Psyllid ID: psy15662

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250------
MALGICKGYLHGAWKRITAKDICVKRMSGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHLMQIPVVKEPTWLWDTIQRWLNTLYLKNTGGNGTAEWRNGETLATECHKKNKIQMKKILSKDLNTEADWLK
cHHccccccccccEEEEccccEEEEEccccccccEEEEEcccccccccHHHHHHHHHHHHcccccccccccccEEEEccccccccEEEEEEccccccccccEEEEEEEcccccEEccccHHHHHHHHHHHHHcccccEEEEEEccEEEEEEEccccccccccccccccccHHHHHHHHHHHHccEEEccccccccccHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHcHHHHHHHcc
cHHHHHHHHcccccEEccHHHEEEEEEEccccHHHHHcccccccccccHHHHHHHHHHHHHcccccccccccEEEEEEccccccEEEEEEcccccccccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHccccccEEEEcccccEEEEccccEEcccccccHHHHccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHccccccHHccHHHHHHHHHHHHHHHHHHHHHHc
MALGICKGYLHGAWKRITAKDICVKRMSGGLTNMLYHVTLlqpiqssepsEVLLRIYGQTHGERALESIITDSVIFTLLGGLTNMLYHVTLlqpiqssepsEVLLRIYGQTHGERALESIITDSVIFTLLserklgptlhgvfpggrieeyipdketrkarslkyseltdpAISRKIAEKMADIHLmqipvvkeptwLWDTIQRWLNTLYLkntggngtaewrngetlateCHKKNKIQMKKILSKDLnteadwlk
MALGICkgylhgawkriTAKDICVKRMSGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSerklgptlhgvfpggrieeyipdketrkarslkyseltdpaiSRKIAEKMADIHLMQIPVVKEPTWLWDTIQRWLNTLYLKNTGGNGTAEWRNGETlatechkknkiqmkkilskdlnteadwlk
MALGICKGYLHGAWKRITAKDICVKRMSGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHLMQIPVVKEPTWLWDTIQRWLNTLYLKNTGGNGTAEWRNGETLATECHKKNKIQMKKILSKDLNTEADWLK
**LGICKGYLHGAWKRITAKDICVKRMSGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIP******************AISRKIAEKMADIHLMQIPVVKEPTWLWDTIQRWLNTLYLKNTGGNGTAEWRNGETLATECHK**********************
MALGICKGYLHGAWKRITAKDICVKRMSGGLTNMLYHVTLLQ*********VLLRIYGQTHGERALESIITDSVIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHLMQIPVVKEPTWLWDTIQRWLNTLYLKNTGGNGTAEWRNGETLATECHKKNKIQMKKILSKDLNTEADWLK
MALGICKGYLHGAWKRITAKDICVKRMSGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHLMQIPVVKEPTWLWDTIQRWLNTLYLKNTGGNGTAEWRNGETLATECHKKNKIQMKKILSKDLNTEADWLK
MALGICKGYLHGAWKRITAKDICVKRMSGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHLMQIPVVKEPTWLWDTIQRWLNTLYLKNTGGNGTAEWRNGETLATECHKKNKIQMKKILSKDLNTEADWLK
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MALGICKGYLHGAWKRITAKDICVKRMSGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHLMQIPVVKEPTWLWDTIQRWLNTLYLKNTGGNGTAEWRNGETLATECHKKNKIQMKKILSKDLNTEADWLK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query256 2.2.26 [Sep-21-2011]
Q9Y259 395 Choline/ethanolamine kina yes N/A 0.496 0.321 0.437 1e-26
Q01134 453 Choline kinase alpha OS=R yes N/A 0.636 0.359 0.347 3e-26
O54783 394 Choline/ethanolamine kina yes N/A 0.476 0.309 0.454 4e-26
O54804 453 Choline kinase alpha OS=M yes N/A 0.636 0.359 0.347 8e-26
O55229 394 Choline/ethanolamine kina yes N/A 0.476 0.309 0.446 9e-26
P35790 457 Choline kinase alpha OS=H no N/A 0.640 0.358 0.320 1e-24
P46558 371 Choline kinase B1 OS=Caen no N/A 0.398 0.274 0.364 4e-14
P46560 368 Putative choline kinase B no N/A 0.382 0.266 0.355 1e-11
P46559 369 Choline kinase B2 OS=Caen no N/A 0.574 0.398 0.321 1e-11
Q869T9 349 Probable ethanolamine kin yes N/A 0.476 0.349 0.321 1e-07
>sp|Q9Y259|CHKB_HUMAN Choline/ethanolamine kinase OS=Homo sapiens GN=CHKB PE=1 SV=3 Back     alignment and function desciption
 Score =  119 bits (299), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/137 (43%), Positives = 90/137 (65%), Gaps = 10/137 (7%)

Query: 75  IFTLLGGLTNMLYHVTLLQ--PIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSE 132
           ++ + GGL+N+L+  +L    P    EP EVLLR+YG     + ++S++ +SV+F +L+E
Sbjct: 71  VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL--QGVDSLVLESVMFAILAE 128

Query: 133 RKLGPTLHGVFPGGRIEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHLMQIPVV 192
           R LGP L+GVFP GR+E+YIP      +R LK  EL +P +S  IA KMA  H M++P  
Sbjct: 129 RSLGPQLYGVFPEGRLEQYIP------SRPLKTQELREPVLSAAIATKMAQFHGMEMPFT 182

