Psyllid ID: psy15683

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300----
MKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGKTLVSVTKEGLELPEDEEEKKKREEDKVKFENLCKVMKDILDKKVEKVIVSNRLVDSPCCIVTSQYGWTANMERIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQKADADKNDKAVKDLVNLLFETSLLSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEVATGDDVKAGDIPVAEGEAEDASRMEEAVKDLVNLLFETSLLSSGFTLEEPQVLAARIHRMIKLGLGIEDEDEVLVMMSRREIF
cccccccEEEEEcccHHHHHccHHHHHHHHcccEEEEccccHHHHHHHcccccccccccEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccccEEEEEccccccHHHHHHHHHHcccccccccccccccEEEcccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccccccHHHHcccccccc
ccccccEEEEEEcccHHHHcccHHHHHHHHcccEEEEEEccHHHHHHHHHHHccccEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccccccEEEEEccccccHHHHHHHHHHHHHccccHHHHHHccEEEEccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccccHHHcccccHHHcc
MKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGKTLVSVTKeglelpedeeeKKKREEDKVKFENLCKVMKDILDKKVEKVIVSnrlvdspccivtsqygwTANMERIMKAQALRDTSTMGYMAAKKhleinpdhsIVETLRQKADADKNDKAVKDLVNLLFETsllssgftleepqVHAARIHRMIKLglgiededevatgddvkagdipvaegeaedASRMEEAVKDLVNLLFETsllssgftleePQVLAARIHRMIKLglgiededEVLVMMSRREIF
MKENQKQIYyitgetkdqvanssfVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGKTLVSVtkeglelpedeeekkkreedkvkfenLCKVMKDILDKKVEKVivsnrlvdspccivtsqygwtanMERIMKAQALRDTSTMGYMAAKKhleinpdhsIVETLRQKADADKNDKAVKDLVNLLFEtsllssgftleePQVHAARIHRMIKLGLGIEDEDEVATGDDVKAGDIPVAEGEAEDASRMEEAVKDLVNLLFETsllssgftleEPQVLAARIHRMIKlglgiededevlVMMSRREIF
MKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGKTLVSVTkeglelpedeeekkkreedkvkfeNLCKVMKDILDKKVEKVIVSNRLVDSPCCIVTSQYGWTANMERIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQkadadkndkavkdLVNLLFETSLLSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEVATGDDVKAGDIPVAEGEAEDASRMEEAVKDLVNLLFETSLLSSGFTLEEPQVLAARIHRMIKLGLGIEDEDEVLVMMSRREIF
*******IYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGKTLVSV**********************KFENLCKVMKDILDKKVEKVIVSNRLVDSPCCIVTSQYGWTANMERIMKAQALRDTSTMGYMAAKKHLEIN****IV**************AVKDLVNLLFETSLLSSGFTLEEPQVHAARIHRMIKLGLGIED*******************************VKDLVNLLFETSLLSSGFTLEEPQVLAARIHRMIKLGLGIEDEDEVLV********
**ENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGKTLVSVTKEGLE*******************NLCKVMKDILDKKVEKVIVSNRLVDSPCCIVTSQYGWTANMERIMKA***************KHLEINPDHSIVETLRQKAD**KNDKAVKDLVNLLFETSLLSSGFTLEEPQVHAARIHRMIKLGLGIEDE********************************DLVNLLFETSLLSSGFTLEEPQVLAARIHRMIKLGLGIEDE*************
MKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGKTLVSVTKEG***************DKVKFENLCKVMKDILDKKVEKVIVSNRLVDSPCCIVTSQYGWTANMERIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQKADADKNDKAVKDLVNLLFETSLLSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEVATGDDVKAGDIPVAE********MEEAVKDLVNLLFETSLLSSGFTLEEPQVLAARIHRMIKLGLGIEDEDEVLVMMSRREIF
***NQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGKTLVSVTKEGLELPEDEEEKKKREEDKVKFENLCKVMKDILDKKVEKVIVSNRLVDSPCCIVTSQYGWTANMERIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQKADADKNDKAVKDLVNLLFETSLLSSGFTLEEPQVHAARIHRMIKLGLGIE**************************SRMEEAVKDLVNLLFETSLLSSGFTLEEPQVLAARIHRMIKLGLGIEDE*************
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MKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGKTLVSVTKEGLELPEDEEEKKKREEDKVKFENLCKVMKDILDKKVEKVIVSNRLVDSPCCIVTSQYGWTANMERIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQKADADKNDKAVKDLVNLLFETSLLSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEVATGDDVKAGDIPVAEGEAEDASRMEEAVKDLVNLLFETSLLSSGFTLEEPQVLAARIHRMIKLGLGIEDEDEVLVMMSRREIF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query304 2.2.26 [Sep-21-2011]
P02828717 Heat shock protein 83 OS= yes N/A 0.809 0.343 0.806 1e-114
O02192716 Heat shock protein 83 OS= N/A N/A 0.802 0.340 0.785 1e-113
P04809717 Heat shock protein 83 OS= yes N/A 0.802 0.340 0.785 1e-112
O57521725 Heat shock protein HSP 90 yes N/A 0.809 0.339 0.792 1e-112
Q04619725 Heat shock cognate protei yes N/A 0.809 0.339 0.786 1e-110
Q90474725 Heat shock protein HSP 90 no N/A 0.809 0.339 0.782 1e-108
Q7PT10720 Heat shock protein 83 OS= yes N/A 0.730 0.308 0.838 1e-108
P30946694 Heat shock protein HSP 90 yes N/A 0.756 0.331 0.74 1e-102
Q4R4T5724 Heat shock protein HSP 90 N/A N/A 0.805 0.338 0.811 1e-100
Q9GKX8724 Heat shock protein HSP 90 yes N/A 0.805 0.338 0.811 1e-100
>sp|P02828|HSP83_DROME Heat shock protein 83 OS=Drosophila melanogaster GN=Hsp83 PE=1 SV=1 Back     alignment and function desciption
 Score =  411 bits (1056), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 200/248 (80%), Positives = 221/248 (89%), Gaps = 2/248 (0%)

Query: 1   MKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGKTLVS 60
           MK+NQK +Y+ITGE+KDQV+NS+FVERVK RGFEV+YMTEPIDEYV+Q LK+Y GK LVS
Sbjct: 469 MKDNQKHVYFITGESKDQVSNSAFVERVKARGFEVVYMTEPIDEYVIQHLKEYKGKQLVS 528

