T 3ip4_A 2 SIRYESVENLLTLIKDKKIKPSDVVKDIYDAI----------------------EETDPTIKSFLALDKENAIKKAQELD 59 (485)
T ss_dssp CGGGCCHHHHHHHHHTTSSCHHHHHHHHHHHH----------------------HHHHHHHCCEEEECHHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHcCCCCHHHHHHHHHHHH----------------------HHhCCCceEEEEECHHHHHHHHHHHH
Confidence 36789999999999999999999999999999 99999999999999999999999999
Q ss_pred HHH-HcCCCCCCCCCcccceEEeecCcCCCCCcCCCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccCCCCCC
Q psy15609 148 KQI-ALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWSETRN 226 (567)
Q Consensus 148 ~~~-~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~n 226 (567)
+++ ++|+ . +|||||||+|||+|+++|++||+||..++++++.+||++|++||+||||++||||||||+++++|.|
T Consensus 60 ~~~~~~g~---~-gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~dA~vV~rLr~AGAii~GKTn~~Efa~~~~t~n 135 (485)
T 3ip4_A 60 ELQAKDQM---D-GKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLIGKLNMDEFAMGGSTET 135 (485)
T ss_dssp HHHHTTCC---C-STTTTCEEEEETTBCBTTBCCCTTSGGGTTCCCSSCCHHHHHHHHTTCEEEEEECCSGGGCCSSSTT
T ss_pred HHHHhcCC---C-CCcCCCEEEEEcCcccCCCccCCCChhhcCCCCCCCcHHHHHHHHCCCEEEEecCCcccccCCCCCC
Confidence 998 7763 5 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCCCCCCCcc
Q psy15609 227 MVFGQTNNPYNLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTMV 306 (567)
Q Consensus 227 ~~~G~t~NP~~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~~~~~~~~ 306 (567)
++||+|+||||++|+||||||||||+||+|++++|+|||||||||+||+||||||||||+|+||+.|++|.+ .++|
T Consensus 136 ~~~G~t~NP~~~~~~pGGSSgGsAaaVAag~~~~alGtDtgGSIRiPAa~cGv~GlKPT~Grvs~~G~~p~~----~sld 211 (485)
T 3ip4_A 136 SYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFA----SSLD 211 (485)
T ss_dssp CSSCCCCBTTBTTBCCCSSSHHHHHHHHTTSCSEEEEECSSSTTHHHHHHTTCEEEECCTTSBCCTTBCCSC----TTTC
T ss_pred CCCCCcCCccccCcCCCCCccHHHHHhhcCCCceeeeccCCcchhhhHHHhCCeeecCCCCcccCCCCCCcc----cccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999988 7999
Q ss_pred eeccccCCHhhHHHHHHHhcCCcccCcCccccc---------CCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHhh
Q psy15609 307 SAGPIVKHAEDILPFIKCLVIPEKLHQLKLDRT---------HDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRALD 377 (567)
Q Consensus 307 ~~GpmaR~v~Dl~~ll~v~ag~~p~~~~~l~~~---------~~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~L~ 377 (567)
++|||||+|+|+++++++|+|+++.|+.....+ .+++++||||+.+. +...++++++++++++++.|+
T Consensus 212 ~~Gp~aRsv~D~a~~l~vl~g~d~~d~~~~~~~~~~~~~~~~~~~~~lrigv~~~~---~~~~~~~~v~~a~~~a~~~L~ 288 (485)
T 3ip4_A 212 QIGPLTRNVKDNAIVLEAISGADVNDSTSAPVDDVDFTSEIGKDIKGLKVALPKEY---LGEGVADDVKEAVQNAVETLK 288 (485)
T ss_dssp CEEEEESSHHHHHHHHHHHBSCCTTCTTSCCCCCCCCSTTTTCCCTTCEEEEEGGG---GSTTSCHHHHHHHHHHHHHHH
T ss_pred eeccccCCHHHHHHHHHHhcCCCcccccccccCccchhhhhccCccCcEEEEECCc---ccCCCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999987666544322 14689999999764 245789999999999999999
Q ss_pred hcCCcEEEEecCccchHHHHHHHHHHHhccCcc-hhHHhh---h-cccccchHHHHHHHHh--CCCCCchHHHHH-HHH-
Q psy15609 378 EITEVSAEKLENIKQFKKSYALWRYWMTKEPGN-FARDLV---N-QEGEASWWRETIKIFL--GMSDHTLPAIMK-LID- 448 (567)
Q Consensus 378 ~~lG~~V~ev~~lp~~~~~~~~~~~~~~~e~~~-~~~~l~---~-~~~~~~~~~el~k~~~--~~s~~~~~~~~~-l~~- 448 (567)
+. |++|+++ ++|.+.+....|...+..|... +..+.. . .......+.+++.... ... +.+.. +..
T Consensus 289 ~~-G~~v~~~-~~p~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g 362 (485)
T 3ip4_A 289 SL-GAVVEEV-SLPNTKFGIPSYYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFG----KEVKRRIFLG 362 (485)
T ss_dssp HT-TCEEEEE-CCTTGGGHHHHHHHHHHHHHHHHTTTCSSSSSSCCCTTCCSHHHHHHHHHHHHSC----HHHHHHHHHH
T ss_pred HC-CCEEEEe-CCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccccccHHHHHHhhhhhhcC----HHHHHHHHhc
Confidence 95 9999999 9988776666665444332111 111100 0 0011122333332211 111 22222 111
Q ss_pred -----hCCChHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCCCCCCCccccCC----CCcchhHhhHhhCCCeEEEc
Q psy15609 449 -----MHLPLPKDDWAQEQTDKLRKKLTDVLADDGVLIFPSCPCPATYHYTTFFRP----YNFAYWAIFNVLGFPVVNVP 519 (567)
Q Consensus 449 -----~~~s~~~~~~a~~~r~~l~~~~~~ll~~~dvLL~Pt~p~~Ap~~~~~~~~~----~~~~yT~l~NllGlPaisVP 519 (567)
......+|.++++.|..+++++.++|+++|+||+||+|.+||.+++....+ ....||.+||++|+|+++||
T Consensus 363 ~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP 442 (485)
T 3ip4_A 363 TFALSSGYYDAYYKKSQKVRTLIKNDFDKVFENYDVVVGPTAPTTAFNLGEEIDDPLTMYANDLLTTPVNLAGLPGISVP 442 (485)
T ss_dssp HHHHSTTTTTTTHHHHHHHHHHHHHHHHHHHTTCSEEEEESSSSSCCBTTTSTTCHHHHHGGGTTTHHHHHHTCCEEEEE
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCCEEEeCCCCCCCCCcccccCChHHHhhhhhhhhhhHhhCCCeEEEe
Confidence 223335689999999999999999999999999999999999998643222 12348999999999999999
Q ss_pred CCCCCCCCceEEEEEcCCCChHHHHHHHHHHHHhhcCCCCCCCC
Q psy15609 520 VGLSKDGLPLGVQIVATTNNDKLCIDVANYLEKQSVIGWKPPFN 563 (567)
Q Consensus 520 ~G~~~~GLPvGvQvVg~~~~D~~lLavA~~lE~~~~~gw~~p~p 563 (567)
+|++ +|||+||||||++|+|++||++|++||++ + +|..+.|
T Consensus 443 ~g~~-~GlPvGlqlvg~~~~d~~lL~~A~~lE~~-~-~~~~~~p 483 (485)
T 3ip4_A 443 CGQS-NGRPIGLQFIGKPFDEKTLYRVAYQYETQ-Y-NLHDVYE 483 (485)
T ss_dssp EEEE-TTEEEEEEEECSTTCHHHHHHHHHHHHHH-S-CCTTTGG
T ss_pred CCcC-CCCCEeEEEEcCCCCHHHHHHHHHHHHHh-c-CcccCCC
Confidence 9996 99999999999999999999999999999 5 6876544
|
| >2dc0_A Probable amidase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3h0l_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_A 3h0r_A* | Back alignment and structure |
|---|
| >3kfu_E Glutamyl-tRNA(Gln) amidotransferase subunit A; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3ppm_A Fatty-acid amide hydrolase 1; protein-inhibitor complex, FAAH, oxazole, oxadiazole, endoca degradation, membrane protein; HET: JG1 1DO; 1.78A {Rattus norvegicus} PDB: 2wj2_A* 3k7f_A* 3k83_A* 3k84_A* 3lj6_A* 3lj7_A 3oj8_A* 2wj1_A* 3pr0_A* 2wap_A* 1mt5_A* 2vya_A* 3qk5_A* 3qj8_A* 3qj9_A* 3qkv_A* | Back alignment and structure |
|---|
| >1m22_A Peptide amidase, PAM; eleven-stranded beta sheet, covered double layers of alpha helices on TOP and bottom, hydrolase; HET: EPE; 1.40A {Stenotrophomonas maltophilia} SCOP: c.117.1.1 PDB: 1m21_A* | Back alignment and structure |
|---|