Query: 193 KEPTWLWDTIQRWLNTL 209
           KEP WL+ T++R+L  +
Sbjct: 183 KEPHWLFGTMERYLKQI 199
Has a key role in phospholipid biosynthesis. Catalyzes the first step in phosphatidylethanolamine biosynthesis. Phosphorylates ethanolamine, and can also act on choline (in vitro). Has higher activity with ethanolamine. May not significantly contribute to in vivo phosphatidylcholine biosynthesis.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 8EC: 2
>sp|Q01134|CHKA_RAT Choline kinase alpha OS=Rattus norvegicus GN=Chka PE=2 SV=2 Back     alignment and function description
>sp|O54783|CHKB_RAT Choline/ethanolamine kinase OS=Rattus norvegicus GN=Chkb PE=1 SV=3 Back     alignment and function description
>sp|O54804|CHKA_MOUSE Choline kinase alpha OS=Mus musculus GN=Chka PE=1 SV=3 Back     alignment and function description
>sp|O55229|CHKB_MOUSE Choline/ethanolamine kinase OS=Mus musculus GN=Chkb PE=1 SV=3 Back     alignment and function description
>sp|P35790|CHKA_HUMAN Choline kinase alpha OS=Homo sapiens GN=CHKA PE=1 SV=3 Back     alignment and function description
>sp|P46558|KICB1_CAEEL Choline kinase B1 OS=Caenorhabditis elegans GN=ckb-1 PE=2 SV=2 Back     alignment and function description
>sp|P46560|KICB3_CAEEL Putative choline kinase B3 OS=Caenorhabditis elegans GN=ckb-3 PE=2 SV=2 Back     alignment and function description
>sp|P46559|KICB2_CAEEL Choline kinase B2 OS=Caenorhabditis elegans GN=ckb-2 PE=1 SV=2 Back     alignment and function description
>sp|Q869T9|EKIA_DICDI Probable ethanolamine kinase A OS=Dictyostelium discoideum GN=etnkA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query256
157119947 416 choline/ethanolamine kinase [Aedes aegyp 0.816 0.502 0.463 6e-49
157119949 489 choline/ethanolamine kinase [Aedes aegyp 0.816 0.427 0.463 1e-48
170030324 498 choline/ethanolamine kinase [Culex quinq 0.835 0.429 0.441 2e-47
312378047 1002 hypothetical protein AND_10480 [Anophele 0.929 0.237 0.434 7e-45
383849571 379 PREDICTED: choline/ethanolamine kinase-l 0.722 0.488 0.436 1e-44
158297247 510 AGAP007957-PA [Anopheles gambiae str. PE 0.843 0.423 0.413 2e-44
328697438 397 PREDICTED: choline/ethanolamine kinase-l 0.699 0.450 0.410 3e-44
380014375 396 PREDICTED: choline/ethanolamine kinase-l 0.585 0.378 0.483 5e-44
328775933 395 PREDICTED: choline/ethanolamine kinase-l 0.585 0.379 0.483 7e-44
307207343 372 Choline/ethanolamine kinase [Harpegnatho 0.710 0.489 0.442 1e-43
>gi|157119947|ref|XP_001653455.1| choline/ethanolamine kinase [Aedes aegypti] gi|108875119|gb|EAT39344.1| AAEL008853-PB [Aedes aegypti] Back     alignment and taxonomy information
 Score =  199 bits (507), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 119/257 (46%), Positives = 149/257 (57%), Gaps = 48/257 (18%)

Query: 1   MALGICKGYLHGAWKRITAKDICVKRMSGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQT 60
           +A  IC+ YL GAWK I A+D+ +KR+SGGL+N LY+V L      S P           
Sbjct: 4   IAARICRDYLTGAWKTIPAEDLQLKRISGGLSNFLYYVRLPDQQNGSSPKS--------- 54

Query: 61  HGERALESIITDSVIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESI 120
                 +    DS         +NML            EP EVLLRIYGQTHGE ALES+
Sbjct: 55  -SNHCYKRARKDSY--------SNML------------EPKEVLLRIYGQTHGESALESM 93

Query: 121 ITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIPDKETRKARSLKYSELTDPAISRKIAEK 180
           +T+SV+FTLLSERKLGP LHG+FPGGRIE+YIP      AR+L  SEL+DP IS KIAEK
Sbjct: 94  LTESVVFTLLSERKLGPKLHGIFPGGRIEQYIP------ARALTTSELSDPKISLKIAEK 147

Query: 181 MADIHLMQIPVVKEPTWLWDTIQRWLNTLYLKNTGGNGTAEWRNGETLATECHKKNKIQM 240
           MA IH + IPV KEP WLW+T+ RWL +  ++ T      +  NG           +I  
Sbjct: 148 MAAIHSLDIPVSKEPDWLWNTMNRWLKS--VETTLETFRKDRTNG---------NKRIDG 196

Query: 241 KKILSK-DLNTEADWLK 256
            +I++  DL  E +WLK
Sbjct: 197 DEIITDLDLRAEVEWLK 213

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|157119949|ref|XP_001653456.1| choline/ethanolamine kinase [Aedes aegypti] gi|108875120|gb|EAT39345.1| AAEL008853-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|170030324|ref|XP_001843039.1| choline/ethanolamine kinase [Culex quinquefasciatus] gi|167866931|gb|EDS30314.1| choline/ethanolamine kinase [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|312378047|gb|EFR24723.1| hypothetical protein AND_10480 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|383849571|ref|XP_003700418.1| PREDICTED: choline/ethanolamine kinase-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|158297247|ref|XP_317515.4| AGAP007957-PA [Anopheles gambiae str. PEST] gi|157015102|gb|EAA12861.4| AGAP007957-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|328697438|ref|XP_001942911.2| PREDICTED: choline/ethanolamine kinase-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|380014375|ref|XP_003691209.1| PREDICTED: choline/ethanolamine kinase-like [Apis florea] Back     alignment and taxonomy information
>gi|328775933|ref|XP_624492.2| PREDICTED: choline/ethanolamine kinase-like [Apis mellifera] Back     alignment and taxonomy information
>gi|307207343|gb|EFN85093.1| Choline/ethanolamine kinase [Harpegnathos saltator] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query256
FB|FBgn0032955 554 CG2201 [Drosophila melanogaste 0.410 0.189 0.585 1.2e-41
UNIPROTKB|Q9Y259 395 CHKB "Choline/ethanolamine kin 0.519 0.336 0.437 4.1e-28
UNIPROTKB|E1BT22 452 CHKA "Uncharacterized protein" 0.355 0.201 0.479 9.2e-28
RGD|61944 453 Chka "choline kinase alpha" [R 0.378 0.214 0.457 1.1e-26
MGI|MGI:107760 453 Chka "choline kinase alpha" [M 0.378 0.214 0.457 2.4e-26
RGD|61826 394 Chkb "choline kinase beta" [Ra 0.476 0.309 0.454 1.8e-25
UNIPROTKB|G3X782 395 CHKB "Uncharacterized protein" 0.476 0.308 0.462 1.8e-25
UNIPROTKB|P35790 457 CHKA "Choline kinase alpha" [H 0.355 0.199 0.459 1.8e-25
MGI|MGI:1328313 394 Chkb "choline kinase beta" [Mu 0.476 0.309 0.446 4.6e-25
UNIPROTKB|F1P866 340 CHKA "Uncharacterized protein" 0.359 0.270 0.464 4.3e-24
FB|FBgn0032955 CG2201 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 350 (128.3 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
 Identities = 65/111 (58%), Positives = 86/111 (77%)

