Psyllid ID: psy157


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------
MVDYSKWKDIEISDDEDETHPNIDTPSLFRWRHQARVERMEEQRLENEKFQQEKEKTLKTLEETKKKLVESEQAGANNLDELKKALAELEKEAANIRKKEEDLKKKEKITPWNVDTISKPGFTKTVVNKKPPLQQGEKSDEEKEQEMKAFVKENEKLIKQYANYLVIWCINLAMDEKFDLMDHVAHQCICMQYLLELSKSLNIDPRACIGSFFSKIQIAEPDYKASFDDELKSFKERIRNRAKEKLDEALKEVEEEERQKRLGPGGLDPVEVFESLPDVLKKCFELQDTAMLQEAIASLSPEEATYHMKRCVDSGLWVPDAKKAAGESEDPQENTPDAEDPTYSAVD
cccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHccHHHHHHHHHcccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccc
cccccccccEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHccHHHHHHHHHccHHHHHHHHHcccHHHHHHHHHHHHHcccEccccccccccccccccccccccccccHccc
mvdyskwkdieisddedethpnidtpslfRWRHQARVERMEEQRLENEKFQQEKEKTLKTLEETKKKLVESEQAGANNLDELKKALAELEKEAANIRKKEEDlkkkekitpwnvdtiskpgftktvvnkkpplqqgeksdEEKEQEMKAFVKENEKLIKQYANYLVIWCINLAMDEKFDLMDHVAHQCICMQYLLELSkslnidpracigsffskiqiaepdykasFDDELKSFKERIRNRAKEKLDEALKEVEEEERqkrlgpggldpvevfESLPDVLKKCFELQDTAMLQEAIASLSPEEATYHMKrcvdsglwvpdakkaagesedpqentpdaedptysavd
MVDYSKWKDieisddedethpnidtpslfrWRHQARVERMEeqrlenekfqqekEKTLKTLEETKKKlveseqagannlDELKKALAELEKEAAnirkkeedlkkkekitpwnvdtiskpgftktvvnkkpplqqgeksdeeKEQEMKAFVKENEKLIKQYANYLVIWCINLAMDEKFDLMDHVAHQCICMQYLLELSKSLNIDPRACIGSFFSKIQIAEPDYKASFDDELKSFKERIRNRAKEKldealkeveeeerqkrlgpggldpvEVFESLPDVLKKCFELQDTAMLQEAIASLSPEEATYHMKRCVDSGLWVPDAKKaagesedpqentpdaedptysavd
MVDYSKWKDIEISDDEDETHPNIDTPSLFRWRHQARVERMEEQRLENEKFQQekektlktleetkkklVESEQAGANNLDelkkalaelekeaaNIRkkeedlkkkekITPWNVDTISKPGFTKTVVNKKPPLQQGEKSDEEKEQEMKAFVKENEKLIKQYANYLVIWCINLAMDEKFDLMDHVAHQCICMQYLLELSKSLNIDPRACIGSFFSKIQIAEPDYKASFDDELKSFKERIRNrakekldealkeveeeerqkrlGPGGLDPVEVFESLPDVLKKCFELQDTAMLQEAIASLSPEEATYHMKRCVDSGLWVPDAKKAAGESEDPQENTPDAEDPTYSAVD
***************************************************************************************************************WNV**************************************ENEKLIKQYANYLVIWCINLAMDEKFDLMDHVAHQCICMQYLLELSKSLNIDPRACIGSFFSKIQIAEPDYK*********************************************VEVFESLPDVLKKCFELQDTAMLQEAIASLSPEEATYHMKRCVDSGLWV*****************************
*VDYSKWKDIEISDDEDETHPNIDTPSLFRW************************KTLKT****************************************************************************************AFVKENEKLIKQYANYLVIWCINLAMDEKFDLMDHVAHQCICMQYLLELSKSLNIDPRACIGSFFSKIQIAEPDYKASFDDELKSFKERIRN*******************************VFESLPDVLKKCFELQDTAMLQEAIASLSPEEATYHMKRCVDSGLWV*****************************
MVDYSKWKDIEISDDEDETHPNIDTPSLFRWRHQARVERMEEQRLENEKFQQEKEKTLKTLEETKKKLVESEQAGANNLDELKKALAELEKEAANIRKKEEDLKKKEKITPWNVDTISKPGFTKTVVNKKP***************MKAFVKENEKLIKQYANYLVIWCINLAMDEKFDLMDHVAHQCICMQYLLELSKSLNIDPRACIGSFFSKIQIAEPDYKASFDDELKSFKERIRNRAKEKLDEAL***********LGPGGLDPVEVFESLPDVLKKCFELQDTAMLQEAIASLSPEEATYHMKRCVDSGLWVPDA**************************
*VDYSKWKDIEISDDEDETHPNIDTPSLFRWRHQARVERMEEQRLENEKFQQEKEKTLKTLEETKKKLVESEQAGANNLDELKKALAELEKEAANIRKKEEDLKKKEKITPWNVDTISKPGFTKTVVNKKP*******SDEEKEQEMKAFVKENEKLIKQYANYLVIWCINLAMDEKFDLMDHVAHQCICMQYLLELSKSLNIDPRACIGSFFSKIQIAEPDYKASFDDELKSFKERIRNRAKEKLDEALKEVEEEERQKRLGPGGLDPVEVFESLPDVLKKCFELQDTAMLQEAIASLSPEEATYHMKRCVDSGLWVPD***************************
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MVDYSKWKDIEISDDEDETHPNIDTPSLFRWRHQARVERxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTPWNVDTISKPGFTKTVVNKKPPLQQGEKSxxxxxxxxxxxxxxxxxxxxxYANYLVIWCINLAMDEKFDLMDHVAHQCICMQYLLELSKSLNIDPRACIGSFFSKIQIAEPDYKASFDDELxxxxxxxxxxxxxxxxxxxxxxxxxxxxKRLGPGGLDPVEVFESLPDVLKKCFELQDTAMLQEAIASLSPEEATYHMKRCVDSGLWVPDAKKAAGESEDPQENTPDAEDPTYSAVD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query347 2.2.26 [Sep-21-2011]
Q24740399 Hsp90 co-chaperone Cdc37 N/A N/A 0.913 0.794 0.578 1e-108
Q24276389 Hsp90 co-chaperone Cdc37 yes N/A 0.985 0.879 0.524 1e-103
Q16543378 Hsp90 co-chaperone Cdc37 yes N/A 0.962 0.883 0.506 2e-94
Q63692379 Hsp90 co-chaperone Cdc37 yes N/A 0.962 0.881 0.505 4e-94
Q61081379 Hsp90 co-chaperone Cdc37 yes N/A 0.962 0.881 0.505 1e-93
O57476393 Hsp90 co-chaperone Cdc37 yes N/A 0.884 0.781 0.498 2e-90
Q5EAC6380 Hsp90 co-chaperone Cdc37 yes N/A 0.962 0.878 0.496 3e-90
Q9DGQ7377 Hsp90 co-chaperone Cdc37 N/A N/A 0.919 0.846 0.501 5e-86
O02108370 Probable Hsp90 co-chapero yes N/A 0.902 0.845 0.437 2e-64
A7YY97313 Hsp90 co-chaperone Cdc37- no N/A 0.521 0.578 0.378 2e-32
>sp|Q24740|CDC37_DROVI Hsp90 co-chaperone Cdc37 OS=Drosophila virilis GN=Cdc37 PE=3 SV=1 Back     alignment and function desciption
 Score =  392 bits (1007), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 200/346 (57%), Positives = 252/346 (72%), Gaps = 29/346 (8%)

Query: 1   MVDYSKWKDIEISDDEDETHPNIDTPSLFRWRHQARVERMEEQRLENEKFQQEKEKTLKT 60
           MVDYSKWK+IEISDDEDETHPNIDTPSLFRWRHQARVERM E   E E+ +++++     
Sbjct: 1   MVDYSKWKNIEISDDEDETHPNIDTPSLFRWRHQARVERMAESEKEKEELKKKRQSYQAR 60

Query: 61  LEETKKKLVESEQAGANNLDELKKALAELEKEAANIRKKEEDLKKKEKITPWNVDTISKP 120
           L   K+ + + E     +   LKK L ++E E   + ++E +L K+EK TPWNVDTISKP
Sbjct: 61  LINVKELISKKE----GDEVALKKELEKIENEGKELDRQENELLKREKKTPWNVDTISKP 116

Query: 121 GFTKTVVNKKPPLQQGEK-SDEEKEQEMKAFVKENEKLIKQY------------------ 161
           GF KTV+NKKPP +  E  ++EE+EQ MK FVKENEKL KQY                  
Sbjct: 117 GFEKTVINKKPPRKAAEDLTEEEREQRMKQFVKENEKLCKQYGMLRKYDDSKRFLQEHLD 176

Query: 162 ------ANYLVIWCINLAMDEKFDLMDHVAHQCICMQYLLELSKSLNIDPRACIGSFFSK 215
                 ANYLVIW INL M+EK DLM HVAHQCICMQY+LEL+K L++DPRAC+ SFFSK
Sbjct: 177 LVCEETANYLVIWSINLEMEEKHDLMAHVAHQCICMQYILELAKQLDVDPRACVSSFFSK 236

Query: 216 IQIAEPDYKASFDDELKSFKERIRNRAKEKLDEALKEVEEEERQKRLGPGGLDPVEVFES 275
           IQ   P+Y+  F+ E++ FKERI+ RA+EKL EA+ ++EEEE+Q+R+GPGGLDP +VFES
Sbjct: 237 IQQCVPEYRQQFESEIEGFKERIQKRAQEKLQEAMAQLEEEEKQERMGPGGLDPADVFES 296

Query: 276 LPDVLKKCFELQDTAMLQEAIASLSPEEATYHMKRCVDSGLWVPDA 321
           LP+ LK CFE +D  +LQ+ IA++  ++A YHMKRCVDSGLWVP+A
Sbjct: 297 LPEELKACFESRDIELLQKTIATMPVDQAKYHMKRCVDSGLWVPNA 342




Co-chaperone that binds to numerous kinases and promotes their interaction with the Hsp90 complex, resulting in stabilization and promotion of their activity.
Drosophila virilis (taxid: 7244)
>sp|Q24276|CDC37_DROME Hsp90 co-chaperone Cdc37 OS=Drosophila melanogaster GN=Cdc37 PE=1 SV=1 Back     alignment and function description
>sp|Q16543|CDC37_HUMAN Hsp90 co-chaperone Cdc37 OS=Homo sapiens GN=CDC37 PE=1 SV=1 Back     alignment and function description
>sp|Q63692|CDC37_RAT Hsp90 co-chaperone Cdc37 OS=Rattus norvegicus GN=Cdc37 PE=1 SV=2 Back     alignment and function description
>sp|Q61081|CDC37_MOUSE Hsp90 co-chaperone Cdc37 OS=Mus musculus GN=Cdc37 PE=2 SV=1 Back     alignment and function description
>sp|O57476|CDC37_CHICK Hsp90 co-chaperone Cdc37 OS=Gallus gallus GN=CDC37 PE=2 SV=1 Back     alignment and function description
>sp|Q5EAC6|CDC37_BOVIN Hsp90 co-chaperone Cdc37 OS=Bos taurus GN=CDC37 PE=2 SV=1 Back     alignment and function description
>sp|Q9DGQ7|CDC37_TETFL Hsp90 co-chaperone Cdc37 OS=Tetraodon fluviatilis GN=cdc37 PE=3 SV=1 Back     alignment and function description
>sp|O02108|CDC37_CAEEL Probable Hsp90 co-chaperone cdc37 OS=Caenorhabditis elegans GN=cdc-37 PE=2 SV=1 Back     alignment and function description
>sp|A7YY97|CD37L_DANRE Hsp90 co-chaperone Cdc37-like 1 OS=Danio rerio GN=cdc37l1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query347
307182227368 Hsp90 co-chaperone Cdc37 [Camponotus flo 0.976 0.921 0.626 1e-114
357629461371 HSP90 cochaperone CDC37-like proteinue [ 0.965 0.902 0.612 1e-113
346471981359 hypothetical protein [Amblyomma maculatu 0.913 0.883 0.587 1e-112
307210255366 Hsp90 co-chaperone Cdc37 [Harpegnathos s 0.974 0.923 0.615 1e-109
241747021363 cell division cycle regulator protein, p 0.965 0.922 0.580 1e-108
193624654370 PREDICTED: hsp90 co-chaperone Cdc37-like 0.945 0.886 0.575 1e-107
442758215363 Putative cell division cycle 37 protein 0.965 0.922 0.571 1e-107
195375535399 Cdc37 [Drosophila virilis] gi|21542002|s 0.913 0.794 0.578 1e-106
242011391 607 paramyosin, putative [Pediculus humanus 0.927 0.530 0.571 1e-106
157125064375 hypothetical protein AaeL_AAEL010057 [Ae 0.925 0.856 0.593 1e-106
>gi|307182227|gb|EFN69558.1| Hsp90 co-chaperone Cdc37 [Camponotus floridanus] Back     alignment and taxonomy information
 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 231/369 (62%), Positives = 287/369 (77%), Gaps = 30/369 (8%)

Query: 1   MVDYSKWKDIEISDDEDETHPNIDTPSLFRWRHQARVERMEEQRLENEKFQQEKEKTLKT 60
           MVDYSKWK+IEISDDED+THPNIDTPSLFRWRHQAR+ERMEE++ E E+  ++K +TL+ 
Sbjct: 1   MVDYSKWKNIEISDDEDDTHPNIDTPSLFRWRHQARLERMEERKKEQEEHNRKKAETLQK 60

Query: 61  LEETKKKL--VESEQAGANNLDELKKALAELEKEAANIRKKEEDLKKKEKITPWNVDTIS 118
           L++ K+KL  +ESEQ  + +L  LKK L +LE+E   I++KEE++KKKE++TPWNVDTI 
Sbjct: 61  LKDAKEKLAKLESEQKDSADLTTLKKVLHDLEEEEKKIKQKEEEMKKKERLTPWNVDTIG 120

Query: 119 KPGFTKTVVNKKPPLQQGEK--SDEEKEQEMKAFVKENEKLIKQY--------------- 161
           + GFTKTV+N KPP +  +   SDEEKE+ MK FVKENEK +K++               
Sbjct: 121 QDGFTKTVINTKPPRKDADAGLSDEEKEKRMKQFVKENEKKLKEFGMLRKYDDSKKFLQE 180

Query: 162 ---------ANYLVIWCINLAMDEKFDLMDHVAHQCICMQYLLELSKSLNIDPRACIGSF 212
                    ANYLV+WCINL M+EK DLM+HVAHQCICMQY+LELSK L +DPRAC+GSF
Sbjct: 181 HPYLVCENTANYLVVWCINLEMEEKHDLMEHVAHQCICMQYILELSKQLEVDPRACVGSF 240

Query: 213 FSKIQIAEPDYKASFDDELKSFKERIRNRAKEKLDEALKEVEEEERQKRLGPGGLDPVEV 272
           FS+IQIAE +YK SFDDEL++FK+RIR RA E + +A++E EEEER+ RLGPGGLDPVEV
Sbjct: 241 FSRIQIAEVEYKNSFDDELRAFKDRIRKRAAENVTDAVREAEEEERKARLGPGGLDPVEV 300

Query: 273 FESLPDVLKKCFELQDTAMLQEAIASLSPEEATYHMKRCVDSGLWVPDAKKAAGESEDPQ 332
           FESLP+ L+KCFE QD  +LQ+ IAS+S EEATYHMKRCVDSGLWVPDAK  A E E+ Q
Sbjct: 301 FESLPESLQKCFEAQDIPLLQQTIASMSEEEATYHMKRCVDSGLWVPDAK--AKEKEEQQ 358

Query: 333 ENTPDAEDP 341
           + T +  DP
Sbjct: 359 KATKETPDP 367




Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357629461|gb|EHJ78215.1| HSP90 cochaperone CDC37-like proteinue [Danaus plexippus] Back     alignment and taxonomy information
>gi|346471981|gb|AEO35835.1| hypothetical protein [Amblyomma maculatum] Back     alignment and taxonomy information
>gi|307210255|gb|EFN86905.1| Hsp90 co-chaperone Cdc37 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|241747021|ref|XP_002414301.1| cell division cycle regulator protein, putative [Ixodes scapularis] gi|215508155|gb|EEC17609.1| cell division cycle regulator protein, putative [Ixodes scapularis] Back     alignment and taxonomy information
>gi|193624654|ref|XP_001952408.1| PREDICTED: hsp90 co-chaperone Cdc37-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|442758215|gb|JAA71266.1| Putative cell division cycle 37 protein cdc37 [Ixodes ricinus] Back     alignment and taxonomy information
>gi|195375535|ref|XP_002046556.1| Cdc37 [Drosophila virilis] gi|21542002|sp|Q24740.1|CDC37_DROVI RecName: Full=Hsp90 co-chaperone Cdc37; AltName: Full=Hsp90 chaperone protein kinase-targeting subunit gi|559022|gb|AAA50964.1| cell division cycle protein [Drosophila virilis] gi|194153714|gb|EDW68898.1| Cdc37 [Drosophila virilis] Back     alignment and taxonomy information
>gi|242011391|ref|XP_002426434.1| paramyosin, putative [Pediculus humanus corporis] gi|212510539|gb|EEB13696.1| paramyosin, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|157125064|ref|XP_001660603.1| hypothetical protein AaeL_AAEL010057 [Aedes aegypti] gi|108873786|gb|EAT38011.1| AAEL010057-PA [Aedes aegypti] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query347
FB|FBgn0011573389 Cdc37 "Cdc37" [Drosophila mela 0.585 0.521 0.5 5.4e-91
UNIPROTKB|E2RCN3380 CDC37 "Uncharacterized protein 0.564 0.515 0.472 1.9e-81
UNIPROTKB|Q16543378 CDC37 "Hsp90 co-chaperone Cdc3 0.567 0.521 0.475 3.1e-81
UNIPROTKB|Q684M6380 CDC37 "Uncharacterized protein 0.564 0.515 0.462 1.7e-80
RGD|71006379 Cdc37 "cell division cycle 37" 0.567 0.519 0.465 2.8e-80
UNIPROTKB|Q5EAC6380 CDC37 "Hsp90 co-chaperone Cdc3 0.536 0.489 0.476 2.8e-80
MGI|MGI:109531379 Cdc37 "cell division cycle 37" 0.567 0.519 0.465 3.5e-80
UNIPROTKB|O57476393 CDC37 "Hsp90 co-chaperone Cdc3 0.561 0.496 0.472 3.9e-79
ZFIN|ZDB-GENE-040426-940367 cdc37 "cell division cycle 37 0.536 0.506 0.465 1.8e-74
UNIPROTKB|Q24740399 Cdc37 "Hsp90 co-chaperone Cdc3 0.576 0.501 0.504 1.6e-73
FB|FBgn0011573 Cdc37 "Cdc37" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 530 (191.6 bits), Expect = 5.4e-91, Sum P(3) = 5.4e-91
 Identities = 103/206 (50%), Positives = 134/206 (65%)

Query:   143 KEQEMKAFVKENEKLI-KQYANYLVIWCINLAMDEKFDLMDHVAHQCICMQYLLELSKSL 201
             K  + K F++E+  L+ ++ ANYLVIW INL M+EK +LM HVAHQCICMQY+LEL+K L
Sbjct:   163 KYDDSKRFLQEHLHLVGEETANYLVIWSINLEMEEKHELMAHVAHQCICMQYILELAKQL 222

Query:   202 NIDPRACIGSFFSKIQIAEPDYKASFDDELKSFKERIRNXXXXXXXXXXXXXXXXXXXXX 261
             ++DPRAC+ SFFSKIQ   P+Y+A FD E++ FK RI+                      
Sbjct:   223 DVDPRACVSSFFSKIQHCHPEYRAQFDSEIEGFKGRIQKRAQEKIQEAIAQAEEEERKER 282

Query:   262 XGPGGLDPVEVFESLPDVLKKCFELQDTAMLQEAIASLSPEEATYHMKRCVDSGLWVPDA 321
              GPGGLDP +VFESLPD LK CFE +D  +LQ+ IA++  + A  HMKRCVDSGLWVP+A
Sbjct:   283 LGPGGLDPADVFESLPDELKACFESRDVELLQKTIAAMPVDVAKLHMKRCVDSGLWVPNA 342

Query:   322 KKAAGES--EDPQENTPDAEDPTYSA 345
                 G+   ED  ++    E+ T  A
Sbjct:   343 ADLEGDKKEEDDSDDVAGGEEKTDDA 368


GO:0005737 "cytoplasm" evidence=IDA
GO:0030296 "protein tyrosine kinase activator activity" evidence=NAS
GO:0007243 "intracellular protein kinase cascade" evidence=NAS
GO:0051087 "chaperone binding" evidence=NAS
GO:0051082 "unfolded protein binding" evidence=ISS
GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=NAS
GO:0019901 "protein kinase binding" evidence=IEA
GO:0022008 "neurogenesis" evidence=IMP
UNIPROTKB|E2RCN3 CDC37 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q16543 CDC37 "Hsp90 co-chaperone Cdc37" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q684M6 CDC37 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|71006 Cdc37 "cell division cycle 37" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q5EAC6 CDC37 "Hsp90 co-chaperone Cdc37" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:109531 Cdc37 "cell division cycle 37" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|O57476 CDC37 "Hsp90 co-chaperone Cdc37" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-940 cdc37 "cell division cycle 37 homolog (S. cerevisiae)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q24740 Cdc37 "Hsp90 co-chaperone Cdc37" [Drosophila virilis (taxid:7244)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O02108CDC37_CAEELNo assigned EC number0.43710.90200.8459yesN/A
Q16543CDC37_HUMANNo assigned EC number0.50650.96250.8835yesN/A
Q61081CDC37_MOUSENo assigned EC number0.50520.96250.8812yesN/A
Q24276CDC37_DROMENo assigned EC number0.52450.98550.8791yesN/A
Q63692CDC37_RATNo assigned EC number0.50520.96250.8812yesN/A
Q9DGQ7CDC37_TETFLNo assigned EC number0.50140.91930.8461N/AN/A
O57476CDC37_CHICKNo assigned EC number0.49860.88470.7811yesN/A
Q5EAC6CDC37_BOVINNo assigned EC number0.49600.96250.8789yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query347
pfam08565173 pfam08565, CDC37_M, Cdc37 Hsp90 binding domain 1e-31
smart01070155 smart01070, CDC37_M, Cdc37 Hsp90 binding domain 2e-30
smart01071154 smart01071, CDC37_N, Cdc37 N terminal kinase bindi 4e-28
pfam03234172 pfam03234, CDC37_N, Cdc37 N terminal kinase bindin 3e-26
pfam0856489 pfam08564, CDC37_C, Cdc37 C terminal domain 9e-18
smart0106993 smart01069, CDC37_C, Cdc37 C terminal domain 1e-14
PRK12704 520 PRK12704, PRK12704, phosphodiesterase; Provisional 0.002
TIGR01069771 TIGR01069, mutS2, MutS2 family protein 0.003
>gnl|CDD|219906 pfam08565, CDC37_M, Cdc37 Hsp90 binding domain Back     alignment and domain information
 Score =  116 bits (293), Expect = 1e-31
 Identities = 65/176 (36%), Positives = 86/176 (48%), Gaps = 49/176 (27%)

Query: 128 NKKPPLQQGEKSDEEKEQEMKAFVKENEKLIK---------------------------- 159
           NKK      +K+DEE E +MK FV  NEKL                              
Sbjct: 1   NKKKE---KDKTDEEDEDKMKKFVTTNEKLNSAVDKDDDDELKLSPATEKFGKIPAGDYK 57

Query: 160 ---------------QYANYLVIWCINLAMDEKFDLMDHVAHQCICMQYLLELSKSLNI- 203
                          Q  + LV+   +L ++ K +LM  VAHQ I MQY+LEL+KSL + 
Sbjct: 58  DSEKFLSEHPHIVSEQTKDALVMEAFDLQLEGKEELMRQVAHQSILMQYILELAKSLKVD 117

Query: 204 -DPRACIGSFFSKI-QIAEPDYKASFDDELKSFKERIRNRAKEKLDEALKEVEEEE 257
              R CI  FF KI   AEP YK +F DE+++F  RI+ RA+E + EA++E EEEE
Sbjct: 118 PALRNCIRLFFKKIFAKAEPMYKEAFLDEVQAFFNRIKTRAQELIQEAMEEQEEEE 173


Cdc37 is a molecular chaperone required for the activity of numerous eukaryotic protein kinases. This domains corresponds to the Hsp90 chaperone (Heat shocked protein 90) binding domain of Cdc37. It is found between the N terminal Cdc37 domain pfam03234, which is predominantly involved in kinase binding, and the C terminal domain of Cdc37 pfam08564 whose function is unclear. Length = 173

>gnl|CDD|215010 smart01070, CDC37_M, Cdc37 Hsp90 binding domain Back     alignment and domain information
>gnl|CDD|198139 smart01071, CDC37_N, Cdc37 N terminal kinase binding Back     alignment and domain information
>gnl|CDD|217443 pfam03234, CDC37_N, Cdc37 N terminal kinase binding Back     alignment and domain information
>gnl|CDD|219905 pfam08564, CDC37_C, Cdc37 C terminal domain Back     alignment and domain information
>gnl|CDD|215009 smart01069, CDC37_C, Cdc37 C terminal domain Back     alignment and domain information
>gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional Back     alignment and domain information
>gnl|CDD|130141 TIGR01069, mutS2, MutS2 family protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 347
KOG2260|consensus372 100.0
PF03234177 CDC37_N: Cdc37 N terminal kinase binding; InterPro 100.0
PF08565173 CDC37_M: Cdc37 Hsp90 binding domain; InterPro: IPR 100.0
PF0856499 CDC37_C: Cdc37 C terminal domain; InterPro: IPR013 99.88
KOG2260|consensus372 98.65
PF1264398 MazG-like: MazG-like family 80.85
>KOG2260|consensus Back     alignment and domain information
Probab=100.00  E-value=5e-82  Score=610.87  Aligned_cols=327  Identities=48%  Similarity=0.775  Sum_probs=300.9

Q ss_pred             CCCccCCCccccCCCCC-CCCCCCCchhhhhHhhHHHHHhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhccccH
Q psy157            1 MVDYSKWKDIEISDDED-ETHPNIDTPSLFRWRHQARVERMEEQRLENEKFQQEKEKTLKTLEETKKKLVESEQAGANNL   79 (347)
Q Consensus         1 ~iDYSKWd~iElSDDeD-e~HPNVDk~S~~RwkHq~R~eR~~e~~~e~e~l~~~~~~~~~~l~e~~~~l~~~~~~~~e~~   79 (347)
                      ||||||||+|||||||| |||||||||||||||||+|.+||++.+|++++|++++.+|.+++.+++++|+.|..+   ..
T Consensus         2 ~iDySkwd~iElSDDeD~evHPNiD~~Sl~rWr~Q~r~Err~~~~q~~eei~k~~~~~~~ll~e~~e~l~~l~~~---~~   78 (372)
T KOG2260|consen    2 AIDYSKWDKIELSDDEDVEVHPNIDKPSLIRWRQQARHERRAERKQEQEEIKKSKDMYSRLLEEVQEILSNLEVS---SL   78 (372)
T ss_pred             CCCcccccccccccccccccCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc---cc
Confidence            59999999999999999 999999999999999999999999999999999999999999999999999998655   23


Q ss_pred             HHHHHHHHHHHH------HHHHHHHHHHHHhhhhhcCCCccccCCCCCCccccccCCCCCCC-CCCChHHHHHHHHHHHH
Q psy157           80 DELKKALAELEK------EAANIRKKEEDLKKKEKITPWNVDTISKPGFTKTVVNKKPPLQQ-GEKSDEEKEQEMKAFVK  152 (347)
Q Consensus        80 ~~l~~h~~kl~~------~~~e~~~Kl~eLek~Ek~~~insD~Ish~GF~kS~INk~~~~~~-~~~see~~~~~~~~F~~  152 (347)
                      ..++.++++++.      ..+.|+.++++|.+.+|..|||+|+||++||++|+||+.+.+.. ...+++...+.+..|++
T Consensus        79 s~~~~E~~k~e~~~~ei~~~e~~~~~~eeL~k~ek~~~w~tdtis~d~f~Ks~in~~s~k~~~~~~~ee~~~ek~~~f~e  158 (372)
T KOG2260|consen   79 SGLKKELEKFETVDSEIREGEAWEDKLEELEKKEKKEPWLTDTISKDAFSKSRINKKSEKKEEDKKLEEERKEKMKTFVE  158 (372)
T ss_pred             hhHHHHHHHhcccccccccchHHHHHHHHHHHHHhhCcccchhhhchhHHHHHhhcccccchhhhhhHHHHHHHhHHHHH
Confidence            355666666666      79999999999999999999999999999999999999764332 11256677899999999


Q ss_pred             HHHHHHHHH------------------------HhHHHHHHHHHhhhcchhhHhHHHHHHHHHHHHHHHHHhCCCCCcch
Q psy157          153 ENEKLIKQY------------------------ANYLVIWCINLAMDEKFDLMDHVAHQCICMQYLLELSKSLNIDPRAC  208 (347)
Q Consensus       153 k~e~~~~~F------------------------~d~Ll~~af~lemegk~~~~~qvaHQalllQyIleLa~~l~~dpr~~  208 (347)
                      +|+..+.+|                        +|||+||||++++..++.+|.++|||+++||||+|++++|+++||.|
T Consensus       159 ~~e~~~~~~~~L~~~~~sq~~l~ehp~~~~e~tan~lvi~~ln~~v~~ke~~m~~~a~q~iv~q~ilE~aKsl~~~~~~~  238 (372)
T KOG2260|consen  159 EYEKLIFHFGMLRKWDDSQKFLAEHPHLVSEETANYLVIESLNLEVPKKEELMEGNAHQCIVMQFILELAKSLKVDPRAC  238 (372)
T ss_pred             HhHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHHHHHhcccccchhHHhcccccchHHHHHHHHhhhcCcChHHH
Confidence            999999999                        99999999999999999999999999999999999999999999999


Q ss_pred             hHHhHhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCCCCcccccccccCc-HHHHHHhhhC
Q psy157          209 IGSFFSKIQIAEPDYKASFDDELKSFKERIRNRAKEKLDEALKEVEEEERQKRLGPGGLDPVEVFESLP-DVLKKCFELQ  287 (347)
Q Consensus       209 v~~FF~ki~~~~~~~~~~F~~dv~~~~~rIk~Ra~~~~~e~~~e~e~ee~q~~l~Pggldp~evFeslP-~~mq~afet~  287 (347)
                      ++.||+++..+.+.|++.|.++|.+|..|++.||+.+++.++ .++.++...++||||++|+.+|++|| .+||+||+.+
T Consensus       239 ~~~fFkk~~~~e~~y~e~~~DEleaFk~r~r~raq~k~~~~m-~~~~~e~~e~lgp~gld~~~~~e~lP~eelqr~f~~~  317 (372)
T KOG2260|consen  239 QSQFFKKAEASEEFYMEHFDDELEAFKSRLRLRAQLKIQYAM-QALYEEYAERLGPGGLDKVEFLESLPQEELKRSFEEK  317 (372)
T ss_pred             HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhhhHHHhcCCCcccHHHHHHhCcHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999988 57677788899999999999999999 9999999999


Q ss_pred             ChHHHHHHHhcCCHHHHHHHHHHhhhcCccccCccccCCCCCCCC
Q psy157          288 DTAMLQEAIASLSPEEATYHMKRCVDSGLWVPDAKKAAGESEDPQ  332 (347)
Q Consensus       288 dld~vn~vl~~M~veeAE~~~~r~~dsGlw~p~~~~~~~~~~~~~  332 (347)
                      ++.++..++.+|+++.|++||++|+++|+|+|++. ...++.||.
T Consensus       318 ~~~~l~~~~skmd~e~~k~~iqlc~~~~~~l~~~~-~~~~~~~~e  361 (372)
T KOG2260|consen  318 DVEALIGAISKMDEEDAKEQIQLCVDDPTWLPNNA-PDEGSKDPE  361 (372)
T ss_pred             HHHHHHHHHhhhchhhHHHHHHHHhcCCccccCcC-ccccCCCcc
Confidence            99999999999999999999999999999999965 344444443



>PF03234 CDC37_N: Cdc37 N terminal kinase binding; InterPro: IPR013855 In Saccharomyces cerevisiae (Baker's yeast), cell division control protein Cdc37 is required for the productive formation of Cdc28-cyclin complexes Back     alignment and domain information
>PF08565 CDC37_M: Cdc37 Hsp90 binding domain; InterPro: IPR013874 Cdc37 is a molecular chaperone required for the activity of numerous eukaryotic protein kinases Back     alignment and domain information
>PF08564 CDC37_C: Cdc37 C terminal domain; InterPro: IPR013873 Cdc37 is a protein required for the activity of numerous eukaryotic protein kinases Back     alignment and domain information
>KOG2260|consensus Back     alignment and domain information
>PF12643 MazG-like: MazG-like family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query347
1us7_B265 Complex Of Hsp90 And P50 Length = 265 8e-54
2k5b_B129 Human Cdc37-Hsp90 Docking Model Based On Nmr Length 1e-23
>pdb|1US7|B Chain B, Complex Of Hsp90 And P50 Length = 265 Back     alignment and structure

Iteration: 1

Score = 207 bits (527), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 110/246 (44%), Positives = 152/246 (61%), Gaps = 29/246 (11%) Query: 125 TVVNKKPPLQQGEKSDEEKEQEMKAFVKENEKLIKQY----------------------- 161 ++VN KP + E S+E +EQ+ K FV++ EK IK + Sbjct: 14 SMVNTKPEKTE-EDSEEVREQKHKTFVEKYEKQIKHFGMLRRWDDSQKYLSDNVHLVCEE 72 Query: 162 -ANYLVIWCINLAMDEKFDLMDHVAHQCICMQYLLELSKSLNIDPRACIGSFFSKIQIAE 220 ANYLVIWCI+L ++EK LM+ VAHQ I MQ++LEL+KSL +DPRAC FF+KI+ A+ Sbjct: 73 TANYLVIWCIDLEVEEKCALMEQVAHQTIVMQFILELAKSLKVDPRACFRQFFTKIKTAD 132 Query: 221 PDYKASFDDELKSFKERIRNXXXXXXXXXXXXXXXXXXXXXXGPGGLDPVEVFESLPDVL 280 Y F+DEL++FKER+R GPGGLDPVEV+ESLP+ L Sbjct: 133 RQYMEGFNDELEAFKERVRGRAKLRIEKAMKEYEEEERKKRLGPGGLDPVEVYESLPEEL 192 Query: 281 KKCFELQDTAMLQEAIASLSPEEATYHMKRCVDSGLWVPDAKKAAGESEDPQENTPDAED 340 +KCF+++D MLQ+AI+ + P +A YHM+RC+DSGLWVP++K A E+++ +E P D Sbjct: 193 QKCFDVKDVQMLQDAISKMDPTDAKYHMQRCIDSGLWVPNSK--ASEAKEGEEAGPG--D 248 Query: 341 PTYSAV 346 P AV Sbjct: 249 PLLEAV 254
>pdb|2K5B|B Chain B, Human Cdc37-Hsp90 Docking Model Based On Nmr Length = 129 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query347
1us7_B265 HSP90 CO-chaperone CDC37; chaperone CO-chaperone r 3e-61
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-09
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 7e-06
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 2e-04
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 6e-05
3lvg_D190 LCB, clathrin light chain B; SELF assembly, coated 1e-04
>1us7_B HSP90 CO-chaperone CDC37; chaperone CO-chaperone regulation, ATP-binding, H shock,; 2.3A {Homo sapiens} SCOP: a.205.1.1 PDB: 2k5b_B 2w0g_A Length = 265 Back     alignment and structure
 Score =  196 bits (499), Expect = 3e-61
 Identities = 115/246 (46%), Positives = 163/246 (66%), Gaps = 25/246 (10%)

Query: 121 GFTKTVVNKKPPLQQGEKSDEEKEQEMKAFVKENEKLIKQYA------------------ 162
               ++VN KP  +  E S+E +EQ+ K FV++ EK IK +                   
Sbjct: 10  HGMASMVNTKPE-KTEEDSEEVREQKHKTFVEKYEKQIKHFGMLRRWDDSQKYLSDNVHL 68

Query: 163 ------NYLVIWCINLAMDEKFDLMDHVAHQCICMQYLLELSKSLNIDPRACIGSFFSKI 216
                 NYLVIWCI+L ++EK  LM+ VAHQ I MQ++LEL+KSL +DPRAC   FF+KI
Sbjct: 69  VCEETANYLVIWCIDLEVEEKCALMEQVAHQTIVMQFILELAKSLKVDPRACFRQFFTKI 128

Query: 217 QIAEPDYKASFDDELKSFKERIRNRAKEKLDEALKEVEEEERQKRLGPGGLDPVEVFESL 276
           + A+  Y   F+DEL++FKER+R RAK ++++A+KE EEEER+KRLGPGGLDPVEV+ESL
Sbjct: 129 KTADRQYMEGFNDELEAFKERVRGRAKLRIEKAMKEYEEEERKKRLGPGGLDPVEVYESL 188

Query: 277 PDVLKKCFELQDTAMLQEAIASLSPEEATYHMKRCVDSGLWVPDAKKAAGESEDPQENTP 336
           P+ L+KCF+++D  MLQ+AI+ + P +A YHM+RC+DSGLWVP++K +  +  +      
Sbjct: 189 PEELQKCFDVKDVQMLQDAISKMDPTDAKYHMQRCIDSGLWVPNSKASEAKEGEEAGPGD 248

Query: 337 DAEDPT 342
              +  
Sbjct: 249 PLLEAV 254


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query347
1us7_B265 HSP90 CO-chaperone CDC37; chaperone CO-chaperone r 100.0
2kwv_A48 RAD30 homolog B, DNA polymerase IOTA; ubiquitin-bi 90.09
>1us7_B HSP90 CO-chaperone CDC37; chaperone CO-chaperone regulation, ATP-binding, H shock,; 2.3A {Homo sapiens} SCOP: a.205.1.1 PDB: 2k5b_B 2w0g_A Back     alignment and structure
Probab=100.00  E-value=1e-70  Score=518.69  Aligned_cols=218  Identities=55%  Similarity=0.993  Sum_probs=165.1

Q ss_pred             cccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHH------------------------HhHHHHHHHHHhhhcchh
Q psy157          124 KTVVNKKPPLQQGEKSDEEKEQEMKAFVKENEKLIKQY------------------------ANYLVIWCINLAMDEKFD  179 (347)
Q Consensus       124 kS~INk~~~~~~~~~see~~~~~~~~F~~k~e~~~~~F------------------------~d~Ll~~af~lemegk~~  179 (347)
                      .|+||.+++++++. |++++...+.+|+++|++++++|                        +||||||||++||+|+++
T Consensus        13 ~~~~~~~~~~~~~~-~eee~~~~~~~Fv~k~e~~lk~Fa~i~~y~dS~~FL~~hp~Lv~E~tad~Lli~afdlemegk~~   91 (265)
T 1us7_B           13 ASMVNTKPEKTEED-SEEVREQKHKTFVEKYEKQIKHFGMLRRWDDSQKYLSDNVHLVCEETANYLVIWCIDLEVEEKCA   91 (265)
T ss_dssp             -----------------------CHHHHHHHHHHHHHHHHCCSHHHHHHHHHTTGGGCSHHHHHHHHHHHHHHHHTTCHH
T ss_pred             HHHhcCCCcccccC-ChHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHhCCeecchhhhhHHHHHHHHHHHcCCHH
Confidence            36788766543333 66788899999999999999999                        999999999999999999


Q ss_pred             hHhHHHHHHHHHHHHHHHHHhCCCCCcchhHHhHhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Q psy157          180 LMDHVAHQCICMQYLLELSKSLNIDPRACIGSFFSKIQIAEPDYKASFDDELKSFKERIRNRAKEKLDEALKEVEEEERQ  259 (347)
Q Consensus       180 ~~~qvaHQalllQyIleLa~~l~~dpr~~v~~FF~ki~~~~~~~~~~F~~dv~~~~~rIk~Ra~~~~~e~~~e~e~ee~q  259 (347)
                      +|+|||||+||||||+|||++||++||+||++||+||++++|+|+++|++||++||+||++||+++++++++++++++.|
T Consensus        92 ~m~qvaHQ~llLQYIlELak~L~~dpr~~v~~FF~ki~~~~~~~~~~F~ddV~~~~~RIk~Ra~~~~~e~~~e~ee~eeQ  171 (265)
T 1us7_B           92 LMEQVAHQTIVMQFILELAKSLKVDPRACFRQFFTKIKTADRQYMEGFNDELEAFKERVRGRAKLRIEKAMKEYEEEERK  171 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSSCGGGTHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998877666678


Q ss_pred             hhcCCCCcccccccccCcHHHHHHhhhCChHHHHHHHhcCCHHHHHHHHHHhhhcCccccCccccCCCCCCCCCCCCCCC
Q psy157          260 KRLGPGGLDPVEVFESLPDVLKKCFELQDTAMLQEAIASLSPEEATYHMKRCVDSGLWVPDAKKAAGESEDPQENTPDAE  339 (347)
Q Consensus       260 ~~l~Pggldp~evFeslP~~mq~afet~dld~vn~vl~~M~veeAE~~~~r~~dsGlw~p~~~~~~~~~~~~~~~~~~~~  339 (347)
                      .+|||||+||++||+|||++||+||+|||||+||+||++|||++|+|||+||++||||||++++.+++++++.   | ++
T Consensus       172 ~rL~pgglDP~EVFeslP~emQ~afes~dld~lnkvl~~M~veeAe~h~~r~idsGLWvp~~~~~~~~~~~~~---~-~~  247 (265)
T 1us7_B          172 KRLGPGGLDPVEVYESLPEELQKCFDVKDVQMLQDAISKMDPTDAKYHMQRCIDSGLWVPNSKASEAKEGEEA---G-PG  247 (265)
T ss_dssp             TTCCTTSCCHHHHHHHSCTTCCCC-------CHHHHHTCCSSSHHHHHHHHHHHHTSSCCTTC-----------------
T ss_pred             hccCCCCCCHHHHHhhCCHHHHHHHHcCCHHHHHHHHHhCCHHHHHHHHHHHHHcCcccCCCCcccccccccC---C-CC
Confidence            9999999999999999999999999999999999999999999999999999999999999987543332222   2 27


Q ss_pred             CCCCccC
Q psy157          340 DPTYSAV  346 (347)
Q Consensus       340 ~~~~~~~  346 (347)
                      +|.|+.|
T Consensus       248 ~~~~~~~  254 (265)
T 1us7_B          248 DPLLEAV  254 (265)
T ss_dssp             -------
T ss_pred             cchhhcC
Confidence            7888876



>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 347
d1us7b_201 a.205.1.1 (B:) Hsp90 co-chaperone CDC37 {Human (Ho 4e-72
>d1us7b_ a.205.1.1 (B:) Hsp90 co-chaperone CDC37 {Human (Homo sapiens) [TaxId: 9606]} Length = 201 Back     information, alignment and structure

class: All alpha proteins
fold: Hsp90 co-chaperone CDC37
superfamily: Hsp90 co-chaperone CDC37
family: Hsp90 co-chaperone CDC37
domain: Hsp90 co-chaperone CDC37
species: Human (Homo sapiens) [TaxId: 9606]
 Score =  220 bits (563), Expect = 4e-72
 Identities = 107/199 (53%), Positives = 145/199 (72%), Gaps = 24/199 (12%)

Query: 148 KAFVKENEKLIKQY------------------------ANYLVIWCINLAMDEKFDLMDH 183
           K FV++ EK IK +                        ANYLVIWCI+L ++EK  LM+ 
Sbjct: 2   KTFVEKYEKQIKHFGMLRRWDDSQKYLSDNVHLVCEETANYLVIWCIDLEVEEKCALMEQ 61

Query: 184 VAHQCICMQYLLELSKSLNIDPRACIGSFFSKIQIAEPDYKASFDDELKSFKERIRNRAK 243
           VAHQ I MQ++LEL+KSL +DPRAC   FF+KI+ A+  Y   F+DEL++FKER+R RAK
Sbjct: 62  VAHQTIVMQFILELAKSLKVDPRACFRQFFTKIKTADRQYMEGFNDELEAFKERVRGRAK 121

Query: 244 EKLDEALKEVEEEERQKRLGPGGLDPVEVFESLPDVLKKCFELQDTAMLQEAIASLSPEE 303
            ++++A+KE EEEER+KRLGPGGLDPVEV+ESLP+ L+KCF+++D  MLQ+AI+ + P +
Sbjct: 122 LRIEKAMKEYEEEERKKRLGPGGLDPVEVYESLPEELQKCFDVKDVQMLQDAISKMDPTD 181

Query: 304 ATYHMKRCVDSGLWVPDAK 322
           A YHM+RC+DSGLWVP++K
Sbjct: 182 AKYHMQRCIDSGLWVPNSK 200


Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query347
d1us7b_201 Hsp90 co-chaperone CDC37 {Human (Homo sapiens) [Ta 100.0
>d1us7b_ a.205.1.1 (B:) Hsp90 co-chaperone CDC37 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: Hsp90 co-chaperone CDC37
superfamily: Hsp90 co-chaperone CDC37
family: Hsp90 co-chaperone CDC37
domain: Hsp90 co-chaperone CDC37
species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00  E-value=2.1e-69  Score=490.99  Aligned_cols=177  Identities=60%  Similarity=1.115  Sum_probs=164.9

Q ss_pred             HHHHHHHHHHHHHHH------------------------HhHHHHHHHHHhhhcchhhHhHHHHHHHHHHHHHHHHHhCC
Q psy157          147 MKAFVKENEKLIKQY------------------------ANYLVIWCINLAMDEKFDLMDHVAHQCICMQYLLELSKSLN  202 (347)
Q Consensus       147 ~~~F~~k~e~~~~~F------------------------~d~Ll~~af~lemegk~~~~~qvaHQalllQyIleLa~~l~  202 (347)
                      +++|+++|++++++|                        +|||||||||+||+||+++|+||||||+|||||++||++++
T Consensus         1 ~~~F~~k~~~~~k~Fg~l~~y~~S~~FL~~hp~l~~E~t~d~Ll~~af~~qmegk~~~~~qvaHQ~llmQyi~eLak~~~   80 (201)
T d1us7b_           1 HKTFVEKYEKQIKHFGMLRRWDDSQKYLSDNVHLVCEETANYLVIWCIDLEVEEKCALMEQVAHQTIVMQFILELAKSLK   80 (201)
T ss_dssp             CHHHHHHHHHHHHHHHHCCSHHHHHHHHHTTGGGCSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             CchHHHHHHHHHHHHHcccCHHHHHHHHHhCchhcchhhhcHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            368999999999999                        99999999999999999999999999999999999999999


Q ss_pred             CCCcchhHHhHhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCCCCcccccccccCcHHHHH
Q psy157          203 IDPRACIGSFFSKIQIAEPDYKASFDDELKSFKERIRNRAKEKLDEALKEVEEEERQKRLGPGGLDPVEVFESLPDVLKK  282 (347)
Q Consensus       203 ~dpr~~v~~FF~ki~~~~~~~~~~F~~dv~~~~~rIk~Ra~~~~~e~~~e~e~ee~q~~l~Pggldp~evFeslP~~mq~  282 (347)
                      +|||+||++||+||++++++|+++|++||++||+|||.||+++++++..+.++++++.++||||+||++||+|||++||+
T Consensus        81 ~~pr~~v~~FF~ki~~~~~~y~~~F~~dv~~~~~Rik~Ra~~~~~e~~~e~e~ee~~~r~gPggldp~eVFeslP~emQ~  160 (201)
T d1us7b_          81 VDPRACFRQFFTKIKTADRQYMEGFNDELEAFKERVRGRAKLRIEKAMKEYEEEERKKRLGPGGLDPVEVYESLPEELQK  160 (201)
T ss_dssp             SCGGGTHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSCCHHHHHHHSCTTCCC
T ss_pred             CChHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchhhhcCCCCCCCHHHHHHhCCHHHHH
Confidence            99999999999999999999999999999999999999999999999988888889999999999999999999999999


Q ss_pred             HhhhCChHHHHHHHhcCCHHHHHHHHHHhhhcCccccCccc
Q psy157          283 CFELQDTAMLQEAIASLSPEEATYHMKRCVDSGLWVPDAKK  323 (347)
Q Consensus       283 afet~dld~vn~vl~~M~veeAE~~~~r~~dsGlw~p~~~~  323 (347)
                      ||+|||||+||+||++|||++|||||+||||||||||+++.
T Consensus       161 afes~dld~ln~vl~~M~~eeAe~h~~rcidsGlwvp~~~~  201 (201)
T d1us7b_         161 CFDVKDVQMLQDAISKMDPTDAKYHMQRCIDSGLWVPNSKA  201 (201)
T ss_dssp             C-------CHHHHHTCCSSSHHHHHHHHHHHHTSSCCTTC-
T ss_pred             HHhcCCHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCCC
Confidence            99999999999999999999999999999999999999863