Psyllid ID: psy15927

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------10
Protein Sequence
MRGGTSPITDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVVVANYSPAGNVVRYFNENVPNVVKK
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccEEEEEEcccEEEEEEEEcccccEEEEEEEcccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEEEcccEEEEEEEEcccccEEEEEEEcccccccccHHHHccccccc
Coil and Loop (DISEMBL)
mrggtspitdeQAVQNAVDSWYNEIKdyklfgreptmqelmsgsptghftQLIWKGTKAVGigiakgdqnRVVVVANyspagnvvryfnenvpnvvkk
Flexible Loop (DISEMBL)
mrggtspitdeqavqNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVVVANyspagnvvryfnenvpnvvkk
Low Complexity Region (SEG)
MRGGTSPITDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVVVANYSPAGNVVRYFNENVPNVVKK
Disordered region (IsUnstruct)
***************NAVDSWYNEIKDYKLFGRE**********PTGHFTQLIWKGTKAVGIGIAKGDQNRVVVVANYSPAGNVVRYFNENV******
Disordered Region (DISOPRED)
*************VQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVVVANYSPAGNVVRYFNE*VPNV***
Disordered Region (DISEMBL)
*********DEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVVVANYSPAGNVVRYFNENVPNVVKK
Disordered Region (DISPRO)
**********EQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVVVANYSPAGNVVRYFNENVPNVVK*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRGGTSPITDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVVVANYSPAGNVVRYFNENVPNVVKK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	98	2.2.26 [Sep-21-2011]
Q9CYL5	154	Golgi-associated plant pa	yes	N/A	0.775	0.493	0.423	1e-11
Q9H4G4	154	Golgi-associated plant pa	yes	N/A	0.765	0.487	0.428	1e-10
P36110	329	Protein PRY2 OS=Saccharom	yes	N/A	0.704	0.209	0.402	2e-08
P47032	299	Protein PRY1 OS=Saccharom	no	N/A	0.663	0.217	0.432	2e-07
Q4V9Y5	500	Cysteine-rich secretory p	no	N/A	0.693	0.136	0.387	8e-07
P35781	202	Venom allergen 5.01 OS=Ve	N/A	N/A	0.765	0.371	0.345	1e-06
Q8BZQ2	495	Cysteine-rich secretory p	no	N/A	0.673	0.133	0.384	1e-06
P35792	164	Pathogenesis-related prot	N/A	N/A	0.663	0.396	0.366	1e-06
A9YME1	232	Venom allergen 5 OS=Micro	N/A	N/A	0.663	0.280	0.347	2e-06
Q60477	244	Cysteine-rich secretory p	yes	N/A	0.795	0.319	0.340	2e-06

>sp|Q9CYL5|GAPR1_MOUSE Golgi-associated plant pathogenesis-related protein 1 OS=Mus musculus GN=Glipr2 PE=2 SV=3

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 9/85 (10%)

Query: 11  EQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQN 70
           +Q  ++  D WY+EIK Y         Q+    S TGHFT ++WK TK +G+G A     
Sbjct: 73  DQTGKDVADRWYSEIKSY-------NFQQPGFTSGTGHFTAMVWKNTKKIGVGKASASDG 125

Query: 71  RVVVVANYSPAGNVVR--YFNENVP 93
              VVA Y PAGN+V   +F ENVP
Sbjct: 126 SSFVVARYFPAGNIVNQGFFEENVP 150

Mus musculus (taxid: 10090)

>sp|Q9H4G4|GAPR1_HUMAN Golgi-associated plant pathogenesis-related protein 1 OS=Homo sapiens GN=GLIPR2 PE=1 SV=3

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 9/84 (10%)

Query: 11  EQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQN 70
           +Q  +   D WY+EIK+Y         Q+    S TGHFT ++WK TK +G+G A     
Sbjct: 73  DQTGKEVADRWYSEIKNY-------NFQQPGFTSGTGHFTAMVWKNTKKMGVGKASASDG 125

Query: 71  RVVVVANYSPAGNVVR--YFNENV 92
              VVA Y PAGNVV   +F ENV
Sbjct: 126 SSFVVARYFPAGNVVNEGFFEENV 149

Homo sapiens (taxid: 9606)

>sp|P36110|PRY2_YEAST Protein PRY2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PRY2 PE=3 SV=1

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 8/77 (10%)

Query: 17  AVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGI-AKGDQNRVVVV 75
           +VD+WYNEI  Y      P   E       GHFTQ++WKGT  VG G+ + G +    ++
Sbjct: 256 SVDAWYNEITSYDY--SNPGFSE-----SAGHFTQVVWKGTSEVGCGLKSCGGEWGDYII 308

Query: 76  ANYSPAGNVVRYFNENV 92
            +Y  AGNV+  F +NV
Sbjct: 309 CSYKAAGNVIGEFADNV 325

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|P47032|PRY1_YEAST Protein PRY1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PRY1 PE=1 SV=1

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/81 (43%), Positives = 43/81 (53%), Gaps = 16/81 (19%)

Query: 17  AVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGI-----AKGDQNR 71
           AVD+WYNEI +Y      P        S TGHFTQ++WK T  VG GI     A GD   
Sbjct: 226 AVDAWYNEISNYDF--SNPGFS-----SNTGHFTQVVWKSTTQVGCGIKTCGGAWGD--- 275

Query: 72  VVVVANYSPAGNVVRYFNENV 92
             V+ +Y PAGN    + +NV
Sbjct: 276 -YVICSYDPAGNYEGEYADNV 295

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q4V9Y5|CRLD2_XENTR Cysteine-rich secretory protein LCCL domain-containing 2 OS=Xenopus tropicalis GN=crispld2 PE=2 SV=1

 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 12/80 (15%)

Query: 18  VDSWYNEIKDYKL-FGRE--PTMQELMSGSPTGHFTQLIWKGTKAVGIGI-------AKG 67
           V SWY+E+KDY   +  E  P   E  SG    H+TQ++W  T  VG  +         G
Sbjct: 129 VQSWYDEVKDYTYPYPHECNPYCPERCSGPMCTHYTQIVWATTTKVGCAVNVCKRMNVWG 188

Query: 68  D--QNRVVVVANYSPAGNVV 85
           D  +N V +V NYSP GN +
Sbjct: 189 DIWENAVYLVCNYSPKGNWI 208

Promotes matrix assembly.

Xenopus tropicalis (taxid: 8364)

>sp|P35781|VA51_VESCR Venom allergen 5.01 OS=Vespa crabro PE=1 SV=1

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 9/84 (10%)

Query: 4   GTSPITDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIG 63
           G++   +  +V N V  W +E+KDY+    +  + ++      GH+TQ++W  TK +G G
Sbjct: 116 GSTTADNFGSVSNMVKMWEDEVKDYQYGSPKNKLNKV------GHYTQMVWAKTKEIGCG 169

Query: 64  IAKGDQN---RVVVVANYSPAGNV 84
             K  +N   R  +V NY PAGNV
Sbjct: 170 SIKYIENGWHRHYLVCNYGPAGNV 193

Vespa crabro (taxid: 7445)

>sp|Q8BZQ2|CRLD2_MOUSE Cysteine-rich secretory protein LCCL domain-containing 2 OS=Mus musculus GN=Crispld2 PE=1 SV=1

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 12/78 (15%)

Query: 18  VDSWYNEIKDYKL-FGRE--PTMQELMSGSPTGHFTQLIWKGTKAVGIGIAK-------G 67
           V SWY+E+KDY   +  E  P  +E  SG    H+TQ++W  T  +G  +         G
Sbjct: 128 VQSWYDEVKDYTYPYPHECTPRCRERCSGPMCTHYTQMVWATTNKIGCAVHTCRNMNVWG 187

Query: 68  D--QNRVVVVANYSPAGN 83
           D  +N V +V NYSP GN
Sbjct: 188 DTWENAVYLVCNYSPKGN 205

Promotes matrix assembly.

Mus musculus (taxid: 10090)

>sp|P35792|PR12_HORVU Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 6/71 (8%)

Query: 16  NAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNR-VVV 74
           +AV+SW NE KDY  +G         +G   GH+TQ++W+ + ++G      + NR V +
Sbjct: 94  DAVNSWVNEKKDYN-YGSN----TCAAGKVCGHYTQVVWRASTSIGCARVVCNNNRGVFI 148

Query: 75  VANYSPAGNVV 85
             NY P GN+V
Sbjct: 149 TCNYEPRGNIV 159

Probably involved in the defense reaction of plants against pathogens.

Hordeum vulgare (taxid: 4513)

>sp|A9YME1|VA5_MICHY Venom allergen 5 OS=Microctonus hyperodae PE=2 SV=1

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 7/72 (9%)

Query: 17  AVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQN---RVV 73
           +V+SWY+E+KD+       +++E      TGH++Q++W  T  VG G+ +   +     +
Sbjct: 157 SVNSWYSEVKDFD----NRSVREYKFEFTTGHYSQVVWGDTTHVGCGLVQYKDSGFYTTM 212

Query: 74  VVANYSPAGNVV 85
           V  NYSPAGN++
Sbjct: 213 VACNYSPAGNLI 224

Microctonus hyperodae (taxid: 165561)

>sp|Q60477|CRIS2_CAVPO Cysteine-rich secretory protein 2 OS=Cavia porcellus GN=CRISP2 PE=1 SV=1

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 10/88 (11%)

Query: 9   TDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKG- 67
           +D  +  +A+ SW++E +D+  FG  P     +     GH+TQL+W  +  VG GIA   
Sbjct: 103 SDPSSWSDAIQSWFDESQDFT-FGVGPKSHNAV----VGHYTQLVWYSSYLVGCGIAYCP 157

Query: 68  --DQNRVVVVANYSPAGNVVRYFNENVP 93
             D  +   V  Y PAGN V  + +N P
Sbjct: 158 NQDSLKYYYVCQYCPAGNNV--YTKNTP 183

May regulate some ion channels' activity and therebye regulate calcium fluxes during sperm capacitation.

Cavia porcellus (taxid: 10141)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	98
405957390	380	Golgi-associated plant pathogenesis-rela	0.785	0.202	0.476	5e-14
242003910	251	conserved hypothetical protein [Ixodes s	0.836	0.326	0.494	9e-14
91077960	583	PREDICTED: similar to LOC495415 protein	0.704	0.118	0.486	2e-13
291226126	324	PREDICTED: GLI pathogenesis-related 2-li	0.744	0.225	0.462	5e-13
195997441	771	hypothetical protein TRIADDRAFT_51643 [T	0.714	0.090	0.518	1e-12
148298863	371	SCP-related protein [Bombyx mori] gi|110	0.724	0.191	0.474	1e-12
427790149	293	Putative tick salivary antigen-5 protein	0.836	0.279	0.471	3e-12
328722183	577	PREDICTED: hypothetical protein LOC10016	0.826	0.140	0.416	3e-12
195115064	145	GI14160 [Drosophila mojavensis] gi|19391	0.693	0.468	0.513	3e-12
193664656	457	PREDICTED: hypothetical protein LOC10016	0.724	0.155	0.474	3e-12

>gi|405957390|gb|EKC23604.1| Golgi-associated plant pathogenesis-related protein 1 [Crassostrea gigas]

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 7/84 (8%)

Query: 10 DEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQ 69
          D  + Q   D WY+EIK Y+ FG EP  + L +G    HFTQ++WKG++ +G+G A+   
Sbjct: 9  DTYSGQEVTDQWYSEIKLYR-FGGEP--RNLSAG----HFTQVVWKGSREIGVGKARSKD 61

Query: 70 NRVVVVANYSPAGNVVRYFNENVP 93
           +++VVANY PAGNV+  F+ENVP
Sbjct: 62 GKILVVANYRPAGNVIGRFSENVP 85

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|242003910|ref|XP_002436232.1| conserved hypothetical protein [Ixodes scapularis] gi|215499568|gb|EEC09062.1| conserved hypothetical protein [Ixodes scapularis]

 Score = 80.9 bits (198), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 44/89 (49%), Positives = 61/89 (68%), Gaps = 7/89 (7%)

Query: 5   TSPITDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGI 64
           +S  T E   + AVDSWY+EIKD++ FG EP  + L SG    HFTQ+IWKG+  +G G 
Sbjct: 166 SSDPTKEVTGREAVDSWYSEIKDHR-FGGEP--RSLGSG----HFTQVIWKGSTELGTGR 218

Query: 65  AKGDQNRVVVVANYSPAGNVVRYFNENVP 93
           A+    +++VVANY+PAGN++  F +NVP
Sbjct: 219 ARTATGKLLVVANYNPAGNMIGSFAQNVP 247

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91077960|ref|XP_967490.1| PREDICTED: similar to LOC495415 protein [Tribolium castaneum] gi|270002291|gb|EEZ98738.1| hypothetical protein TcasGA2_TC001293 [Tribolium castaneum]

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/76 (48%), Positives = 52/76 (68%), Gaps = 7/76 (9%)

Query: 18  VDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVVVAN 77
           VD WY E++ +  FGREP   +      +GHFTQ++WK ++ +G+G+AK  Q  + VVAN
Sbjct: 342 VDHWYEEVR-FHPFGREPNSLK------SGHFTQVVWKSSELLGVGVAKNSQGSIYVVAN 394

Query: 78  YSPAGNVVRYFNENVP 93
           YSPAGN V ++ ENVP
Sbjct: 395 YSPAGNFVGHYVENVP 410

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|291226126|ref|XP_002733044.1| PREDICTED: GLI pathogenesis-related 2-like [Saccoglossus kowalevskii]

 Score = 78.6 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 7/80 (8%)

Query: 13  AVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRV 72
           +V+ A ++WY+EI+DY     +P  +     S  GHFTQ++WK TK +GIG AK  + R+
Sbjct: 71  SVEQATENWYSEIRDYDF--SKPGFK-----SGIGHFTQVVWKATKEMGIGKAKSKKGRI 123

Query: 73  VVVANYSPAGNVVRYFNENV 92
            +VANY PAGN++R F  NV
Sbjct: 124 YIVANYKPAGNMMRDFAVNV 143

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|195997441|ref|XP_002108589.1| hypothetical protein TRIADDRAFT_51643 [Trichoplax adhaerens] gi|190589365|gb|EDV29387.1| hypothetical protein TRIADDRAFT_51643 [Trichoplax adhaerens]

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/79 (51%), Positives = 50/79 (63%), Gaps = 9/79 (11%)

Query: 15  QNAVDSWYNEIKDYKLFGREPTMQELMSGSP-TGHFTQLIWKGTKAVGIGIAKGDQNRVV 73
             AVD WY+EIKDY    R  T       +P TGHFTQ++W+ T  VG+ +AKG  N  V
Sbjct: 697 HEAVDMWYDEIKDYNF--RRATF------TPGTGHFTQVVWRETTEVGVAMAKGKNNYTV 748

Query: 74  VVANYSPAGNVVRYFNENV 92
           VVANY PAGN++  F ENV
Sbjct: 749 VVANYKPAGNMMGKFKENV 767

Source: Trichoplax adhaerens

Species: Trichoplax adhaerens

Genus: Trichoplax

Phylum: Placozoa

Superkingdom: Eukaryota

>gi|148298863|ref|NP_001091773.1| SCP-related protein [Bombyx mori] gi|110559661|gb|ABG76067.1| SCP-related protein [Bombyx mori]

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/78 (47%), Positives = 55/78 (70%), Gaps = 7/78 (8%)

Query: 15  QNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVV 74
           ++ VD WY+EI ++K FGREPT  +      +GHF+Q+IW+ T+ +G+G+AK  + +V V
Sbjct: 296 RDPVDKWYSEINNHK-FGREPTNLD------SGHFSQVIWEETREIGVGVAKSKEGQVYV 348

Query: 75  VANYSPAGNVVRYFNENV 92
           VA YSP GNV+  F +NV
Sbjct: 349 VAYYSPPGNVIGSFTKNV 366

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427790149|gb|JAA60526.1| Putative tick salivary antigen-5 protein [Rhipicephalus pulchellus]

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 7/89 (7%)

Query: 5   TSPITDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGI 64
           +S  T E   Q AVDSWY+EIK ++ FG EP  + L SG    HFTQ+IWK +  +G   
Sbjct: 208 SSDPTKEVTGQEAVDSWYSEIKQHQ-FGCEP--RSLGSG----HFTQVIWKASTELGSAR 260

Query: 65  AKGDQNRVVVVANYSPAGNVVRYFNENVP 93
           A+    +++VVANY+PAGN++  F +NVP
Sbjct: 261 ARTATGKLIVVANYNPAGNLIGSFAQNVP 289

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328722183|ref|XP_001948456.2| PREDICTED: hypothetical protein LOC100162791 [Acyrthosiphon pisum]

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 3/84 (3%)

Query: 15  QNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVV 74
           + AVDSWYNEI  + +   EP   EL     T H TQL+WK +  +G+G++K       V
Sbjct: 456 EQAVDSWYNEITKFNIADEEP---ELGDNIATHHMTQLLWKSSTKLGVGVSKSSNGMYNV 512

Query: 75  VANYSPAGNVVRYFNENVPNVVKK 98
           VANY P+GNV  +F +N+P + ++
Sbjct: 513 VANYDPSGNVRGFFKDNLPEIKQE 536

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195115064|ref|XP_002002087.1| GI14160 [Drosophila mojavensis] gi|193912662|gb|EDW11529.1| GI14160 [Drosophila mojavensis]

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/76 (51%), Positives = 50/76 (65%), Gaps = 8/76 (10%)

Query: 17  AVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVVVA 76
           AV SWY+EIKDY    R P+ Q     S TGHFTQ++WKG++ +G GIA+   N V +V 
Sbjct: 74  AVKSWYDEIKDYNF--RSPSFQ-----SSTGHFTQVVWKGSRLLGAGIAQRG-NTVYIVC 125

Query: 77  NYSPAGNVVRYFNENV 92
           NY P GN++  F ENV
Sbjct: 126 NYDPPGNMMNNFRENV 141

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193664656|ref|XP_001946213.1| PREDICTED: hypothetical protein LOC100165954 isoform 1 [Acyrthosiphon pisum]

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 7/78 (8%)

Query: 18  VDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVVVAN 77
           VDSWY EIK +  FGREPT  +      +GHF+Q++W  +K +G+G+A     ++ VVA 
Sbjct: 224 VDSWYEEIK-FHPFGREPTTLK------SGHFSQVVWATSKEMGVGVASNRSGQIFVVAC 276

Query: 78  YSPAGNVVRYFNENVPNV 95
           Y PAGN +  F ENVP V
Sbjct: 277 YDPAGNFLGQFRENVPPV 294

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	98
ZFIN|ZDB-GENE-030131-4424	543	glipr2 "GLI pathogenesis-relat	0.693	0.125	0.525	1.6e-13
MGI|MGI:1917770	154	Glipr2 "GLI pathogenesis-relat	0.775	0.493	0.435	2.7e-13
RGD|1583669	150	Glipr2 "GLI pathogenesis-relat	0.775	0.506	0.435	3.4e-13
UNIPROTKB|E1BYA2	154	GLIPR2 "Uncharacterized protei	0.765	0.487	0.440	7.1e-13
UNIPROTKB|F1ST88	154	LOC100739112 "Uncharacterized	0.765	0.487	0.452	7.1e-13
UNIPROTKB|Q0VCH9	154	GLIPR2 "Uncharacterized protei	0.765	0.487	0.440	1.9e-12
UNIPROTKB|J9NX46	153	GLIPR2 "Uncharacterized protei	0.765	0.490	0.440	1.9e-12
UNIPROTKB|Q9H4G4	154	GLIPR2 "Golgi-associated plant	0.765	0.487	0.440	1.9e-12
FB|FBgn0031412	146	CG16995 [Drosophila melanogast	0.704	0.472	0.441	1.7e-11
ZFIN|ZDB-GENE-041010-53	154	glipr2l "GLI pathogenesis-rela	0.765	0.487	0.392	3.5e-11

ZFIN|ZDB-GENE-030131-4424 glipr2 "GLI pathogenesis-related 2" [Danio rerio (taxid:7955)]

 Score = 185 (70.2 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 41/78 (52%), Positives = 49/78 (62%)

Query:    17 AVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVVVA 76
             AVDSWY EIKDY  F R P        S TGHFTQ++WK TK +G+G+A  D N + VV 
Sbjct:    76 AVDSWYGEIKDYN-FSR-PGFS-----SKTGHFTQVVWKDTKELGVGLAT-DGNTIFVVG 127

Query:    77 NYSPAGNVVR--YFNENV 92
              Y PAGN+    YF +NV
Sbjct:   128 QYLPAGNIANAGYFEKNV 145

GO:0005576 "extracellular region" evidence=IEA

MGI|MGI:1917770 Glipr2 "GLI pathogenesis-related 2" [Mus musculus (taxid:10090)]

 Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
 Identities = 37/85 (43%), Positives = 49/85 (57%)

Query:    11 EQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQN 70
             +Q  ++  D WY+EIK Y    ++P      SG  TGHFT ++WK TK +G+G A     
Sbjct:    73 DQTGKDVADRWYSEIKSYNF--QQPGFT---SG--TGHFTAMVWKNTKKIGVGKASASDG 125

Query:    71 RVVVVANYSPAGNVVR--YFNENVP 93
                VVA Y PAGN+V   +F ENVP
Sbjct:   126 SSFVVARYFPAGNIVNQGFFEENVP 150

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005576 "extracellular region" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

RGD|1583669 Glipr2 "GLI pathogenesis-related 2" [Rattus norvegicus (taxid:10116)]

 Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
 Identities = 37/85 (43%), Positives = 48/85 (56%)

Query:    11 EQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQN 70
             +Q  +   D WY+EIK Y    ++P      SG  TGHFT ++WK TK +G+G A     
Sbjct:    69 DQTGKEVADRWYSEIKSYNF--QQPGFT---SG--TGHFTAMVWKNTKKIGVGKASASDG 121

Query:    71 RVVVVANYSPAGNVVR--YFNENVP 93
                VVA Y PAGN+V   +F ENVP
Sbjct:   122 SSFVVARYFPAGNIVNQGFFEENVP 146

GO:0005576 "extracellular region" evidence=IEA

UNIPROTKB|E1BYA2 GLIPR2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
 Identities = 37/84 (44%), Positives = 48/84 (57%)

Query:    11 EQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQN 70
             +Q  ++  D WY+EIK+Y    + P      SG  TGHFT ++WK TK +G+G A     
Sbjct:    73 DQPGKDVADRWYSEIKNYSF--QNPGFS---SG--TGHFTAMVWKSTKKMGVGKASASDG 125

Query:    71 RVVVVANYSPAGNVVR--YFNENV 92
                VVA Y PAGNVV   Y+ ENV
Sbjct:   126 STFVVARYDPAGNVVNPGYYEENV 149

GO:0005576 "extracellular region" evidence=IEA

UNIPROTKB|F1ST88 LOC100739112 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
 Identities = 38/84 (45%), Positives = 48/84 (57%)

Query:    11 EQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQN 70
             +Q  +   D WY+EIK+Y    ++P      SG  TGHFT ++WK TK +G+G A     
Sbjct:    73 DQTGKEVADRWYSEIKNYNF--QQPGFT---SG--TGHFTAMVWKNTKKMGVGKASASDG 125

Query:    71 RVVVVANYSPAGNVVR--YFNENV 92
                VVA Y PAGNVV   YF ENV
Sbjct:   126 SSFVVARYFPAGNVVNQGYFEENV 149

GO:0005576 "extracellular region" evidence=IEA

UNIPROTKB|Q0VCH9 GLIPR2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 37/84 (44%), Positives = 48/84 (57%)

Query:    11 EQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQN 70
             +Q  +   D WY+EIK+Y    ++P      SG  TGHFT ++WK TK +G+G A     
Sbjct:    73 DQTGKEVADRWYSEIKNYNF--QQPGFT---SG--TGHFTAMVWKNTKKMGVGKASASDG 125

Query:    71 RVVVVANYSPAGNVVR--YFNENV 92
                VVA Y PAGNVV   +F ENV
Sbjct:   126 SSFVVARYFPAGNVVNQGFFEENV 149

GO:0005576 "extracellular region" evidence=IEA

UNIPROTKB|J9NX46 GLIPR2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 37/84 (44%), Positives = 48/84 (57%)

Query:    11 EQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQN 70
             +Q  +   D WY+EIK+Y    ++P      SG  TGHFT ++WK TK +G+G A     
Sbjct:    72 DQTGKEVADRWYSEIKNYNF--QQPGFT---SG--TGHFTAMVWKNTKKMGVGKASASDG 124

Query:    71 RVVVVANYSPAGNVVR--YFNENV 92
                VVA Y PAGNVV   +F ENV
Sbjct:   125 SSFVVARYFPAGNVVNQGFFEENV 148

GO:0005576 "extracellular region" evidence=IEA

UNIPROTKB|Q9H4G4 GLIPR2 "Golgi-associated plant pathogenesis-related protein 1" [Homo sapiens (taxid:9606)]

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 37/84 (44%), Positives = 48/84 (57%)

Query:    11 EQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQN 70
             +Q  +   D WY+EIK+Y    ++P      SG  TGHFT ++WK TK +G+G A     
Sbjct:    73 DQTGKEVADRWYSEIKNYNF--QQPGFT---SG--TGHFTAMVWKNTKKMGVGKASASDG 125

Query:    71 RVVVVANYSPAGNVVR--YFNENV 92
                VVA Y PAGNVV   +F ENV
Sbjct:   126 SSFVVARYFPAGNVVNEGFFEENV 149

GO:0005576 "extracellular region" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

FB|FBgn0031412 CG16995 [Drosophila melanogaster (taxid:7227)]

 Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 34/77 (44%), Positives = 45/77 (58%)

Query:    16 NAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVVV 75
             +AV SWY EI+ Y      P+ Q    G+ TGHFTQ++WK +  +G+G AK     + VV
Sbjct:    73 DAVRSWYEEIRQYNW--NSPSFQ----GN-TGHFTQVVWKSSTELGVGFAKSGST-IYVV 124

Query:    76 ANYSPAGNVVRYFNENV 92
              NY+P GN    F ENV
Sbjct:   125 CNYNPPGNYNNLFRENV 141

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=IEA

ZFIN|ZDB-GENE-041010-53 glipr2l "GLI pathogenesis-related 2, like" [Danio rerio (taxid:7955)]

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 33/84 (39%), Positives = 45/84 (53%)

Query:    11 EQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQN 70
             +Q  ++  D WYNE+  Y     +P      SG  TGHFT ++WKG+K +G+G A     
Sbjct:    73 DQTGKDVTDRWYNEVNQYNF--NQPGFS---SG--TGHFTAVVWKGSKKLGVGKAVASDG 125

Query:    71 RVVVVANYSPAGNVVR--YFNENV 92
                VVA Y PAGN+    +F  NV
Sbjct:   126 STFVVARYFPAGNITNQGHFQANV 149

GO:0005576 "extracellular region" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	98
cd05382	132	cd05382, SCP_GAPR-1_like, SCP_GAPR-1_like: SCP-lik	2e-29
cd05384	129	cd05384, SCP_PRY1_like, SCP_PRY1_like: SCP-like ex	3e-17
cd00168	122	cd00168, SCP, SCP: SCP-like extracellular protein	1e-13
cd05380	144	cd05380, SCP_euk, SCP_euk: SCP-like extracellular	2e-13
smart00198	144	smart00198, SCP, SCP / Tpx-1 / Ag5 / PR-1 / Sc7 fa	6e-12
cd05381	136	cd05381, SCP_PR-1_like, SCP_PR-1_like: SCP-like ex	5e-09
cd05383	138	cd05383, SCP_CRISP, SCP_CRISP: SCP-like extracellu	4e-08
cd05385	144	cd05385, SCP_GLIPR-1_like, SCP_GLIPR-1_like: SCP-l	2e-07
pfam00188	121	pfam00188, CAP, Cysteine-rich secretory protein fa	4e-07
cd05559	136	cd05559, SCP_HrTT-1, SCP_HrTT-1: SCP-like extracel	2e-04

>gnl|CDD|240182 cd05382, SCP_GAPR-1_like, SCP_GAPR-1_like: SCP-like extracellular protein domain, golgi-associated plant pathogenesis related protein (GAPR)-like sub-family

 Score =  101 bits (254), Expect = 2e-29
 Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 10/84 (11%)

Query: 1   MRGGTSPITDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAV 60
              G+ P   +   + AVDSWYNEIK Y  F +          S TGHFTQ++WK +  +
Sbjct: 59  YASGSGP---DLTGEEAVDSWYNEIKKYD-FNKPG------FSSKTGHFTQVVWKSSTEL 108

Query: 61  GIGIAKGDQNRVVVVANYSPAGNV 84
           G+G+AK  +  V VVA Y PAGNV
Sbjct: 109 GVGVAKSKKGCVYVVARYRPAGNV 132

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. GAPR-1 and GLIPR-2 appear to be synonyms. Length = 132

>gnl|CDD|240184 cd05384, SCP_PRY1_like, SCP_PRY1_like: SCP-like extracellular protein domain, PRY1-like sub-family restricted to fungi

 Score = 70.4 bits (173), Expect = 3e-17
 Identities = 29/73 (39%), Positives = 36/73 (49%), Gaps = 8/73 (10%)

Query: 14  VQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAK-GDQNRV 72
             +AVD+WY+EI+DY                 TGHFTQL+WK T  VG      G     
Sbjct: 63  GTSAVDAWYDEIEDYDY-------SNPGFSEATGHFTQLVWKSTTQVGCAYKDCGGAWGW 115

Query: 73  VVVANYSPAGNVV 85
            +V  Y PAGNV+
Sbjct: 116 YIVCEYDPAGNVI 128

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. PRY1 is a yeast protein that is up-regulated in core ESCRT mutants. This PRY1-like group also contains fruiting body proteins SC7/14 from Schizophyllum commune. Length = 129

>gnl|CDD|238097 cd00168, SCP, SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes

 Score = 61.3 bits (149), Expect = 1e-13
 Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 7/71 (9%)

Query: 8   ITDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKG 67
            + +     AV +WYNEIK+Y       +       S TGH+TQ++WK T  +G G+A  
Sbjct: 58  GSYDMTGPAAVQAWYNEIKNYNFGQPGFS-------SGTGHYTQVVWKNTTKIGCGVAFC 110

Query: 68  DQNRVVVVANY 78
             N   VV NY
Sbjct: 111 GSNSYYVVCNY 121

This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. This family also includes CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Roles for CRISP, in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ transporting ryanodine receptors. Little is known about the biological roles of the bacterial and archaeal SCP domains. Length = 122

>gnl|CDD|240180 cd05380, SCP_euk, SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes

 Score = 61.4 bits (149), Expect = 2e-13
 Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 7/81 (8%)

Query: 2   RGGTSPITDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVG 61
            G ++  T E+  ++AV++WYNE+KDY       +       S  GHFTQ++W  T  VG
Sbjct: 68  AGSSTGSTVEELAEDAVNAWYNELKDYGF----GSNPTNNFNSGIGHFTQMVWAKTTKVG 123

Query: 62  IGIA---KGDQNRVVVVANYS 79
             +A   K   N+ VVV NYS
Sbjct: 124 CAVARCGKDGGNKTVVVCNYS 144

This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 144

>gnl|CDD|214553 smart00198, SCP, SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains

 Score = 57.4 bits (139), Expect = 6e-12
 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 7/81 (8%)

Query: 3   GGTSPITDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGI 62
             +S    +     AV  WY+E +DY  +          +    GH+TQ++W  T  VG 
Sbjct: 68  WSSSTALPDTYASAAVQLWYDEFQDYG-YSSNTCKD---TNGKIGHYTQVVWAKTYKVGC 123

Query: 63  GIAKGDQN---RVVVVANYSP 80
           G+A        + VVV NY P
Sbjct: 124 GVANCPDGTKKKTVVVCNYDP 144

Human glioma pathogenesis-related protein GliPR and the plant pathogenesis-related protein represent functional links between plant defense systems and human immune system. This family has no known function. Length = 144

>gnl|CDD|240181 cd05381, SCP_PR-1_like, SCP_PR-1_like: SCP-like extracellular protein domain, PR-1 like subfamily

 Score = 49.6 bits (119), Expect = 5e-09
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 6/70 (8%)

Query: 17  AVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNR-VVVV 75
           AV SW +E K Y     +       +G   GH+TQ++W+ T  VG      D    V ++
Sbjct: 67  AVASWVSEKKYY-----DYDSNTCAAGKMCGHYTQVVWRNTTRVGCARVTCDNGGGVFII 121

Query: 76  ANYSPAGNVV 85
            NY P GN +
Sbjct: 122 CNYDPPGNYI 131

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. It also includes CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 136

>gnl|CDD|240183 cd05383, SCP_CRISP, SCP_CRISP: SCP-like extracellular protein domain, CRISP-like sub-family

 Score = 47.3 bits (113), Expect = 4e-08
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 11/79 (13%)

Query: 5   TSPITDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGI 64
           + P +    +Q    +WY+E KD+K +G   T      G+  GH+TQ++W  +  VG  +
Sbjct: 69  SYPRSWSDVIQ----AWYDEYKDFK-YGVGATP----PGAVVGHYTQIVWYKSYLVGCAV 119

Query: 65  AK--GDQNRVVVVANYSPA 81
           A     + +   V +Y PA
Sbjct: 120 AYCPNSKYKYFYVCHYCPA 138

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Involvement of CRISP in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ transporting ryanodine receptors. One member, DE or CRISP-1, has been shown to mediate gamete fusion by binding to the egg surface; a sequence motif in the SCP domain plays a role in that binding. Length = 138

>gnl|CDD|240185 cd05385, SCP_GLIPR-1_like, SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family

 Score = 45.8 bits (109), Expect = 2e-07
 Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 14/75 (18%)

Query: 13  AVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPT-GHFTQLIWKGTKAVGIGIA-----K 66
           + +NAV SWYNE K Y          +  S S   GH+TQ++W  +  VG  +A      
Sbjct: 78  SPKNAVTSWYNEGKFYDF--------DTNSCSRVCGHYTQVVWATSYKVGCAVAFCPNLG 129

Query: 67  GDQNRVVVVANYSPA 81
           G  N  + V NY+PA
Sbjct: 130 GIPNAAIFVCNYAPA 144

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 144

>gnl|CDD|215778 pfam00188, CAP, Cysteine-rich secretory protein family

 Score = 44.5 bits (105), Expect = 4e-07
 Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 6/64 (9%)

Query: 16  NAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNR-VVV 74
            AV++WY+E KDY        +   MS    GH T L+W  +  VG  +AK        V
Sbjct: 63  AAVENWYDEAKDYDA---AVGINAWMSS--PGHRTNLLWPKSTKVGCAVAKCGDGSSYYV 117

Query: 75  VANY 78
           V NY
Sbjct: 118 VCNY 121

This is a large family of cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins (CAP) that are found in a wide range of organisms, including prokaryotes and non-vertebrate eukaryotes, The nine subfamilies of the mammalian CAP 'super'family include: the human glioma pathogenesis-related 1 (GLIPR1), Golgi associated pathogenesis related-1 (GAPR1) proteins, peptidase inhibitor 15 (PI15), peptidase inhibitor 16 (PI16), cysteine-rich secretory proteins (CRISPs), CRISP LCCL domain containing 1 (CRISPLD1), CRISP LCCL domain containing 2 (CRISPLD2), mannose receptor like and the R3H domain containing like proteins. Members are most often secreted and have an extracellular endocrine or paracrine function and are involved in processes including the regulation of extracellular matrix and branching morphogenesis, potentially as either proteases or protease inhibitors; in ion channel regulation in fertility; as tumour suppressor or pro-oncogenic genes in tissues including the prostate; and in cell-cell adhesion during fertilisation. The overall protein structural conservation within the CAP 'super'family results in fundamentally similar functions for the CAP domain in all members, yet the diversity outside of this core region dramatically alters the target specificity and, thus, the biological consequences. The Ca++-chelating function would fit with the various signalling processes (e.g. the CRISP proteins) that members of this family are involved in, and also the sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine from Heloderma horridum horridum blocks the Ca++ transporting ryanodine receptors. Length = 121

>gnl|CDD|240186 cd05559, SCP_HrTT-1, SCP_HrTT-1: SCP-like extracellular protein domain in HrTT-1, a tail-tip epidermis marker in ascidians

 Score = 37.5 bits (87), Expect = 2e-04
 Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 12/72 (16%)

Query: 14  VQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGD----- 68
              AV+ W NE  DY                  GH+TQ++W  T  +G G    +     
Sbjct: 69  ATKAVEDWNNEKLDYNY-----NTNTCAPNKMCGHYTQVVWANTFKIGCGSYFCETLEVL 123

Query: 69  --QNRVVVVANY 78
             +N  ++V NY
Sbjct: 124 RWENATLLVCNY 135

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 136

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	98
cd05381	136	SCP_PR-1_like SCP_PR-1_like: SCP-like extracellula	99.91
cd05384	129	SCP_PRY1_like SCP_PRY1_like: SCP-like extracellula	99.89
KOG3017|consensus	225		99.88
cd05382	132	SCP_GAPR-1_like SCP_GAPR-1_like: SCP-like extracel	99.86
cd05383	138	SCP_CRISP SCP_CRISP: SCP-like extracellular protei	99.84
cd05385	144	SCP_GLIPR-1_like SCP_GLIPR-1_like: SCP-like extrac	99.83
smart00198	144	SCP SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extra	99.82
cd05559	136	SCP_HrTT-1 SCP_HrTT-1: SCP-like extracellular prot	99.79
cd00168	122	SCP SCP: SCP-like extracellular protein domain, fo	99.75
cd05380	144	SCP_euk SCP_euk: SCP-like extracellular protein do	99.75
PF00188	124	CAP: Cysteine-rich secretory protein family; Inter	99.23
cd05379	122	SCP_bacterial SCP_bacterial: SCP-like extracellula	96.47
TIGR02909	127	spore_YkwD uncharacterized protein, YkwD family. M	96.45

>cd05381 SCP_PR-1_like SCP_PR-1_like: SCP-like extracellular protein domain, PR-1 like subfamily

Probab=99.91  E-value=3.7e-24  Score=135.07  Aligned_cols=74  Identities=32%  Similarity=0.597  Sum_probs=63.8

Q ss_pred             HHHHHHHHHHHHHhhcCCCCCCCcccccccCCCCcchhhHhhhcccceEEEEEEEcCC-CCEEEEEEecCCCCCcccccc
Q psy15927         12 QAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQ-NRVVVVANYSPAGNVVRYFNE   90 (98)
Q Consensus        12 ~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~-~~~~~vC~Y~p~GN~~g~~~~   90 (98)
                      ..+.++|+.|++|...|+ +.. +.|   ..+..++|||||||++|++||||++.|.. +..++||+|+|+||+.|+.+|
T Consensus        62 ~~~~~~v~~W~~e~~~y~-~~~-~~~---~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~vvC~Y~p~gn~~g~~~Y  136 (136)
T cd05381          62 WSAADAVASWVSEKKYYD-YDS-NTC---AAGKMCGHYTQVVWRNTTRVGCARVTCDNGGGVFIICNYDPPGNYIGQRPY  136 (136)
T ss_pred             CCHHHHHHHHHhccccCC-CCC-CCc---CCCccchHHHHHHHHhcCEeceEEEEeCCCCcEEEEEEeeCCCCCCCCCCC
Confidence            357889999999999999 776 333   34578999999999999999999999987 347999999999999998875

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. It also includes CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd05384 SCP_PRY1_like SCP_PRY1_like: SCP-like extracellular protein domain, PRY1-like sub-family restricted to fungi

Probab=99.89  E-value=5.9e-23  Score=128.55  Aligned_cols=67  Identities=42%  Similarity=0.765  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCcccccccCCCCcchhhHhhhcccceEEEEEEEcCCC-CEEEEEEecCCCCCcc
Q psy15927         13 AVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQN-RVVVVANYSPAGNVVR   86 (98)
Q Consensus        13 ~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~-~~~~vC~Y~p~GN~~g   86 (98)
                      .+.++|+.|++|...|+ +..+      ..+..++|||||||++|++||||++.|... .+++||+|+|+||+.|
T Consensus        62 ~~~~~v~~W~~e~~~y~-~~~~------~~~~~~~h~tqmvw~~t~~vGCa~~~c~~~~~~~~vC~Y~p~Gn~~g  129 (129)
T cd05384          62 SGTSAVDAWYDEIEDYD-YSNP------GFSEATGHFTQLVWKSTTQVGCAYKDCGGAWGWYIVCEYDPAGNVIG  129 (129)
T ss_pred             CHHHHHHHHHhhhhhCC-CCCC------CCCCcccchhhhhhhccceeeeEEEEeCCCCeEEEEEEEECCCCCCc
Confidence            57899999999999999 8663      345679999999999999999999999873 4789999999999875

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. PRY1 is a yeast protein that is up-regulated in core ESCRT mutants. This PRY1-like group also contains fruiting body proteins SC7/14 from Schizophyllum commune.

>KOG3017|consensus

Probab=99.88  E-value=9.4e-23  Score=137.92  Aligned_cols=88  Identities=26%  Similarity=0.493  Sum_probs=74.5

Q ss_pred             CchHHHHHHHHHHHHHhhcCCCCCCCcccccccCCCCcchhhHhhhcccceEEEEEEEcCCC-----CEEEEEEecCCCC
Q psy15927          9 TDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQN-----RVVVVANYSPAGN   83 (98)
Q Consensus         9 ~~~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~-----~~~~vC~Y~p~GN   83 (98)
                      +.+.....+++.|+.|...|+ +.. +.|.....+..+||||||||++|++||||+++|..+     .+++||+|+|+||
T Consensus       113 ~~~~~~~~a~~~w~~e~~~~~-~~~-~~~~~~~~~~~~gHyTQ~vw~~s~~vGCgv~~c~~~~~~~~~~~~vC~Y~p~g~  190 (225)
T KOG3017|consen  113 SLDTSGALAVEAWESEFQEYD-WSS-NTCSSADFGEGIGHYTQMVWAKSTKVGCGVVRCGNGSNGYNTVAVVCNYDPPGN  190 (225)
T ss_pred             cccccHHHHHHHHHHHHHHcc-Ccc-cccCcccCCCcceEEEEEEEeCCceeceeeccCCCCCCCcceEEEEEEeecCCC
Confidence            344677889999999999999 888 677555568999999999999999999999999887     4699999999955


Q ss_pred             Cc-cccccCCCCCCCC
Q psy15927         84 VV-RYFNENVPNVVKK   98 (98)
Q Consensus        84 ~~-g~~~~nv~~p~~~   98 (98)
                      .. ++.+|..++|.++
T Consensus       191 ~~~~~~~y~~g~~cs~  206 (225)
T KOG3017|consen  191 NINGEIPYKGGKPCSA  206 (225)
T ss_pred             CcCCCCcCCCCCccCC
Confidence            54 4799999988764

>cd05382 SCP_GAPR-1_like SCP_GAPR-1_like: SCP-like extracellular protein domain, golgi-associated plant pathogenesis related protein (GAPR)-like sub-family

Probab=99.86  E-value=3.1e-22  Score=125.29  Aligned_cols=68  Identities=51%  Similarity=0.911  Sum_probs=59.7

Q ss_pred             chHHHHHHHHHHHHHhhcCCCCCCCcccccccCCCCcchhhHhhhcccceEEEEEEEcCCCCEEEEEEecCCCCC
Q psy15927         10 DEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVVVANYSPAGNV   84 (98)
Q Consensus        10 ~~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~vC~Y~p~GN~   84 (98)
                      ....+.++|+.|++|...|+ +...      ..+..+||||||||++|++||||++.|..+.+++||+|+|+||+
T Consensus        65 ~~~~~~~~v~~W~~e~~~y~-~~~~------~~~~~~gh~tqmvw~~t~~vGCa~~~~~~~~~~~vC~Y~p~Gn~  132 (132)
T cd05382          65 PDLTGEEAVDSWYNEIKKYD-FNKP------GFSSKTGHFTQVVWKSSTELGVGVAKSKKGCVYVVARYRPAGNV  132 (132)
T ss_pred             CCCCHHHHHHHHHhccccCC-CCCC------CCCCCCCCeEEeEecCCCceeeEEEEcCCCCEEEEEEEeCCCCC
Confidence            35578999999999999999 7642      34567999999999999999999999987668999999999995

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. GAPR-1 and GLIPR-2 appear to be synonyms.

>cd05383 SCP_CRISP SCP_CRISP: SCP-like extracellular protein domain, CRISP-like sub-family

Probab=99.84  E-value=4.6e-21  Score=121.40  Aligned_cols=64  Identities=31%  Similarity=0.704  Sum_probs=55.6

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCcccccccCCCCcchhhHhhhcccceEEEEEEEcCCC--CEEEEEEecCC
Q psy15927         13 AVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQN--RVVVVANYSPA   81 (98)
Q Consensus        13 ~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~--~~~~vC~Y~p~   81 (98)
                      .+.++|+.||+|..+|+ ++... +   ..+..++|||||||++|++||||++.|..+  .+++||+|+|+
T Consensus        73 ~~~~av~~W~~e~~~y~-~~~~~-~---~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~~~vC~Y~P~  138 (138)
T cd05383          73 SWSDVIQAWYDEYKDFK-YGVGA-T---PPGAVVGHYTQIVWYKSYLVGCAVAYCPNSKYKYFYVCHYCPA  138 (138)
T ss_pred             CHHHHHHHHHHHHHhCC-CCCCC-C---CCCCchhhHHHHHHHhccccceEEEECCCCCcCEEEEEecCCC
Confidence            56889999999999999 87632 2   456889999999999999999999999874  47999999984

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Involvement of CRISP in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ t

>cd05385 SCP_GLIPR-1_like SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family

Probab=99.83  E-value=1.2e-20  Score=120.30  Aligned_cols=63  Identities=38%  Similarity=0.657  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHHHhhcCCCCCCCcccccccCCCCcchhhHhhhcccceEEEEEEEcCCCC-----EEEEEEecCC
Q psy15927         12 QAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNR-----VVVVANYSPA   81 (98)
Q Consensus        12 ~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~-----~~~vC~Y~p~   81 (98)
                      ..+.++|+.||+|..+|+ +... .     .+..++|||||||++|++||||+++|..+.     .++||+|+|+
T Consensus        77 ~~~~~av~~W~~e~~~y~-~~~~-~-----~~~~~ghftqmvw~~t~~vGCa~~~c~~~~~~~~~~~vVC~Y~p~  144 (144)
T cd05385          77 FSPKNAVTSWYNEGKFYD-FDTN-S-----CSRVCGHYTQVVWATSYKVGCAVAFCPNLGGIPNAAIFVCNYAPA  144 (144)
T ss_pred             CCHHHHHHHHHHHHHhCC-CCCC-C-----CCCcccCHHHHHHhhccccceEEEECCCCCCccccEEEEEeCCCC
Confidence            367889999999999999 8763 2     245899999999999999999999997642     6899999983

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>smart00198 SCP SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains

Probab=99.82  E-value=2.5e-20  Score=118.14  Aligned_cols=69  Identities=33%  Similarity=0.689  Sum_probs=58.4

Q ss_pred             CchHHHHHHHHHHHHHhhcCCCCCCCcccccccCCCCcchhhHhhhcccceEEEEEEEcCCCC---EEEEEEecCC
Q psy15927          9 TDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNR---VVVVANYSPA   81 (98)
Q Consensus         9 ~~~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~---~~~vC~Y~p~   81 (98)
                      +....+.++|+.||+|...|+ +... .+..  .+..++|||||||++|++||||++.|.++.   .++||+|+|+
T Consensus        73 ~~~~~~~~av~~W~~e~~~y~-~~~~-~~~~--~~~~~~hftqmvw~~s~~vGCa~~~c~~~~~~~~~~vC~Y~P~  144 (144)
T smart00198       73 LPITYASAAVQLWYDEFQDYG-YSSN-TCKD--TNGKIGHYTQVVWAKTYKVGCGVSNCPDGTKKKTVVVCNYDPP  144 (144)
T ss_pred             ccchhHHHHHHHHHHHHHHcC-CCCC-cccc--CccchhHHHHHHHHhcCCcceEEEECCCCCcceEEEEEecCCC
Confidence            356788999999999999999 8774 3321  367899999999999999999999998765   6999999984

Human glioma pathogenesis-related protein GliPR and the plant pathogenesis-related protein represent functional links between plant defense systems and human immune system. This family has no known function.

>cd05559 SCP_HrTT-1 SCP_HrTT-1: SCP-like extracellular protein domain in HrTT-1, a tail-tip epidermis marker in ascidians

Probab=99.79  E-value=2.3e-19  Score=113.41  Aligned_cols=64  Identities=30%  Similarity=0.544  Sum_probs=54.0

Q ss_pred             hHHHHHHHHHHHHHhhcCCCCCCCcccccccCCCCcchhhHhhhcccceEEEEEEEcCCC-------CEEEEEEec
Q psy15927         11 EQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQN-------RVVVVANYS   79 (98)
Q Consensus        11 ~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~-------~~~~vC~Y~   79 (98)
                      ...+.++|+.|++|..+|+ +.. +.|   ..+..++|||||||++|++||||++.|...       ..++||+|+
T Consensus        66 ~~~~~~~v~~W~~e~~~y~-~~~-~~~---~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~~~~~~~~vC~Y~  136 (136)
T cd05559          66 PFDATKAVEDWNNEKLDYN-YNT-NTC---APNKMCGHYTQVVWANTFKIGCGSYFCETLEVLRWENATLLVCNYG  136 (136)
T ss_pred             CCCHHHHHHHHHHHHHhcC-CCC-CCC---CCCCcccchHHHHHhccCccceEEEECCCCCCCCcccCEEEEecCC
Confidence            3457899999999999999 876 444   346789999999999999999999999642       268999996

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd00168 SCP SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes

Probab=99.75  E-value=4.5e-18  Score=105.27  Aligned_cols=60  Identities=47%  Similarity=0.822  Sum_probs=53.1

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCcccccccCCCCcchhhHhhhcccceEEEEEEEcCCCCEEEEEEec
Q psy15927         13 AVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVVVANYS   79 (98)
Q Consensus        13 ~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~vC~Y~   79 (98)
                      .+..+++.|++|..+|+ +...      ..+..++|||||||++|++||||++.|..++.++||+|.
T Consensus        63 ~~~~~v~~W~~e~~~y~-~~~~------~~~~~~~h~~qmvw~~s~~vGca~~~~~~~~~~~vC~Y~  122 (122)
T cd00168          63 TGPAAVQAWYNEIKNYN-FGQP------GFSSGTGHYTQVVWKNTTKIGCGVAFCGSNSYYVVCNYG  122 (122)
T ss_pred             CHHHHHHHHHHHHHhCC-CCCC------CCCCCccchhhhhcccCCeeeeEEEEcCCCCEEEEEeCc
Confidence            68899999999999999 8742      445679999999999999999999999876789999995

This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. This family also includes CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Roles for CRISP, in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as

>cd05380 SCP_euk SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes

Probab=99.75  E-value=2.8e-18  Score=108.13  Aligned_cols=66  Identities=45%  Similarity=0.814  Sum_probs=56.2

Q ss_pred             chHHHHHHHHHHHHHhhcCCCCCCCcccccccCCCCcchhhHhhhcccceEEEEEEEcCC---CCEEEEEEec
Q psy15927         10 DEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQ---NRVVVVANYS   79 (98)
Q Consensus        10 ~~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~---~~~~~vC~Y~   79 (98)
                      ....+.++|+.|++|...|+ +...   +....+..++|||||||++|++||||++.|..   ...++||+|+
T Consensus        76 ~~~~~~~~v~~W~~e~~~~~-~~~~---~~~~~~~~~~hftq~vw~~t~~vGCa~~~~~~~~~~~~~~vC~Y~  144 (144)
T cd05380          76 VEELAEDAVNAWYNELKDYG-FGSN---PTNNFNSGIGHFTQMVWAKTTKVGCAVARCGKDGGNKTVVVCNYS  144 (144)
T ss_pred             HHHHHHHHHHHHHHHHHHcC-CCcC---cccccccchhHHHHHHHHhcCccceEEEEeecCCceEEEEEecCC
Confidence            46689999999999999999 7763   22256788999999999999999999999985   3479999995

This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>PF00188 CAP: Cysteine-rich secretory protein family; InterPro: IPR014044 The cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins (CAP) superfamily proteins are found in a wide range of organisms, including prokaryotes [] and non-vertebrate eukaryotes [], The nine subfamilies of the mammalian CAP superfamily include: the human glioma pathogenesis-related 1 (GLIPR1), Golgi associated pathogenesis related-1 (GAPR1) proteins, peptidase inhibitor 15 (PI15), peptidase inhibitor 16 (PI16), cysteine-rich secretory proteins (CRISPs), CRISP LCCL domain containing 1 (CRISPLD1), CRISP LCCL domain containing 2 (CRISPLD2), mannose receptor like and the R3H domain containing like proteins

Probab=99.23  E-value=2.8e-11  Score=72.27  Aligned_cols=58  Identities=33%  Similarity=0.679  Sum_probs=44.8

Q ss_pred             HHHHHHHhhcCCCCCCCcccccccCCCCcchhhHhhhcccceEEEEEEEcCCCC--EEEEEEe
Q psy15927         18 VDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNR--VVVVANY   78 (98)
Q Consensus        18 v~~W~~e~~~y~~~~~~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~--~~~vC~Y   78 (98)
                      ++.|+.+...+. +......  ......++||+||+|..+++||||++.|..+.  +++||+|
T Consensus        65 ~~~~~~~~~~~~-~~~~~~~--~~~~~~~~h~~~ll~~~~~~iGca~~~~~~~~~~~~~vc~y  124 (124)
T PF00188_consen   65 VENWYSESKNYN-FQNQSIF--NSWMNSPGHFTNLLWPNTTRIGCAVANCPNGKNNYYWVCNY  124 (124)
T ss_dssp             HHHHHGGGGGEE-TTCSTEE--SSTTSTCHHHHHHT-TT--EEEEEEEEETTSSSEEEEEEEE
T ss_pred             HHHHHhcccccc-cccchhh--hccCCchhhhhhhhcCCCCEEEEEEEEeCCCCeeEEEEEEC
Confidence            899999999988 5521111  14557789999999999999999999999876  8999998

Members are most often secreted and have an extracellular endocrine or paracrine function and are involved in processes including the regulation of extracellular matrix and branching morphogenesis, potentially as either proteases or protease inhibitors; in ion channel regulation in fertility; as tumour suppressor or pro-oncogenic genes in tissues including the prostate; and in cell-cell adhesion during fertilisation. The overall protein structural conservation within the CAP superfamily results in fundamentally similar functions for the CAP domain in all members, yet the diversity outside of this core region dramatically alters the target specificity and, thus, the biological consequences []. The Ca++-chelating function [] would fit with the various signalling processes (e.g. the CRISP proteins) that members of this family are involved in, and also the sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how Q91055 from SWISSPROT blocks the Ca++ transporting ryanodine receptors. This entry represents the CAP domain common to all members of the CAP superfamily. The CAP domain forms a unique 3 layer alpha-beta-alpha fold with some, though not all, of the structural elements found in proteases [].; PDB: 3U3N_C 3U3U_C 3U3L_C 1U53_A 1RC9_A 1SMB_A 3NT8_B 1QNX_A 1WVR_A 3Q2U_A ....

>cd05379 SCP_bacterial SCP_bacterial: SCP-like extracellular protein domain, as found in bacteria and archaea

Probab=96.47  E-value=0.0056  Score=36.76  Aligned_cols=33  Identities=24%  Similarity=0.424  Sum_probs=28.0

Q ss_pred             cchhhHhhhcccceEEEEEEEcCCCCEEEEEEe
Q psy15927         46 TGHFTQLIWKGTKAVGIGIAKGDQNRVVVVANY   78 (98)
Q Consensus        46 ~~hftqmvw~~t~~vGCa~~~c~~~~~~~vC~Y   78 (98)
                      .+|+.+|+|...+++|||++...++..++|..|
T Consensus        89 ~~H~~~ll~~~~~~~Gvg~~~~~~~~~y~~~~f  121 (122)
T cd05379          89 PGHRANILNPDYTEVGVGVAYGGDGGYYWVQVF  121 (122)
T ss_pred             HhHHHHHcCCCcceeeEEEEeCCCCCeEEEEec
Confidence            589999999999999999999876656666654

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Little is known about the biological roles of the bacterial and archaeal SCP domains.

>TIGR02909 spore_YkwD uncharacterized protein, YkwD family

Probab=96.45  E-value=0.0064  Score=37.73  Aligned_cols=33  Identities=15%  Similarity=0.350  Sum_probs=27.2

Q ss_pred             CcchhhHhhhcccceEEEEEEEcCCCCEEEEEE
Q psy15927         45 PTGHFTQLIWKGTKAVGIGIAKGDQNRVVVVAN   77 (98)
Q Consensus        45 ~~~hftqmvw~~t~~vGCa~~~c~~~~~~~vC~   77 (98)
                      ..+|+.+|+|...+++|||++.+.+++.+.|=.
T Consensus        92 S~gH~~nil~~~~~~~Gvg~~~~~~g~~y~~q~  124 (127)
T TIGR02909        92 SPGHRANILNPNYTEIGVGYVEGGSGGIYWTQM  124 (127)
T ss_pred             CHhHHHHHcCCCcCeEeEEEEeCCCCCeEEEEE
Confidence            469999999999999999999987765555433

Members of this protein family represent a subset of those belonging to Pfam family pfam00188 (SCP-like extracellular protein). Based on currently cuttoffs for this model, all member proteins are found in Bacteria capable of endospore formation. Members include a named but uncharacterized protein, YkwD of Bacillus subtilis. Only the C-terminal region is well-conserved and is included in the seed alignment for this model. Three members of this family have an N-terminal domain homologous to the spore coat assembly protein SafA.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	98
1smb_A	154	Crystal Structure Of Golgi-Associated Pr-1 Protein		1e-11
4aiw_A	154	Gapr-1 With Bound Inositol Hexakisphosphate Length		1e-11
2ddb_A	210	Crystal Structure Of Pseudecin From Pseudechis Porp		2e-07
2dda_A	211	Crystal Structure Of Pseudechetoxin From Pseudechis		3e-07
2vzn_A	218	Crystal Structure Of The Major Allergen From Fire A		1e-05
1qnx_A	209	Ves V 5, An Allergen From Vespula Vulgaris Venom Le		1e-05
3q2r_A	205	Crystal Structure Of Sglipr1 Soaked With Zinc Chlor		8e-05
1u53_A	196	Novel X-Ray Structure Of Na-Asp-2, A Pr-1 Protein F		1e-04
1rc9_A	221	Crystal Structure Of Stecrisp, A Member Of Crisp Fa		2e-04

>pdb|1SMB|A Chain A, Crystal Structure Of Golgi-Associated Pr-1 Protein Length = 154

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 11  EQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQN 70
           +Q  +   D WY+EIK+Y         Q+    S TGHFT ++WK TK +G+G A     
Sbjct: 73  DQTGKEVADRWYSEIKNY-------NFQQPGFTSGTGHFTAMVWKNTKKMGVGKASASDG 125
Query: 71  RVVVVANYSPAGNVVR--YFNENV 92
              VVA Y PAGNVV   +F ENV
Sbjct: 126 SSFVVARYFPAGNVVNEGFFEENV 149

>pdb|4AIW|A Chain A, Gapr-1 With Bound Inositol Hexakisphosphate Length = 154

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 11  EQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQN 70
           +Q  +   D WY+EIK+Y         Q+    S TGHFT ++WK TK +G+G A     
Sbjct: 73  DQTGKEVADRWYSEIKNY-------NFQQPGFTSGTGHFTAMVWKNTKKMGVGKASASDG 125
Query: 71  RVVVVANYSPAGNVVR--YFNENV 92
              VVA Y PAGNVV   +F ENV
Sbjct: 126 SSFVVARYFPAGNVVNEGFFEENV 149

>pdb|2DDB|A Chain A, Crystal Structure Of Pseudecin From Pseudechis Porphyriacus Length = 210

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 18  VDSWYNEIKDYKL-FGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVVVA 76
           V +WY+EIK++    G +P       GS  GH+TQ++W  +  +G   AK   ++ + V 
Sbjct: 81  VQAWYDEIKNFVYGIGAKPP------GSVIGHYTQVVWYKSHLIGCASAKCSSSKYLYVC 134
Query: 77  NYSPAGNV 84
            Y PAGN+
Sbjct: 135 QYCPAGNI 142

>pdb|2DDA|A Chain A, Crystal Structure Of Pseudechetoxin From Pseudechis Australis Length = 211

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 18  VDSWYNEIKDYKL-FGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVVVA 76
           V +WY+EIK++    G +P       GS  GH+TQ++W  +  +G   AK   ++ + V 
Sbjct: 82  VQAWYDEIKNFVYGIGAKPP------GSVIGHYTQVVWYKSYLIGCASAKCSSSKYLYVC 135
Query: 77  NYSPAGNV 84
            Y PAGN+
Sbjct: 136 QYCPAGNI 143

>pdb|2VZN|A Chain A, Crystal Structure Of The Major Allergen From Fire Ant Venom, Sol I 3 Length = 218

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 21  WYNEIKDY--KLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIG--IAKGDQN--RVVV 74
           WYNE+KD+  +     P+   ++     GH+TQ++W  T  +G G  + K   N  +  +
Sbjct: 135 WYNEVKDFDNRWISSFPSDDNILMK--VGHYTQIVWAKTTKIGCGRIMFKEPDNWTKHYL 192
Query: 75  VANYSPAGNVV 85
           V NY PAGNV+
Sbjct: 193 VCNYGPAGNVL 203

>pdb|1QNX|A Chain A, Ves V 5, An Allergen From Vespula Vulgaris Venom Length = 209

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 13/72 (18%)
Query: 18  VDSWYNEIKDYKLFGREPTMQELMSGS---PTGHFTQLIWKGTKAVGIGIAKGDQ---NR 71
           V  W +E+KDY         ++  SG+    TGH+TQ++W  TK VG G  K  Q   ++
Sbjct: 135 VKMWEDEVKDY-------NPKKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHK 187
Query: 72  VVVVANYSPAGN 83
             +V NY P+GN
Sbjct: 188 HYLVCNYGPSGN 199

>pdb|3Q2R|A Chain A, Crystal Structure Of Sglipr1 Soaked With Zinc Chloride Length = 205

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 18/88 (20%)
Query: 4   GTSPITDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIG 63
           G+ PI    +V +A+ +WY+EI+DY    R       +     GH+TQ++W  +  VG  
Sbjct: 88  GSVPIF---SVSSAITNWYDEIQDYDFKTR-------ICKKVCGHYTQVVWADSYKVGCA 137
Query: 64  IA--------KGDQNRVVVVANYSPAGN 83
           +             N    + NY P GN
Sbjct: 138 VQFCPKVSGFDALSNGAHFICNYGPGGN 165

>pdb|1U53|A Chain A, Novel X-Ray Structure Of Na-Asp-2, A Pr-1 Protein From The Nematode Parasite Necator Americanus And A Vaccine Antigen For Human Hookworm Infection Length = 196

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 6   SPITDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIA 65
           S +   +A + A  +W+ E+ + K  G+   +   +     GH+TQ++W+ T  +G  + 
Sbjct: 93  SGMDKAKAAEQASKAWFGELAE-KGVGQNLKLTGGLFSRGVGHYTQMVWQETVKLGCYV- 150
Query: 66  KGDQNRVVVVANYSPAGNVV 85
           +   N   VV  Y PAGN++
Sbjct: 151 EACSNMCYVVCQYGPAGNMM 170

>pdb|1RC9|A Chain A, Crystal Structure Of Stecrisp, A Member Of Crisp Family From Trimeresurus Stejnegeri Refined At 1.6 Angstroms Resolution: Structual Relationship Of The Two Domains Length = 221

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 18  VDSWYNEIKDYKL-FGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQN--RVVV 74
           + +W++E KD+K   G +P        + TGH+TQ++W  +  +G   A    +      
Sbjct: 90  IHAWHDEYKDFKYGVGADP------PNAVTGHYTQIVWYKSYRIGCAAAYCPSSPYSYFF 143
Query: 75  VANYSPAGNVV 85
           V  Y PAGN +
Sbjct: 144 VCQYCPAGNFI 154

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	98
4aiw_A	154	Golgi-associated plant pathogenesis-related prote;	3e-26
1cfe_A	135	Pathogenesis-related protein P14A; PR-1 proteins,	2e-24
1u53_A	196	Secreted protein Asp-2; antibiotic; 1.56A {Necator	6e-23
2vzn_A	218	Venom allergen 3; major FIRE ANT allergen, SOL I 3	1e-20
2ddb_A	210	Pseudecin, channel blocker; crisp, snake venom, CN	2e-20
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	2e-20
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	2e-16
1xta_A	221	Natrin 1; crisp, serine protease, ION channel bloc	3e-20
1qnx_A	209	VES V 5, antigen 5; allergen, vespid venom; 1.90A	5e-20
3q2u_A	205	Glioma pathogenesis-related protein 1; crisp, memb	5e-18
3u3l_C	233	Tablysin 15; CAP domain, alphavbeta3 integrin, sal	1e-12
3s6s_A	206	AC-Asp-7; pathogenesis-related protein, SCP/TAPS,	2e-05

>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A* Length = 154

 Score = 93.5 bits (233), Expect = 3e-26
 Identities = 36/81 (44%), Positives = 45/81 (55%), Gaps = 9/81 (11%)

Query: 15  QNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVV 74
           +   D WY+EIK+Y  F + P        S TGHFT ++WK TK +G+G A        V
Sbjct: 77  KEVADRWYSEIKNYN-FQQ-PGFT-----SGTGHFTAMVWKNTKKMGVGKASASDGSSFV 129

Query: 75  VANYSPAGNVV--RYFNENVP 93
           VA Y PAGNVV   +F ENV 
Sbjct: 130 VARYFPAGNVVNEGFFEENVL 150

>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1 Length = 135

 Score = 88.4 bits (220), Expect = 2e-24
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 5/72 (6%)

Query: 14  VQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVV 73
            + AV  W +E   Y  +     +     G    H+TQ++W+ +  +G G A+ +     
Sbjct: 64  GRAAVQLWVSERPSYN-YATNQCV----GGKKCRHYTQVVWRNSVRLGCGRARCNNGWWF 118

Query: 74  VVANYSPAGNVV 85
           +  NY P GN +
Sbjct: 119 ISCNYDPVGNWI 130

>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus} Length = 196

 Score = 86.4 bits (214), Expect = 6e-23
 Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 2/83 (2%)

Query: 3   GGTSPITDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGI 62
              S +   +A + A  +W+ E+ +    G+   +   +     GH+TQ++W+ T  +G 
Sbjct: 90  SSDSGMDKAKAAEQASKAWFGELAEKG-VGQNLKLTGGLFSRGVGHYTQMVWQETVKLGC 148

Query: 63  GIAKGDQNRVVVVANYSPAGNVV 85
            +     N   VV  Y PAGN++
Sbjct: 149 YVEACS-NMCYVVCQYGPAGNMM 170

>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta} Length = 218

 Score = 80.7 bits (199), Expect = 1e-20
 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 4   GTSPITDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIG 63
            +S   ++      +  WYNE+KD+          +       GH+TQ++W  T  +G G
Sbjct: 118 TSSSGKNKSTPNEMILLWYNEVKDFDNRWISSFPSDDNILMKVGHYTQIVWAKTTKIGCG 177

Query: 64  IAK----GDQNRVVVVANYSPAGNVV 85
                   +  +  +V NY PAGNV+
Sbjct: 178 RIMFKEPDNWTKHYLVCNYGPAGNVL 203

>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A Length = 210

 Score = 80.3 bits (198), Expect = 2e-20
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 5/77 (6%)

Query: 9   TDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGD 68
           +        V +WY+EIK++        +     GS  GH+TQ++W  +  +G   AK  
Sbjct: 72  SQPFPWSGVVQAWYDEIKNFV-----YGIGAKPPGSVIGHYTQVVWYKSHLIGCASAKCS 126

Query: 69  QNRVVVVANYSPAGNVV 85
            ++ + V  Y PAGN+ 
Sbjct: 127 SSKYLYVCQYCPAGNIR 143

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus} Length = 424

 Score = 82.8 bits (204), Expect = 2e-20
 Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 3/85 (3%)

Query: 3   GGTSPITDEQAVQNAVDSWYNEIKDYKLFGRE--PTMQELMSGSPTGHFTQLIWKGTKAV 60
                    +A + A   W+NE+K+Y +       T          GH+TQ+ W  T  +
Sbjct: 311 TSVLKFDKNKAAKQASQLWWNELKEYGVGPSNVLTTALWNRPNMQIGHYTQMAWDTTYKL 370

Query: 61  GIGIAKGDQNRVVVVANYSPAGNVV 85
           G  +   + +    V  Y P GN +
Sbjct: 371 GCAVVFCN-DFTFGVCQYGPGGNYM 394

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus} Length = 424

 Score = 71.7 bits (175), Expect = 2e-16
 Identities = 9/92 (9%), Positives = 25/92 (27%), Gaps = 6/92 (6%)

Query: 3   GGTSPITDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGI 62
                      ++  +  W++  K   +           +G     F+ +++  T  +G 
Sbjct: 108 SSGGYPDPSVKIEPTLSGWWSGAKKNGVGPDNK-----YTGGGLFAFSNMVYSETTKLGC 162

Query: 63  GIAKGDQNRVVVVANYSPAGNVVRYFNENVPN 94
                   ++ V   Y+  G +          
Sbjct: 163 AYKVCG-TKLAVSCIYNGVGYITNQPMWETGQ 193

>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A Length = 221

 Score = 79.9 bits (197), Expect = 3e-20
 Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 7/79 (8%)

Query: 9   TDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAK-- 66
           ++ +     +  W++E K++        +     GS TGH+TQ++W  T   G  ++   
Sbjct: 81  SNARTWTEIIHLWHDEYKNFV-----YGVGASPPGSVTGHYTQIVWYQTYRAGCAVSYCP 135

Query: 67  GDQNRVVVVANYSPAGNVV 85
                   V  Y P+GN  
Sbjct: 136 SSAWSYFYVCQYCPSGNFQ 154

>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1 Length = 209

 Score = 79.1 bits (195), Expect = 5e-20
 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 7/85 (8%)

Query: 4   GTSPITDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIG 63
             S           V  W +E+KDY    ++ +         TGH+TQ++W  TK VG G
Sbjct: 121 TGSTAAKYDDPVKLVKMWEDEVKDYN-PKKKFSGN---DFLKTGHYTQMVWANTKEVGCG 176

Query: 64  IA---KGDQNRVVVVANYSPAGNVV 85
                +   ++  +V NY P+GN  
Sbjct: 177 SIKYIQEKWHKHYLVCNYGPSGNFK 201

>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A Length = 205

 Score = 73.8 bits (181), Expect = 5e-18
 Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 15/84 (17%)

Query: 9   TDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAK-- 66
               +V +A+ +WY+EI+DY  F               GH+TQ++W  +  VG  +    
Sbjct: 90  VPIFSVSSAITNWYDEIQDYD-FKTRI------CKKVCGHYTQVVWADSYKVGCAVQFCP 142

Query: 67  ------GDQNRVVVVANYSPAGNV 84
                    N    + NY P GN 
Sbjct: 143 KVSGFDALSNGAHFICNYGPGGNY 166

>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C* Length = 233

 Score = 59.7 bits (144), Expect = 1e-12
 Identities = 14/85 (16%), Positives = 27/85 (31%), Gaps = 5/85 (5%)

Query: 4   GTSPITDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIG 63
           G      ++ + +AV   + +  +          +E             I     AVG G
Sbjct: 113 GDKLPRIKELIDDAVKKGHLQKHNIT-REIIENYRENGPNGDVKELALAISDRVTAVGCG 171

Query: 64  IA---KGDQNRVVVVANYSPAGNVV 85
           +     G + R ++  N+S   N  
Sbjct: 172 LTTWEDGAKARALLTCNFSS-QNTR 195

>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A Length = 206

 Score = 40.4 bits (94), Expect = 2e-05
 Identities = 8/86 (9%), Positives = 20/86 (23%), Gaps = 26/86 (30%)

Query: 3   GGTSPITDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGI 62
            G    +   A++  ++++  +                          Q+++      G 
Sbjct: 81  SGDYEGSAISALKEILETFSADK---------------------NSMRQVVYPKATRFGC 119

Query: 63  GIA-----KGDQNRVVVVANYSPAGN 83
                   K    R+  V  Y     
Sbjct: 120 SGRLRRNKKTGMRRMDWVCVYDKKPK 145

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	98
4aiw_A	154	Golgi-associated plant pathogenesis-related prote;	99.97
1u53_A	196	Secreted protein Asp-2; antibiotic; 1.56A {Necator	99.95
1cfe_A	135	Pathogenesis-related protein P14A; PR-1 proteins,	99.94
2ddb_A	210	Pseudecin, channel blocker; crisp, snake venom, CN	99.93
3u3l_C	233	Tablysin 15; CAP domain, alphavbeta3 integrin, sal	99.92
1xta_A	221	Natrin 1; crisp, serine protease, ION channel bloc	99.92
2vzn_A	218	Venom allergen 3; major FIRE ANT allergen, SOL I 3	99.91
3q2u_A	205	Glioma pathogenesis-related protein 1; crisp, memb	99.91
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	99.91
1qnx_A	209	VES V 5, antigen 5; allergen, vespid venom; 1.90A	99.89
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	99.88
3s6s_A	206	AC-Asp-7; pathogenesis-related protein, SCP/TAPS,	99.83

>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A*

Probab=99.97  E-value=9e-32  Score=172.81  Aligned_cols=79  Identities=47%  Similarity=0.766  Sum_probs=70.5

Q ss_pred             HHHHHHHHHHHHHhhcCCCCCCCcccccccCCCCcchhhHhhhcccceEEEEEEEcCCCCEEEEEEecCCCCCccc--cc
Q psy15927         12 QAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVVVANYSPAGNVVRY--FN   89 (98)
Q Consensus        12 ~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~vC~Y~p~GN~~g~--~~   89 (98)
                      .+..++|+.||+|.++|+ +..+ .     ....+||||||||++|++||||++.|.++..++||+|+|+||+.|+  |.
T Consensus        74 ~~~~~~v~~W~~E~~~y~-~~~~-~-----~~~~~gHfTQ~VW~~t~~vGCg~a~c~~~~~~vVC~Y~P~GN~~g~~~y~  146 (154)
T 4aiw_A           74 QTGKEVADRWYSEIKNYN-FQQP-G-----FTSGTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFFE  146 (154)
T ss_dssp             CCHHHHHHHHHGGGGGCC-TTSC-S-----CCTTTHHHHHHHCTTCCEEEEEEEECTTSCEEEEEEEESCCCCCSTTHHH
T ss_pred             CCHHHHHHHHHHHhhhcc-cCCC-C-----cCCCcCCeeeeehhhhceeeeEEEEcCCCCEEEEEEEeCCCccCCccchH
Confidence            356789999999999999 8774 3     3456999999999999999999999998889999999999999875  99


Q ss_pred             cCCCCCCC
Q psy15927         90 ENVPNVVK   97 (98)
Q Consensus        90 ~nv~~p~~   97 (98)
                      +||+||++
T Consensus       147 ~NV~pPkk  154 (154)
T 4aiw_A          147 ENVLPPKK  154 (154)
T ss_dssp             HHSCCCCC
T ss_pred             HhCCCCCC
Confidence            99999975

>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus}

Probab=99.95  E-value=9e-28  Score=158.90  Aligned_cols=87  Identities=23%  Similarity=0.428  Sum_probs=76.2

Q ss_pred             chHHHHHHHHHHHHHhhcCCCCCCCcccccccCCCCcchhhHhhhcccceEEEEEEEcCCCCEEEEEEecCCCCCccccc
Q psy15927         10 DEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVVVANYSPAGNVVRYFN   89 (98)
Q Consensus        10 ~~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~vC~Y~p~GN~~g~~~   89 (98)
                      .+..+.++|+.||+|..+|+ +...+.|+....+..+||||||||++|++||||++.|.. .+++||+|+|+||+.|+++
T Consensus        97 ~~~~~~~~v~~W~~E~~~y~-~~~~~~~~~~~~~~~~ghfTQ~VW~~t~~vGCa~~~c~~-~~~~VC~Y~p~GN~~g~~~  174 (196)
T 1u53_A           97 KAKAAEQASKAWFGELAEKG-VGQNLKLTGGLFSRGVGHYTQMVWQETVKLGCYVEACSN-MCYVVCQYGPAGNMMGKDI  174 (196)
T ss_dssp             HHHHHHHHHHHHHTHHHHHC-CCSCCBCCHHHHTTTCHHHHHHTCTTCCEEEEEEEECSS-CEEEEEEEESCCCCTTSBS
T ss_pred             HHHHHHHHHHHHHHHHHHcC-CCcccccCccccCccccchheeeecccCEEeeEEEEeCC-CEEEEEEeCCCCCCCCCcC
Confidence            35678999999999999999 877555543345678999999999999999999999976 5899999999999999999


Q ss_pred             cCCCCCCCC
Q psy15927         90 ENVPNVVKK   98 (98)
Q Consensus        90 ~nv~~p~~~   98 (98)
                      |++++|.++
T Consensus       175 Y~~G~pcs~  183 (196)
T 1u53_A          175 YEKGEPCSK  183 (196)
T ss_dssp             SCBSSTTTT
T ss_pred             CccCCCCCC
Confidence            999999875

>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1

Probab=99.94  E-value=2.1e-27  Score=149.40  Aligned_cols=74  Identities=24%  Similarity=0.495  Sum_probs=65.9

Q ss_pred             HHHHHHHHHHHHHhhcCCCCCCCcccccccCCCCcchhhHhhhcccceEEEEEEEcCCCCEEEEEEecCCCCCcccccc
Q psy15927         12 QAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVVVANYSPAGNVVRYFNE   90 (98)
Q Consensus        12 ~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~vC~Y~p~GN~~g~~~~   90 (98)
                      .++.++|+.|++|.++|+ +.. +.|   ..+..+||||||||++|++||||++.|..+.+++||+|+|+||+.|+++|
T Consensus        62 ~~~~~~v~~W~~E~~~y~-~~~-~~~---~~~~~~gHfTQ~vW~~t~~vGCa~~~c~~~~~~~VC~Y~p~GN~~g~~pY  135 (135)
T 1cfe_A           62 FTGRAAVQLWVSERPSYN-YAT-NQC---VGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQRPY  135 (135)
T ss_dssp             CCHHHHHHHHHTTGGGEE-GGG-TEE---CSSSCCSSHHHHHCTTCCEEEEEEEECTTSSEEEEEECSSCCSCTTSCCC
T ss_pred             CCHHHHHHHHHhHHhhCC-CCC-CCc---CCCCcccceeeeEEccCcEEeEEEEEeCCCCEEEEEEEeCCCCCCCCCCC
Confidence            468899999999999999 877 344   45678999999999999999999999987778999999999999999775

>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A

Probab=99.93  E-value=5.3e-26  Score=152.26  Aligned_cols=81  Identities=28%  Similarity=0.543  Sum_probs=71.5

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCcccccccCCCCcchhhHhhhcccceEEEEEEEcCCCCEEEEEEecCCCCCccc--ccc
Q psy15927         13 AVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVVVANYSPAGNVVRY--FNE   90 (98)
Q Consensus        13 ~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~vC~Y~p~GN~~g~--~~~   90 (98)
                      .+.++|+.||+|.++|+ +... .+   ..+..+||||||||++|++||||++.|..+.+++||+|+|+||+.|+  .+|
T Consensus        76 ~~~~av~~W~~E~~~y~-~~~~-~~---~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~VC~Y~P~GN~~g~~~~pY  150 (210)
T 2ddb_A           76 PWSGVVQAWYDEIKNFV-YGIG-AK---PPGSVIGHYTQVVWYKSHLIGCASAKCSSSKYLYVCQYCPAGNIRGSIATPY  150 (210)
T ss_dssp             CHHHHHHHHHGGGGGEE-TTTE-ES---STTSCCHHHHHHTCTTCCEEEEEEEEEETTEEEEEEEEESCSSSTTCTTCSS
T ss_pred             CHHHHHHHHHHHhhhCC-CCCC-CC---CCCCcccchhhhhhhhccEeeEEEEEcCCCCEEEEEEeeCCCCCCCCccCCC
Confidence            36799999999999999 8763 32   45678999999999999999999999987668999999999999999  899


Q ss_pred             CCCCCCCC
Q psy15927         91 NVPNVVKK   98 (98)
Q Consensus        91 nv~~p~~~   98 (98)
                      ..++|.++
T Consensus       151 ~~G~pcs~  158 (210)
T 2ddb_A          151 KSGPPCAD  158 (210)
T ss_dssp             CBSSTTTT
T ss_pred             CcCcCccc
Confidence            99999864

>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C*

Probab=99.92  E-value=5.4e-26  Score=153.92  Aligned_cols=88  Identities=14%  Similarity=0.080  Sum_probs=72.7

Q ss_pred             CchHHHHHHHHHHHHHhhcCCCCCCCcccccccCCCCcchhhHhhhcccceEEEEEEEcCCCC---EEEEEEecCCCCCc
Q psy15927          9 TDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNR---VVVVANYSPAGNVV   85 (98)
Q Consensus         9 ~~~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~---~~~vC~Y~p~GN~~   85 (98)
                      +....+.++|+.||+|.++|+ +...+.++....+..+||||||||++|++||||++.|..+.   +++||+|+| ||++
T Consensus       118 ~~~~~~~~av~~W~~E~~~y~-~~~~~~~~~~~~~~~~gHfTQmVW~~t~~vGCa~~~c~~~~~~~~~~VC~Y~p-GN~~  195 (233)
T 3u3l_C          118 RIKELIDDAVKKGHLQKHNIT-REIIENYRENGPNGDVKELALAISDRVTAVGCGLTTWEDGAKARALLTCNFSS-QNTR  195 (233)
T ss_dssp             CHHHHHHHHHHHHHGGGGTCC-HHHHHSCCSCC--CCCHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEESC-CCCT
T ss_pred             CHHHHHHHHHHHHHHHHhhhC-HHHHhcCCCcccccchhhhHHHhhhcCCeeeeEEEEEEcCCeeEEEEEEECCC-CCCC
Confidence            445678999999999999998 65433343334567899999999999999999999997643   699999998 9999


Q ss_pred             cccccCCC-CCCCC
Q psy15927         86 RYFNENVP-NVVKK   98 (98)
Q Consensus        86 g~~~~nv~-~p~~~   98 (98)
                      |+.+|..+ +|.++
T Consensus       196 g~~~Y~~G~~pcs~  209 (233)
T 3u3l_C          196 GRPVYKIGNSPGEK  209 (233)
T ss_dssp             TSCSSCBCSSTTTT
T ss_pred             CCceeeCCCCcccc
Confidence            99999999 89874

>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A

Probab=99.92  E-value=2.3e-25  Score=150.14  Aligned_cols=81  Identities=23%  Similarity=0.429  Sum_probs=71.1

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCcccccccCCCCcchhhHhhhcccceEEEEEEEcCCC--CEEEEEEecCCCCCccc--c
Q psy15927         13 AVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQN--RVVVVANYSPAGNVVRY--F   88 (98)
Q Consensus        13 ~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~--~~~~vC~Y~p~GN~~g~--~   88 (98)
                      .+.++|+.||+|.++|+ +... .+   ..+..+||||||||++|++||||++.|..+  .+++||+|+|+||+.|+  .
T Consensus        85 ~~~~av~~W~~E~~~y~-~~~~-~~---~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~VC~Y~P~GN~~g~~~~  159 (221)
T 1xta_A           85 TWTEIIHLWHDEYKNFV-YGVG-AS---PPGSVTGHYTQIVWYQTYRAGCAVSYCPSSAWSYFYVCQYCPSGNFQGKTAT  159 (221)
T ss_dssp             CHHHHHHHHHGGGGGEE-TTTE-ES---STTCCCHHHHHHTCTTCCEEEEEEEECTTSSSSEEEEEEEESCCCCTTTTTC
T ss_pred             CHHHHHHHHHHHHHhcC-CCCC-CC---CCCCchhHHHHHHHHhcCEeeEEEEEcCCCCccEEEEEEEeCCcCCCCCcCC
Confidence            36899999999999999 8763 32   456789999999999999999999999864  48999999999999999  7


Q ss_pred             ccCCCCCCCC
Q psy15927         89 NENVPNVVKK   98 (98)
Q Consensus        89 ~~nv~~p~~~   98 (98)
                      +|..++|.++
T Consensus       160 pY~~G~pcs~  169 (221)
T 1xta_A          160 PYKLGPPCGD  169 (221)
T ss_dssp             SSCBSSTTTT
T ss_pred             CcccCCcccc
Confidence            9999999864

>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta}

Probab=99.91  E-value=1.4e-25  Score=150.73  Aligned_cols=82  Identities=27%  Similarity=0.433  Sum_probs=66.3

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCccccccc-CCCCcchhhHhhhcccceEEEEEEEcCC-CC---EEEEEEecCCCCCccc
Q psy15927         13 AVQNAVDSWYNEIKDYKLFGREPTMQELM-SGSPTGHFTQLIWKGTKAVGIGIAKGDQ-NR---VVVVANYSPAGNVVRY   87 (98)
Q Consensus        13 ~~~~~v~~W~~e~~~y~~~~~~~~~~~~~-~~~~~~hftqmvw~~t~~vGCa~~~c~~-~~---~~~vC~Y~p~GN~~g~   87 (98)
                      .+.++|+.||+|..+|+ +.....++... .+..+||||||||++|++||||++.|.. +.   +++||+|+|+||+.|+
T Consensus       127 ~~~~av~~W~~E~~~y~-~~~~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~~vVC~Y~P~GN~~g~  205 (218)
T 2vzn_A          127 TPNEMILLWYNEVKDFD-NRWISSFPSDDNILMKVGHYTQIVWAKTTKIGCGRIMFKEPDNWTKHYLVCNYGPAGNVLGA  205 (218)
T ss_dssp             CHHHHHHHHHGGGGGCC-GGGSSSCCCCHHHHHHHHHHHHHTCTTCCEEEEEEEEEECTTSCEEEEEEEEEESCCCCTTS
T ss_pred             hHHHHHHHHHHHHHhcC-cccccCCCCCcccCCCcchHHHHHHHhcCEEeEEEEEEeCCCCeEEEEEEEEECCCCCCCCC
Confidence            34589999999999999 76432221100 2356899999999999999999999976 32   6999999999999999


Q ss_pred             cccCCCCC
Q psy15927         88 FNENVPNV   95 (98)
Q Consensus        88 ~~~nv~~p   95 (98)
                      ++|+|++-
T Consensus       206 ~~y~~~~~  213 (218)
T 2vzn_A          206 PIYEIKKH  213 (218)
T ss_dssp             CSSCBCCC
T ss_pred             cccccCcc
Confidence            99999864

>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A

Probab=99.91  E-value=5.5e-25  Score=146.38  Aligned_cols=79  Identities=28%  Similarity=0.563  Sum_probs=68.8

Q ss_pred             HHHHHHHHHHHHHhhcCCCCCCCcccccccCCCCcchhhHhhhcccceEEEEEEEcCC--------CCEEEEEEecCCCC
Q psy15927         12 QAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQ--------NRVVVVANYSPAGN   83 (98)
Q Consensus        12 ~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~--------~~~~~vC~Y~p~GN   83 (98)
                      ..+.++|+.||+|.++|+ +... .|     ...+||||||||+.|++||||++.|..        ..+++||+|+|+||
T Consensus        93 ~~~~~~v~~W~~E~~~y~-~~~~-~~-----~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~g~~~~~~~~~~VC~Y~P~GN  165 (205)
T 3q2u_A           93 FSVSSAITNWYDEIQDYD-FKTR-IC-----KKVCGHYTQVVWADSYKVGCAVQFCPKVSGFDALSNGAHFICNYGPGGN  165 (205)
T ss_dssp             CCHHHHHHHHHGGGGGEE-TTTT-EE-----SSCCHHHHHHTCTTCCEEEEEEEEESCCBTCSSCCSEEEEEEEEESCCC
T ss_pred             CCHHHHHHHHHhHHHhcC-CCCC-Cc-----cchhHHHHHHHhhcccEeeeEEEEcCCCcCcccccccEEEEEEEECCCC
Confidence            357899999999999999 8773 32     468999999999999999999999975        23689999999999


Q ss_pred             CccccccCCCCCCCC
Q psy15927         84 VVRYFNENVPNVVKK   98 (98)
Q Consensus        84 ~~g~~~~nv~~p~~~   98 (98)
                      + ++.+|..++|+++
T Consensus       166 ~-~~~pY~~G~pcS~  179 (205)
T 3q2u_A          166 Y-PTWPYKRGATCSA  179 (205)
T ss_dssp             C-SSCSSCBSSTTTT
T ss_pred             c-CCCCCCcCccccc
Confidence            8 8889999999875

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}

Probab=99.91  E-value=4.6e-24  Score=154.47  Aligned_cols=87  Identities=23%  Similarity=0.445  Sum_probs=74.6

Q ss_pred             chHHHHHHHHHHHHHhhcCCCCCCCccccc---ccCCCCcchhhHhhhcccceEEEEEEEcCCCCEEEEEEecCCCCCcc
Q psy15927         10 DEQAVQNAVDSWYNEIKDYKLFGREPTMQE---LMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVVVANYSPAGNVVR   86 (98)
Q Consensus        10 ~~~~~~~~v~~W~~e~~~y~~~~~~~~~~~---~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~vC~Y~p~GN~~g   86 (98)
                      ....+.++|+.||+|.++|+ +...+.+..   ...+..+||||||||++|++||||++.|..+ .++||+|+|+||+.|
T Consensus       318 ~~~~~~~~v~~W~~E~~~y~-~~~~~~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~-~~~VC~Y~p~GN~~g  395 (424)
T 3nt8_A          318 KNKAAKQASQLWWNELKEYG-VGPSNVLTTALWNRPNMQIGHYTQMAWDTTYKLGCAVVFCNDF-TFGVCQYGPGGNYMG  395 (424)
T ss_dssp             HHHHHHHHHHHHHTHHHHTC-CCTTCBCCHHHHTCTTCCCHHHHHHHCTTCCEEEEEEEECSSS-EEEEEEEESCCCCTT
T ss_pred             hHHHHHHHHHHHHHHHHhcC-CCCCcccccccccCCCCcccchHHHhhhhcceeeeEEEEeCCC-eEEEEEecCCCCcCC
Confidence            34678999999999999999 876443321   1245789999999999999999999999875 899999999999999


Q ss_pred             ccccCCCCCCCC
Q psy15927         87 YFNENVPNVVKK   98 (98)
Q Consensus        87 ~~~~nv~~p~~~   98 (98)
                      +++|..++|+++
T Consensus       396 ~~~Y~~G~pcs~  407 (424)
T 3nt8_A          396 HVIYTMGQPCSQ  407 (424)
T ss_dssp             SBSSCBSSTTTT
T ss_pred             CCCCCCCccccc
Confidence            999999999874

>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1

Probab=99.89  E-value=4.6e-24  Score=142.44  Aligned_cols=76  Identities=33%  Similarity=0.494  Sum_probs=63.6

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCcccccccCCCCcchhhHhhhcccceEEEEEEEcCCCC---EEEEEEecCCCCCccccc
Q psy15927         13 AVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNR---VVVVANYSPAGNVVRYFN   89 (98)
Q Consensus        13 ~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~---~~~vC~Y~p~GN~~g~~~   89 (98)
                      .+.++|+.||+|..+|+ +...  ++. ..+..+||||||||++|++||||++.|..+.   +++||+|+|+||+.|+.+
T Consensus       130 ~~~~av~~W~~E~~~y~-~~~~--~~~-~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~~VC~Y~P~GN~~g~~~  205 (209)
T 1qnx_A          130 DPVKLVKMWEDEVKDYN-PKKK--FSG-NDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGNFKNEEL  205 (209)
T ss_dssp             CHHHHHHHHHGGGGGCC-TTSC--GGG-SCHHHHHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEEESCCCCTTSCS
T ss_pred             cHHHHHHHHHHhhhhcC-CccC--CCC-CCCCcccchhhhhhhcCcEeeeEEEEEeCCCceeEEEEEEeCCCCCCCCCCC
Confidence            46789999999999999 8752  221 2235799999999999999999999997643   589999999999999988


Q ss_pred             cCC
Q psy15927         90 ENV   92 (98)
Q Consensus        90 ~nv   92 (98)
                      |.+
T Consensus       206 Y~~  208 (209)
T 1qnx_A          206 YQT  208 (209)
T ss_dssp             SCB
T ss_pred             Cee
Confidence            854

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}

Probab=99.88  E-value=9.9e-23  Score=147.51  Aligned_cols=82  Identities=12%  Similarity=0.258  Sum_probs=72.6

Q ss_pred             CchHHHHHHHHHHHHHhhcCCCCCCCcccccccCCCCcchhhHhhhcccceEEEEEEEcCCCCEEEEEEecCCCCCcccc
Q psy15927          9 TDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVVVANYSPAGNVVRYF   88 (98)
Q Consensus         9 ~~~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~vC~Y~p~GN~~g~~   88 (98)
                      +....+.++|+.||+|.++|+ +...+.+    .+..++|||||||++|++||||++.|.. .+++||+|+|+||+.|+.
T Consensus       114 ~~~~~~~~~v~~W~~E~~~y~-~~~~~~~----~~~~~ghfTqmvw~~t~~vGCa~~~c~~-~~~~VC~Y~p~GN~~g~~  187 (424)
T 3nt8_A          114 DPSVKIEPTLSGWWSGAKKNG-VGPDNKY----TGGGLFAFSNMVYSETTKLGCAYKVCGT-KLAVSCIYNGVGYITNQP  187 (424)
T ss_dssp             CGGGGHHHHHHHHHTHHHHHC-CCTTCBC----CCTTCHHHHHHHCTTCCEEEEEEEEETT-EEEEEEEESSCCCSTTCB
T ss_pred             CHHHHHHHHHHHHHHHHHHcC-CcccccC----CCcchHHHHHHHHHhcCeeceEEEEeCC-cEEEEEEECCCCCccccc
Confidence            455668999999999999999 8764443    3567899999999999999999999987 589999999999999999


Q ss_pred             ccCCCCCC
Q psy15927         89 NENVPNVV   96 (98)
Q Consensus        89 ~~nv~~p~   96 (98)
                      +|..++|.
T Consensus       188 ~Y~~G~~c  195 (424)
T 3nt8_A          188 MWETGQAC  195 (424)
T ss_dssp             SSEESCCB
T ss_pred             ccccCCCC
Confidence            99999998

>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A

Probab=99.83  E-value=8e-21  Score=126.90  Aligned_cols=63  Identities=8%  Similarity=-0.004  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCcccccccCCCCcchhhHhhhcccceEEEEEEEcC----CC-CEEEEEEecCCCCCccc
Q psy15927         13 AVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGD----QN-RVVVVANYSPAGNVVRY   87 (98)
Q Consensus        13 ~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~----~~-~~~~vC~Y~p~GN~~g~   87 (98)
                      .+.++|+.||+|                    .++|||||||++|++||||++.|.    .+ .+++||+|+|+|  .|+
T Consensus        90 ~~~~av~~W~~E--------------------~~gHfTQmVW~~Tt~VGCa~~~C~~~~~~~~~~~vVCnY~p~G--~g~  147 (206)
T 3s6s_A           90 SALKEILETFSA--------------------DKNSMRQVVYPKATRFGCSGRLRRNKKTGMRRMDWVCVYDKKP--KDG  147 (206)
T ss_dssp             HHHHHHHHHHTT--------------------CHHHHHHHHCTTCCEEEEEEEECC-------EEEEEEEESCCC--CTT
T ss_pred             hHHHHHHHHHhh--------------------hhhhHHHHHHHhhceeeEEEEEecCcCCCCceEEEEEEeCCCC--CCC
Confidence            345999999887                    468999999999999999999996    22 379999999988  999


Q ss_pred             cccCCCCCCC
Q psy15927         88 FNENVPNVVK   97 (98)
Q Consensus        88 ~~~nv~~p~~   97 (98)
                      .+|..++|++
T Consensus       148 ~~Y~~G~pCS  157 (206)
T 3s6s_A          148 ESFEGGKPCN  157 (206)
T ss_dssp             CCCCCSCCCS
T ss_pred             CCcccCCCCC
Confidence            9999999985

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	98
d1qnxa_	209	d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jac	1e-14
d1smba_	149	d.111.1.1 (A:) Golgi-associated PR-1 protein {Huma	7e-13
d1rc9a1	164	d.111.1.1 (A:1-164) Cysteine-rich secretory protei	1e-11
d1cfea_	135	d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1	4e-11

>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]} Length = 209

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Insect allergen 5 (AG5)
species: Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]

 Score = 63.8 bits (154), Expect = 1e-14
 Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 7/84 (8%)

Query: 5   TSPITDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGI 64
            S           V  W +E+KDY                 TGH+TQ++W  TK VG G 
Sbjct: 122 GSTAAKYDDPVKLVKMWEDEVKDYNP----KKKFSGNDFLKTGHYTQMVWANTKEVGCGS 177

Query: 65  AK---GDQNRVVVVANYSPAGNVV 85
            K      ++  +V NY P+GN  
Sbjct: 178 IKYIQEKWHKHYLVCNYGPSGNFK 201

>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Golgi-associated PR-1 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.4 bits (140), Expect = 7e-13
 Identities = 36/87 (41%), Positives = 47/87 (54%), Gaps = 9/87 (10%)

Query: 9   TDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGD 68
           + +Q  +   D WY+EIK+Y         Q+    S TGHFT ++WK TK +G+G A   
Sbjct: 68  SYDQTGKEVADRWYSEIKNY-------NFQQPGFTSGTGHFTAMVWKNTKKMGVGKASAS 120

Query: 69  QNRVVVVANYSPAGNVV--RYFNENVP 93
                VVA Y PAGNVV   +F ENV 
Sbjct: 121 DGSSFVVARYFPAGNVVNEGFFEENVL 147

>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein (SteCRISP) {Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]} Length = 164

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Cysteine-rich secretory protein (SteCRISP)
species: Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]

 Score = 55.7 bits (133), Expect = 1e-11
 Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 7/86 (8%)

Query: 9   TDEQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAK-- 66
                  + + +W++E KD+K       +      + TGH+TQ++W  +  +G   A   
Sbjct: 81  PYPMKWTDIIHAWHDEYKDFK-----YGVGADPPNAVTGHYTQIVWYKSYRIGCAAAYCP 135

Query: 67  GDQNRVVVVANYSPAGNVVRYFNENV 92
                   V  Y PAGN +       
Sbjct: 136 SSPYSYFFVCQYCPAGNFIGKTATPY 161

>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]} Length = 135

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Pathogenesis-related protein 1 (PR1)
species: Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]

 Score = 53.3 bits (127), Expect = 4e-11
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 5/72 (6%)

Query: 14  VQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVV 73
            + AV  W +E   Y          + + G    H+TQ++W+ +  +G G A+ +     
Sbjct: 64  GRAAVQLWVSERPSYN-----YATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWF 118

Query: 74  VVANYSPAGNVV 85
           +  NY P GN +
Sbjct: 119 ISCNYDPVGNWI 130

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	98
d1smba_	149	Golgi-associated PR-1 protein {Human (Homo sapiens	99.94
d1cfea_	135	Pathogenesis-related protein 1 (PR1) {Tomato (Lyco	99.94
d1rc9a1	164	Cysteine-rich secretory protein (SteCRISP) {Chines	99.91
d1qnxa_	209	Insect allergen 5 (AG5) {Yellow jacket (Vespula vu	99.88

>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Golgi-associated PR-1 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4.8e-28  Score=152.56  Aligned_cols=77  Identities=47%  Similarity=0.780  Sum_probs=68.3

Q ss_pred             HHHHHHHHHHHHHhhcCCCCCCCcccccccCCCCcchhhHhhhcccceEEEEEEEcCCCCEEEEEEecCCCCCccc--cc
Q psy15927         12 QAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVVVANYSPAGNVVRY--FN   89 (98)
Q Consensus        12 ~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~vC~Y~p~GN~~g~--~~   89 (98)
                      ..+.++|+.|++|..+|+ +..+ .     ....+||||||||.++++||||++.|.++..++||+|+|+||+.|+  |.
T Consensus        71 ~~~~~~v~~W~~e~~~y~-~~~~-~-----~~~~~ghftqmvw~~t~~vGCg~a~c~~~~~~~VC~Y~p~GN~~~~~~y~  143 (149)
T d1smba_          71 QTGKEVADRWYSEIKNYN-FQQP-G-----FTSGTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFFE  143 (149)
T ss_dssp             CCHHHHHHHHHGGGGGCC-TTSC-C-----CCGGGHHHHHHHCTTCCEEEEEEEECTTSCEEEEEEEESCCCCCSTTHHH
T ss_pred             ccHHHHHHHHHHHHhhcc-cCCC-C-----cccccchhhheecCCceEeeEEEEEcCCCCEEEEEEeeCCCCcCCcccch
Confidence            356789999999999999 8774 2     3456899999999999999999999988778999999999999775  89


Q ss_pred             cCCCCC
Q psy15927         90 ENVPNV   95 (98)
Q Consensus        90 ~nv~~p   95 (98)
                      +||+||
T Consensus       144 ~nv~~p  149 (149)
T d1smba_         144 ENVLPP  149 (149)
T ss_dssp             HHSCCC
T ss_pred             hcCCCc
Confidence            999998

>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Pathogenesis-related protein 1 (PR1)
species: Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]

Probab=99.94  E-value=7.7e-28  Score=149.85  Aligned_cols=75  Identities=24%  Similarity=0.500  Sum_probs=66.0

Q ss_pred             hHHHHHHHHHHHHHhhcCCCCCCCcccccccCCCCcchhhHhhhcccceEEEEEEEcCCCCEEEEEEecCCCCCcccccc
Q psy15927         11 EQAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNRVVVVANYSPAGNVVRYFNE   90 (98)
Q Consensus        11 ~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~vC~Y~p~GN~~g~~~~   90 (98)
                      +..+.++|+.||+|.++|+ +.. +.+   .....++|||||||++|++||||++.|.++.+++||+|+|+||+.|+++|
T Consensus        61 ~~~~~~av~~W~~E~~~y~-~~~-~~~---~~~~~~ghftQmvW~~t~~vGCa~~~c~~~~~~vVC~Y~P~GN~~g~~pY  135 (135)
T d1cfea_          61 DFTGRAAVQLWVSERPSYN-YAT-NQC---VGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQRPY  135 (135)
T ss_dssp             SCCHHHHHHHHHTTGGGEE-GGG-TEE---CSSSCCSSHHHHHCTTCCEEEEEEEECTTSSEEEEEECSSCCSCTTSCCC
T ss_pred             CCCHHHHHHHHHhhccccc-ccc-ccC---CCCcccchhheeeehhheEeeEEEEEECCCCEEEEEEEeCCCCcCCcCCC
Confidence            3457899999999999999 876 333   45678999999999999999999999998878999999999999999876

>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein (SteCRISP) {Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Cysteine-rich secretory protein (SteCRISP)
species: Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]

Probab=99.91  E-value=2.9e-25  Score=141.64  Aligned_cols=74  Identities=27%  Similarity=0.524  Sum_probs=63.8

Q ss_pred             HHHHHHHHHHHHHhhcCCCCCCCcccccccCCCCcchhhHhhhcccceEEEEEEEcCCCC--EEEEEEecCCCCCccccc
Q psy15927         12 QAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNR--VVVVANYSPAGNVVRYFN   89 (98)
Q Consensus        12 ~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~--~~~vC~Y~p~GN~~g~~~   89 (98)
                      ..+.++|+.||+|..+|+ +... .+   ..+..++|||||||++|++||||++.|.++.  +++||+|+|+||+.||++
T Consensus        84 ~~~~~~v~~W~~E~~~~~-~~~~-~~---~~~~~~ghftqmvW~~t~~vGCa~~~c~~~~~~~~vVC~Y~P~GN~~g~~~  158 (164)
T d1rc9a1          84 MKWTDIIHAWHDEYKDFK-YGVG-AD---PPNAVTGHYTQIVWYKSYRIGCAAAYCPSSPYSYFFVCQYCPAGNFIGKTA  158 (164)
T ss_dssp             CCHHHHHHHHHGGGGGEE-TTTE-ES---STTCCCHHHHHHTCTTCCEEEEEEEECTTSSSSEEEEEEEESCCCCTTCTT
T ss_pred             CCHHHHHHHHhhhhheee-cCCC-CC---CCcchhhHHHHHhhhcccEEeEEEEEeCCCCceEEEEEEEcCCCccCCCcC
Confidence            347899999999999999 8763 32   4567899999999999999999999998753  789999999999999976


Q ss_pred             c
Q psy15927         90 E   90 (98)
Q Consensus        90 ~   90 (98)
                      .
T Consensus       159 ~  159 (164)
T d1rc9a1         159 T  159 (164)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Insect allergen 5 (AG5)
species: Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]

Probab=99.88  E-value=9e-24  Score=139.00  Aligned_cols=77  Identities=32%  Similarity=0.467  Sum_probs=64.2

Q ss_pred             HHHHHHHHHHHHHhhcCCCCCCCcccccccCCCCcchhhHhhhcccceEEEEEEEcCCCC---EEEEEEecCCCCCcccc
Q psy15927         12 QAVQNAVDSWYNEIKDYKLFGREPTMQELMSGSPTGHFTQLIWKGTKAVGIGIAKGDQNR---VVVVANYSPAGNVVRYF   88 (98)
Q Consensus        12 ~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~---~~~vC~Y~p~GN~~g~~   88 (98)
                      ..+.++|+.|++|..+|+ +... .+.  ..+..+||||||||++|++||||++.|..+.   +++||+|+|+||+.|+.
T Consensus       129 ~~~~~~v~~W~~E~~~~~-~~~~-~~~--~~~~~~ghftQmvw~~t~~VGCa~~~c~~~~~~~~~vVC~Y~p~GN~~g~~  204 (209)
T d1qnxa_         129 DDPVKLVKMWEDEVKDYN-PKKK-FSG--NDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGNFKNEE  204 (209)
T ss_dssp             CCHHHHHHHHHGGGGGCC-TTSC-GGG--SCHHHHHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEEESCCCCTTSC
T ss_pred             ccHHHHHHHHHHHhhhcC-CCcc-ccc--CCccccchhHHHhhhhhCEEeEEEEEEcCCCCCEEEEEEEECCCCCCCCCC
Confidence            357789999999999999 7663 221  3345799999999999999999999997643   68999999999999999


Q ss_pred             ccCC
Q psy15927         89 NENV   92 (98)
Q Consensus        89 ~~nv   92 (98)
                      +|.+
T Consensus       205 ~Y~~  208 (209)
T d1qnxa_         205 LYQT  208 (209)
T ss_dssp             SSCB
T ss_pred             CCcc
Confidence            8865