Query:    99 EPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIPDKETR 158
             +P EVLLRIYGQTHG+ ALES+IT+SV+F LLSER  GP LHG+FPGGRIE+YIP     
Sbjct:   185 QPREVLLRIYGQTHGDHALESMITESVVFALLSERNYGPKLHGIFPGGRIEQYIP----- 239

Query:   159 KARSLKYSELTDPAISRKIAEKMADIHLMQIPVVKEPTWLWDTIQRWLNTL 209
              AR+L  +EL +  I +++AEKM +IH + IP+ KEP W+W+ +QRW++ L
Sbjct:   240 -ARALTTAELGEQRILKRVAEKMGEIHSLNIPMSKEPDWIWNCMQRWVSGL 289
GO:0004103 "choline kinase activity" evidence=ISS;NAS
GO:0016310 "phosphorylation" evidence=NAS
GO:0004305 "ethanolamine kinase activity" evidence=NAS
GO:0046474 "glycerophospholipid biosynthetic process" evidence=IEA
UNIPROTKB|Q9Y259 CHKB "Choline/ethanolamine kinase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BT22 CHKA "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|61944 Chka "choline kinase alpha" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:107760 Chka "choline kinase alpha" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|61826 Chkb "choline kinase beta" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|G3X782 CHKB "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P35790 CHKA "Choline kinase alpha" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1328313 Chkb "choline kinase beta" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1P866 CHKA "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query256
cd05156 302 cd05156, ChoK_euk, Choline Kinase (ChoK) in eukary 9e-42
pfam01633206 pfam01633, Choline_kinase, Choline/ethanolamine ki 5e-30
cd05157235 cd05157, ETNK_euk, Ethanolamine kinase (ETNK) in e 8e-22
PLN02236 344 PLN02236, PLN02236, choline kinase 3e-17
cd05151170 cd05151, ChoK, Choline Kinase (ChoK) 6e-12
PLN02421 330 PLN02421, PLN02421, phosphotransferase, alcohol gr 2e-11
PTZ00296 442 PTZ00296, PTZ00296, choline kinase; Provisional 5e-07
cd05120155 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot 6e-04
>gnl|CDD|240177 cd05156, ChoK_euk, Choline Kinase (ChoK) in eukaryotes Back     alignment and domain information 
 Score =  144 bits (365), Expect = 9e-42
 Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 18/180 (10%)

Query: 77  TLLGGLTNMLYHVTLLQPIQSS-EPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKL 135
            + GGLTN +Y V+L      S EP +VLLR+YGQ+     L     + V+F  LSER L
Sbjct: 5   KISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV--ELLIDRERELVVFARLSERNL 62

Query: 136 GPTLHGVFPGGRIEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHLMQIPVVKEP 195
           GP L+G+FP GRIEE+IP      +R+L   EL DP IS +IA +MA +H + +P+  E 
Sbjct: 63  GPKLYGIFPNGRIEEFIP------SRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEE 116

Query: 196 TWLWDTIQRWLNTLYLKNTGGNGTAEWRNGETLATECHKKNKIQMKKILSKDLNTEADWL 255
             L   I + L              E  + ++               +  +D      +L
Sbjct: 117 RDLTPAIWKLLK---QWLDLAETVIEIVDSDSEKLLEV------ELSLFLEDEAKYLRFL 167

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancers such as breast, lung, colon, prostate, neuroblastoma, and hepatic lymphoma. In mammalian cells, there are three ChoK isoforms (A-1, A-2, and B) which are active in homo or heterodimeric forms. Length = 302
>gnl|CDD|216617 pfam01633, Choline_kinase, Choline/ethanolamine kinase Back     alignment and domain information
>gnl|CDD|240178 cd05157, ETNK_euk, Ethanolamine kinase (ETNK) in eukaryotes Back     alignment and domain information
>gnl|CDD|177880 PLN02236, PLN02236, choline kinase Back     alignment and domain information
>gnl|CDD|240172 cd05151, ChoK, Choline Kinase (ChoK) Back     alignment and domain information
>gnl|CDD|215231 PLN02421, PLN02421, phosphotransferase, alcohol group as acceptor/kinase Back     alignment and domain information
>gnl|CDD|240350 PTZ00296, PTZ00296, choline kinase; Provisional Back     alignment and domain information
>gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 256
KOG2686|consensus 366 100.0
KOG4720|consensus 391 99.97
PLN02421 330 phosphotransferase, alcohol group as acceptor/kina 99.96
PTZ00296 442 choline kinase; Provisional 99.96
PTZ00384 383 choline kinase; Provisional 99.96
PLN02236 344 choline kinase 99.95
PF01633211 Choline_kinase: Choline/ethanolamine kinase; Inter 99.83
cd05157235 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. 99.82
cd05156 302 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The 99.81
TIGR02721256 ycfN_thiK thiamine kinase. Members of this family 99.68
cd05151170 ChoK Choline Kinase (ChoK). The ChoK subfamily is 99.35
cd05154223 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an 98.94
TIGR02172226 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou 98.83
cd05153 296 HomoserineK_II Homoserine Kinase, type II. Homoser 98.46
cd05150244 APH Aminoglycoside 3'-phosphotransferase (APH). Th 98.39
PF01636239 APH: Phosphotransferase enzyme family This family 98.21
cd05155235 APH_ChoK_like_1 Uncharacterized bacterial proteins 98.04
TIGR00938 307 thrB_alt homoserine kinase, Neisseria type. Homose 98.03
PLN02876 822 acyl-CoA dehydrogenase 97.68
PRK05231 319 homoserine kinase; Provisional 97.64
cd05120155 APH_ChoK_like Aminoglycoside 3'-phosphotransferase 97.45
COG0510 269 ycfN Thiamine kinase and related kinases [Coenzyme 97.22
PRK11768 325 serine/threonine protein kinase; Provisional 96.94
cd05152276 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH 96.76
PRK10593 297 hypothetical protein; Provisional 96.64
PRK09550 401 mtnK methylthioribose kinase; Reviewed 96.36
COG3173 321 Predicted aminoglycoside phosphotransferase [Gener 96.28
PRK06148 1013 hypothetical protein; Provisional 95.69
COG2334 331 Putative homoserine kinase type II (protein kinase 95.51
TIGR02906 313 spore_CotS spore coat protein, CotS family. Member 95.5
PLN02756 418 S-methyl-5-thioribose kinase 95.43
PRK06149 972 hypothetical protein; Provisional 94.94
TIGR03724199 arch_bud32 Kae1-associated kinase Bud32. Members o 94.92
PRK12396 409 5-methylribose kinase; Reviewed 94.89
PF03881 288 Fructosamin_kin: Fructosamine kinase; InterPro: IP 94.84
PRK10359232 lipopolysaccharide core biosynthesis protein; Prov 94.68
TIGR02904 309 spore_ysxE spore coat protein YsxE. Members of thi 94.01
TIGR01767 370 MTRK 5-methylthioribose kinase. This enzyme is inv 93.5
PRK01723239 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed 93.4
COG3642204 Mn2+-dependent serine/threonine protein kinase [Si 92.87
cd06638286 STKc_myosinIIIA Catalytic domain of the Protein Se 92.1
smart00090237 RIO RIO-like kinase. 91.71
PLN00034353 mitogen-activated protein kinase kinase; Provision 90.42
cd05146197 RIO3_euk RIO kinase family; eukaryotic RIO3, catal 90.19
PLN02421 330 phosphotransferase, alcohol group as acceptor/kina 89.43
cd00180215 PKc Catalytic domain of Protein Kinases. Protein K 89.29
cd06917277 STKc_NAK1_like Catalytic domain of Fungal Nak1-lik 89.1
cd06608275 STKc_myosinIII_like Catalytic domain of Class III 89.06
KOG3087|consensus229 88.45
cd05119187 RIO RIO kinase family, catalytic domain. The RIO k 88.44
PTZ00384 383 choline kinase; Provisional 87.77
cd06639291 STKc_myosinIIIB Catalytic domain of the Protein Se 87.71
PTZ00296 442 choline kinase; Provisional 87.32
COG3001 286 Uncharacterized protein conserved in bacteria [Fun 86.88
cd05157235 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. 86.72
COG2112201 Predicted Ser/Thr protein kinase [Signal transduct 86.55
cd05144198 RIO2_C RIO kinase family; RIO2, C-terminal catalyt 86.5
PRK10271188 thiK thiamine kinase; Provisional 86.26
PRK09188 365 serine/threonine protein kinase; Provisional 85.56
cd06640277 STKc_MST4 Catalytic domain of the Protein Serine/T 85.0
cd05145190 RIO1_like RIO kinase family; RIO1, RIO3 and simila 84.9
PRK14879211 serine/threonine protein kinase; Provisional 84.81
PLN02236 344 choline kinase 84.67
PF04655253 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic r 84.39
cd07831282 STKc_MOK Catalytic domain of the Serine/Threonine 83.57
cd05046275 PTK_CCK4 Pseudokinase domain of the Protein Tyrosi 83.5
cd05591 321 STKc_nPKC_epsilon Catalytic domain of the Protein 82.75
cd06621287 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek 82.61
cd05034261 PTKc_Src_like Catalytic domain of Src kinase-like 82.56
cd05122253 PKc_STE Catalytic domain of STE family Protein Kin 82.5
cd06613262 STKc_MAP4K3_like Catalytic domain of Mitogen-activ 82.24
cd08219255 STKc_Nek3 Catalytic domain of the Protein Serine/T 82.09
PF06293206 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; 82.05
cd05038284 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P 81.06
cd05611260 STKc_Rim15_like Catalytic domain of fungal Rim15-l 80.79
PRK12274218 serine/threonine protein kinase; Provisional 80.65
cd05147190 RIO1_euk RIO kinase family; eukaryotic RIO1, catal 80.48
cd05587 324 STKc_cPKC Catalytic domain of the Protein Serine/T 80.36
cd05570 318 STKc_PKC Catalytic domain of the Protein Serine/Th 80.13
cd06623264 PKc_MAPKK_plant_like Catalytic domain of Plant dua 80.11
>KOG2686|consensus Back     alignment and domain information 
Probab=100.00  E-value=3.7e-34  Score=268.67  Aligned_cols=181  Identities=37%  Similarity=0.654  Sum_probs=157.7

Q ss_pred             CHhhhHhhhcCCcCcccCCCcEEEEEeccceeeeeEEEEecCCCCCCChhHHHHhhhcccccccccccccccceEEeecC
Q psy15662          1 MALGICKGYLHGAWKRITAKDICVKRMSGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLG   80 (256)
Q Consensus         1 ~~~~ic~~~l~~~W~~v~~~~i~v~~isggltN~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~i~~l~G   80 (256)
                      +|..+|++||+|+|++|..+...++++.||.+|.+|+|+.|....+.                                 
T Consensus        22 ~~~~~~~~~l~~~w~~v~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---------------------------------   68 (366)
T KOG2686|consen   22 RAKELCAQYLGGAWRDVINEEQRLEVIPGGGSNLLFVVTSSASTTPI---------------------------------   68 (366)
T ss_pred             HHHHHHHHHhhhHHhhhhhhhheeeeccCCCcceEEEEecCcccCCc---------------------------------
Confidence            36789999999999999999999999999999999999987654321                                 


Q ss_pred             ccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCCeEEEEeecCCCCCcc
Q psy15662         81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIPDKETRKA  160 (256)
Q Consensus        81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~nGrIEefi~~~~~~~g  160 (256)
                                      ...+++||+||||+..  + +++|..|+++|++||++|+||++||+|+|||+|||||      +
T Consensus        69 ----------------~~~~~k~LlRiyg~~~--~-~~~~~~Esv~fa~lSer~lGPkL~G~F~~GR~Eefip------S  123 (366)
T KOG2686|consen   69 ----------------KDEPRKVLLRIYGQGV--D-FSQRETESVMFAILSERGLGPKLYGFFSGGRFEEFIP------S  123 (366)
T ss_pred             ----------------ccccceeEEEEecCCc--c-HHHhhhHHHHHHHHhhcCCCcceeeecCCccHhhhcc------c
Confidence                            2457899999999987  3 8999999999999999999999999999999999999      9