| >3a2q_A 6-aminohexanoate-cyclic-dimer hydrolase; alpha/beta fold, nylon degradation; 1.80A {Arthrobacter SP} PDB: 3a2p_A | Back alignment and structure |
|---|
| >2gi3_A Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1272, structural genomics, joint center for structura genomics, JCSG; HET: MSE MPD; 1.80A {Thermotoga maritima} SCOP: c.117.1.1 PDB: 3al0_A* | Back alignment and structure |
|---|
| >1o9p_A Malonamidase E2; malonate; 1.8A {Bradyrhizobium japonicum} SCOP: c.117.1.1 PDB: 1o9o_A 1obl_A 1och_A 1obk_A 1obi_A 1o9q_A* 1obj_A 1o9n_A 1ock_A 1ocl_A 1ocm_A | Back alignment and structure |
|---|
| >3a1k_A Amidase; AS family enzyme, hydrolase; 2.17A {Rhodococcus SP} PDB: 3a1i_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 567 | ||||
| d2f2aa1 | 485 | c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransf | 1e-60 | |
| d2gi3a1 | 475 | c.117.1.1 (A:1-475) Glutamyl-tRNA(Gln) amidotransf | 6e-54 | |
| d1m22a_ | 490 | c.117.1.1 (A:) Peptide amidase Pam {Stenotrophomon | 3e-45 | |
| d1mt5a_ | 537 | c.117.1.1 (A:) Fatty acid amide hydrolase (oleamid | 6e-44 | |
| d1ocka_ | 412 | c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium jap | 3e-30 |
| >d2f2aa1 c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransferase subunit A {Staphylococcus aureus [TaxId: 1280]} Length = 485 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Amidase signature (AS) enzymes superfamily: Amidase signature (AS) enzymes family: Amidase signature (AS) enzymes domain: Glutamyl-tRNA(Gln) amidotransferase subunit A species: Staphylococcus aureus [TaxId: 1280]
Score = 206 bits (525), Expect = 1e-60
Identities = 117/512 (22%), Positives = 203/512 (39%), Gaps = 64/512 (12%)
Query: 68 ELLLQSATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSK 127
+ +S + T IK+K I +VVK I E+ +
Sbjct: 2 SIRYESVENLLTLIKDKKIKPSDVVKDIYDAI----------------------EETDPT 39
Query: 128 INSVVDNRFSEALEEAKLLDKQIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKR 187
I S + A+++A+ LD+ A D++D G+P K++ + GL +
Sbjct: 40 IKSFLALDKENAIKKAQELDELQAKDQMD---GKLFGIPMGIKDNIITNGLETTCASKML 96
Query: 188 KDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWSETRNMVFGQTNNPYNLSRTVGGSSG 247
+ ++ ++E+L A+L+G N+ E + T F +T NP++ GGSSG
Sbjct: 97 EGFVPIYESTVMEKLHKENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSG 156
Query: 248 GESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTMVS 307
G +A V+A PL LG+D GGS R P YCGV G K T G ++ G+ A ++
Sbjct: 157 GSAAAVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGL----VAFASSLDQ 212
Query: 308 AGPIVKHAEDILPFIK---------CLVIPEKLHQLKLDRTHDLKQLKVFYVEQPGDLKV 358
GP+ ++ +D ++ P + D+K LKV ++ V
Sbjct: 213 IGPLTRNVKDNAIVLEAISGADVNDSTSAPVDDVDFTSEIGKDIKGLKVALPKEYLGEGV 272
Query: 359 SPVSGEMIGAIRKCVRALD----EITEVSAEKLENIKQFKKSYALWRYWMTKEPGNFARD 414
+ ++ A++ V L + EVS + Y + + N +R
Sbjct: 273 AD---DVKEAVQNAVETLKSLGAVVEEVSLPNTKFG--IPSYYVIASSEASS---NLSRF 324
Query: 415 LVNQEGEASWWRETIKIFLGMS-----DHTLPAIMKLIDMHLPLPKDDWAQEQTDKLRKK 469
+ G S +++ MS + + L L D +++ K+R
Sbjct: 325 DGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSSGYYDAYYKKSQKVRTL 384
Query: 470 LTD----VLADDGVLIFPSCPCPATYHYTTFFRPY----NFAYWAIFNVLGFPVVNVPVG 521
+ + V + V++ P+ P A P N N+ G P ++VP G
Sbjct: 385 IKNDFDKVFENYDVVVGPTAPTTAFNLGEEIDDPLTMYANDLLTTPVNLAGLPGISVPCG 444
Query: 522 LSKDGLPLGVQIVATTNNDKLCIDVANYLEKQ 553
S +G P+G+Q + ++K VA E Q
Sbjct: 445 QS-NGRPIGLQFIGKPFDEKTLYRVAYQYETQ 475
|
| >d2gi3a1 c.117.1.1 (A:1-475) Glutamyl-tRNA(Gln) amidotransferase subunit A {Thermotoga maritima [TaxId: 2336]} Length = 475 | Back information, alignment and structure |
|---|
| >d1m22a_ c.117.1.1 (A:) Peptide amidase Pam {Stenotrophomonas maltophilia [TaxId: 40324]} Length = 490 | Back information, alignment and structure |
|---|
| >d1mt5a_ c.117.1.1 (A:) Fatty acid amide hydrolase (oleamide hydrolase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 537 | Back information, alignment and structure |
|---|
| >d1ocka_ c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium japonicum [TaxId: 375]} Length = 412 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 567 | |||
| d2f2aa1 | 485 | Glutamyl-tRNA(Gln) amidotransferase subunit A {Sta | 100.0 | |
| d1mt5a_ | 537 | Fatty acid amide hydrolase (oleamide hydrolase) {R | 100.0 | |
| d1m22a_ | 490 | Peptide amidase Pam {Stenotrophomonas maltophilia | 100.0 | |
| d2gi3a1 | 475 | Glutamyl-tRNA(Gln) amidotransferase subunit A {The | 100.0 | |
| d1ocka_ | 412 | Malonamidase E2 {Bradyrhizobium japonicum [TaxId: | 100.0 |
| >d2f2aa1 c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransferase subunit A {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Amidase signature (AS) enzymes superfamily: Amidase signature (AS) enzymes family: Amidase signature (AS) enzymes domain: Glutamyl-tRNA(Gln) amidotransferase subunit A species: Staphylococcus aureus [TaxId: 1280]
Probab=100.00 E-value=1.9e-97 Score=809.37 Aligned_cols=458 Identities=24% Similarity=0.315 Sum_probs=388.1
Q ss_pred hhccCHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHcCcccEEEeCChHHHHHHHHHhhH
Q psy15609 69 LLLQSATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRFSEALEEAKLLDK 148 (567)
Q Consensus 69 i~~~s~~~l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n~~lna~v~~~~~~Al~~A~~~D~ 148 (567)
|...|+.||+++|++|++||+||+++||+|| +++|+.+|||++.++++|+++|+++|+
T Consensus 3 ~~~~s~~~l~~~~~~~~~s~~e~~~~~l~ri----------------------~~~~~~lna~~~~~~~~a~~~A~~~d~ 60 (485)
T d2f2aa1 3 IRYESVENLLTLIKDKKIKPSDVVKDIYDAI----------------------EETDPTIKSFLALDKENAIKKAQELDE 60 (485)
T ss_dssp STTCCHHHHHHHHHTTSSCHHHHHHHHHHHH----------------------HHHHHHHCCEEEECHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCCHHHHHHHHHHHH----------------------HHhCCCccEEEEeCHHHHHHHHHHHHH
Confidence 4568999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCcccceEEeecCcCCCCCcCCCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccCCCCCCCC
Q psy15609 149 QIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWSETRNMV 228 (567)
Q Consensus 149 ~~~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~n~~ 228 (567)
++++| +..+|||||||+|||+|+++|++||+|+..+++..+.+|+++|++|+++|||++||||||||+++.++.|.+
T Consensus 61 ~~~~~---~~~gpL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~d~~~v~~l~~~Gai~~gkt~~~e~~~~~~~~n~~ 137 (485)
T d2f2aa1 61 LQAKD---QMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLIGKLNMDEFAMGGSTETSY 137 (485)
T ss_dssp HHHTT---CCCSTTTTCEEEEETTBCBTTBCCCTTCGGGTTCCCSSCCHHHHHHHHTTCEEEEEECCSGGGCCSSSTTCS
T ss_pred HHHCC---CCCCCcCcCeEEEEcccccCCCccCCcChhhccCCccccccccccccccccccccccchhhhcccccccCcc
Confidence 99988 477999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCCCCCCCccee
Q psy15609 229 FGQTNNPYNLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTMVSA 308 (567)
Q Consensus 229 ~G~t~NP~~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~ 308 (567)
||+|+||||++++||||||||||+||+|++++|+|||||||||+||+||||||||||+|+||++|++|.+ .++|++
T Consensus 138 ~g~~~NP~~~~~~~GGSSgGsaaavA~g~~~~alGtDt~GSiR~PAa~~Gl~G~kPt~G~is~~g~~~~~----~~~d~~ 213 (485)
T d2f2aa1 138 FKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFA----SSLDQI 213 (485)
T ss_dssp SCCCCBTTBTTBCCCSSSHHHHHHHHTTSCSCEEEECSSSTTHHHHHHTTCEEEECCTTSBCCTTBCCSC----TTTCCE
T ss_pred ccCcCCCCCcccccCCccccchhhHHhccCceEEecCCCchhhhhHHHhCceeecCCCCCCCCCCCCCCc----ccCCee
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998 899999
Q ss_pred ccccCCHhhHHHHHHHhcCCcccCcCccccc---------CCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHhhhc
Q psy15609 309 GPIVKHAEDILPFIKCLVIPEKLHQLKLDRT---------HDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRALDEI 379 (567)
Q Consensus 309 GpmaR~v~Dl~~ll~v~ag~~p~~~~~l~~~---------~~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~L~~~ 379 (567)
|||||+++|+++++++|+|.++.|+...+.+ .+++++||||+.++. ...++++++++++++++.|++.
T Consensus 214 Gpmar~v~D~~~ll~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~lrig~~~~~~---~~~~~~~i~~a~~~a~~~L~~~ 290 (485)
T d2f2aa1 214 GPLTRNVKDNAIVLEAISGADVNDSTSAPVDDVDFTSEIGKDIKGLKVALPKEYL---GEGVADDVKEAVQNAVETLKSL 290 (485)
T ss_dssp EEEESSHHHHHHHHHHHBSCBTTBTTSCCCCCCCCSTTTTCCCTTCEEEEEGGGG---STTSCHHHHHHHHHHHHHHHHT
T ss_pred ccccCCHHHHHHHHhhcccccccccccCCCCccchhhhhcCCccCCEEEEEcccc---cCcCCHHHHHHHHHHHHHHHHC
Confidence 9999999999999999999887665443222 257899999997754 5678999999999999999995
Q ss_pred CCcEEEEecCccchHHHHHHHHHHHhccC----cchhHHhhh-cccccchHHHHHHHHhC--CCCCchHHHHH-HHH--h
Q psy15609 380 TEVSAEKLENIKQFKKSYALWRYWMTKEP----GNFARDLVN-QEGEASWWRETIKIFLG--MSDHTLPAIMK-LID--M 449 (567)
Q Consensus 380 lG~~V~ev~~lp~~~~~~~~~~~~~~~e~----~~~~~~l~~-~~~~~~~~~el~k~~~~--~s~~~~~~~~~-l~~--~ 449 (567)
|++|+++ ++|.+......|......+. ..+...... .......+.++.+.... ..+.....+.. ... .
T Consensus 291 -G~~v~ev-~lp~~~~~~~~~~~~~~~e~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~ 368 (485)
T d2f2aa1 291 -GAVVEEV-SLPNTKFGIPSYYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSS 368 (485)
T ss_dssp -TCEEEEE-CCTTGGGHHHHHHHHHHHHHHHHTTTCSSSSSSCCCSSCCSHHHHHHHHHHHHSCHHHHHHHHHHHHHHST
T ss_pred -CCEEEEe-CCCchhhhHHHHHHHHHHHHHHHHHHhhhhhhccccccccCHHHHHHHhhhhhcCHHHHHHHHhhhhhhcc
Confidence 9999999 99987666555543332211 111100000 11122233333332211 11111111111 111 5
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCCCCCCCccccCC----CCcchhHhhHhhCCCeEEEcCCCCCC
Q psy15609 450 HLPLPKDDWAQEQTDKLRKKLTDVLADDGVLIFPSCPCPATYHYTTFFRP----YNFAYWAIFNVLGFPVVNVPVGLSKD 525 (567)
Q Consensus 450 ~~s~~~~~~a~~~r~~l~~~~~~ll~~~dvLL~Pt~p~~Ap~~~~~~~~~----~~~~yT~l~NllGlPaisVP~G~~~~ 525 (567)
.+....|.++++.+..+++.++++|+++|+||+||.+.+||.+++....+ .+..||.+||++|+|+++||+|+ .+
T Consensus 369 ~~~~a~~~~~~~~~~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~t~~~Nl~G~PaisvP~G~-~d 447 (485)
T d2f2aa1 369 GYYDAYYKKSQKVRTLIKNDFDKVFENYDVVVGPTAPTTAFNLGEEIDDPLTMYANDLLTTPVNLAGLPGISVPCGQ-SN 447 (485)
T ss_dssp TTTTTTHHHHHHHHHHHHHHHHHHTTTCSEEEEESSSSSCCBTTTSTTCHHHHHGGGTTTHHHHHHTCCEEEEEEEE-ET
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHccCCEEEeCCCCCCCCCcccccCCHHHHhhhhHHHHHHHHHCCCeEEEECCC-CC
Confidence 56677889999999999999999999999999999999999998765432 23458999999999999999998 78
Q ss_pred CCceEEEEEcCCCChHHHHHHHHHHHHhhcCCCCCCCC
Q psy15609 526 GLPLGVQIVATTNNDKLCIDVANYLEKQSVIGWKPPFN 563 (567)
Q Consensus 526 GLPvGvQvVg~~~~D~~lLavA~~lE~~~~~gw~~p~p 563 (567)
|||+||||||++|+|+.||++|++||++ + +|..-.|
T Consensus 448 GlPvGlQiig~~~~D~~LL~~A~~~E~~-~-~~~~~~p 483 (485)
T d2f2aa1 448 GRPIGLQFIGKPFDEKTLYRVAYQYETQ-Y-NLHDVYE 483 (485)
T ss_dssp TEEEEEEEECSTTCHHHHHHHHHHHHHH-S-CCTTTGG
T ss_pred CCCEeEEEECCCCCHHHHHHHHHHHHhh-C-CCCcCCC
Confidence 9999999999999999999999999999 6 8876554
|
| >d1mt5a_ c.117.1.1 (A:) Fatty acid amide hydrolase (oleamide hydrolase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1m22a_ c.117.1.1 (A:) Peptide amidase Pam {Stenotrophomonas maltophilia [TaxId: 40324]} | Back information, alignment and structure |
|---|
| >d2gi3a1 c.117.1.1 (A:1-475) Glutamyl-tRNA(Gln) amidotransferase subunit A {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1ocka_ c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium japonicum [TaxId: 375]} | Back information, alignment and structure |
|---|