Psyllid ID: psy15877

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------
Protein Sequence
MNTGPNITTGPASPNMNTSNVKPGSTSPNITTGPNIATSSPSDITTHSLVLSISNTSNVKPGSTSPNVTTAPVSPNITTGPNVATSSPSDITTHSLVLSISPNLDTVLSLIKNTSNVKPGSTSPNVNTAPTSPNITTGPNIATSSPSDITTHSLVLSISPNLDTVLSLIKIIWAASRGDFEMKAAPVEVFTRRTNEMFALDGEENSSAPGGDNAQGDTKDIDLDDILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLLLCDEKIIRACVQEQLTLSVTLSYAYASNAEQACLVAFLQLLFPLLTSDALETRVYTKSAEYFQLFCRTLNFVSSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKSGQRDILLQGHLSIVKELVCFLNSEKKMEFGVTNGLIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVCQSPESISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCAEPLTEWDYLPPIGPKPPKGFVWPKSKVK
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHcccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccHHHHHHcccccHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHcccccHHHHccccccHHHHHHHccccccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccHHccccccccccccccccccccHHHHHHHHHHHHHHHcccccEcccccHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccHHHHHcccccHHHHHHHHHHHHHHHccccccccccEccccccHHHHHHHHHHHHHHccHcccccccccHHHHHHHHHHHHHHHHcccHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccccccHHcccccccccccccccccccccc
Coil and Loop (DISEMBL)
mntgpnittgpaspnmntsnvkpgstspnittgpniatsspsdittHSLVLSIsntsnvkpgstspnvttapvspnittgpnvatsspsdittHSLVLSISPNLDTVLSLIKntsnvkpgstspnvntaptspnittgpniatsspsdittHSLVLSISPNLDTVLSLIKIIWAAsrgdfemkaapVEVFTRRTNEMfaldgeenssapggdnaqgdtkdidldDILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLLLCDEKIIRACVQEQLTLSVTLSYAYASNAEQACLVAFLQLLFPlltsdaletrVYTKSAEYFQLFCRTLNFVSSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSvgakksgqrdilLQGHLSIVKELVCFLNSEKKMEFGVTNGLIRDLINDYLFPTSKLMLKLEKtgeisfneiapavcqspesiSAGFSLLIGLCTGSVPNLKLLVAMLTdmfypdcaepltewdylppigpkppkgfvwpkskvk
Flexible Loop (DISEMBL)
mntgpnittgpaspnmntsnVKPGSTSPNITTGPNIATSSPSDITTHSLVLSISNTsnvkpgstspnvttapvspnittgpnvATSSPSDITTHSLVLSISPNLDTVLSLIKNTsnvkpgstspnvntaptspnittgpniATSSPSDITTHSLVLSISPNLDTVLSLIKIIWAASRGDFEMKAAPVEVFTRRTNEMFALdgeenssapggdnaqgdTKDIDLDDILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLLLCDEKIIRACVQEQLTLSVTLSYAYASNAEQACLVAFLQLLFPLLTSDALETRVYTKSAEYFQLFCRTLNFVSSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLsvgakksgqrdillqgHLSIVKELVCFLNSEKKMEFGVTNGLIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVCQSPESISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCAEPLTEWDYLPPigpkppkgfvwpkskvk
Low Complexity Region (SEG)
MNTGPNITTGPASPNMNTSNVKPGSTSPNITTGPNIATSSPSDITTHSLVLSISNTSNVKPGSTSPNVTTAPVSPNITTGPNVATSSPSDITTHSLVLSISPNLDTVLSLIKNTSNVKPGSTSPNVNTAPTSPNITTGPNIATSSPSDITTHSLVLSISPNLDTVLSLIKIIWAASRGDFEMKAAPVEVFTRRTNEMFALDGEENSSAPGGDNAQGDTKDIDLDDILVCKEALELLTVCFllnnsllkallkEPKERLFAHFLCDTLLLCDEKIIRACVQEQLTLSVTLSYAYASNAEQAClvaflqllfpllTSDALETRVYTKSAEYFQLFCRTLNFVSSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKSGQRDILLQGHLSIVKELVCFLNSEKKMEFGVTNGLIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVCQSPESISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCAEPLTEWDYLPPIGPKPPKGFVWPKSKVK
Disordered region (IsUnstruct)
**********************************************************************************************SLVLSISPNLDTVLSLI**************************************TTHSLVLSISPNLDTVLSLIKIIWAASRGDFEMKAAPVEVFTRRT**************************IDLDDILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLLLCDEKIIRACVQEQLTLSVTLSYAYASNAEQACLVAFLQLLFPLLTSDALETRVYTKSAEYFQLFCRTLNFVSSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKSGQRDILLQGHLSIVKELVCFLNSEKKMEFGVTNGLIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVCQSPESISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCAEPLTEWDYLPPIG***************
Disordered Region (DISOPRED)
**************************************************************************************************************************************************************SPNLDTVLSLIKIIWA*************************************************DDILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLLLCDEKIIRACVQEQLTLSVTL***********CLVAFLQLLFPLLT**********KSAEYFQLFCRTLNFVSSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVG****GQRDILLQGHLSIVKELVCFLNSEKKMEFGVTNGLIRDLINDYLFPTSKLM**********************ESISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCAEPLTEWDYLPPIGPKPPKGFVWPKSKV*
Disordered Region (DISEMBL)
MNTGPNITTGPASPNMNTSNVKPGSTSPNITTGPNIATSSPSDITTHSLVLSISNT***********VTTAPVSPNITTGPNVATSSPSDITTHSLVLSISPNLDTVLSLIKNTS**********VNTAPTSPNITTGPNIATSSPSDITTHSLVLSISPNLDTVLSLIKIIWAASRGDFEMKAAPVEVFTRRTNEMFALDGEENSSAPGGDNAQGDTKDIDLDDILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLLLCDEKIIRACVQEQLTLSVTLSYAYASNAEQACLVAFLQLLFPLLTSDALETRVYTKSAEYFQLFCRTLNFVSSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKSGQRDILLQGHLSIVKELVCFLNSEKKMEFGVTNGLIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVCQSPESISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCAEPLTEWDYLPPIGPKPPKGFVWPKSKVK
Disordered Region (DISPRO)
**********************************************************************************************************VL*****************************************TTHSLVLSISPNLDTVLSLIKIIWAASRGDFEMKAAPVEVFTRRTNE************************IDLDDILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLLLCDEKIIRACVQEQLTLSVTLSYAYASNAEQACLVAFLQLLFPLLTSDALETRVYTKSAEYFQLFCRTLNFVSSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKSGQRDILLQGHLSIVKELVCFLNSEKKMEFGVTNGLIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVCQSPESISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCAEPLTEWDYLPPIGPKPPKG*********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNTGPNITTGPASPNMNTSNVKPGSTSPNITTGPNIATSSPSDITTHSLVLSISNTSNVKPGSTSPNVTTAPVSPNITTGPNVATSSPSDITTHSLVLSISPNLDTVLSLIKNTSNVKPGSTSPNVNTAPTSPNITTGPNIATSSPSDITTHSLVLSISPNLDTVLSLIKIIWAASRGDFEMKAAPVEVFTRRTNEMFALDGEENSSAPGGDNAQGDTKDIDLDDILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLLLCDEKIIRACVQEQLTLSVTLSYAYASNAEQACLVAFLQLLFPLLTSDALETRVYTKSAEYFQLFCRTLNFVSSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKSGQRDILLQGHLSIVKELVCFLNSEKKMEFGVTNGLIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVCQSPESISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCAEPLTEWDYLPPIGPKPPKGFVWPKSKVK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	517	2.2.26 [Sep-21-2011]
Q93008	2570	Probable ubiquitin carbox	yes	N/A	0.595	0.119	0.367	2e-49
O00507	2555	Probable ubiquitin carbox	no	N/A	0.597	0.120	0.365	5e-49
P70398	2559	Probable ubiquitin carbox	yes	N/A	0.595	0.120	0.359	7e-48
P55824	2778	Probable ubiquitin carbox	yes	N/A	0.667	0.124	0.297	1e-38
Q9UPU5	2620	Ubiquitin carboxyl-termin	no	N/A	0.524	0.103	0.294	4e-15
B1AY13	2617	Ubiquitin carboxyl-termin	no	N/A	0.632	0.124	0.263	3e-14

>sp|Q93008|USP9X_HUMAN Probable ubiquitin carboxyl-terminal hydrolase FAF-X OS=Homo sapiens GN=USP9X PE=1 SV=3

 Score =  197 bits (501), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 135/367 (36%), Positives = 194/367 (52%), Gaps = 59/367 (16%)

Query: 160  PNLDTVLSLIKIIWAASRGDFEMKAAPVEVFTRRTNEMFALDGEENSSAPGGDNAQGDTK 219
            P++  + ++ KIIWA+  G  ++  +P E  T+   +  A  G E               
Sbjct: 1234 PDICVIRAIQKIIWASGCGSLQLVFSPNEEITKIYEKTNA--GNEP-------------- 1277

Query: 220  DIDLDDILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLLLCDEKIIRACV 279
              DL+D  VC EALE++T+CF L  + L AL    KE+ +  F+ D LL C  K +R   
Sbjct: 1278 --DLEDEQVCCEALEVMTLCFALIPTALDAL---SKEKAWQTFIIDLLLHCHSKTVRQVA 1332

Query: 280  QEQLTLSVTLSYAYASNAEQAC-----LVAFLQLLFPLLTSDALETRVYTKSAEYFQLFC 334
            QEQ  L  T          + C     L+ F+ LLF +L S A E   +  S +YF L  
Sbjct: 1333 QEQFFLMCT----------RCCMGHRPLLFFITLLFTVLGSTARERAKH--SGDYFTLLR 1380

Query: 335  RTLNFV-SSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKSGQRDI---LLQGHL 390
              LN+  +S++ +    VL         L  E+  LKR+    K++G+  I   +L+GHL
Sbjct: 1381 HLLNYAYNSNINVPNAEVL---------LNNEIDWLKRIRDDVKRTGETGIEETILEGHL 1431

Query: 391  SIVKELVCFLNSEKKMEFGVTNG---LIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPA 447
             + KEL+ F  SEKK   G   G   LI++LI+D++FP S + L+  + GE+   +  P 
Sbjct: 1432 GVTKELLAFQTSEKKFHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIP- 1490

Query: 448  VCQSPESISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCA----EPLTEWDYLPPIGP 503
            VC SP +I+AGF LL+ L  G V NLK +V  LT+M+Y   A    E LTEW+YLPP+GP
Sbjct: 1491 VCGSPPTINAGFELLVALAVGCVRNLKQIVDSLTEMYYIGTAITTCEALTEWEYLPPVGP 1550

Query: 504  KPPKGFV 510
            +PPKGFV
Sbjct: 1551 RPPKGFV 1557

Deubiquitinase involved both in the processing of ubiquitin precursors and of ubiquitinated proteins. May therefore play an important role regulatory role at the level of protein turnover by preventing degradation of proteins through the removal of conjugated ubiquitin. Essential component of TGF-beta/BMP signaling cascade. Regulates chromosome alignment and segregation in mitosis by regulating the localization of BIRC5/survivin to mitotic centromeres. Specifically hydrolyzes both 'Lys-29'- and 'Lys-33'-linked polyubiquitins chains. Specifically deubiquitinates monoubiquitinated SMAD4, opposing the activity of E3 ubiquitin-protein ligase TRIM33.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 4EC: .EC: 1EC: 9EC: .EC: 1EC: 2

>sp|O00507|USP9Y_HUMAN Probable ubiquitin carboxyl-terminal hydrolase FAF-Y OS=Homo sapiens GN=USP9Y PE=1 SV=2

 Score =  196 bits (497), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 134/367 (36%), Positives = 197/367 (53%), Gaps = 58/367 (15%)

Query: 160  PNLDTVLSLIKIIWAASRGDFEMKAAPVEVFTRRTNEMFALDGEENSSAPGGDNAQGDTK 219
            P++  + ++ KIIWA++ G   +  +P E  T+    ++ +          G N      
Sbjct: 1235 PDICVIRAIQKIIWASACGALGLVFSPNEEITK----IYQM-------TTNGSNK----- 1278

Query: 220  DIDLDDILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLLLCDEKIIRACV 279
             ++++D  VC EALE++T+CF L  + L AL    KE+ +  F+ D LL C  K +R   
Sbjct: 1279 -LEVEDEQVCCEALEVMTLCFALLPTALDAL---SKEKAWQTFIIDLLLHCPSKTVRQLA 1334

Query: 280  QEQLTLSVTLSYAYASNAEQAC-----LVAFLQLLFPLLTSDALETRVYTKSAEYFQLFC 334
            QEQ  L  T          + C     L+ F+ LLF +L S A E   Y  S +YF L  
Sbjct: 1335 QEQFFLMCT----------RCCMGHRPLLFFITLLFTILGSTAREKGKY--SGDYFTLLR 1382

Query: 335  RTLNFV-SSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKSGQRDI---LLQGHL 390
              LN+  + ++ I    VL         L  E+  LKR+    K +G+  +   +L+GHL
Sbjct: 1383 HLLNYAYNGNINIPNAEVL---------LVSEIDWLKRIRDNVKNTGETGVEEPILEGHL 1433

Query: 391  SIVKELVCFLNSEKKMEFGVTNG---LIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPA 447
             + KEL+ F  SEKK  FG   G   LI++LI+D++FP SK+ L+  ++GE+   +  P 
Sbjct: 1434 GVTKELLAFQTSEKKYHFGCEKGGANLIKELIDDFIFPASKVYLQYLRSGELPAEQAIP- 1492

Query: 448  VCQSPESISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCA----EPLTEWDYLPPIGP 503
            VC SP +I+AGF LL+ L  G V NLK +V  LT+M+Y   A    E LTEW+YLPP+GP
Sbjct: 1493 VCSSPVTINAGFELLVALAIGCVRNLKQIVDCLTEMYYMGTAITTCEALTEWEYLPPVGP 1552

Query: 504  KPPKGFV 510
            +PPKGFV
Sbjct: 1553 RPPKGFV 1559

May function as a ubiquitin-protein or polyubiquitin hydrolase involved both in the processing of ubiquitin precursors and of ubiquitinated proteins. May therefore play an important role regulatory role at the level of protein turnover by preventing degradation of proteins through the removal of conjugated ubiquitin. Essential component of TGF-beta/BMP signaling cascade. Deubiquitinates monoubiquitinated SMAD4, opposing the activity of E3 ubiquitin-protein ligase TRIM33. Monoubiquitination of SMAD4 hampers its ability to form a stable complex with activated SMAD2/3 resulting in inhibition of TGF-beta/BMP signaling cascade. Deubiqitination of SMAD4 by USP9X re-empowers its competence to mediate TGF-beta signaling.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: 1

EC: 2

>sp|P70398|USP9X_MOUSE Probable ubiquitin carboxyl-terminal hydrolase FAF-X OS=Mus musculus GN=Usp9x PE=1 SV=2

 Score =  192 bits (487), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 132/367 (35%), Positives = 192/367 (52%), Gaps = 59/367 (16%)

Query: 160  PNLDTVLSLIKIIWAASRGDFEMKAAPVEVFTRRTNEMFALDGEENSSAPGGDNAQGDTK 219
            P++  + ++ KIIW +  G  ++  +P E  T+   +  A  G E               
Sbjct: 1234 PDICVIRAIQKIIWTSGCGGLQLVFSPNEEVTKIYEKTNA--GNEP-------------- 1277

Query: 220  DIDLDDILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLLLCDEKIIRACV 279
              DL+D  VC EALE++T+CF L  + L AL    KE+ +  F+ D LL C  K +R   
Sbjct: 1278 --DLEDEQVCCEALEVMTLCFALIPTALDAL---SKEKAWQTFIIDLLLHCHSKTVRQVA 1332

Query: 280  QEQLTLSVTLSYAYASNAEQAC-----LVAFLQLLFPLLTSDALETRVYTKSAEYFQLFC 334
            QEQ  L  T          + C     L+ F+ LLF +L S A E   +  S +YF L  
Sbjct: 1333 QEQFFLMCT----------RCCMGHRPLLFFITLLFTVLGSTARERAKH--SGDYFTLLR 1380

Query: 335  RTLNFV-SSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKSGQ---RDILLQGHL 390
              LN+  +S++ +    VL         L  E+  LKR+    K++G+    + +L+GHL
Sbjct: 1381 HLLNYAYNSNINVPNAEVL---------LNNEIDWLKRIRDDVKRTGETGVEETILEGHL 1431

Query: 391  SIVKELVCFLNSEKKMEFGVTNG---LIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPA 447
             + KEL+ F   EKK   G   G   LI++LI+D++FP S + L+  + GE+   +  P 
Sbjct: 1432 GVTKELLAFQTPEKKFHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIP- 1490

Query: 448  VCQSPESISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCA----EPLTEWDYLPPIGP 503
            VC SP +I+AGF LL+ L  G V NLK +V  LT+M+Y   A    E LTEW+YLPP+GP
Sbjct: 1491 VCGSPATINAGFELLVALAVGCVRNLKQIVDSLTEMYYIGTAITTCEALTEWEYLPPVGP 1550

Query: 504  KPPKGFV 510
            +PPKGFV
Sbjct: 1551 RPPKGFV 1557

Deubiquitinase involved both in the processing of ubiquitin precursors and of ubiquitinated proteins. May therefore play an important role regulatory role at the level of protein turnover by preventing degradation of proteins through the removal of conjugated ubiquitin. Essential component of TGF-beta/BMP signaling cascade. Regulates chromosome alignment and segregation in mitosis by regulating the localization of BIRC5/survivin to mitotic centromeres. Specifically hydrolyzes both 'Lys-29'- and 'Lys-33'-linked polyubiquitins chains. Specifically deubiquitinates monoubiquitinated SMAD4, opposing the activity of E3 ubiquitin-protein ligase TRIM33.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: 1

EC: 2

>sp|P55824|FAF_DROME Probable ubiquitin carboxyl-terminal hydrolase FAF OS=Drosophila melanogaster GN=faf PE=1 SV=2

 Score =  161 bits (407), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 195/420 (46%), Gaps = 75/420 (17%)

Query: 108  LSLIKNTSNVKPGSTSPNVNTAPTSPNITTGPNIATSSPSDITTHSLVLSI----SPNLD 163
            + ++K   +  P S+   +        +     + ++SP      +L  S      P++ 
Sbjct: 1305 VDILKQNFSTMPSSSQGTLRAISAKLAVILAREMLSASPEGDRCRTLFSSTLQWSCPDIS 1364

Query: 164  TVLSLIKIIWAASRGDFEMKAAPVEVFTRRTNEMFALDGEENSSAPGGDNAQGDTKDI-- 221
            T+ +++++ WA+S G                          N  A G  N+ GD +D   
Sbjct: 1365 TIKAVVQLAWASSCG--------------------------NLQALG--NSSGDFEDEVI 1396

Query: 222  --DLDDILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLLLCDEKIIRACV 279
              D  D  +CKEALE+LT+ F+LN S  +AL  +P    +  F+   +L    + +R   
Sbjct: 1397 VPDGQDFSMCKEALEVLTISFILNPSANEALTSDPN---WPKFITSIVLKNPLRHVRQVA 1453

Query: 280  QEQLTLSVTLS------YAYASNAEQACLVAFLQLLFPLLTSDALETRVYTKSAEYFQLF 333
             EQL L+ T        + Y  N     LV  L+ L P   S           AE+F + 
Sbjct: 1454 SEQLFLASTYCAGDRRPFVYMVN----LLVGALKTLVPQYESTC---------AEFFSVL 1500

Query: 334  CRTLNFVSSSVWIGAGSVLSTGIDV-EKYLTQELAVLKRLSVGAKKSGQRDI---LLQGH 389
            CRTL++         G + +  + + E  L  E+  L+R+      +G   +   LL+GH
Sbjct: 1501 CRTLSY---------GCIYNWPLQISEGLLGDEIKWLQRIRENVHATGDTQVHEELLEGH 1551

Query: 390  LSIVKELVCFLNSEKKMEFGVTNGLIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVC 449
            L + KEL+ FL ++ K +    N LI +LI+D+LF  S+  L L + G +  + + P VC
Sbjct: 1552 LCLAKELMFFLGADSKAQL---NELIHELIDDFLFTASREFLHLRRHGSLRQDTVPPPVC 1608

Query: 450  QSPESISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCAEPLTEWDYLPPIGPKPPKGF 509
            +SP +I+A   LLI LC   VPN+KLL   L D    D  +PL EWDYLPP+G +P KGF
Sbjct: 1609 RSPHTIAAACDLLIALCQLCVPNMKLLTNTLIDFVCTD-TDPLREWDYLPPVGARPTKGF 1667

Required for eye and embryo development, and plays a role in compound eye assembly and oogenesis respectively. In the larval eye disks, cells outside the assembling facets require this protein for short-range cell interactions that prevent the mystery cells from becoming photoreceptors. It is also required for nuclear migration and cellularization in early embryogenesis and could play a role in pole cell determination, development or function.

Drosophila melanogaster (taxid: 7227)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: 1

EC: 2

>sp|Q9UPU5|UBP24_HUMAN Ubiquitin carboxyl-terminal hydrolase 24 OS=Homo sapiens GN=USP24 PE=1 SV=3

 Score = 83.2 bits (204), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 139/302 (46%), Gaps = 31/302 (10%)

Query: 225  DILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLLLCDEKIIRACVQEQL- 283
            D L+  EAL LL  C  L +  L +    P     A F+ D LL      IR    +QL 
Sbjct: 1403 DSLIAGEALSLLVTCLQLRSQQLASFYNLP---CVADFIIDILLGSPSAEIRRVACDQLY 1459

Query: 284  TLSVTLSYAY--ASNAEQACLVAFLQLLFPLLT----SDALETRVYTKSAEYFQLFCRTL 337
            TLS T + A+       Q  L   L    PL +       +  R+ ++  EYF L C+ L
Sbjct: 1460 TLSQTDTSAHPDVQKPNQFLLGVILTAQLPLWSPTSIMRGVNQRLLSQCMEYFDLRCQLL 1519

Query: 338  NFVSSSVWIGAGSVLSTGIDVEKYLTQELAVLKRL----SVGAKKSGQRDILLQGHLSIV 393
            + +++S       +    I     L  E+  L       +   + S   +ILL GHL ++
Sbjct: 1520 DDLTTS------EMEQLRISPATMLEDEITWLDNFEPNRTAECETSEADNILLAGHLRLI 1573

Query: 394  KELVCFLNSEKKMEFGVTNGLIRDLINDYLFPTSKLMLKLEK---TGEISFNEIAPAVCQ 450
            K L+    +EK+M   + + LI+ L++D+LF  S+++L       +  IS  +  P  C 
Sbjct: 1574 KTLLSLCGAEKEM---LGSSLIKPLLDDFLFRASRIILNSHSPAGSAAISQQDFHPK-CS 1629

Query: 451  SPESISAGFSLLIGLCTGSVPNLKLLVAMLTDMFY-PDCAEPLT-EWDYLPPIGPKPPKG 508
            +  S  A + +L+ L   S  NL++++  L  M + PD A  LT E+DYLPP+  +   G
Sbjct: 1630 TANSRLAAYEVLVMLADSSPSNLQIIIKELLSMHHQPDPA--LTKEFDYLPPVDSRSSSG 1687

Query: 509  FV 510
            FV
Sbjct: 1688 FV 1689

Involved in the ubiquitin-dependent proteolytic pathway in conjunction with the 26S proteasome.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: 1

EC: 2

>sp|B1AY13|UBP24_MOUSE Ubiquitin carboxyl-terminal hydrolase 24 OS=Mus musculus GN=Usp24 PE=1 SV=1

 Score = 80.5 bits (197), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 166/380 (43%), Gaps = 53/380 (13%)

Query: 164  TVLSLIKIIWAASRGDFEMKAAPVEVFTRRTNEMF-----------------ALDGEENS 206
            TV   +++ WAA+ G  ++  +   +  + +N +F                 + +GE  +
Sbjct: 1327 TVACFMRLSWAAAAGRLDLVGSSQPI--KESNSLFPAGIRSRLSSSGSNCSSSSEGEPAA 1384

Query: 207  SAPGGDNAQGDTKDIDLDDILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDT 266
               G    Q   + +   D L+  EAL LL  C  L +  L +    P     A F+ D 
Sbjct: 1385 LHAGICVRQ---QSVSTKDALIAGEALSLLVTCLQLRSQQLASFYSLP---CVADFIIDI 1438

Query: 267  LLLCDEKIIRACVQEQL-TLSVTLSYAY--ASNAEQACLVAFLQLLFPLLT----SDALE 319
            LL      IR    +QL TLS T + A+       Q  L   L    PL +       + 
Sbjct: 1439 LLGSPSAEIRRVACDQLYTLSQTDTSAHPEVQKPNQFLLGVILTAQLPLWSPTSIMRGVN 1498

Query: 320  TRVYTKSAEYFQLFCRTLNFVSSSVWIGAGSVLSTGIDVEKYLTQELAVLKRL----SVG 375
             R+ ++  EYF L C+ L+ +++S       +    I     L  E+  L       +  
Sbjct: 1499 QRLLSQCMEYFDLRCQLLDDLTTS------EMDQLRISPATMLEDEITWLDNFEPNRTAD 1552

Query: 376  AKKSGQRDILLQGHLSIVKELVCFLNSEKKMEFGVTNGLIRDLINDYLFPTSKLMLKLEK 435
             + S   +ILL GHL ++K L+    +EK+M   + + LI+ L++D+LF  S++++    
Sbjct: 1553 CETSEADNILLAGHLRLIKTLLSLCGAEKEM---LGSSLIKPLLDDFLFRASRIIVNSHS 1609

Query: 436  ---TGEISFNEIAPAVCQSPESISAGFSLLIGLCTGSVPNLKLLVAMLTDMFY-PDCAEP 491
               +  IS  +  P  C +  S  A + +L+ L   S  NL+++   L  M + PD A  
Sbjct: 1610 PASSAAISQQDFHPK-CSTVNSRLAAYEVLVMLADSSPSNLQIITKELLSMHHQPDPA-- 1666

Query: 492  LT-EWDYLPPIGPKPPKGFV 510
            LT E+DYLPP+  +   GFV
Sbjct: 1667 LTKEFDYLPPVDSRSSSGFV 1686

Involved in the ubiquitin-dependent proteolytic pathway in conjunction with the 26S proteasome.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: 1

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	517
332030161	2590	Putative ubiquitin carboxyl-terminal hyd	0.609	0.121	0.413	2e-59
380024961	2588	PREDICTED: LOW QUALITY PROTEIN: probable	0.611	0.122	0.405	3e-59
328781722	2588	PREDICTED: probable ubiquitin carboxyl-t	0.611	0.122	0.402	5e-59
340713827	2588	PREDICTED: probable ubiquitin carboxyl-t	0.611	0.122	0.399	1e-58
350409594	2588	PREDICTED: probable ubiquitin carboxyl-t	0.611	0.122	0.399	1e-58
307186143	2606	Probable ubiquitin carboxyl-terminal hyd	0.609	0.120	0.407	3e-58
307205765	2565	Probable ubiquitin carboxyl-terminal hyd	0.609	0.122	0.402	1e-57
383863681	2585	PREDICTED: probable ubiquitin carboxyl-t	0.680	0.136	0.371	6e-57
345479954	2606	PREDICTED: probable ubiquitin carboxyl-t	0.649	0.128	0.379	1e-53
345479950	2568	PREDICTED: probable ubiquitin carboxyl-t	0.649	0.130	0.379	1e-53

>gi|332030161|gb|EGI69955.1| Putative ubiquitin carboxyl-terminal hydrolase FAF-X [Acromyrmex echinatior]

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 148/358 (41%), Positives = 208/358 (58%), Gaps = 43/358 (12%)

Query: 160  PNLDTVLSLIKIIWAASRGDFEMKAAPVEVFTRRTNEMFALDGEENSSAPGGDNAQGDTK 219
            P++ T+ ++I++ WAAS G+     A        +NE+     E N         Q + +
Sbjct: 1264 PDVATIRAIIRLAWAASTGNLNNINA--------SNEVLHSMHETN---------QKEQR 1306

Query: 220  DIDLDDILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLLLCDEKIIRACV 279
            + D +D+LVCKEALE+LT+  +LN S L+ L    +++++  FL D +LL   + IR   
Sbjct: 1307 NPDNNDVLVCKEALEVLTIALVLNPSALETL---SRDKIWHTFLIDLVLLSTSRAIRIAA 1363

Query: 280  QEQLTLSVTLSYAYASNAEQACLVAFLQLLFPLLTSDALETRVYTKSAEYFQLFCRTLNF 339
             EQ  L  T    + S   Q  LV  + LLF +L S  +E     +S EYFQL CR LNF
Sbjct: 1364 GEQFFLIST----WCSGGHQTLLVT-VTLLFTVLNSTVMENA--KQSHEYFQLLCRLLNF 1416

Query: 340  VSSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKSGQRDI---LLQGHLSIVKEL 396
               S     G  L+T    E  L  E+A LK++    K++G+  +   LL+GHL + KEL
Sbjct: 1417 AHMS-----GCPLTTA---ETLLNVEIAWLKKVRDNVKETGESQVDEALLEGHLGLTKEL 1468

Query: 397  VCFLNSEKKMEFGVTN----GLIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVCQSP 452
            + FL S +K E G        LI++L+ D++FP S+LML+L  TGE+S ++  P VC +P
Sbjct: 1469 LAFLPSNQKYEIGSDEKHGVNLIKELVEDFVFPASRLMLQLRSTGELSASQACP-VCTTP 1527

Query: 453  ESISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCAEPLTEWDYLPPIGPKPPKGFV 510
            +S SA F LL+GLC G VPN+KLLV MLTDMFY +  EPL EWDYLPP+G +P KGFV
Sbjct: 1528 QSTSAAFDLLVGLCIGCVPNMKLLVTMLTDMFYSEKDEPLVEWDYLPPVGLRPLKGFV 1585

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380024961|ref|XP_003696253.1| PREDICTED: LOW QUALITY PROTEIN: probable ubiquitin carboxyl-terminal hydrolase FAF-X-like [Apis florea]

 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 145/358 (40%), Positives = 212/358 (59%), Gaps = 42/358 (11%)

Query: 160  PNLDTVLSLIKIIWAASRGDFEMKAAPVEVFTRRTNEMFALDGEENSSAPGGDNAQGDTK 219
            P++ T+ ++I++ WAAS G+     A  E+     + +  ++ +E S+ P          
Sbjct: 1263 PDVATIRAIIRLAWAASTGNLNNINASAEML----HTLHEINEKETSNNP---------- 1308

Query: 220  DIDLDDILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLLLCDEKIIRACV 279
              D +D+LVCKEALE+LT+  +LN + L++L    +++++  FL D +LL   +++R   
Sbjct: 1309 --DNNDVLVCKEALEVLTIALVLNPTALESL---SRDKMWHTFLIDLVLLSTSRVVRMAA 1363

Query: 280  QEQLTLSVTLSYAYASNAEQACLVAFLQLLFPLLTSDALETRVYTKSAEYFQLFCRTLNF 339
             EQ  L  T    + S+  Q  L A + LLF +L +  +E     +S EYFQL CR LNF
Sbjct: 1364 AEQFFLIST----WYSSGHQPLLFA-ITLLFTVLNTTVMEHA--KQSHEYFQLLCRLLNF 1416

Query: 340  VSSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKSGQRDI---LLQGHLSIVKEL 396
               S     G  L T    E  L  E+A LK++    K++G+  I   +L+GHLS+ KEL
Sbjct: 1417 AHMS-----GCPLLTA---ETLLNIEIAWLKKVRDNVKETGESQIDEAVLEGHLSLTKEL 1468

Query: 397  VCFLNSEKKMEFGVTN----GLIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVCQSP 452
            + FL   KK E G        LI++L+ D++FP S+LML+L  TGE+S ++ +P VC +P
Sbjct: 1469 LSFLPPSKKYELGSDEKHGVNLIKELVEDFVFPASRLMLQLRSTGELSASQASP-VCTTP 1527

Query: 453  ESISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCAEPLTEWDYLPPIGPKPPKGFV 510
            +S SA F LL+GLC G VPN+KLLV MLTDMFY +  EPL EWDYLPP+G +P KGFV
Sbjct: 1528 QSTSAAFDLLVGLCVGCVPNMKLLVTMLTDMFYSERDEPLVEWDYLPPVGLRPLKGFV 1585

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328781722|ref|XP_395447.4| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X [Apis mellifera]

 Score =  234 bits (598), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 144/358 (40%), Positives = 212/358 (59%), Gaps = 42/358 (11%)

Query: 160  PNLDTVLSLIKIIWAASRGDFEMKAAPVEVFTRRTNEMFALDGEENSSAPGGDNAQGDTK 219
            P++ T+ ++I++ WAAS G+     A  E+     + +  ++ +E S+ P          
Sbjct: 1263 PDVATIRAIIRLAWAASTGNLNNINASAEML----HTLHEINEKETSNNP---------- 1308

Query: 220  DIDLDDILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLLLCDEKIIRACV 279
              D +D+LVCKEALE+LT+  +LN + L++L    +++++  FL D +LL   +++R   
Sbjct: 1309 --DNNDVLVCKEALEVLTIALVLNPTALESL---SRDKMWHTFLIDLVLLSTSRVVRMAA 1363

Query: 280  QEQLTLSVTLSYAYASNAEQACLVAFLQLLFPLLTSDALETRVYTKSAEYFQLFCRTLNF 339
             EQ  L  T    + S+  Q  L A + LLF +L +  +E     +S EYFQL CR LNF
Sbjct: 1364 AEQFFLIST----WYSSGHQPLLFA-ITLLFTVLNTTVMEHA--KQSHEYFQLLCRLLNF 1416

Query: 340  VSSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKSGQRDI---LLQGHLSIVKEL 396
               S     G  L T    E  L  E+A LK++    K++G+  +   +L+GHLS+ KEL
Sbjct: 1417 AHMS-----GCPLLTA---ETLLNIEIAWLKKVRDNVKETGESQVDEAVLEGHLSLTKEL 1468

Query: 397  VCFLNSEKKMEFGVTN----GLIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVCQSP 452
            + FL   KK E G        LI++L+ D++FP S+LML+L  TGE+S ++ +P VC +P
Sbjct: 1469 LSFLPPSKKYELGSDEKHGVNLIKELVEDFVFPASRLMLQLRSTGELSASQASP-VCTTP 1527

Query: 453  ESISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCAEPLTEWDYLPPIGPKPPKGFV 510
            +S SA F LL+GLC G VPN+KLLV MLTDMFY +  EPL EWDYLPP+G +P KGFV
Sbjct: 1528 QSTSAAFDLLVGLCVGCVPNMKLLVTMLTDMFYSERDEPLVEWDYLPPVGLRPLKGFV 1585

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340713827|ref|XP_003395437.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X-like isoform 1 [Bombus terrestris] gi|340713829|ref|XP_003395438.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X-like isoform 2 [Bombus terrestris]

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 143/358 (39%), Positives = 210/358 (58%), Gaps = 42/358 (11%)

Query: 160  PNLDTVLSLIKIIWAASRGDFEMKAAPVEVFTRRTNEMFALDGEENSSAPGGDNAQGDTK 219
            P++ T+ ++I++ WAAS G+     A  E+     + +  ++ +E S+ P          
Sbjct: 1263 PDVATIRAIIRLAWAASTGNLNNINASAEML----HTLHEINEKETSNNP---------- 1308

Query: 220  DIDLDDILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLLLCDEKIIRACV 279
              D +D+LVCKEALE+LT+  +LN + L++L    +++++  FL D +LL   +++R   
Sbjct: 1309 --DNNDVLVCKEALEVLTIALVLNPTALESL---SRDKMWHTFLIDLVLLSTSRVVRMAA 1363

Query: 280  QEQLTLSVTLSYAYASNAEQACLVAFLQLLFPLLTSDALETRVYTKSAEYFQLFCRTLNF 339
             EQ  L  T    + S+  Q  L A + LLF +L +  +E     +S EYFQL CR LNF
Sbjct: 1364 AEQFFLIST----WYSSGHQPLLFA-ITLLFTVLNTTVMEHA--KQSHEYFQLLCRLLNF 1416

Query: 340  VSSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKSGQRDI---LLQGHLSIVKEL 396
               S     G  L T    E  L  E+A LK++    K++G+  +   +L+GHL + KEL
Sbjct: 1417 AHMS-----GCPLLTA---ETLLNIEIAWLKKVRDNVKETGESQVDEAVLEGHLGLTKEL 1468

Query: 397  VCFLNSEKKMEFGVTN----GLIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVCQSP 452
            + FL   KK E G        LI++L+ D++FP S+LML+L  TGE+S  + +P VC +P
Sbjct: 1469 LAFLPPSKKFELGSDEKHGVNLIKELVEDFVFPASRLMLQLRSTGELSATQASP-VCTTP 1527

Query: 453  ESISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCAEPLTEWDYLPPIGPKPPKGFV 510
            +S SA F LL+GLC G VPN+KLLV MLTDMFY +  EPL EWDYLPP+G +P KGFV
Sbjct: 1528 QSTSAAFDLLVGLCVGCVPNMKLLVTMLTDMFYSERDEPLVEWDYLPPVGLRPLKGFV 1585

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350409594|ref|XP_003488787.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X-like [Bombus impatiens]

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 143/358 (39%), Positives = 211/358 (58%), Gaps = 42/358 (11%)

Query: 160  PNLDTVLSLIKIIWAASRGDFEMKAAPVEVFTRRTNEMFALDGEENSSAPGGDNAQGDTK 219
            P++ T+ ++I++ WAAS G+     A  E+     + +  ++ +E S+ P          
Sbjct: 1263 PDVATIRAIIRLAWAASTGNLNNINASAEML----HTLHEINEKETSNNP---------- 1308

Query: 220  DIDLDDILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLLLCDEKIIRACV 279
              D +D+LVCKEALE+LT+  +LN + L++L    +++++  FL D +LL   +++R   
Sbjct: 1309 --DNNDVLVCKEALEVLTIALVLNPTALESL---SRDKMWHTFLIDLVLLSTSRVVRMAA 1363

Query: 280  QEQLTLSVTLSYAYASNAEQACLVAFLQLLFPLLTSDALETRVYTKSAEYFQLFCRTLNF 339
             EQ  L  T    + S+  Q  L A + LLF +L +  +E     +S EYFQL CR LNF
Sbjct: 1364 AEQFFLIST----WYSSGHQPLLFA-ITLLFTVLNTTVMEHA--KQSHEYFQLLCRLLNF 1416

Query: 340  VSSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKSGQRDI---LLQGHLSIVKEL 396
               S     G  L T    E  L  E+A LK++    K++G+  +   +L+GHL + KEL
Sbjct: 1417 AHMS-----GCPLLTA---ETLLNIEIAWLKKVRDNVKETGESQVDEAVLEGHLGLTKEL 1468

Query: 397  VCFLNSEKKMEFGVTN----GLIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVCQSP 452
            + FL   KK E G        LI++L+ D++FP S+LML+L  TGE+S ++ +P VC +P
Sbjct: 1469 LAFLPPSKKFELGSDEKHGVNLIKELVEDFVFPASRLMLQLRSTGELSASQASP-VCTTP 1527

Query: 453  ESISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCAEPLTEWDYLPPIGPKPPKGFV 510
            +S SA F LL+GLC G VPN+KLLV MLTDMFY +  EPL EWDYLPP+G +P KGFV
Sbjct: 1528 QSTSAAFDLLVGLCVGCVPNMKLLVTMLTDMFYSERDEPLVEWDYLPPVGLRPLKGFV 1585

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307186143|gb|EFN71868.1| Probable ubiquitin carboxyl-terminal hydrolase FAF-X [Camponotus floridanus]

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 146/358 (40%), Positives = 206/358 (57%), Gaps = 43/358 (12%)

Query: 160  PNLDTVLSLIKIIWAASRGDFEMKAAPVEVFTRRTNEMFALDGEENSSAPGGDNAQGDTK 219
            P++ T+ ++I++ WAAS G+     A        +NE+     E N         Q + +
Sbjct: 1266 PDVATIRAIIRLAWAASTGNLNNINA--------SNEILHSTHEIN---------QKEQR 1308

Query: 220  DIDLDDILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLLLCDEKIIRACV 279
            + D +D+LVCKEALE+LT+  +LN S L+ L    +++++  FL D +LL   + IR   
Sbjct: 1309 NPDNNDVLVCKEALEVLTIALVLNPSALETL---SRDKIWHTFLIDLVLLSTSRAIRIAA 1365

Query: 280  QEQLTLSVTLSYAYASNAEQACLVAFLQLLFPLLTSDALETRVYTKSAEYFQLFCRTLNF 339
             EQ  L  T    + S   Q  LV  + LLF +L +   E     +S EYFQL CR LNF
Sbjct: 1366 GEQFFLIST----WCSGGHQTLLVT-ITLLFAVLNTIVTENA--KQSHEYFQLLCRLLNF 1418

Query: 340  VSSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKSGQRDI---LLQGHLSIVKEL 396
               S     G  L+T    E  L  E+A LK++    K++G+  +   LL+GHL + KEL
Sbjct: 1419 THMS-----GCSLATA---ETLLNVEIAWLKKVRDNMKETGETQVDEALLEGHLGLTKEL 1470

Query: 397  VCFLNSEKKMEFGVTN----GLIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVCQSP 452
            + FL   +K E G        LI++L+ D++FP S+LML+L  TGE+S ++  P VC +P
Sbjct: 1471 LAFLPPHQKYEIGSDEKHGINLIKELVEDFVFPASRLMLQLRSTGELSPSQACP-VCSTP 1529

Query: 453  ESISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCAEPLTEWDYLPPIGPKPPKGFV 510
            +S SA F LL+GLC G VPN+KLLV MLTDMFY +  EPL EWDYLPP+G +P KGFV
Sbjct: 1530 QSTSAAFDLLVGLCVGCVPNMKLLVTMLTDMFYSEKDEPLAEWDYLPPVGHRPLKGFV 1587

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307205765|gb|EFN83995.1| Probable ubiquitin carboxyl-terminal hydrolase FAF-X [Harpegnathos saltator]

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 144/358 (40%), Positives = 206/358 (57%), Gaps = 43/358 (12%)

Query: 160  PNLDTVLSLIKIIWAASRGDFEMKAAPVEVFTRRTNEMFALDGEENSSAPGGDNAQGDTK 219
            P++ T+ ++I++ WAAS G+     A  E          AL     ++       Q + +
Sbjct: 1237 PDVATIRAIIRLAWAASTGNLNNINASTE----------ALHSMHETN-------QKEQR 1279

Query: 220  DIDLDDILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLLLCDEKIIRACV 279
            + D +D+LVCKEALE+LT+  +LN + L+ L    +E+++  FL D +LL   + IR   
Sbjct: 1280 NPDNNDVLVCKEALEVLTITLVLNPTALETL---SREKIWHTFLIDLVLLSTSRAIRLAA 1336

Query: 280  QEQLTLSVTLSYAYASNAEQACLVAFLQLLFPLLTSDALETRVYTKSAEYFQLFCRTLNF 339
             EQ  L  T    + S+  Q  LV  + LLF +L +  +E     +S EYFQL CR LNF
Sbjct: 1337 AEQFYLIST----WCSSGHQPLLVT-ITLLFTVLNTTVMENA--KQSHEYFQLLCRLLNF 1389

Query: 340  VSSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKSGQRDI---LLQGHLSIVKEL 396
               S        L+T    E  L  E+A LKR+    K++G+  +   +L+GHL + KEL
Sbjct: 1390 AHIST-----CPLTTA---ETLLNVEIAWLKRVRDNVKETGESQVDEAVLEGHLGLTKEL 1441

Query: 397  VCFLNSEKKMEFGVTN----GLIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVCQSP 452
            + FL   +K E G        LI++L+ D++FP S+LML+L  TGE+S ++  P VC +P
Sbjct: 1442 LAFLPPSQKYELGSDEKHGVNLIKELVEDFVFPASRLMLQLRSTGELSASQACP-VCTTP 1500

Query: 453  ESISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCAEPLTEWDYLPPIGPKPPKGFV 510
            +S SA F LL+GLC G VPN+KLLV MLTDMFY +  EPL EWDYLPP+G +P KGFV
Sbjct: 1501 QSTSAAFDLLVGLCVGCVPNMKLLVTMLTDMFYSEKDEPLVEWDYLPPVGLRPLKGFV 1558

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383863681|ref|XP_003707308.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X [Megachile rotundata]

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 150/404 (37%), Positives = 221/404 (54%), Gaps = 52/404 (12%)

Query: 124  PNVNTAPTSPNITTG-------PNIATSSPSDITTHSLVLSIS---PNLDTVLSLIKIIW 173
            PN NT  T  N+            +   + SD      + ++S   PN+ T+ ++I++ W
Sbjct: 1218 PNQNTEFTLRNVAAKLAQHLARQMLCVGTESDKCRQLFMQALSWELPNVATIRAIIRLAW 1277

Query: 174  AASRGDFEMKAAPVEVFTRRTNEMFALDGEENSSAPGGDNAQGDTKDIDLDDILVCKEAL 233
            AAS G+     A  E+     + +     +E S+ P            D +D+LVCKEAL
Sbjct: 1278 AASTGNLNNINASAEML----HTLHETKEKETSNNP------------DNNDVLVCKEAL 1321

Query: 234  ELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLLLCDEKIIRACVQEQLTLSVTLSYAY 293
            E+LT+  +LN + L++L    ++  +  FL D +LL   +++R    EQ     T    +
Sbjct: 1322 EILTIALVLNPTALESL---SRDNTWHTFLIDLVLLSTSRVVRMAAAEQFFFIST----W 1374

Query: 294  ASNAEQACLVAFLQLLFPLLTSDALETRVYTKSAEYFQLFCRTLNFVSSSVWIGAGSVLS 353
             S+  Q  L A + LLF +L +  +E     +S EYFQL CR LN+   S     G  L 
Sbjct: 1375 YSSGHQPLLFA-ITLLFNVLNTTVMEHA--KQSHEYFQLLCRLLNYAHMS-----GCPLL 1426

Query: 354  TGIDVEKYLTQELAVLKRLSVGAKKSGQRDI---LLQGHLSIVKELVCFLNSEKKMEFGV 410
            T    +  L  E+A LK++    K++G+  +   +L+GHL + KEL+ FL   KK E G 
Sbjct: 1427 TA---DSLLNIEIAWLKKVRDNVKETGESQVDEAVLEGHLGLTKELLAFLPPSKKYELGS 1483

Query: 411  TN----GLIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVCQSPESISAGFSLLIGLC 466
                   LI++L+ D++FP S+LML+L  TGE+S ++ +P VC +P+S SA F LL+GLC
Sbjct: 1484 DEKHGANLIKELVEDFVFPASRLMLQLRSTGELSASQASP-VCTTPQSTSAAFDLLVGLC 1542

Query: 467  TGSVPNLKLLVAMLTDMFYPDCAEPLTEWDYLPPIGPKPPKGFV 510
             G VPN+KLLV MLTDMFY +  EPL EWDYLPP+G +P KGFV
Sbjct: 1543 VGCVPNMKLLVTMLTDMFYSERDEPLVEWDYLPPVGLRPLKGFV 1586

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345479954|ref|XP_001604458.2| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X-like isoform 1 [Nasonia vitripennis]

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 147/387 (37%), Positives = 211/387 (54%), Gaps = 51/387 (13%)

Query: 141  IATSSPSDITTHSLVLSIS---PNLDTVLSLIKIIWAASRGDFEMKAAPVEVFTRRTNEM 197
            ++ S+  D     LV ++S   P++ T+ ++I++ WAAS G      A  +V     +EM
Sbjct: 1248 LSGSTELDRCRQLLVQALSWELPDVATIRAIIRLAWAASSGSLNHVNASAQVL----HEM 1303

Query: 198  FALDGEENSSAPGGDNAQGDTKDIDLDDILVCKEALELLTVCFLLNNSLLKALLKEPKER 257
               +  E              +++D +D+LVCKEALE+LT+  +LN   L+ L K+    
Sbjct: 1304 HETNAREQ-------------RNLDNNDVLVCKEALEVLTIALVLNPKALEDLTKDSMRH 1350

Query: 258  ------LFAHFLCDTLLLCDEKIIRACVQEQLTLSVTLSYAYASNAEQACLVAFLQLLFP 311
                  ++  FL D +L+   + IRA   EQ  L  T    + S+  QA L  F+  LFP
Sbjct: 1351 NAAENVMWNTFLIDLVLVSTSRAIRATAAEQFLLIST----WCSSGHQA-LQFFITRLFP 1405

Query: 312  LLTSDALETRVYTK-SAEYFQLFCRTLNFVSSSVWIGAGSVLSTGIDVEKYLTQELAVLK 370
            ++ +  +E   Y K S E+FQL CR LN+   S     G  LS+    E +L  E+  LK
Sbjct: 1406 VINTTVME---YAKQSHEFFQLLCRLLNYAHIS-----GCPLSSA---ENWLNIEIVWLK 1454

Query: 371  --RLSVGAKKSGQRD-ILLQGHLSIVKELVCFLNSEKKMEFGVTN----GLIRDLINDYL 423
              R  V     GQ D  +L+GHL + KEL+ FL   KK E G        LI++L+ D++
Sbjct: 1455 EVRDRVQEFGDGQMDEAVLEGHLCLTKELLSFLPPSKKYELGSDEKRGINLIKELVQDFI 1514

Query: 424  FPTSKLMLKLEKTGEISFNEIAPAVCQSPESISAGFSLLIGLCTGSVPNLKLLVAMLTDM 483
            FP S  ML+L  TGE+  ++ + AVC +P+S SA F LL+ LCTG VPN+KLLV ML +M
Sbjct: 1515 FPASCYMLQLRNTGELGSSQ-SYAVCTTPQSTSAAFDLLVSLCTGCVPNMKLLVTMLCEM 1573

Query: 484  FYPDCAEPLTEWDYLPPIGPKPPKGFV 510
            FY +  EPL EWDYLP +G +PP GFV
Sbjct: 1574 FYSEKDEPLVEWDYLPSVGSRPPMGFV 1600

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345479950|ref|XP_003424062.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X-like isoform 2 [Nasonia vitripennis] gi|345479952|ref|XP_003424063.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X-like isoform 3 [Nasonia vitripennis]

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 147/387 (37%), Positives = 211/387 (54%), Gaps = 51/387 (13%)

Query: 141  IATSSPSDITTHSLVLSIS---PNLDTVLSLIKIIWAASRGDFEMKAAPVEVFTRRTNEM 197
            ++ S+  D     LV ++S   P++ T+ ++I++ WAAS G      A  +V     +EM
Sbjct: 1248 LSGSTELDRCRQLLVQALSWELPDVATIRAIIRLAWAASSGSLNHVNASAQVL----HEM 1303

Query: 198  FALDGEENSSAPGGDNAQGDTKDIDLDDILVCKEALELLTVCFLLNNSLLKALLKEPKER 257
               +  E              +++D +D+LVCKEALE+LT+  +LN   L+ L K+    
Sbjct: 1304 HETNAREQ-------------RNLDNNDVLVCKEALEVLTIALVLNPKALEDLTKDSMRH 1350

Query: 258  ------LFAHFLCDTLLLCDEKIIRACVQEQLTLSVTLSYAYASNAEQACLVAFLQLLFP 311
                  ++  FL D +L+   + IRA   EQ  L  T    + S+  QA L  F+  LFP
Sbjct: 1351 NAAENVMWNTFLIDLVLVSTSRAIRATAAEQFLLIST----WCSSGHQA-LQFFITRLFP 1405

Query: 312  LLTSDALETRVYTK-SAEYFQLFCRTLNFVSSSVWIGAGSVLSTGIDVEKYLTQELAVLK 370
            ++ +  +E   Y K S E+FQL CR LN+   S     G  LS+    E +L  E+  LK
Sbjct: 1406 VINTTVME---YAKQSHEFFQLLCRLLNYAHIS-----GCPLSSA---ENWLNIEIVWLK 1454

Query: 371  --RLSVGAKKSGQRD-ILLQGHLSIVKELVCFLNSEKKMEFGVTN----GLIRDLINDYL 423
              R  V     GQ D  +L+GHL + KEL+ FL   KK E G        LI++L+ D++
Sbjct: 1455 EVRDRVQEFGDGQMDEAVLEGHLCLTKELLSFLPPSKKYELGSDEKRGINLIKELVQDFI 1514

Query: 424  FPTSKLMLKLEKTGEISFNEIAPAVCQSPESISAGFSLLIGLCTGSVPNLKLLVAMLTDM 483
            FP S  ML+L  TGE+  ++ + AVC +P+S SA F LL+ LCTG VPN+KLLV ML +M
Sbjct: 1515 FPASCYMLQLRNTGELGSSQ-SYAVCTTPQSTSAAFDLLVSLCTGCVPNMKLLVTMLCEM 1573

Query: 484  FYPDCAEPLTEWDYLPPIGPKPPKGFV 510
            FY +  EPL EWDYLP +G +PP GFV
Sbjct: 1574 FYSEKDEPLVEWDYLPSVGSRPPMGFV 1600

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	517
UNIPROTKB|E1C806	2556	USP9X "Ubiquitin carboxyl-term	0.528	0.106	0.365	4.6e-43
UNIPROTKB|O00507	2555	USP9Y "Probable ubiquitin carb	0.539	0.109	0.365	1.3e-42
UNIPROTKB|I3LHI4	915	I3LHI4 "Ubiquitin carboxyl-ter	0.528	0.298	0.365	5.5e-41
UNIPROTKB|Q93008	2570	USP9X "Probable ubiquitin carb	0.528	0.106	0.368	3.2e-40
UNIPROTKB|F1RX17	1812	LOC100517440 "Ubiquitin carbox	0.528	0.150	0.365	6.8e-40
UNIPROTKB|E2RBU9	1677	USP9X "Uncharacterized protein	0.528	0.162	0.365	1.1e-39
UNIPROTKB|G5E630	2554	LOC790347 "Ubiquitin carboxyl-	0.528	0.106	0.365	2.8e-39
UNIPROTKB|E1BWJ4	2553	USP9X "Ubiquitin carboxyl-term	0.528	0.106	0.365	4.5e-39
UNIPROTKB|E1BWJ5	2552	USP9X "Ubiquitin carboxyl-term	0.528	0.106	0.365	5.7e-39
RGD|1560056	2558	Usp9x "ubiquitin specific pept	0.528	0.106	0.361	5.8e-39

UNIPROTKB|E1C806 USP9X "Ubiquitin carboxyl-terminal hydrolase" [Gallus gallus (taxid:9031)]

 Score = 425 (154.7 bits), Expect = 4.6e-43, Sum P(2) = 4.6e-43
 Identities = 111/304 (36%), Positives = 157/304 (51%)

Query:   222 DLDDILVCKEALELLTVCFXXXXXXXXXXXXEPKERLFAHFLCDTLLLCDEKIIRACVQE 281
             D++D  VC EALE++T+CF              KE+ +  F+ D LL C  KI+R   QE
Sbjct:  1282 DMEDEQVCCEALEVMTLCFALIPTALDALS---KEKAWQTFIIDLLLHCHSKIVRQMAQE 1338

Query:   282 QLTLSVTLSYAYASNAEQACXXXXXXXXXXXXTSDALETRVYTKSAEYFQLFCRTLNFV- 340
             Q  L  T          Q               S A E   +  S +YF L    LN+  
Sbjct:  1339 QFFLMATRCCM-----GQRPLLFFITLLFTVLGSTARERAKH--SGDYFTLLRHLLNYAY 1391

Query:   341 SSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKSGQRDI---LLQGHLSIVKELV 397
             +S++ +    VL         L  E+  LKR+    K++G+  +   +L+GHL + KEL+
Sbjct:  1392 NSNINVPNAEVL---------LNNEIDWLKRIRDEVKRTGETGVEETILEGHLGVTKELL 1442

Query:   398 CFLNSEKKMEFGVTNG---LIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVCQSPES 454
              F   EKK   G   G   LI++LI+D++FP S + L+  + GE+   +  P VC SP +
Sbjct:  1443 AFQTPEKKYHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIP-VCSSPAT 1501

Query:   455 ISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCA----EPLTEWDYLPPIGPKPPKGFV 510
             I+AGF LL+ L  G V NLK +V  LT+M+Y   A    E LTEW+YLPP+GP+PPKGFV
Sbjct:  1502 INAGFELLVALAVGCVRNLKQIVDTLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKGFV 1561

Query:   511 WPKS 514
               K+
Sbjct:  1562 GLKN 1565

GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0008234 "cysteine-type peptidase activity" evidence=IEA

UNIPROTKB|O00507 USP9Y "Probable ubiquitin carboxyl-terminal hydrolase FAF-Y" [Homo sapiens (taxid:9606)]

 Score = 432 (157.1 bits), Expect = 1.3e-42, Sum P(3) = 1.3e-42
 Identities = 113/309 (36%), Positives = 160/309 (51%)

Query:   216 GDTKDIDLDDILVCKEALELLTVCFXXXXXXXXXXXXEPKERLFAHFLCDTLLLCDEKII 275
             G  K ++++D  VC EALE++T+CF              KE+ +  F+ D LL C  K +
Sbjct:  1275 GSNK-LEVEDEQVCCEALEVMTLCFALLPTALDALS---KEKAWQTFIIDLLLHCPSKTV 1330

Query:   276 RACVQEQLTLSVTLSYAYASNAEQACXXXXXXXXXXXXTSDALETRVYTKSAEYFQLFCR 335
             R   QEQ  L  T                         T  A E   Y  S +YF L   
Sbjct:  1331 RQLAQEQFFLMCTRC---CMGHRPLLFFITLLFTILGST--AREKGKY--SGDYFTLLRH 1383

Query:   336 TLNFVSSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKSGQRDI---LLQGHLSI 392
              LN+  +      G++     +V   L  E+  LKR+    K +G+  +   +L+GHL +
Sbjct:  1384 LLNYAYN------GNINIPNAEV--LLVSEIDWLKRIRDNVKNTGETGVEEPILEGHLGV 1435

Query:   393 VKELVCFLNSEKKMEFGVTNG---LIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVC 449
              KEL+ F  SEKK  FG   G   LI++LI+D++FP SK+ L+  ++GE+   +  P VC
Sbjct:  1436 TKELLAFQTSEKKYHFGCEKGGANLIKELIDDFIFPASKVYLQYLRSGELPAEQAIP-VC 1494

Query:   450 QSPESISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCA----EPLTEWDYLPPIGPKP 505
              SP +I+AGF LL+ L  G V NLK +V  LT+M+Y   A    E LTEW+YLPP+GP+P
Sbjct:  1495 SSPVTINAGFELLVALAIGCVRNLKQIVDCLTEMYYMGTAITTCEALTEWEYLPPVGPRP 1554

Query:   506 PKGFVWPKS 514
             PKGFV  K+
Sbjct:  1555 PKGFVGLKN 1563

GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISS

GO:0016579 "protein deubiquitination" evidence=ISS

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=ISS

GO:0030509 "BMP signaling pathway" evidence=ISS

GO:0007283 "spermatogenesis" evidence=TAS

GO:0008234 "cysteine-type peptidase activity" evidence=TAS

GO:0004843 "ubiquitin-specific protease activity" evidence=TAS

GO:0070410 "co-SMAD binding" evidence=ISS

UNIPROTKB|I3LHI4 I3LHI4 "Ubiquitin carboxyl-terminal hydrolase" [Sus scrofa (taxid:9823)]

 Score = 418 (152.2 bits), Expect = 5.5e-41, Sum P(2) = 5.5e-41
 Identities = 111/304 (36%), Positives = 155/304 (50%)

Query:   222 DLDDILVCKEALELLTVCFXXXXXXXXXXXXEPKERLFAHFLCDTLLLCDEKIIRACVQE 281
             DL+D  VC EALE++T+CF              KE+ +  F+ D LL C  K +R   QE
Sbjct:    95 DLEDEQVCCEALEVMTLCFALIPTALDALS---KEKAWQTFIIDLLLHCHSKTVRQVAQE 151

Query:   282 QLTLSVTLSYAYASNAEQACXXXXXXXXXXXXTSDALETRVYTKSAEYFQLFCRTLNFV- 340
             Q  L  T                         T  A E   +  S +YF L    LN+  
Sbjct:   152 QFFLMCTRC---CMGHRPLLFFITLLFTVLGST--ARERAKH--SGDYFTLLRHLLNYAY 204

Query:   341 SSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKSGQRDI---LLQGHLSIVKELV 397
             +S++ I    VL         L  E+  LKR+    K++G+  +   +L+GHL + KEL+
Sbjct:   205 NSNINIPNAEVL---------LNNEIDWLKRIRDDVKRTGETGVEETILEGHLGVTKELL 255

Query:   398 CFLNSEKKMEFGVTNG---LIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVCQSPES 454
              F   EKK   G   G   LI++LI+D++FP S + L+  + GE+   +  P VC SP +
Sbjct:   256 AFQTPEKKYHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIP-VCGSPST 314

Query:   455 ISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCA----EPLTEWDYLPPIGPKPPKGFV 510
             I+AGF LL+ L  G V NLK +V  LT+M+Y   A    E LTEW+YLPP+GP+PPKGFV
Sbjct:   315 INAGFELLVALAVGCVRNLKQIVDSLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKGFV 374

Query:   511 WPKS 514
               K+
Sbjct:   375 GLKN 378

GO:0008234 "cysteine-type peptidase activity" evidence=IEA

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA

UNIPROTKB|Q93008 USP9X "Probable ubiquitin carboxyl-terminal hydrolase FAF-X" [Homo sapiens (taxid:9606)]

 Score = 423 (154.0 bits), Expect = 3.2e-40, Sum P(2) = 3.2e-40
 Identities = 112/304 (36%), Positives = 156/304 (51%)

Query:   222 DLDDILVCKEALELLTVCFXXXXXXXXXXXXEPKERLFAHFLCDTLLLCDEKIIRACVQE 281
             DL+D  VC EALE++T+CF              KE+ +  F+ D LL C  K +R   QE
Sbjct:  1278 DLEDEQVCCEALEVMTLCFALIPTALDALS---KEKAWQTFIIDLLLHCHSKTVRQVAQE 1334

Query:   282 QLTLSVTLSYAYASNAEQACXXXXXXXXXXXXTSDALETRVYTKSAEYFQLFCRTLNFV- 340
             Q  L  T                         T  A E   +  S +YF L    LN+  
Sbjct:  1335 QFFLMCTRC---CMGHRPLLFFITLLFTVLGST--ARERAKH--SGDYFTLLRHLLNYAY 1387

Query:   341 SSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKSGQRDI---LLQGHLSIVKELV 397
             +S++ +    VL         L  E+  LKR+    K++G+  I   +L+GHL + KEL+
Sbjct:  1388 NSNINVPNAEVL---------LNNEIDWLKRIRDDVKRTGETGIEETILEGHLGVTKELL 1438

Query:   398 CFLNSEKKMEFGVTNG---LIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVCQSPES 454
              F  SEKK   G   G   LI++LI+D++FP S + L+  + GE+   +  P VC SP +
Sbjct:  1439 AFQTSEKKFHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIP-VCGSPPT 1497

Query:   455 ISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCA----EPLTEWDYLPPIGPKPPKGFV 510
             I+AGF LL+ L  G V NLK +V  LT+M+Y   A    E LTEW+YLPP+GP+PPKGFV
Sbjct:  1498 INAGFELLVALAVGCVRNLKQIVDSLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKGFV 1557

Query:   511 WPKS 514
               K+
Sbjct:  1558 GLKN 1561

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0007059 "chromosome segregation" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0045177 "apical part of cell" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0016579 "protein deubiquitination" evidence=IDA

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=IMP;TAS

GO:0030509 "BMP signaling pathway" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004197 "cysteine-type endopeptidase activity" evidence=TAS

GO:0007292 "female gamete generation" evidence=TAS

GO:0008234 "cysteine-type peptidase activity" evidence=TAS

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=TAS

GO:0004221 "ubiquitin thiolesterase activity" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0006351 "transcription, DNA-dependent" evidence=TAS

GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=TAS

GO:0010467 "gene expression" evidence=TAS

GO:0070410 "co-SMAD binding" evidence=IPI

UNIPROTKB|F1RX17 LOC100517440 "Ubiquitin carboxyl-terminal hydrolase" [Sus scrofa (taxid:9823)]

 Score = 418 (152.2 bits), Expect = 6.8e-40, Sum P(2) = 6.8e-40
 Identities = 111/304 (36%), Positives = 155/304 (50%)

Query:   222 DLDDILVCKEALELLTVCFXXXXXXXXXXXXEPKERLFAHFLCDTLLLCDEKIIRACVQE 281
             DL+D  VC EALE++T+CF              KE+ +  F+ D LL C  K +R   QE
Sbjct:   536 DLEDEQVCCEALEVMTLCFALIPTALDALS---KEKAWQTFIIDLLLHCHSKTVRQVAQE 592

Query:   282 QLTLSVTLSYAYASNAEQACXXXXXXXXXXXXTSDALETRVYTKSAEYFQLFCRTLNFV- 340
             Q  L  T                         T  A E   +  S +YF L    LN+  
Sbjct:   593 QFFLMCTRC---CMGHRPLLFFITLLFTVLGST--ARERAKH--SGDYFTLLRHLLNYAY 645

Query:   341 SSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKSGQRDI---LLQGHLSIVKELV 397
             +S++ I    VL         L  E+  LKR+    K++G+  +   +L+GHL + KEL+
Sbjct:   646 NSNINIPNAEVL---------LNNEIDWLKRIRDDVKRTGETGVEETILEGHLGVTKELL 696

Query:   398 CFLNSEKKMEFGVTNG---LIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVCQSPES 454
              F   EKK   G   G   LI++LI+D++FP S + L+  + GE+   +  P VC SP +
Sbjct:   697 AFQTPEKKYHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIP-VCGSPST 755

Query:   455 ISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCA----EPLTEWDYLPPIGPKPPKGFV 510
             I+AGF LL+ L  G V NLK +V  LT+M+Y   A    E LTEW+YLPP+GP+PPKGFV
Sbjct:   756 INAGFELLVALAVGCVRNLKQIVDSLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKGFV 815

Query:   511 WPKS 514
               K+
Sbjct:   816 GLKN 819

GO:0008234 "cysteine-type peptidase activity" evidence=IEA

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA

UNIPROTKB|E2RBU9 USP9X "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 415 (151.1 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
 Identities = 111/304 (36%), Positives = 154/304 (50%)

Query:   222 DLDDILVCKEALELLTVCFXXXXXXXXXXXXEPKERLFAHFLCDTLLLCDEKIIRACVQE 281
             DL+D  VC EALE++T+CF              KE+ +  F+ D LL C  K +R   QE
Sbjct:  1283 DLEDEQVCCEALEVMTLCFALIPTALDALS---KEKAWQTFIIDLLLHCHSKTVRQVAQE 1339

Query:   282 QLTLSVTLSYAYASNAEQACXXXXXXXXXXXXTSDALETRVYTKSAEYFQLFCRTLNFV- 340
             Q  L  T                         T  A E   +  S +YF L    LN+  
Sbjct:  1340 QFFLMCTRC---CMGHRPLLFFITLLFTVLGST--ARERAKH--SGDYFTLLRHLLNYAY 1392

Query:   341 SSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKS---GQRDILLQGHLSIVKELV 397
             +S++ I    VL         L  E+  LKR+    K++   G  + +L+GHL + KEL+
Sbjct:  1393 NSNINIPNAEVL---------LNNEIDWLKRIRDDVKRTDETGVEETILEGHLGVTKELL 1443

Query:   398 CFLNSEKKMEFGVTNG---LIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVCQSPES 454
              F   EKK   G   G   LI++LI+D++FP S + L+  + GE+   +  P VC SP +
Sbjct:  1444 AFQTPEKKYHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIP-VCSSPAT 1502

Query:   455 ISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCA----EPLTEWDYLPPIGPKPPKGFV 510
             I+AGF LL+ L  G V NLK +V  LT+M+Y   A    E LTEW+YLPP+GP+PPKGFV
Sbjct:  1503 INAGFELLVALAVGCVRNLKQIVDSLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKGFV 1562

Query:   511 WPKS 514
               K+
Sbjct:  1563 GLKN 1566

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA

UNIPROTKB|G5E630 LOC790347 "Ubiquitin carboxyl-terminal hydrolase" [Bos taurus (taxid:9913)]

 Score = 416 (151.5 bits), Expect = 2.8e-39, Sum P(2) = 2.8e-39
 Identities = 111/304 (36%), Positives = 155/304 (50%)

Query:   222 DLDDILVCKEALELLTVCFXXXXXXXXXXXXEPKERLFAHFLCDTLLLCDEKIIRACVQE 281
             DL+D  VC EA+E++T+CF              KE+ +  F+ D LL C  K +R   QE
Sbjct:  1278 DLEDEQVCCEAMEVMTLCFALIPTALDTLS---KEKAWQTFIIDLLLHCHSKTVRQVAQE 1334

Query:   282 QLTLSVTLSYAYASNAEQACXXXXXXXXXXXXTSDALETRVYTKSAEYFQLFCRTLNFV- 340
             Q  L  T                         T  A E   +  S +YF L    LN+  
Sbjct:  1335 QFFLMCTRC---CMGHRPLLFFITLLFTVLGST--ARERAKH--SGDYFTLLRHLLNYAY 1387

Query:   341 SSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKSGQRDI---LLQGHLSIVKELV 397
             +S++ I    VL         L  E+  LKR+    K++G+  I   +L+GHL + KEL+
Sbjct:  1388 NSNINIPNAEVL---------LNNEIDWLKRIRDDVKRTGETGIEETILEGHLGVTKELL 1438

Query:   398 CFLNSEKKMEFGVTNG---LIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVCQSPES 454
              F   EKK   G   G   LI++LI+D++FP S + L+  + GE+   +  P VC SP +
Sbjct:  1439 AFQTPEKKYHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIP-VCGSPAT 1497

Query:   455 ISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCA----EPLTEWDYLPPIGPKPPKGFV 510
             I+AGF LL+ L  G V NLK +V  LT+M+Y   A    E LTEW+YLPP+GP+PPKGFV
Sbjct:  1498 INAGFELLVALAVGCVRNLKQIVDSLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKGFV 1557

Query:   511 WPKS 514
               K+
Sbjct:  1558 GLKN 1561

GO:0070410 "co-SMAD binding" evidence=IEA

GO:0045177 "apical part of cell" evidence=IEA

GO:0030509 "BMP signaling pathway" evidence=IEA

GO:0016579 "protein deubiquitination" evidence=IEA

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008234 "cysteine-type peptidase activity" evidence=IEA

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA

UNIPROTKB|E1BWJ4 USP9X "Ubiquitin carboxyl-terminal hydrolase" [Gallus gallus (taxid:9031)]

 Score = 425 (154.7 bits), Expect = 4.5e-39, Sum P(2) = 4.5e-39
 Identities = 111/304 (36%), Positives = 157/304 (51%)

Query:   222 DLDDILVCKEALELLTVCFXXXXXXXXXXXXEPKERLFAHFLCDTLLLCDEKIIRACVQE 281
             D++D  VC EALE++T+CF              KE+ +  F+ D LL C  KI+R   QE
Sbjct:  1279 DMEDEQVCCEALEVMTLCFALIPTALDALS---KEKAWQTFIIDLLLHCHSKIVRQMAQE 1335

Query:   282 QLTLSVTLSYAYASNAEQACXXXXXXXXXXXXTSDALETRVYTKSAEYFQLFCRTLNFV- 340
             Q  L  T          Q               S A E   +  S +YF L    LN+  
Sbjct:  1336 QFFLMATRCCM-----GQRPLLFFITLLFTVLGSTARERAKH--SGDYFTLLRHLLNYAY 1388

Query:   341 SSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKSGQRDI---LLQGHLSIVKELV 397
             +S++ +    VL         L  E+  LKR+    K++G+  +   +L+GHL + KEL+
Sbjct:  1389 NSNINVPNAEVL---------LNNEIDWLKRIRDEVKRTGETGVEETILEGHLGVTKELL 1439

Query:   398 CFLNSEKKMEFGVTNG---LIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVCQSPES 454
              F   EKK   G   G   LI++LI+D++FP S + L+  + GE+   +  P VC SP +
Sbjct:  1440 AFQTPEKKYHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIP-VCSSPAT 1498

Query:   455 ISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCA----EPLTEWDYLPPIGPKPPKGFV 510
             I+AGF LL+ L  G V NLK +V  LT+M+Y   A    E LTEW+YLPP+GP+PPKGFV
Sbjct:  1499 INAGFELLVALAVGCVRNLKQIVDTLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKGFV 1558

Query:   511 WPKS 514
               K+
Sbjct:  1559 GLKN 1562

GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0008234 "cysteine-type peptidase activity" evidence=IEA

UNIPROTKB|E1BWJ5 USP9X "Ubiquitin carboxyl-terminal hydrolase" [Gallus gallus (taxid:9031)]

 Score = 425 (154.7 bits), Expect = 5.7e-39, Sum P(2) = 5.7e-39
 Identities = 111/304 (36%), Positives = 157/304 (51%)

Query:   222 DLDDILVCKEALELLTVCFXXXXXXXXXXXXEPKERLFAHFLCDTLLLCDEKIIRACVQE 281
             D++D  VC EALE++T+CF              KE+ +  F+ D LL C  KI+R   QE
Sbjct:  1278 DMEDEQVCCEALEVMTLCFALIPTALDALS---KEKAWQTFIIDLLLHCHSKIVRQMAQE 1334

Query:   282 QLTLSVTLSYAYASNAEQACXXXXXXXXXXXXTSDALETRVYTKSAEYFQLFCRTLNFV- 340
             Q  L  T          Q               S A E   +  S +YF L    LN+  
Sbjct:  1335 QFFLMATRCCM-----GQRPLLFFITLLFTVLGSTARERAKH--SGDYFTLLRHLLNYAY 1387

Query:   341 SSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKSGQRDI---LLQGHLSIVKELV 397
             +S++ +    VL         L  E+  LKR+    K++G+  +   +L+GHL + KEL+
Sbjct:  1388 NSNINVPNAEVL---------LNNEIDWLKRIRDEVKRTGETGVEETILEGHLGVTKELL 1438

Query:   398 CFLNSEKKMEFGVTNG---LIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVCQSPES 454
              F   EKK   G   G   LI++LI+D++FP S + L+  + GE+   +  P VC SP +
Sbjct:  1439 AFQTPEKKYHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIP-VCSSPAT 1497

Query:   455 ISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCA----EPLTEWDYLPPIGPKPPKGFV 510
             I+AGF LL+ L  G V NLK +V  LT+M+Y   A    E LTEW+YLPP+GP+PPKGFV
Sbjct:  1498 INAGFELLVALAVGCVRNLKQIVDTLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKGFV 1557

Query:   511 WPKS 514
               K+
Sbjct:  1558 GLKN 1561

GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0008234 "cysteine-type peptidase activity" evidence=IEA

RGD|1560056 Usp9x "ubiquitin specific peptidase 9, X-linked" [Rattus norvegicus (taxid:10116)]

 Score = 417 (151.9 bits), Expect = 5.8e-39, Sum P(2) = 5.8e-39
 Identities = 110/304 (36%), Positives = 155/304 (50%)

Query:   222 DLDDILVCKEALELLTVCFXXXXXXXXXXXXEPKERLFAHFLCDTLLLCDEKIIRACVQE 281
             DL+D  VC EALE++T+CF              KE+ +  F+ D LL C  K +R   QE
Sbjct:  1278 DLEDEQVCCEALEVMTLCFALIPTALDALS---KEKAWQTFIIDLLLHCHSKTVRQVAQE 1334

Query:   282 QLTLSVTLSYAYASNAEQACXXXXXXXXXXXXTSDALETRVYTKSAEYFQLFCRTLNFV- 340
             Q  L  T                         T  A E   +  S +YF L    LN+  
Sbjct:  1335 QFFLMCTRC---CMGHRPLLFFITLLFTVLGST--ARERAKH--SGDYFTLLRHLLNYAY 1387

Query:   341 SSSVWIGAGSVLSTGIDVEKYLTQELAVLKRLSVGAKKSGQRDI---LLQGHLSIVKELV 397
             +S++ +    VL         L  E+  LKR+    K++G+  +   +L+GHL + KEL+
Sbjct:  1388 NSNINVPNAEVL---------LNNEIDWLKRIRDDVKRTGETGVEETILEGHLGVTKELL 1438

Query:   398 CFLNSEKKMEFGVTNG---LIRDLINDYLFPTSKLMLKLEKTGEISFNEIAPAVCQSPES 454
              F   EKK   G   G   LI++LI+D++FP S + L+  + GE+   +  P VC SP +
Sbjct:  1439 AFQTPEKKFHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIP-VCGSPAT 1497

Query:   455 ISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYPDCA----EPLTEWDYLPPIGPKPPKGFV 510
             I+AGF LL+ L  G V NLK +V  LT+M+Y   A    E LTEW+YLPP+GP+PPKGFV
Sbjct:  1498 INAGFELLVALAVGCVRNLKQIVDSLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKGFV 1557

Query:   511 WPKS 514
               K+
Sbjct:  1558 GLKN 1561

GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=ISO

GO:0008234 "cysteine-type peptidase activity" evidence=IEA

GO:0016579 "protein deubiquitination" evidence=ISO

GO:0030509 "BMP signaling pathway" evidence=ISO

GO:0045177 "apical part of cell" evidence=ISO

GO:0070410 "co-SMAD binding" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	517
pfam05109	830	pfam05109, Herpes_BLLF1, Herpes virus major outer	1e-06
pfam05109	830	pfam05109, Herpes_BLLF1, Herpes virus major outer	1e-05
pfam05109	830	pfam05109, Herpes_BLLF1, Herpes virus major outer	2e-04
COG3889	872	COG3889, COG3889, Predicted solute binding protein	0.001
pfam05109	830	pfam05109, Herpes_BLLF1, Herpes virus major outer	0.002
pfam09726	680	pfam09726, Macoilin, Transmembrane protein	0.002
pfam05109	830	pfam05109, Herpes_BLLF1, Herpes virus major outer	0.004

>gnl|CDD|218439 pfam05109, Herpes_BLLF1, Herpes virus major outer envelope glycoprotein (BLLF1)

 Score = 50.9 bits (121), Expect = 1e-06
 Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 8/155 (5%)

Query: 8   TTGPASPNMNTSNVKPGSTSPNITTGPNIATSSPSDITTHSLVLSISNTSNVKP--GSTS 65
           T+   S   N ++  P  T+PN T+     TS   + T+ + ++    T+   P  G+TS
Sbjct: 489 TSRTTSATPNATSPTPAVTTPNATSPTTQKTSDTPNATSPTPIVIGVTTTATSPPTGTTS 548

Query: 66  PNVTTAP----VSPNITTGPNVATSSPSDITTHSLVLSISPNLDTV--LSLIKNTSNVKP 119
               T+P     SP   T   V TS+PS +T+                   I ++S+  P
Sbjct: 549 VPNATSPQVTEESPVNNTNTPVVTSAPSVLTSAVTTGQHGTGSSPTSQQPGIPSSSHSTP 608

Query: 120 GSTSPNVNTAPTSPNITTGPNIATSSPSDITTHSL 154
            S S +     TS + T G NI   +PS  +T  +
Sbjct: 609 RSNSTSTTPLLTSAHPTGGENITEETPSVPSTTHV 643

This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo. Length = 830

>gnl|CDD|218439 pfam05109, Herpes_BLLF1, Herpes virus major outer envelope glycoprotein (BLLF1)

 Score = 47.9 bits (113), Expect = 1e-05
 Identities = 31/140 (22%), Positives = 52/140 (37%), Gaps = 3/140 (2%)

Query: 8   TTGPASPNMNTSNVKPGSTSPNITTGPNIATSSPSDITTHSLVLSISNTSNVKPGSTSPN 67
           T   A P   T      ST P  T+  +  TS+  + T+ +  ++  N ++     TS  
Sbjct: 463 TVSTADPTSGTPTGTTSSTLPEDTSPTSRTTSATPNATSPTPAVTTPNATSPTTQKTSDT 522

Query: 68  VTTAPVSPNITTGPNVATSSPSDITTHSLVLSISPNLDTVLSLIKNTSNVKPGSTSPNVN 127
                 +P +      ATS P+  T+     S      T  S + NT+     S    + 
Sbjct: 523 PNATSPTPIVIGVTTTATSPPTGTTSVPNATSPQV---TEESPVNNTNTPVVTSAPSVLT 579

Query: 128 TAPTSPNITTGPNIATSSPS 147
           +A T+    TG +  +  P 
Sbjct: 580 SAVTTGQHGTGSSPTSQQPG 599

This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo. Length = 830

>gnl|CDD|218439 pfam05109, Herpes_BLLF1, Herpes virus major outer envelope glycoprotein (BLLF1)

 Score = 43.6 bits (102), Expect = 2e-04
 Identities = 36/150 (24%), Positives = 49/150 (32%), Gaps = 21/150 (14%)

Query: 24  GSTSPNITTGPNIATSSPSDITTHSLVLSISNTSNVKPGSTSPNVTTAPVSPNITTGPNV 83
               P+ TT      S P   T  ++       S   P S +P  TT+   P  T+ P  
Sbjct: 439 VHVEPHKTTAVPTTPSLPPASTGPTV-------STADPTSGTPTGTTSSTLPEDTS-PTS 490

Query: 84  ATSSPSDITTHSLVLSISPNL-----------DTVLSLIKNTSNVKPGSTSPNVNTAPTS 132
            T+S +   T       +PN                S       V   +TSP   T  TS
Sbjct: 491 RTTSATPNATSPTPAVTTPNATSPTTQKTSDTPNATSPTPIVIGVTTTATSPPTGT--TS 548

Query: 133 PNITTGPNIATSSPSDITTHSLVLSISPNL 162
               T P +   SP + T   +V S    L
Sbjct: 549 VPNATSPQVTEESPVNNTNTPVVTSAPSVL 578

This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo. Length = 830

>gnl|CDD|226406 COG3889, COG3889, Predicted solute binding protein [General function prediction only]

 Score = 41.4 bits (97), Expect = 0.001
 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 1/78 (1%)

Query: 23  PGSTSPNITTGPNIATSSPSDITTHSLVLSISNTSNVKPGSTSPNVTTAPVSPNITTGPN 82
           P S +   TT    A S+ S +   + V+     +  +  ++SP+ T    SP  T+   
Sbjct: 777 PQSPTKTETTLSYSAYSNTSILIETTSVVITKTVTQTQTTTSSPSPTQTT-SPTQTSTST 835

Query: 83  VATSSPSDITTHSLVLSI 100
             T+SPS  TT   +   
Sbjct: 836 TTTTSPSQTTTGGGICGP 853

Length = 872

>gnl|CDD|218439 pfam05109, Herpes_BLLF1, Herpes virus major outer envelope glycoprotein (BLLF1)

 Score = 40.9 bits (95), Expect = 0.002
 Identities = 39/151 (25%), Positives = 54/151 (35%), Gaps = 15/151 (9%)

Query: 3   TGPNITTGPA----SPNMNTSNVKPGSTSPNITTGPNIATSSPSDITTHSLVLSISNTSN 58
           T     T P     SP  NT+     S    +T+             T      I ++S+
Sbjct: 547 TSVPNATSPQVTEESPVNNTNTPVVTSAPSVLTSAVTTGQHGTGSSPTSQQP-GIPSSSH 605

Query: 59  VKPGSTSPNVTTAPVSPNITTGPNVATSSPSDITTHSL-VLSISPNLDTVLSLIKNTSNV 117
             P S S + T    S + T G N+   +PS  +T  +  LS  P   T        S  
Sbjct: 606 STPRSNSTSTTPLLTSAHPTGGENITEETPSVPSTTHVSTLSPGPGPGT----TSQVSGP 661

Query: 118 KPGSTSPNVNTAPTSPNITTG-PNIATSSPS 147
              STS      P   ++T G PN   +SPS
Sbjct: 662 GNSSTSRY----PGEVHVTEGMPNPNATSPS 688

This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo. Length = 830

>gnl|CDD|220365 pfam09726, Macoilin, Transmembrane protein

 Score = 40.7 bits (95), Expect = 0.002
 Identities = 34/175 (19%), Positives = 52/175 (29%), Gaps = 14/175 (8%)

Query: 3   TGPNITTGPASPNMNTSNVKPGSTSPNITTGPNIATSSPSDITTHSLVLSISN--TSNVK 60
           +    +T    P  N+      S S N  T P +  S       HS      +   +N  
Sbjct: 221 SKGLTSTKELVPVQNSGGNHSLSKSSNSQT-PELEYSEKGKDHHHSHNHQHHSIGINNHH 279

Query: 61  PGSTSPNVTTAPV----------SPNITTGPNVATSSPSDITTHSLVLSISPNLDTVLSL 110
                  + T  V          S + T G    TS+ S     S+    S +       
Sbjct: 280 SKHADSKLQTIEVIENHSNKSRPSSSSTNGSKETTSNSSSAAAGSIGSKSSKSAKHSNRN 339

Query: 111 IKNTSNVKPGSTSPNVNTAPTSPNITTGPNIATSSPSDITTHSLVLSISPNLDTV 165
             N+S     S + +V ++  S N  +    A+ S S         S      TV
Sbjct: 340 KSNSSPKSHSSANGSVPSSSVSDN-ESKQKRASKSSSGARDSKKDASGMSANGTV 393

This entry is a highly conserved protein present in eukaryotes. Length = 680

>gnl|CDD|218439 pfam05109, Herpes_BLLF1, Herpes virus major outer envelope glycoprotein (BLLF1)

 Score = 39.8 bits (92), Expect = 0.004
 Identities = 29/148 (19%), Positives = 55/148 (37%), Gaps = 14/148 (9%)

Query: 5   PNITTGPASPNMNTSNVKPGSTSPNITTGPNIATSSPSDITTHSLVLSISNTSNVKPGST 64
           P+ TT   +           + S    T      ++ S +   +   S + +        
Sbjct: 443 PHKTTAVPTTPSLPPASTGPTVSTADPTSGTPTGTTSSTLPEDTSPTSRTTS----ATPN 498

Query: 65  SPNVTTAPVSPNIT------TGPNVATSSPSDITTHSLVLSISPNLDTVLSLIKNTSNVK 118
           + + T A  +PN T      T      +SP+ I       + SP   T  + + N ++ +
Sbjct: 499 ATSPTPAVTTPNATSPTTQKTSDTPNATSPTPIVIGVTTTATSPPTGT--TSVPNATSPQ 556

Query: 119 PGSTSPNVNTAPTSPNITTGPNIATSSP 146
               SP  NT   +P +T+ P++ TS+ 
Sbjct: 557 VTEESPVNNT--NTPVVTSAPSVLTSAV 582

This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo. Length = 830

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	517
KOG1866|consensus	944		99.21
PF12755	97	Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region	83.17
PF10165	446	Ric8: Guanine nucleotide exchange factor synembryn	81.85

>KOG1866|consensus

Probab=99.21  E-value=1e-11  Score=136.92  Aligned_cols=98  Identities=44%  Similarity=0.772  Sum_probs=85.1

Q ss_pred             HhccCCCChhhhHhhhhcCCCCccCcCCCccCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHhccCC----CCCCCCCC
Q psy15877        419 INDYLFPTSKLMLKLEKTGEISFNEIAPAVCQSPESISAGFSLLIGLCTGSVPNLKLLVAMLTDMFYP----DCAEPLTE  494 (517)
Q Consensus       419 f~dfLFPas~~~~~~~~~~e~~~~d~~~PkCKS~~SR~AAfdLLveL~k~c~~Nl~~Lle~L~emh~s----~~~~~~~e  494 (517)
                      .++|+||+++.++++++.+..+ +++..|+|.++.|..|+|++|+++|.+|+.|++.+++.++++.+.    -..+..+|
T Consensus         2 ~~d~~~~a~~~~l~~m~~~~lP-E~p~lPvcrsp~tIr~~~qllvA~~~~cV~nlkrs~~~~~tl~l~~k~~~s~q~lyE   80 (944)
T KOG1866|consen    2 IDDFHFPASFVGLKNMRLGPLP-EEPALPVCRSPYTIRAGFQLLVALAIGCVYNLKRSVDCLMTLYYMFKATTSCQALYE   80 (944)
T ss_pred             CccccccHHHHHHHHHhcCCCc-ccCCCcccCCCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccC
Confidence            4689999999999999998875 344888999999999999999999999999999999977776332    12257899


Q ss_pred             CcccCCCCCCCCCCcccccCCCC
Q psy15877        495 WDYLPPIGPKPPKGFVWPKSKVK  517 (517)
Q Consensus       495 WdYlP~~~~RS~cGYVGLKNa~~  517 (517)
                      |+|+|+++.|++-||||||||-|
T Consensus        81 ~~YlppVgsRpp~gfVGLKNaga  103 (944)
T KOG1866|consen   81 WEYLPPVGSRPPEGFVGLKNAGA  103 (944)
T ss_pred             cccCCCcCCCCCcceeeecCCCc
Confidence            99999999999999999999865

>PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region

Probab=83.17  E-value=20  Score=31.32  Aligned_cols=22  Identities=14%  Similarity=0.010  Sum_probs=20.5

Q ss_pred             cCCCChHHHHHHHHHHHHHhcc
Q psy15877        268 LLCDEKIIRACVQEQLTLSVTL  289 (517)
Q Consensus       268 L~sP~~~VR~~a~~~L~~Lc~~  289 (517)
                      +.+++..||..+|+.||.+++.
T Consensus        36 ~~D~d~rVRy~AcEaL~ni~k~   57 (97)
T PF12755_consen   36 FDDQDSRVRYYACEALYNISKV   57 (97)
T ss_pred             cCCCcHHHHHHHHHHHHHHHHH
Confidence            6999999999999999999865

>PF10165 Ric8: Guanine nucleotide exchange factor synembryn; InterPro: IPR019318 Ric8 is involved in the EGL-30 neurotransmitter signalling pathway []

Probab=81.85  E-value=52  Score=36.15  Aligned_cols=34  Identities=24%  Similarity=0.280  Sum_probs=27.3

Q ss_pred             CCCchhHHHHHHHHHHHHHHHHhCHHHHHHHHcC
Q psy15877        220 DIDLDDILVCKEALELLTVCFLLNNSLLKALLKE  253 (517)
Q Consensus       220 ~l~~eD~~V~~eALeLLv~cL~l~~~~l~sL~~~  253 (517)
                      ..+..|.-++.|||.+|.-++.+++.....|...
T Consensus        40 ~~~~~~~~v~~EALKCL~N~lf~s~~aR~~~~~~   73 (446)
T PF10165_consen   40 EFESPDPDVSREALKCLCNALFLSPSARQIFVDL   73 (446)
T ss_pred             cccCCChHHHHHHHHHHHHHHhCCHHHHHHHHHc
Confidence            4566789999999999999999887777666654

It is a guanine nucleotide exchange factor [] that regulates neurotransmitter secretion.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	517
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-08
1wck_A	220	BCLA protein; collagen-like protein, bacterial sur	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 55.6 bits (133), Expect = 3e-08
 Identities = 49/358 (13%), Positives = 98/358 (27%), Gaps = 107/358 (29%)

Query: 219 KDI----------DLDDILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLL 268
           KDI          + D    CK+  ++     +L+   +  ++           L  TLL
Sbjct: 19  KDILSVFEDAFVDNFD----CKDVQDMPKS--ILSKEEIDHIIMSKDAVSGTLRLFWTLL 72

Query: 269 LCDEKIIRACVQEQLTLS---VTLSYAYASNAEQACLVAFLQLLFPLLTSDALETRVYTK 325
              E++++  V+E L ++   +                 +++    L        +V+ K
Sbjct: 73  SKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYND----NQVFAK 128

Query: 326 -----SAEYFQLFCRT-LNFVSSSVWI------GAG-SVLSTGIDVEKYLTQELAVLKR- 371
                   Y +L  R  L  +  +  +      G+G + ++  +DV         V  + 
Sbjct: 129 YNVSRLQPYLKL--RQALLELRPAKNVLIDGVLGSGKTWVA--LDV----CLSYKVQCKM 180

Query: 372 ------LSVGAKKSGQRDIL--LQG-HLSIVKELVCFLNSEK--KMEFGVTNGLIRDLIN 420
                 L++    S    +L  LQ     I        +     K+        +R L+ 
Sbjct: 181 DFKIFWLNLKNCNS-PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLK 239

Query: 421 DYLFPTSKLML-------------------------------KLEKTGEISFNEIAPAVC 449
              +    L+L                                   T  IS +  +  + 
Sbjct: 240 SKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL- 298

Query: 450 QSPESISAGFSLLIGLCTGSVPN---------LKLLVAMLTDMFYPDCAEPLTEWDYL 498
              E  S      +      +P          L ++   + D          T WD  
Sbjct: 299 TPDEVKSL-LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDG-------LAT-WDNW 347

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 55.6 bits (133), Expect = 3e-08
 Identities = 53/337 (15%), Positives = 92/337 (27%), Gaps = 128/337 (37%)

Query: 77  ITTG-PNVATSSPSDITTHSLVLSISPNL--DTVLSLIKNTSNVKPGSTSPNVNTAPTSP 133
           +TT    V     +  TTH  +   S  L  D V SL+    + +P              
Sbjct: 270 LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQD------------ 317

Query: 134 NITTGPNIATSSPSDITTHSLVLSISPNLDTVLSLIKIIWAASRGDFEM----KAAPVEV 189
                       P +      VL+ +P        + II  + R         K    + 
Sbjct: 318 -----------LPRE------VLTTNP-----R-RLSIIAESIRDGLATWDNWKHVNCDK 354

Query: 190 FTRRTNEMF--ALDGEENSSAPGGDNAQGDTKDI--DL----DDILVCKEALELL----- 236
            T    E     L+  E              + +   L        +    L L+     
Sbjct: 355 LTT-IIESSLNVLEPAE-------------YRKMFDRLSVFPPSAHIPTILLSLIWFDVI 400

Query: 237 ------TVCFLLNNSLLKALLKEPKERLFA-HFL-CDTLLLCDE------KII------R 276
                  V  L   SL++   K+PKE   +   +  +  +  +        I+      +
Sbjct: 401 KSDVMVVVNKLHKYSLVE---KQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPK 457

Query: 277 ACVQEQLTLSVTLSYAYA------SNAEQACLVAFLQLLFPLLTSDALETRVYTKSAEYF 330
               + L       Y Y+       N E    +     LF ++  D              
Sbjct: 458 TFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMT----LFRMVFLD-------------- 499

Query: 331 QLFCRTLNFV------SSSVWIGAGSVLSTGIDVEKY 361
                   F+       S+ W  +GS+L+T   ++ Y
Sbjct: 500 ------FRFLEQKIRHDSTAWNASGSILNTLQQLKFY 530

>1wck_A BCLA protein; collagen-like protein, bacterial surface antigen, jelly- roll topology, structural protein; 1.36A {Bacillus anthracis} Length = 220

 Score = 41.5 bits (97), Expect = 3e-04
 Identities = 23/144 (15%), Positives = 42/144 (29%), Gaps = 5/144 (3%)

Query: 3   TGPNITTGPASPNMNT-SNVKPGSTSPNITTGPNIATSSPSDITTHSLVLSISNTSNVKP 61
           TGP   TG       T      G   P      N       D+  +  V   +  S    
Sbjct: 58  TGPTGPTGATGLTGPTGPTGPSGLGLPAGLYAFNSGG-ISLDLGINDPVPFNTVGSQFGT 116

Query: 62  GSTSPNVTTAPVSPNIT--TGPNVATSSPSDITTHSLVLSISPNLDTVLSLIKNTSNVKP 119
             +  +  T  +S            T++ S +   ++ ++  P   T  SLI   + +  
Sbjct: 117 AISQLDADTFVISETGFYKITVIANTATASVLGGLTIQVNGVPVPGTGSSLISLGAPIV- 175

Query: 120 GSTSPNVNTAPTSPNITTGPNIAT 143
                 + T P+   +       +
Sbjct: 176 IQAITQITTTPSLVEVIVTGLGLS 199

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	517
4hxt_A	252	De novo protein OR329; structural genomics, PSI-bi	89.68
3grl_A	651	General vesicular transport factor P115; vesicle t	85.26
4db8_A	252	Armadillo-repeat protein; solenoid repeat, de novo	85.2

>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}

Probab=89.68  E-value=6.7  Score=35.35  Aligned_cols=64  Identities=16%  Similarity=0.033  Sum_probs=47.7

Q ss_pred             CCchhHHHHHHHHHHHHHHHHhCHHHHHHHHcCcccchHHHHHHHHhcCCCChHHHHHHHHHHHHHhcc
Q psy15877        221 IDLDDILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLLLCDEKIIRACVQEQLTLSVTL  289 (517)
Q Consensus       221 l~~eD~~V~~eALeLLv~cL~l~~~~l~sL~~~~~~~~~~~fL~dLLL~sP~~~VR~~a~~~L~~Lc~~  289 (517)
                      +..+|..+..+|+..|.......++....+.+.   .-++.++ .+ |.++++.||..++..|..++..
T Consensus        11 L~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~---g~i~~L~-~l-l~~~~~~v~~~a~~~L~~l~~~   74 (252)
T 4hxt_A           11 LTSTDSETQKEAARDLAEIASGPASAIKAIVDA---GGVEVLV-KL-LTSTDSEVQKEAARALANIASG   74 (252)
T ss_dssp             TTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHT---THHHHHH-HH-TTCSCHHHHHHHHHHHHHHTTS
T ss_pred             HcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHC---CCHHHHH-HH-HhCCCHHHHHHHHHHHHHHHcC
Confidence            445567788888888754444456688888877   5555554 55 5888999999999999999865

>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A

Probab=85.26  E-value=21  Score=39.81  Aligned_cols=108  Identities=19%  Similarity=0.109  Sum_probs=71.3

Q ss_pred             CCchhHHHHHHHHHHHHHHHHhCHH-HHHHHHcCcccchHHHHHHHHhcCCCChHHHHHHHHHHHHHhcccccccchhHH
Q psy15877        221 IDLDDILVCKEALELLTVCFLLNNS-LLKALLKEPKERLFAHFLCDTLLLCDEKIIRACVQEQLTLSVTLSYAYASNAEQ  299 (517)
Q Consensus       221 l~~eD~~V~~eALeLLv~cL~l~~~-~l~sL~~~~~~~~~~~fL~dLLL~sP~~~VR~~a~~~L~~Lc~~s~s~~~~~~~  299 (517)
                      ++.+|..+=-+++.+|...+..+++ .++.+...   +.--.-|+++ |.++++.||.++.-.|..++....     . -
T Consensus       131 L~~~df~vR~~alqlL~~L~~~r~~~~Q~~Il~~---p~gi~~Lv~l-L~d~rE~iRneallLL~~Lt~~n~-----~-i  200 (651)
T 3grl_A          131 LEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVS---PMGVSRLMDL-LADSREVIRNDGVLLLQALTRSNG-----A-I  200 (651)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHS---TTHHHHHHGG-GGCSSHHHHHHHHHHHHHHHTTCH-----H-H
T ss_pred             hcCccHHHHHHHHHHHHHHHhcCcHHHHHHHHhC---cccHHHHHHH-HhCchHHHHHHHHHHHHHHhcCCH-----H-H
Confidence            5678888889999999988888877 88988877   4433344566 699999999999999999987621     1 2


Q ss_pred             hHHHHH---HHHHHhhhhhhhhhccCCCCCHHHHHHHHHHhhh
Q psy15877        300 ACLVAF---LQLLFPLLTSDALETRVYTKSAEYFQLFCRTLNF  339 (517)
Q Consensus       300 ~pllff---L~lLl~~L~~~a~e~~~~~~C~EYF~LLCrLLd~  339 (517)
                      +-+..|   ...||..+..... -..+---.+-+.|+..|+++
T Consensus       201 QklVAFEnaFe~Lf~Ii~~Eg~-~~Ggivv~DCL~ll~nLLr~  242 (651)
T 3grl_A          201 QKIVAFENAFERLLDIITEEGN-SDGGIVVEDCLILLQNLLKN  242 (651)
T ss_dssp             HHHHHHTTHHHHHHHHHHHHTG-GGSHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHhccHHHHHHHHHhcCC-CccchhHHHHHHHHHHHHhc
Confidence            222223   4555554333210 00012234667777777755

>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}

Probab=85.20  E-value=8.5  Score=35.13  Aligned_cols=64  Identities=13%  Similarity=0.067  Sum_probs=48.2

Q ss_pred             CCchhHHHHHHHHHHHHHHHHhCHHHHHHHHcCcccchHHHHHHHHhcCCCChHHHHHHHHHHHHHhcc
Q psy15877        221 IDLDDILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLLLCDEKIIRACVQEQLTLSVTL  289 (517)
Q Consensus       221 l~~eD~~V~~eALeLLv~cL~l~~~~l~sL~~~~~~~~~~~fL~dLLL~sP~~~VR~~a~~~L~~Lc~~  289 (517)
                      +.++|..+..+|...|...+.......+.+.+.   .-++.++ .+ |.++++.||..++..|..++..
T Consensus        21 L~s~~~~~~~~a~~~L~~~l~~~~~~~~~~~~~---g~i~~L~-~l-L~~~~~~v~~~a~~~L~~l~~~   84 (252)
T 4db8_A           21 LNSDDMQEQLSATRKFSQILSDGNEQIQAVIDA---GALPALV-QL-LSSPNEQILQEALWALSNIASG   84 (252)
T ss_dssp             HHSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHT---THHHHHH-HG-GGCSCHHHHHHHHHHHHHHTTS
T ss_pred             HcCCCHHHHHHHHHHHHHHHcCCCchHHHHHHc---CcHHHHH-HH-HcCCCHHHHHHHHHHHHHHhcC
Confidence            556677788888888755555566777778777   5555554 44 5788899999999999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	517
d1q1sc_	434	Importin alpha {Mouse (Mus musculus) [TaxId: 10090	85.93
d1xqra1	264	Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi	85.92

>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: Importin alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=85.93  E-value=6.7  Score=35.87  Aligned_cols=62  Identities=16%  Similarity=-0.054  Sum_probs=46.3

Q ss_pred             chhHHHHHHHHHHHHHHHHhCHHHHHHHHcCcccchHHHHHHHHhcCCCChHHHHHHHHHHHHHhcc
Q psy15877        223 LDDILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLLLCDEKIIRACVQEQLTLSVTL  289 (517)
Q Consensus       223 ~eD~~V~~eALeLLv~cL~l~~~~l~sL~~~~~~~~~~~fL~dLLL~sP~~~VR~~a~~~L~~Lc~~  289 (517)
                      .+|..|-.+|...|..+-...++....+.+.   .-.+.++ .+ |.++++.+|..++..|..+|..
T Consensus        68 ~~~~~v~~~a~~~L~~la~~~~~~~~~i~~~---~~i~~l~-~~-L~~~~~~~~~~a~~~L~nl~~~  129 (434)
T d1q1sc_          68 TDCSPIQFESAWALTNIASGTSEQTKAVVDG---GAIPAFI-SL-LASPHAHISEQAVWALGNIAGD  129 (434)
T ss_dssp             GGGHHHHHHHHHHHHHHHTSCHHHHHHHHHT---THHHHHH-HH-TTCSCHHHHHHHHHHHHHHHTT
T ss_pred             CCCHHHHHHHHHHHHHHhcCChhhhhHhhhc---cchhhhh-hc-cccCCHHHHHHHHHHHHHHhcc
Confidence            4566777788888753334456777788877   5666665 44 6899999999999999999875

>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: HspBP1 domain
domain: Hsp70-binding protein 1 (HspBP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.92  E-value=6.3  Score=34.79  Aligned_cols=63  Identities=14%  Similarity=-0.000  Sum_probs=50.0

Q ss_pred             CchhHHHHHHHHHHHHHHHHhCHHHHHHHHcCcccchHHHHHHHHhcCCCChHHHHHHHHHHHHHhcc
Q psy15877        222 DLDDILVCKEALELLTVCFLLNNSLLKALLKEPKERLFAHFLCDTLLLCDEKIIRACVQEQLTLSVTL  289 (517)
Q Consensus       222 ~~eD~~V~~eALeLLv~cL~l~~~~l~sL~~~~~~~~~~~fL~dLLL~sP~~~VR~~a~~~L~~Lc~~  289 (517)
                      ...|......|++.|. .+..+.+....|.+.   ..+..++ ..+|.++++.||..++..|..+|..
T Consensus        27 ~~~~~~~~~~Al~~L~-~L~~~~d~a~~l~~~---gg~~~ll-~~ll~s~~~~vr~~A~~~L~~l~~~   89 (264)
T d1xqra1          27 QAADQQEREGALELLA-DLCENMDNAADFCQL---SGMHLLV-GRYLEAGAAGLRWRAAQLIGTCSQN   89 (264)
T ss_dssp             HHHHHHHHHHHHHHHH-HHHTSHHHHHHHHHT---THHHHHH-HTTTTCSSHHHHHHHHHHHHHHHTT
T ss_pred             cCCCHHHHHHHHHHHH-HHHcCHHHHHHHHHc---CCHHHHH-HHHhCCCCHHHHHHHHHHHHHHHHH
Confidence            3567788888888874 556677777788888   7776665 4557999999999999999999975