Q ss_pred             ccCCCCCCCChHHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhhhhccCCCCccccccCccchhhhhhhhhhhh
Q psy15662        161 RSLKYSELTDPAISRKIAEKMADIHLMQIPVVKEPTWLWDTIQRWLNTLYLKNTGGNGTAEWRNGETLATECHKKNKIQM  240 (256)
Q Consensus       161 r~Lt~~el~dp~i~~~IA~~La~lH~~~ip~~k~P~~l~~~i~kwl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (256)
                      |+|+.+|+++|++++.||++|+++|.+++|++|+|.++|+++++|+..++.  +.+.          .+     .-...+
T Consensus       124 RtL~~~~i~~p~~S~~Ia~~~~~~H~~~~p~~ke~~~~~~~~~~wl~~~~~--~~~~----------~~-----~~~~~~  186 (366)
T KOG2686|consen  124 RTLTLADIRDPEISKRIAAKLAEYHGIEVPGPKEPRSLWERYKKWLKGAKK--IKPT----------EV-----SYSCGP  186 (366)
T ss_pred             cccchHhhcchhHHHHHHHHHHHhcCCcCCCCccHHHHHHHHHHHHhhhhh--cCCC----------cc-----chhccc
Confidence            999999999999999999999999999999999987899999999998741  2111          11     123344


Q ss_pred             hccChhhHHHHHHhcC
Q psy15662        241 KKILSKDLNTEADWLK  256 (256)
Q Consensus       241 ~~~~~~~L~~E~~~l~  256 (256)
                      +.+..++|..|+++++
T Consensus       187 ~~~~~~~l~~e~~~~~  202 (366)
T KOG2686|consen  187 DKLEIEDLLLELSLFR  202 (366)
T ss_pred             chhhHHHHHHHHHHHH
Confidence            7788888999998863

>KOG4720|consensus Back     alignment and domain information
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase Back     alignment and domain information
>PTZ00296 choline kinase; Provisional Back     alignment and domain information
>PTZ00384 choline kinase; Provisional Back     alignment and domain information
>PLN02236 choline kinase Back     alignment and domain information
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2 Back     alignment and domain information
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes Back     alignment and domain information
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes Back     alignment and domain information
>TIGR02721 ycfN_thiK thiamine kinase Back     alignment and domain information
>cd05151 ChoK Choline Kinase (ChoK) Back     alignment and domain information
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins Back     alignment and domain information
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 Back     alignment and domain information
>cd05153 HomoserineK_II Homoserine Kinase, type II Back     alignment and domain information
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH) Back     alignment and domain information
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily Back     alignment and domain information
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members Back     alignment and domain information
>TIGR00938 thrB_alt homoserine kinase, Neisseria type Back     alignment and domain information
>PLN02876 acyl-CoA dehydrogenase Back     alignment and domain information
>PRK05231 homoserine kinase; Provisional Back     alignment and domain information
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family Back     alignment and domain information
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism] Back     alignment and domain information
>PRK11768 serine/threonine protein kinase; Provisional Back     alignment and domain information
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2') Back     alignment and domain information
>PRK10593 hypothetical protein; Provisional Back     alignment and domain information
>PRK09550 mtnK methylthioribose kinase; Reviewed Back     alignment and domain information
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only] Back     alignment and domain information
>PRK06148 hypothetical protein; Provisional Back     alignment and domain information
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only] Back     alignment and domain information
>TIGR02906 spore_CotS spore coat protein, CotS family Back     alignment and domain information
>PLN02756 S-methyl-5-thioribose kinase Back     alignment and domain information
>PRK06149 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32 Back     alignment and domain information
>PRK12396 5-methylribose kinase; Reviewed Back     alignment and domain information
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein [] Back     alignment and domain information
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional Back     alignment and domain information
>TIGR02904 spore_ysxE spore coat protein YsxE Back     alignment and domain information
>TIGR01767 MTRK 5-methylthioribose kinase Back     alignment and domain information
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed Back     alignment and domain information
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] Back     alignment and domain information
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin Back     alignment and domain information
>smart00090 RIO RIO-like kinase Back     alignment and domain information
>PLN00034 mitogen-activated protein kinase kinase; Provisional Back     alignment and domain information
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain Back     alignment and domain information
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase Back     alignment and domain information
>cd00180 PKc Catalytic domain of Protein Kinases Back     alignment and domain information
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases Back     alignment and domain information
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases Back     alignment and domain information
>KOG3087|consensus Back     alignment and domain information
>cd05119 RIO RIO kinase family, catalytic domain Back     alignment and domain information
>PTZ00384 choline kinase; Provisional Back     alignment and domain information
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin Back     alignment and domain information
>PTZ00296 choline kinase; Provisional Back     alignment and domain information
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes Back     alignment and domain information
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms] Back     alignment and domain information
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain Back     alignment and domain information
>PRK10271 thiK thiamine kinase; Provisional Back     alignment and domain information
>PRK09188 serine/threonine protein kinase; Provisional Back     alignment and domain information
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 Back     alignment and domain information
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain Back     alignment and domain information
>PRK14879 serine/threonine protein kinase; Provisional Back     alignment and domain information
>PLN02236 choline kinase Back     alignment and domain information
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties [] Back     alignment and domain information
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase Back     alignment and domain information
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 Back     alignment and domain information
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon Back     alignment and domain information
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases Back     alignment and domain information
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases Back     alignment and domain information
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases Back     alignment and domain information
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases Back     alignment and domain information
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 Back     alignment and domain information
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases Back     alignment and domain information
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases Back     alignment and domain information
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases Back     alignment and domain information
>PRK12274 serine/threonine protein kinase; Provisional Back     alignment and domain information
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain Back     alignment and domain information
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C Back     alignment and domain information
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C Back     alignment and domain information
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query256
3lq3_A 401 Crystal Structure Of Human Choline Kinase Beta In C 2e-27
3feg_A 379 Crystal Structure Of Human Choline Kinase Beta In C 2e-27
1nw1_A 429 Crystal Structure Of Choline Kinase Length = 429 9e-26
3f2r_A 401 Crystal Structure Of Human Choline Kinase Alpha In 1e-25
2i7q_A 402 Crystal Structure Of Human Choline Kinase A Length 1e-25
3zm9_A 383 The Mechanism Of Allosteric Coupling In Choline Kin 1e-25
2ig7_A 401 Crystal Structure Of Human Choline Kinase B Length 3e-25
2cko_A 390 Crystal Structure Of Human Choline Kinase Alpha 2 L 5e-25
3c5i_A 369 Crystal Structure Of Plasmodium Knowlesi Choline Ki 3e-08
3mes_A 424 Crystal Structure Of Choline Kinase From Cryptospor 1e-05
3fi8_A 362 Crystal Structure Of Choline Kinase From Plasmodium 8e-05
2qg7_A 458 Plasmodium Vivax Ethanolamine Kinase Pv091845 Lengt 1e-04
>pdb|3LQ3|A Chain A, Crystal Structure Of Human Choline Kinase Beta In Complex With Phosphorylated Hemicholinium-3 And Adenosine Nucleotide Length = 401 Back     alignment and structure 
Iteration: 1

 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/137 (43%), Positives = 90/137 (65%), Gaps = 10/137 (7%)
Query: 75  IFTLLGGLTNMLYHVTLLQ--PIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSE 132
           ++ + GGL+N+L+  +L    P    EP EVLLR+YG     + ++S++ +SV+F +L+E
Sbjct: 77  VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL--QGVDSLVLESVMFAILAE 134
Query: 133 RKLGPTLHGVFPGGRIEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHLMQIPVV 192
           R LGP L+GVFP GR+E+YIP      +R LK  EL +P +S  IA KMA  H M++P  
Sbjct: 135 RSLGPQLYGVFPEGRLEQYIP------SRPLKTQELREPVLSAAIATKMAQFHGMEMPFT 188
Query: 193 KEPTWLWDTIQRWLNTL 209
           KEP WL+ T++R+L  +
Sbjct: 189 KEPHWLFGTMERYLKQI 205
>pdb|3FEG|A Chain A, Crystal Structure Of Human Choline Kinase Beta In Complex With Phosphorylated Hemicholinium-3 And Adenosine Nucleotide Length = 379 Back     alignment and structure
>pdb|1NW1|A Chain A, Crystal Structure Of Choline Kinase Length = 429 Back     alignment and structure
>pdb|3F2R|A Chain A, Crystal Structure Of Human Choline Kinase Alpha In Complex With Hemicholinium-3 Length = 401 Back     alignment and structure
>pdb|2I7Q|A Chain A, Crystal Structure Of Human Choline Kinase A Length = 402 Back     alignment and structure
>pdb|3ZM9|A Chain A, The Mechanism Of Allosteric Coupling In Choline Kinase A1 Revealed By A Rationally Designed Inhibitor Length = 383 Back     alignment and structure
>pdb|2IG7|A Chain A, Crystal Structure Of Human Choline Kinase B Length = 401 Back     alignment and structure
>pdb|2CKO|A Chain A, Crystal Structure Of Human Choline Kinase Alpha 2 Length = 390 Back     alignment and structure
>pdb|3C5I|A Chain A, Crystal Structure Of Plasmodium Knowlesi Choline Kinase, Pkh_134520 Length = 369 Back     alignment and structure
>pdb|3MES|A Chain A, Crystal Structure Of Choline Kinase From Cryptosporidium Parvum Iowa Ii, Cgd3_2030 Length = 424 Back     alignment and structure
>pdb|3FI8|A Chain A, Crystal Structure Of Choline Kinase From Plasmodium Falciparum, Pf14_0020 Length = 362 Back     alignment and structure
>pdb|2QG7|A Chain A, Plasmodium Vivax Ethanolamine Kinase Pv091845 Length = 458 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query256
1nw1_A 429 Choline kinase (49.2 KD); phospholipid synthesis, 4e-31
3f2s_A 401 CK, chetk-alpha, choline kinase alpha; non-protein 2e-29
3feg_A 379 Choline/ethanolamine kinase; non-protein kinase, c 4e-28
3mes_A 424 Choline kinase; malaria, structural genomics, stru 2e-22
3c5i_A 369 Choline kinase; choline, kinase, malaria, transfer 3e-21
2qg7_A 458 Ethanolamine kinase PV091845; malaria, SGC, struct 4e-19
3dxq_A 301 Choline/ethanolamine kinase family protein; NP_106 2e-15
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 Length = 429 Back     alignment and structure
 Score =  118 bits (296), Expect = 4e-31
 Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 58/208 (27%)

Query: 2   ALGICKGYLHGAWKRITAKDICVKRMSGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTH 61
           A  +C  +L GAWK +  + + + R+ GG++NML+   L +                   
Sbjct: 56  AHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRN------------ 103

Query: 62  GERALESIITDSVIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESII 121
                                                EP++VLLR+Y     E     ++
Sbjct: 104 -------------------------------------EPNKVLLRVYFNPETE---SHLV 123

Query: 122 TDSVIFTLLSERKLGPTLHGVFPGGRIEEYIPDKETRKARSLKYSELTDPAISRKIAEKM 181
            +SVIFTLLSER LGP L+G+F GGR+EEYIP      +R L   E++   +S KIA+++
Sbjct: 124 AESVIFTLLSERHLGPKLYGIFSGGRLEEYIP------SRPLSCHEISLAHMSTKIAKRV 177

Query: 182 ADIHLMQIPVVKEPTWLWDTIQRWLNTL 209
           A +H +++P+ KEP +L + +QRWL  L
Sbjct: 178 AKVHQLEVPIWKEPDYLCEALQRWLKQL 205
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* Length = 379 Back     alignment and structure
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} Length = 424 Back     alignment and structure
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* Length = 369 Back     alignment and structure
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} Length = 458 Back     alignment and structure
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} Length = 301 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query256
3g15_A 401 CK, chetk-alpha, choline kinase alpha; non-protein 100.0
3f2s_A 401 CK, chetk-alpha, choline kinase alpha; non-protein 100.0
3feg_A 379 Choline/ethanolamine kinase; non-protein kinase, c 99.96
3mes_A 424 Choline kinase; malaria, structural genomics, stru 99.93
1nw1_A 429 Choline kinase (49.2 KD); phospholipid synthesis, 99.91
2qg7_A 458 Ethanolamine kinase PV091845; malaria, SGC, struct 99.89
3c5i_A 369 Choline kinase; choline, kinase, malaria, transfer 99.83
3dxq_A 301 Choline/ethanolamine kinase family protein; NP_106 99.67
1nd4_A264 Aminoglycoside 3'-phosphotransferase; protein kina 98.73
3dxp_A 359 Putative acyl-COA dehydrogenase; protein kinase-li 98.62
3ats_A 357 Putative uncharacterized protein; hypothetical pro 98.49
2ppq_A 322 HSK, HK, homoserine kinase; structural genomics, M 98.41
2q83_A 346 YTAA protein; 2635576, structural genomics, joint 98.24
3r70_A 320 Aminoglycoside phosphotransferase; structural geno 98.2
3ovc_A 362 Hygromycin-B 4-O-kinase; aminoglycoside phosphotra 98.14
1zyl_A 328 Hypothetical protein YIHE; putative protein kinase 98.11
3i1a_A 339 Spectinomycin phosphotransferase; protein kinase, 98.02
3d1u_A 288 Putative fructosamine-3-kinase; YP_290396.1, struc 98.0
3tm0_A263 Aminoglycoside 3'-phosphotransferase; protein kina 97.93
3jr1_A 312 Putative fructosamine-3-kinase; YP_719053.1, struc 97.75
3tdw_A 306 Gentamicin resistance protein; kinase, phosphoryl 97.64
3csv_A 333 Aminoglycoside phosphotransferase; YP_614837.1, ph 97.51
3f7w_A 288 Putative fructosamine-3-kinase; YP_290396.1, struc 97.5
2olc_A 397 MTR kinase, methylthioribose kinase; kinase ADP-2H 97.47
3sg8_A 304 APH(2'')-ID; antibiotic resistance enzyme, transfe 97.41
2pyw_A 420 Uncharacterized protein; 5-methylthioribose kinase 97.28
4gkh_A272 Aminoglycoside 3'-phosphotransferase APHA1-IAB; py 96.95
3g15_A 401 CK, chetk-alpha, choline kinase alpha; non-protein 90.68
1rjb_A344 FL cytokine receptor; kinase, structure, autoinhib 88.99
2x7f_A 326 TRAF2 and NCK-interacting protein kinase; serine/t 87.34
3f2s_A 401 CK, chetk-alpha, choline kinase alpha; non-protein 87.22
1t46_A313 HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom 85.25
1zth_A258 RIO1 serine protein kinase; ribosome biogenesis, r 84.84
2xir_A316 Vascular endothelial growth factor receptor 2; ang 83.09
2izr_A 330 Casein kinase I isoform gamma-3; serine/threonine- 81.34
3nsz_A 330 CK II alpha, casein kinase II subunit alpha; inhib 81.13
3tki_A 323 Serine/threonine-protein kinase CHK1; cell checkpo 80.97
1csn_A 298 Casein kinase-1; phosphotransferase; HET: ATP; 2.0 80.96
3kfa_A288 Tyrosine-protein kinase ABL1; CML, drug resistance 80.85
2i1m_A333 Macrophage colony-stimulating factor 1 receptor; k 80.58
1luf_A343 Muscle-specific tyrosine kinase receptor MUSK; pho 80.56
3a7i_A303 MST3 kinase, serine/threonine kinase 24 (STE20 hom 80.56
3vhe_A 359 Vascular endothelial growth factor receptor 2; kin 80.49
2qr7_A 342 Ribosomal protein S6 kinase alpha-3; kinase domain 80.49
2ac3_A 316 MAP kinase-interacting serine/threonine kinase 2; 80.29
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A* Back     alignment and structure
Probab=100.00  E-value=2e-33  Score=263.48  Aligned_cols=153  Identities=41%  Similarity=0.787  Sum_probs=131.9

Q ss_pred             CHhhhHhhhcCCcCcccCCCcEEEEEeccceeeeeEEEEecCCCCCCChhHHHHhhhcccccccccccccccceEEeecC
Q psy15662          1 MALGICKGYLHGAWKRITAKDICVKRMSGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLG   80 (256)
Q Consensus         1 ~~~~ic~~~l~~~W~~v~~~~i~v~~isggltN~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~i~~l~G   80 (256)
                      +|..+||+||+|+|++|++++|+|++++||+||.+|+|+.|+.....                                 
T Consensus        34 ~a~~~c~~~l~g~W~~v~~~~l~v~~lsGG~SN~~y~v~~~~~~~~~---------------------------------   80 (401)
T 3g15_A           34 RAYLWCKEFLPGAWRGLREDEFHISVIRGGLSNMLFQCSLPDTTATL---------------------------------   80 (401)
T ss_dssp             HHHHHHHHHSCGGGTTCCGGGCEEEEEECSSEEEEEEEECCTTCCCS---------------------------------
T ss_pred             HHHHHHHHhCCccccCCCcCCEEEEEeCCccccceEEEEECCCCccc---------------------------------
Confidence            47889999999999999999999999999999999999987644320                                 


Q ss_pred             ccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHH-------------------HHHHHHHHHHhcCCCCceeE
Q psy15662         81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESII-------------------TDSVIFTLLSERKLGPTLHG  141 (256)
Q Consensus        81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~-------------------~E~~i~~~Ls~~glgPkl~g  141 (256)
                                      ...+++|||||||+++  ...++|.                   .|..++..|++.|+||++++
T Consensus        81 ----------------~~~~~~~llRi~g~~~--~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~ls~~g~~p~l~~  142 (401)
T 3g15_A           81 ----------------GDEPRKVLLRLYGAIL--QMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGPKLYG  142 (401)
T ss_dssp             ----------------SSCCSEEEEEEEEC-------------------------CHHHHHHHHHHHHHHHTTSSCCEEE
T ss_pred             ----------------ccCCCeEEEEeCCCCc--cchhhhhHHHHHHHHHHhccCCCCCcchhHHHHHHHhCCCCCEEEE
Confidence                            2457899999999998  5777776                   37788999999999999999


Q ss_pred             eeCCeEEEEeecCCCCCccccCCCCCCCChHHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhh
Q psy15662        142 VFPGGRIEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHLMQIPVVKEPTWLWDTIQRWLNTLY  210 (256)
Q Consensus       142 ~F~nGrIEefi~~~~~~~gr~Lt~~el~dp~i~~~IA~~La~lH~~~ip~~k~P~~l~~~i~kwl~~l~  210 (256)
                      +|+||||++|++      |++|++++++++.++..||++|++||.++.|..+.+.++|..+.+|++.+.
T Consensus       143 ~f~~g~i~e~i~------g~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~  205 (401)
T 3g15_A          143 IFPQGRLEQFIP------SRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVL  205 (401)
T ss_dssp             EETTEEEEECCC------EEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHH
T ss_pred             EECCcEEEEecC------CCcCChhhhcCHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHH
Confidence            999999999999      999999999999999999999999999999998888789999999999875
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* Back     alignment and structure
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} Back     alignment and structure
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 Back     alignment and structure
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} Back     alignment and structure
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* Back     alignment and structure
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} Back     alignment and structure
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 Back     alignment and structure
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} Back     alignment and structure
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* Back     alignment and structure
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 Back     alignment and structure
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} Back     alignment and structure
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 Back     alignment and structure
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* Back     alignment and structure
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* Back     alignment and structure
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} Back     alignment and structure
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* Back     alignment and structure
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} Back     alignment and structure
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} Back     alignment and structure
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* Back     alignment and structure
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A Back     alignment and structure
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} Back     alignment and structure
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* Back     alignment and structure
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A* Back     alignment and structure
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Back     alignment and structure
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Back     alignment and structure
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Back     alignment and structure
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* Back     alignment and structure
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Back     alignment and structure
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Back     alignment and structure
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... Back     alignment and structure
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Back     alignment and structure
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Back     alignment and structure
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Back     alignment and structure
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Back     alignment and structure
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Back     alignment and structure
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Back     alignment and structure
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* Back     alignment and structure
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Back     alignment and structure
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 256
d1nw1a_ 395 d.144.1.8 (A:) Choline kinase {Caenorhabditis eleg 1e-27
>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} Length = 395 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  107 bits (267), Expect = 1e-27
 Identities = 76/256 (29%), Positives = 115/256 (44%), Gaps = 71/256 (27%)

Query: 1   MALGICKGYLHGAWKRITAKDICVKRMSGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQT 60
            A  +C  +L GAWK +  + + + R+ GG++NML+   L      SE    +       
Sbjct: 24  RAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRL------SEVYPPIRN----- 72

Query: 61  HGERALESIITDSVIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESI 120
                                                 EP++VLLR+Y     E  L   
Sbjct: 73  --------------------------------------EPNKVLLRVYFNPETESHLV-- 92

Query: 121 ITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIPDKETRKARSLKYSELTDPAISRKIAEK 180
             +SVIFTLLSER LGP L+G+F GGR+EEYIP      +R L   E++   +S KIA++
Sbjct: 93  -AESVIFTLLSERHLGPKLYGIFSGGRLEEYIP------SRPLSCHEISLAHMSTKIAKR 145

Query: 181 MADIHLMQIPVVKEPTWLWDTIQRWLNTLYLKNTGGNGTAEWRNGETLATECHKKNKIQM 240
           +A +H +++P+ KEP +L + +QRWL  L      G   AE R             +  +
Sbjct: 146 VAKVHQLEVPIWKEPDYLCEALQRWLKQL-----TGTVDAEHRF--------DLPEECGV 192

Query: 241 KKILSKDLNTEADWLK 256
             +   DL  E ++L+
Sbjct: 193 SSVNCLDLARELEFLR 208

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query256
d1nw1a_ 395 Choline kinase {Caenorhabditis elegans [TaxId: 623 99.98
d1nd4a_255 Aminoglycoside 3'-phosphotransferase IIa (Kanamyci 98.6
d1j7la_263 Type IIIa 3',5"-aminoglycoside phosphotransferase 98.37
d2pula1 392 Methylthioribose kinase MtnK {Bacillus subtilis [T 97.98
d1zyla1 325 RdoA {Escherichia coli [TaxId: 562]} 97.3
d2ppqa1 316 Homoserine kinase ThrB {Agrobacterium tumefaciens 97.3
d1nw1a_ 395 Choline kinase {Caenorhabditis elegans [TaxId: 623 88.97
d1zara2191 Rio2 serine protein kinase C-terminal domain {Arch 84.19
>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.98  E-value=1.7e-32  Score=253.51  Aligned_cols=151  Identities=42%  Similarity=0.818  Sum_probs=138.2

Q ss_pred             HhhhHhhhcCCcCcccCCCcEEEEEeccceeeeeEEEEecCCCCCCChhHHHHhhhcccccccccccccccceEEeecCc
Q psy15662          2 ALGICKGYLHGAWKRITAKDICVKRMSGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLGG   81 (256)
Q Consensus         2 ~~~ic~~~l~~~W~~v~~~~i~v~~isggltN~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~i~~l~GG   81 (256)
                      |+.||++||+|.|+++++++|+|++++||+||.+|.|+.++...+.                                  
T Consensus        25 ~~~~~~~~l~~~W~~~~~~~l~v~~l~GGltN~~y~v~~~~~~~~~----------------------------------   70 (395)
T d1nw1a_          25 AHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPI----------------------------------   70 (395)
T ss_dssp             HHHHHHHHHCTHHHHCCGGGEEEEEECCCTTEEEEEEEECTTSCCS----------------------------------
T ss_pred             HHHHHHHhCcccccCCCccceEEEEcCCccccceEEEEeCCCCccc----------------------------------
Confidence            7889999999999999999999999999999999999987654321                                  


Q ss_pred             cccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCCeEEEEeecCCCCCccc
Q psy15662         82 LTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIPDKETRKAR  161 (256)
Q Consensus        82 lTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~nGrIEefi~~~~~~~gr  161 (256)
                                     ...++.||+||||. +  +..+||.+|..+++.|+++|++|++|++|+||+|++||+      |+
T Consensus        71 ---------------~~~~~~vllRi~g~-~--~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~g~I~efi~------g~  126 (395)
T d1nw1a_          71 ---------------RNEPNKVLLRVYFN-P--ETESHLVAESVIFTLLSERHLGPKLYGIFSGGRLEEYIP------SR  126 (395)
T ss_dssp             ---------------SSCCSEEEEEEECS-C--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETTEEEECCCC------EE
T ss_pred             ---------------cCCCCcEEEEecCC-c--chhhHHHHHHHHHHHHHhCCCCCeEEEEcCCceEEEEec------cc
Confidence                           24578999999995 5  477899999999999999999999999999999999999      99


Q ss_pred             cCCCCCCCChHHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhh
Q psy15662        162 SLKYSELTDPAISRKIAEKMADIHLMQIPVVKEPTWLWDTIQRWLNTLY  210 (256)
Q Consensus       162 ~Lt~~el~dp~i~~~IA~~La~lH~~~ip~~k~P~~l~~~i~kwl~~l~  210 (256)
                      +++..++.+|.+++.||+.|++||.+.+|..+.+..+|+.+.+|++++.
T Consensus       127 ~l~~~d~~~~~~~~~iA~~La~lH~~~~~~~~~~~~~~~~i~~~l~~~~  175 (395)
T d1nw1a_         127 PLSCHEISLAHMSTKIAKRVAKVHQLEVPIWKEPDYLCEALQRWLKQLT  175 (395)
T ss_dssp             ECCTTGGGSHHHHHHHHHHHHHHTTCCCSSCCSSCHHHHHHHHHHHHHH
T ss_pred             cCChhhccchhhhHHHHHHHHHHhhcccccccCcchHHHHHHHHHHhhh
Confidence            9999999999999999999999999998888776689999999999885
>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} Back     information, alignment and structure
>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure