Psyllid ID: psy15968

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Protein Sequence
MKMKERERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYIDEFINIVDSTLGSDVEDMVKSLGTLYEAVNNEDIDLLLGPTMDKLFARTGSKKLAQLKDKVLKSRDIDDLSRTDTSIHDLSRTENKLSEYYAAAPANGDIMREDLTHAYQLRNADKGMNGGLRGMDEHGGITTWSQCVQNAEPGSHQLPSIGQHVCALGAVEGGGGM
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccHHHccccHHHHHHccccHHHHHcccccccHccccccccccccccccccccccHHHccccccccccccccccccccccHHHcccccccccccccHcccccccHHccccccccccccccccccccccEHHHHHHHcccEEccccc
Coil and Loop (DISEMBL)
MKMKERERKFYAAVSIIQnlpksgpiqtplnTMLQFYALYKQategpnnqpkpafwDIVRKTKWDAWTKLGDMSKEAAMQRYIDEFINIVDSTLGSDVEDMVKSLGTLYEavnnedidlllgpTMDKLFARTGSKKLAQLKDKVlksrdiddlsrtdtsihdLSRTENKLSEYyaaapangdiMREDLTHAYQlrnadkgmngglrgmdehggittwsqcvqnaepgshqlpsigQHVCALgaveggggm
Flexible Loop (DISEMBL)
MKMKERERKFYAAVSIIqnlpksgpiQTPLNTMLQFYALYKQATegpnnqpkpaFWDIVRKTKWDAWTKLGDMSKEAAMQRYIDEFINIVDSTLGSDVEDMVKSLGTLYEAVNNEDIDLLLGPTMDKLFARTgskklaqlkdkvlksrdiddlsrtdtsihdlsrtenklSEYYAAAPANGDIMREDLTHAYQLRNADKGMNGGLRGMDEHGGITTWSQCVQNAEPGSHQLPSIGQHVCALGAVEGGGGM
Low Complexity Region (SEG)
MKMKERERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYIDEFINIVDSTLGSDVEDMVKSLGTLYEAVNNEDIDLLLGPTMDKLFARTGSKKLAQLKDKVLKSRDIDDLSRTDTSIHDLSRTENKLSEYYAAAPANGDIMREDLTHAYQLRNADKGMNGGLRGMDEHGGITTWSQCVQNAEPGSHQLPSIGQHVCALGAVEGGGGM
Disordered region (IsUnstruct)
*********FYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQAT********PAFWDIVRKTKWDAWTKLGDMSKEAAMQRYIDEFINIVDSTLGSDVEDMVKSLGTLYEAVNNEDIDLLLGPTMDKLFART****************************************YYAAA***GDIMREDLTHAYQLR**************EHGGITTWSQCVQ***********IGQHVCALG********
Disordered Region (DISOPRED)
***KERERKFYAAVSIIQ*************TMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYIDEFINIVD***************************************************************************************************************************************************************
Disordered Region (DISEMBL)
********KFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYIDEFINIVDSTLGSDVEDMVKSLGTLYEAVNNEDIDLLLGPTMDKLFARTGSKKLAQLKDKVLKSRDIDDLSRTDTSIHDLSRTENKLSEYYAAAPANGDIMREDLTHAYQLRNADKGMNGGLRGMDEHGGITTWSQCVQNAEPGSHQLPSIGQHVCALGAVEGGGGM
Disordered Region (DISPRO)
******ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYIDEFINIVDSTLGSDVEDMVKSLGTLYEAVNNEDIDLLLGPTMDKLFAR**************************************************DIMREDLTHAYQLRNADKGMNGGLRGMDEHGGITTWSQCVQNAEPGSHQLPSIGQHVCALGAVE*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKMKERERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYIDEFINIVDSTLGSDVEDMVKSLGTLYEAVNNEDIDLLLGPTMDKLFARTGSKKLAQLKDKVLKSRDIDDLSRTDTSIHDLSRTENKLSEYYAAAPANGDIMREDLTHAYQLRNADKGMNGGLRGMDEHGGITTWSQCVQNAEPGSHQLPSIGQHVCALGAVEGGGGM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	250	2.2.26 [Sep-21-2011]
Q502L1	501	Acyl-CoA-binding domain-c	yes	N/A	0.428	0.213	0.5	1e-26
Q5ZHQ6	492	Acyl-CoA-binding domain-c	yes	N/A	0.428	0.217	0.490	1e-25
Q640U0	458	Acyl-CoA-binding domain-c	yes	N/A	0.428	0.233	0.5	1e-25
Q641E3	467	Acyl-CoA-binding domain-c	N/A	N/A	0.436	0.233	0.490	2e-25
Q5R7V3	525	Acyl-CoA-binding domain-c	yes	N/A	0.436	0.207	0.454	1e-24
Q5T8D3	534	Acyl-CoA-binding domain-c	yes	N/A	0.436	0.204	0.454	3e-24
P07106	533	Acyl-CoA-binding domain-c	yes	N/A	0.436	0.204	0.472	4e-24
A0FKI7	506	Acyl-CoA-binding domain-c	yes	N/A	0.436	0.215	0.454	4e-24
Q5XG73	508	Acyl-CoA-binding domain-c	yes	N/A	0.436	0.214	0.454	5e-24
Q8NC06	268	Acyl-CoA-binding domain-c	no	N/A	0.432	0.402	0.451	9e-22

>sp|Q502L1|ACB5A_DANRE Acyl-CoA-binding domain-containing protein 5A OS=Danio rerio GN=acbd5a PE=2 SV=1

 Score =  120 bits (301), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 54/108 (50%), Positives = 77/108 (71%), Gaps = 1/108 (0%)

Query: 7   ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
           E++F AAV +IQNLP +G  Q   + ML+FY+ YKQAT+GP N P+P FWD V K KWDA
Sbjct: 10  EQRFNAAVKVIQNLPPNGSFQPSHDMMLKFYSYYKQATQGPCNIPRPGFWDPVGKAKWDA 69

Query: 67  WTKLGDMSKEAAMQRYIDEFINIVDS-TLGSDVEDMVKSLGTLYEAVN 113
           W+ LG+M KE AM  Y+D+   I++S  + S+VE++++ +G  YE V+
Sbjct: 70  WSSLGEMPKEEAMAAYVDDLKLILESMPVSSEVEELLQVIGPFYELVD 117

Binds medium- and long-chain acyl-CoA esters.
Danio rerio (taxid: 7955)

>sp|Q5ZHQ6|ACBD5_CHICK Acyl-CoA-binding domain-containing protein 5 OS=Gallus gallus GN=ACBD5 PE=2 SV=1

 Score =  117 bits (292), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 53/108 (49%), Positives = 76/108 (70%), Gaps = 1/108 (0%)

Query: 9   KFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWT 68
           +F AAV +IQ+LPK+G  Q     ML+FY+ YKQAT+GP N P+P FWD + + KWDAW+
Sbjct: 11  RFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATQGPCNIPRPGFWDPIGRYKWDAWS 70

Query: 69  KLGDMSKEAAMQRYIDEFINIVDSTLGSD-VEDMVKSLGTLYEAVNNE 115
            LGDMSKE AM  Y++E   I++S   +D VE++++ +G  YE V ++
Sbjct: 71  ALGDMSKEEAMIAYVEEMKKILESMPMTDKVEELLQVIGPFYEIVEDK 118

Binds medium- and long-chain acyl-CoA esters.

Gallus gallus (taxid: 9031)

>sp|Q640U0|ACBD5_XENTR Acyl-CoA-binding domain-containing protein 5 OS=Xenopus tropicalis GN=acbd5 PE=2 SV=1

 Score =  117 bits (292), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/108 (50%), Positives = 74/108 (68%), Gaps = 1/108 (0%)

Query: 9   KFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWT 68
           +F AAVS+IQ+LPK+G  Q     ML+FY+ YKQAT GP N P+P FWD V + KWDAW 
Sbjct: 11  RFEAAVSVIQSLPKNGSFQPSNEMMLKFYSFYKQATLGPCNTPRPGFWDPVGRYKWDAWN 70

Query: 69  KLGDMSKEAAMQRYIDEFINIVDS-TLGSDVEDMVKSLGTLYEAVNNE 115
            LGDMSKE AM  Y+DE   I+++  +   VE++++ +G  YE V ++
Sbjct: 71  SLGDMSKEDAMIAYVDEMKKILETMPVTEKVEELLQVIGPFYEIVEDK 118

Binds medium- and long-chain acyl-CoA esters.

Xenopus tropicalis (taxid: 8364)

>sp|Q641E3|ACBD5_XENLA Acyl-CoA-binding domain-containing protein 5 OS=Xenopus laevis GN=acbd5 PE=2 SV=1

 Score =  115 bits (289), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 54/110 (49%), Positives = 75/110 (68%), Gaps = 1/110 (0%)

Query: 7   ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
           + +F AAVS+IQ+LPK+G  Q     ML+FY+ YKQAT GP N  +P FWD V + KWDA
Sbjct: 9   QTRFEAAVSVIQSLPKNGSFQPSNEMMLKFYSFYKQATLGPCNTARPGFWDPVGRYKWDA 68

Query: 67  WTKLGDMSKEAAMQRYIDEFINIVDSTLGSD-VEDMVKSLGTLYEAVNNE 115
           W  LGDMSKE AM  Y+DE   I+++   +D VE++++ +G  YE V ++
Sbjct: 69  WNSLGDMSKEDAMIAYVDEMKKIIETMPVTDKVEELLQVIGPFYEIVEDK 118

Binds medium- and long-chain acyl-CoA esters.

Xenopus laevis (taxid: 8355)

>sp|Q5R7V3|ACBD5_PONAB Acyl-CoA-binding domain-containing protein 5 OS=Pongo abelii GN=ACBD5 PE=2 SV=1

 Score =  113 bits (282), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 1/110 (0%)

Query: 7   ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
           E +F AAV +IQ+LPK+G  Q     ML+FY+ YKQATEGP    +P FWD + + KWDA
Sbjct: 44  ETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDA 103

Query: 67  WTKLGDMSKEAAMQRYIDEFINIVDST-LGSDVEDMVKSLGTLYEAVNNE 115
           W+ LGDM+KE AM  Y++E   I+++  +   VE++++ +G  YE V ++
Sbjct: 104 WSSLGDMTKEEAMSAYVEEMKKIIETMPMTEKVEELLRVIGPFYEIVEDK 153

Binds medium- and long-chain acyl-CoA esters.

Pongo abelii (taxid: 9601)

>sp|Q5T8D3|ACBD5_HUMAN Acyl-CoA-binding domain-containing protein 5 OS=Homo sapiens GN=ACBD5 PE=1 SV=1

 Score =  112 bits (280), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 1/110 (0%)

Query: 7   ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
           E +F AAV +IQ+LPK+G  Q     ML+FY+ YKQATEGP    +P FWD + + KWDA
Sbjct: 42  ETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDA 101

Query: 67  WTKLGDMSKEAAMQRYIDEFINIVDST-LGSDVEDMVKSLGTLYEAVNNE 115
           W+ LGDM+KE AM  Y++E   I+++  +   VE++++ +G  YE V ++
Sbjct: 102 WSSLGDMTKEEAMIAYVEEMKKIIETMPMTEKVEELLRVIGPFYEIVEDK 151

Binds medium- and long-chain acyl-CoA esters.

Homo sapiens (taxid: 9606)

>sp|P07106|ACBD5_BOVIN Acyl-CoA-binding domain-containing protein 5 OS=Bos taurus GN=ACBD5 PE=2 SV=2

 Score =  112 bits (279), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 52/110 (47%), Positives = 73/110 (66%), Gaps = 1/110 (0%)

Query: 7   ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
           E +F AAV +IQ+LPK+G  Q     ML+FY+ YKQATEGP    KP FWD V + KWDA
Sbjct: 43  ETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSKPGFWDPVGRYKWDA 102

Query: 67  WTKLGDMSKEAAMQRYIDEFINIVDS-TLGSDVEDMVKSLGTLYEAVNNE 115
           W+ LGDM+KE AM  Y++E   I+++  +   VE+++  +G  YE V ++
Sbjct: 103 WSSLGDMTKEEAMIAYVEEMKKILETMPMTEKVEELLHVIGPFYEIVEDK 152

Binds medium- and long-chain acyl-CoA esters.

Bos taurus (taxid: 9913)

>sp|A0FKI7|ACBD5_RAT Acyl-CoA-binding domain-containing protein 5 OS=Rattus norvegicus GN=Acbd5 PE=1 SV=1

 Score =  111 bits (278), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 73/110 (66%), Gaps = 1/110 (0%)

Query: 7   ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
           E +F AAV +IQ+LPK+G  Q     ML+FY+ YKQATEGP    +P FWD + + KWDA
Sbjct: 45  ETRFEAAVKVIQSLPKNGSFQPTNEMMLRFYSFYKQATEGPCKLSRPGFWDPIGRYKWDA 104

Query: 67  WTKLGDMSKEAAMQRYIDEFINIVDST-LGSDVEDMVKSLGTLYEAVNNE 115
           W+ LGDM+KE AM  Y++E   I+++  +   VE+++  +G  YE V ++
Sbjct: 105 WSSLGDMTKEEAMIAYVEEMKKIIETMPMTEKVEELLHVIGPFYEIVEDK 154

Binds medium- and long-chain acyl-CoA esters.

Rattus norvegicus (taxid: 10116)

>sp|Q5XG73|ACBD5_MOUSE Acyl-CoA-binding domain-containing protein 5 OS=Mus musculus GN=Acbd5 PE=1 SV=1

 Score =  111 bits (278), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 73/110 (66%), Gaps = 1/110 (0%)

Query: 7   ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
           E +F AAV +IQ+LPK+G  Q     ML+FY+ YKQATEGP    +P FWD + + KWDA
Sbjct: 45  ETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDA 104

Query: 67  WTKLGDMSKEAAMQRYIDEFINIVDST-LGSDVEDMVKSLGTLYEAVNNE 115
           W+ LGDM+KE AM  Y++E   I+++  +   VE+++  +G  YE V ++
Sbjct: 105 WSSLGDMTKEEAMIAYVEEMKKIIETMPMTEKVEELLHVIGPFYEIVEDK 154

Binds medium- and long-chain acyl-CoA esters.

Mus musculus (taxid: 10090)

>sp|Q8NC06|ACBD4_HUMAN Acyl-CoA-binding domain-containing protein 4 OS=Homo sapiens GN=ACBD4 PE=1 SV=2

 Score =  103 bits (258), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 69/113 (61%), Gaps = 5/113 (4%)

Query: 7   ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
           +++F AAVS+IQNLPK+G  +     ML+FY+ YKQAT GP   P+P FWD + + KWDA
Sbjct: 13  QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72

Query: 67  WTKLGDMSKEAAMQRYIDEFI----NIVDST-LGSDVEDMVKSLGTLYEAVNN 114
           W  LG MS+E AM  YI E       ++D+  LG   EDM      LY+ + +
Sbjct: 73  WNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLYQVIPD 125

Binds medium- and long-chain acyl-CoA esters and may function as an intracellular carrier of acyl-CoA esters.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	250
307174135	353	Acyl-CoA-binding domain-containing prote	0.688	0.487	0.418	2e-32
383865761	354	PREDICTED: acyl-CoA-binding domain-conta	0.712	0.502	0.409	8e-32
328782802	350	PREDICTED: acyl-CoA-binding domain-conta	0.688	0.491	0.412	8e-32
380021196	350	PREDICTED: acyl-CoA-binding domain-conta	0.688	0.491	0.412	1e-31
307195682	353	Acyl-CoA-binding domain-containing prote	0.688	0.487	0.418	1e-31
340724700	350	PREDICTED: acyl-CoA-binding domain-conta	0.688	0.491	0.406	5e-31
350398453	350	PREDICTED: acyl-CoA-binding domain-conta	0.688	0.491	0.406	9e-31
328706682	299	PREDICTED: acyl-CoA-binding domain-conta	0.632	0.528	0.417	2e-30
66472450	501	acyl-CoA-binding domain-containing prote	0.428	0.213	0.5	6e-25
348503548	510	PREDICTED: acyl-CoA-binding domain-conta	0.524	0.256	0.424	8e-25

>gi|307174135|gb|EFN64793.1| Acyl-CoA-binding domain-containing protein 5 [Camponotus floridanus]

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 108/177 (61%), Gaps = 5/177 (2%)

Query: 7   ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
           E KF AAV++I+NLPK+G  Q     ML+FY+ YKQATEGP  Q KPAFW++++K KWDA
Sbjct: 4   EEKFNAAVNVIRNLPKNGAYQPSHEIMLRFYSYYKQATEGPCQQSKPAFWEVIKKAKWDA 63

Query: 67  WTKLGDMSKEAAMQRYIDEFINIVDSTLGSD-VEDMVKSLGTLYEAVNNEDIDLLLGPTM 125
           W++LG+MS+  AM  Y++E   IV++   +D V   + SL + YE+V  ED++LL+GP +
Sbjct: 64  WSRLGNMSRTEAMNNYVEELTKIVETMSYTDNVATFLGSLDSFYESVPAEDLELLVGPVL 123

Query: 126 DKLFARTGSKKLAQLKDKVLKSRDIDDLSRTDTSIHDLSRTENKLSEYYAAAPANGD 182
           +++ ++ GS     L    L SR+        TS H  S  E   +    A+P   D
Sbjct: 124 ERIRSQPGSP----LSGSPLASRETSPHRVCSTSRHITSSLETSPTSSRTASPLPQD 176

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383865761|ref|XP_003708341.1| PREDICTED: acyl-CoA-binding domain-containing protein 5-like [Megachile rotundata]

 Score =  143 bits (360), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 75/183 (40%), Positives = 110/183 (60%), Gaps = 5/183 (2%)

Query: 7   ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
           E +F AAV++I+NLPK+G  Q     ML+FYA YKQATEGP  QPKPAFW++++K KWDA
Sbjct: 4   EEQFQAAVNVIRNLPKNGAYQPSNEVMLRFYAYYKQATEGPCEQPKPAFWEVIKKAKWDA 63

Query: 67  WTKLGDMSKEAAMQRYIDEFINIVDSTLGSD-VEDMVKSLGTLYEAVNNEDIDLLLGPTM 125
           WT+LG+MS+  AM  Y++E   IV++   +D V   + SL T  E+V  ED++LLLGP +
Sbjct: 64  WTRLGNMSRTEAMNNYVEELKKIVETMSYTDKVATFLDSLDTFCESVPPEDLELLLGPVL 123

Query: 126 DKLFARTGSKKLAQLKDKVLKSRDIDDLSRTDTSIHDLSRTENKLSEYYAAAPANGDIMR 185
           +++     S+    L    L SR+       + S H  S  E   +  ++ +P + D   
Sbjct: 124 ERM----RSQPDLPLSGSPLASRETSPHRACNMSRHIASSLETSPASSHSVSPPDTDGEE 179

Query: 186 EDL 188
           E+ 
Sbjct: 180 EEF 182

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328782802|ref|XP_001122639.2| PREDICTED: acyl-CoA-binding domain-containing protein 5-like [Apis mellifera]

 Score =  143 bits (360), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 109/177 (61%), Gaps = 5/177 (2%)

Query: 7   ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
           E +F AAV++I+NLPK+G  Q     ML+FYA YKQATEGP  QPKPAFW++V+K KWDA
Sbjct: 4   EEQFQAAVNVIRNLPKNGAYQPSNEIMLRFYAYYKQATEGPCQQPKPAFWEVVKKAKWDA 63

Query: 67  WTKLGDMSKEAAMQRYIDEFINIVDSTLGSD-VEDMVKSLGTLYEAVNNEDIDLLLGPTM 125
           WT+LG+MS+  AM  Y++E   IV++   +D V + + SL +  E+V  ED++LLLGP +
Sbjct: 64  WTRLGNMSRTEAMNNYVEELKKIVETMSYTDKVANFLDSLDSFCESVPPEDLELLLGPVL 123

Query: 126 DKLFARTGSKKLAQLKDKVLKSRDIDDLSRTDTSIHDLSRTENKLSEYYAAAPANGD 182
           +++ ++ G      L    L SR+       + + H  S  E   +  +  +P + D
Sbjct: 124 ERMRSQPG----MPLSGSPLASRETSPHRVCNITRHIASSLETSPATSHGTSPPDTD 176

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380021196|ref|XP_003694457.1| PREDICTED: acyl-CoA-binding domain-containing protein 5-like [Apis florea]

 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 109/177 (61%), Gaps = 5/177 (2%)

Query: 7   ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
           E +F AAV++I+NLPK+G  Q     ML+FYA YKQATEGP  QPKPAFW++V+K KWDA
Sbjct: 4   EEQFQAAVNVIRNLPKNGAYQPSNEIMLRFYAYYKQATEGPCQQPKPAFWEVVKKAKWDA 63

Query: 67  WTKLGDMSKEAAMQRYIDEFINIVDSTLGSD-VEDMVKSLGTLYEAVNNEDIDLLLGPTM 125
           WT+LG+MS+  AM  Y++E   IV++   +D V + + SL +  E+V  ED++LLLGP +
Sbjct: 64  WTRLGNMSRTEAMNNYVEELKKIVETMSYTDKVANFLDSLDSFCESVPPEDLELLLGPVL 123

Query: 126 DKLFARTGSKKLAQLKDKVLKSRDIDDLSRTDTSIHDLSRTENKLSEYYAAAPANGD 182
           +++ ++ G      L    L SR+       + + H  S  E   +  +  +P + D
Sbjct: 124 ERMRSQPG----MPLSGSPLASRETSPHRVCNITRHIASSLETSPATSHGTSPPDTD 176

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307195682|gb|EFN77524.1| Acyl-CoA-binding domain-containing protein 4 [Harpegnathos saltator]

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 107/177 (60%), Gaps = 5/177 (2%)

Query: 7   ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
           E KF AAV++I+NLPK+G  Q     ML+FY+ YKQA EGP  Q KPAFW++V+K KWDA
Sbjct: 4   EEKFNAAVNVIRNLPKNGAYQPSHEIMLRFYSYYKQAIEGPCQQTKPAFWEVVKKAKWDA 63

Query: 67  WTKLGDMSKEAAMQRYIDEFINIVDSTLGSD-VEDMVKSLGTLYEAVNNEDIDLLLGPTM 125
           WT+LG+MS+  AM  Y++E   IV++   +D V   + SL + YE+V  ED++LL+GP +
Sbjct: 64  WTRLGNMSRTEAMNNYVEELKKIVETMSYTDNVATFLGSLDSFYESVPTEDLELLVGPVL 123

Query: 126 DKLFARTGSKKLAQLKDKVLKSRDIDDLSRTDTSIHDLSRTENKLSEYYAAAPANGD 182
           +++ ++ GS     L    L SR+       + S H  S  E   +    A+P   D
Sbjct: 124 ERMRSQPGSP----LSGSPLASRETSPHRVCNASRHITSSLETSPTSSRTASPLPQD 176

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340724700|ref|XP_003400719.1| PREDICTED: acyl-CoA-binding domain-containing protein 5-like [Bombus terrestris]

 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 5/177 (2%)

Query: 7   ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
           E +F AAV++I+NLPK+G  Q     ML+FYA YKQATEG   QPKPAFW++V+K KW+A
Sbjct: 4   EEQFQAAVNVIRNLPKNGAYQPSNEVMLRFYAYYKQATEGSCQQPKPAFWEVVKKAKWEA 63

Query: 67  WTKLGDMSKEAAMQRYIDEFINIVDSTLGSD-VEDMVKSLGTLYEAVNNEDIDLLLGPTM 125
           WT+LG+MS+  AM  Y++E   IV++   +D V + + SL +  E+V  ED++LLLGP +
Sbjct: 64  WTRLGNMSRTEAMNNYVEELKKIVETMSYTDKVANFLDSLDSFCESVPPEDLELLLGPVL 123

Query: 126 DKLFARTGSKKLAQLKDKVLKSRDIDDLSRTDTSIHDLSRTENKLSEYYAAAPANGD 182
           +++ ++ G      L    L SR+       + + H  S  E   +  ++A+P + D
Sbjct: 124 ERMRSQPG----MPLSSSPLASRETSPHRGCNMTRHIASSLETSPATSHSASPLDTD 176

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350398453|ref|XP_003485199.1| PREDICTED: acyl-CoA-binding domain-containing protein 5-like [Bombus impatiens]

 Score =  139 bits (351), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 5/177 (2%)

Query: 7   ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
           E +F AAV++I+NLPK+G  Q     ML+FYA YKQATEG   QPKPAFW++V+K KW+A
Sbjct: 4   EEQFQAAVNVIRNLPKNGAYQPSNEVMLRFYAYYKQATEGSCQQPKPAFWEVVKKAKWEA 63

Query: 67  WTKLGDMSKEAAMQRYIDEFINIVDSTLGSD-VEDMVKSLGTLYEAVNNEDIDLLLGPTM 125
           WT+LG+MS+  AM  Y++E   IV++   +D V + + SL +  E+V  ED++LLLGP +
Sbjct: 64  WTRLGNMSRTEAMNNYVEELKKIVETMSYTDKVANFLDSLDSFCESVPPEDLELLLGPVL 123

Query: 126 DKLFARTGSKKLAQLKDKVLKSRDIDDLSRTDTSIHDLSRTENKLSEYYAAAPANGD 182
           +++ ++ G      L    L SR+       + + H  S  E   +  ++A+P + D
Sbjct: 124 ERMRSQPG----MPLSGSPLASRETSPHRGCNMTRHIASSLETSPATSHSASPLDTD 176

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328706682|ref|XP_003243171.1| PREDICTED: acyl-CoA-binding domain-containing protein 5-like [Acyrthosiphon pisum]

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 101/163 (61%), Gaps = 5/163 (3%)

Query: 7   ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
           + KF AA+++I++LPK+G  Q   + +L+FYA +KQAT GPNNQPKP+FWD+V + KW A
Sbjct: 4   QEKFTAAINVIRSLPKNGAYQPSKDLLLRFYAYFKQATIGPNNQPKPSFWDVVNRAKWQA 63

Query: 67  WTKLGDMSKEAAMQRYIDEFINIVDSTLGSD-VEDMVKSLGTLYEAVNNEDIDLLLGPTM 125
           W  LGDMSKE AMQ Y+DE   IV++   ++ V D V SL + YE+V+ +D+++++GP  
Sbjct: 64  WYSLGDMSKEKAMQEYVDELKKIVETMAYTNPVADFVSSLDSFYESVSIDDLEMVVGPIE 123

Query: 126 DKLFARTGSKKLAQLKDKVLKSRDIDDLSRTDTSIHDLSRTEN 168
                   S  L  + +     +DI D    +   HD+    N
Sbjct: 124 RGNLIEKNSSSLISINEH----QDIADTEIDEECFHDVLEVNN 162

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66472450|ref|NP_001018483.1| acyl-CoA-binding domain-containing protein 5A [Danio rerio] gi|82228763|sp|Q502L1.1|ACB5A_DANRE RecName: Full=Acyl-CoA-binding domain-containing protein 5A gi|63102493|gb|AAH95655.1| Zgc:112043 [Danio rerio]

 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 54/108 (50%), Positives = 77/108 (71%), Gaps = 1/108 (0%)

Query: 7   ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
           E++F AAV +IQNLP +G  Q   + ML+FY+ YKQAT+GP N P+P FWD V K KWDA
Sbjct: 10  EQRFNAAVKVIQNLPPNGSFQPSHDMMLKFYSYYKQATQGPCNIPRPGFWDPVGKAKWDA 69

Query: 67  WTKLGDMSKEAAMQRYIDEFINIVDS-TLGSDVEDMVKSLGTLYEAVN 113
           W+ LG+M KE AM  Y+D+   I++S  + S+VE++++ +G  YE V+
Sbjct: 70  WSSLGEMPKEEAMAAYVDDLKLILESMPVSSEVEELLQVIGPFYELVD 117

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348503548|ref|XP_003439326.1| PREDICTED: acyl-CoA-binding domain-containing protein 5A-like [Oreochromis niloticus]

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 59/139 (42%), Positives = 88/139 (63%), Gaps = 8/139 (5%)

Query: 9   KFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWT 68
           +F AAV +I++LP +GP Q   + ML+FY+ YKQAT GP N P+P+FWD+V K KWDAW 
Sbjct: 18  RFDAAVKVIKSLPPNGPFQPSNDMMLKFYSYYKQATVGPCNIPRPSFWDVVGKAKWDAWN 77

Query: 69  KLGDMSKEAAMQRYIDEFINIVDSTLGSD-VEDMVKSLGTLYEAVNNE-------DIDLL 120
            LG+MSKE AM  Y+DE   I++    +D VE+++K LG  YE V+ +       D+   
Sbjct: 78  SLGEMSKEEAMSSYVDEMKLILEGMPMTDEVEELLKVLGPFYELVDEKKKITQISDLSTG 137

Query: 121 LGPTMDKLFARTGSKKLAQ 139
            G  M+ + + + +K + +
Sbjct: 138 FGTMMNSMASNSVAKSIVR 156

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	250
ZFIN|ZDB-GENE-050522-268	503	acbd5a "acyl-Coenzyme A bindin	0.436	0.216	0.490	2e-29
UNIPROTKB|Q5T8E0	294	ACBD5 "Acyl-CoA-binding domain	0.716	0.608	0.352	1.6e-24
UNIPROTKB|F1NM57	492	ACBD5 "Acyl-CoA-binding domain	0.428	0.217	0.490	2.5e-24
UNIPROTKB|Q5ZHQ6	492	ACBD5 "Acyl-CoA-binding domain	0.428	0.217	0.490	2.5e-24
UNIPROTKB|F1NM58	493	ACBD5 "Acyl-CoA-binding domain	0.428	0.217	0.490	2.5e-24
UNIPROTKB|Q5T8D3	534	ACBD5 "Acyl-CoA-binding domain	0.716	0.335	0.352	7.3e-24
UNIPROTKB|P07106	533	ACBD5 "Acyl-CoA-binding domain	0.716	0.335	0.352	2.6e-23
RGD|1309411	506	Acbd5 "acyl-CoA binding domain	0.568	0.280	0.4	4.6e-23
UNIPROTKB|F1LRH5	513	Acbd5 "Acyl-CoA-binding domain	0.568	0.276	0.4	4.8e-23
UNIPROTKB|F1N5Z3	522	ACBD5 "Acyl-CoA-binding domain	0.436	0.208	0.472	5.1e-23

ZFIN|ZDB-GENE-050522-268 acbd5a "acyl-Coenzyme A binding domain containing 5a" [Danio rerio (taxid:7955)]

 Score = 293 (108.2 bits), Expect = 2.0e-29, Sum P(2) = 2.0e-29
 Identities = 54/110 (49%), Positives = 78/110 (70%)

Query:     7 ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
             E++F AAV +IQNLP +G  Q   + ML+FY+ YKQAT+GP N P+P FWD V K KWDA
Sbjct:    11 EQRFNAAVKVIQNLPSNGSFQPSHDMMLKFYSYYKQATQGPCNIPRPGFWDPVGKAKWDA 70

Query:    67 WTKLGDMSKEAAMQRYIDEFINIVDST-LGSDVEDMVKSLGTLYEAVNNE 115
             W+ LG+M KE AM  Y+D+   I++S  + S+VE++++ +G  YE V+ +
Sbjct:    71 WSSLGEMPKEEAMAAYVDDLKLILESMPVSSEVEELLQVIGPFYELVDEK 120

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008289 "lipid binding" evidence=IEA

UNIPROTKB|Q5T8E0 ACBD5 "Acyl-CoA-binding domain-containing protein 5" [Homo sapiens (taxid:9606)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 69/196 (35%), Positives = 105/196 (53%)

Query:     7 ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
             E +F AAV +IQ+LPK+G  Q     ML+FY+ YKQATEGP    +P FWD + + KWDA
Sbjct:    51 ETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDA 110

Query:    67 WTKLGDMSKEAAMQRYIDEFINIVDST-LGSDVEDMVKSLGTLYEAVNNEDIDLLLGPTM 125
             W+ LGDM+KE AM  Y++E   I+++  +   VE++++ +G  YE V             
Sbjct:   111 WSSLGDMTKEEAMIAYVEEMKKIIETMPMTEKVEELLRVIGPFYEIVE------------ 158

Query:   126 DKLFARTGSKKLAQLKDKVLKSRDIDDLSRTDTSIHDLSRTENKLSEYYAAAPANGDIMR 185
             DK   R+      +L +K+  S+ ++DL    TS  +      K     + A +  +  +
Sbjct:   159 DKKSGRSSDITSVRL-EKI--SKCLEDLGNVLTSTPNAKTVNGKAESSDSGAESEEEEAQ 215

Query:   186 EDLTHAYQLRNADKGM 201
             E++  A Q  N DK M
Sbjct:   216 EEVKGAEQSDN-DKKM 230

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

UNIPROTKB|F1NM57 ACBD5 "Acyl-CoA-binding domain-containing protein 5" [Gallus gallus (taxid:9031)]

 Score = 283 (104.7 bits), Expect = 2.5e-24, P = 2.5e-24
 Identities = 53/108 (49%), Positives = 76/108 (70%)

Query:     9 KFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWT 68
             +F AAV +IQ+LPK+G  Q     ML+FY+ YKQAT+GP N P+P FWD + + KWDAW+
Sbjct:    11 RFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATQGPCNIPRPGFWDPIGRYKWDAWS 70

Query:    69 KLGDMSKEAAMQRYIDEFINIVDSTLGSD-VEDMVKSLGTLYEAVNNE 115
              LGDMSKE AM  Y++E   I++S   +D VE++++ +G  YE V ++
Sbjct:    71 ALGDMSKEEAMIAYVEEMKKILESMPMTDKVEELLQVIGPFYEIVEDK 118

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

UNIPROTKB|Q5ZHQ6 ACBD5 "Acyl-CoA-binding domain-containing protein 5" [Gallus gallus (taxid:9031)]

 Score = 283 (104.7 bits), Expect = 2.5e-24, P = 2.5e-24
 Identities = 53/108 (49%), Positives = 76/108 (70%)

Query:     9 KFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWT 68
             +F AAV +IQ+LPK+G  Q     ML+FY+ YKQAT+GP N P+P FWD + + KWDAW+
Sbjct:    11 RFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATQGPCNIPRPGFWDPIGRYKWDAWS 70

Query:    69 KLGDMSKEAAMQRYIDEFINIVDSTLGSD-VEDMVKSLGTLYEAVNNE 115
              LGDMSKE AM  Y++E   I++S   +D VE++++ +G  YE V ++
Sbjct:    71 ALGDMSKEEAMIAYVEEMKKILESMPMTDKVEELLQVIGPFYEIVEDK 118

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008289 "lipid binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

UNIPROTKB|F1NM58 ACBD5 "Acyl-CoA-binding domain-containing protein 5" [Gallus gallus (taxid:9031)]

 Score = 283 (104.7 bits), Expect = 2.5e-24, P = 2.5e-24
 Identities = 53/108 (49%), Positives = 76/108 (70%)

Query:     9 KFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWT 68
             +F AAV +IQ+LPK+G  Q     ML+FY+ YKQAT+GP N P+P FWD + + KWDAW+
Sbjct:    12 RFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATQGPCNIPRPGFWDPIGRYKWDAWS 71

Query:    69 KLGDMSKEAAMQRYIDEFINIVDSTLGSD-VEDMVKSLGTLYEAVNNE 115
              LGDMSKE AM  Y++E   I++S   +D VE++++ +G  YE V ++
Sbjct:    72 ALGDMSKEEAMIAYVEEMKKILESMPMTDKVEELLQVIGPFYEIVEDK 119

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA

UNIPROTKB|Q5T8D3 ACBD5 "Acyl-CoA-binding domain-containing protein 5" [Homo sapiens (taxid:9606)]

 Score = 280 (103.6 bits), Expect = 7.3e-24, P = 7.3e-24
 Identities = 69/196 (35%), Positives = 105/196 (53%)

Query:     7 ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
             E +F AAV +IQ+LPK+G  Q     ML+FY+ YKQATEGP    +P FWD + + KWDA
Sbjct:    42 ETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDA 101

Query:    67 WTKLGDMSKEAAMQRYIDEFINIVDST-LGSDVEDMVKSLGTLYEAVNNEDIDLLLGPTM 125
             W+ LGDM+KE AM  Y++E   I+++  +   VE++++ +G  YE V             
Sbjct:   102 WSSLGDMTKEEAMIAYVEEMKKIIETMPMTEKVEELLRVIGPFYEIVE------------ 149

Query:   126 DKLFARTGSKKLAQLKDKVLKSRDIDDLSRTDTSIHDLSRTENKLSEYYAAAPANGDIMR 185
             DK   R+      +L +K+  S+ ++DL    TS  +      K     + A +  +  +
Sbjct:   150 DKKSGRSSDITSVRL-EKI--SKCLEDLGNVLTSTPNAKTVNGKAESSDSGAESEEEEAQ 206

Query:   186 EDLTHAYQLRNADKGM 201
             E++  A Q  N DK M
Sbjct:   207 EEVKGAEQSDN-DKKM 221

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008289 "lipid binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|P07106 ACBD5 "Acyl-CoA-binding domain-containing protein 5" [Bos taurus (taxid:9913)]

 Score = 275 (101.9 bits), Expect = 2.6e-23, P = 2.6e-23
 Identities = 69/196 (35%), Positives = 103/196 (52%)

Query:     7 ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
             E +F AAV +IQ+LPK+G  Q     ML+FY+ YKQATEGP    KP FWD V + KWDA
Sbjct:    43 ETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSKPGFWDPVGRYKWDA 102

Query:    67 WTKLGDMSKEAAMQRYIDEFINIVDST-LGSDVEDMVKSLGTLYEAVNNEDIDLLLGPTM 125
             W+ LGDM+KE AM  Y++E   I+++  +   VE+++  +G  YE V             
Sbjct:   103 WSSLGDMTKEEAMIAYVEEMKKILETMPMTEKVEELLHVIGPFYEIVE------------ 150

Query:   126 DKLFARTGSKKLAQLKDKVLKSRDIDDLSRTDTSIHDLSRTENKLSEYYAAAPANGDIMR 185
             DK   R+      +L +K+  S+ ++DL     S  +      K     + A +  +  +
Sbjct:   151 DKKSGRSSDLTSVRL-EKI--SKCLEDLGNVLASTPNAKTVNGKAESSDSGAESEEEAAQ 207

Query:   186 EDLTHAYQLRNADKGM 201
             ED     + R++DK M
Sbjct:   208 EDPKRP-EPRDSDKKM 222

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008289 "lipid binding" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

RGD|1309411 Acbd5 "acyl-CoA binding domain containing 5" [Rattus norvegicus (taxid:10116)]

 Score = 272 (100.8 bits), Expect = 4.6e-23, P = 4.6e-23
 Identities = 60/150 (40%), Positives = 89/150 (59%)

Query:     7 ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
             E +F AAV +IQ+LPK+G  Q     ML+FY+ YKQATEGP    +P FWD + + KWDA
Sbjct:    45 ETRFEAAVKVIQSLPKNGSFQPTNEMMLRFYSFYKQATEGPCKLSRPGFWDPIGRYKWDA 104

Query:    67 WTKLGDMSKEAAMQRYIDEFINIVDST-LGSDVEDMVKSLGTLYEAV----NNEDIDLL- 120
             W+ LGDM+KE AM  Y++E   I+++  +   VE+++  +G  YE V    N++  DL  
Sbjct:   105 WSSLGDMTKEEAMIAYVEEMKKIIETMPMTEKVEELLHVIGPFYEIVEDKKNSKSSDLTS 164

Query:   121 -LGPTMDKLFARTGSKKLAQLKDKVLKSRD 149
              LG  +    A+  + K A+  D   +S +
Sbjct:   165 DLGNVLTSSNAKAVNGK-AESSDSGAESEE 193

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008289 "lipid binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

UNIPROTKB|F1LRH5 Acbd5 "Acyl-CoA-binding domain-containing protein 5" [Rattus norvegicus (taxid:10116)]

 Score = 272 (100.8 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 60/150 (40%), Positives = 89/150 (59%)

Query:     7 ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
             E +F AAV +IQ+LPK+G  Q     ML+FY+ YKQATEGP    +P FWD + + KWDA
Sbjct:    51 ETRFEAAVKVIQSLPKNGSFQPTNEMMLRFYSFYKQATEGPCKLSRPGFWDPIGRYKWDA 110

Query:    67 WTKLGDMSKEAAMQRYIDEFINIVDST-LGSDVEDMVKSLGTLYEAV----NNEDIDLL- 120
             W+ LGDM+KE AM  Y++E   I+++  +   VE+++  +G  YE V    N++  DL  
Sbjct:   111 WSSLGDMTKEEAMIAYVEEMKKIIETMPMTEKVEELLHVIGPFYEIVEDKKNSKSSDLTS 170

Query:   121 -LGPTMDKLFARTGSKKLAQLKDKVLKSRD 149
              LG  +    A+  + K A+  D   +S +
Sbjct:   171 DLGNVLTSSNAKAVNGK-AESSDSGAESEE 199

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

UNIPROTKB|F1N5Z3 ACBD5 "Acyl-CoA-binding domain-containing protein 5" [Bos taurus (taxid:9913)]

 Score = 272 (100.8 bits), Expect = 5.1e-23, P = 5.1e-23
 Identities = 52/110 (47%), Positives = 73/110 (66%)

Query:     7 ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
             E +F AAV +IQ+LPK+G  Q     ML+FY+ YKQATEGP    KP FWD V + KWDA
Sbjct:    43 ETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSKPGFWDPVGRYKWDA 102

Query:    67 WTKLGDMSKEAAMQRYIDEFINIVDST-LGSDVEDMVKSLGTLYEAVNNE 115
             W+ LGDM+KE AM  Y++E   I+++  +   VE+++  +G  YE V ++
Sbjct:   103 WSSLGDMTKEEAMIAYVEEMKKILETMPMTEKVEELLHVIGPFYEIVEDK 152

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	250
pfam00887	87	pfam00887, ACBP, Acyl CoA binding protein	9e-32
cd00435	85	cd00435, ACBP, Acyl CoA binding protein (ACBP) bin	4e-27
COG4281	87	COG4281, ACB, Acyl-CoA-binding protein [Lipid meta	2e-13
PTZ00458	90	PTZ00458, PTZ00458, acyl CoA binding protein; Prov	6e-11

>gnl|CDD|216174 pfam00887, ACBP, Acyl CoA binding protein

 Score =  111 bits (280), Expect = 9e-32
 Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 2/86 (2%)

Query: 7  ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
          E +F AAV  ++ LPK G  +      L+ YALYKQATEG  N P+P  +D++ K KWDA
Sbjct: 2  EEEFEAAVKFVKKLPKDG--RPSNEEKLKLYALYKQATEGDVNTPRPGMFDVIGKAKWDA 59

Query: 67 WTKLGDMSKEAAMQRYIDEFINIVDS 92
          W KL  MSKE AM++Y++    +V+ 
Sbjct: 60 WKKLKGMSKEEAMKKYVELVEELVEK 85

Length = 87

>gnl|CDD|238248 cd00435, ACBP, Acyl CoA binding protein (ACBP) binds thiol esters of long fatty acids and coenzyme A in a one-to-one binding mode with high specificity and affinity

 Score = 99.7 bits (249), Expect = 4e-27
 Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 4/77 (5%)

Query: 9  KFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWT 68
          +F AA   ++ L      +      LQ Y+LYKQAT G  N  +P  +D+  + KWDAW 
Sbjct: 4  EFEAAAEKVKKLK----TKPSNEEKLQLYSLYKQATVGDCNTERPGMFDLKGRAKWDAWN 59

Query: 69 KLGDMSKEAAMQRYIDE 85
           L  MSKE AM+ YI +
Sbjct: 60 SLKGMSKEDAMKAYIAK 76

Acyl-CoAs are important intermediates in fatty lipid synthesis and fatty acid degradation and play a role in regulation of intermediary metabolism and gene regulation. The suggested role of ACBP is to act as a intracellular acyl-CoA transporter and pool former. ACBPs are present in a large group of eukaryotic species and several tissue-specific isoforms have been detected. Length = 85

>gnl|CDD|226731 COG4281, ACB, Acyl-CoA-binding protein [Lipid metabolism]

 Score = 63.7 bits (155), Expect = 2e-13
 Identities = 24/54 (44%), Positives = 35/54 (64%)

Query: 31 NTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYID 84
          + +L+ YAL+KQ + G N+  KP F+DIV + K++AW  L   S+E A Q YI 
Sbjct: 23 DELLKLYALFKQGSVGDNDGEKPGFFDIVGRYKYEAWAGLKGKSQEDARQEYIA 76

Length = 87

>gnl|CDD|185637 PTZ00458, PTZ00458, acyl CoA binding protein; Provisional

 Score = 57.1 bits (138), Expect = 6e-11
 Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)

Query: 10 FYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTK 69
          F   VS I +LPK+  +   +   L  Y  YKQ+T G  N  +P+ +    + K++AW  
Sbjct: 5  FEECVSFINSLPKTVNL--SVEIKLDLYKYYKQSTVGNCNIKEPSMFKYQDRKKYEAWKS 62

Query: 70 LGDMSKEAAMQRYID 84
          + ++++E A +RY++
Sbjct: 63 IENLNREDAKKRYVE 77

Length = 90

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	250
cd00435	85	ACBP Acyl CoA binding protein (ACBP) binds thiol e	99.97
PTZ00458	90	acyl CoA binding protein; Provisional	99.97
PF00887	87	ACBP: Acyl CoA binding protein; InterPro: IPR00058	99.97
KOG0817|consensus	142		99.96
COG4281	87	ACB Acyl-CoA-binding protein [Lipid metabolism]	99.93
KOG3878|consensus	469		99.17
smart00295	207	B41 Band 4.1 homologues. Also known as ezrin/radix	96.89
PF00373	126	FERM_M: FERM central domain; InterPro: IPR019748 T	96.76
KOG3530|consensus	616		84.47

>cd00435 ACBP Acyl CoA binding protein (ACBP) binds thiol esters of long fatty acids and coenzyme A in a one-to-one binding mode with high specificity and affinity

Probab=99.97  E-value=1.4e-31  Score=206.28  Aligned_cols=83  Identities=37%  Similarity=0.663  Sum_probs=79.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHHHHHH
Q psy15968          6 RERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYIDE   85 (250)
Q Consensus         6 LEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~YIel   85 (250)
                      |+++|++|+++|++++.    .++++++|+|||||||||+|||+.++|++||+++|+||+||++++|||++|||++||++
T Consensus         1 ~~~~F~~A~~~v~~~~~----~~~~~~~L~lYalyKQAt~G~~~~~~P~~~d~~~~~K~~AW~~l~~ms~~eA~~~YV~~   76 (85)
T cd00435           1 LQEEFEAAAEKVKKLKT----KPSNEEKLQLYSLYKQATVGDCNTERPGMFDLKGRAKWDAWNSLKGMSKEDAMKAYIAK   76 (85)
T ss_pred             ChHHHHHHHHHHHhCCC----CcCHHHHHHHHHHHHHhccCCCCCCCCCcccHhhHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence            46899999999999886    69999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcC
Q psy15968         86 FINIVDS   92 (250)
Q Consensus        86 lekLl~k   92 (250)
                      +++++++
T Consensus        77 ~~~l~~~   83 (85)
T cd00435          77 VEELIAK   83 (85)
T ss_pred             HHHHhhc
Confidence            9999986

Acyl-CoAs are important intermediates in fatty lipid synthesis and fatty acid degradation and play a role in regulation of intermediary metabolism and gene regulation. The suggested role of ACBP is to act as a intracellular acyl-CoA transporter and pool former. ACBPs are present in a large group of eukaryotic species and several tissue-specific isoforms have been detected.

>PTZ00458 acyl CoA binding protein; Provisional

Probab=99.97  E-value=2.1e-31  Score=208.42  Aligned_cols=84  Identities=27%  Similarity=0.561  Sum_probs=79.7

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy15968          7 ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYIDEF   86 (250)
Q Consensus         7 Ee~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~YIell   86 (250)
                      .+.|++|+++|++++.++  .++++++|+|||||||||+|||+.++|++||+++|+||+||++++|||++|||++||++|
T Consensus         2 ~~~F~~A~~~v~~~~~~~--~~s~d~~L~lYalyKQAt~G~c~~~~P~~~d~~~raKw~AW~~l~~ms~~eA~~~YI~l~   79 (90)
T PTZ00458          2 ADLFEECVSFINSLPKTV--NLSVEIKLDLYKYYKQSTVGNCNIKEPSMFKYQDRKKYEAWKSIENLNREDAKKRYVEIV   79 (90)
T ss_pred             hHHHHHHHHHHHhCCCCC--CCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence            356999999999988764  589999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcC
Q psy15968         87 INIVDS   92 (250)
Q Consensus        87 ekLl~k   92 (250)
                      ++++++
T Consensus        80 ~~l~~~   85 (90)
T PTZ00458         80 TELFPN   85 (90)
T ss_pred             HHHhhc
Confidence            999987

>PF00887 ACBP: Acyl CoA binding protein; InterPro: IPR000582 Acyl-CoA-binding protein (ACBP) is a small (10 Kd) protein that binds medium- and long-chain acyl-CoA esters with very high affinity and may function as an intracellular carrier of acyl-CoA esters []

Probab=99.97  E-value=2.1e-31  Score=203.37  Aligned_cols=85  Identities=46%  Similarity=0.786  Sum_probs=77.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHHHHHH
Q psy15968          6 RERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYIDE   85 (250)
Q Consensus         6 LEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~YIel   85 (250)
                      |+++|+.|+++|+.++..  ..++++++|+|||||||||+|||+.++|++||+++++||+||++++|||++|||++||++
T Consensus         1 Le~~F~~A~~~v~~~~~~--~~~~~~~~L~LYalyKQAt~Gd~~~~~P~~~d~~~~~K~~AW~~l~gms~~eA~~~Yi~~   78 (87)
T PF00887_consen    1 LEEEFEAAVEFVSNLPKK--SQLSNDDKLELYALYKQATHGDCDTPRPGFFDIEGRAKWDAWKALKGMSKEEAMREYIEL   78 (87)
T ss_dssp             HHHHHHHHHHHHHHSSSC--STS-HHHHHHHHHHHHHHHTSS--S-CTTTTCHHHHHHHHHHHTTTTTHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHhcccc--CCCCHHHHHHHHHHHHHHHhCCCcCCCCcchhHHHHHHHHHHHHccCCCHHHHHHHHHHH
Confidence            789999999999999884  579999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcC
Q psy15968         86 FINIVDS   92 (250)
Q Consensus        86 lekLl~k   92 (250)
                      +++++++
T Consensus        79 v~~~~~~   85 (87)
T PF00887_consen   79 VEELIPK   85 (87)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9999875

ACBP is also known as diazepam binding inhibitor (DBI) or endozepine (EP) because of its ability to displace diazepam from the benzodiazepine (BZD) recognition site located on the GABA type A receptor. It is therefore possible that this protein also acts as a neuropeptide to modulate the action of the GABA receptor []. ACBP is a highly conserved protein of about 90 residues that is found in all four eukaryotic kingdoms, Animalia, Plantae, Fungi and Protista, and in some eubacterial species []. Although ACBP occurs as a completely independent protein, intact ACB domains have been identified in a number of large, multifunctional proteins in a variety of eukaryotic species. These include large membrane-associated proteins with N-terminal ACB domains, multifunctional enzymes with both ACB and peroxisomal enoyl-CoA Delta(3), Delta(2)-enoyl-CoA isomerase domains, and proteins with both an ACB domain and ankyrin repeats (IPR002110 from INTERPRO) []. The ACB domain consists of four alpha-helices arranged in a bowl shape with a highly exposed acyl-CoA-binding site. The ligand is bound through specific interactions with residues on the protein, most notably several conserved positive charges that interact with the phosphate group on the adenosine-3'phosphate moiety, and the acyl chain is sandwiched between the hydrophobic surfaces of CoA and the protein []. Other proteins containing an ACB domain include: Endozepine-like peptide (ELP) (gene DBIL5) from mouse []. ELP is a testis-specific ACBP homologue that may be involved in the energy metabolism of the mature sperm. MA-DBI, a transmembrane protein of unknown function which has been found in mammals. MA-DBI contains a N-terminal ACB domain. DRS-1 [], a human protein of unknown function that contains a N-terminal ACB domain and a C-terminal enoyl-CoA isomerase/hydratase domain. ; GO: 0000062 fatty-acyl-CoA binding; PDB: 2CB8_A 2FJ9_A 2LBB_A 1ST7_A 3EPY_B 2FDQ_C 1NTI_A 1HB8_A 1ACA_A 1NVL_A ....

>KOG0817|consensus

Probab=99.96  E-value=9.5e-30  Score=213.56  Aligned_cols=99  Identities=38%  Similarity=0.657  Sum_probs=89.7

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHHH
Q psy15968          3 MKERERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRY   82 (250)
Q Consensus         3 m~sLEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~Y   82 (250)
                      ++.+...|+.|++.+++|++    .|+++++|+|||||||||+|||++++||+||+++|+||+||++++|||++|||+.|
T Consensus         2 ~~~~~~~Fe~a~~~~~~l~~----~p~~ee~L~lYglyKQAt~G~~~~~kPg~~d~~~k~Kw~AW~~l~~~s~~eA~~~Y   77 (142)
T KOG0817|consen    2 AATLEAKFEAAAEAVKNLKK----KPSNEELLKLYGLYKQATVGDCNTPKPGFFDEEGKAKWQAWNSLGGMSKEEAMEAY   77 (142)
T ss_pred             cchHHHHHHHHHHHHHhccc----CCCHHHHHHHHHHHHhhccCCCCCCCCchhhHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence            45689999999999999998    59999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcC-CCchhHHHHHHhh
Q psy15968         83 IDEFINIVDS-TLGSDVEDMVKSL  105 (250)
Q Consensus        83 IellekLl~k-~~t~~~~~~l~~~  105 (250)
                      |+++++++++ ....+...+.+..
T Consensus        78 v~~~~~l~~~~~~~~~~~~~~~~~  101 (142)
T KOG0817|consen   78 VEKVEELIPKYGAEAETEEKTELT  101 (142)
T ss_pred             HHHHHHHHHHhhcccccccCcccc
Confidence            9999999999 5555555555433

>COG4281 ACB Acyl-CoA-binding protein [Lipid metabolism]

Probab=99.93  E-value=3e-26  Score=176.77  Aligned_cols=83  Identities=33%  Similarity=0.569  Sum_probs=79.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHHHHHH
Q psy15968          6 RERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYIDE   85 (250)
Q Consensus         6 LEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~YIel   85 (250)
                      +...|+.|...|+.|+.    +|++++.|+|||||||+++||++..+||+||++||+||+||..|+|.|+|+|.++||.+
T Consensus         2 ~s~~Feqa~~dV~~L~~----kP~~d~LLkLYAL~KQ~s~GD~~~ekPG~~d~~gr~K~eAW~~LKGksqedA~qeYial   77 (87)
T COG4281           2 LSTRFEQAQTDVKELSE----KPSNDELLKLYALFKQGSVGDNDGEKPGFFDIVGRYKYEAWAGLKGKSQEDARQEYIAL   77 (87)
T ss_pred             hhhHHHHHHHHHHHhcc----CCCcHHHHHHHHHHHhccccccCCCCCCccccccchhHHHHhhccCccHHHHHHHHHHH
Confidence            45789999999999998    79999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcC
Q psy15968         86 FINIVDS   92 (250)
Q Consensus        86 lekLl~k   92 (250)
                      |+++..+
T Consensus        78 VeeLkak   84 (87)
T COG4281          78 VEELKAK   84 (87)
T ss_pred             HHHHHhh
Confidence            9999765

>KOG3878|consensus

Probab=99.17  E-value=5.9e-11  Score=112.78  Aligned_cols=87  Identities=24%  Similarity=0.434  Sum_probs=79.1

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCC-C--CCcchhHHHHHHHHHhcCCCCHHHHHHH
Q psy15968          5 ERERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPK-P--AFWDIVRKTKWDAWTKLGDMSKEAAMQR   81 (250)
Q Consensus         5 sLEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~r-P--g~fD~vgRaKWdAWk~LkGMSkEEAm~~   81 (250)
                      .|++.+..|+.|.+.... +++.++++++|+|-+|-||+..|++++.+ |  |++|++|+.+..+|..|+.||+|+||..
T Consensus        31 ~LeElY~LA~~fyKe~~G-Ka~h~~YEd~lKLial~kQv~~Gp~n~d~~p~~G~lDv~GnDr~~~W~~LG~~sre~AM~~  109 (469)
T KOG3878|consen   31 PLEELYRLAFTFYKENSG-KAIHLSYEDNLKLIALKKQVALGPFNTDRAPALGVLDVIGNDRQQHWQLLGEISREQAMEG  109 (469)
T ss_pred             CHHHHHHHHHHHHHhccC-CccCCChhhhhhhhhhHhhhhcCCCCcccCcccceeecccChHHHHHHHHhcccHHHHHHH
Confidence            488999999999996443 57899999999999999999999999543 4  7999999999999999999999999999


Q ss_pred             HHHHHHHhhcC
Q psy15968         82 YIDEFINIVDS   92 (250)
Q Consensus        82 YIellekLl~k   92 (250)
                      ||.+++++|+.
T Consensus       110 FV~Lldr~C~~  120 (469)
T KOG3878|consen  110 FVDLLDRMCSA  120 (469)
T ss_pred             HHHHHHhcchh
Confidence            99999998876

>smart00295 B41 Band 4

Probab=96.89  E-value=0.0047  Score=51.31  Aligned_cols=78  Identities=21%  Similarity=0.181  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCC--------------CCcc-------hhHHHHHHH
Q psy15968          8 RKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKP--------------AFWD-------IVRKTKWDA   66 (250)
Q Consensus         8 e~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rP--------------g~fD-------~vgRaKWdA   66 (250)
                      --|..+...|..    |.+..+.++-+.|-||.-|+..||++.+..              .+.+       .....--++
T Consensus       101 ~ly~Q~~~di~~----g~~~~~~~~~~~Laal~~q~~~gd~~~~~~~~~~~~~~~~~lP~~~~~~~~~~~~~~~~~i~~~  176 (207)
T smart00295      101 LLYLQVRNDILE----GRLPCPEEEALLLAALALQAEFGDYDEELHVLLKELSLKRFLPKQLLDSEKRTLKEWRERIVSL  176 (207)
T ss_pred             HHHHHHHHHHHc----CccCCCHHHHHHHHHHHHHHHhcCCChHhcCCccccccceeCChhhhhhccccHHHHHHHHHHH
Confidence            446666665554    344678999999999999999999984321              1111       112333588


Q ss_pred             HHhcCCCCHHHHHHHHHHHHHHh
Q psy15968         67 WTKLGDMSKEAAMQRYIDEFINI   89 (250)
Q Consensus        67 Wk~LkGMSkEEAm~~YIellekL   89 (250)
                      |+++.|||+.+||.+||+++.++
T Consensus       177 ~~~~~~~s~~~a~~~yl~~~~~l  199 (207)
T smart00295      177 HKELIGLSPEEAKLKYLELAEKL  199 (207)
T ss_pred             HHHcCCCCHHHHHHHHHHHhccc
Confidence            99999999999999999999875

1 homologues. Also known as ezrin/radixin/moesin (ERM) protein domains. Present in myosins, ezrin, radixin, moesin, protein tyrosine phosphatases. Plasma membrane-binding domain. These proteins play structural and regulatory roles in the assembly and stabilization of specialized plasmamembrane domains. Some PDZ domain containing proteins bind one or more of this family. Now includes JAKs.

>PF00373 FERM_M: FERM central domain; InterPro: IPR019748 The FERM domain (F for 4

Probab=96.76  E-value=0.0042  Score=48.04  Aligned_cols=81  Identities=20%  Similarity=0.317  Sum_probs=56.6

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCC---CCCc-------------c-------hhHH
Q psy15968          5 ERERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPK---PAFW-------------D-------IVRK   61 (250)
Q Consensus         5 sLEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~r---Pg~f-------------D-------~vgR   61 (250)
                      .++--|..+...|-.    |.+..+.++-++|-||.-|+..||++...   .+.+             -       ....
T Consensus        10 ~~~lly~Q~~~~vl~----g~~~~~~e~a~~LAAl~~q~~~gd~~~~~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~   85 (126)
T PF00373_consen   10 TRHLLYLQARRDVLQ----GRLPCSEEDAIKLAALQLQAEYGDYNSEQEHSSGYIDPEIKEFQLENFIPKAPKLIKKMKQ   85 (126)
T ss_dssp             HHHHHHHHHHHHHHT----TSSTS-HHHHHHHHHHHHHHHHTSSTTTTTSSTTTTTGSHHCTCGHGTSSHHHHHHCCSTH
T ss_pred             HHHHHHHHHHHHHHc----CcCCCCHHHHHHHHHHHHHHHhcCCCcccccCcccccccccchhhhhhhhhhHHHHhhhhH
Confidence            355567777776655    44578999999999999999999998221   1111             1       0122


Q ss_pred             HHH-----HHHHhcCCCCHHHHHHHHHHHHHHh
Q psy15968         62 TKW-----DAWTKLGDMSKEAAMQRYIDEFINI   89 (250)
Q Consensus        62 aKW-----dAWk~LkGMSkEEAm~~YIellekL   89 (250)
                      ..|     ..|+++.|||..+||..||+++.++
T Consensus        86 ~~~~~~I~~~~~~l~~~s~~~a~~~fl~~~~~~  118 (126)
T PF00373_consen   86 KEWEKRILEQHKKLRGMSPEEAKLQFLQICQSL  118 (126)
T ss_dssp             HHHHHHHHHHHHHTTT--HHHHHHHHHHHHCTS
T ss_pred             HHHHHHHHHHHHHhhCCCHHHHHHHHHHHHhcC
Confidence            223     8899999999999999999999863

1 protein, E for ezrin, R for radixin and M for moesin) is a widespread protein module involved in localising proteins to the plasma membrane []. FERM domains are found in a number of cytoskeletal-associated proteins that associate with various proteins at the interface between the plasma membrane and the cytoskeleton. The FERM domain is located at the N terminus of the majority of FERM-containing proteins [, ], which includes: Band 4.1, which links the spectrin-actin cytoskeleton of erythrocytes to the plasma membrane. Ezrin, a component of the undercoat of the microvilli plasma membrane. Moesin, which is probably involved in binding major cytoskeletal structures to the plasma membrane. Radixin, which is involved in the binding of the barbed end of actin filaments to the plasma membrane in the undercoat of the cell- to-cell adherens junction. Talin, a cytoskeletal protein concentrated in regions of cell-substratum contact and, in lymphocytes, of cell-cell contacts. Filopodin, a slime mold protein that binds actin and which is involved in the control of cell motility and chemotaxis. Merlin (or schwannomin). Protein NBL4. Unconventional myosins X, VIIa and XV, which are mutated in congenital deafness. Focal-adhesion kinases (FAKs), cytoplasmic protein tyrosine kinases involved in signalling through integrins. Janus tyrosine kinases (JAKs), cytoplasmic tyrosine kinases that are non-covalently associated with the cytoplasmic tails of receptors for cytokines or polypeptidic hormones. Non-receptor tyrosine-protein kinase TYK2. Protein-tyrosine phosphatases PTPN3 and PTPN4, enzyme that appear to act at junctions between the membrane and the cytoskeleton. Protein-tyrosine phosphatases PTPN14 and PTP-D1, PTP-RL10 and PTP2E. Caenorhabditis elegans protein phosphatase ptp-1. Ezrin, moesin, and radixin are highly related proteins (ERM protein family), but the other proteins in which the FERM domain is found do not share any region of similarity outside of this domain. ERM proteins are made of three domains, the FERM domain, a central helical domain and a C-terminal tail domain, which binds F-actin. The amino-acid sequence of the FERM domain is highly conserved among ERM proteins and is responsible for membrane association by direct binding to the cytoplasmic domain or tail of integral membrane proteins. ERM proteins are regulated by an intramolecular association of the FERM and C-terminal tail domains that masks their binding sites for other molecules. For cytoskeleton-membrane cross-linking, the dormant molecules becomes activated and the FERM domain attaches to the membrane by binding specific membrane proteins, while the last 34 residues of the tail bind actin filaments. Aside from binding to membranes, the activated FERM domain of ERM proteins can also bind the guanine nucleotide dissociation inhibitor of Rho GTPase (RhoDGI), which suggests that in addition to functioning as a cross-linker, ERM proteins may influence Rho signalling pathways. The crystal structure of the FERM domain reveals that it is composed of three structural modules (F1, F2, and F3) that together form a compact clover-shaped structure []. The FERM domain has also been called the amino-terminal domain, the 30kDa domain, 4.1N30, the membrane-cytoskeletal-linking domain, the ERM-like domain, the ezrin-like domain of the band 4.1 superfamily, the conserved N-terminal region, and the membrane attachment domain [].; PDB: 4DXA_B 2EMS_A 2ZPY_A 1J19_A 2D10_B 2D11_B 1GC6_A 2D2Q_A 2EMT_A 2YVC_A ....

>KOG3530|consensus

Probab=84.47  E-value=2.5  Score=43.69  Aligned_cols=66  Identities=18%  Similarity=0.307  Sum_probs=53.1

Q ss_pred             CCCCCChHHHHHHHHHhhccccCCCCCCC--CCC---cch-------hHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Q psy15968         24 GPIQTPLNTMLQFYALYKQATEGPNNQPK--PAF---WDI-------VRKTKWDAWTKLGDMSKEAAMQRYIDEFINI   89 (250)
Q Consensus        24 G~~~ps~d~kL~LYALYKQAT~GDcn~~r--Pg~---fD~-------vgRaKWdAWk~LkGMSkEEAm~~YIellekL   89 (250)
                      |....+.+.-.+|=||-=|+..|||+.++  +++   |.|       -+.+=.+-||+++|++..+|+-.|+++++-+
T Consensus       118 GRL~Cp~~~AaeLaAl~lQsELGDYn~~~Ht~~yVSefRf~p~Qte~LE~~I~e~hK~~rGqspaqAElnyLnkAkwL  195 (616)
T KOG3530|consen  118 GRLYCPFETAAELAALILQSELGDYNEEEHTGGYVSEFRFLPNQTEELEERIFELHKELRGQSPAQAELNYLNKAKWL  195 (616)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhcCCChhhccccceeeeEecccccHHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhhh
Confidence            55567999999999999999999999653  332   222       2344578999999999999999999999864

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	250
3flv_A	119	The Crystal Structure Of Human Acyl-Coenzymea Bindi		5e-22
2wh5_A	106	Crystal Structure Of Human Acyl-Coa Binding Domain		2e-20
2cqu_A	116	Solution Structure Of Rsgi Ruh-045, A Human Acyl-Co		9e-15
3fp5_A	106	Crystal Structure Of Acbp From Moniliophthora Perni		1e-14
2cop_A	109	Solution Structure Of Rsgi Ruh-040, An Acbp Domain		5e-09
2fdq_A	86	Crystal Structure Of Acbp From Armadillo Harderian		5e-08
1hb6_A	86	Structure Of Bovine Acyl-Coa Binding Protein In Ort		2e-07
1st7_A	86	Solution Structure Of Acyl Coenzyme A Binding Prote		2e-07
2lbb_A	96	Solution Structure Of Acyl Coa Binding Protein From		3e-07
2cb8_A	87	High Resolution Crystal Structure Of Liganded Human		4e-07
2fj9_A	86	High Resolution Crystal Structure Of The Unliganded		4e-07
1hbk_A	89	Acyl-Coa Binding Protein From Plasmodium Falciparum		5e-06

>pdb|3FLV|A Chain A, The Crystal Structure Of Human Acyl-Coenzymea Binding Domain Containing 5 Length = 119

Iteration: 1
 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 44/87 (50%), Positives = 60/87 (68%)
Query: 6   RERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWD 65
            E +F AAV +IQ+LPK+G  Q     ML+FY+ YKQATEGP    +P FWD + + KWD
Sbjct: 24  HETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWD 83
Query: 66  AWTKLGDMSKEAAMQRYIDEFINIVDS 92
           AW+ LGDM+KE AM  Y++E   I+++
Sbjct: 84  AWSSLGDMTKEEAMIAYVEEMKKIIET 110

>pdb|2WH5|A Chain A, Crystal Structure Of Human Acyl-Coa Binding Domain 4 Complexed With Stearoyl-Coa Length = 106

Iteration: 1
 Score = 95.5 bits (236), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 55/79 (69%)
Query: 7  ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
          +++F AAVS+IQNLPK+G  +     ML+FY+ YKQAT GP   P+P FWD + + KWDA
Sbjct: 9  QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 68
Query: 67 WTKLGDMSKEAAMQRYIDE 85
          W  LG MS+E AM  YI E
Sbjct: 69 WNSLGKMSREEAMSAYITE 87

>pdb|2CQU|A Chain A, Solution Structure Of Rsgi Ruh-045, A Human Acyl-Coa Binding Protein Length = 116

Iteration: 1
 Score = 77.0 bits (188), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 32/51 (62%), Positives = 38/51 (74%)
Query: 34 LQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYID 84
          L+ YALYKQATEGP N PKP  +D++ K KWDAW  LG + KEAA Q Y+D
Sbjct: 40 LKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGSLPKEAARQNYVD 90

>pdb|3FP5|A Chain A, Crystal Structure Of Acbp From Moniliophthora Perniciosa Length = 106

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 9   KFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWT 68
           KF  AV I+Q+LPK GPI+   +  L FY  +KQAT G  N  +P   D   K KWDAW 
Sbjct: 7   KFDKAVEIVQSLPKDGPIKPTQDEQLYFYKYFKQATVGDVNISRPGLMDFTGKAKWDAWK 66
Query: 69  KLGDMSKEAAMQRYIDEFINIVDSTLGSDVEDMVKSLGTL 108
            +   SKE A Q+Y+++ + I+     +D E+  K +  +
Sbjct: 67  SVEGTSKEVAYQKYVEKLLEILKK---ADTEESKKYIAEI 103

>pdb|2COP|A Chain A, Solution Structure Of Rsgi Ruh-040, An Acbp Domain From Human Cdna Length = 109

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 31/51 (60%)
Query: 33 MLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYI 83
          +L  YA YKQ   G  N PKP+F+D   K KW+AW  LGD S   AMQ YI
Sbjct: 31 LLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDSSPSQAMQEYI 81

>pdb|2FDQ|A Chain A, Crystal Structure Of Acbp From Armadillo Harderian Gland Length = 86

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 10 FYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTK 69
          F  A   ++NL K+ P     + ML  Y+ YKQAT G  N  +P   D   K KWDAW +
Sbjct: 5  FDKAAEEVKNL-KTKPAD---DEMLFIYSHYKQATVGDINTERPGMLDFKGKAKWDAWNQ 60
Query: 70 LGDMSKEAAMQRYIDE 85
          L   SKE AM+ YID+
Sbjct: 61 LKGTSKEDAMKSYIDK 76

>pdb|1HB6|A Chain A, Structure Of Bovine Acyl-Coa Binding Protein In Orthorhombic Crystal Form Length = 86

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 31/52 (59%)
Query: 33 MLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYID 84
          ML  Y+ YKQAT G  N  +P   D   K KWDAW +L   SKE AM+ YID
Sbjct: 24 MLFIYSHYKQATVGDINTERPGMLDFKGKAKWDAWNELKGTSKEDAMKAYID 75

>pdb|1ST7|A Chain A, Solution Structure Of Acyl Coenzyme A Binding Protein From Yeast Length = 86

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 25 PIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYI 83
          P +   + +L+ YALYKQAT G N++ KP  +++  + KW+AW  L   S+E A + YI
Sbjct: 16 PTKPSTDELLELYALYKQATVGDNDKEKPGIFNMKDRYKWEAWENLKGKSQEDAEKEYI 74

>pdb|2LBB|A Chain A, Solution Structure Of Acyl Coa Binding Protein From Babesia Bovis T2bo Length = 96

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 10 FYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTK 69
          F AAV  + N   +  +    +  L FY  YKQAT G  N+PKP    +  K KW+AW  
Sbjct: 14 FDAAVKYVSN---TTTMMASNDDKLCFYKYYKQATVGDCNKPKPGMLQLQEKYKWEAWNA 70
Query: 70 LGDMSKEAAMQRYI 83
          L  MS E+A + Y+
Sbjct: 71 LRGMSTESAKEAYV 84

>pdb|2CB8|A Chain A, High Resolution Crystal Structure Of Liganded Human L-Acbp Length = 87

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 30/52 (57%)
Query: 33 MLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYID 84
          ML  Y  YKQAT G  N  +P   D   K KWDAW +L   SKE AM+ YI+
Sbjct: 25 MLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYIN 76

>pdb|2FJ9|A Chain A, High Resolution Crystal Structure Of The Unliganded Human Acbp Length = 86

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 30/52 (57%)
Query: 33 MLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYID 84
          ML  Y  YKQAT G  N  +P   D   K KWDAW +L   SKE AM+ YI+
Sbjct: 24 MLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYIN 75

>pdb|1HBK|A Chain A, Acyl-Coa Binding Protein From Plasmodium Falciparum Length = 89

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 10 FYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTK 69
          F   VS I  LP++  I  P    L  Y  YKQ+T G  N  +P+    + + K++AW  
Sbjct: 6  FEECVSFINGLPRT--INLPNELKLDLYKYYKQSTIGNCNIKEPSAHKYIDRKKYEAWKS 63
Query: 70 LGDMSKEAAMQRYID 84
          + ++++E A +RY+D
Sbjct: 64 VENLNREDAQKRYVD 78

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	250
3fp5_A	106	Acyl-COA binding protein; ACBP, cacao disease, fat	6e-31
2wh5_A	106	Acyl-COA-binding domain-containing protein 4; alte	2e-30
3flv_A	119	Acyl-COA-binding domain-containing protein 5; lipi	4e-29
2cb8_A	87	Acyl-COA-binding protein; acyl-coenzyme A binding	3e-27
2lbb_A	96	Acyl COA binding protein; protein binding, structu	3e-27
1hbk_A	89	ACBP, acyl-COA binding protein; fatty acid metabol	4e-27
2cqu_A	116	Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA bi	7e-27
1st7_A	86	ACBP, acyl-COA-binding protein; four helix bundle,	3e-26
3epy_A	89	Acyl-COA-binding domain-containing protein 7; acyl	1e-25
2cop_A	109	Acyl-coenzyme A binding domain containing 6; acyl	3e-23
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05

>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} Length = 106

 Score =  109 bits (274), Expect = 6e-31
 Identities = 36/99 (36%), Positives = 54/99 (54%)

Query: 7   ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
           + KF  AV I+Q+LPK GPI+   +  L FY  +KQAT G  N  +P   D   K KWDA
Sbjct: 5   KAKFDKAVEIVQSLPKDGPIKPTQDEQLYFYKYFKQATVGDVNISRPGLMDFTGKAKWDA 64

Query: 67  WTKLGDMSKEAAMQRYIDEFINIVDSTLGSDVEDMVKSL 105
           W  +   SKE A Q+Y+++ + I+      + +  +  +
Sbjct: 65  WKSVEGTSKEVAYQKYVEKLLEILKKADTEESKKYIAEI 103

>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens} Length = 106

 Score =  108 bits (270), Expect = 2e-30
 Identities = 43/90 (47%), Positives = 57/90 (63%)

Query: 1  MKMKERERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVR 60
              + +++F AAVS+IQNLPK+G  +     ML+FY+ YKQAT GP   P+P FWD + 
Sbjct: 3  SPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIG 62

Query: 61 KTKWDAWTKLGDMSKEAAMQRYIDEFINIV 90
          + KWDAW  LG MS+E AM  YI E   + 
Sbjct: 63 RYKWDAWNSLGKMSREEAMSAYITEMKLVA 92

>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens} Length = 119

 Score =  105 bits (263), Expect = 4e-29
 Identities = 44/90 (48%), Positives = 60/90 (66%)

Query: 3   MKERERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKT 62
               E +F AAV +IQ+LPK+G  Q     ML+FY+ YKQATEGP    +P FWD + + 
Sbjct: 21  QSMHETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRY 80

Query: 63  KWDAWTKLGDMSKEAAMQRYIDEFINIVDS 92
           KWDAW+ LGDM+KE AM  Y++E   I+++
Sbjct: 81  KWDAWSSLGDMTKEEAMIAYVEEMKKIIET 110

>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A Length = 87

 Score = 99.5 bits (248), Expect = 3e-27
 Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 4/78 (5%)

Query: 7  ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
          + +F  A   +++L      +     ML  Y  YKQAT G  N  +P   D   K KWDA
Sbjct: 3  QAEFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDA 58

Query: 67 WTKLGDMSKEAAMQRYID 84
          W +L   SKE AM+ YI+
Sbjct: 59 WNELKGTSKEDAMKAYIN 76

>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis} Length = 96

 Score = 99.6 bits (248), Expect = 3e-27
 Identities = 29/78 (37%), Positives = 37/78 (47%), Gaps = 3/78 (3%)

Query: 7  ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
             F AAV  + N           +  L FY  YKQAT G  N+PKP    +  K KW+A
Sbjct: 11 ADDFDAAVKYVSNTTTMMA---SNDDKLCFYKYYKQATVGDCNKPKPGMLQLQEKYKWEA 67

Query: 67 WTKLGDMSKEAAMQRYID 84
          W  L  MS E+A + Y+ 
Sbjct: 68 WNALRGMSTESAKEAYVK 85

>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1 Length = 89

 Score = 99.2 bits (247), Expect = 4e-27
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%)

Query: 7  ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
           + F   VS I  LP++     P    L  Y  YKQ+T G  N  +P+    + + K++A
Sbjct: 3  AQVFEECVSFINGLPRTI--NLPNELKLDLYKYYKQSTIGNCNIKEPSAHKYIDRKKYEA 60

Query: 67 WTKLGDMSKEAAMQRYID 84
          W  + ++++E A +RY+D
Sbjct: 61 WKSVENLNREDAQKRYVD 78

>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 116

 Score = 99.7 bits (248), Expect = 7e-27
 Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 4/84 (4%)

Query: 1  MKMKERERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVR 60
            M+  ++ F  +++ ++ L K           L+ YALYKQATEGP N PKP  +D++ 
Sbjct: 11 TAMRASQKDFENSMNQVKLLKK----DPGNEVKLKLYALYKQATEGPCNMPKPGVFDLIN 66

Query: 61 KTKWDAWTKLGDMSKEAAMQRYID 84
          K KWDAW  LG + KEAA Q Y+D
Sbjct: 67 KAKWDAWNALGSLPKEAARQNYVD 90

>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae} Length = 86

 Score = 96.9 bits (241), Expect = 3e-26
 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 4/78 (5%)

Query: 7  ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
           + F      +  LP     +   + +L+ YALYKQAT G N++ KP  +++  + KW+A
Sbjct: 2  SQLFEEKAKAVNELPT----KPSTDELLELYALYKQATVGDNDKEKPGIFNMKDRYKWEA 57

Query: 67 WTKLGDMSKEAAMQRYID 84
          W  L   S+E A + YI 
Sbjct: 58 WENLKGKSQEDAEKEYIA 75

>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} Length = 89

 Score = 95.3 bits (237), Expect = 1e-25
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 4/78 (5%)

Query: 7  ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
          +  F  A   ++ L      +     + + Y LYKQA  G  N   P   D+  K KW+A
Sbjct: 5  QADFDRAAEDVRKLKA----RPDDGELKELYGLYKQAIVGDINIACPGMLDLKGKAKWEA 60

Query: 67 WTKLGDMSKEAAMQRYID 84
          W     +S E A   YI 
Sbjct: 61 WNLKKGLSTEDATSAYIS 78

>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 109

 Score = 89.7 bits (222), Expect = 3e-23
 Identities = 31/84 (36%), Positives = 38/84 (45%), Gaps = 4/84 (4%)

Query: 1  MKMKERERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVR 60
                   F  A + +Q L +          +L  YA YKQ   G  N PKP+F+D   
Sbjct: 3  SGSSGLAELFEKAAAHLQGLIQ----VASREQLLYLYARYKQVKVGNCNTPKPSFFDFEG 58

Query: 61 KTKWDAWTKLGDMSKEAAMQRYID 84
          K KW+AW  LGD S   AMQ YI 
Sbjct: 59 KQKWEAWKALGDSSPSQAMQEYIA 82

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 6e-05
 Identities = 26/219 (11%), Positives = 63/219 (28%), Gaps = 54/219 (24%)

Query: 4   KERERKFYAAVSI-IQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKT 62
            E +      +    Q+LP+      P    +      +   +G                
Sbjct: 301 DEVKSLLLKYLDCRPQDLPREVLTTNPRRLSI-IAESIR---DGLA-------------- 342

Query: 63  KWDAWTKLGDMSKEAAMQRYIDEFINIVDST--------LG---SDVEDMVKSLGTLYEA 111
            WD W  +        +   I+  +N+++          L             L  ++  
Sbjct: 343 TWDNWKHVNCD----KLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFD 398

Query: 112 VNNEDIDLLLGPTMDKLFARTGSKKLAQLKDKVLKSRDIDDLSRTDTSIHDLSRTE--NK 169
           V   D+ ++    ++KL        L + K     +  I  +   +  +   +       
Sbjct: 399 VIKSDVMVV----VNKLH----KYSLVE-KQPKESTISIPSIYL-ELKVKLENEYALHRS 448

Query: 170 LSEYYAAAPA--NGDIM--RED---LTH-AYQLRNADKG 200
           + ++Y       + D++    D    +H  + L+N +  
Sbjct: 449 IVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHP 487

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	250
3fp5_A	106	Acyl-COA binding protein; ACBP, cacao disease, fat	100.0
3flv_A	119	Acyl-COA-binding domain-containing protein 5; lipi	100.0
3epy_A	89	Acyl-COA-binding domain-containing protein 7; acyl	100.0
1hbk_A	89	ACBP, acyl-COA binding protein; fatty acid metabol	100.0
2wh5_A	106	Acyl-COA-binding domain-containing protein 4; alte	100.0
1st7_A	86	ACBP, acyl-COA-binding protein; four helix bundle,	100.0
2cqu_A	116	Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA bi	99.98
2cop_A	109	Acyl-coenzyme A binding domain containing 6; acyl	99.98
2cb8_A	87	Acyl-COA-binding protein; acyl-coenzyme A binding	99.98
2lbb_A	96	Acyl COA binding protein; protein binding, structu	99.97
1mix_A	206	Talin; focal adhesion, integrin binding, FERM doma	98.46
4f7g_A	222	Talin-1; alpha-helix bundle, integrin activation,	96.13
1ef1_A	294	Moesin; membrane, FERM domain, tail domain, membra	95.95
1h4r_A	314	Merlin; FERM, neurofibromatosis, NF2, structural p	95.88
3qij_A	296	Protein 4.1; cytoskeleton, structural genomics, st	95.57
3ivf_A	371	Talin-1; FERM domain, cell membrane, cell projecti	95.35
2i1j_A	575	Moesin; FERM, coiled-coil, C-ermad, ERM, radixin,	93.86
3au4_A	555	Myosin-X; protein-protein complex, motor protein c	92.88
4dxa_B	322	KREV interaction trapped protein 1; GTPase, FERM,	91.85
2al6_A	375	Focal adhesion kinase 1; transferase; 2.35A {Gallu	84.75

>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} SCOP: a.11.1.0

Probab=100.00  E-value=3e-36  Score=240.52  Aligned_cols=104  Identities=35%  Similarity=0.647  Sum_probs=99.5

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHHHH
Q psy15968          4 KERERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYI   83 (250)
Q Consensus         4 ~sLEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~YI   83 (250)
                      |+++++|++|+++|++++++|+.+|+++++|+|||||||||+|||+.++||+||+++|+||+||++++|||++|||++||
T Consensus         2 ~~~~~~F~~A~~~vk~l~~~g~~~ps~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gmS~eeA~~~YI   81 (106)
T 3fp5_A            2 HMSKAKFDKAVEIVQSLPKDGPIKPTQDEQLYFYKYFKQATVGDVNISRPGLMDFTGKAKWDAWKSVEGTSKEVAYQKYV   81 (106)
T ss_dssp             CCCHHHHHHHHHHHHHCCSSSSSCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHhcccccCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCccchHHHHHHHHHHHccCCCHHHHHHHHH
Confidence            35699999999999999998888999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCchhHHHHHHhhhh
Q psy15968         84 DEFINIVDSTLGSDVEDMVKSLGT  107 (250)
Q Consensus        84 ellekLl~k~~t~~~~~~l~~~~~  107 (250)
                      ++++++++++.+++++++|..|+.
T Consensus        82 ~~v~~l~~~~~~~~~~~~~~~le~  105 (106)
T 3fp5_A           82 EKLLEILKKADTEESKKYIAEIEA  105 (106)
T ss_dssp             HHHHHHHHHHCSHHHHHHHHHHHH
T ss_pred             HHHHHHhcccCcHHHHHHHHHHhc
Confidence            999999999999999999998763

>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens}

Probab=100.00  E-value=1e-35  Score=242.08  Aligned_cols=97  Identities=47%  Similarity=0.895  Sum_probs=89.3

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHHH
Q psy15968          3 MKERERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRY   82 (250)
Q Consensus         3 m~sLEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~Y   82 (250)
                      |.+|+++|++|+++|++++.+|+++|+++++|+|||||||||+|||+.++|++||+++|+||+||++++|||++|||++|
T Consensus        21 ~~dLe~~F~~A~~~Vk~l~~~g~~~ps~d~~L~LYaLyKQAT~Gd~~~~~Pg~~d~~graKw~AW~~l~gmS~eeAm~~Y  100 (119)
T 3flv_A           21 QSMHETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSSLGDMTKEEAMIAY  100 (119)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhCcccCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCccCHHHHHHHHHHHHccCCCHHHHHHHH
Confidence            77899999999999999998888889999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcC-CCchhHH
Q psy15968         83 IDEFINIVDS-TLGSDVE   99 (250)
Q Consensus        83 IellekLl~k-~~t~~~~   99 (250)
                      |+++++|+++ +.+++++
T Consensus       101 I~~v~~l~~~~~~~~~~~  118 (119)
T 3flv_A          101 VEEMKKIIETMPMTEKVE  118 (119)
T ss_dssp             HHHHHHHHHHSCC-----
T ss_pred             HHHHHHHHhhCCCCcccc
Confidence            9999999999 9999875

>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1

Probab=100.00  E-value=3.2e-34  Score=222.07  Aligned_cols=85  Identities=27%  Similarity=0.460  Sum_probs=82.0

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHHHH
Q psy15968          4 KERERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYI   83 (250)
Q Consensus         4 ~sLEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~YI   83 (250)
                      |+|+++|++|+++|+.++.    +|+++++|+|||||||||+|||++++|++||+++|+||+||++++|||++|||++||
T Consensus         2 m~L~~~F~~A~~~vk~l~~----~p~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~g~s~eeA~~~Yi   77 (89)
T 3epy_A            2 MALQADFDRAAEDVRKLKA----RPDDGELKELYGLYKQAIVGDINIACPGMLDLKGKAKWEAWNLKKGLSTEDATSAYI   77 (89)
T ss_dssp             CHHHHHHHHHHHHGGGCSS----CCCHHHHHHHHHHHHHHHTCSCCSCCTTTTCHHHHHHHHHHHTTTTCCHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHcCC----CcCHHHHHHHHHHHHHHhhCCCCCCCCcccchHHHHHHHHHHHhhCCCHHHHHHHHH
Confidence            4699999999999999986    799999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcC
Q psy15968         84 DEFINIVDS   92 (250)
Q Consensus        84 ellekLl~k   92 (250)
                      +++++++++
T Consensus        78 ~~v~~l~~k   86 (89)
T 3epy_A           78 SKAKELIEK   86 (89)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHhhh
Confidence            999999876

>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1

Probab=100.00  E-value=1.3e-33  Score=217.89  Aligned_cols=85  Identities=31%  Similarity=0.559  Sum_probs=81.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHHHHHH
Q psy15968          6 RERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYIDE   85 (250)
Q Consensus         6 LEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~YIel   85 (250)
                      |+++|++|+++|++++.  ..+|+++++|+|||||||||+|||++++||+||+++|+||+||++++|||++|||++||++
T Consensus         2 l~~~F~~A~~~v~~l~~--~~~~~~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~YI~~   79 (89)
T 1hbk_A            2 MAQVFEECVSFINGLPR--TINLPNELKLDLYKYYKQSTIGNCNIKEPSAHKYIDRKKYEAWKSVENLNREDAQKRYVDI   79 (89)
T ss_dssp             HHHHHHHHHHHHHHSCT--TCCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTSHHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhcCC--cCCCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHhHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence            68999999999999984  2379999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcC
Q psy15968         86 FINIVDS   92 (250)
Q Consensus        86 lekLl~k   92 (250)
                      |++++++
T Consensus        80 v~~l~~~   86 (89)
T 1hbk_A           80 VSEIFPY   86 (89)
T ss_dssp             HHHHCTT
T ss_pred             HHHHccc
Confidence            9999886

>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}

Probab=100.00  E-value=8.7e-34  Score=226.17  Aligned_cols=90  Identities=48%  Similarity=0.882  Sum_probs=83.8

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHHH
Q psy15968          3 MKERERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRY   82 (250)
Q Consensus         3 m~sLEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~Y   82 (250)
                      ..+|+++|++|+++|++++.+|+++|+++++|+|||||||||+|||+.++|++||+++|+||+||++++|||++|||++|
T Consensus         5 ~~~l~~~F~~A~~~vk~l~~~g~~~ps~e~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~Y   84 (106)
T 2wh5_A            5 EPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAY   84 (106)
T ss_dssp             ----CHHHHHHHHHHHHSCSSCSCCCCHHHHHHHHHHHHHHHHCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence            34688999999999999999888899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcC
Q psy15968         83 IDEFINIVDS   92 (250)
Q Consensus        83 IellekLl~k   92 (250)
                      |+++++++++
T Consensus        85 I~~v~~l~~k   94 (106)
T 2wh5_A           85 ITEMKLVAQK   94 (106)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998876

>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.1e-34  Score=217.80  Aligned_cols=83  Identities=31%  Similarity=0.617  Sum_probs=80.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHHHHHH
Q psy15968          6 RERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYIDE   85 (250)
Q Consensus         6 LEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~YIel   85 (250)
                      |+++|++|+++|++++.    +|+++++|+|||||||||+|||++++||+||+++|+||+||++++|||++|||++||++
T Consensus         1 l~~~F~~A~~~v~~l~~----~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~eeA~~~YI~~   76 (86)
T 1st7_A            1 VSQLFEEKAKAVNELPT----KPSTDELLELYALYKQATVGDNDKEKPGIFNMKDRYKWEAWENLKGKSQEDAEKEYIAL   76 (86)
T ss_dssp             CHHHHHHHHHHHTSCSS----CCCHHHHHHHHHHHHHHHHCSCCCCCCCSSCHHHHHHHHHHHTTTTTHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHccC----CcCHHHHHHHHHHHHHHhhCCCCCCCCCccCHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence            57899999999999986    69999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcC
Q psy15968         86 FINIVDS   92 (250)
Q Consensus        86 lekLl~k   92 (250)
                      |++++++
T Consensus        77 v~~l~~~   83 (86)
T 1st7_A           77 VDQLIAK   83 (86)
T ss_dssp             HHHHHHH
T ss_pred             HHHHhhh
Confidence            9999875

>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.98  E-value=6.3e-33  Score=224.49  Aligned_cols=87  Identities=43%  Similarity=0.762  Sum_probs=83.8

Q ss_pred             CchhHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHH
Q psy15968          2 KMKERERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQR   81 (250)
Q Consensus         2 ~m~sLEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~   81 (250)
                      .|++++++|++|+++|+.++.    .|+++++|+|||||||||+|||+.++|++||+++|+||+||++++|||++|||++
T Consensus        12 ~m~~~~~~F~~A~~~vk~l~~----~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graKw~AW~~l~gms~eeAm~~   87 (116)
T 2cqu_A           12 AMRASQKDFENSMNQVKLLKK----DPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGSLPKEAARQN   87 (116)
T ss_dssp             SCCCCHHHHHHHHHHHHHCCS----CCCHHHHHHHHHHHTTTTTCSCCSCCCCTTCHHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHccC----CCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHHhcCCCHHHHHHH
Confidence            477789999999999999997    6899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcC
Q psy15968         82 YIDEFINIVDS   92 (250)
Q Consensus        82 YIellekLl~k   92 (250)
                      ||++|++++++
T Consensus        88 YI~lv~~l~~~   98 (116)
T 2cqu_A           88 YVDLVSSLSPS   98 (116)
T ss_dssp             HHHHHHHHCSC
T ss_pred             HHHHHHHHccc
Confidence            99999999987

>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.98  E-value=5.8e-33  Score=222.09  Aligned_cols=86  Identities=36%  Similarity=0.570  Sum_probs=82.8

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHHH
Q psy15968          3 MKERERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRY   82 (250)
Q Consensus         3 m~sLEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~Y   82 (250)
                      +.+|+++|++|+++|+.++.    +|+++++|+|||||||||+|||++++|++||+++|+||+||++++|||++|||++|
T Consensus         5 ~~~l~~~F~~A~~~vk~l~~----~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~eeAm~~Y   80 (109)
T 2cop_A            5 SSGLAELFEKAAAHLQGLIQ----VASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDSSPSQAMQEY   80 (109)
T ss_dssp             CCCSHHHHHHHHHHHTTSTT----TSCHHHHHHHHHHHHHHHTCSCCSCCCCSSCHHHHHHHHHHHSCTTCCHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHccc----CCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence            56789999999999999986    69999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcC
Q psy15968         83 IDEFINIVDS   92 (250)
Q Consensus        83 IellekLl~k   92 (250)
                      |++|++++++
T Consensus        81 I~lv~~l~~~   90 (109)
T 2cop_A           81 IAVVKKLDPG   90 (109)
T ss_dssp             HHHHHHHCTT
T ss_pred             HHHHHHHhhh
Confidence            9999999987

>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A

Probab=99.98  E-value=7.6e-33  Score=213.19  Aligned_cols=82  Identities=35%  Similarity=0.590  Sum_probs=79.5

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy15968          7 ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYIDEF   86 (250)
Q Consensus         7 Ee~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~YIell   86 (250)
                      +++|++|+++|++++.    +|+++++|+|||||||||+|||++++||+||+++|+||+||++++|||++|||++||+++
T Consensus         3 ~~~F~~A~~~vk~l~~----~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~Yi~~v   78 (87)
T 2cb8_A            3 QAEFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKV   78 (87)
T ss_dssp             HHHHHHHHHHGGGCSS----CCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHccC----CcCHHHHHHHHHHHHhhhhCCCCCCCCCcccHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence            7899999999999986    699999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcC
Q psy15968         87 INIVDS   92 (250)
Q Consensus        87 ekLl~k   92 (250)
                      ++++++
T Consensus        79 ~~l~~~   84 (87)
T 2cb8_A           79 EELKKK   84 (87)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999875

>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis}

Probab=99.97  E-value=5.6e-32  Score=212.68  Aligned_cols=82  Identities=37%  Similarity=0.607  Sum_probs=78.3

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy15968          8 RKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYIDEFI   87 (250)
Q Consensus         8 e~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~YIelle   87 (250)
                      ++|++|++.|+++++   .+|+++++|+|||||||||+|||++++||+||+++|+||+||++++|||++|||++||++|+
T Consensus        12 ~~F~~A~~~vk~l~~---~~ps~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graKw~AW~~l~gmS~eeAm~~YI~lv~   88 (96)
T 2lbb_A           12 DDFDAAVKYVSNTTT---MMASNDDKLCFYKYYKQATVGDCNKPKPGMLQLQEKYKWEAWNALRGMSTESAKEAYVKLLD   88 (96)
T ss_dssp             STHHHHHHHHHHCCC---SCCCTTTTTHHHHHHHHTTTSSCCCCCCCSSCSHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCC---CCCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHhHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence            569999999999993   27999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcC
Q psy15968         88 NIVDS   92 (250)
Q Consensus        88 kLl~k   92 (250)
                      +++++
T Consensus        89 ~l~~~   93 (96)
T 2lbb_A           89 TLAPS   93 (96)
T ss_dssp             HHCGG
T ss_pred             HHhch
Confidence            99886

>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B

Probab=98.46  E-value=7.4e-07  Score=73.88  Aligned_cols=80  Identities=24%  Similarity=0.333  Sum_probs=64.9

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCC--CCCCcchh------------HHHHHHHHHhcC
Q psy15968          6 RERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQP--KPAFWDIV------------RKTKWDAWTKLG   71 (250)
Q Consensus         6 LEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~--rPg~fD~v------------gRaKWdAWk~Lk   71 (250)
                      +.--|..+...|-.    |.+..+.++-++|.||..||..||++..  .|+++++.            .+..+++|++++
T Consensus        18 ~~l~y~Q~~~dil~----g~~~~~~~~a~~Laal~~qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~i~~~~~~~~   93 (206)
T 1mix_A           18 LNLLYVQARDDILN----GSHPVSFDKACEFAGYQCQIQFGPHNEQKHKPGFLELKDFLPKEYIKQKGERKIFMAHKNCG   93 (206)
T ss_dssp             HHHHHHHHHHHHHT----TSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGSTTCCHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHC----CccccCHHHHHHHHHHhhhheecCCCcccccCCccchHhhCCHHHhhcccHHHHHHHHHHcc
Confidence            34456666666654    3456899999999999999999999864  46665544            677899999999


Q ss_pred             CCCHHHHHHHHHHHHHHh
Q psy15968         72 DMSKEAAMQRYIDEFINI   89 (250)
Q Consensus        72 GMSkEEAm~~YIellekL   89 (250)
                      |||++||+.+|++++.++
T Consensus        94 g~s~~~A~~~yL~~~~~l  111 (206)
T 1mix_A           94 NMSEIEAKVRYVKLARSL  111 (206)
T ss_dssp             TCCHHHHHHHHHHHHHHS
T ss_pred             CCCHHHHHHHHHHHHHhC
Confidence            999999999999999875

>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}

Probab=96.13  E-value=0.037  Score=46.68  Aligned_cols=80  Identities=24%  Similarity=0.323  Sum_probs=57.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCC--CCCCcch------------hHHHHHHHHHhcC
Q psy15968          6 RERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQP--KPAFWDI------------VRKTKWDAWTKLG   71 (250)
Q Consensus         6 LEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~--rPg~fD~------------vgRaKWdAWk~Lk   71 (250)
                      +.--|..+...|-.    |.+..+.++-++|=||-=||..||++..  .++++++            ..+.=.+.|++++
T Consensus        29 l~l~ylQ~~~dil~----G~~~~~~e~a~~LAal~~Qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~~~~~I~~~h~~~~  104 (222)
T 4f7g_A           29 LNLLYVQARDDILN----GSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCG  104 (222)
T ss_dssp             HHHHHHHHHHHHHT----TSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCSSCSCGGGTSCGGGGGGCCHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHhC----CcccCCHHHHHHHHHHHHHHHHCCCCchhcccCccchhhccCHHHHhhhhHHHHHHHHHhcc
Confidence            33345555555543    3456789999999999999999999853  2332221            1122257899999


Q ss_pred             CCCHHHHHHHHHHHHHHh
Q psy15968         72 DMSKEAAMQRYIDEFINI   89 (250)
Q Consensus        72 GMSkEEAm~~YIellekL   89 (250)
                      |||++||+.+|++++.++
T Consensus       105 g~s~~eA~~~yL~~~~~l  122 (222)
T 4f7g_A          105 QMSEIEAKVRYVKLARSL  122 (222)
T ss_dssp             TCCHHHHHHHHHHHHHTS
T ss_pred             CCCHHHHHHHHHHHHhhc
Confidence            999999999999999875

>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A

Probab=95.95  E-value=0.023  Score=49.38  Aligned_cols=76  Identities=21%  Similarity=0.263  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCC--CCCCcc---hh-----H-----HHHH-----HHHH
Q psy15968          9 KFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQP--KPAFWD---IV-----R-----KTKW-----DAWT   68 (250)
Q Consensus         9 ~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~--rPg~fD---~v-----g-----RaKW-----dAWk   68 (250)
                      -|..+..-|-.    |.+..+.++-++|=||--||..||++..  .|++++   +.     .     ...|     +.|+
T Consensus        99 ~y~Q~~~dil~----g~~~~~~e~a~~Laal~~q~~~Gd~~~~~~~~~~l~~~~~lP~~~~~~~~~~~~~~~~~I~~~~~  174 (294)
T 1ef1_A           99 FFLQVKEGILN----DDIYCPPETAVLLASYAVQSKYGDFNKEVHKSGYLAGDKLLPQRVLEQHKLNKDQWEERIQVWHE  174 (294)
T ss_dssp             HHHHHHHHHHT----TSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHHHBCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHc----CcccCCHHHHHHHHHHHHHHHhCCCCccccChhhccccccCCHHHHhhcCCCHHHHHHHHHHHHH
Confidence            34555554443    3456789999999999999999999854  344421   11     1     1233     6899


Q ss_pred             hcCCCCHHHHHHHHHHHHHH
Q psy15968         69 KLGDMSKEAAMQRYIDEFIN   88 (250)
Q Consensus        69 ~LkGMSkEEAm~~YIellek   88 (250)
                      +++|||++||+.+|++++.+
T Consensus       175 ~~~g~s~~~A~~~yL~~~~~  194 (294)
T 1ef1_A          175 EHRGMLREDAVLEYLKIAQD  194 (294)
T ss_dssp             HTTTCCHHHHHHHHHHHHTT
T ss_pred             HccCCCHHHHHHHHHHHHcc
Confidence            99999999999999999986

>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A

Probab=95.88  E-value=0.027  Score=49.69  Aligned_cols=76  Identities=14%  Similarity=0.170  Sum_probs=55.0

Q ss_pred             HHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCC--CCCCcc---h---------------hHHHHHHHHHh
Q psy15968         10 FYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQP--KPAFWD---I---------------VRKTKWDAWTK   69 (250)
Q Consensus        10 Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~--rPg~fD---~---------------vgRaKWdAWk~   69 (250)
                      |..+..-|-.    |.+..+.++-++|=||--||..||++..  .|++++   +               ..+.=-+.|++
T Consensus       120 y~Q~~~dil~----g~~~~~~e~a~~Laal~~Qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~~~~~~~I~~~~~~  195 (314)
T 1h4r_A          120 FLQVKKQILD----EKIYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMTPEMWEERITAWYAE  195 (314)
T ss_dssp             HHHHHHHHHT----TSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHTTSCCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhC----CCccCCHHHHHHHHHHHHHHHHCCCCccccchhhcchhhcCCHHHHhhccCCHHHHHHHHHHHHHH
Confidence            4444444433    3446799999999999999999999854  344321   1               11222478999


Q ss_pred             cCCCCHHHHHHHHHHHHHHh
Q psy15968         70 LGDMSKEAAMQRYIDEFINI   89 (250)
Q Consensus        70 LkGMSkEEAm~~YIellekL   89 (250)
                      +.|||++||+.+|++++.++
T Consensus       196 ~~g~s~~eA~~~yL~~~~~l  215 (314)
T 1h4r_A          196 HRGRARDEAEMEYLKIAQDL  215 (314)
T ss_dssp             TTTCCHHHHHHHHHHHHTTS
T ss_pred             cCCCCHHHHHHHHHHHHhcc
Confidence            99999999999999999773

>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A

Probab=95.57  E-value=0.024  Score=50.28  Aligned_cols=78  Identities=9%  Similarity=0.084  Sum_probs=55.7

Q ss_pred             HHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCC--CCCCcc----------hhHHHHHHHHHhcCCCCHHH
Q psy15968         10 FYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQP--KPAFWD----------IVRKTKWDAWTKLGDMSKEA   77 (250)
Q Consensus        10 Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~--rPg~fD----------~vgRaKWdAWk~LkGMSkEE   77 (250)
                      |..+..-|-.    |.+..+.++-+.|=||-=||..||++..  .|+++.          -..+.=-++|++++|||++|
T Consensus       114 ylQ~~~dil~----G~~~c~~e~a~~LAAl~~Qae~Gd~~~~~~~~~yl~~~~~~P~~~~~~~~~I~~~h~~~~g~s~~e  189 (296)
T 3qij_A          114 CLQLRQDIVA----GRLPCSFATLALLGSYTIQSELGDYDPELHGVDYVSDFKLAPNQTKELEEKVMELHKSYRSMTPAQ  189 (296)
T ss_dssp             HHHHHHHHHH----TSSCCCHHHHHHHHHHHHHHHHCSCCHHHHTTCCCTTSCCSSSCCHHHHHHHHHHHHTCCSCCHHH
T ss_pred             HHHHHHHHHc----CCCCCCHHHHHHHHHHHHHHhcCCCCccccchhhCcHhhcCCcCHHHHHHHHHHHHHHccCCCHHH
Confidence            4444444433    3446789999999999999999999732  233221          12233357899999999999


Q ss_pred             HHHHHHHHHHHhhcC
Q psy15968         78 AMQRYIDEFINIVDS   92 (250)
Q Consensus        78 Am~~YIellekLl~k   92 (250)
                      |+.+|++++.+ ++.
T Consensus       190 A~~~yL~~a~~-l~~  203 (296)
T 3qij_A          190 ADLEFLENAKK-LSM  203 (296)
T ss_dssp             HHHHHHHHHTT-STT
T ss_pred             HHHHHHHHHhc-ccc
Confidence            99999999988 444

>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A

Probab=95.35  E-value=0.079  Score=47.91  Aligned_cols=77  Identities=25%  Similarity=0.350  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCC--CCCcc---h--------h-HHHHHHHHHhcCCCC
Q psy15968          9 KFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPK--PAFWD---I--------V-RKTKWDAWTKLGDMS   74 (250)
Q Consensus         9 ~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~r--Pg~fD---~--------v-gRaKWdAWk~LkGMS   74 (250)
                      -|..+..-|-.    |.+..+.++-++|=||.=||..||++...  +++++   +        . .+.=-++|++++|||
T Consensus       186 ~y~Q~~~dil~----G~~~c~~e~a~~LAAl~~qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~~e~~I~~~~~~~~g~s  261 (371)
T 3ivf_A          186 LYVQARDDILN----GSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCGQMS  261 (371)
T ss_dssp             HHHHHHHHHHT----SSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGTTSCHHHHHHHHHHHTTTCC
T ss_pred             HHHHhhHHHhC----ceeecCHHHHHHHHHHHHHHHhCCCChhhcccchhcccccCCHHHhCchHHHHHHHHHHHccCCC
Confidence            34555554443    44567899999999999999999998542  33221   1        1 222357899999999


Q ss_pred             HHHHHHHHHHHHHHh
Q psy15968         75 KEAAMQRYIDEFINI   89 (250)
Q Consensus        75 kEEAm~~YIellekL   89 (250)
                      ++||+.+|++++.++
T Consensus       262 ~~eA~~~yL~~~~~l  276 (371)
T 3ivf_A          262 EIEAKVRYVKLARSL  276 (371)
T ss_dssp             HHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHhcc
Confidence            999999999999874

>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A

Probab=93.86  E-value=0.16  Score=49.59  Aligned_cols=76  Identities=22%  Similarity=0.432  Sum_probs=55.6

Q ss_pred             HHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCC--CCCCc---chhH----------HHHH-----HHHHh
Q psy15968         10 FYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQP--KPAFW---DIVR----------KTKW-----DAWTK   69 (250)
Q Consensus        10 Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~--rPg~f---D~vg----------RaKW-----dAWk~   69 (250)
                      |..+..-|-.    |.+..+.++-+.|=||--||..||++..  .|+++   .++-          ...|     ..|++
T Consensus       103 YlQvk~dIl~----G~l~c~~e~a~~LAAL~lQae~GDy~~~~~~~~yl~~~~~lP~~vl~~~~~s~e~~~~~I~~~hk~  178 (575)
T 2i1j_A          103 YLQVKNAILS----DEIYCPPETSVLLASYAVQARHGDHNPAVHGPGFLANDRLLPQRVTDQHKMSREEWEQSITNWWQE  178 (575)
T ss_dssp             HHHHHHHHHT----TSSCCCHHHHHHHHHHHHHHHHCSCCTTTCCTTTTTTCCCSCHHHHHTBCCCHHHHHHHHHHHHGG
T ss_pred             HHHHHHHHhC----CCCCCCHHHHHHHHHHHHHHHhcCCChhhcccccccccccCCHHHHhhcCCCHHHHHHHHHHHHHH
Confidence            4444444433    4456789999999999999999999854  34443   1111          1234     67999


Q ss_pred             cCCCCHHHHHHHHHHHHHHh
Q psy15968         70 LGDMSKEAAMQRYIDEFINI   89 (250)
Q Consensus        70 LkGMSkEEAm~~YIellekL   89 (250)
                      +.|||+.+|+..|++++.++
T Consensus       179 l~G~s~~eA~~~yL~~a~~l  198 (575)
T 2i1j_A          179 HRGMLREDAMMEYLKIAQDL  198 (575)
T ss_dssp             GTTCCHHHHHHHHHHHHTTS
T ss_pred             ccCCCHHHHHHHHHHHHHhc
Confidence            99999999999999999874

>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A

Probab=92.88  E-value=0.31  Score=46.45  Aligned_cols=80  Identities=21%  Similarity=0.269  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCC--CCCcch------hH-----------------
Q psy15968          6 RERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPK--PAFWDI------VR-----------------   60 (250)
Q Consensus         6 LEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~r--Pg~fD~------vg-----------------   60 (250)
                      +.--|..+..-|-.    |.+..+.++-+.|=||--|+..||++...  +.+-++      ..                 
T Consensus       321 ~~lly~Q~~~dil~----G~~~~~~e~a~~LAAl~lQ~~~GD~~~~~~~~~l~~~lP~~~l~~~~~~~~k~~s~~~~~l~  396 (555)
T 3au4_A          321 FAFMFEQAHEAVIH----GHHPAPEENLQVLAALRLQYLQGDYTLHAAIPPLEEVYSLQRLKARISQSTKTFSFRTGSVV  396 (555)
T ss_dssp             HHHHHHHHHHHHHT----TCSCCCHHHHHHHHHHHHHHHHCSCCTTCCCCCGGGTSCCHHHHHHHHHTTCCEECCTTSCC
T ss_pred             HHhhHHHHHHHHHC----CCCCCCHHHHHHHHHHHHHHHcCCCccccchhhhhhhCCHHHhhhhhccccccccccccccc
Confidence            33456666666654    44567899999999999999999998532  111010      00                 


Q ss_pred             ---------HHH-------------HHHHHhcCCCCHHHHHHHHHHHHHHh
Q psy15968         61 ---------KTK-------------WDAWTKLGDMSKEAAMQRYIDEFINI   89 (250)
Q Consensus        61 ---------RaK-------------WdAWk~LkGMSkEEAm~~YIellekL   89 (250)
                               ...             .+.|++++|||++||+.+|++++.++
T Consensus       397 ~~~~~~~~~~~~W~~~~~~~~~~~I~~~~~~~~g~s~~eA~~~yL~~~~~l  447 (555)
T 3au4_A          397 RQKVEEEQMLDMWIKEEVSSARASIIDKWRKFQGMNQEQAMAKYMALIKEW  447 (555)
T ss_dssp             EECCCCHHHHHHHTHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTS
T ss_pred             cccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhC
Confidence                     112             36789999999999999999999875

>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A

Probab=91.85  E-value=0.24  Score=44.05  Aligned_cols=77  Identities=18%  Similarity=0.243  Sum_probs=53.4

Q ss_pred             HHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCC--CCCCCcc---h---------------hHHHHHHHHH
Q psy15968          9 KFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQ--PKPAFWD---I---------------VRKTKWDAWT   68 (250)
Q Consensus         9 ~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~--~rPg~fD---~---------------vgRaKWdAWk   68 (250)
                      -|..+..-|-.    |.+..+.++-..|=||--||..||++.  ..|++++   +               ....=.++|+
T Consensus       117 ~y~Q~~~dil~----G~~~c~~e~a~~LAAl~~q~e~Gd~~~~~~~~~~l~~~~l~~~lP~~~~~~~~~~~~~~I~~~h~  192 (322)
T 4dxa_B          117 LFDEARYNLLK----GFYTAPDAKLITLASLLLQIVYGNYESKKHKQGFLNEENLKSIVPVTKLKSKAPHWTNRILHEYK  192 (322)
T ss_dssp             HHHHHHHHHHH----TCCCCCHHHHHHHHHHHHHHHHCSCCHHHHSSSCSCHHHHTTTSCTTTTTTTGGGSHHHHHHHHH
T ss_pred             HHHHHHHHHHC----CcccCCHHHHHHHHHHHHHHHhCCCCcccccccccchhhhhhhCCHHHHhcCHHHHHHHHHHHHH
Confidence            35555555544    344678999999999999999999863  2344322   1               1123367899


Q ss_pred             hc---CCCCHH--HHHHHHHHHHHHh
Q psy15968         69 KL---GDMSKE--AAMQRYIDEFINI   89 (250)
Q Consensus        69 ~L---kGMSkE--EAm~~YIellekL   89 (250)
                      ++   .|||++  +|+.+|++++.++
T Consensus       193 ~~~~~~g~s~~~a~a~~~yL~~~~~l  218 (322)
T 4dxa_B          193 NLSTSEGVSKEMHHLQRMFLQNCWEI  218 (322)
T ss_dssp             HHHC--CCCCCHHHHHHHHHHHHHTS
T ss_pred             hcccccCCChhHHHHHHHHHHHHhcC
Confidence            99   999975  4699999999864

>2al6_A Focal adhesion kinase 1; transferase; 2.35A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 2j0m_A* 2aeh_A

Probab=84.75  E-value=1.1  Score=40.86  Aligned_cols=65  Identities=14%  Similarity=0.265  Sum_probs=47.6

Q ss_pred             CCChHHHHHHHHHhhccccCCCCCCCC----C------------Cc--ch--------hHHHHHHHHHhcCCCCHHHHHH
Q psy15968         27 QTPLNTMLQFYALYKQATEGPNNQPKP----A------------FW--DI--------VRKTKWDAWTKLGDMSKEAAMQ   80 (250)
Q Consensus        27 ~ps~d~kL~LYALYKQAT~GDcn~~rP----g------------~f--D~--------vgRaKWdAWk~LkGMSkEEAm~   80 (250)
                      ..+.++-+.|-+|=-|+..||++...+    .            ++  ++        ..+.=...|+++.|||++|||-
T Consensus       132 ~~~~e~al~LAaL~~q~~~gD~~~~~~~~k~~~~~l~k~~~l~~flP~~~~~~~~~~~~~k~I~~~~k~~~g~s~~eAk~  211 (375)
T 2al6_A          132 QVDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRFFPKSLLDSVKAKTLRKLIQQTFRQFANLNREESIL  211 (375)
T ss_dssp             TSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHTTCGGGTSCHHHHHSSCHHHHHHHHHHHHHTTTTCCHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHhhhccchhhcccCCHHHhhhcccHHHhCCHHHHHHhChHHHHHHHHHHHHHhhCCCHHHHHH
Confidence            468999999999999999999863211    0            10  11        1111257889999999999999


Q ss_pred             HHHHHHHHhhcC
Q psy15968         81 RYIDEFINIVDS   92 (250)
Q Consensus        81 ~YIellekLl~k   92 (250)
                      +|++++.+ ++.
T Consensus       212 ~yL~~~~~-l~~  222 (375)
T 2al6_A          212 KFFEILSP-VYR  222 (375)
T ss_dssp             HHHHHHTT-TCC
T ss_pred             HHHHHHhh-ccc
Confidence            99999988 444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	250
d1hbka_	89	a.11.1.1 (A:) Acyl-CoA binding protein {Plasmodium	7e-29
d1hb6a_	86	a.11.1.1 (A:) Acyl-CoA binding protein {Cow (Bos t	7e-26

>d1hbka_ a.11.1.1 (A:) Acyl-CoA binding protein {Plasmodium falciparum [TaxId: 5833]} Length = 89

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Acyl-CoA binding protein
family: Acyl-CoA binding protein
domain: Acyl-CoA binding protein
species: Plasmodium falciparum [TaxId: 5833]

 Score =  102 bits (256), Expect = 7e-29
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 7  ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
           + F   VS I  LP++  +  P    L  Y  YKQ+T G  N  +P+    + + K++A
Sbjct: 3  AQVFEECVSFINGLPRTINL--PNELKLDLYKYYKQSTIGNCNIKEPSAHKYIDRKKYEA 60

Query: 67 WTKLGDMSKEAAMQRYID 84
          W  + ++++E A +RY+D
Sbjct: 61 WKSVENLNREDAQKRYVD 78

>d1hb6a_ a.11.1.1 (A:) Acyl-CoA binding protein {Cow (Bos taurus) [TaxId: 9913]} Length = 86

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Acyl-CoA binding protein
family: Acyl-CoA binding protein
domain: Acyl-CoA binding protein
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 94.9 bits (236), Expect = 7e-26
 Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 4/78 (5%)

Query: 7  ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDA 66
          + +F  A   +++L      +     ML  Y+ YKQAT G  N  +P   D   K KWDA
Sbjct: 2  QAEFDKAAEEVKHLKT----KPADEEMLFIYSHYKQATVGDINTERPGMLDFKGKAKWDA 57

Query: 67 WTKLGDMSKEAAMQRYID 84
          W +L   SKE AM+ YID
Sbjct: 58 WNELKGTSKEDAMKAYID 75

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	250
d1hbka_	89	Acyl-CoA binding protein {Plasmodium falciparum [T	99.97
d1hb6a_	86	Acyl-CoA binding protein {Cow (Bos taurus) [TaxId:	99.97
d1h4ra1	111	Merlin {Human (Homo sapiens) [TaxId: 9606]}	97.72
d1gg3a1	106	Erythroid membrane protein 4.1R {Human (Homo sapie	97.66
d1ef1a1	111	Moesin {Human (Homo sapiens) [TaxId: 9606]}	97.66
d1mixa1	114	Talin {Chicken (Gallus gallus) [TaxId: 9031]}	97.62
d2al6a1	123	Focal adhesion kinase 1 {Chicken (Gallus gallus) [	94.96

>d1hbka_ a.11.1.1 (A:) Acyl-CoA binding protein {Plasmodium falciparum [TaxId: 5833]}

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Acyl-CoA binding protein
family: Acyl-CoA binding protein
domain: Acyl-CoA binding protein
species: Plasmodium falciparum [TaxId: 5833]

Probab=99.97  E-value=5e-32  Score=208.04  Aligned_cols=85  Identities=31%  Similarity=0.565  Sum_probs=81.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHHHHHH
Q psy15968          6 RERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYIDE   85 (250)
Q Consensus         6 LEe~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~YIel   85 (250)
                      |++.|++|+++|+++++.  ..++++++|+|||||||||+|||+.++|++||+++|+||+||++++|||++|||++||++
T Consensus         2 L~~~F~~A~~~v~~~~~~--~~~~~~~~L~lY~lyKQat~G~~~~~~P~~~~~~~~~Kw~AW~~l~gms~~eA~~~Yi~~   79 (89)
T d1hbka_           2 MAQVFEECVSFINGLPRT--INLPNELKLDLYKYYKQSTIGNCNIKEPSAHKYIDRKKYEAWKSVENLNREDAQKRYVDI   79 (89)
T ss_dssp             HHHHHHHHHHHHHHSCTT--CCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTSHHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCC--CCCCHHHHHHHHHHHHHHhcCCCCCCCCCccCHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence            789999999999999874  358999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcC
Q psy15968         86 FINIVDS   92 (250)
Q Consensus        86 lekLl~k   92 (250)
                      |++++|+
T Consensus        80 v~~l~p~   86 (89)
T d1hbka_          80 VSEIFPY   86 (89)
T ss_dssp             HHHHCTT
T ss_pred             HHHHccc
Confidence            9999886

>d1hb6a_ a.11.1.1 (A:) Acyl-CoA binding protein {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Acyl-CoA binding protein
family: Acyl-CoA binding protein
domain: Acyl-CoA binding protein
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=7.9e-32  Score=205.47  Aligned_cols=82  Identities=37%  Similarity=0.595  Sum_probs=79.2

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCCCCCCcchhHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy15968          7 ERKFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQPKPAFWDIVRKTKWDAWTKLGDMSKEAAMQRYIDEF   86 (250)
Q Consensus         7 Ee~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~rPg~fD~vgRaKWdAWk~LkGMSkEEAm~~YIell   86 (250)
                      +++|+.|+++|++++.    +|+++++|+|||||||||+|||+.++|++||+++|+||+||++++|||++|||++||+++
T Consensus         2 ~~~F~~A~~~v~~~~~----~~~~~~~L~LYalyKQat~Gd~~~~~P~~~~~~~~aKw~AW~~~~gms~~eA~~~YI~~v   77 (86)
T d1hb6a_           2 QAEFDKAAEEVKHLKT----KPADEEMLFIYSHYKQATVGDINTERPGMLDFKGKAKWDAWNELKGTSKEDAMKAYIDKV   77 (86)
T ss_dssp             HHHHHHHHHHGGGCSS----CCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCC----CcCHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence            6789999999999987    689999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcC
Q psy15968         87 INIVDS   92 (250)
Q Consensus        87 ekLl~k   92 (250)
                      ++++++
T Consensus        78 ~~l~~k   83 (86)
T d1hb6a_          78 EELKKK   83 (86)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999876

>d1h4ra1 a.11.2.1 (A:104-214) Merlin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Second domain of FERM
family: Second domain of FERM
domain: Merlin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=3.5e-05  Score=57.59  Aligned_cols=66  Identities=15%  Similarity=0.258  Sum_probs=50.8

Q ss_pred             CCCCCChHHHHHHHHHhhccccCCCCCC--CCCCcc---hh----------HHHHH-----HHHHhcCCCCHHHHHHHHH
Q psy15968         24 GPIQTPLNTMLQFYALYKQATEGPNNQP--KPAFWD---IV----------RKTKW-----DAWTKLGDMSKEAAMQRYI   83 (250)
Q Consensus        24 G~~~ps~d~kL~LYALYKQAT~GDcn~~--rPg~fD---~v----------gRaKW-----dAWk~LkGMSkEEAm~~YI   83 (250)
                      |.+..+.++-..|-||.-||.+||++..  .+++++   +.          ....|     ..|+.++|||+.+|+..|+
T Consensus        26 G~~~~~~~~a~~LAal~~Qae~GD~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~I~~~hk~l~G~s~~~A~~~yL  105 (111)
T d1h4ra1          26 EKIYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMTPEMWEERITAWYAEHRGRARDEAEMEYL  105 (111)
T ss_dssp             TSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHTTSCCCHHHHHHHHHHHHHTTTTCCHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHhCCCChhhcccchhhhhhcCCchHHHHhhccHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence            5567899999999999999999999854  333321   11          11233     4799999999999999999


Q ss_pred             HHHHHh
Q psy15968         84 DEFINI   89 (250)
Q Consensus        84 ellekL   89 (250)
                      +++.++
T Consensus       106 ~~~~~L  111 (111)
T d1h4ra1         106 KIAQDL  111 (111)
T ss_dssp             HHHTTS
T ss_pred             HHHhhC
Confidence            998764

>d1gg3a1 a.11.2.1 (A:82-187) Erythroid membrane protein 4.1R {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Second domain of FERM
family: Second domain of FERM
domain: Erythroid membrane protein 4.1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=7e-05  Score=55.70  Aligned_cols=66  Identities=9%  Similarity=0.136  Sum_probs=51.9

Q ss_pred             CCCCCChHHHHHHHHHhhccccCCCCCC--CCCCcc----------hhHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Q psy15968         24 GPIQTPLNTMLQFYALYKQATEGPNNQP--KPAFWD----------IVRKTKWDAWTKLGDMSKEAAMQRYIDEFINI   89 (250)
Q Consensus        24 G~~~ps~d~kL~LYALYKQAT~GDcn~~--rPg~fD----------~vgRaKWdAWk~LkGMSkEEAm~~YIellekL   89 (250)
                      |.+.++.++-..|-||--||..||++..  .++++.          -....=-..|++++|||+++|+.+|++++.++
T Consensus        26 G~~~~~~~~a~~Laal~~Qae~GD~~~~~~~~~yl~~~~~~p~~~~~~~~~I~~~h~~l~G~s~~~A~~~fL~~~~~l  103 (106)
T d1gg3a1          26 GRLPCSFATLALLGSYTIQSELGDYDPELHGVDYVSDFKLAPNQTKELEEKVMELHKSYRSMTPAQADLEFLENAKKL  103 (106)
T ss_dssp             TSSCCCHHHHHHHHHHHHHHHHCSCCTTSCSSCCGGGSCCCSSCCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHS
T ss_pred             cccCCCHHHHHHHHHHHHHHHhCCCCccccchhhhhHHhcCCccHHHHHHHHHHHHHHccCcCHHHHHHHHHHHHhcC
Confidence            4567899999999999999999999854  233321          12223357899999999999999999999875

>d1ef1a1 a.11.2.1 (A:88-198) Moesin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Second domain of FERM
family: Second domain of FERM
domain: Moesin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=5.7e-05  Score=56.52  Aligned_cols=66  Identities=17%  Similarity=0.124  Sum_probs=51.3

Q ss_pred             CCCCCChHHHHHHHHHhhccccCCCCCC--CCCCcch------------------hHHHHHHHHHhcCCCCHHHHHHHHH
Q psy15968         24 GPIQTPLNTMLQFYALYKQATEGPNNQP--KPAFWDI------------------VRKTKWDAWTKLGDMSKEAAMQRYI   83 (250)
Q Consensus        24 G~~~ps~d~kL~LYALYKQAT~GDcn~~--rPg~fD~------------------vgRaKWdAWk~LkGMSkEEAm~~YI   83 (250)
                      |.+..+.++-..|-||.-||..||++..  .++++..                  ..+.=.+.|++++|||+.+|+..|+
T Consensus        26 G~~~~~~~~a~~Laal~~Qae~GD~~~~~~~~~~l~~~~~lP~~~~~~~~~~~~~~~~~I~~~h~~l~g~s~~~A~~~fL  105 (111)
T d1ef1a1          26 DDIYCPPETAVLLASYAVQSKYGDFNKEVHKSGYLAGDKLLPQRVLEQHKLNKDQWEERIQVWHEEHRGMLREDAVLEYL  105 (111)
T ss_dssp             TSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHHHBCCCHHHHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHhCCCCcccccHHHHHHHhcCchHHHhcccccHHHHHHHHHHHHHHcCCcCHHHHHHHHH
Confidence            5567899999999999999999999854  3433211                  1112247999999999999999999


Q ss_pred             HHHHHh
Q psy15968         84 DEFINI   89 (250)
Q Consensus        84 ellekL   89 (250)
                      +++.++
T Consensus       106 ~~~~~L  111 (111)
T d1ef1a1         106 KIAQDL  111 (111)
T ss_dssp             HHHTTS
T ss_pred             HHHhcC
Confidence            998764

>d1mixa1 a.11.2.1 (A:195-308) Talin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Second domain of FERM
family: Second domain of FERM
domain: Talin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=97.62  E-value=0.00016  Score=53.71  Aligned_cols=77  Identities=25%  Similarity=0.354  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhhccccCCCCCC--CCCCcch------------hHHHHHHHHHhcCCCC
Q psy15968          9 KFYAAVSIIQNLPKSGPIQTPLNTMLQFYALYKQATEGPNNQP--KPAFWDI------------VRKTKWDAWTKLGDMS   74 (250)
Q Consensus         9 ~Fe~Av~~Vk~Lp~~G~~~ps~d~kL~LYALYKQAT~GDcn~~--rPg~fD~------------vgRaKWdAWk~LkGMS   74 (250)
                      -|..+-.-|-.    |.+..+.++-+.|-||.-||..||++..  .+.++..            ....=-+.|++++|||
T Consensus        21 ~y~Q~k~dil~----G~~~~~~~~a~~Laal~~Q~e~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~i~~~h~~l~g~s   96 (114)
T d1mixa1          21 LYVQARDDILN----GSHPVSFDKACEFAGYQCQIQFGPHNEQKHKPGFLELKDFLPKEYIKQKGERKIFMAHKNCGNMS   96 (114)
T ss_dssp             HHHHHHHHHHT----TSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGSTTCCHHHHHHHHHHTTTCC
T ss_pred             HHHHHHHHHHC----CCCCCCHHHHHHHHHHHHHHHhCCCCccccccchhhhcccCChhhchHHHHHHHHHHHHHccCCC
Confidence            34455554443    4557899999999999999999999854  3333221            1222257899999999


Q ss_pred             HHHHHHHHHHHHHHh
Q psy15968         75 KEAAMQRYIDEFINI   89 (250)
Q Consensus        75 kEEAm~~YIellekL   89 (250)
                      +.+|+.+|++++.++
T Consensus        97 ~~~A~~~yL~~~~~l  111 (114)
T d1mixa1          97 EIEAKVRYVKLARSL  111 (114)
T ss_dssp             HHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHhcC
Confidence            999999999999875

>d2al6a1 a.11.2.1 (A:131-253) Focal adhesion kinase 1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Second domain of FERM
family: Second domain of FERM
domain: Focal adhesion kinase 1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=94.96  E-value=0.028  Score=41.85  Aligned_cols=62  Identities=10%  Similarity=0.161  Sum_probs=46.5

Q ss_pred             CChHHHHHHHHHhhccccCCCCCCCCC----------Cc---chh-------------HHHHHHHHHhcCCCCHHHHHHH
Q psy15968         28 TPLNTMLQFYALYKQATEGPNNQPKPA----------FW---DIV-------------RKTKWDAWTKLGDMSKEAAMQR   81 (250)
Q Consensus        28 ps~d~kL~LYALYKQAT~GDcn~~rPg----------~f---D~v-------------gRaKWdAWk~LkGMSkEEAm~~   81 (250)
                      .+.|.-++|=||--|+-.||++.....          .+   +++             .+.=-..|++++|||++||+-+
T Consensus        33 ~~~e~Ai~Laal~~Q~~~gd~~~~~~~~~~~~~~~~~~~~L~~flP~~~l~~~~~~~~~k~I~~~~k~~~gls~~eA~~~  112 (123)
T d2al6a1          33 VDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRFFPKSLLDSVKAKTLRKLIQQTFRQFANLNREESILK  112 (123)
T ss_dssp             SCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHTTCGGGTSCHHHHHSSCHHHHHHHHHHHHHTTTTCCHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHhccchhhcccccccchhhhhhhHHhcCChHHHhhcccHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence            678888899999999999999854321          00   110             1112578999999999999999


Q ss_pred             HHHHHHHh
Q psy15968         82 YIDEFINI   89 (250)
Q Consensus        82 YIellekL   89 (250)
                      |++++.++
T Consensus       113 fL~~~~~l  120 (123)
T d2al6a1         113 FFEILSPV  120 (123)
T ss_dssp             HHHHHTTT
T ss_pred             HHHHHHhc
Confidence            99999775