Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
ID Alignment Graph Length
Definition
E-value
Query 117
pfam04547 449
pfam04547, Anoctamin, Calcium-activated chloride c
6e-24
>gnl|CDD|218140 pfam04547, Anoctamin, Calcium-activated chloride channel
Back Hide alignment and domain information
Score = 94.2 bits (235), Expect = 6e-24
Identities = 37/116 (31%), Positives = 66/116 (56%), Gaps = 8/116 (6%)
Query: 1 MAAFWALINNMLEVRSDAFKLCCLYQRPIARRVKNIGAWQVLFLFVVFEHIL---LLLRY 57
+A ALINN++E+RSDAFKLC ++RP+ +R +IG W + + + ++ L+ +
Sbjct: 334 LAPLLALINNIIEIRSDAFKLCYEFRRPVPQRADSIGPWLDILELLSWLSVITNAGLIAF 393
Query: 58 VLVYCISDKPHW-----VLFLFVVFEHILLLLRYVLVYCISDKPHWVRVALAKLNY 108
+ + L F++ EH++LLL++++ + I D P WVR+ L + Y
Sbjct: 394 TSTGTLKGYLNDHLLAARLLFFLILEHVVLLLKFLIAWLIPDIPEWVRIKLKREKY 449
The family carries eight putative transmembrane domains, and, although it has no similarity to other known channel proteins, it is clearly a calcium-activated ionic channel. It is expressed in various secretory epithelia, the retina and sensory neurons, and mediates receptor-activated chloride currents in diverse physiological processes. Length = 449
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
>PF04547 Anoctamin: Calcium-activated chloride channel; InterPro: IPR007632 This family contains the anoctamin/TMEM16 proteins which are thought to be calcium-dependent chloride channel []
Back Hide alignment and domain information
Probab=99.98 E-value=2.4e-32 Score=222.15 Aligned_cols=108 Identities=35% Similarity=0.770 Sum_probs=100.2
Q ss_pred ChhHHHHHHHHHHHhhhHhhhhhhhcCCCccccCChhhHHHHHHHHHH-----HHHHHhhh---hhhcccCCCchhHHHH
Q psy15815 1 MAAFWALINNMLEVRSDAFKLCCLYQRPIARRVKNIGAWQVLFLFVVF-----EHILLLLR---YVLVYCISDKPHWVLF 72 (117)
Q Consensus 1 Lapl~alinN~iEir~Da~Kl~~~~rRP~p~~~~~IG~W~~il~~i~~-----N~~li~~t---~~~~~~p~~~~~~~l~ 72 (117)
|||++|++||++|+|+|++|+++.+|||.|++++|||+|+++|+++++ ||++++++ ++..++|+.....+++
T Consensus 337 lapl~allnN~~eir~D~~Kl~~~~rRP~p~~~~~IG~W~~il~~i~~lav~tN~~li~~~s~~~~~~~~~~~~~~~~~~ 416 (452)
T PF04547_consen 337 LAPLFALLNNIVEIRLDAFKLLYLYRRPVPRRASSIGIWNNILEIISWLAVITNAALIAFTSDGQLQGYFPDSSLAQRLL 416 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHHhhhcchhhhhcccchHHHHHH
Confidence 699999999999999999999999999999999999999999999999 99999999 2566776644455679
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHH
Q psy15815 73 LFVVFEHILLLLRYVLVYCISDKPHWVRVALAKLNY 108 (117)
Q Consensus 73 ~~i~~EH~~~~lk~~l~~~Ipd~P~~V~~~~~r~~~ 108 (117)
+++++||+++++|++++++|||+|+||+++++|++|
T Consensus 417 ~~l~~eh~~~~~~~~i~~~ipd~P~~v~~~~~r~~Y 452 (452)
T PF04547_consen 417 FFLVFEHVVFFLKYLISWLIPDVPKWVRIQIQREEY 452 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhcC
Confidence 999999999999999999999999999999999997
>KOG2513|consensus
Back Show alignment and domain information
Probab=99.97 E-value=4.8e-30 Score=213.22 Aligned_cols=116 Identities=39% Similarity=0.717 Sum_probs=106.3
Q ss_pred ChhHHHHHHHHHHHhhhHhhhhhhhcCCCccccCChhhHHHHHHHHHH-----HHHHHhhh-hhhcccCCCchhHHHHHH
Q psy15815 1 MAAFWALINNMLEVRSDAFKLCCLYQRPIARRVKNIGAWQVLFLFVVF-----EHILLLLR-YVLVYCISDKPHWVLFLF 74 (117)
Q Consensus 1 Lapl~alinN~iEir~Da~Kl~~~~rRP~p~~~~~IG~W~~il~~i~~-----N~~li~~t-~~~~~~p~~~~~~~l~~~ 74 (117)
|||++|++||++|+|+|++|+|...|||+|+|+++||+|+++++++++ ||+|++++ +..+.+|--++....+.+
T Consensus 496 LA~~~aLvnNv~eirsda~Kl~~~~krPfp~r~~~IG~Wq~~l~~lSvls~vtncaLi~~~~~~~~~~~~~s~~~~il~~ 575 (647)
T KOG2513|consen 496 LAAIFALVNNVIEIRSDALKLCLVLKRPFPRRVANIGAWQNALELLSVLSCVTNCALIGMYPQVNKLWPLLSPENAILII 575 (647)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHhcCCCCcchhhhhHHHHHHHHHHHHHHHHHhHHHHhccccccccCcccchHHHHHHH
Confidence 799999999999999999999999999999999999999999999999 99999999 777666632333345788
Q ss_pred HHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhc
Q psy15815 75 VVFEHILLLLRYVLVYCISDKPHWVRVALAKLNYQSRQALKN 116 (117)
Q Consensus 75 i~~EH~~~~lk~~l~~~Ipd~P~~V~~~~~r~~~~~~~~l~~ 116 (117)
+++||+.+++|+++.++|||.|.||+..+.|.+++.+++++.
T Consensus 576 V~~EH~~l~Lkflis~vipe~p~wva~~~~k~~~~~~e~~~k 617 (647)
T KOG2513|consen 576 VILEHVLLLLKFLISSVIPESPRWVAAGIAKAEFQAREAFKK 617 (647)
T ss_pred HHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHhhhH
Confidence 999999999999999999999999999999999999999874
>KOG2514|consensus
Back Show alignment and domain information
Probab=99.92 E-value=5.7e-26 Score=193.51 Aligned_cols=117 Identities=26% Similarity=0.461 Sum_probs=102.5
Q ss_pred ChhHHHHHHHHHHHhhhHhhhhhhhcCCCccccCChhhHHHHHHHHHH-----HHHHHhhh-h-----hhc--ccCC---
Q psy15815 1 MAAFWALINNMLEVRSDAFKLCCLYQRPIARRVKNIGAWQVLFLFVVF-----EHILLLLR-Y-----VLV--YCIS--- 64 (117)
Q Consensus 1 Lapl~alinN~iEir~Da~Kl~~~~rRP~p~~~~~IG~W~~il~~i~~-----N~~li~~t-~-----~~~--~~p~--- 64 (117)
|||++|++||++|+|.||+||++..|||++.|+.+||.|+.++++|+. |+++|++| + +++ ++.+
T Consensus 617 LaplfaLLnniieirlda~Kl~t~~rRpv~~r~~diG~W~~il~~i~~lavi~nafiIa~tsd~Iprlvy~~k~s~~~~~ 696 (861)
T KOG2514|consen 617 LAPLFALLNNIIEIRLDAKKLVTQKRRPVAARAVDIGAWYGILQGIGKLAVITNAFIIAFTSDFIPRLVYEFKYSKSQPR 696 (861)
T ss_pred hHHHHHHHHHHHhhhhhHHHHHHhhhcchhHHHhhhhhhHhhhcceeeEEeecceeeeeeeccchhhhhheeEeccCCCc
Confidence 799999999999999999999999999999999999999999999999 99999998 4 121 1100
Q ss_pred ----------------------------C--c---------------------h-------h---HHHHHHHHHHHHHHH
Q psy15815 65 ----------------------------D--K---------------------P-------H---WVLFLFVVFEHILLL 83 (117)
Q Consensus 65 ----------------------------~--~---------------------~-------~---~~l~~~i~~EH~~~~ 83 (117)
+ + | + -+++|++++||+++.
T Consensus 697 ~~S~~tl~gy~n~tlS~f~~sd~~~~~~~~~d~~~~~tCrYrdyR~pP~s~~pY~~s~~~whvlAarLaFiiVfehlV~~ 776 (861)
T KOG2514|consen 697 MRSFGTLLGYVNHTLSIFNVSDFKEEKSGESDPADLTTCRYRDYRIPPWSPEPYGLSIQYWHVLAARLAFVIVFENLVFE 776 (861)
T ss_pred ccccchhhhhhhccccccchhhccCCCCCCCCccccceeeeccccCCCCCccccccchhHHHHHHHHhhHHHHHHHHHHH
Confidence 0 0 0 1 148999999999999
Q ss_pred HHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhcC
Q psy15815 84 LRYVLVYCISDKPHWVRVALAKLNYQSRQALKNQ 117 (117)
Q Consensus 84 lk~~l~~~Ipd~P~~V~~~~~r~~~~~~~~l~~~ 117 (117)
+|.+++++|||+|++++++++||+|+..+.++++
T Consensus 777 ik~~i~~~IPDvPk~l~dqi~REkyL~~e~~~e~ 810 (861)
T KOG2514|consen 777 IKELVSWTIPDVPKDLKDQIRREKYLAQELFYET 810 (861)
T ss_pred HHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998863
Homologous Structure Domains