Query: 61  VTKEGLELPEDEEEKKKREEDKVKFENLCKVMKDILDKKVEKVIVSNRLVDSPCCIVTSQ 120
           VTKEGLELPEDE EKKKREEDK KFE+LCK+MK ILD KVEKV+VSNRLVDSPCCIVTSQ
Sbjct: 529 VTKEGLELPEDESEKKKREEDKAKFESLCKLMKSILDNKVEKVVVSNRLVDSPCCIVTSQ 588

Query: 121 YGWTANMERIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQKADADKNDKAVKDLV 180
           +GW+ANMERIMKAQALRDT+TMGYMA KK LEINPDH IVETLRQKADADKNDKAVKDLV
Sbjct: 589 FGWSANMERIMKAQALRDTATMGYMAGKKQLEINPDHPIVETLRQKADADKNDKAVKDLV 648

Query: 181 NLLFETSLLSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEVATGDDVK-AGDIPVAEGEA 239
            LLFETSLLSSGF+L+ PQVHA+RI+RMIKLGLGI DEDE  T DD + AGD P    + 
Sbjct: 649 ILLFETSLLSSGFSLDSPQVHASRIYRMIKLGLGI-DEDEPMTTDDAQSAGDAPSLVEDT 707

Query: 240 EDASRMEE 247
           EDAS MEE
Sbjct: 708 EDASHMEE 715
Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co-chaperones that modulate its substrate recognition, ATPase cycle and chaperone function.
Drosophila melanogaster (taxid: 7227)
>sp|O02192|HSP83_DROAV Heat shock protein 83 OS=Drosophila auraria GN=Hsp83 PE=3 SV=1 Back     alignment and function description
>sp|P04809|HSP83_DROPS Heat shock protein 83 OS=Drosophila pseudoobscura pseudoobscura GN=Hsp83 PE=3 SV=2 Back     alignment and function description
>sp|O57521|HS90B_DANRE Heat shock protein HSP 90-beta OS=Danio rerio GN=hsp90ab1 PE=1 SV=2 Back     alignment and function description
>sp|Q04619|HS90B_CHICK Heat shock cognate protein HSP 90-beta OS=Gallus gallus GN=HSP90AB1 PE=2 SV=1 Back     alignment and function description
>sp|Q90474|H90A1_DANRE Heat shock protein HSP 90-alpha 1 OS=Danio rerio GN=hsp90a.1 PE=1 SV=3 Back     alignment and function description
>sp|Q7PT10|HSP83_ANOGA Heat shock protein 83 OS=Anopheles gambiae GN=Hsp83 PE=3 SV=3 Back     alignment and function description
>sp|P30946|HS90A_RABIT Heat shock protein HSP 90-alpha OS=Oryctolagus cuniculus GN=HSP90AA1 PE=1 SV=2 Back     alignment and function description
>sp|Q4R4T5|HS90B_MACFA Heat shock protein HSP 90-beta OS=Macaca fascicularis GN=Hsp90ab1 PE=2 SV=1 Back     alignment and function description
>sp|Q9GKX8|HS90B_HORSE Heat shock protein HSP 90-beta OS=Equus caballus GN=HSP90AB1 PE=2 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query304
307212671 723 Heat shock protein HSP 90-alpha [Harpegn 0.805 0.338 0.829 1e-117
292606981 730 heat shock protein 90 [Nilaparvata lugen 0.812 0.338 0.846 1e-117
328792331 755 PREDICTED: heat shock protein 83-like [A 0.805 0.324 0.825 1e-117
332021548 724 Heat shock protein 83 [Acromyrmex echina 0.805 0.338 0.821 1e-116
380022183 717 PREDICTED: heat shock protein 83-like [A 0.805 0.341 0.825 1e-116
157419936 723 heat shock protein 90 [Microplitis media 0.809 0.340 0.821 1e-115
195014312 712 GH16203 [Drosophila grimshawi] gi|193897 0.802 0.342 0.813 1e-114
427794259 763 Putative heat shock protein, partial [Rh 0.809 0.322 0.817 1e-114
442750725 731 Putative heat shock protein hsp 90-alpha 0.809 0.336 0.813 1e-114
195376387 716 heat shock protein 83 [Drosophila virili 0.802 0.340 0.805 1e-114
>gi|307212671|gb|EFN88374.1| Heat shock protein HSP 90-alpha [Harpegnathos saltator] Back     alignment and taxonomy information
 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 205/247 (82%), Positives = 230/247 (93%)

Query: 1   MKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGKTLVS 60
           MKENQK IYYITGE+++QVANSSFVERVKKRGFEV+YMTEPIDEYVVQQLK++DGK LVS
Sbjct: 475 MKENQKHIYYITGESREQVANSSFVERVKKRGFEVVYMTEPIDEYVVQQLKEFDGKQLVS 534

Query: 61  VTKEGLELPEDEEEKKKREEDKVKFENLCKVMKDILDKKVEKVIVSNRLVDSPCCIVTSQ 120
           VTKEGLELPEDE+EKKKREEDK KFENLCKVMKDILDKKVEKV+VSNRLVDSPCCIVTSQ
Sbjct: 535 VTKEGLELPEDEDEKKKREEDKAKFENLCKVMKDILDKKVEKVVVSNRLVDSPCCIVTSQ 594

Query: 121 YGWTANMERIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQKADADKNDKAVKDLV 180
           YGWTANMERIMKAQALRDTSTMGYMAAKKHLEINPDH I+E LRQKA+ADK+DK+VKDLV
Sbjct: 595 YGWTANMERIMKAQALRDTSTMGYMAAKKHLEINPDHPIMENLRQKAEADKHDKSVKDLV 654

Query: 181 NLLFETSLLSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEVATGDDVKAGDIPVAEGEAE 240
            LLFET+LLSSGF LE+PQVHA+RI+RMIKLGLG +D+D  +T D+    ++P  EG++E
Sbjct: 655 MLLFETALLSSGFALEDPQVHASRIYRMIKLGLGFDDDDVPSTEDEKMDTEVPPLEGDSE 714

Query: 241 DASRMEE 247
           +ASRMEE
Sbjct: 715 EASRMEE 721

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|292606981|gb|ADE34169.1| heat shock protein 90 [Nilaparvata lugens] Back     alignment and taxonomy information
>gi|328792331|ref|XP_395168.4| PREDICTED: heat shock protein 83-like [Apis mellifera] Back     alignment and taxonomy information
>gi|332021548|gb|EGI61913.1| Heat shock protein 83 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|380022183|ref|XP_003694932.1| PREDICTED: heat shock protein 83-like [Apis florea] Back     alignment and taxonomy information
>gi|157419936|gb|ABV55506.1| heat shock protein 90 [Microplitis mediator] Back     alignment and taxonomy information
>gi|195014312|ref|XP_001984000.1| GH16203 [Drosophila grimshawi] gi|193897482|gb|EDV96348.1| GH16203 [Drosophila grimshawi] Back     alignment and taxonomy information
>gi|427794259|gb|JAA62581.1| Putative heat shock protein, partial [Rhipicephalus pulchellus] Back     alignment and taxonomy information
>gi|442750725|gb|JAA67522.1| Putative heat shock protein hsp 90-alpha isoform 1 [Ixodes ricinus] Back     alignment and taxonomy information
>gi|195376387|ref|XP_002046978.1| heat shock protein 83 [Drosophila virilis] gi|194154136|gb|EDW69320.1| heat shock protein 83 [Drosophila virilis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query304
UNIPROTKB|E2RLS3724 SLC29A1 "Uncharacterized prote 0.805 0.338 0.678 5.2e-81
UNIPROTKB|Q9GKX8724 HSP90AB1 "Heat shock protein H 0.805 0.338 0.678 5.2e-81
UNIPROTKB|P08238724 HSP90AB1 "Heat shock protein H 0.805 0.338 0.678 6.6e-81
UNIPROTKB|P07900732 HSP90AA1 "Heat shock protein H 0.802 0.333 0.664 8.5e-81
UNIPROTKB|G5E507724 HSP90AB1 "Heat shock protein H 0.802 0.337 0.676 1.1e-80
UNIPROTKB|Q76LV1724 HSP90AB1 "Heat shock protein H 0.802 0.337 0.676 1.1e-80
UNIPROTKB|F1RQU2724 HSP90AB1 "Uncharacterized prot 0.802 0.337 0.676 1.1e-80
MGI|MGI:96247724 Hsp90ab1 "heat shock protein 9 0.802 0.337 0.676 1.1e-80
RGD|1303075724 Hsp90ab1 "heat shock protein 9 0.802 0.337 0.676 1.1e-80
UNIPROTKB|Q76LV2733 HSP90AA1 "Heat shock protein H 0.802 0.332 0.664 1.4e-80
UNIPROTKB|E2RLS3 SLC29A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
 Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
 Identities = 169/249 (67%), Positives = 188/249 (75%)

Query:     1 MKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGKTLVS 60
             MKE QK IYYITGE+K+QVANS+FVERV+KRGFEV+YMTEPIDEY VQQLK++DGK+LVS
Sbjct:   476 MKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVS 535

Query:    61 VTXXXXXXXXXXXXXXXXXXXXXXXXNLCKVMKDILDKKVEKVIVSNRLVDSPCCIVTSQ 120
             VT                        NLCK+MK+ILDKKVEKV +SNRLV SPCCIVTS 
Sbjct:   536 VTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTST 595

Query:   121 YGWTANMERIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQXXXXXXXXXXXXXLV 180
             YGWTANMERIMKAQALRD STMGYM AKKHLEINPDH IVETLRQ             LV
Sbjct:   596 YGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLV 655

Query:   181 NLLFETSLLSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEVATGDDVKA--GDIPVAEGE 238
              LLFET+LLSSGF+LE+PQ H+ RI+RMIKLGLGI DEDEVA  +   A   +IP  EG+
Sbjct:   656 VLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGI-DEDEVAAEEPSAAVPDEIPPLEGD 714

Query:   239 AEDASRMEE 247
              EDASRMEE
Sbjct:   715 -EDASRMEE 722
GO:0051082 "unfolded protein binding" evidence=IEA
GO:0006950 "response to stress" evidence=IEA
GO:0006457 "protein folding" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
UNIPROTKB|Q9GKX8 HSP90AB1 "Heat shock protein HSP 90-beta" [Equus caballus (taxid:9796)] Back     alignment and assigned GO terms
UNIPROTKB|P08238 HSP90AB1 "Heat shock protein HSP 90-beta" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P07900 HSP90AA1 "Heat shock protein HSP 90-alpha" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|G5E507 HSP90AB1 "Heat shock protein HSP 90-beta" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q76LV1 HSP90AB1 "Heat shock protein HSP 90-beta" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1RQU2 HSP90AB1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:96247 Hsp90ab1 "heat shock protein 90 alpha (cytosolic), class B member 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1303075 Hsp90ab1 "heat shock protein 90 alpha (cytosolic), class B member 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q76LV2 HSP90AA1 "Heat shock protein HSP 90-alpha" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P24724HSP90_THEPANo assigned EC number0.54770.79270.3342yesN/A
P02828HSP83_DROMENo assigned EC number0.80640.80920.3430yesN/A
Q5R710HS90B_PONABNo assigned EC number0.80720.80590.3383yesN/A
P41887HSP90_SCHPONo assigned EC number0.54410.70390.3039yesN/A
Q7PT10HSP83_ANOGANo assigned EC number0.83850.73020.3083yesN/A
Q69QQ6HSP82_ORYSJNo assigned EC number0.63960.79270.3447yesN/A
Q25293HSP83_LEIINNo assigned EC number0.58790.71050.3081yesN/A
Q4UDU8HSP90_THEANNo assigned EC number0.55600.79270.3337yesN/A
Q9GKX8HS90B_HORSENo assigned EC number0.81120.80590.3383yesN/A
P08238HS90B_HUMANNo assigned EC number0.81120.80590.3383yesN/A
Q0J4P2HSP81_ORYSJNo assigned EC number0.63560.79270.3447yesN/A
P27323HS901_ARATHNo assigned EC number0.64910.79600.3457yesN/A
Q07078HSP83_ORYSJNo assigned EC number0.63560.79270.3447yesN/A
O57521HS90B_DANRENo assigned EC number0.7920.80920.3393yesN/A
P54651HSC90_DICDINo assigned EC number0.59430.79930.3471yesN/A
P34058HS90B_RATNo assigned EC number0.80720.80590.3383yesN/A
P11499HS90B_MOUSENo assigned EC number0.80720.80590.3383yesN/A
Q76LV1HS90B_BOVINNo assigned EC number0.80720.80590.3383yesN/A
Q04619HS90B_CHICKNo assigned EC number0.78620.80920.3393yesN/A
Q18688HSP90_CAEELNo assigned EC number0.74010.78940.3418yesN/A
P04809HSP83_DROPSNo assigned EC number0.78540.80260.3403yesN/A
P30946HS90A_RABITNo assigned EC number0.740.75650.3314yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query304
pfam00183529 pfam00183, HSP90, Hsp90 protein 1e-125
PTZ00272701 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp 6e-86
PRK05218613 PRK05218, PRK05218, heat shock protein 90; Provisi 1e-64
COG0326623 COG0326, HtpG, Molecular chaperone, HSP90 family [ 2e-59
PTZ00130814 PTZ00130, PTZ00130, heat shock protein 90; Provisi 6e-34
pfam00183529 pfam00183, HSP90, Hsp90 protein 1e-13
PTZ00272701 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp 4e-12
COG0326623 COG0326, HtpG, Molecular chaperone, HSP90 family [ 7e-04
>gnl|CDD|215774 pfam00183, HSP90, Hsp90 protein Back     alignment and domain information 
 Score =  367 bits (943), Expect = e-125
 Identities = 159/247 (64%), Positives = 200/247 (80%)

Query: 1   MKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGKTLVS 60
           MKE QK IYYITGE+K QV  S F+ER+KK+G+EV+YMT+PIDEY +QQLK+++GK LV+
Sbjct: 281 MKEGQKDIYYITGESKKQVEKSPFLERLKKKGYEVLYMTDPIDEYAMQQLKEFEGKKLVN 340

Query: 61  VTKEGLELPEDEEEKKKREEDKVKFENLCKVMKDILDKKVEKVIVSNRLVDSPCCIVTSQ 120
           VTKEGL+L E EEEKKKREE K +FE LCK MKDIL  KVEKV+VSNRLVDSPC +VTSQ
Sbjct: 341 VTKEGLKLEESEEEKKKREELKKEFEELCKWMKDILGDKVEKVVVSNRLVDSPCALVTSQ 400

Query: 121 YGWTANMERIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQKADADKNDKAVKDLV 180
           YGW+ANMERIMKAQALRD+S   YM++KK LEINP H I++ LR++ +ADKNDK VKDL 
Sbjct: 401 YGWSANMERIMKAQALRDSSMSAYMSSKKTLEINPRHPIIKELRKRVEADKNDKTVKDLA 460

Query: 181 NLLFETSLLSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEVATGDDVKAGDIPVAEGEAE 240
            LL+ET+LL+SGF+LE+P+  A+RI+RMIKLGL I++++EV   D+    +      E  
Sbjct: 461 RLLYETALLTSGFSLEDPKAFASRIYRMIKLGLSIDEDEEVEEEDEEAEVETTEPAEEDA 520

Query: 241 DASRMEE 247
           + S+MEE
Sbjct: 521 EDSKMEE 527

Length = 529
>gnl|CDD|240341 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp83); Provisional Back     alignment and domain information
>gnl|CDD|235366 PRK05218, PRK05218, heat shock protein 90; Provisional Back     alignment and domain information
>gnl|CDD|223403 COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|185466 PTZ00130, PTZ00130, heat shock protein 90; Provisional Back     alignment and domain information
>gnl|CDD|215774 pfam00183, HSP90, Hsp90 protein Back     alignment and domain information
>gnl|CDD|240341 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp83); Provisional Back     alignment and domain information
>gnl|CDD|223403 COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 304
PF00183531 HSP90: Hsp90 protein; InterPro: IPR001404 Molecula 100.0
KOG0019|consensus656 100.0
PTZ00272701 heat shock protein 83 kDa (Hsp83); Provisional 100.0
KOG0020|consensus785 100.0
PTZ00130814 heat shock protein 90; Provisional 100.0
COG0326623 HtpG Molecular chaperone, HSP90 family [Posttransl 100.0
PRK05218613 heat shock protein 90; Provisional 100.0
PRK14083601 HSP90 family protein; Provisional 100.0
KOG0019|consensus656 99.45
PF00183531 HSP90: Hsp90 protein; InterPro: IPR001404 Molecula 99.34
KOG0020|consensus785 99.31
PTZ00130814 heat shock protein 90; Provisional 99.21
PTZ00272701 heat shock protein 83 kDa (Hsp83); Provisional 99.18
COG0326623 HtpG Molecular chaperone, HSP90 family [Posttransl 98.87
PRK05218613 heat shock protein 90; Provisional 98.51
PRK14083601 HSP90 family protein; Provisional 98.04
>PF00183 HSP90: Hsp90 protein; InterPro: IPR001404 Molecular chaperones, or heat shock proteins (Hsps) are ubiquitous proteins that act to maintain proper protein folding within the cell [] Back     alignment and domain information 
Probab=100.00  E-value=1.1e-62  Score=491.41  Aligned_cols=223  Identities=52%  Similarity=0.882  Sum_probs=195.7

Q ss_pred             CCCCCceEEEEECCCHHHHhcChhHHHHHhcCCEEEEeCCCchHHHHHHHhhhcCCceeeeccCCCCCCCchHHHhhhhh
Q psy15683          1 MKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGKTLVSVTKEGLELPEDEEEKKKREE   80 (304)
Q Consensus         1 Mk~~Qk~IYYi~g~s~~~~~~sP~lE~~k~kg~EVL~l~d~iDe~~i~~l~e~~g~kf~~v~~~~~~~~~~ee~k~~~~~   80 (304)
                      ||++|++|||++|+|++.+++|||+|.|++||||||||++|||+|||++|++|+|++|+||+++++++++.+++++..+.
T Consensus       283 mke~Qk~IYY~~g~s~~~~~~SP~lE~~k~kG~EVL~l~dpIDe~~i~~L~e~~gkkf~~I~ke~l~l~~~e~ek~~~e~  362 (531)
T PF00183_consen  283 MKEGQKQIYYLTGESREEAEQSPYLEAFKKKGYEVLFLTDPIDEFVIQQLEEYEGKKFQSIDKEDLDLEEDEEEKKEDEE  362 (531)
T ss_dssp             S-TT-SEEEEEESSSHHHHHTSGGGHHHHHCT--EEEE-SHHHHHHHHHHSEETTEEEEETTBSSSSSSTSHHHHHHHHH
T ss_pred             cccccccceEEecchHHHHhhccchhhHHhhCceEEEeCCchHHHHHHHHhhccccccccccccccccccchhhhhhhhh
Confidence            89999999999999999999999999999999999999999999999999999999999999999998876666666667


Q ss_pred             hHHHHHHHHHHHHhhhccccceEEEeccCCCCcEEEEecCCCchHHHHHHHHHhhccccccccccccccceeeCCCChHH
Q psy15683         81 DKVKFENLCKVMKDILDKKVEKVIVSNRLVDSPCCIVTSQYGWTANMERIMKAQALRDTSTMGYMAAKKHLEINPDHSIV  160 (304)
Q Consensus        81 ~~~~~~~L~~~~k~~L~~~v~~V~vS~rL~~sPa~iv~~e~~~s~~M~rim~~~~~~~~~~~~~~~~k~~LEINp~HplI  160 (304)
                      .++++++|++|||++||++|.+|++|.||++|||||+++++|||++|||||+||++++++...+|..++||||||+||||
T Consensus       363 ~~~~~~~L~~~~k~~L~~kV~~V~vS~RL~~sPa~lv~~e~g~s~~Merimkaqa~~~~~~~~~~~~kkiLEINp~HPLI  442 (531)
T PF00183_consen  363 LKEEFKPLTEWLKELLGDKVEKVKVSNRLVDSPAVLVSSEYGWSANMERIMKAQAMADMSMQEYMPSKKILEINPNHPLI  442 (531)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCSEEEE-SSSSSSSEEEEE-SSSB-HHHHHHHHHHHCCSTTTSSTSC--EEEEE-TTSHHH
T ss_pred             hhhHHHHHHHHHHhhhhhhhheecccccccCCcceeecccchhHHHHHHHhhhhccccccccccccccceeecCCCCHHH
Confidence            78899999999999999999999999999999999999999999999999999998766655677889999999999999


Q ss_pred             HHHHhhhhcccCcHHHHHHHHHhhhhhhhcCCCCCCChHHHHHHHHHHHHhhcCCCCCccccc
Q psy15683        161 ETLRQKADADKNDKAVKDLVNLLFETSLLSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEVAT  223 (304)
Q Consensus       161 ~~L~~~~~~~~~~~~~~~~~~~Lyd~AlL~~G~~~~d~~~f~~Ri~~lm~k~Lein~~~~~~e  223 (304)
                      ++|++++..+++++.++++|+||||+|+|++|+.++||+.|++|++++|.++|+++++.++.+
T Consensus       443 k~L~~~~~~d~~d~~~~~la~~LyD~AlL~~G~~l~dp~~F~~Ri~~lL~~~l~~~~~~~~~~  505 (531)
T PF00183_consen  443 KKLLKLVEKDEDDELAKDLAEQLYDTALLASGFELEDPAAFAKRINKLLEKSLGVDPDAEVEE  505 (531)
T ss_dssp             HHHHHHHHCCTTHHHHHHHHHHHHHHHHHHTTSS-SSHHHHHHHHHHHHHHTTC--STTTTTT
T ss_pred             HHHHhhhcccchhhHHHHHHHHHhhhhhhhcCCCcccHHHHHHHHHHHHHHhcCCCcCCcccc
Confidence            999999888888888999999999999999999999999999999999999999998865544

They assist in the folding of nascent polypeptide chains, and are also involved in the re-folding of denatured proteins following proteotoxic stress. As their name implies, the heat shock proteins were first identified as proteins that were up-regulated under conditions of elevated temperature. However, subsequent studies have shown that increased Hsp expression is induced by a variety of cellular stresses, including oxidative stress and inflammation. Five major Hsp families have been determined, and are categorized according to their molecular size (Hsp100, Hsp90, Hsp70, Hsp60, and the small Hsps). Hsps are involved in a variety of cellular processes that are ATP-dependent. These include: prevention of protein aggregation, protein degradation, protein trafficking, and maintenance of signalling proteins in a conformation that permits activation. Hsp90 chaperones are unique in their ability to regulate a specific subset of cellular signalling proteins that have been implicated in disease processes, including intracellular protein kinases, steroid hormone receptors, and growth factor receptors [].; GO: 0005524 ATP binding, 0051082 unfolded protein binding, 0006457 protein folding, 0006950 response to stress; PDB: 3K99_D 2H55_A 3RLP_A 1OSF_A 3R4M_A 1YES_A 1UY9_A 3FT8_A 2YE2_A 2QF6_A ....
>KOG0019|consensus Back     alignment and domain information
>PTZ00272 heat shock protein 83 kDa (Hsp83); Provisional Back     alignment and domain information
>KOG0020|consensus Back     alignment and domain information
>PTZ00130 heat shock protein 90; Provisional Back     alignment and domain information
>COG0326 HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK05218 heat shock protein 90; Provisional Back     alignment and domain information
>PRK14083 HSP90 family protein; Provisional Back     alignment and domain information
>KOG0019|consensus Back     alignment and domain information
>PF00183 HSP90: Hsp90 protein; InterPro: IPR001404 Molecular chaperones, or heat shock proteins (Hsps) are ubiquitous proteins that act to maintain proper protein folding within the cell [] Back     alignment and domain information
>KOG0020|consensus Back     alignment and domain information
>PTZ00130 heat shock protein 90; Provisional Back     alignment and domain information
>PTZ00272 heat shock protein 83 kDa (Hsp83); Provisional Back     alignment and domain information
>COG0326 HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK05218 heat shock protein 90; Provisional Back     alignment and domain information
>PRK14083 HSP90 family protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query304
3q6m_A448 Crystal Structure Of Human Mc-Hsp90 In C2221 Space 1e-90
3q6m_A448 Crystal Structure Of Human Mc-Hsp90 In C2221 Space 4e-13
3hjc_A444 Crystal Structure Of The Carboxy-Terminal Domain Of 8e-56
3hjc_A444 Crystal Structure Of The Carboxy-Terminal Domain Of 8e-10
2cg9_A677 Crystal Structure Of An Hsp90-Sba1 Closed Chaperone 1e-45
2cg9_A677 Crystal Structure Of An Hsp90-Sba1 Closed Chaperone 5e-09
2cge_A405 Crystal Structure Of An Hsp90-Sba1 Closed Chaperone 1e-45
2cge_A405 Crystal Structure Of An Hsp90-Sba1 Closed Chaperone 4e-09
2o1t_A450 Structure Of Middle Plus C-Terminal Domains (M+c) O 1e-43
2o1u_A666 Structure Of Full Length Grp94 With Amp-Pnp Bound L 2e-43
3pry_A268 Crystal Structure Of The Middle Domain Of Human Hsp 2e-25
2iop_A624 Crystal Structure Of Full-Length Htpg, The Escheric 1e-14
1usu_A260 The Structure Of The Complex Between Aha1 And Hsp90 2e-14
1usv_A260 The Structure Of The Complex Between Aha1 And Hsp90 2e-14
1hk7_A288 Middle Domain Of Hsp90 Length = 288 2e-14
2o1w_A506 Structure Of N-Terminal Plus Middle Domains (N+m) O 1e-13
1y4s_A559 Conformation Rearrangement Of Heat Shock Protein 90 8e-10
2gq0_A303 Crystal Structure Of The Middle Domain Of Htpg, The 4e-08
1y6z_A263 Middle Domain Of Plasmodium Falciparum Putative Hea 5e-07
>pdb|3Q6M|A Chain A, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group Length = 448 Back     alignment and structure 
Iteration: 1

 Score =  329 bits (843), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 166/250 (66%), Positives = 188/250 (75%), Gaps = 6/250 (2%)
Query: 1   MKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGKTLVS 60
           MKENQK IYYITGETKDQVANS+FVER++K G EVIYM EPIDEY VQQLK+++GKTLVS
Sbjct: 194 MKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVS 253
Query: 61  VTXXXXXXXXXXXXXXXXXXXXXXXXNLCKVMKDILDKKVEKVIVSNRLVDSPCCIVTSQ 120
           VT                        NLCK+MKDIL+KKVEKV+VSNRLV SPCCIVTS 
Sbjct: 254 VTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTST 313
Query: 121 YGWTANMERIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQXXXXXXXXXXXXXLV 180
           YGWTANMERIMKAQALRD STMGYMAAKKHLEINPDHSI+ETLRQ             LV
Sbjct: 314 YGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLV 373
Query: 181 NLLFETSLLSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEVATGDDVKAG---DIPVAEG 237
            LL+ET+LLSSGF+LE+PQ HA RI+RMIKLGLGI+++D   T DD  A    ++P  EG
Sbjct: 374 ILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDD--PTADDTSAAVTEEMPPLEG 431
Query: 238 EAEDASRMEE 247
           + +D SRMEE
Sbjct: 432 D-DDTSRMEE 440
>pdb|3Q6M|A Chain A, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group Length = 448 Back     alignment and structure
>pdb|3HJC|A Chain A, Crystal Structure Of The Carboxy-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312 Length = 444 Back     alignment and structure
>pdb|3HJC|A Chain A, Crystal Structure Of The Carboxy-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312 Length = 444 Back     alignment and structure
>pdb|2CG9|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 677 Back     alignment and structure
>pdb|2CG9|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 677 Back     alignment and structure
>pdb|2CGE|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 405 Back     alignment and structure
>pdb|2CGE|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 405 Back     alignment and structure
>pdb|2O1T|A Chain A, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94 Length = 450 Back     alignment and structure
>pdb|2O1U|A Chain A, Structure Of Full Length Grp94 With Amp-Pnp Bound Length = 666 Back     alignment and structure
>pdb|3PRY|A Chain A, Crystal Structure Of The Middle Domain Of Human Hsp90-Beta Refined At 2.3 A Resolution Length = 268 Back     alignment and structure
>pdb|2IOP|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 624 Back     alignment and structure
>pdb|1USU|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 Back     alignment and structure
>pdb|1USV|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 Back     alignment and structure
>pdb|1HK7|A Chain A, Middle Domain Of Hsp90 Length = 288 Back     alignment and structure
>pdb|2O1W|A Chain A, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94 Length = 506 Back     alignment and structure
>pdb|1Y4S|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon Adp Binding Length = 559 Back     alignment and structure
>pdb|2GQ0|A Chain A, Crystal Structure Of The Middle Domain Of Htpg, The E. Coli Hsp90 Length = 303 Back     alignment and structure
>pdb|1Y6Z|A Chain A, Middle Domain Of Plasmodium Falciparum Putative Heat Shock Protein Pf14_0417 Length = 263 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query304
3q6m_A448 Heat shock protein HSP 90-alpha; three domains, tr 1e-126
3q6m_A448 Heat shock protein HSP 90-alpha; three domains, tr 5e-11
3hjc_A444 Heat shock protein 83-1; sleeping sickness, struct 1e-123
3hjc_A444 Heat shock protein 83-1; sleeping sickness, struct 2e-12
2cge_A405 ATP-dependent molecular chaperone HSP82; chaperone 1e-114
2cge_A405 ATP-dependent molecular chaperone HSP82; chaperone 4e-10
2o1u_A666 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 1e-105
2o1u_A666 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 7e-11
2cg9_A677 ATP-dependent molecular chaperone HSP82; chaperone 1e-101
2cg9_A677 ATP-dependent molecular chaperone HSP82; chaperone 9e-09
2ioq_A624 Chaperone protein HTPG; heat shock protein, HSP90; 4e-82
2ioq_A624 Chaperone protein HTPG; heat shock protein, HSP90; 7e-05
1y4s_A559 Chaperone protein HTPG; HSP90, molecular chaperone 3e-57
1sf8_A126 Chaperone protein HTPG; four helix bundle dimeriza 3e-53
1sf8_A126 Chaperone protein HTPG; four helix bundle dimeriza 6e-08
1hk7_A288 Heat shock protein HSP82; ATPase, chaperone; 2.5A 2e-47
2gq0_A303 Chaperone protein HTPG; molecular chaperone, HSP90 7e-45
3pry_A268 Heat shock protein HSP 90-beta; structural genomic 5e-38
1usu_A260 Heat shock protein HSP82; chaperone/complex, chape 8e-34
1y6z_A263 Heat shock protein, putative; chaperone, structura 2e-31
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Length = 448 Back     alignment and structure
 Score =  365 bits (939), Expect = e-126
 Identities = 192/247 (77%), Positives = 215/247 (87%)

Query: 1   MKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGKTLVS 60
           MKENQK IYYITGETKDQVANS+FVER++K G EVIYM EPIDEY VQQLK+++GKTLVS
Sbjct: 194 MKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVS 253

Query: 61  VTKEGLELPEDEEEKKKREEDKVKFENLCKVMKDILDKKVEKVIVSNRLVDSPCCIVTSQ 120
           VTKEGLELPEDEEEKKK+EE K KFENLCK+MKDIL+KKVEKV+VSNRLV SPCCIVTS 
Sbjct: 254 VTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTST 313

Query: 121 YGWTANMERIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQKADADKNDKAVKDLV 180
           YGWTANMERIMKAQALRD STMGYMAAKKHLEINPDHSI+ETLRQKA+ADKNDK+VKDLV
Sbjct: 314 YGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLV 373

Query: 181 NLLFETSLLSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEVATGDDVKAGDIPVAEGEAE 240
            LL+ET+LLSSGF+LE+PQ HA RI+RMIKLGLGI+++D  A        +        +
Sbjct: 374 ILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDTSAAVTEEMPPLEGDD 433

Query: 241 DASRMEE 247
           D SRMEE
Sbjct: 434 DTSRMEE 440
>3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Length = 448 Back     alignment and structure
>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Length = 444 Back     alignment and structure
>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Length = 444 Back     alignment and structure
>2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Length = 405 Back     alignment and structure
>2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Length = 405 Back     alignment and structure
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Length = 666 Back     alignment and structure
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Length = 666 Back     alignment and structure
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Length = 677 Back     alignment and structure
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Length = 677 Back     alignment and structure
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Length = 624 Back     alignment and structure
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Length = 624 Back     alignment and structure
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Length = 559 Back     alignment and structure
>1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 Length = 126 Back     alignment and structure
>1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 Length = 126 Back     alignment and structure
>1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 Length = 288 Back     alignment and structure
>2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} Length = 303 Back     alignment and structure
>3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} Length = 268 Back     alignment and structure
>1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A Length = 260 Back     alignment and structure
>1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} Length = 263 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query304
3q6m_A448 Heat shock protein HSP 90-alpha; three domains, tr 100.0
3hjc_A444 Heat shock protein 83-1; sleeping sickness, struct 100.0
2cge_A405 ATP-dependent molecular chaperone HSP82; chaperone 100.0
2o1u_A666 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 100.0
2cg9_A677 ATP-dependent molecular chaperone HSP82; chaperone 100.0
2ioq_A624 Chaperone protein HTPG; heat shock protein, HSP90; 100.0
1sf8_A126 Chaperone protein HTPG; four helix bundle dimeriza 100.0
1y4s_A559 Chaperone protein HTPG; HSP90, molecular chaperone 100.0
1hk7_A288 Heat shock protein HSP82; ATPase, chaperone; 2.5A 99.94
2gq0_A303 Chaperone protein HTPG; molecular chaperone, HSP90 99.94
3pry_A268 Heat shock protein HSP 90-beta; structural genomic 99.88
1usu_A260 Heat shock protein HSP82; chaperone/complex, chape 99.86
1y6z_A263 Heat shock protein, putative; chaperone, structura 99.81
1sf8_A126 Chaperone protein HTPG; four helix bundle dimeriza 99.51
3q6m_A448 Heat shock protein HSP 90-alpha; three domains, tr 99.46
3hjc_A444 Heat shock protein 83-1; sleeping sickness, struct 99.35
2o1u_A666 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 99.3
2cge_A405 ATP-dependent molecular chaperone HSP82; chaperone 99.24
2cg9_A677 ATP-dependent molecular chaperone HSP82; chaperone 99.0
2ioq_A624 Chaperone protein HTPG; heat shock protein, HSP90; 98.96
>3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Back     alignment and structure
Probab=100.00  E-value=1.2e-66  Score=504.93  Aligned_cols=238  Identities=79%  Similarity=1.187  Sum_probs=191.5

Q ss_pred             CCCCCceEEEEECCCHHHHhcChhHHHHHhcCCEEEEeCCCchHHHHHHHhhhcCCceeeeccCCCCCCCchHHHhhhhh
Q psy15683          1 MKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGKTLVSVTKEGLELPEDEEEKKKREE   80 (304)
Q Consensus         1 Mk~~Qk~IYYi~g~s~~~~~~sP~lE~~k~kg~EVL~l~d~iDe~~i~~l~e~~g~kf~~v~~~~~~~~~~ee~k~~~~~   80 (304)
                      ||++|+.|||++|+|++++++|||+|.|++||||||||++||||||+++|.+|+||+|+||++++++++++++++++.++
T Consensus       194 mke~Qk~IYYitg~s~~~~~~sp~lE~~k~kG~EVL~l~d~iDe~~i~~L~ef~gk~~~sV~k~~l~l~~~eeek~~~ee  273 (448)
T 3q6m_A          194 MKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEE  273 (448)
T ss_dssp             CCSSCCEEEEEECSCHHHHHTSGGGHHHHHHTCCEEEECSTHHHHHTTTCCEETTEEEEETTBSCCCCCCCHHHHHHHHH
T ss_pred             ccccCceEEEEecCCHHHHHhChHHHHHHHCCCEEEEecCchHHHHHHHHHhhCCceEEEecccccCcccchhhhhhHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999776666555566


Q ss_pred             hHHHHHHHHHHHHhhhccccceEEEeccCCCCcEEEEecCCCchHHHHHHHHHhhccccccccccccccceeeCCCChHH
Q psy15683         81 DKVKFENLCKVMKDILDKKVEKVIVSNRLVDSPCCIVTSQYGWTANMERIMKAQALRDTSTMGYMAAKKHLEINPDHSIV  160 (304)
Q Consensus        81 ~~~~~~~L~~~~k~~L~~~v~~V~vS~rL~~sPa~iv~~e~~~s~~M~rim~~~~~~~~~~~~~~~~k~~LEINp~HplI  160 (304)
                      .++++++||+|||++||++|++|++|+||++||||||++++|||++|||||++|+++++++++++..+|||||||+||||
T Consensus       274 ~~~~~~~L~~~~K~~L~~kV~~V~vS~RL~~sP~~lv~~e~g~s~~Merimkaq~~~d~~~~~~~~~kk~LEINp~Hpli  353 (448)
T 3q6m_A          274 KKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSII  353 (448)
T ss_dssp             HHHHSHHHHHHHHHHTGGGCSEEEECSSCSSSSEEEEECSSSCCHHHHHHCCC--------------CEEEEECTTCHHH
T ss_pred             HHHHHHHHHHHHHHHhcCcceEEEecCCCCCCCeEEEeCCcchhHHHHHHHHHhhccccccccccccCceeEECCCCHHH
Confidence            67889999999999999999999999999999999999999999999999999998776666778899999999999999


Q ss_pred             HHHHhhhhcccCcHHHHHHHHHhhhhhhhcCCCCCCChHHHHHHHHHHHHhhcCCCCCcccccCC-CccCCCCCCcccc
Q psy15683        161 ETLRQKADADKNDKAVKDLVNLLFETSLLSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEVATGD-DVKAGDIPVAEGE  238 (304)
Q Consensus       161 ~~L~~~~~~~~~~~~~~~~~~~Lyd~AlL~~G~~~~d~~~f~~Ri~~lm~k~Lein~~~~~~e~~-~~~~~~~~~~e~~  238 (304)
                      ++|.++..++++++.++++|++|||+|+|++|+.++||+.|++||+++|+++|+++++.+..++. ++++++.|+.+.+
T Consensus       354 ~~L~~~~~~d~~~~~~~~~~~lLyd~AlL~~G~~l~DP~~f~~ri~~ll~~~L~id~~~~~~~~~~~~~~~~~~~~~~~  432 (448)
T 3q6m_A          354 ETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDTSAAVTEEMPPLEGD  432 (448)
T ss_dssp             HHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHTTC-------------------------
T ss_pred             HHHHHHhhcccchhHHHHHHHHHHHhHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCccccccccccccccCCCCCCCCC
Confidence            99999887777778899999999999999999999999999999999999999999877655332 2223344554443
>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Back     alignment and structure
>2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Back     alignment and structure
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Back     alignment and structure
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Back     alignment and structure
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Back     alignment and structure
>1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 Back     alignment and structure
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Back     alignment and structure
>1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 Back     alignment and structure
>2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} Back     alignment and structure
>3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} SCOP: d.14.1.8 Back     alignment and structure
>1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A Back     alignment and structure
>1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} Back     alignment and structure
>1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 Back     alignment and structure
>3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Back     alignment and structure
>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Back     alignment and structure
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Back     alignment and structure
>2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Back     alignment and structure
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Back     alignment and structure
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 304
d1sf8a_115 d.271.1.1 (A:) Chaperone protein HtpG {Escherichia 4e-33
d1sf8a_115 d.271.1.1 (A:) Chaperone protein HtpG {Escherichia 1e-06
d1usua_256 d.14.1.8 (A:) Heat shock protein hsp82 {Baker's ye 2e-23
>d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} Length = 115 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: HSP90 C-terminal domain
superfamily: HSP90 C-terminal domain
family: HSP90 C-terminal domain
domain: Chaperone protein HtpG
species: Escherichia coli [TaxId: 562]

 Score =  115 bits (290), Expect = 4e-33
 Identities = 29/123 (23%), Positives = 61/123 (49%), Gaps = 10/123 (8%)

Query: 87  NLCKVMKDILDKKVEKVIVSNRLVDSPCCIVTSQYGWTANMERIMKAQALRDTSTMGYMA 146
           +    +K +L ++V+ V +++RL D+P  + T     +  M ++  A             
Sbjct: 1   SFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAG------QKVPE 54

Query: 147 AKKHLEINPDHSIVETLRQKADADKNDKAVKDLVNLLFETSLLSSGFTLEEPQVHAARIH 206
            K   E+NPDH +V    ++A   +++    + V LL + +LL+   TLE+P +   R++
Sbjct: 55  VKYIFELNPDHVLV----KRAADTEDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRMN 110

Query: 207 RMI 209
           +++
Sbjct: 111 QLL 113
>d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} Length = 115 Back     information, alignment and structure
>d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 256 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query304
d1sf8a_115 Chaperone protein HtpG {Escherichia coli [TaxId: 5 100.0
d1usua_256 Heat shock protein hsp82 {Baker's yeast (Saccharom 99.83
d1sf8a_115 Chaperone protein HtpG {Escherichia coli [TaxId: 5 99.41
>d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: HSP90 C-terminal domain
superfamily: HSP90 C-terminal domain
family: HSP90 C-terminal domain
domain: Chaperone protein HtpG
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.2e-37  Score=249.07  Aligned_cols=113  Identities=25%  Similarity=0.463  Sum_probs=103.9

Q ss_pred             HHHHHHhhhccccceEEEeccCCCCcEEEEecCCCchHHHHHHHHHhhccccccccccccccceeeCCCChHHHHHHhhh
Q psy15683         88 LCKVMKDILDKKVEKVIVSNRLVDSPCCIVTSQYGWTANMERIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQKA  167 (304)
Q Consensus        88 L~~~~k~~L~~~v~~V~vS~rL~~sPa~iv~~e~~~s~~M~rim~~~~~~~~~~~~~~~~k~~LEINp~HplI~~L~~~~  167 (304)
                      |++|+|++||++|++|++|+||++||||||++++|||++|||||++|++      .++..+|+|||||+||||++|.+. 
T Consensus         2 l~~~~K~~L~d~V~~V~~S~RL~~sP~~lv~~~~~~s~~M~kimk~~~~------~~~~~k~iLEiNp~H~lIk~l~~~-   74 (115)
T d1sf8a_           2 FIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQ------KVPEVKYIFELNPDHVLVKRAADT-   74 (115)
T ss_dssp             HHHHHHHHHGGGSSEEEECCCCSSCCEEEECCTTSCCHHHHHHHHTTTS------CCCCCCCEEEECTTSHHHHHHHHC-
T ss_pred             HHHHHHHHhcCcccEEeeccccccCceeeecCCcchHHHHHHHHHHhcc------ccccccceeeeCCCCHHHHHHHhc-
Confidence            8999999999999999999999999999999999999999999999872      245579999999999999999763 


Q ss_pred             hcccCcHHHHHHHHHhhhhhhhcCCCCCCChHHHHHHHHHHHH
Q psy15683        168 DADKNDKAVKDLVNLLFETSLLSSGFTLEEPQVHAARIHRMIK  210 (304)
Q Consensus       168 ~~~~~~~~~~~~~~~Lyd~AlL~~G~~~~d~~~f~~Ri~~lm~  210 (304)
                         .+++.++++++||||+|+|.+|+.++||+.|++|++++|.
T Consensus        75 ---~~~~~~~~~~~~L~d~A~l~~G~~l~Dp~~f~~ri~~ll~  114 (115)
T d1sf8a_          75 ---EDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRMNQLLV  114 (115)
T ss_dssp             ---CSHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHH
T ss_pred             ---cchHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHh
Confidence               4566799999999999999999999999999999999984
>d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure